Query 022463
Match_columns 297
No_of_seqs 150 out of 1850
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 05:53:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022463.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022463hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ou5_A Serine hydroxymethyltra 100.0 3.1E-46 1.1E-50 335.4 20.5 284 1-285 71-355 (490)
2 2a7v_A Serine hydroxymethyltra 100.0 8.7E-39 3E-43 297.6 18.9 283 1-284 71-354 (490)
3 1rv3_A Serine hydroxymethyltra 100.0 2.7E-38 9.2E-43 295.5 22.3 283 1-284 61-344 (483)
4 3n0l_A Serine hydroxymethyltra 100.0 1.7E-30 5.9E-35 237.5 21.7 258 2-283 43-300 (417)
5 3h7f_A Serine hydroxymethyltra 100.0 3.5E-30 1.2E-34 238.4 21.2 259 2-284 63-321 (447)
6 2vi8_A Serine hydroxymethyltra 100.0 4.4E-29 1.5E-33 227.2 21.6 259 2-284 41-299 (405)
7 3gbx_A Serine hydroxymethyltra 100.0 3.9E-29 1.3E-33 228.5 18.5 261 2-284 48-308 (420)
8 2dkj_A Serine hydroxymethyltra 100.0 3.2E-28 1.1E-32 221.7 21.3 259 3-284 42-300 (407)
9 3ecd_A Serine hydroxymethyltra 100.0 1.6E-28 5.3E-33 224.9 19.3 260 2-284 50-309 (425)
10 3isl_A Purine catabolism prote 99.9 5.3E-25 1.8E-29 200.8 22.6 242 27-284 41-309 (416)
11 3nnk_A Ureidoglycine-glyoxylat 99.9 4.4E-25 1.5E-29 201.0 21.0 241 28-284 44-309 (411)
12 3e77_A Phosphoserine aminotran 99.9 1.6E-26 5.6E-31 208.2 11.3 259 2-288 30-296 (377)
13 4hvk_A Probable cysteine desul 99.9 4.4E-26 1.5E-30 205.1 13.1 232 26-288 39-279 (382)
14 3lvm_A Cysteine desulfurase; s 99.9 2E-25 6.8E-30 204.3 17.5 232 27-288 65-307 (423)
15 3zrp_A Serine-pyruvate aminotr 99.9 4.3E-25 1.5E-29 199.1 19.1 240 27-284 32-285 (384)
16 2z9v_A Aspartate aminotransfer 99.9 6.9E-25 2.4E-29 198.6 20.3 239 29-284 41-289 (392)
17 3e9k_A Kynureninase; kynurenin 99.9 8.9E-26 3E-30 209.7 12.1 240 33-284 114-375 (465)
18 2huf_A Alanine glyoxylate amin 99.9 2.7E-24 9.3E-29 194.8 21.2 242 27-284 49-302 (393)
19 1kmj_A Selenocysteine lyase; p 99.9 1.1E-24 3.9E-29 197.7 18.5 242 30-288 67-324 (406)
20 3cai_A Possible aminotransfera 99.9 6E-25 2.1E-29 200.1 16.0 230 29-288 68-326 (406)
21 2dr1_A PH1308 protein, 386AA l 99.9 4.8E-24 1.6E-28 192.4 21.8 239 28-284 51-300 (386)
22 3kgw_A Alanine-glyoxylate amin 99.9 3.8E-24 1.3E-28 193.5 21.1 241 28-284 54-306 (393)
23 1vjo_A Alanine--glyoxylate ami 99.9 6E-24 2.1E-28 192.6 21.3 237 28-284 65-314 (393)
24 1t3i_A Probable cysteine desul 99.9 1.1E-24 3.6E-29 198.9 16.3 242 30-288 72-328 (420)
25 1elu_A L-cysteine/L-cystine C- 99.9 2E-24 7E-29 195.2 17.8 243 31-288 60-320 (390)
26 4eb5_A Probable cysteine desul 99.9 7.7E-25 2.6E-29 197.4 14.5 230 28-288 41-279 (382)
27 3vp6_A Glutamate decarboxylase 99.9 5.5E-24 1.9E-28 199.9 20.4 254 20-289 125-413 (511)
28 3ke3_A Putative serine-pyruvat 99.9 3.9E-24 1.3E-28 193.6 18.6 245 26-285 31-295 (379)
29 2ch1_A 3-hydroxykynurenine tra 99.9 1.2E-23 4E-28 190.8 20.5 242 27-284 48-301 (396)
30 3f0h_A Aminotransferase; RER07 99.9 7.9E-24 2.7E-28 190.6 18.7 243 27-285 49-298 (376)
31 2yrr_A Aminotransferase, class 99.9 7.7E-24 2.6E-28 188.6 17.2 235 29-284 32-274 (353)
32 3mad_A Sphingosine-1-phosphate 99.9 2.4E-23 8.1E-28 195.8 19.9 240 23-288 132-400 (514)
33 3vax_A Putative uncharacterize 99.9 3.9E-24 1.3E-28 194.2 13.8 229 28-288 61-306 (400)
34 2bkw_A Alanine-glyoxylate amin 99.9 4E-23 1.4E-27 186.3 20.3 236 32-284 40-301 (385)
35 1eg5_A Aminotransferase; PLP-d 99.9 2.1E-23 7.1E-28 188.0 18.0 227 30-287 44-281 (384)
36 3qm2_A Phosphoserine aminotran 99.9 2.1E-25 7.1E-30 202.0 4.5 231 29-286 71-309 (386)
37 1iug_A Putative aspartate amin 99.9 1.6E-23 5.4E-28 186.8 16.6 232 30-284 34-271 (352)
38 3mc6_A Sphingosine-1-phosphate 99.9 1E-23 3.6E-28 197.3 15.5 247 22-288 99-369 (497)
39 2jis_A Cysteine sulfinic acid 99.9 3.5E-23 1.2E-27 194.8 18.5 252 20-288 138-424 (515)
40 2dgk_A GAD-beta, GADB, glutama 99.9 4.8E-23 1.6E-27 190.7 19.2 247 23-288 74-350 (452)
41 3f9t_A TDC, L-tyrosine decarbo 99.9 1.3E-22 4.5E-27 183.3 21.7 237 26-284 65-328 (397)
42 3hbx_A GAD 1, glutamate decarb 99.9 5.4E-23 1.9E-27 192.8 19.7 249 23-289 88-366 (502)
43 2okj_A Glutamate decarboxylase 99.9 7.8E-23 2.7E-27 191.8 20.2 250 21-288 123-409 (504)
44 3m5u_A Phosphoserine aminotran 99.9 1E-23 3.4E-28 189.3 12.9 254 2-287 22-283 (361)
45 1m32_A 2-aminoethylphosphonate 99.9 8.7E-23 3E-27 182.6 18.7 235 34-284 41-285 (366)
46 3k40_A Aromatic-L-amino-acid d 99.9 2.3E-23 8E-28 194.0 15.2 252 20-288 103-396 (475)
47 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 2E-23 6.7E-28 187.6 13.8 219 26-284 53-288 (371)
48 4e1o_A HDC, histidine decarbox 99.9 6.3E-23 2.1E-27 191.4 16.6 254 20-289 108-404 (481)
49 3ffr_A Phosphoserine aminotran 99.9 8E-23 2.7E-27 182.7 16.3 240 27-289 40-290 (362)
50 3i16_A Aluminum resistance pro 99.9 1.6E-22 5.5E-27 185.3 15.9 171 26-211 73-262 (427)
51 3tqx_A 2-amino-3-ketobutyrate 99.9 1.7E-22 5.9E-27 183.2 16.0 219 25-284 87-318 (399)
52 3jzl_A Putative cystathionine 99.9 1.6E-22 5.5E-27 184.5 15.0 170 26-211 59-245 (409)
53 3a9z_A Selenocysteine lyase; P 99.9 2.4E-23 8.1E-28 191.2 9.5 231 28-286 59-327 (432)
54 3hvy_A Cystathionine beta-lyas 99.9 2.6E-22 9E-27 183.8 15.2 169 27-211 75-262 (427)
55 2z67_A O-phosphoseryl-tRNA(SEC 99.9 1.3E-22 4.4E-27 188.1 13.1 226 27-285 130-370 (456)
56 3frk_A QDTB; aminotransferase, 99.9 1.8E-22 6.3E-27 181.8 12.9 224 23-285 33-268 (373)
57 1b9h_A AHBA synthase, protein 99.9 7.3E-22 2.5E-26 178.8 16.8 226 24-288 36-277 (388)
58 2vyc_A Biodegradative arginine 99.9 8.1E-22 2.8E-26 192.5 18.2 228 35-286 210-466 (755)
59 1c4k_A Protein (ornithine deca 99.9 5E-22 1.7E-26 192.6 16.5 241 26-288 173-443 (730)
60 1qz9_A Kynureninase; kynurenin 99.9 1.2E-22 4.1E-27 185.4 11.2 231 33-284 74-324 (416)
61 1js3_A DDC;, DOPA decarboxylas 99.9 5.3E-22 1.8E-26 185.3 15.0 252 20-288 103-399 (486)
62 2w8t_A SPT, serine palmitoyltr 99.9 1.8E-21 6.3E-26 178.7 18.2 212 26-284 109-335 (427)
63 3ju7_A Putative PLP-dependent 99.9 9.7E-22 3.3E-26 177.9 15.8 222 25-287 35-274 (377)
64 1qgn_A Protein (cystathionine 99.9 2.4E-21 8.4E-26 178.6 18.7 160 25-211 113-279 (445)
65 3dr4_A Putative perosamine syn 99.9 7.1E-22 2.4E-26 179.1 14.4 228 24-284 54-288 (391)
66 2x3l_A ORN/Lys/Arg decarboxyla 99.9 3.7E-22 1.3E-26 184.5 12.8 219 26-280 57-283 (446)
67 2qma_A Diaminobutyrate-pyruvat 99.9 1.3E-21 4.5E-26 183.2 16.3 250 21-288 131-417 (497)
68 2fq6_A Cystathionine beta-lyas 99.9 1.8E-21 6.1E-26 178.2 16.7 161 24-211 80-248 (415)
69 1fc4_A 2-amino-3-ketobutyrate 99.9 2.5E-21 8.4E-26 176.0 17.3 213 34-284 94-319 (401)
70 3kki_A CAI-1 autoinducer synth 99.9 2.3E-21 7.8E-26 176.9 16.3 217 26-285 104-328 (409)
71 1bs0_A Protein (8-amino-7-oxon 99.9 7.3E-21 2.5E-25 171.9 19.4 220 25-285 83-310 (384)
72 3dzz_A Putative pyridoxal 5'-p 99.9 1.3E-21 4.4E-26 176.9 14.1 234 28-288 64-314 (391)
73 3ht4_A Aluminum resistance pro 99.9 1.1E-21 3.9E-26 180.2 13.5 171 32-211 67-251 (431)
74 3n75_A LDC, lysine decarboxyla 99.9 1.6E-21 5.6E-26 187.8 14.8 228 24-286 193-444 (715)
75 3ri6_A O-acetylhomoserine sulf 99.9 2.4E-21 8.3E-26 178.0 15.1 235 24-290 80-325 (430)
76 1gc0_A Methionine gamma-lyase; 99.9 6.7E-21 2.3E-25 173.5 17.5 160 25-211 64-229 (398)
77 3uwc_A Nucleotide-sugar aminot 99.9 2.7E-21 9.1E-26 174.0 13.8 227 22-288 34-273 (374)
78 1wyu_B Glycine dehydrogenase s 99.9 8.4E-21 2.9E-25 176.7 17.3 237 25-284 102-363 (474)
79 3qhx_A Cystathionine gamma-syn 99.9 2.1E-20 7.2E-25 169.9 19.5 218 25-289 65-288 (392)
80 2c0r_A PSAT, phosphoserine ami 99.9 1.1E-21 3.8E-26 176.0 10.9 231 27-285 46-283 (362)
81 3nyt_A Aminotransferase WBPE; 99.9 3.5E-21 1.2E-25 173.3 14.0 219 24-285 33-267 (367)
82 2rfv_A Methionine gamma-lyase; 99.9 1E-20 3.5E-25 172.2 16.8 160 26-211 64-228 (398)
83 3hl2_A O-phosphoseryl-tRNA(SEC 99.9 1E-21 3.5E-26 177.5 9.8 233 33-295 120-371 (501)
84 4dq6_A Putative pyridoxal phos 99.9 7.5E-21 2.6E-25 171.9 15.4 232 28-289 69-319 (391)
85 3l8a_A METC, putative aminotra 99.9 6E-21 2.1E-25 174.9 14.2 236 29-291 99-350 (421)
86 3bc8_A O-phosphoseryl-tRNA(SEC 99.8 2.5E-21 8.4E-26 176.8 11.4 231 26-285 94-338 (450)
87 1c7n_A Cystalysin; transferase 99.8 1.3E-20 4.5E-25 171.0 15.7 234 28-289 68-319 (399)
88 1j32_A Aspartate aminotransfer 99.8 4.1E-20 1.4E-24 167.2 18.8 235 22-288 63-314 (388)
89 2fnu_A Aminotransferase; prote 99.8 1.2E-20 4.2E-25 169.5 14.9 221 26-288 32-271 (375)
90 2oga_A Transaminase; PLP-depen 99.8 6.5E-20 2.2E-24 166.8 19.5 222 25-288 62-298 (399)
91 1gd9_A Aspartate aminotransfer 99.8 6.4E-20 2.2E-24 165.9 19.4 233 22-284 59-308 (389)
92 3op7_A Aminotransferase class 99.8 4.3E-20 1.5E-24 166.3 18.0 232 21-288 58-299 (375)
93 3euc_A Histidinol-phosphate am 99.8 1.1E-19 3.8E-24 163.1 20.3 222 27-288 68-300 (367)
94 2bwn_A 5-aminolevulinate synth 99.8 1.5E-20 5.2E-25 170.8 14.7 221 22-284 87-321 (401)
95 1e5e_A MGL, methionine gamma-l 99.8 6E-20 2.1E-24 167.6 18.6 161 25-211 61-227 (404)
96 1svv_A Threonine aldolase; str 99.8 2.6E-20 8.8E-25 166.2 15.6 227 29-288 48-290 (359)
97 1cs1_A CGS, protein (cystathio 99.8 5.6E-20 1.9E-24 166.5 17.8 159 26-210 52-215 (386)
98 3nra_A Aspartate aminotransfer 99.8 5E-20 1.7E-24 167.4 17.6 238 22-289 74-331 (407)
99 3ndn_A O-succinylhomoserine su 99.8 2.3E-20 7.8E-25 170.8 15.2 161 25-211 80-245 (414)
100 2c81_A Glutamine-2-deoxy-scyll 99.8 1.1E-20 3.6E-25 173.0 12.7 235 34-288 46-290 (418)
101 1o69_A Aminotransferase; struc 99.8 2.4E-19 8.1E-24 162.9 21.6 163 26-210 32-198 (394)
102 2cb1_A O-acetyl homoserine sul 99.8 1E-19 3.5E-24 166.4 19.0 158 26-210 56-218 (412)
103 3cog_A Cystathionine gamma-lya 99.8 4.5E-20 1.5E-24 168.3 16.6 158 26-210 67-230 (403)
104 1u08_A Hypothetical aminotrans 99.8 5.3E-20 1.8E-24 166.4 16.7 231 22-284 63-309 (386)
105 3kax_A Aminotransferase, class 99.8 3.3E-20 1.1E-24 167.2 15.2 232 28-288 61-310 (383)
106 1v2d_A Glutamine aminotransfer 99.8 2.7E-20 9.1E-25 168.1 14.2 227 22-284 57-297 (381)
107 1mdo_A ARNB aminotransferase; 99.8 4.5E-20 1.5E-24 167.1 15.7 232 25-285 38-281 (393)
108 3b8x_A WBDK, pyridoxamine 5-ph 99.8 1.3E-19 4.6E-24 164.1 18.7 235 24-288 32-293 (390)
109 1pff_A Methionine gamma-lyase; 99.8 5.1E-20 1.7E-24 163.1 15.5 153 35-210 3-162 (331)
110 1d2f_A MALY protein; aminotran 99.8 1.1E-19 3.7E-24 164.6 17.8 232 28-288 65-314 (390)
111 3a2b_A Serine palmitoyltransfe 99.8 6.2E-20 2.1E-24 166.6 16.0 216 29-284 87-314 (398)
112 3ly1_A Putative histidinol-pho 99.8 1.4E-19 4.9E-24 161.5 17.9 215 34-284 55-283 (354)
113 3ffh_A Histidinol-phosphate am 99.8 2.8E-19 9.6E-24 160.2 19.8 221 27-289 68-300 (363)
114 1o4s_A Aspartate aminotransfer 99.8 8.2E-20 2.8E-24 165.5 15.8 228 22-284 74-316 (389)
115 2z61_A Probable aspartate amin 99.8 1.3E-19 4.4E-24 162.9 16.6 224 22-284 62-296 (370)
116 1n8p_A Cystathionine gamma-lya 99.8 5.6E-20 1.9E-24 167.2 14.3 156 26-210 55-220 (393)
117 3nmy_A Xometc, cystathionine g 99.8 1.1E-19 3.9E-24 165.4 16.3 221 24-290 65-291 (400)
118 2o0r_A RV0858C (N-succinyldiam 99.8 8.6E-20 3E-24 166.5 15.4 232 21-284 57-306 (411)
119 3get_A Histidinol-phosphate am 99.8 1.4E-19 4.9E-24 162.2 16.4 216 29-284 68-297 (365)
120 2ctz_A O-acetyl-L-homoserine s 99.8 1.5E-19 5.1E-24 165.8 16.5 158 26-209 58-221 (421)
121 1xi9_A Putative transaminase; 99.8 1.2E-19 4E-24 165.3 15.4 234 22-288 74-327 (406)
122 3dyd_A Tyrosine aminotransfera 99.8 1.1E-19 3.9E-24 166.8 15.3 237 22-288 92-347 (427)
123 1wyu_A Glycine dehydrogenase ( 99.8 2.3E-20 7.8E-25 172.0 10.4 237 25-288 103-367 (438)
124 2o1b_A Aminotransferase, class 99.8 2E-19 7E-24 163.8 16.4 231 22-284 81-326 (404)
125 3acz_A Methionine gamma-lyase; 99.8 1.1E-19 3.9E-24 164.9 14.5 160 25-210 58-222 (389)
126 1b5p_A Protein (aspartate amin 99.8 3.5E-19 1.2E-23 161.2 17.5 230 22-284 64-310 (385)
127 1v72_A Aldolase; PLP-dependent 99.8 1.3E-19 4.6E-24 161.5 14.4 224 32-288 45-287 (356)
128 2po3_A 4-dehydrase; external a 99.8 2.6E-19 8.8E-24 164.1 16.6 222 25-288 51-284 (424)
129 3h14_A Aminotransferase, class 99.8 3.5E-19 1.2E-23 161.3 17.3 229 22-286 64-304 (391)
130 1w23_A Phosphoserine aminotran 99.8 1.2E-20 4.2E-25 168.7 7.4 230 26-287 44-284 (360)
131 1bw0_A TAT, protein (tyrosine 99.8 1.6E-19 5.5E-24 164.8 14.8 240 22-288 71-336 (416)
132 1yiz_A Kynurenine aminotransfe 99.8 1.7E-19 6E-24 165.3 14.5 234 21-284 72-335 (429)
133 3cq5_A Histidinol-phosphate am 99.8 1.9E-18 6.5E-23 155.4 20.8 220 29-283 72-300 (369)
134 2aeu_A Hypothetical protein MJ 99.8 3.2E-19 1.1E-23 161.1 15.4 217 29-284 57-284 (374)
135 2x5d_A Probable aminotransfera 99.8 4.4E-19 1.5E-23 161.8 16.0 231 22-284 71-318 (412)
136 3jtx_A Aminotransferase; NP_28 99.8 1.2E-18 4E-23 157.9 18.6 231 22-286 62-319 (396)
137 1fg7_A Histidinol phosphate am 99.8 1E-18 3.5E-23 156.5 17.3 226 21-286 54-288 (356)
138 2zc0_A Alanine glyoxylate tran 99.8 2E-18 6.9E-23 157.0 19.0 232 22-287 71-326 (407)
139 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.8 1.3E-18 4.5E-23 160.1 17.8 164 25-211 61-235 (437)
140 1ibj_A CBL, cystathionine beta 99.8 2.1E-18 7.3E-23 159.9 19.3 157 31-210 134-295 (464)
141 1iay_A ACC synthase 2, 1-amino 99.8 2.2E-18 7.5E-23 158.0 19.2 234 21-284 78-343 (428)
142 3lws_A Aromatic amino acid bet 99.8 2.4E-19 8.1E-24 160.3 12.4 229 18-288 39-279 (357)
143 2gb3_A Aspartate aminotransfer 99.8 4E-19 1.4E-23 162.0 14.0 229 22-284 75-317 (409)
144 3tcm_A Alanine aminotransferas 99.8 3.1E-18 1.1E-22 160.4 20.3 239 18-288 126-407 (500)
145 1jg8_A L-ALLO-threonine aldola 99.8 4.2E-19 1.4E-23 158.0 13.7 172 21-210 33-217 (347)
146 2dou_A Probable N-succinyldiam 99.8 4.7E-19 1.6E-23 159.6 14.0 232 21-284 58-303 (376)
147 3fdb_A Beta C-S lyase, putativ 99.8 1.7E-18 6E-23 155.6 17.6 226 29-288 61-302 (377)
148 2r2n_A Kynurenine/alpha-aminoa 99.8 8.2E-18 2.8E-22 154.2 21.8 235 22-287 74-344 (425)
149 3piu_A 1-aminocyclopropane-1-c 99.8 3.2E-18 1.1E-22 157.3 18.8 233 21-284 81-348 (435)
150 3g0t_A Putative aminotransfera 99.8 1.5E-18 5.3E-23 159.2 16.3 246 22-284 78-354 (437)
151 3ezs_A Aminotransferase ASPB; 99.8 2.7E-18 9.3E-23 154.4 17.4 227 21-282 54-301 (376)
152 3b46_A Aminotransferase BNA3; 99.8 1.2E-18 4.2E-23 160.8 15.3 234 21-284 90-350 (447)
153 3pj0_A LMO0305 protein; struct 99.8 1.9E-18 6.5E-23 154.5 15.0 228 20-288 42-281 (359)
154 2zyj_A Alpha-aminodipate amino 99.8 1.2E-18 4.1E-23 158.1 13.2 221 27-285 75-313 (397)
155 3fvs_A Kynurenine--oxoglutarat 99.8 1.7E-18 5.7E-23 158.3 14.2 236 21-284 62-327 (422)
156 1lc5_A COBD, L-threonine-O-3-p 99.8 5.5E-18 1.9E-22 152.0 17.0 217 28-288 61-291 (364)
157 3aow_A Putative uncharacterize 99.8 8.1E-18 2.8E-22 155.4 17.7 231 22-285 114-365 (448)
158 3e2y_A Kynurenine-oxoglutarate 99.8 4.6E-18 1.6E-22 154.7 15.7 235 22-284 57-320 (410)
159 3p1t_A Putative histidinol-pho 99.8 1.5E-17 5E-22 147.3 18.3 213 26-284 51-268 (337)
160 3ele_A Amino transferase; RER0 99.8 1.2E-17 4E-22 151.5 17.1 176 22-212 72-266 (398)
161 3hdo_A Histidinol-phosphate am 99.8 5.1E-18 1.7E-22 152.0 14.2 209 29-284 68-284 (360)
162 3ihj_A Alanine aminotransferas 99.8 2.1E-17 7.1E-22 154.7 18.3 238 19-288 122-406 (498)
163 3ftb_A Histidinol-phosphate am 99.8 2.6E-17 8.8E-22 147.1 17.4 217 27-288 62-290 (361)
164 1vp4_A Aminotransferase, putat 99.7 7.4E-18 2.5E-22 154.5 13.4 226 25-284 84-334 (425)
165 2ez2_A Beta-tyrosinase, tyrosi 99.7 4.4E-17 1.5E-21 150.5 18.5 168 21-210 70-271 (456)
166 2fyf_A PSAT, phosphoserine ami 99.7 7.9E-18 2.7E-22 152.9 13.2 232 29-288 77-321 (398)
167 3ppl_A Aspartate aminotransfer 99.7 3.6E-17 1.2E-21 149.9 17.2 174 18-211 70-276 (427)
168 3qgu_A LL-diaminopimelate amin 99.7 8.2E-18 2.8E-22 155.1 12.6 244 19-284 104-364 (449)
169 2x5f_A Aspartate_tyrosine_phen 99.7 3.8E-17 1.3E-21 149.8 17.0 237 21-282 83-352 (430)
170 2eh6_A Acoat, acetylornithine 99.7 2.4E-17 8.3E-22 148.1 15.1 220 26-285 70-310 (375)
171 3ruy_A Ornithine aminotransfer 99.7 5E-17 1.7E-21 147.1 16.5 221 26-284 78-322 (392)
172 3b1d_A Betac-S lyase; HET: PLP 99.6 2.4E-19 8.1E-24 162.6 0.0 232 28-288 68-318 (392)
173 3if2_A Aminotransferase; YP_26 99.7 2.7E-17 9.3E-22 151.3 13.6 182 21-211 78-292 (444)
174 3ei9_A LL-diaminopimelate amin 99.7 5.2E-17 1.8E-21 149.0 15.2 244 21-284 93-352 (432)
175 3ez1_A Aminotransferase MOCR f 99.7 2.1E-16 7.1E-21 144.5 18.1 172 20-211 63-269 (423)
176 1vef_A Acetylornithine/acetyl- 99.7 6.5E-17 2.2E-21 146.5 14.2 220 32-285 89-325 (395)
177 1ax4_A Tryptophanase; tryptoph 99.7 4.3E-16 1.5E-20 144.2 18.6 170 21-209 71-279 (467)
178 1s0a_A Adenosylmethionine-8-am 99.7 1.3E-15 4.4E-20 139.6 21.4 221 35-284 91-350 (429)
179 3rq1_A Aminotransferase class 99.7 3E-16 1E-20 143.2 16.8 236 21-284 75-348 (418)
180 2oqx_A Tryptophanase; lyase, p 99.7 1.8E-16 6.2E-21 146.8 15.5 178 20-211 68-281 (467)
181 3t18_A Aminotransferase class 99.7 1.9E-16 6.5E-21 144.3 14.5 235 21-284 74-346 (413)
182 3g7q_A Valine-pyruvate aminotr 99.7 1.9E-16 6.7E-21 144.2 13.4 179 21-211 70-266 (417)
183 3f6t_A Aspartate aminotransfer 99.7 5.9E-16 2E-20 146.0 16.6 174 24-211 136-330 (533)
184 3asa_A LL-diaminopimelate amin 99.7 4.9E-16 1.7E-20 141.2 14.5 227 22-284 71-315 (400)
185 1uu1_A Histidinol-phosphate am 99.7 3.7E-16 1.2E-20 138.6 12.2 204 28-284 58-272 (335)
186 3meb_A Aspartate aminotransfer 99.7 3E-15 1E-19 138.2 18.7 239 19-284 87-371 (448)
187 1yaa_A Aspartate aminotransfer 99.7 8.5E-16 2.9E-20 140.0 14.7 236 22-285 69-345 (412)
188 1sff_A 4-aminobutyrate aminotr 99.7 2E-15 7E-20 137.9 16.8 228 25-283 83-337 (426)
189 3fkd_A L-threonine-O-3-phospha 99.7 1.2E-15 4.1E-20 135.9 14.9 211 29-289 53-272 (350)
190 4f4e_A Aromatic-amino-acid ami 99.7 6.3E-16 2.1E-20 141.4 13.3 239 21-284 87-355 (420)
191 3gju_A Putative aminotransfera 99.7 6.5E-15 2.2E-19 136.4 20.2 238 32-292 97-380 (460)
192 3i4j_A Aminotransferase, class 99.7 4.2E-15 1.4E-19 136.2 18.7 237 31-290 73-346 (430)
193 3d6k_A Putative aminotransfera 99.7 1.4E-15 4.9E-20 139.1 15.3 171 20-211 70-274 (422)
194 3fsl_A Aromatic-amino-acid ami 99.7 1.3E-15 4.4E-20 137.9 14.8 241 21-285 65-334 (397)
195 3n5m_A Adenosylmethionine-8-am 99.7 2E-14 7E-19 132.6 22.7 239 31-293 92-374 (452)
196 3nx3_A Acoat, acetylornithine 99.6 4.2E-15 1.4E-19 134.6 17.5 227 33-291 81-330 (395)
197 3a8u_X Omega-amino acid--pyruv 99.6 7.4E-15 2.5E-19 135.4 18.5 224 34-284 97-368 (449)
198 1z7d_A Ornithine aminotransfer 99.6 1.6E-14 5.3E-19 132.8 19.6 216 35-284 112-352 (433)
199 2eo5_A 419AA long hypothetical 99.6 1.1E-14 3.6E-19 133.2 18.4 216 34-284 90-348 (419)
200 4adb_A Succinylornithine trans 99.6 4.1E-15 1.4E-19 134.9 15.2 217 26-284 81-322 (406)
201 1ajs_A Aspartate aminotransfer 99.6 3.4E-15 1.2E-19 135.9 14.5 232 22-285 70-345 (412)
202 2ay1_A Aroat, aromatic amino a 99.6 2.7E-15 9.3E-20 135.7 13.6 232 22-285 65-330 (394)
203 7aat_A Aspartate aminotransfer 99.6 9.4E-15 3.2E-19 132.5 17.2 177 19-208 64-264 (401)
204 3dxv_A Alpha-amino-epsilon-cap 99.6 1.2E-14 4.1E-19 133.5 17.4 233 30-288 86-347 (439)
205 4eu1_A Mitochondrial aspartate 99.6 1.3E-14 4.5E-19 132.0 17.0 236 19-285 72-345 (409)
206 3tfu_A Adenosylmethionine-8-am 99.6 2.7E-14 9.1E-19 132.2 18.5 233 34-292 122-390 (457)
207 3dod_A Adenosylmethionine-8-am 99.6 3.1E-14 1.1E-18 131.3 18.7 233 33-292 90-369 (448)
208 4a6r_A Omega transaminase; tra 99.6 7.4E-15 2.5E-19 135.9 14.5 236 31-292 95-375 (459)
209 3l44_A Glutamate-1-semialdehyd 99.6 5.6E-14 1.9E-18 128.9 20.0 214 37-283 102-342 (434)
210 2oat_A Ornithine aminotransfer 99.6 2E-14 7E-19 132.3 16.8 219 26-284 118-363 (439)
211 2q7w_A Aspartate aminotransfer 99.6 8.7E-15 3E-19 132.3 14.1 232 22-285 65-333 (396)
212 2ord_A Acoat, acetylornithine 99.6 2.5E-14 8.5E-19 129.6 15.5 214 33-284 85-321 (397)
213 3i5t_A Aminotransferase; pyrid 99.6 3.7E-13 1.3E-17 125.1 23.4 233 34-292 101-380 (476)
214 2pb2_A Acetylornithine/succiny 99.6 1.3E-14 4.5E-19 132.7 12.8 216 33-284 102-340 (420)
215 3hmu_A Aminotransferase, class 99.6 5.2E-14 1.8E-18 130.8 16.9 233 33-292 102-377 (472)
216 1zod_A DGD, 2,2-dialkylglycine 99.6 1.4E-13 4.7E-18 126.2 19.0 223 34-283 89-343 (433)
217 3fq8_A Glutamate-1-semialdehyd 99.6 1.4E-13 4.7E-18 126.0 18.6 216 31-282 93-338 (427)
218 3k28_A Glutamate-1-semialdehyd 99.6 2.7E-13 9.3E-18 124.2 19.7 210 37-283 100-339 (429)
219 4e77_A Glutamate-1-semialdehyd 99.5 6.4E-13 2.2E-17 121.6 20.9 216 35-283 98-340 (429)
220 2epj_A Glutamate-1-semialdehyd 99.5 4.2E-13 1.4E-17 123.1 18.2 218 33-284 99-344 (434)
221 4ffc_A 4-aminobutyrate aminotr 99.5 4.4E-13 1.5E-17 123.9 18.4 240 31-292 108-376 (453)
222 2cjg_A L-lysine-epsilon aminot 99.5 2.7E-13 9.3E-18 125.1 16.9 217 37-283 108-370 (449)
223 2cy8_A D-phgat, D-phenylglycin 99.5 3.4E-13 1.2E-17 124.4 16.2 221 28-284 95-344 (453)
224 2zy4_A L-aspartate beta-decarb 99.5 2.2E-13 7.6E-18 128.6 15.0 168 30-211 143-332 (546)
225 3oks_A 4-aminobutyrate transam 99.5 2.9E-13 1E-17 125.0 15.1 237 32-292 106-378 (451)
226 2e7u_A Glutamate-1-semialdehyd 99.5 1.6E-12 5.5E-17 118.8 18.9 219 31-284 93-340 (424)
227 3bwn_A AT1G70560, L-tryptophan 99.5 7.5E-14 2.6E-18 126.5 9.4 224 18-287 55-304 (391)
228 3k7y_A Aspartate aminotransfer 99.5 3.4E-12 1.2E-16 116.2 19.7 178 18-208 64-263 (405)
229 4ao9_A Beta-phenylalanine amin 99.5 1.5E-12 5.2E-17 119.7 17.1 222 37-293 134-374 (454)
230 1ohv_A 4-aminobutyrate aminotr 99.4 1.4E-11 4.9E-16 114.3 16.6 139 121-284 241-394 (472)
231 2yky_A Beta-transaminase; tran 99.0 6.3E-14 2.2E-18 129.5 0.0 215 34-284 144-375 (465)
232 2hox_A ALLIIN lyase 1; cystein 99.3 1.8E-12 6.3E-17 118.8 7.3 215 28-288 102-340 (427)
233 4atq_A 4-aminobutyrate transam 99.3 7.7E-10 2.6E-14 101.9 21.7 232 37-293 114-383 (456)
234 4h51_A Aspartate aminotransfer 99.1 3.7E-10 1.3E-14 103.0 10.2 243 19-284 80-351 (420)
235 4e3q_A Pyruvate transaminase; 99.0 2.2E-08 7.5E-13 92.6 20.6 231 37-293 118-395 (473)
236 4a0g_A Adenosylmethionine-8-am 98.8 2.7E-08 9.4E-13 98.0 13.1 153 123-292 577-757 (831)
237 4gqr_A Pancreatic alpha-amylas 62.5 3.6 0.00012 37.2 2.4 28 142-169 71-98 (496)
238 2ab1_A Hypothetical protein; H 59.3 28 0.00097 25.1 6.3 50 119-169 48-97 (122)
239 2yxb_A Coenzyme B12-dependent 57.3 17 0.00057 27.7 5.1 50 119-168 55-107 (161)
240 3bzy_B ESCU; auto cleavage pro 53.8 7.9 0.00027 26.1 2.3 18 151-168 30-47 (83)
241 1ht6_A AMY1, alpha-amylase iso 53.6 6.8 0.00023 34.8 2.6 28 142-169 63-90 (405)
242 1lwj_A 4-alpha-glucanotransfer 53.1 6.9 0.00024 35.1 2.6 27 143-169 65-91 (441)
243 1g94_A Alpha-amylase; beta-alp 53.1 6.4 0.00022 35.4 2.4 28 142-169 59-86 (448)
244 3bh4_A Alpha-amylase; calcium, 53.1 7 0.00024 35.5 2.6 27 143-169 74-100 (483)
245 1y80_A Predicted cobalamin bin 52.8 27 0.00094 27.6 5.9 51 119-169 125-179 (210)
246 1n8f_A DAHP synthetase; (beta/ 52.7 16 0.00056 31.7 4.7 41 133-174 226-272 (350)
247 1wpc_A Glucan 1,4-alpha-maltoh 52.3 7.3 0.00025 35.4 2.6 27 143-169 78-104 (485)
248 1ud2_A Amylase, alpha-amylase; 52.2 7.4 0.00025 35.3 2.6 27 143-169 76-102 (480)
249 1hvx_A Alpha-amylase; hydrolas 51.6 7.6 0.00026 35.7 2.6 28 142-169 76-103 (515)
250 1mxg_A Alpha amylase; hyperthe 50.3 8.3 0.00028 34.6 2.6 28 142-169 81-108 (435)
251 3nvt_A 3-deoxy-D-arabino-heptu 50.1 39 0.0013 29.7 6.9 54 120-173 260-323 (385)
252 3ghf_A Septum site-determining 49.7 35 0.0012 24.5 5.5 46 120-165 25-78 (120)
253 1gcy_A Glucan 1,4-alpha-maltot 49.2 9.6 0.00033 35.1 2.9 28 142-169 87-114 (527)
254 2guy_A Alpha-amylase A; (beta- 49.1 8.7 0.0003 34.8 2.6 29 141-169 91-119 (478)
255 4aie_A Glucan 1,6-alpha-glucos 48.7 9.2 0.00032 35.1 2.8 27 143-169 75-101 (549)
256 1xrs_B D-lysine 5,6-aminomutas 48.3 54 0.0019 27.2 7.1 51 119-169 166-223 (262)
257 2lbw_A H/ACA ribonucleoprotein 48.0 47 0.0016 23.8 6.0 44 122-166 25-68 (121)
258 3noy_A 4-hydroxy-3-methylbut-2 47.5 14 0.00049 32.1 3.5 49 118-167 91-139 (366)
259 1wza_A Alpha-amylase A; hydrol 47.3 8.3 0.00029 35.1 2.2 27 143-169 77-103 (488)
260 2vt1_B Surface presentation of 46.6 12 0.0004 25.8 2.3 18 151-168 30-47 (93)
261 3t7y_A YOP proteins translocat 46.6 11 0.00038 26.2 2.2 19 151-169 45-63 (97)
262 3kts_A Glycerol uptake operon 46.3 27 0.00094 27.5 4.7 43 121-167 18-60 (192)
263 2aaa_A Alpha-amylase; glycosid 45.9 9.8 0.00034 34.5 2.4 29 141-169 91-119 (484)
264 2dh2_A 4F2 cell-surface antige 45.8 9.6 0.00033 34.1 2.3 27 143-169 77-103 (424)
265 1vs1_A 3-deoxy-7-phosphoheptul 45.6 49 0.0017 27.6 6.5 58 117-174 152-220 (276)
266 3c01_E Surface presentation of 45.0 12 0.00042 26.0 2.2 18 151-168 30-47 (98)
267 2z1k_A (NEO)pullulanase; hydro 44.5 10 0.00035 34.3 2.3 27 143-169 92-118 (475)
268 2rdx_A Mandelate racemase/muco 44.2 30 0.001 30.2 5.3 51 118-168 245-295 (379)
269 3edf_A FSPCMD, cyclomaltodextr 43.1 12 0.00041 35.1 2.6 25 145-169 196-220 (601)
270 1jae_A Alpha-amylase; glycosid 43.1 8.3 0.00028 34.9 1.5 27 143-169 70-96 (471)
271 1qho_A Alpha-amylase; glycosid 43.0 12 0.00041 35.8 2.6 28 142-169 102-129 (686)
272 3dhu_A Alpha-amylase; structur 42.8 11 0.00036 33.9 2.1 26 144-169 80-105 (449)
273 2xzm_U Ribosomal protein L7AE 42.8 58 0.002 23.6 5.7 44 122-166 29-72 (126)
274 1zco_A 2-dehydro-3-deoxyphosph 42.7 46 0.0016 27.5 5.9 54 121-174 142-205 (262)
275 1zja_A Trehalulose synthase; s 42.6 13 0.00045 34.4 2.8 26 144-169 76-101 (557)
276 1sjd_A N-acylamino acid racema 42.5 33 0.0011 29.8 5.2 48 119-166 242-289 (368)
277 1cyg_A Cyclodextrin glucanotra 42.0 13 0.00043 35.6 2.6 28 142-169 106-133 (680)
278 2wc7_A Alpha amylase, catalyti 41.5 9.9 0.00034 34.6 1.7 27 143-169 98-124 (488)
279 1m53_A Isomaltulose synthase; 41.5 11 0.00038 35.0 2.1 26 144-169 89-114 (570)
280 1uok_A Oligo-1,6-glucosidase; 40.7 12 0.0004 34.8 2.1 26 144-169 75-100 (558)
281 1d3c_A Cyclodextrin glycosyltr 40.7 14 0.00049 35.2 2.8 28 142-169 110-137 (686)
282 3bmv_A Cyclomaltodextrin gluca 40.7 14 0.00046 35.4 2.6 28 142-169 111-138 (683)
283 1j0h_A Neopullulanase; beta-al 40.7 14 0.00047 34.6 2.6 26 144-169 219-244 (588)
284 3aj7_A Oligo-1,6-glucosidase; 40.3 14 0.00048 34.6 2.6 26 144-169 84-109 (589)
285 3bc9_A AMYB, alpha amylase, ca 40.1 13 0.00046 34.8 2.4 26 144-169 205-230 (599)
286 3qtp_A Enolase 1; glycolysis, 40.1 51 0.0018 29.6 6.0 46 121-166 333-378 (441)
287 3j21_Z 50S ribosomal protein L 39.6 54 0.0018 22.4 5.0 43 122-166 20-62 (99)
288 4aef_A Neopullulanase (alpha-a 39.4 13 0.00043 35.3 2.1 26 144-169 282-307 (645)
289 1wzl_A Alpha-amylase II; pullu 39.4 14 0.00048 34.5 2.4 26 144-169 216-241 (585)
290 1r0m_A N-acylamino acid racema 39.2 40 0.0014 29.3 5.3 48 119-166 248-295 (375)
291 1ccw_A Protein (glutamate muta 39.0 30 0.001 25.4 3.8 49 120-168 41-92 (137)
292 1ua7_A Alpha-amylase; beta-alp 38.9 11 0.00039 33.4 1.7 28 142-169 69-96 (422)
293 2zic_A Dextran glucosidase; TI 38.5 13 0.00043 34.4 1.9 26 144-169 75-100 (543)
294 3i4k_A Muconate lactonizing en 38.3 49 0.0017 28.9 5.7 50 118-167 253-302 (383)
295 3q45_A Mandelate racemase/muco 38.2 42 0.0014 29.2 5.2 51 118-168 243-293 (368)
296 3cpq_A 50S ribosomal protein L 38.1 56 0.0019 22.9 5.0 43 122-166 26-68 (110)
297 2ze0_A Alpha-glucosidase; TIM 37.7 15 0.00051 34.1 2.3 26 144-169 75-100 (555)
298 3v7e_A Ribosome-associated pro 37.6 38 0.0013 22.4 3.8 45 122-168 16-60 (82)
299 2ovl_A Putative racemase; stru 36.9 33 0.0011 29.9 4.3 51 118-168 250-300 (371)
300 1g5a_A Amylosucrase; glycosylt 36.7 17 0.00059 34.3 2.6 25 145-169 160-184 (628)
301 1o60_A 2-dehydro-3-deoxyphosph 36.6 53 0.0018 27.7 5.4 52 121-172 144-204 (292)
302 4aee_A Alpha amylase, catalyti 36.6 15 0.0005 35.2 2.1 26 144-169 308-333 (696)
303 2qkf_A 3-deoxy-D-manno-octulos 36.5 56 0.0019 27.3 5.5 51 121-171 141-200 (280)
304 1ea9_C Cyclomaltodextrinase; h 36.4 15 0.00053 34.2 2.2 49 121-169 170-240 (583)
305 1w41_A 50S ribosomal protein L 36.3 62 0.0021 22.2 4.9 43 122-166 21-63 (101)
306 2ale_A SNU13, NHP2/L7AE family 36.1 55 0.0019 24.0 4.8 44 122-166 37-80 (134)
307 2fym_A Enolase; RNA degradosom 36.1 59 0.002 29.0 5.9 50 118-167 319-368 (431)
308 1vr6_A Phospho-2-dehydro-3-deo 35.8 70 0.0024 27.7 6.1 55 120-174 224-288 (350)
309 3sz8_A 2-dehydro-3-deoxyphosph 35.3 61 0.0021 27.2 5.5 41 132-172 161-206 (285)
310 2xw6_A MGS, methylglyoxal synt 35.3 52 0.0018 24.2 4.5 46 124-169 65-113 (134)
311 3czg_A Sucrose hydrolase; (alp 34.9 16 0.00056 34.6 2.1 25 145-169 153-177 (644)
312 1kko_A 3-methylaspartate ammon 34.6 52 0.0018 29.1 5.3 50 118-167 309-358 (413)
313 1chr_A Chloromuconate cycloiso 34.0 56 0.0019 28.3 5.3 49 119-167 248-296 (370)
314 3ezx_A MMCP 1, monomethylamine 34.0 55 0.0019 26.1 4.9 51 119-169 129-185 (215)
315 3b1s_B Flagellar biosynthetic 40.2 8.6 0.00029 26.2 0.0 18 151-168 30-47 (87)
316 1vmd_A MGS, methylglyoxal synt 33.7 85 0.0029 24.3 5.6 46 124-169 89-137 (178)
317 2i2x_B MTAC, methyltransferase 33.3 67 0.0023 26.3 5.4 50 120-169 161-212 (258)
318 1kcz_A Beta-methylaspartase; b 33.2 59 0.002 28.7 5.4 49 119-167 310-358 (413)
319 2ps2_A Putative mandelate race 33.2 30 0.001 30.1 3.4 51 118-168 247-297 (371)
320 2gm2_A Conserved hypothetical 32.9 60 0.0021 23.7 4.5 49 119-169 51-99 (132)
321 2pgw_A Muconate cycloisomerase 32.8 28 0.00095 30.5 3.1 50 119-168 250-299 (384)
322 2qdd_A Mandelate racemase/muco 32.7 33 0.0011 29.9 3.6 50 119-168 246-295 (378)
323 2ioj_A Hypothetical protein AF 32.6 46 0.0016 24.2 3.9 38 124-166 65-103 (139)
324 1tks_A 3,4-dihydroxy-2-butanon 32.6 73 0.0025 25.3 5.2 35 132-166 158-194 (204)
325 3fs2_A 2-dehydro-3-deoxyphosph 32.2 60 0.002 27.5 4.9 52 120-172 166-225 (298)
326 1xbi_A 50S ribosomal protein L 32.2 72 0.0025 22.7 4.8 45 122-167 34-78 (120)
327 3mio_A DHBP synthase, 3,4-dihy 31.8 93 0.0032 24.7 5.7 35 132-166 157-194 (206)
328 2jli_A YSCU, YOP proteins tran 31.7 25 0.00087 25.5 2.2 18 151-168 74-91 (123)
329 1wuf_A Hypothetical protein LI 31.7 61 0.0021 28.4 5.2 49 119-167 261-309 (393)
330 3dip_A Enolase; structural gen 31.6 64 0.0022 28.5 5.4 52 118-169 273-324 (410)
331 3on1_A BH2414 protein; structu 31.5 79 0.0027 21.6 4.8 44 122-167 23-66 (101)
332 2bhu_A Maltooligosyltrehalose 31.2 23 0.00078 33.3 2.4 25 145-169 190-214 (602)
333 3zss_A Putative glucanohydrola 31.1 24 0.00082 33.8 2.6 25 145-169 318-342 (695)
334 2p8b_A Mandelate racemase/muco 31.0 37 0.0013 29.4 3.6 49 119-167 246-294 (369)
335 1rlg_A 50S ribosomal protein L 31.0 93 0.0032 22.0 5.2 45 122-167 32-76 (119)
336 1rvk_A Isomerase/lactonizing e 30.9 32 0.0011 30.0 3.2 50 118-167 259-309 (382)
337 1b93_A Protein (methylglyoxal 30.7 69 0.0024 24.1 4.6 46 124-169 73-121 (152)
338 1w6t_A Enolase; bacterial infe 30.6 49 0.0017 29.6 4.4 47 120-166 333-379 (444)
339 3qn3_A Enolase; structural gen 30.3 51 0.0018 29.3 4.4 45 122-166 317-361 (417)
340 3bzs_A ESCU; auto cleavage pro 30.3 27 0.00093 25.9 2.2 19 151-169 84-102 (137)
341 3jva_A Dipeptide epimerase; en 30.3 38 0.0013 29.3 3.5 51 118-168 242-292 (354)
342 3v7q_A Probable ribosomal prot 30.0 92 0.0031 21.3 4.9 44 122-167 24-67 (101)
343 3aie_A Glucosyltransferase-SI; 29.7 27 0.00094 34.2 2.7 26 144-169 689-714 (844)
344 2nwr_A 2-dehydro-3-deoxyphosph 29.6 72 0.0025 26.4 5.0 40 131-172 144-187 (267)
345 1nu0_A Hypothetical protein YQ 29.5 1E+02 0.0034 22.7 5.3 52 118-169 38-97 (138)
346 2okt_A OSB synthetase, O-succi 29.4 57 0.002 27.9 4.5 51 118-168 222-272 (342)
347 3otr_A Enolase; structural gen 29.2 56 0.0019 29.4 4.4 46 121-166 336-381 (452)
348 4e84_A D-beta-D-heptose 7-phos 29.1 1.3E+02 0.0043 25.7 6.8 37 133-169 186-222 (352)
349 1m7x_A 1,4-alpha-glucan branch 29.0 26 0.00089 32.9 2.4 25 145-169 202-226 (617)
350 2qgy_A Enolase from the enviro 28.9 40 0.0014 29.6 3.5 52 118-169 253-304 (391)
351 2al1_A Enolase 1, 2-phospho-D- 28.9 53 0.0018 29.4 4.3 46 121-166 326-371 (436)
352 1nu5_A Chloromuconate cycloiso 28.8 38 0.0013 29.4 3.3 50 119-168 248-297 (370)
353 1vli_A Spore coat polysacchari 28.7 3E+02 0.01 24.1 11.8 84 117-204 165-261 (385)
354 2pa6_A Enolase; glycolysis, ly 28.4 54 0.0018 29.2 4.3 45 122-166 321-365 (427)
355 3u5e_c L32, RP73, YL38, 60S ri 28.4 1.1E+02 0.0037 21.2 5.0 43 122-166 27-69 (105)
356 3ff4_A Uncharacterized protein 28.3 90 0.0031 22.3 4.8 38 123-166 73-110 (122)
357 2jlj_A YSCU, YOP proteins tran 28.3 31 0.001 25.8 2.2 19 151-169 83-101 (144)
358 2qde_A Mandelate racemase/muco 28.0 37 0.0013 29.8 3.1 50 119-168 249-298 (397)
359 3eez_A Putative mandelate race 27.9 42 0.0015 29.3 3.5 50 118-167 245-294 (378)
360 2fc3_A 50S ribosomal protein L 27.8 93 0.0032 22.3 4.8 44 122-166 33-76 (124)
361 1mdl_A Mandelate racemase; iso 27.7 26 0.00089 30.3 2.0 51 118-168 248-298 (359)
362 4a18_G RPL30; ribosome, eukary 27.6 1.2E+02 0.004 20.9 5.2 43 122-166 27-69 (104)
363 3m07_A Putative alpha amylase; 27.5 32 0.0011 32.4 2.7 25 145-169 200-224 (618)
364 1g57_A DHBP synthase, 3,4-dihy 27.4 1.1E+02 0.0037 24.5 5.4 35 132-166 166-201 (217)
365 3tml_A 2-dehydro-3-deoxyphosph 27.4 69 0.0024 26.9 4.5 38 134-172 166-207 (288)
366 1tkk_A Similar to chloromucona 27.4 40 0.0014 29.2 3.2 49 119-167 247-295 (366)
367 2poz_A Putative dehydratase; o 27.1 32 0.0011 30.2 2.5 49 119-167 259-307 (392)
368 2hzg_A Mandelate racemase/muco 27.1 45 0.0015 29.3 3.5 49 119-167 256-304 (401)
369 2zc8_A N-acylamino acid racema 27.1 42 0.0014 29.1 3.3 48 119-166 241-288 (369)
370 3ucq_A Amylosucrase; thermosta 26.9 29 0.00098 33.0 2.3 27 143-169 156-182 (655)
371 2akz_A Gamma enolase, neural; 26.9 60 0.0021 29.1 4.3 46 121-166 323-368 (439)
372 1vc3_B L-aspartate-alpha-decar 26.9 95 0.0032 21.3 4.3 13 69-81 53-65 (96)
373 1vq8_F 50S ribosomal protein L 26.8 1E+02 0.0034 21.9 4.8 45 122-167 34-78 (120)
374 4dxk_A Mandelate racemase / mu 26.6 55 0.0019 28.8 4.0 50 119-168 270-319 (400)
375 2aif_A Ribosomal protein L7A; 26.3 80 0.0027 23.1 4.2 44 122-166 46-89 (135)
376 3k8k_A Alpha-amylase, SUSG; al 26.2 35 0.0012 32.5 2.8 25 145-169 104-128 (669)
377 1ji1_A Alpha-amylase I; beta/a 25.9 32 0.0011 32.5 2.4 26 144-169 235-264 (637)
378 1x92_A APC5045, phosphoheptose 25.6 2.2E+02 0.0076 21.6 11.6 40 124-166 106-145 (199)
379 2oz8_A MLL7089 protein; struct 25.4 96 0.0033 27.0 5.3 43 121-167 254-296 (389)
380 1snn_A DHBP synthase, 3,4-dihy 25.3 97 0.0033 25.0 4.8 35 132-166 177-212 (227)
381 3o85_A Ribosomal protein L7AE; 25.3 1.1E+02 0.0038 21.8 4.8 44 122-167 36-80 (122)
382 2gl5_A Putative dehydratase pr 25.2 35 0.0012 30.1 2.4 50 119-168 278-327 (410)
383 3ozy_A Putative mandelate race 25.1 40 0.0014 29.6 2.8 50 119-168 256-305 (389)
384 3igs_A N-acetylmannosamine-6-p 24.8 2.1E+02 0.0072 22.8 6.9 48 121-169 90-137 (232)
385 3b0z_B Flagellar biosynthetic 30.5 16 0.00053 26.2 0.0 19 151-169 30-48 (114)
386 3mwc_A Mandelate racemase/muco 24.6 53 0.0018 28.9 3.5 50 119-168 264-313 (400)
387 3i6i_A Putative leucoanthocyan 24.6 2.7E+02 0.0092 23.2 8.0 46 120-166 70-116 (346)
388 2cyj_A Hypothetical protein PH 24.4 49 0.0017 23.7 2.7 52 119-172 47-98 (118)
389 3vgf_A Malto-oligosyltrehalose 24.4 29 0.001 32.1 1.8 25 145-169 165-189 (558)
390 3fcp_A L-Ala-D/L-Glu epimerase 24.4 66 0.0022 28.1 4.0 49 119-167 253-301 (381)
391 4dwd_A Mandelate racemase/muco 24.3 44 0.0015 29.4 2.9 51 118-169 250-300 (393)
392 2o56_A Putative mandelate race 24.2 33 0.0011 30.3 2.1 49 119-167 275-323 (407)
393 3iz5_f 60S ribosomal protein L 24.2 1.3E+02 0.0043 21.2 4.8 44 122-167 31-74 (112)
394 3fv9_G Mandelate racemase/muco 24.1 54 0.0018 28.7 3.4 49 119-167 252-300 (386)
395 2gdq_A YITF; mandelate racemas 24.0 43 0.0015 29.3 2.7 49 119-167 245-293 (382)
396 3i6e_A Muconate cycloisomerase 23.7 59 0.002 28.4 3.6 49 119-167 252-300 (385)
397 3q58_A N-acetylmannosamine-6-p 23.7 2.3E+02 0.0078 22.6 6.9 47 122-169 91-137 (229)
398 1wue_A Mandelate racemase/muco 23.7 60 0.0021 28.3 3.7 49 119-167 261-309 (386)
399 3rr1_A GALD, putative D-galact 23.7 44 0.0015 29.5 2.8 51 118-168 237-287 (405)
400 3ttq_A Dextransucrase; (beta/a 23.7 44 0.0015 33.6 2.9 26 144-169 909-934 (1108)
401 3dgb_A Muconate cycloisomerase 23.4 59 0.002 28.4 3.5 49 119-167 254-302 (382)
402 3aml_A OS06G0726400 protein; s 23.3 38 0.0013 32.8 2.4 25 145-169 248-272 (755)
403 1iv8_A Maltooligosyl trehalose 23.2 36 0.0012 32.7 2.2 27 143-169 61-87 (720)
404 3k1d_A 1,4-alpha-glucan-branch 23.1 39 0.0013 32.5 2.4 25 145-169 310-334 (722)
405 3sho_A Transcriptional regulat 23.0 1.2E+02 0.0041 22.8 5.0 26 141-166 94-119 (187)
406 4h41_A Putative alpha-L-fucosi 23.0 3.2E+02 0.011 23.4 8.0 70 96-167 29-119 (340)
407 3gd6_A Muconate cycloisomerase 22.9 67 0.0023 28.2 3.8 50 119-168 247-296 (391)
408 3sbf_A Mandelate racemase / mu 22.9 47 0.0016 29.2 2.8 52 118-169 260-311 (401)
409 3qld_A Mandelate racemase/muco 22.3 66 0.0022 28.2 3.6 49 119-167 249-297 (388)
410 3w01_A Heptaprenylglyceryl pho 22.2 1.4E+02 0.0049 24.1 5.3 52 113-166 18-69 (235)
411 3vzx_A Heptaprenylglyceryl pho 22.1 1.9E+02 0.0066 23.2 6.1 47 120-167 19-65 (228)
412 3pzt_A Endoglucanase; alpha/be 22.1 52 0.0018 28.0 2.9 51 119-169 68-126 (327)
413 1uhe_A Aspartate 1-decarboxyla 21.8 1.2E+02 0.0042 20.8 4.1 14 130-143 73-86 (97)
414 1pqh_A Aspartate 1-decarboxyla 21.7 1.7E+02 0.0058 21.6 5.0 14 130-143 116-129 (143)
415 3r0u_A Enzyme of enolase super 21.6 67 0.0023 28.0 3.5 50 119-168 248-297 (379)
416 4e4u_A Mandalate racemase/muco 21.5 62 0.0021 28.6 3.3 49 119-167 261-309 (412)
417 3qvo_A NMRA family protein; st 21.5 2.9E+02 0.0099 21.5 9.7 91 54-163 26-118 (236)
418 3uj2_A Enolase 1; enzyme funct 21.5 71 0.0024 28.7 3.7 46 121-166 344-389 (449)
419 3tqp_A Enolase; energy metabol 21.2 73 0.0025 28.5 3.7 46 121-166 318-363 (428)
420 4e8g_A Enolase, mandelate race 21.1 59 0.002 28.5 3.1 51 118-168 266-316 (391)
421 4e5t_A Mandelate racemase / mu 20.9 69 0.0023 28.2 3.5 49 119-167 268-316 (404)
422 3jyw_G 60S ribosomal protein L 20.9 76 0.0026 22.5 3.0 44 122-166 30-73 (113)
423 2ptz_A Enolase; lyase, glycoly 20.8 93 0.0032 27.7 4.3 46 121-166 327-372 (432)
424 3sjn_A Mandelate racemase/muco 20.8 43 0.0015 29.2 2.1 51 119-169 254-304 (374)
425 2og9_A Mandelate racemase/muco 20.7 36 0.0012 29.9 1.6 50 119-168 267-316 (393)
426 3klk_A Glucansucrase; native f 20.6 51 0.0017 33.1 2.7 25 145-169 743-767 (1039)
427 3vup_A Beta-1,4-mannanase; TIM 20.6 61 0.0021 26.7 3.0 20 149-168 91-110 (351)
428 2zad_A Muconate cycloisomerase 20.5 53 0.0018 28.1 2.6 49 119-168 244-292 (345)
429 1k4i_A 3,4-dihydroxy-2-butanon 20.4 1.1E+02 0.0037 24.8 4.1 35 132-166 166-212 (233)
430 7a3h_A Endoglucanase; hydrolas 20.4 60 0.0021 27.1 2.9 51 120-170 44-102 (303)
No 1
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=100.00 E-value=3.1e-46 Score=335.44 Aligned_cols=284 Identities=64% Similarity=1.066 Sum_probs=223.9
Q ss_pred CccccccccccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEe
Q 022463 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMAL 80 (297)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~ 80 (297)
+|+++|.|.|+|+||+||.|||++.++++++|..++++..++||+++.+|+|+|.+.||+.+|++++.++++|||+|+..
T Consensus 71 ~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A~w~VNVQP~SGs~AN~avy~All~PGD~ilg~ 150 (490)
T 3ou5_A 71 LEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGL 150 (490)
T ss_dssp HHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCC-CCCEECB
T ss_pred HHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCccccCCCCCcCCHHHHHHHHHHHHcCCCCEEEec
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcccccccccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhc
Q 022463 81 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQ 160 (297)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~ 160 (297)
+..|++|+++.+......+.+.|..++.+++++|++++.+|+|.+++...+++|++|+++.|.|....|++++++||++.
T Consensus 151 ~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~~IDyd~~~~~A~~~kPklIi~G~SaY~r~id~~~~reIAd~v 230 (490)
T 3ou5_A 151 DLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEV 230 (490)
T ss_dssp C----------------------------CBCEETTTTEECHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHH
T ss_pred ccCCCCcccccccCCCcccccccccccccccccCCCCCcccHHHHHHHHhhcCCCeEEECCccCccccCHHHHHHHHhhc
Confidence 99999999988765555677888889999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEehhhhcccccccCCCCCCCCccEEEecCCccCCCCCceEEEEecCchhh-ccCCccchhhHHHHhhhcccCCCC
Q 022463 161 KAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEI-NKQGKEVFYDYEEKINQAVFPGLQ 239 (297)
Q Consensus 161 g~~livD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~gG~i~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~ 239 (297)
|+++++|.||.+|.+..+..+.|+.++|++++|+||+|.||+||+|+++++.+.. ...+.....++.++++...+|+.+
T Consensus 231 GA~Lm~DmAHiaGLVA~g~~psP~~~ADvVTtTTHKTLrGPrGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~q 310 (490)
T 3ou5_A 231 KAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQ 310 (490)
T ss_dssp TCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSSTTCSCSCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTC
T ss_pred ccEEEechhhhhhhhcccccCCccccceEEeccccccccCCCceEEEeccccccccccccchhHHHHHHHHHhhcCcccc
Confidence 9999999999999999999999999999999999999999999999999865321 223333334678889999999999
Q ss_pred CCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCC
Q 022463 240 GGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSE 285 (297)
Q Consensus 240 ~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~ 285 (297)
|+|..+.++|++.|+.+.++. .+....++..+.++.|.+.|.+..
T Consensus 311 ggp~~h~IAAkAVaf~Ea~~p-~fk~Ya~qVv~NAkaLA~~L~~~G 355 (490)
T 3ou5_A 311 GGPHNHAIAAVAVALKQACTP-MFREYSLQVLKNARAMADALLERG 355 (490)
T ss_dssp SSCCHHHHHHHHHHHHHHHSH-HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccchHHHHHHHHHHHHHHHhH-hHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999998887 677788888888888888886654
No 2
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=100.00 E-value=8.7e-39 Score=297.59 Aligned_cols=283 Identities=64% Similarity=1.071 Sum_probs=200.3
Q ss_pred CccccccccccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEe
Q 022463 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMAL 80 (297)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~ 80 (297)
+|+|++.+.|.|++|++|+++|++.+..+++|+.++++++++||+++++|++.++++||+.+|.+++.++++|||+|+++
T Consensus 71 ~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~ 150 (490)
T 2a7v_A 71 LEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGL 150 (490)
T ss_dssp HHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC-
T ss_pred HHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcCCCcccCceEEeCCchHHHHHHHHHHHcCCCCEeccc
Confidence 47899999999999999999999999999999999999999999998765556777899999998999999999999999
Q ss_pred cCCCCCcccccccccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhc
Q 022463 81 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQ 160 (297)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~ 160 (297)
..+|++++.+........+.+.|..++.++++++++++.+|++++++.+.+++|++|+++.+++|...|+++|.++|++|
T Consensus 151 ~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD~d~le~~l~~~~~klIi~~~s~~~~~~dl~~i~~ia~~~ 230 (490)
T 2a7v_A 151 DLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEV 230 (490)
T ss_dssp ------------------------------CCBCTTTCSBCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHT
T ss_pred CccccccccchhhhcchhHHHcCCeEEEEecccccccCCcCHHHHHHHHhhcCCcEEEEcCCCCCCcccHHHHHHHHHHc
Confidence 99999887655433223345566656667777776788999999999998668999988777889889999999999999
Q ss_pred CCEEEEehhhhcccccccCCCCCCCCccEEEecCCccCCCCCceEEEEecCchhh-ccCCccchhhHHHHhhhcccCCCC
Q 022463 161 KAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEI-NKQGKEVFYDYEEKINQAVFPGLQ 239 (297)
Q Consensus 161 g~~livD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~gG~i~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~ 239 (297)
|+++++|++|+.|.+..+..+.++.++|++++|+||+|.||+||+++++++.... ...|.....++.++++...+++.+
T Consensus 231 g~~livD~Ah~~glv~~g~~~~~~~~aDiv~~S~hK~l~Gp~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~q 310 (490)
T 2a7v_A 231 KAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQ 310 (490)
T ss_dssp TCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCSCSCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTC
T ss_pred CCEEEEccccccccccCCcCCCCCCCCCEEEECCcccCccccchheeeccchhcccccccchhhHHHHHHHHHHhcccCC
Confidence 9999999999988877666666666899999999999999999999999853100 000111111345566666677778
Q ss_pred CCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 240 GGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 240 ~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
++|+.+.++++.+|+.++.+. .++...++..+++++|.+.|++.
T Consensus 311 ggp~~~~iaAla~Al~~~~~~-~~~~~~~~~~~na~~L~~~L~~~ 354 (490)
T 2a7v_A 311 GGPHNHAIAAVAVALKQACTP-MFREYSLQVLKNARAMADALLER 354 (490)
T ss_dssp CSCCHHHHHHHHHHHHHHHSH-HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCchHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHc
Confidence 899999999999999988766 66778888888999999988875
No 3
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=100.00 E-value=2.7e-38 Score=295.53 Aligned_cols=283 Identities=61% Similarity=1.016 Sum_probs=237.8
Q ss_pred CccccccccccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEe
Q 022463 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMAL 80 (297)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~ 80 (297)
+|+|++.+.|.|.+|+|+.++|++.+..+++++.+++++++++|+++++|+++|+++||+++|++++.++++|||+|+++
T Consensus 61 ~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~sGs~an~~~~~all~pGD~Vl~~ 140 (483)
T 1rv3_A 61 LEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGL 140 (483)
T ss_dssp HHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHTCTTCEEEEE
T ss_pred HHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEECCcHHHHHHHHHHhcCCCCEEEEe
Confidence 36788999999999999999999999999999999999999999987655456999999998987799999999999999
Q ss_pred cCCCCCcccccccccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhc
Q 022463 81 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQ 160 (297)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~ 160 (297)
+.+|++++.+++.....++.+.|..++.++++++++++.+|+++|++.+++.+|++|+++++|++.+.|+++|.++|+++
T Consensus 141 ~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~~~iD~d~le~~i~~~~tklIi~~~sn~~~~~dl~~i~~ia~~~ 220 (483)
T 1rv3_A 141 DLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPKLIIAGTSCYSRNLDYGRLRKIADEN 220 (483)
T ss_dssp CGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHT
T ss_pred cCccCcCcchhhhhcccCcccccceEEEEECccccCCCcCCHHHHHHHHhhcCCcEEEEeCCcCCCcCCHHHHHHHHHHc
Confidence 99999999988776666777777667778777776778999999999998449999999777777889999999999999
Q ss_pred CCEEEEehhhhcccccccCCCCCCCCccEEEecCCccCCCCCceEEEEecCch-hhccCCccchhhHHHHhhhcccCCCC
Q 022463 161 KAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVK-EINKQGKEVFYDYEEKINQAVFPGLQ 239 (297)
Q Consensus 161 g~~livD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~gG~i~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~ 239 (297)
|+++++|++|+.|.++.+..++|+.++|++++|+||+|.||+||+++++++.. .+...|....+++.+.++...+++..
T Consensus 221 g~~livD~ah~~g~~~~~~~~~p~~~~div~~s~~K~l~GprgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~ 300 (483)
T 1rv3_A 221 GAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHKTLRGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQ 300 (483)
T ss_dssp TCEEEEECTTTHHHHHHTSSCCGGGTCSEEEEESSGGGCCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTC
T ss_pred CCEEEEEccchhcccccCCCCCCCCCCcEEEecCcccCCCCCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCccc
Confidence 99999999999999888777776668999999999999999999999998642 11111211111244455555566678
Q ss_pred CCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 240 GGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 240 ~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
|+++.+.++++.+|++.+.+. +++.+.++..++++++.+.|++.
T Consensus 301 g~~~~~~iaal~~Al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 344 (483)
T 1rv3_A 301 GGPHNHAIAGVAVALKQAMTP-EFKEYQRQVVANCRALSAALVEL 344 (483)
T ss_dssp CSCCHHHHHHHHHHHHHHTSH-HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCccHHHHHHHHHHHHHHhCh-hHHHHHHHHHHHHHHHHHHHHhc
Confidence 899999999999999998877 88999999999999999999876
No 4
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.97 E-value=1.7e-30 Score=237.45 Aligned_cols=258 Identities=44% Similarity=0.741 Sum_probs=199.8
Q ss_pred ccccccccccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEec
Q 022463 2 QAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~ 81 (297)
++|...+.+.|..+++++++|.+....+++++.+++++++++|++++ .+++++|++++..++.+++++||+|+++.
T Consensus 43 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~----~i~~~sGt~a~~~~~~~~~~~gd~vl~~~ 118 (417)
T 3n0l_A 43 EVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCKFA----NVQPNSGSQANQGVYAALINPGDKILGMD 118 (417)
T ss_dssp HHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEE----ECCCSSHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred HHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhCCCCc----ceEeccHHHHHHHHHHHhcCCCCEEEecc
Confidence 45666777888888999999998899999999999999999999874 38889998888888899999999999999
Q ss_pred CCCCCcccccccccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcC
Q 022463 82 LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK 161 (297)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g 161 (297)
.+|+++...+... ...|..+..++++.+ +++.+|++++++.+++.+|++|+++.+|+|...|+++|.++|++||
T Consensus 119 ~~~~~~~~~~~~~-----~~~g~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~~G~~~~l~~i~~l~~~~~ 192 (417)
T 3n0l_A 119 LSHGGHLTHGAKV-----SSSGKMYESCFYGVE-LDGRIDYEKVREIAKKEKPKLIVCGASAYARVIDFAKFREIADEIG 192 (417)
T ss_dssp C---------------------CCSEEEEECCC-TTSSCCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHT
T ss_pred cccccccchhhhh-----hhhcceeeeEeccCC-CCCCcCHHHHHHHHHhcCCeEEEECCcccCccCCHHHHHHHHHHcC
Confidence 9888775544322 222333455666676 6788999999999984489999986556799999999999999999
Q ss_pred CEEEEehhhhcccccccCCCCCCCCccEEEecCCccCCCCCceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCC
Q 022463 162 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGG 241 (297)
Q Consensus 162 ~~livD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t 241 (297)
+++|+|++|+.|....+..+.++..+|++++|+||+|+||+||+++++++ ++.+.+.....++..++
T Consensus 193 ~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~G~~~~~~~-------------~~~~~~~~~~~~~~~~~ 259 (417)
T 3n0l_A 193 AYLFADIAHIAGLVVAGEHPSPFPYAHVVSSTTHKTLRGPRGGIIMTNDE-------------ELAKKINSAIFPGIQGG 259 (417)
T ss_dssp CEEEEECTTTHHHHHTTSSCCCTTTCSEEEEESSTTTCSCSCEEEEESCH-------------HHHHHHHHHHTTTTCSS
T ss_pred CEEEEECccchhhhhcccCCCccccceEEEeeCccccCCCCeeEEEECCH-------------HHHHHHhhhhCCcccCC
Confidence 99999999988877555444444468999999999999999999999842 34555554444555677
Q ss_pred CchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccC
Q 022463 242 PHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNN 283 (297)
Q Consensus 242 ~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~ 283 (297)
++...++++.+++....+. +++...++..++.+++.+.|++
T Consensus 260 ~~~~~~aa~~~a~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~ 300 (417)
T 3n0l_A 260 PLMHVIAAKAVGFKFNLSD-EWKVYAKQVRTNAQVLANVLMD 300 (417)
T ss_dssp CCHHHHHHHHHHHHHHTSH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHHh
Confidence 7888888888888887666 7788888888888999988877
No 5
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.97 E-value=3.5e-30 Score=238.42 Aligned_cols=259 Identities=44% Similarity=0.692 Sum_probs=206.1
Q ss_pred ccccccccccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEec
Q 022463 2 QAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~ 81 (297)
|+|...+.|.|..++++++++.+....+.+++.+++++++++|++.. .++++||+.++..++.++++|||+|+++.
T Consensus 63 ~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~~~~----~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~ 138 (447)
T 3h7f_A 63 QAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGAEFA----NVQPHSGAQANAAVLHALMSPGERLLGLD 138 (447)
T ss_dssp HHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEE----ECCCSSHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred HHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcCCCce----EEEeCCHHHHHHHHHHHhcCCCCEEEecC
Confidence 56777777899989999999999999999998888999999999863 35578888888888999999999999999
Q ss_pred CCCCCcccccccccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcC
Q 022463 82 LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK 161 (297)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g 161 (297)
.+|++++..... +.+.|..+..++++++++++.+|++++++++++.++++|+++.++++...++++|.++|++||
T Consensus 139 ~~~~~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~i~~~~~~~~~~~~l~~i~~l~~~~g 213 (447)
T 3h7f_A 139 LANGGHLTHGMR-----LNFSGKLYENGFYGVDPATHLIDMDAVRATALEFRPKVIIAGWSAYPRVLDFAAFRSIADEVG 213 (447)
T ss_dssp GGGTCCGGGTCT-----TSHHHHSSEEEEECCCTTTCSCCHHHHHHHHHHHCCSEEEEECSSCCSCCCHHHHHHHHHHHT
T ss_pred cccccccchhhh-----hhhcCCeeEEEEcCcCcccCCcCHHHHHHHHHhcCCeEEEEcCCCCCCccCHHHHHHHHHHcC
Confidence 888875443321 122233345566667666788999999999976589998885555566669999999999999
Q ss_pred CEEEEehhhhcccccccCCCCCCCCccEEEecCCccCCCCCceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCC
Q 022463 162 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGG 241 (297)
Q Consensus 162 ~~livD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t 241 (297)
+++|+|++|+.|....+....++.++|++++|+||+|+||+||+++.+++ +.+.+.....+...++
T Consensus 214 ~lli~Dea~~~g~~~~g~~~~~~~~~di~~~s~sK~l~G~~gG~i~~~~~--------------~~~~l~~~~~~~~~~~ 279 (447)
T 3h7f_A 214 AKLLVDMAHFAGLVAAGLHPSPVPHADVVSTTVHKTLGGGRSGLIVGKQQ--------------YAKAINSAVFPGQQGG 279 (447)
T ss_dssp CEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSGGGCCCSCEEEEECGG--------------GHHHHHHHHTTTTCSS
T ss_pred CEEEEECCchhhhhcCCCCCCCCCCCcEEEecCCcCCCCCCeEEEEECHH--------------HHHHHhhhcCCcccCC
Confidence 99999999988766554444444578999999999999999999999883 4455555445556677
Q ss_pred CchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 242 PHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 242 ~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
++...++++.+++..+.+. +++...++..++.+++.+.|++.
T Consensus 280 ~~~~~~~a~~~a~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 321 (447)
T 3h7f_A 280 PLMHVIAGKAVALKIAATP-EFADRQRRTLSGARIIADRLMAP 321 (447)
T ss_dssp CCHHHHHHHHHHHHHTTSH-HHHHHHHHHHHHHHHHHHHHTSH
T ss_pred ccHHHHHHHHHHHHHhhCH-HHHHHHHHHHHHHHHHHHHHHhc
Confidence 7878888888888887766 67888888888999999888776
No 6
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.97 E-value=4.4e-29 Score=227.22 Aligned_cols=259 Identities=44% Similarity=0.771 Sum_probs=197.2
Q ss_pred ccccccccccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEec
Q 022463 2 QAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~ 81 (297)
|+|...+.+.+..++++++++.+.+...++++.+++++++++|++++ .+++++|+.++..++.+++++||+|+++.
T Consensus 41 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~~~~----~i~~~sGt~a~~~a~~~~~~~gd~Vl~~~ 116 (405)
T 2vi8_A 41 EAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEHA----NVQPHSGAQANMAVYFTVLEHGDTVLGMN 116 (405)
T ss_dssp HHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEE----ECCCSSHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred HHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCce----EEEecCcHHHHHHHHHHhcCCCCEEEEec
Confidence 34444554555556677777777777889999999999999999863 36678998788878888899999999999
Q ss_pred CCCCCcccccccccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcC
Q 022463 82 LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK 161 (297)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g 161 (297)
.+|++........ ...|..+..++++.+++++.+|++++++.+++.+|++|+++++++|...|+++|.++|++||
T Consensus 117 ~~~~~~~~~~~~~-----~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~ 191 (405)
T 2vi8_A 117 LSHGGHLTHGSPV-----NFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAAAAAYPRIIDFAKFREIADEVG 191 (405)
T ss_dssp GGGTCCTTTTCTT-----SHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHT
T ss_pred ccccchhcccchh-----hhccceeEEEecccccccCCcCHHHHHHHHHhcCCeEEEEeCCCCCccCCHHHHHHHHHHcC
Confidence 8887775432211 12222233455555545678999999999986589998887778898889999999999999
Q ss_pred CEEEEehhhhcccccccCCCCCCCCccEEEecCCccCCCCCceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCC
Q 022463 162 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGG 241 (297)
Q Consensus 162 ~~livD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t 241 (297)
+++|+|++|+.|..+.+....++..+|++++|+||+++||.||++++++ ++.+.+.....+...++
T Consensus 192 ~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~~~g~~gG~~~~~~--------------~~~~~l~~~~~~~~~~~ 257 (405)
T 2vi8_A 192 AYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGGMILCQE--------------QFAKQIDKAIFPGIQGG 257 (405)
T ss_dssp CEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCCCSCEEEEECH--------------HHHHHHHHHHTTTTCSS
T ss_pred CEEEEEccccccccccCcCCCccccCCEEEEeccccCCCCCCeEEEEcH--------------HHHHHHHhhhcccccCC
Confidence 9999999999776655444333336899999999999888889999886 34444443333344567
Q ss_pred CchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 242 PHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 242 ~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
++...++++.++++.+.+. +++++.++.+++.+++.+.|+++
T Consensus 258 ~~~~~~aa~~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 299 (405)
T 2vi8_A 258 PLMHVIAAKAVAFGEALQD-DFKAYAKRVVDNAKRLASALQNE 299 (405)
T ss_dssp CCHHHHHHHHHHHHHHHSH-HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHHhC
Confidence 7778888888899887766 88899999999999999999876
No 7
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.96 E-value=3.9e-29 Score=228.52 Aligned_cols=261 Identities=46% Similarity=0.764 Sum_probs=182.5
Q ss_pred ccccccccccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEec
Q 022463 2 QAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~ 81 (297)
|+|...+.+.+..++++.+++.+....+.+++.+++++++++|++++ .+++++|++++..++.+++++||+|+++.
T Consensus 48 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~----~v~~~sGs~a~~~a~~~~~~~gd~v~~~~ 123 (420)
T 3gbx_A 48 QAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGADYA----NVQPHSGSQANFAVYTALLQPGDTVLGMN 123 (420)
T ss_dssp HHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHTCSEE----ECCCSSHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred HHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhCCCCc----eeEecCcHHHHHHHHHHhcCCCCEEEecc
Confidence 45666666777778888888888888888999999999999999874 37789998888878899999999999999
Q ss_pred CCCCCcccccccccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcC
Q 022463 82 LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK 161 (297)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g 161 (297)
.+|+++...+.... ..|..+..++++.+ .++.+|++++++++++.++++|+++.+|+|...|+++|.++|++||
T Consensus 124 ~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~l~~l~~~~~ 197 (420)
T 3gbx_A 124 LAQGGHLTHGSPVN-----FSGKLYNIVPYGID-ESGKIDYDEMAKLAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIG 197 (420)
T ss_dssp EC-----------------CHHHHSEEEEEEEC-TTCSCCHHHHHHHHHHHCCSEEEECCTTCCSCCCHHHHHHHHHHTT
T ss_pred hhhcceeccchhhh-----hcccceeEEeccCC-ccCCcCHHHHHHHHHhcCCeEEEEecCccCCccCHHHHHHHHHHcC
Confidence 99888654433221 22333445555666 6678999999999987679999986567788899999999999999
Q ss_pred CEEEEehhhhcccccccCCCCCCCCccEEEecCCccCCCCCceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCC
Q 022463 162 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGG 241 (297)
Q Consensus 162 ~~livD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t 241 (297)
+++|+|++|+.|....+.....+..+|++++|+||+++||+||+++.++... .+.+.+....+++..++
T Consensus 198 ~~li~De~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~gg~~~~~~~~~-----------~~~~~~~~~~~~~~~~~ 266 (420)
T 3gbx_A 198 AYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILAKGGDE-----------ELYKKLNSAVFPSAQGG 266 (420)
T ss_dssp CEEEEECTTTHHHHHTTSSCCSTTTSSEEEEESSGGGCSCSCEEEEESSCCH-----------HHHHHHHHHHC----CC
T ss_pred CEEEEECCcchhceecccCCcccccCCEEEeecccCCCCCCceEEEEcCCcH-----------HHHHHhhhhcCCCCCCC
Confidence 9999999998877654443433446899999999999999999999887310 23334444444544567
Q ss_pred CchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 242 PHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 242 ~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
++...++++..++..+.+. +++++.++..++.+++.+.|++.
T Consensus 267 ~~~~~~~a~~~a~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 308 (420)
T 3gbx_A 267 PLMHVIAGKAVALKEAMEP-EFKVYQQQVAKNAKAMVEVFLNR 308 (420)
T ss_dssp CCHHHHHHHHHHHHHTTSH-HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cchhHHHHHHHHHHHHHhH-hHHHHHHHHHHHHHHHHHHHHhc
Confidence 7788888888888777656 77888888999999999888763
No 8
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.96 E-value=3.2e-28 Score=221.66 Aligned_cols=259 Identities=44% Similarity=0.753 Sum_probs=193.9
Q ss_pred cccccccccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEecC
Q 022463 3 AVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDL 82 (297)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~~ 82 (297)
+|...+.+.+..+++..+++.+.+....+++.+++++++++|++++ .+++++|++++..++.+++++||+|+++..
T Consensus 42 a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~~~~----~i~~~sGt~a~~~~~~~~~~~gd~Vl~~~~ 117 (407)
T 2dkj_A 42 AVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAAWA----NVQPHSGSQANMAVYMALMEPGDTLMGMDL 117 (407)
T ss_dssp HHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEE----ECCCSSHHHHHHHHHHHHCCTTCEEEEECG
T ss_pred HHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCCCcc----eEEecchHHHHHHHHHHhcCCCCEEEEecc
Confidence 4444444444445666665556666678888888999999999864 377889998887788888999999999998
Q ss_pred CCCCcccccccccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCC
Q 022463 83 PHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKA 162 (297)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~ 162 (297)
+|+++..+..... ..|..+..++++++++++.+|++++++.+++.+|++|+++.+++|...|+++|.++|++||+
T Consensus 118 ~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~p~~~~~~~l~~i~~l~~~~~~ 192 (407)
T 2dkj_A 118 AAGGHLTHGSRVN-----FSGKLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVIVAGASAYPRFWDFKAFREIADEVGA 192 (407)
T ss_dssp GGTCCGGGTCTTS-----HHHHHSEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTC
T ss_pred cccCccchHHHHH-----hcCceEEEEecCCCcccCccCHHHHHHHHhhcCCeEEEEeccccCCCCCHHHHHHHHHHcCC
Confidence 8887753333222 22332344555555456789999999999855899999954556888899999999999999
Q ss_pred EEEEehhhhcccccccCCCCCCCCccEEEecCCccCCCCCceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCC
Q 022463 163 IMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGP 242 (297)
Q Consensus 163 ~livD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~ 242 (297)
++|+|++|+.|..+.+....++...|++++|+||+|+|+++|+++++++ ++.+.+.....++..+++
T Consensus 193 ~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~G~~~~~~~-------------~~~~~l~~~~~~~~~~~~ 259 (407)
T 2dkj_A 193 YLVVDMAHFAGLVAAGLHPNPLPYAHVVTSTTHKTLRGPRGGLILSNDP-------------ELGKRIDKLIFPGIQGGP 259 (407)
T ss_dssp EEEEECTTTHHHHHTTCSCCCTTTCSEEEEESSGGGCCCSCEEEEESCH-------------HHHHHHHHHHTTTTCSSC
T ss_pred EEEEEccccccccccCccCCccccccEEEEeccccCCCCCceEEEECCH-------------HHHHHHHhhhcccccCCC
Confidence 9999999998776655433223358999999999999999999999832 344444443334445667
Q ss_pred chHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 243 HNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 243 ~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
+...++++.++++.+... +++++.++.+++.+++.+.|++.
T Consensus 260 ~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 300 (407)
T 2dkj_A 260 LEHVIAGKAVAFFEALQP-EFKEYSRLVVENAKRLAEELARR 300 (407)
T ss_dssp CHHHHHHHHHHHHHHHSH-HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHhC
Confidence 777777888899887666 88899999999999999999876
No 9
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.96 E-value=1.6e-28 Score=224.86 Aligned_cols=260 Identities=44% Similarity=0.684 Sum_probs=180.6
Q ss_pred ccccccccccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEec
Q 022463 2 QAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~ 81 (297)
|+|...+.+.|..++++.+++.+....+.+++.+++++++++|++.. .+++++|++++..++.+++++||+|+++.
T Consensus 50 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~----~v~~~~Gs~a~~~al~~~~~~gd~Vi~~~ 125 (425)
T 3ecd_A 50 DAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLFNAGHA----NVQPHSGAQANGAVMLALAKPGDTVLGMS 125 (425)
T ss_dssp HHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHHTCSEE----ECCCSSHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred HHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHhCCCCc----eeecCchHHHHHHHHHHccCCCCEEEEcc
Confidence 45666666778788888888887777778888888999999998863 25577888888878888899999999999
Q ss_pred CCCCCcccccccccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcC
Q 022463 82 LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK 161 (297)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g 161 (297)
.+|+++...... ....|..+..++++.+++++.+|++++++.+++.+|++|++..+++|...++++|.++|++||
T Consensus 126 ~~~~~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~ 200 (425)
T 3ecd_A 126 LDAGGHLTHGAK-----PALSGKWFNALQYGVSRDTMLIDYDQVEALAQQHKPSLIIAGFSAYPRKLDFARFRAIADSVG 200 (425)
T ss_dssp C-----------------------CEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEEECSCCCSCCCHHHHHHHHHHHT
T ss_pred cccccceecchh-----hhhcccceeeeecCCCcccCccCHHHHHHHHhhcCCcEEEEccccCCCcCCHHHHHHHHHHcC
Confidence 888774322221 112333355566667666788999999999985589999995456799999999999999999
Q ss_pred CEEEEehhhhcccccccCCCCCCCCccEEEecCCccCCCCCceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCC
Q 022463 162 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGG 241 (297)
Q Consensus 162 ~~livD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t 241 (297)
+++|+|++|+.|....+....++..+|++++|+||+|+||+||+++.+++ .+.+.+.....++..++
T Consensus 201 ~~li~De~~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~g~~~~~~~-------------~~~~~~~~~~~~~~~~~ 267 (425)
T 3ecd_A 201 AKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLRGPRGGFVLTNDE-------------EIAKKINSAVFPGLQGG 267 (425)
T ss_dssp CEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCCCSCEEEEESCH-------------HHHHHHHHHHC-----C
T ss_pred CEEEEECcChHhhhhcccccCchhcCcEEEecCCcccCCCCcEEEEeCCH-------------HHHHHHHhhhCccccCC
Confidence 99999999988877554433333358999999999999999999998863 34444444444444567
Q ss_pred CchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 242 PHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 242 ~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
++....+++..++..+... +++.+.++..++.+++.+.|++.
T Consensus 268 ~~~~~~~a~~~a~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 309 (425)
T 3ecd_A 268 PLMHVIAGKAVAFGEALTD-DFKTYIDRVLANAQALGDVLKAG 309 (425)
T ss_dssp CCHHHHHHHHHHHHHHTSH-HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhC
Confidence 7777888888888777666 77888999999999999988874
No 10
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.94 E-value=5.3e-25 Score=200.80 Aligned_cols=242 Identities=13% Similarity=0.099 Sum_probs=176.2
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCCcceEEecCC-hHHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeee
Q 022463 27 YIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG-SPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 105 (297)
Q Consensus 27 ~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG-~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 105 (297)
...++.++.++++++++|+++++ .+++++| +.++..++.+++++||+|+++..+|++.. +. ..+...|..
T Consensus 41 ~~~~~~~~l~~~la~~~g~~~~~---~~~~~~s~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~--~~----~~~~~~g~~ 111 (416)
T 3isl_A 41 AFTGIMNETMEMLRELFQTKNRW---AYPIDGTSRAGIEAVLASVIEPEDDVLIPIYGRFGYL--LT----EIAERYGAN 111 (416)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSE---EEEEESCHHHHHHHHHHHHCCTTCEEEEEESSHHHHH--HH----HHHHHTTCE
T ss_pred HHHHHHHHHHHHHHHHhCCCCCc---EEEecCcHHHHHHHHHHHhcCCCCEEEEecCCcccHH--HH----HHHHhcCCe
Confidence 34566667779999999998753 2335544 46777788888999999999997776521 11 012223333
Q ss_pred eEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCCCC
Q 022463 106 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 183 (297)
Q Consensus 106 ~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~~~ 183 (297)
+..+ +.+ .++.+|++++++++++.+|++|++ +++| +|.+.|+++|.++|++||+++|+|++|+.|..+.+....
T Consensus 112 ~~~v--~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~- 187 (416)
T 3isl_A 112 VHML--ECE-WGTVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIGGCEVKVDEW- 187 (416)
T ss_dssp EEEE--ECC-TTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCTTTT-
T ss_pred eEEE--ecC-CCCCCCHHHHHHHHhhCCCcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCccccCCCcchhhc-
Confidence 4444 455 456899999999998448999998 6667 899999999999999999999999999998887776655
Q ss_pred CCCccEEEecCCccCCCCCc-eEEEEecCchhhcc------CCccc-------------hhhH--HHHhhhc--ccCCCC
Q 022463 184 FEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK------QGKEV-------------FYDY--EEKINQA--VFPGLQ 239 (297)
Q Consensus 184 ~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~------~g~~~-------------~~~~--~~~~~~~--~~~~~~ 239 (297)
++|++++|+||+++||.| |+++.+++...++. .||.. ...+ ...+... ......
T Consensus 188 --~~d~~~~s~~K~l~g~~g~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~ 265 (416)
T 3isl_A 188 --KIDAAIGGTQKCLSVPSGMAPITYNERVADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNH 265 (416)
T ss_dssp --TCSEEECCSSSTTCCCSSEEEEEECHHHHHHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCS
T ss_pred --CCCEEEecCccccCCCCCeEEEEECHHHHHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCC
Confidence 789999999999999988 99999886532211 12210 0000 0011110 011126
Q ss_pred CCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 240 GGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 240 ~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
++++...++++.++++.+.+. |++++.++.+++++++.+.|++.
T Consensus 266 ~~~~~~~~~a~~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~ 309 (416)
T 3isl_A 266 HTEATTMLYALREGVRLVLEE-GLETRFERHRHHEAALAAGIKAM 309 (416)
T ss_dssp SCCCHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHc
Confidence 688899999999999999888 89999999999999999999875
No 11
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.93 E-value=4.4e-25 Score=201.03 Aligned_cols=241 Identities=14% Similarity=0.129 Sum_probs=176.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcceEEecCC-hHHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeeee
Q 022463 28 IDMAESLCQKRALEAFRLDPEKWGVNVQSLSG-SPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFF 106 (297)
Q Consensus 28 ~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG-~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 106 (297)
..++.++.+++++++++++.++ .+++++| +.++..++.+++++||+|+++..+|++.. ... .+...|..+
T Consensus 44 ~~~~~~~~~~~la~~~~~~~~~---~v~~~~sgt~al~~~~~~~~~~gd~Vl~~~~~~~~~~-~~~-----~~~~~g~~~ 114 (411)
T 3nnk_A 44 MTHYMNEVMALYRGVFRTENRW---TMLVDGTSRAGIEAILVSAIRPGDKVLVPVFGRFGHL-LCE-----IARRCRAEV 114 (411)
T ss_dssp HHHHHHHHHHHHHHHHTCCCSE---EEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHH-HHH-----HHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHhCCCCCc---EEEECCCcHHHHHHHHHHhcCCCCEEEEecCCchHHH-HHH-----HHHHcCCeE
Confidence 3455666779999999998653 3566655 56777788888999999999997776531 011 122233334
Q ss_pred EeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCCCCC
Q 022463 107 ETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF 184 (297)
Q Consensus 107 ~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~~~~ 184 (297)
..+ +.+ .++.+|++++++++++.+|++|++ +++| +|.+.|+++|.++|++||+++|+|++|+.+..+.+....
T Consensus 115 ~~v--~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~-- 189 (411)
T 3nnk_A 115 HTI--EVP-WGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATASLGGNPLETDVW-- 189 (411)
T ss_dssp EEE--ECC-TTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTBTTBCCCTTTT--
T ss_pred EEE--ecC-CCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcccCCcccchhcc--
Confidence 444 444 567889999999998668999999 6666 899999999999999999999999999998887766655
Q ss_pred CCccEEEecCCccCCCCCc-eEEEEecCchhh---cc---CCcc-----------ch---hhHHHHhhh-cccCCCCCCC
Q 022463 185 EYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI---NK---QGKE-----------VF---YDYEEKINQ-AVFPGLQGGP 242 (297)
Q Consensus 185 ~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~---~~---~g~~-----------~~---~~~~~~~~~-~~~~~~~~t~ 242 (297)
++|++++|+||+|++|.| |+++++++...+ .. .++. .. .+....... .......+++
T Consensus 190 -~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (411)
T 3nnk_A 190 -GLDAVSAGMQKCLGGPSGTSPITLSARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTE 268 (411)
T ss_dssp -TCSEEECCSTTTTCCCSSEEEEEECHHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCC
T ss_pred -CCcEEEecCccccCCCCceEEEEECHHHHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCC
Confidence 789999999999989888 999998865321 11 0000 00 000000000 0011125788
Q ss_pred chHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 243 HNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 243 ~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
+...++++.++++.+.+. |++++.++.+++.+++.+.|++.
T Consensus 269 ~~~~~~a~~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~ 309 (411)
T 3nnk_A 269 ATTALFGARECARLILQE-GLDYGIARHKLHGDALVKGIQAM 309 (411)
T ss_dssp CHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHc
Confidence 899999999999999888 99999999999999999999876
No 12
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.93 E-value=1.6e-26 Score=208.23 Aligned_cols=259 Identities=10% Similarity=0.000 Sum_probs=178.9
Q ss_pred ccccccccccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEe-cCCh-HHHHHHHHHhcCC--CCeE
Q 022463 2 QAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGS-PSNFQVYTALLKP--HDRI 77 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~-~sG~-~~~~~~~~~~~~~--gd~V 77 (297)
|+|...|.+-++.+.+......-.+...++-+++|+.+++++|+++++ .|+| ++|+ .++..++.+++++ ||+|
T Consensus 30 ~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~---evif~t~~~T~a~n~a~~~l~~~~~Gd~v 106 (377)
T 3e77_A 30 LEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNY---KVIFLQGGGCGQFSAVPLNLIGLKAGRCA 106 (377)
T ss_dssp HHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTE---EEEEESSHHHHHHHHHHHHHGGGSTTCEE
T ss_pred HHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCC---eEEEEcCchHHHHHHHHHhccCCCCCCeE
Confidence 566667776554322211111123445566668899999999997532 3777 4444 4665688888765 9999
Q ss_pred EEecCCCCCccccccc-ccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-c-CCCCCCcccHHHHH
Q 022463 78 MALDLPHGGHLSHGYQ-TDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-G-ASAYARLYDYERIR 154 (297)
Q Consensus 78 l~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~-~~~~G~~~~~~~i~ 154 (297)
++...+|.+. ++.. .++.+ ..+..+ +.+ .++..+++.++..+++ +|++|.+ + .+.+|.+.|+
T Consensus 107 ~~~~~g~~~~--~~~~~a~~~G-----~~~~~~--~~~-~~~~~~~~~~~~~i~~-~t~lV~~~h~et~tG~~~pi---- 171 (377)
T 3e77_A 107 DYVVTGAWSA--KAAEEAKKFG-----TINIVH--PKL-GSYTKIPDPSTWNLNP-DASYVYYCANETVHGVEFDF---- 171 (377)
T ss_dssp EECCCSHHHH--HHHHHHTTTS-----EEEECS--CCC-SSSCSCCCGGGCCCCT-TCSCEEEESEETTTTEECSS----
T ss_pred EEEECCHHHH--HHHHHHHHhC-----CceEEe--ccC-CCcCCCCChHHhccCC-CccEEEEeCccCchheEchh----
Confidence 8877666554 2322 22223 223233 343 3445667777767776 8999888 4 4447999998
Q ss_pred HHHHhcCCEEEEehhhhcccccccCCCCCCCCccEEEecCCccCCCCCc-eEEEEecCchhhccCCccchhhHHHHhhhc
Q 022463 155 KVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQA 233 (297)
Q Consensus 155 ~la~~~g~~livD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~~g~~~~~~~~~~~~~~ 233 (297)
+|+++|+++++|++|++|..++++..+ |++++|+|||+ ||.| |++++++++..+.....+...++.....
T Consensus 172 -i~~~~~~~~~vD~~q~~g~~~id~~~~-----~~~~~s~~K~~-gp~G~g~l~~~~~~l~~~~~~~p~~~~~~~~~~-- 242 (377)
T 3e77_A 172 -IPDVKGAVLVCDMSSNFLSKPVDVSKF-----GVIFAGAQKNV-GSAGVTVVIVRDDLLGFALRECPSVLEYKVQAG-- 242 (377)
T ss_dssp -CCCCTTCCEEEECTTTTTSSCCCGGGC-----SEEEEEGGGTT-SCTTCEEEEEETTSCSCCCTTSCGGGCHHHHHT--
T ss_pred -hhccCCCEEEEEcccccCCCCCchhhc-----CEEEEeccccc-CCCccEEEEEcHHHHhhccCCCCchhhHHHHhh--
Confidence 588999999999999999999998876 57899999999 8999 9999999864321110111112221111
Q ss_pred ccCCCCCCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 234 VFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 234 ~~~~~~~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
.....+||++..++++.+||+++.+..|++.++++.+++++++++.|++++.+.
T Consensus 243 -~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~ 296 (377)
T 3e77_A 243 -NSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFY 296 (377)
T ss_dssp -TTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSE
T ss_pred -cCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCce
Confidence 123368999999999999999998875799999999999999999999998665
No 13
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.93 E-value=4.4e-26 Score=205.08 Aligned_cols=232 Identities=15% Similarity=0.109 Sum_probs=176.2
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhc----CCCCeEEEecCCCCCcccccccccccccc
Q 022463 26 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALL----KPHDRIMALDLPHGGHLSHGYQTDTKKIS 100 (297)
Q Consensus 26 ~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~----~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~ 100 (297)
....++.++.++++++++|+++++ +++++|+ .++..++.++. ++||+|+++..+|+++...+..+...+
T Consensus 39 ~~~~~~~~~~~~~la~~~~~~~~~----i~~~~g~~~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g-- 112 (382)
T 4hvk_A 39 FKAREAVQEAREKVAKLVNGGGGT----VVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQG-- 112 (382)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTEE----EEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTT--
T ss_pred HHHHHHHHHHHHHHHHHcCCCcCe----EEEECCchHHHHHHHHHhhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcC--
Confidence 445566667779999999998754 8888887 47766788776 999999999999988866544332222
Q ss_pred eeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhccccccc
Q 022463 101 AVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG 178 (297)
Q Consensus 101 ~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~ 178 (297)
..+ +.++.+ +++.+|++++++.+++ +|++|++ +++| +|.+.|+++|.++|++||+ +|+|++|+.+..+.+
T Consensus 113 ---~~~--~~v~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~~ 184 (382)
T 4hvk_A 113 ---FEV--EYIPVG-KYGEVDVSFIDQKLRD-DTILVSVQHANNEIGTIQPVEEISEVLAGKAA-LHIDATASVGQIEVD 184 (382)
T ss_dssp ---CEE--EEECBC-TTSCBCHHHHHHHCCT-TEEEEECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEECTTTBTTBCCC
T ss_pred ---CEE--EEeccC-CCCCcCHHHHHHHhcc-CceEEEEECCCCCceeeCCHHHHHHHHHHcCE-EEEEhHHhcCCCCCC
Confidence 223 334555 5678999999999987 8888888 6667 8999999999999999999 999999998877655
Q ss_pred CCCCCCCCccEEEecCCccCCCCCc-eEEEEecCchhh-ccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHHHHHHH
Q 022463 179 VIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI-NKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 256 (297)
Q Consensus 179 ~~~~~~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~ 256 (297)
.... ++|++++|+||+ .||.| |+++++++...+ ...++.. . .....++++...++++.++++.
T Consensus 185 ~~~~---~~d~~~~s~~K~-~g~~g~g~~~~~~~~~~~~~~~~~~~---------~--~~~~~~~~~~~~~~~~~~al~~ 249 (382)
T 4hvk_A 185 VEKI---GADMLTISSNDI-YGPKGVGALWIRKEAKLQPVILGGGQ---------E--NGLRSGSENVPSIVGFGKAAEI 249 (382)
T ss_dssp HHHH---TCSEEEEESGGG-TSCTTCEEEEEETTCCCCCSSCSSCT---------G--GGTSCSCCCHHHHHHHHHHHHH
T ss_pred chhc---CCCEEEEeHHHh-cCCCceEEEEEcCccCcCcccccCCC---------c--CccccCCcCHHHHHHHHHHHHH
Confidence 4433 689999999996 57777 999998864322 1111110 0 0112567788889999899886
Q ss_pred HhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 257 VCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 257 ~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
+. . +++++.++.+++++++.+.|++++.++
T Consensus 250 ~~-~-~~~~~~~~~~~~~~~l~~~L~~~~~~~ 279 (382)
T 4hvk_A 250 TA-M-EWREEAERLRRLRDRIIDNVLKIEESY 279 (382)
T ss_dssp HH-H-HHHHHHHHHHHHHHHHHHHHTTSTTEE
T ss_pred HH-h-hHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 54 4 789999999999999999999887654
No 14
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.93 E-value=2e-25 Score=204.31 Aligned_cols=232 Identities=16% Similarity=0.176 Sum_probs=173.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhc----CCCCeEEEecCCCCCcccccccccccccce
Q 022463 27 YIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALL----KPHDRIMALDLPHGGHLSHGYQTDTKKISA 101 (297)
Q Consensus 27 ~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~----~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~ 101 (297)
...+..++.++++++++++++++ +++++|+ +++..++.++. ++||+|+++..+|++....+..+...
T Consensus 65 ~~~~~~~~l~~~la~~~~~~~~~----v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~---- 136 (423)
T 3lvm_A 65 QAEEAVDIARNQIADLVGADPRE----IVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLERE---- 136 (423)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGG----EEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHT----
T ss_pred HHHHHHHHHHHHHHHHcCCCCCe----EEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHc----
Confidence 34555666779999999998754 7777776 57776777776 38999999998888876544322222
Q ss_pred eeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccC
Q 022463 102 VSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV 179 (297)
Q Consensus 102 ~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~ 179 (297)
|..+ +.++.+ .++.+|++++++++++ ++++|++ +++| +|.+.|+++|.++|++||+++|+|++|+.+..+.+.
T Consensus 137 -g~~~--~~v~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~ 211 (423)
T 3lvm_A 137 -GFEV--TYLAPQ-RNGIIDLKELEAAMRD-DTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDL 211 (423)
T ss_dssp -TCEE--EEECCC-TTSCCCHHHHHHHCCT-TEEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCT
T ss_pred -CCEE--EEeccC-CCCccCHHHHHHhcCC-CcEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcCh
Confidence 3223 344555 4688999999999987 8888888 5666 799999999999999999999999999988876665
Q ss_pred CCCCCCCccEEEecCCccCCCCCc-eEEEEecCchhh---ccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHHHHHH
Q 022463 180 IPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI---NKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALK 255 (297)
Q Consensus 180 ~~~~~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~ 255 (297)
... ++|++++|+||+ .||.| |+++++++...+ ...++.. ......++++...++++.++++
T Consensus 212 ~~~---~~di~~~s~sK~-~g~~g~G~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~a~~~al~ 276 (423)
T 3lvm_A 212 SQL---KVDLMSFSGHKI-YGPKGIGALYVRRKPRVRIEAQMHGGGH-----------ERGMRSGTLPVHQIVGMGEAYR 276 (423)
T ss_dssp TTS---CCSEEEEESTTT-TSCSSCEEEEECBTTBCCCCCSSCSSCT-----------TTTTCCSCCCHHHHHHHHHHHH
T ss_pred hhc---CCCEEEechHHh-cCCCCeEEEEEeccccCCCCccccCCcc-----------cccccCCCCCHHHHHHHHHHHH
Confidence 554 789999999995 56777 999998754211 1111110 0011256778888889889998
Q ss_pred HHhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 256 QVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 256 ~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
.+.+. ++++.++.+++.+++.+.|++++.++
T Consensus 277 ~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~ 307 (423)
T 3lvm_A 277 IAKEE--MATEMERLRGLRNRLWNGIKDIEEVY 307 (423)
T ss_dssp HHHHH--HHHHHHHHHHHHHHHHHHHTTSTTEE
T ss_pred HHHHH--HHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 77643 78899999999999999999887654
No 15
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.93 E-value=4.3e-25 Score=199.06 Aligned_cols=240 Identities=15% Similarity=0.097 Sum_probs=175.2
Q ss_pred hHHHHHHHHHHHHHHHcCCCC--CCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceee
Q 022463 27 YIDMAESLCQKRALEAFRLDP--EKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS 103 (297)
Q Consensus 27 ~~~~~e~~~~~~la~~~g~~~--~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 103 (297)
...++.++.++++++++|+++ + .+++++|+ .++. ++.+++++||+|+++..+|++. ++... +...|
T Consensus 32 ~~~~~~~~~~~~la~~~~~~~~~~----~v~~~~g~t~al~-~~~~~~~~gd~vi~~~~~~~~~--~~~~~----~~~~g 100 (384)
T 3zrp_A 32 EFVEALAYSLKGLRYVMGASKNYQ----PLIIPGGGTSAME-SVTSLLKPNDKILVVSNGVFGD--RWEQI----FKRYP 100 (384)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTSE----EEEEESCHHHHHH-HGGGGCCTTCEEEEECSSHHHH--HHHHH----HTTSS
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCc----EEEEcCCcHHHHH-HHHhhcCCCCEEEEecCCcchH--HHHHH----HHHcC
Confidence 335566667799999999986 4 37777776 5777 8888899999999998766542 11111 12223
Q ss_pred eeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCC
Q 022463 104 IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP 181 (297)
Q Consensus 104 ~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~ 181 (297)
..+ ++++.+ .++.+|++++++.++++++++|++ +++| +|.+.|+++|.++|++||+++|+|++|+.+..+.+...
T Consensus 101 ~~~--~~v~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~ 177 (384)
T 3zrp_A 101 VNV--KVLRPS-PGDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREPVKDVINKIRKYVELIVVDGVSSVGAEEVKAEE 177 (384)
T ss_dssp CEE--EEECCS-TTCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEEECTTTTTTSCCCTTT
T ss_pred CcE--EEecCC-CCCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEEECcccccCccccccc
Confidence 334 344555 467899999999998767898888 6666 89999999999999999999999999998887776655
Q ss_pred CCCCCccEEEecCCccCCCCCc-eEEEEecCchhhc-cCCc-cch----hhHHHHhhhcc--cCCCCCCCchHHHHHHHH
Q 022463 182 SPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN-KQGK-EVF----YDYEEKINQAV--FPGLQGGPHNHTITGLAV 252 (297)
Q Consensus 182 ~~~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~-~~g~-~~~----~~~~~~~~~~~--~~~~~~t~~~~~~~al~~ 252 (297)
. ++|++++|+||+++||.| |+++++++...++ ..+. ..+ ..+........ .....++++...++++.+
T Consensus 178 ~---~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~ 254 (384)
T 3zrp_A 178 W---NVDVYLTASQKALGSAAGLGLLLLSPKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAE 254 (384)
T ss_dssp T---TCSEEEEETTSTTCCCSSEEEEEECHHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHH
T ss_pred c---CCCEEEecCcccccCCCceEEEEECHHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHH
Confidence 4 789999999999988888 9999988642111 0000 000 01111111100 111135888899999999
Q ss_pred HHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 253 ALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 253 al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
+++.+.+. +++++.++.+++.+++.+.|+++
T Consensus 255 al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 285 (384)
T 3zrp_A 255 AFRLIEKE-GIENRIKRHTMVASAIRAGLEAL 285 (384)
T ss_dssp HHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHC
Confidence 99998887 89999999999999999999876
No 16
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.93 E-value=6.9e-25 Score=198.65 Aligned_cols=239 Identities=14% Similarity=0.057 Sum_probs=170.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeeeeE
Q 022463 29 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFE 107 (297)
Q Consensus 29 ~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 107 (297)
....+..++++++++|+++++ +++++|+ .++..++.+++++||+|+++..+|++.. +... +...|..+.
T Consensus 41 ~~~~~~l~~~la~~~g~~~~~----v~~t~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~--~~~~----~~~~g~~~~ 110 (392)
T 2z9v_A 41 QLLYEKVVDKAQKAMRLSNKP----VILHGEPVLGLEAAAASLISPDDVVLNLASGVYGKG--FGYW----AKRYSPHLL 110 (392)
T ss_dssp HHHHHHHHHHHHHHTTCSSCC----EEESSCTHHHHHHHHHHHCCTTCCEEEEESSHHHHH--HHHH----HHHHCSCEE
T ss_pred HHHHHHHHHHHHHHhCCCCCE----EEEeCCchHHHHHHHHHhcCCCCEEEEecCCcccHH--HHHH----HHHcCCceE
Confidence 344455669999999997654 7887766 5777788888999999999998877652 1111 111233343
Q ss_pred eeecccCCCCCcCCHHHHHHHhhh-cCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCCCCC
Q 022463 108 TMPYRLNESTGYIDYDQLEKSATL-FRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF 184 (297)
Q Consensus 108 ~v~~~~~~~~~~~d~~~l~~~l~~-~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~~~~ 184 (297)
.+ +.+ .++.+|++++++.+++ .++++|++ +++| +|.+.|+++|.++|+++|+++|+|++|+.|..+.++...
T Consensus 111 ~v--~~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~-- 185 (392)
T 2z9v_A 111 EI--EVP-YNEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTHPEDC-- 185 (392)
T ss_dssp EE--ECC-TTSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBSCCGGGG--
T ss_pred Ee--eCC-CCCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceeccHHHHHHHHHHcCCeEEEEcccccCCcccccccc--
Confidence 44 455 3467999999999963 37899888 6666 799999999999999999999999999988766554333
Q ss_pred CCccEEEecCCccCCCCCc-eEEEEecCchhhc---cCC-ccchhhHHHHhhh-cccCCCCCCCchHHHHHHHHHHHHHh
Q 022463 185 EYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN---KQG-KEVFYDYEEKINQ-AVFPGLQGGPHNHTITGLAVALKQVC 258 (297)
Q Consensus 185 ~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~---~~g-~~~~~~~~~~~~~-~~~~~~~~t~~~~~~~al~~al~~~~ 258 (297)
++|++++|+||+++||.| |+++++++...++ ..| +....++...... .......++++...++++.++++.+.
T Consensus 186 -~~d~~~~s~sK~~~~~~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~ 264 (392)
T 2z9v_A 186 -KADIYVTGPNKCLGAPPGLTMMGVSERAWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYL 264 (392)
T ss_dssp -TCSEEEECSSSTTCCCSCCEEEEECHHHHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHH
T ss_pred -cceEEEecCcccccCCCceeEEEECHHHHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHH
Confidence 689999999999999888 9999988542111 100 0000000000000 00111256788888889999999888
Q ss_pred hhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 259 TLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 259 ~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
+. |++++.++.+++.+++.+.|+++
T Consensus 265 ~~-g~~~~~~~~~~~~~~l~~~L~~~ 289 (392)
T 2z9v_A 265 NE-GPEAVWARHALTAKAMRAGVTAM 289 (392)
T ss_dssp HH-CHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hc-cHHHHHHHHHHHHHHHHHHHHHc
Confidence 77 89999999999999999998875
No 17
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.93 E-value=8.9e-26 Score=209.68 Aligned_cols=240 Identities=11% Similarity=0.037 Sum_probs=177.3
Q ss_pred HHHHHHHHHHcCCCCCCCcceEEecCChH-HHHHHHHHhcCCCCe---EEEecCCCCCccccccc-ccccccceeeeeeE
Q 022463 33 SLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDR---IMALDLPHGGHLSHGYQ-TDTKKISAVSIFFE 107 (297)
Q Consensus 33 ~~~~~~la~~~g~~~~~~~~~v~~~sG~~-~~~~~~~~~~~~gd~---Vl~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~ 107 (297)
+.+++++++++|+++++ |++++|++ ++..++.+++++||. |+++..+|++...++.. ....++......+.
T Consensus 114 ~~l~~~la~~~g~~~~~----v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~ 189 (465)
T 3e9k_A 114 ESIVGLMKDIVGANEKE----IALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRM 189 (465)
T ss_dssp HHHHGGGHHHHTCCGGG----EEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEE
T ss_pred HHHHHHHHHHcCCCcCC----EEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEE
Confidence 34569999999998764 99999985 444577888777665 99999999886554432 12223332211111
Q ss_pred eeecccCCCCCcCCHHHHHHHhhh--cCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCCCC
Q 022463 108 TMPYRLNESTGYIDYDQLEKSATL--FRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 183 (297)
Q Consensus 108 ~v~~~~~~~~~~~d~~~l~~~l~~--~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~~~ 183 (297)
.+ +.+ +++.+|+++++++|++ .++++|++ +++| +|.+.|+++|.++|++||+++|+|++|+.|..+.++..+
T Consensus 190 ~~--~~~-~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~~- 265 (465)
T 3e9k_A 190 IK--PRE-GEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHDW- 265 (465)
T ss_dssp EC--CCT-TCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH-
T ss_pred Ee--cCC-CCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhhc-
Confidence 22 233 5678999999999973 26888888 6777 799999999999999999999999999999988776655
Q ss_pred CCCccEEEecCCccCC-CCCc-eEEEEecCchhh---ccCCccchhhHHHHhh--hccc--C----CCCCCCchHHHHHH
Q 022463 184 FEYADVVTTTTHKSLR-GPRG-AMIFFRKGVKEI---NKQGKEVFYDYEEKIN--QAVF--P----GLQGGPHNHTITGL 250 (297)
Q Consensus 184 ~~~~D~~~~s~~K~l~-gp~g-G~i~~~~~~~~~---~~~g~~~~~~~~~~~~--~~~~--~----~~~~t~~~~~~~al 250 (297)
++|++++|+||+++ ||.| |+++++++...+ ...||.+. .....+. .... + ...|+++...++++
T Consensus 266 --~~D~~~~s~~K~l~~gp~~~g~l~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~ 342 (465)
T 3e9k_A 266 --GVDFACWCSYKYLNAGAGGIAGAFIHEKHAHTIKPALVGWFGH-ELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSL 342 (465)
T ss_dssp --TCCEEEECSSSTTCCCTTCCCEEEECGGGTTTSCCSSCCGGGB-CHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHH
T ss_pred --CCCEEEECcccccccCCCceEEEEEcHHHHhhcCCcccCccCC-CCCcccccCCCcCcCCChHHhccCCccHHHHHHH
Confidence 79999999999995 7888 999998876322 33344322 1111111 0000 1 11679999999999
Q ss_pred HHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 251 AVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 251 ~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
.++++.+.+. |+++++++..++.+++.+.|++.
T Consensus 343 ~aal~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 375 (465)
T 3e9k_A 343 HASLEIFKQA-TMKALRKKSVLLTGYLEYLIKHN 375 (465)
T ss_dssp HHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999988 99999999999999999999874
No 18
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.93 E-value=2.7e-24 Score=194.79 Aligned_cols=242 Identities=12% Similarity=0.106 Sum_probs=173.4
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeee
Q 022463 27 YIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 105 (297)
Q Consensus 27 ~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 105 (297)
......++.++++++++|+++++ .+++++|+ .++..++.+++++||+|+++..+|++.. +... +...|..
T Consensus 49 ~~~~~~~~l~~~la~~~g~~~~~---~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~----~~~~g~~ 119 (393)
T 2huf_A 49 ETLKIMDDIKEGVRYLFQTNNIA---TFCLSASGHGGMEATLCNLLEDGDVILIGHTGHWGDR--SADM----ATRYGAD 119 (393)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCSE---EEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHH----HHHTTCE
T ss_pred HHHHHHHHHHHHHHHHhCCCCCc---EEEEcCcHHHHHHHHHHHHhCCCCEEEEECCCcchHH--HHHH----HHHcCCe
Confidence 34455666779999999998642 38787776 5777788888999999999998776631 1100 1112333
Q ss_pred eEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCCCC
Q 022463 106 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 183 (297)
Q Consensus 106 ~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~~~ 183 (297)
+..+ +.+ .++.+|++++++.+++.++++|++ +++| +|.+.|+++|.++|+++|+++|+|++|+.|..+.++...
T Consensus 120 ~~~v--~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~- 195 (393)
T 2huf_A 120 VRVV--KSK-VGQSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMFMDRW- 195 (393)
T ss_dssp EEEE--ECC-TTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTT-
T ss_pred eEEE--eCC-CCCCCCHHHHHHHHhccCCcEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCcchhhc-
Confidence 4344 455 456899999999998657999988 6666 799999999999999999999999999988776654443
Q ss_pred CCCccEEEecCCccCCCCCc-eEEEEecCchhhccCC---ccchh-hH---HHHhhhc-ccCCCCCCCchHHHHHHHHHH
Q 022463 184 FEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQG---KEVFY-DY---EEKINQA-VFPGLQGGPHNHTITGLAVAL 254 (297)
Q Consensus 184 ~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~~g---~~~~~-~~---~~~~~~~-~~~~~~~t~~~~~~~al~~al 254 (297)
++|++++|+||+|+||.| |+++++++...++... ...+. +. .+.+... ......++++...++++.+++
T Consensus 196 --~~d~~~~s~sK~l~g~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al 273 (393)
T 2huf_A 196 --EIDAMYTGSQKVLGAPPGITPVSFSHRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAI 273 (393)
T ss_dssp --TCSEEECCSSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHH
T ss_pred --CccEEEECCCcccccCCCeEEEEECHHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHH
Confidence 689999999999999888 9999987542221100 00000 00 0000000 001125678889999999999
Q ss_pred HHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 255 KQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 255 ~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
+.+.+. +++++.++.+++.+++.+.|+++
T Consensus 274 ~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 302 (393)
T 2huf_A 274 AMACEE-GLPALIARHEDCAKRLYRGLQDA 302 (393)
T ss_dssp HHHHHH-CHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHh-CHHHHHHHHHHHHHHHHHHHHHc
Confidence 988777 88999999999999999999876
No 19
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.93 E-value=1.1e-24 Score=197.72 Aligned_cols=242 Identities=17% Similarity=0.194 Sum_probs=173.1
Q ss_pred HHHHHHHHHHHHHcCC-CCCCCcceEEecCCh-HHHHHHHHHh----cCCCCeEEEecCCCCCcccccccccccccceee
Q 022463 30 MAESLCQKRALEAFRL-DPEKWGVNVQSLSGS-PSNFQVYTAL----LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS 103 (297)
Q Consensus 30 ~~e~~~~~~la~~~g~-~~~~~~~~v~~~sG~-~~~~~~~~~~----~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 103 (297)
...++.++.++++++. ++++ +++++|+ .++..++.++ +++||+|+++..+|++.+.++... +...|
T Consensus 67 ~~~~~l~~~la~~~~~~~~~~----v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~----~~~~g 138 (406)
T 1kmj_A 67 EKMENVRKRASLFINARSAEE----LVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQML----CARVG 138 (406)
T ss_dssp HHHHHHHHHHHHHTTCSCGGG----EEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHH----HHHHT
T ss_pred HHHHHHHHHHHHHcCCCCCCe----EEEeCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHH----HHhCC
Confidence 3444566999999998 5543 8887777 5777788888 899999999999988876543221 11223
Q ss_pred eeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCC
Q 022463 104 IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP 181 (297)
Q Consensus 104 ~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~ 181 (297)
..+..+ +.+ .++.+|++++++.+++ ++++|++ +++| +|.+.|+++|.++|++||+++|+|++|+.|..+.++..
T Consensus 139 ~~~~~~--~~~-~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~~~~ 214 (406)
T 1kmj_A 139 AELRVI--PLN-PDGTLQLETLPTLFDE-KTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQA 214 (406)
T ss_dssp CEEEEE--CBC-TTSCBCGGGHHHHCCT-TEEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHH
T ss_pred CEEEEE--ecC-CCCCcCHHHHHHHhcc-CCeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCCcccc
Confidence 223333 455 4578999999999987 8999888 6666 79999999999999999999999999998766543322
Q ss_pred CCCCCccEEEecCCccCCCCCc-eEEEEecCchhh---ccCCccchhhH-HH-HhhhcccC--CCCCCCchHHHHHHHHH
Q 022463 182 SPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI---NKQGKEVFYDY-EE-KINQAVFP--GLQGGPHNHTITGLAVA 253 (297)
Q Consensus 182 ~~~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~---~~~g~~~~~~~-~~-~~~~~~~~--~~~~t~~~~~~~al~~a 253 (297)
. +.|++++|+||++ ||.| |+++++++...+ ...|+...... .. .......+ ...++++...++++.++
T Consensus 215 ~---~~d~~~~s~~K~~-g~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a 290 (406)
T 1kmj_A 215 L---DCDFYVFSGHKLY-GPTGIGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAA 290 (406)
T ss_dssp H---TCSEEEEEGGGTT-SCTTCEEEEECHHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHH
T ss_pred c---CCCEEEEEchhcc-CCCCcEEEEEeHHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHH
Confidence 2 6899999999977 7888 999998754222 11122100000 00 00000000 11457788888888889
Q ss_pred HHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 254 LKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 254 l~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
++.+.+. +++++.++.+++.+++.+.|++++.++
T Consensus 291 l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~ 324 (406)
T 1kmj_A 291 LEYVSAL-GLNNIAEYEQNLMHYALSQLESVPDLT 324 (406)
T ss_dssp HHHHHHH-CHHHHHHHHHHHHHHHHHHHTTSTTEE
T ss_pred HHHHHHc-CHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 9988877 899999999999999999999987654
No 20
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.92 E-value=6e-25 Score=200.06 Aligned_cols=230 Identities=13% Similarity=0.104 Sum_probs=171.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcceEEecCChH-HHHHHHHHh---cCCCCeEEEecCCCCCcccccccccccccceeee
Q 022463 29 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL---LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 104 (297)
Q Consensus 29 ~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~-~~~~~~~~~---~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 104 (297)
....++.++++++++|+++++ +++++|++ ++..++.++ +++||+|+++..+|++...++..+.. ..|.
T Consensus 68 ~~~~~~l~~~la~~~g~~~~~----v~~~~g~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~----~~g~ 139 (406)
T 3cai_A 68 AAVLDAAREAVADLVNADPGG----VVLGADRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAH----RYGA 139 (406)
T ss_dssp HHHHHHHHHHHHHHHTCCGGG----EEEESCHHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHH----HHBC
T ss_pred HHHHHHHHHHHHHHhCCCCCe----EEEeCChHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHH----hcCC
Confidence 445556669999999997654 88888875 555566666 78999999999999887655542211 1232
Q ss_pred eeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCCC
Q 022463 105 FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 182 (297)
Q Consensus 105 ~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~~ 182 (297)
.+ +.++.+++++.+|+++|++.+++ +|++|++ +++| +|.+.|+++|.++|+++|+++|+|++|+.|..+.++...
T Consensus 140 ~v--~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~ 216 (406)
T 3cai_A 140 KV--KWAEVDIETGELPTWQWESLISK-STRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIRET 216 (406)
T ss_dssp EE--EEECCCTTTCCCCGGGHHHHCCT-TEEEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCCHHHH
T ss_pred eE--EEEecCcccCCcCHHHHHHHhCC-CceEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCCchhc
Confidence 23 33455545678999999999987 8898888 6766 799999999999999999999999999987765543322
Q ss_pred CCCCccEEEecCCccCCCCCce-EEEEecCchhhccCCccchhhHHHHhhhcc--------cCCCCCCCchHHHHHHHHH
Q 022463 183 PFEYADVVTTTTHKSLRGPRGA-MIFFRKGVKEINKQGKEVFYDYEEKINQAV--------FPGLQGGPHNHTITGLAVA 253 (297)
Q Consensus 183 ~~~~~D~~~~s~~K~l~gp~gG-~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~--------~~~~~~t~~~~~~~al~~a 253 (297)
++|++++|+||++ ||.+| +++++++. .+.+.... .....++++...++++.++
T Consensus 217 ---~~d~~~~s~~K~~-g~~~G~~~~~~~~~--------------~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~a 278 (406)
T 3cai_A 217 ---DADVVTVNAHAWG-GPPIGAMVFRDPSV--------------MNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVAS 278 (406)
T ss_dssp ---CCSEEEEEGGGGT-SCSCEEEEESCHHH--------------HHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHH
T ss_pred ---CCCEEEeehhhhc-CCCcCeEEEEehHH--------------HhhcCCcccCCCCCccccccCCCccHHHHHHHHHH
Confidence 6899999999976 56677 99888743 22221110 0011567888888898999
Q ss_pred HHHHhhhcC--------------hhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 254 LKQVCTLIT--------------FSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 254 l~~~~~~~g--------------~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
++.+.+. | ++++.++.+++.+++.+.|++++.++
T Consensus 279 l~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 326 (406)
T 3cai_A 279 IEYLAAL-DESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVM 326 (406)
T ss_dssp HHHHHTS-STTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred HHHHHHh-ccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 9988765 5 68899999999999999999887653
No 21
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.92 E-value=4.8e-24 Score=192.44 Aligned_cols=239 Identities=12% Similarity=0.029 Sum_probs=172.1
Q ss_pred HHHHHHHHHHHHHHHcCCC-CCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeee
Q 022463 28 IDMAESLCQKRALEAFRLD-PEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 105 (297)
Q Consensus 28 ~~~~e~~~~~~la~~~g~~-~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 105 (297)
..++++.+++++++++|++ ++ .+++++|+ .++..++.+++++||+|+++..+|++.. ... .+...|..
T Consensus 51 ~~~~~~~~~~~la~~~g~~~~~----~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~-~~~-----~~~~~g~~ 120 (386)
T 2dr1_A 51 YRKVHMDTVERLREFLEVEKGE----VLLVPSSGTGIMEASIRNGVSKGGKVLVTIIGAFGKR-YKE-----VVESNGRK 120 (386)
T ss_dssp HHHHHHHHHHHHHHHHTCSSSE----EEEESSCHHHHHHHHHHHHSCTTCEEEEEESSHHHHH-HHH-----HHHHTTCE
T ss_pred HHHHHHHHHHHHHHHhCCCCCc----EEEEeCChHHHHHHHHHHhhcCCCeEEEEcCCchhHH-HHH-----HHHHhCCc
Confidence 4677778889999999997 43 37777776 5777788888999999999998776631 001 12223333
Q ss_pred eEeeecccCCCCCcCCHHHHHHHhhh-cCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCCC
Q 022463 106 FETMPYRLNESTGYIDYDQLEKSATL-FRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 182 (297)
Q Consensus 106 ~~~v~~~~~~~~~~~d~~~l~~~l~~-~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~~ 182 (297)
+ +.++.+ .++.+|+++|++.+++ .++++|++ +++| +|.+.|+++|.++|++||+++|+|++|+.+..+.++...
T Consensus 121 ~--~~v~~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~ 197 (386)
T 2dr1_A 121 A--VVLEYE-PGKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGADIKFDKW 197 (386)
T ss_dssp E--EEEECC-TTCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTTBCCCTTTT
T ss_pred e--EEEecC-CCCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccCcccccccc
Confidence 4 334455 4577999999999953 37899988 6666 799999999999999999999999999988776554433
Q ss_pred CCCCccEEEecCCccCCCCCc-eEEEEecCchhhcc----CCccchhhHHHHhhhcc-cCCCCCCCchHHHHHHHHHHHH
Q 022463 183 PFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK----QGKEVFYDYEEKINQAV-FPGLQGGPHNHTITGLAVALKQ 256 (297)
Q Consensus 183 ~~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~----~g~~~~~~~~~~~~~~~-~~~~~~t~~~~~~~al~~al~~ 256 (297)
++|++++|+||++++|.| |+++++++...++. .++.. ++...+.... .....++++....+++.++++.
T Consensus 198 ---~~di~~~s~sK~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 272 (386)
T 2dr1_A 198 ---GLDVVFSSSQKAFGVPPGLAIGAFSERFLEIAEKMPERGWYF--DIPLYVKYLKEKESTPSTPPMPQVFGINVALRI 272 (386)
T ss_dssp ---TCSEEEEETTSTTCCCSSCEEEEECHHHHHHHTTCTTCCSTT--CHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHH
T ss_pred ---CCcEEEEeccccccCCCceEEEEECHHHHHHHhcCCCCceEE--eHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Confidence 689999999999998877 99999886422211 11110 1111111110 0122457788888899999988
Q ss_pred HhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 257 VCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 257 ~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
+.+..+++++.++.+++.+++.+.|+++
T Consensus 273 ~~~~g~~~~~~~~~~~~~~~l~~~L~~~ 300 (386)
T 2dr1_A 273 IEKMGGKEKWLEMYEKRAKMVREGVREI 300 (386)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHHc
Confidence 7644257889999999999999999876
No 22
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.92 E-value=3.8e-24 Score=193.46 Aligned_cols=241 Identities=12% Similarity=0.078 Sum_probs=173.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeeee
Q 022463 28 IDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFF 106 (297)
Q Consensus 28 ~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 106 (297)
..+..++.+++++++++.+.++ .+++++|+ .++..++++++++||+|+++...|.+... .. .+...|..+
T Consensus 54 ~~~~~~~l~~~la~~~~~~~~~---~v~~~~gg~~al~~~~~~~~~~gd~vl~~~~~~~~~~~-~~-----~~~~~g~~~ 124 (393)
T 3kgw_A 54 MLQIMEEIKQGIQYVFQTRNPL---TLVVSGSGHCAMETALFNLLEPGDSFLTGTNGIWGMRA-AE-----IADRIGARV 124 (393)
T ss_dssp HHHHHHHHHHHHHHHHTCCCSE---EEEESCCTTTHHHHHHHHHCCTTCEEEEEESSHHHHHH-HH-----HHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHhCCCCCc---EEEEeCCcHHHHHHHHHhcCCCCCEEEEEeCCchhHHH-HH-----HHHHcCCce
Confidence 3455566779999999997543 36665555 68777888899999999998755432110 01 122233334
Q ss_pred EeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCCCCC
Q 022463 107 ETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF 184 (297)
Q Consensus 107 ~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~~~~ 184 (297)
..+ +.+ .++.+|++++++.+++.++++|++ +++| +|.+.|+++|.++|++||+++|+|++|+.|..+.+....
T Consensus 125 ~~~--~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~-- 199 (393)
T 3kgw_A 125 HQM--IKK-PGEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVASLGGVPIYMDQQ-- 199 (393)
T ss_dssp EEE--ECC-TTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTTTTSCCCTTTT--
T ss_pred EEE--eCC-CCCCCCHHHHHHHHhhCCCcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECCccccCcccchhhc--
Confidence 444 444 456799999999998768999988 6666 899999999999999999999999999988777665554
Q ss_pred CCccEEEecCCccCCCCCc-eEEEEecCchhhc---cCCccch-hhHH---HHhhhcccC-CCCCCCchHHHHHHHHHHH
Q 022463 185 EYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN---KQGKEVF-YDYE---EKINQAVFP-GLQGGPHNHTITGLAVALK 255 (297)
Q Consensus 185 ~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~---~~g~~~~-~~~~---~~~~~~~~~-~~~~t~~~~~~~al~~al~ 255 (297)
++|++++|+||+++||.| |+++++++...++ ..++... .+.. ..+...... ...++++...++++.++++
T Consensus 200 -~~d~~~~s~sK~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~ 278 (393)
T 3kgw_A 200 -GIDIMYSSSQKVLNAPPGISLISFNDKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLA 278 (393)
T ss_dssp -TCCEEEEESSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHH
T ss_pred -CCCEEEecCcccccCCCceeEEEECHHHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHH
Confidence 789999999999988888 9999988653221 1111110 0111 011100011 1256788899999999999
Q ss_pred HHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 256 QVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 256 ~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
.+.+. +++++.++.+++.+++.+.|+++
T Consensus 279 ~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 306 (393)
T 3kgw_A 279 LIAEQ-GLENCWRRHREATAHLHKHLQEM 306 (393)
T ss_dssp HHHHH-CHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHh-hHHHHHHHHHHHHHHHHHHHHHc
Confidence 98888 99999999999999999999887
No 23
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.92 E-value=6e-24 Score=192.61 Aligned_cols=237 Identities=10% Similarity=0.012 Sum_probs=172.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCC--cccccccccccccceeee
Q 022463 28 IDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGG--HLSHGYQTDTKKISAVSI 104 (297)
Q Consensus 28 ~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~--~~~~~~~~~~~~~~~~g~ 104 (297)
..++.+.+++++++++|++++. .+++++|+ .++..++.+++++||+|+++..+|++ ... .+...|.
T Consensus 65 ~~~~~~~~~~~la~~~g~~~~~---~v~~t~g~t~al~~~~~~~~~~gd~Vl~~~~~~~~~~~~~--------~~~~~g~ 133 (393)
T 1vjo_A 65 FLALMDEIQSLLRYVWQTENPL---TIAVSGTGTAAMEATIANAVEPGDVVLIGVAGYFGNRLVD--------MAGRYGA 133 (393)
T ss_dssp HHHHHHHHHHHHHHHHTCCCSC---EEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHH--------HHHHTTC
T ss_pred HHHHHHHHHHHHHHHhCCCCCc---EEEEeCchHHHHHHHHHhccCCCCEEEEEcCChhHHHHHH--------HHHHcCC
Confidence 4567777889999999997651 28888777 57777888889999999999977766 221 1222333
Q ss_pred eeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCCC
Q 022463 105 FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 182 (297)
Q Consensus 105 ~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~~ 182 (297)
.+..+ +.+ .++.+|+++|++.+++.++++|++ +++| +|.+.|+++|.++|+++|+++|+|++|+.|..+.++...
T Consensus 134 ~~~~v--~~~-~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~ 210 (393)
T 1vjo_A 134 DVRTI--SKP-WGEVFSLEELRTALETHRPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGVPIFLDAW 210 (393)
T ss_dssp EEEEE--ECC-TTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTTTTSCCCTTTT
T ss_pred ceEEE--ecC-CCCCCCHHHHHHHHhhCCceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECCccccCcCCccccc
Confidence 34334 455 457799999999998657899888 6666 799999999999999999999999999987766554433
Q ss_pred CCCCccEEEecCCccCCCCCc-eEEEEecCchhhcc------CCccchhhHHHHhhhcccCCC-CCCCchHHHHHHHHHH
Q 022463 183 PFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK------QGKEVFYDYEEKINQAVFPGL-QGGPHNHTITGLAVAL 254 (297)
Q Consensus 183 ~~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~-~~t~~~~~~~al~~al 254 (297)
++|++++|+||++++|.+ |+++++++...++. .++.....+..... . .... .++++....+++.+++
T Consensus 211 ---~~di~~~s~sK~l~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~g~~~~~~~~a~~~al 285 (393)
T 1vjo_A 211 ---GVDLAYSCSQKGLGCSPGASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYW-G-SERVYHHTAPINLYYALREAL 285 (393)
T ss_dssp ---TCSEEECCSSSTTCSCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHH-S-TTCCCCSCCCHHHHHHHHHHH
T ss_pred ---CccEEEEcCcccccCCCceEEEEECHHHHHHHhccCCCCCceecCcHhhhhhh-c-cCCCCCCCCCHHHHHHHHHHH
Confidence 789999999999999888 99999885421110 01100000000000 0 0011 2378888999999999
Q ss_pred HHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 255 KQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 255 ~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
+.+.+. ++++++++.+++.+++.+.|+++
T Consensus 286 ~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 314 (393)
T 1vjo_A 286 RLIAQE-GLANCWQRHQKNVEYLWERLEDI 314 (393)
T ss_dssp HHHHHH-CHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHc-cHHHHHHHHHHHHHHHHHHHHHc
Confidence 988766 88999999999999999999876
No 24
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.92 E-value=1.1e-24 Score=198.95 Aligned_cols=242 Identities=15% Similarity=0.182 Sum_probs=170.4
Q ss_pred HHHHHHHHHHHHHcCC-CCCCCcceEEecCCh-HHHHHHHHHh----cCCCCeEEEecCCCCCcccccccccccccceee
Q 022463 30 MAESLCQKRALEAFRL-DPEKWGVNVQSLSGS-PSNFQVYTAL----LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS 103 (297)
Q Consensus 30 ~~e~~~~~~la~~~g~-~~~~~~~~v~~~sG~-~~~~~~~~~~----~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 103 (297)
...++.++.++++++. ++++ +++++|+ .++..++.++ +++||+|+++..+|++...++... +...|
T Consensus 72 ~~~~~l~~~la~~~~~~~~~~----v~~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~----~~~~g 143 (420)
T 1t3i_A 72 DAYEAVRNKVAKFINARSPRE----IVYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMV----AAKTG 143 (420)
T ss_dssp HHHHHHHHHHHHHTTCSCGGG----EEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHH----HHHHC
T ss_pred HHHHHHHHHHHHHcCCCCCCe----EEEcCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHH----HHhcC
Confidence 3344566999999999 5543 7777776 5777788888 899999999998888864332211 11223
Q ss_pred eeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCC
Q 022463 104 IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP 181 (297)
Q Consensus 104 ~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~ 181 (297)
..+ +.++.+ .++.+|++++++++++ ++++|++ +++| +|.+.|+++|.++|++||+++|+|++|+.|..+.+...
T Consensus 144 ~~~--~~v~~~-~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~ 219 (420)
T 1t3i_A 144 AVL--KFVQLD-EQESFDLEHFKTLLSE-KTKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQL 219 (420)
T ss_dssp CEE--EEECBC-TTSSBCHHHHHHHCCT-TEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHH
T ss_pred cEE--EEeccC-CCCCcCHHHHHHhhCC-CceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccCchhh
Confidence 333 334455 5678999999999987 8999888 6666 89999999999999999999999999998876543332
Q ss_pred CCCCCccEEEecCCccCCCCCc-eEEEEecCchhh---ccCCccchhhH-HHHhhhcccC--CCCCCCchHHHHHHHHHH
Q 022463 182 SPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI---NKQGKEVFYDY-EEKINQAVFP--GLQGGPHNHTITGLAVAL 254 (297)
Q Consensus 182 ~~~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~---~~~g~~~~~~~-~~~~~~~~~~--~~~~t~~~~~~~al~~al 254 (297)
. +.|++++|+|| +.||.| |+++++++...+ ...++...... .........+ ...++++....+++.+++
T Consensus 220 ~---~~di~~~s~sK-~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al 295 (420)
T 1t3i_A 220 I---DCDWLVASGHK-MCAPTGIGFLYGKEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAV 295 (420)
T ss_dssp H---TCSEEEEEGGG-TTSCTTCEEEEECHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHH
T ss_pred c---CCCEEEEehhh-hcCCCceEEEEEchHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHH
Confidence 2 68999999999 557777 999998754221 11111100000 0000000000 114577778888888889
Q ss_pred HHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 255 KQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 255 ~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
+.+.+. +++++.++.+++.+++.+.|++++.++
T Consensus 296 ~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~g~~ 328 (420)
T 1t3i_A 296 DYLTDL-GMENIHNYEVELTHYLWQGLGQIPQLR 328 (420)
T ss_dssp HHHHHH-CHHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred HHHHHh-HHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 988877 899999999999999999999886654
No 25
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.92 E-value=2e-24 Score=195.16 Aligned_cols=243 Identities=14% Similarity=0.078 Sum_probs=175.5
Q ss_pred HHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHh-cCCCCeEEEecCCCCCcccccccccccccceeeeeeEe
Q 022463 31 AESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFET 108 (297)
Q Consensus 31 ~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 108 (297)
...+.++.+++++|+++++ +++++|+ .++..++.++ +++||+|+++..+|++...++... +...|..+..
T Consensus 60 ~~~~l~~~la~~~g~~~~~----v~~~~g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~----~~~~g~~~~~ 131 (390)
T 1elu_A 60 LIAQLRQALAETFNVDPNT----ITITDNVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAI----AARFGITYRF 131 (390)
T ss_dssp HHHHHHHHHHHHTTSCGGG----EEEESSHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHH----HHHHCCEEEE
T ss_pred HHHHHHHHHHHHcCCCHHH----EEEeCChHHHHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHH----HHHhCcEEEE
Confidence 3445669999999998754 7777776 5777788888 899999999998888765433211 1122333434
Q ss_pred eecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHH----hcCCEEEEehhhhcccccccCCCC
Q 022463 109 MPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCN----KQKAIMLADMAHISGLVAAGVIPS 182 (297)
Q Consensus 109 v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~----~~g~~livD~a~~~g~~~~~~~~~ 182 (297)
++.+.+ +++.+|++++++.+++ ++++|++ +++| +|.+.|+++|.++|+ ++|+++|+|++|+.|..+.++...
T Consensus 132 v~~~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~~~~~~~ 209 (390)
T 1elu_A 132 FPVAAT-LNQGDAAAVLANHLGP-KTRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRL 209 (390)
T ss_dssp ECCGGG-SSSSCHHHHHHTTCCT-TEEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTTS
T ss_pred EcCCCC-CCccchHHHHHHhcCC-CceEEEEeccccCCceecCHHHHHHHHhhhhhhcCcEEEEEcccccCCcCCChhhc
Confidence 433221 3577899999999987 8899988 6777 799999999999999 999999999999988776655443
Q ss_pred CCCCccEEEecCCccCCCCCc-eEEEEecCchhh---ccCCccchhhHHHHhhhcc-----cCCCCCCCchHHHHHHHHH
Q 022463 183 PFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI---NKQGKEVFYDYEEKINQAV-----FPGLQGGPHNHTITGLAVA 253 (297)
Q Consensus 183 ~~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~---~~~g~~~~~~~~~~~~~~~-----~~~~~~t~~~~~~~al~~a 253 (297)
+.|++++|+|||+.||.| |+++++++...+ ...|+.......+. .... .....++++....+++.++
T Consensus 210 ---~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~a 285 (390)
T 1elu_A 210 ---EVDYYAFTGHKWFAGPAGVGGLYIHGDCLGEINPTYVGWRSITYGAKG-EPTGWAEGGKRFEVATSAYPQYAGLLAA 285 (390)
T ss_dssp ---CCSEEEEESSSTTCCCTTCEEEEECTTTGGGCCCCSCCTTTEEECTTS-CEEEECSGGGGGCCSCCCHHHHHHHHHH
T ss_pred ---CCCEEEccccccccCCCceEEEEECHHhHhhcCCccccCCcccccccC-cccccccchHhhCCCCCCHHHHHHHHHH
Confidence 689999999999989988 999999875322 11122110000000 0000 0011467788888888999
Q ss_pred HHHHhhhcC-hhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 254 LKQVCTLIT-FSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 254 l~~~~~~~g-~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
++.+.+. + ++++.++.+++.+++.+.|++++.++
T Consensus 286 l~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 320 (390)
T 1elu_A 286 LQLHQRQ-GTAEERYQAICQRSEFLWRGLNQLPHVH 320 (390)
T ss_dssp HHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHSTTEE
T ss_pred HHHHHHc-CCHHHHHHHHHHHHHHHHHHHHhcCCcE
Confidence 9988877 6 89999999999999999998876554
No 26
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.92 E-value=7.7e-25 Score=197.39 Aligned_cols=230 Identities=15% Similarity=0.119 Sum_probs=169.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhc----CCCCeEEEecCCCCCccccccccccccccee
Q 022463 28 IDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALL----KPHDRIMALDLPHGGHLSHGYQTDTKKISAV 102 (297)
Q Consensus 28 ~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~----~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~ 102 (297)
..+..++.++++++++|+++++ +++++|+ .++..++.++. ++||+|+++..+|++....+..+...
T Consensus 41 ~~~~~~~l~~~la~~~g~~~~~----v~~~~g~t~a~~~~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~----- 111 (382)
T 4eb5_A 41 AREAVQEAREKVAKLVNGGGGT----VVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQ----- 111 (382)
T ss_dssp HHHHHHHHHHHHHHHHTCTTEE----EEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHTTT-----
T ss_pred HHHHHHHHHHHHHHHhCCCCCe----EEEcCchHHHHHHHHHHHHhhccCCCCEEEECCCcchHHHHHHHHHHhC-----
Confidence 3455566779999999998653 7777776 57777788877 89999999999888876544322222
Q ss_pred eeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCC
Q 022463 103 SIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180 (297)
Q Consensus 103 g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~ 180 (297)
|..+ +.++.+ .++.+|++++++.+++ +|++|++ +++| +|.+.|+++|.++|++||++ |+|++|+.|..+.++.
T Consensus 112 g~~~--~~v~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~~~~ 186 (382)
T 4eb5_A 112 GFEV--EYIPVG-KYGEVDVSFIDQKLRD-DTILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQIEVDVE 186 (382)
T ss_dssp TCEE--EEECBC-TTSCBCHHHHHHHCCT-TEEEEECCSBCTTTCBBCCHHHHHHHHTTSSEE-EEECTTTBTTBCCCHH
T ss_pred CcEE--EEeccC-CCCccCHHHHHHHhcC-CCeEEEEeccCCCccccCCHHHHHHHHHHCCCE-EEEcchhcCCcccCcc
Confidence 2223 334555 4678999999999987 7888887 6666 79999999999999999999 9999999776554332
Q ss_pred CCCCCCccEEEecCCccCCCCCc-eEEEEecCchhh-ccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHHHHHHHHh
Q 022463 181 PSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI-NKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVC 258 (297)
Q Consensus 181 ~~~~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~ 258 (297)
.. ++|++++|+||+ .||.| |+++++++...+ ...++.. . .....++++...++++.++++.+.
T Consensus 187 ~~---~~di~~~s~sK~-~g~~g~G~~~~~~~~~l~~~~~~~~~--------~---~~~~~~~~~~~~~~~~~~al~~~~ 251 (382)
T 4eb5_A 187 KI---GADMLTISSNDI-YGPKGVGALWIRKEAKLQPVILGGGQ--------E---NGLRSGSENVPSIVGFGKAAEITA 251 (382)
T ss_dssp HH---TCSEEEEETGGG-TCCSSCEEEEEETTCCCCCSSCSSCT--------G---GGTSCSCCCHHHHHHHHHHHHHHH
T ss_pred cc---CCCEEEeehHHh-cCCCceEEEEEccccccCceecCCCc--------c---ccccCCCccHHHHHHHHHHHHHHH
Confidence 22 579999999997 67877 999998863211 1111100 0 011245777788888888898765
Q ss_pred hhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 259 TLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 259 ~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
. +++++.++.+++++++.+.|++++.++
T Consensus 252 -~-~~~~~~~~~~~~~~~l~~~L~~~~~~~ 279 (382)
T 4eb5_A 252 -M-EWREEAERLRRLRDRIIDNVLKIEESY 279 (382)
T ss_dssp -H-HHHHHHHHHHHHHHHHHHHHTTSTTEE
T ss_pred -H-hHHHHHHHHHHHHHHHHHHHhhCCCeE
Confidence 3 688899999999999999999887653
No 27
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.92 E-value=5.5e-24 Score=199.93 Aligned_cols=254 Identities=18% Similarity=0.129 Sum_probs=175.5
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhcC--------------CCCeEEEecCCC
Q 022463 20 RYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALLK--------------PHDRIMALDLPH 84 (297)
Q Consensus 20 ~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~~--------------~gd~Vl~~~~~~ 84 (297)
..|..++...++|+.+.+++++++|.+.+. ..+++++|+ .+|+.++.+... +++.|+++...|
T Consensus 125 ~~~~~~p~~~~le~~~~~~l~~~~g~~~~~--~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H 202 (511)
T 3vp6_A 125 FTYEIAPVFVLMEQITLKKMREIVGWSSKD--GDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSH 202 (511)
T ss_dssp SCTTTCHHHHHHHHHHHHHHHHHHTCCSSS--CEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSC
T ss_pred CCcccCchHHHHHHHHHHHHHHHhCCCCCC--CceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCch
Confidence 345567889999999999999999998421 135565555 577766665533 578899999889
Q ss_pred CCcccccccccccccceeee---eeEeeecccCCCCCcCCHHHHHHHhhhcC-----CcEEEE-cCCC-CCCcccHHHHH
Q 022463 85 GGHLSHGYQTDTKKISAVSI---FFETMPYRLNESTGYIDYDQLEKSATLFR-----PKLIVA-GASA-YARLYDYERIR 154 (297)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~l~~~~-----~~~v~~-~~~~-~G~~~~~~~i~ 154 (297)
.++...... .|. .++.+ +.+ .++.+|+++|+++|++.+ |++|++ +++| +|.+.|+++|.
T Consensus 203 ~s~~~~~~~--------~g~g~~~~~~v--~~d-~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~ 271 (511)
T 3vp6_A 203 YSIKKAGAA--------LGFGTDNVILI--KCN-ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIA 271 (511)
T ss_dssp THHHHHHHH--------TTSCGGGEEEE--CBC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHH
T ss_pred HHHHHHHHH--------cCCCCCcEEEe--ecC-CCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHH
Confidence 887654432 222 23344 455 568999999999998632 777777 5555 89999999999
Q ss_pred HHHHhcCCEEEEehhhhcccccccCCCCCC---CCccEEEecCCccCCCCCc-eEEEEecCchh-hccC---Cccchh--
Q 022463 155 KVCNKQKAIMLADMAHISGLVAAGVIPSPF---EYADVVTTTTHKSLRGPRG-AMIFFRKGVKE-INKQ---GKEVFY-- 224 (297)
Q Consensus 155 ~la~~~g~~livD~a~~~g~~~~~~~~~~~---~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~-~~~~---g~~~~~-- 224 (297)
++|++||+++|+|++|+.+....+.....+ .++|++++++||||++|.| |+++++++... +... +.....
T Consensus 272 ~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 351 (511)
T 3vp6_A 272 DICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMHASYLFQQDK 351 (511)
T ss_dssp HHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCTTTCCSSC
T ss_pred HHHHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCeEEEEEeCHHHHHHHhccCCccccCccc
Confidence 999999999999999998887543222111 2679999999999999988 99998875311 1000 000000
Q ss_pred hHHHHhhhcccCCCCCCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCccc
Q 022463 225 DYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIEE 289 (297)
Q Consensus 225 ~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~ 289 (297)
.+....... ......+.. ....+++++++.+... |++++.++..++++++.+.|++.|.++-
T Consensus 352 ~~~~~~~~~-~~~~~~~r~-~~al~~~~al~~~g~~-gl~~~~~~~~~~a~~l~~~L~~~pg~~l 413 (511)
T 3vp6_A 352 HYDVSYDTG-DKAIQCGRH-VDIFKFWLMWKAKGTV-GFENQINKCLELAEYLYAKIKNREEFEM 413 (511)
T ss_dssp SSCGGGCCG-GGSSCSSCC-CCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHSCTTEEE
T ss_pred ccccccCcc-CCCCCCCCc-hHHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 000000000 001112222 2455778888888877 9999999999999999999999887663
No 28
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.92 E-value=3.9e-24 Score=193.59 Aligned_cols=245 Identities=7% Similarity=0.006 Sum_probs=167.6
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEec-CChHHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeee
Q 022463 26 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSL-SGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 104 (297)
Q Consensus 26 ~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~-sG~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 104 (297)
+...++.+++++++++++|++. .++++ +|+.++.+++ ..+++||+|+++...|++... .......++. .
T Consensus 31 ~~~~~~~~~~~~~l~~~~~~~~-----~v~~~~sgt~a~~~~~-~~~~~gd~vi~~~~~~~~~~~-~~~~~~~g~~---~ 100 (379)
T 3ke3_A 31 KAFQEVMNDLLSNLKTVYNAEA-----AVIIPGSGTYGMEAVA-RQLTIDEDCLIIRNGWFSYRW-TQILEKGKFA---K 100 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSE-----EEEEESCHHHHHHHHH-HHHCTTCEEEEEECSHHHHHH-HHHHHHHCCS---S
T ss_pred HHHHHHHHHHHHHHHHHhCCCC-----EEEEcCChhHHHHHHH-HhCCCCCeEEEEeCCchhHHH-HHHHHHhCCC---C
Confidence 3445677788899999999973 26665 5556766555 456899999999877665311 0111111111 1
Q ss_pred eeEeeecccCC------CCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCEEEEehhhhcc
Q 022463 105 FFETMPYRLNE------STGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYD---YERIRKVCNKQKAIMLADMAHISG 173 (297)
Q Consensus 105 ~~~~v~~~~~~------~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~livD~a~~~g 173 (297)
.+..++++.+. ....+|++++++.+++.+|++|++ +..| +|.+.| +++|.++|++||+++|+|++|+ |
T Consensus 101 ~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g 179 (379)
T 3ke3_A 101 SSTVLTAERTEDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-G 179 (379)
T ss_dssp EEEEEECEESSCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-T
T ss_pred ceEEEeccccccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-C
Confidence 13333332210 013689999999996548999888 5444 798899 9999999999999999999998 7
Q ss_pred cccccCCCCCCCCccEEEecCCccCCCCCc-eEEEEecCchhhccC----Cccc-hhhHHHHhhhcccCC--CCCCCchH
Q 022463 174 LVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQ----GKEV-FYDYEEKINQAVFPG--LQGGPHNH 245 (297)
Q Consensus 174 ~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~~----g~~~-~~~~~~~~~~~~~~~--~~~t~~~~ 245 (297)
..+.+...+ ++|++++|+||+|++|.| |+++++++...++.. +... ...+.+......... ..+|++..
T Consensus 180 ~~~~~~~~~---~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~ 256 (379)
T 3ke3_A 180 CVWLDMKEL---GIDVLISAPQKGWSSTPCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTD 256 (379)
T ss_dssp TCCCCHHHH---TCSEEEECTTTTTCSCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHH
T ss_pred Ccccccccc---CCCEEEecchhhcCCCCceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHH
Confidence 666554443 789999999999999988 999998865322111 1100 001111111110001 14588999
Q ss_pred HHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCC
Q 022463 246 TITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSE 285 (297)
Q Consensus 246 ~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~ 285 (297)
.++++.+|++.+.+. |+++++++.+++.+++.+.|+++.
T Consensus 257 ~~~a~~aal~~~~~~-g~~~~~~~~~~l~~~l~~~l~~~g 295 (379)
T 3ke3_A 257 SLRQFRDAILEAKEI-GFDILRDAQWELGNRVRKVLTDKG 295 (379)
T ss_dssp HHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999988 999999999999999999998763
No 29
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.92 E-value=1.2e-23 Score=190.82 Aligned_cols=242 Identities=12% Similarity=0.029 Sum_probs=172.6
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeee
Q 022463 27 YIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 105 (297)
Q Consensus 27 ~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 105 (297)
......++.++.+++++|++++. .+++++|+ .++..++.+++++||+|+++..+|++... .. .+...|..
T Consensus 48 ~~~~~~~~l~~~la~~~~~~~~~---~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~~-~~-----~~~~~g~~ 118 (396)
T 2ch1_A 48 ELFRTMDEVKDGLRYIFQTENRA---TMCVSGSAHAGMEAMLSNLLEEGDRVLIAVNGIWAERA-VE-----MSERYGAD 118 (396)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCSC---EEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHH-HH-----HHHHTTCE
T ss_pred hHHHHHHHHHHHHHHHhCCCCCc---EEEECCcHHHHHHHHHHHhcCCCCeEEEEcCCcccHHH-HH-----HHHHcCCc
Confidence 33444556679999999998751 38887776 57777888889999999999988776520 01 12223333
Q ss_pred eEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCCCC
Q 022463 106 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 183 (297)
Q Consensus 106 ~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~~~ 183 (297)
+..+ +.+ .++.+|++++++.+++.++++|++ +++| +|.+.|+++|.++|+++|+++|+|++|+.|..+.++...
T Consensus 119 ~~~v--~~~-~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~- 194 (396)
T 2ch1_A 119 VRTI--EGP-PDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVPFYMDKW- 194 (396)
T ss_dssp EEEE--ECC-TTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTT-
T ss_pred eEEe--cCC-CCCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEccccccCCccchhhc-
Confidence 4444 455 467899999999998657999988 6666 899999999999999999999999999988776655444
Q ss_pred CCCccEEEecCCccCCCCCc-eEEEEecCchhhccC-----Cc-cch-hhHHHHhhhcc-cCCCCCCCchHHHHHHHHHH
Q 022463 184 FEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQ-----GK-EVF-YDYEEKINQAV-FPGLQGGPHNHTITGLAVAL 254 (297)
Q Consensus 184 ~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~~-----g~-~~~-~~~~~~~~~~~-~~~~~~t~~~~~~~al~~al 254 (297)
++|++++|+||++++|.| |+++++++....+.. +. ... ..+...+.... .....++++....+++.+++
T Consensus 195 --~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al 272 (396)
T 2ch1_A 195 --EIDAVYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREAL 272 (396)
T ss_dssp --TCCEEECCCC-CCCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHH
T ss_pred --CcCEEEEcCCccccCCCCeEEEEECHHHHHhhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHH
Confidence 689999999999999888 999998754222110 10 000 00001011000 01125677888888889999
Q ss_pred HHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 255 KQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 255 ~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
+.+.+. +++++.++.+++++++.+.|+++
T Consensus 273 ~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 301 (396)
T 2ch1_A 273 AQIAEE-GLENQIKRRIECAQILYEGLGKM 301 (396)
T ss_dssp HHHHHH-CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHh-hHHHHHHHHHHHHHHHHHHHHHC
Confidence 988767 89999999999999999998875
No 30
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.92 E-value=7.9e-24 Score=190.63 Aligned_cols=243 Identities=15% Similarity=0.064 Sum_probs=169.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCCcceEEecCC-hHHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeee
Q 022463 27 YIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG-SPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 105 (297)
Q Consensus 27 ~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG-~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 105 (297)
...++.+.+++++++++|++.+. ..+++++| +.++..++++++++||+|+++...+.+... .. .....|..
T Consensus 49 ~~~~~~~~~~~~la~~~g~~~~~--~~i~~~~ggt~al~~~~~~~~~~gd~vi~~~~~~~~~~~-~~-----~~~~~g~~ 120 (376)
T 3f0h_A 49 EFSSTMLENEKFMLEYAKAPEGS--KAVFMTCSSTGSMEAVVMNCFTKKDKVLVIDGGSFGHRF-VQ-----LCEIHEIP 120 (376)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTC--EEEEESSCHHHHHHHHHHHHCCTTCCEEEEESSHHHHHH-HH-----HHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHhCCCCCc--eEEEEcCChhHHHHHHHHhccCCCCeEEEEeCChhhHHH-HH-----HHHHcCCc
Confidence 33456667779999999997532 12554666 567777888899999999998754443211 01 11122333
Q ss_pred eEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCCCC
Q 022463 106 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 183 (297)
Q Consensus 106 ~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~~~ 183 (297)
+..+ +.+ .++.+|++++++.+++ +|++|++ +++| +|.+.|+++|.++|++||+++|+|++|+.+..+.+....
T Consensus 121 ~~~v--~~~-~~~~~d~~~l~~~~~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~- 195 (376)
T 3f0h_A 121 YVAL--KLE-HGKKLTKEKLYEYDNQ-NFTGLLVNVDETSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLADPFNMNEC- 195 (376)
T ss_dssp EEEE--ECC-TTCCCCHHHHHTTTTS-CCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH-
T ss_pred eEEE--eCC-CCCCCCHHHHHHhhcc-CceEEEEecccCCcceecCHHHHHHHHHHcCCEEEEEcCccccCcccccccc-
Confidence 4344 444 4578999999998876 8999988 5666 899999999999999999999999999988766544333
Q ss_pred CCCccEEEecCCccCCCCCc-eEEEEecCchhhcc---CCccchhhHHHHhhhcccCCCCCCCchHHHHHHHHHHHHHhh
Q 022463 184 FEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK---QGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 259 (297)
Q Consensus 184 ~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~ 259 (297)
++|++++|+||++++|.| |+++.+++...++. .+... .+...............+++...++++.++++.+.+
T Consensus 196 --~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~ 272 (376)
T 3f0h_A 196 --GADVMITGSQKVLACPPGISVIVLAPRGVERVEKSKVRTMY-FDLKDALKNQERGQTPFTPAVGILLQINERLKEIKK 272 (376)
T ss_dssp --TCSEEEEETTTTTCCCSSCEEEEECHHHHHHHHTCCCCCST-TCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHH
T ss_pred --CccEEEecCcccccCCCceEEEEECHHHHHHhhcCCCCcee-ecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 689999999999987888 99888886532211 11100 011111111111222456677777888999998876
Q ss_pred hcChhhHHHHhhhhHHHHHhhccCCC
Q 022463 260 LITFSHIHVFSLHVYPAFVSNQNNSE 285 (297)
Q Consensus 260 ~~g~~~~~~~~~~l~~~l~~~l~~~~ 285 (297)
..+++++.++.+++.+++.+.|++++
T Consensus 273 ~~~~~~~~~~~~~~~~~l~~~L~~~~ 298 (376)
T 3f0h_A 273 HGGADAEVARIASQAADFRAKIKDLP 298 (376)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHTTTSS
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 63589999999999999999998875
No 31
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.91 E-value=7.7e-24 Score=188.56 Aligned_cols=235 Identities=13% Similarity=0.044 Sum_probs=166.6
Q ss_pred HHHHHHHHHHHHHHcCCC--CCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeee
Q 022463 29 DMAESLCQKRALEAFRLD--PEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 105 (297)
Q Consensus 29 ~~~e~~~~~~la~~~g~~--~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 105 (297)
.+..++.++++++++|++ ++ .+++++|+ .++..++.++++ |+|+++..+|++. .+.. .+...|..
T Consensus 32 ~~~~~~l~~~la~~~g~~~~~~----~v~~t~g~t~a~~~~~~~~~~--d~vl~~~~~~~~~--~~~~----~~~~~g~~ 99 (353)
T 2yrr_A 32 LRVNRAIQERLAALFDPGEGAL----VAALAGSGSLGMEAGLANLDR--GPVLVLVNGAFSQ--RVAE----MAALHGLD 99 (353)
T ss_dssp HHHHHHHHHHHHHHHCCCTTCE----EEEESSCHHHHHHHHHHTCSC--CCEEEEECSHHHH--HHHH----HHHHTTCC
T ss_pred HHHHHHHHHHHHHHhCCCCCCc----eEEEcCCcHHHHHHHHHHhcC--CcEEEEcCCCchH--HHHH----HHHHcCCc
Confidence 455566779999999986 33 48888877 577667777766 8899988777765 1111 11222333
Q ss_pred eEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCCCC
Q 022463 106 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 183 (297)
Q Consensus 106 ~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~~~ 183 (297)
+..+ +.+ .++.+|++++++.+++.++++|++ +++| +|...|+++|.++|++||+++|+|++|+.+..+.++...
T Consensus 100 ~~~v--~~~-~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~- 175 (353)
T 2yrr_A 100 PEVL--DFP-PGEPVDPEAVARALKRRRYRMVALVHGETSTGVLNPAEAIGALAKEAGALFFLDAVTTLGMLPFSMRAM- 175 (353)
T ss_dssp EEEE--ECC-TTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHH-
T ss_pred eEEE--eCC-CCCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecCHHHHHHHHHHcCCeEEEEcCccccccccccccc-
Confidence 4344 455 457799999999998657899888 6666 799999999999999999999999999877654332222
Q ss_pred CCCccEEEecCCccCCCCCc-eEEEEecCchhhcc--CCccchhhHHHHhhhcccCCCCCCCchHHHHHHHHHHHHHhhh
Q 022463 184 FEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK--QGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 260 (297)
Q Consensus 184 ~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~ 260 (297)
++|++++|+||++++|.| |+++++++...++. .+... +..............++++...++++.++++.+.+.
T Consensus 176 --~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~ 251 (353)
T 2yrr_A 176 --GVDYAFTGSQKCLSAPPGLAPIAASLEARKAFTGKRGWYL--DLARVAEHWERGGYHHTTPVLLHYALLEALDLVLEE 251 (353)
T ss_dssp --TCSEEECCTTSTTCCCSSCEEEEECHHHHHHCCCCSCSTT--CHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred --CceEEEecCcccccCCCceEEEEECHHHHHHhccCCCccc--cHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 579999999999999888 99999886422221 01100 000000000011225678888888889999988877
Q ss_pred cChhhHHHHhhhhHHHHHhhccCC
Q 022463 261 ITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 261 ~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
|++++.++.+++.+++.+.|+++
T Consensus 252 -~~~~~~~~~~~~~~~l~~~L~~~ 274 (353)
T 2yrr_A 252 -GVAARERRAREVYAWVLEELKAR 274 (353)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHC
Confidence 89999999999999999999876
No 32
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.91 E-value=2.4e-23 Score=195.80 Aligned_cols=240 Identities=11% Similarity=-0.010 Sum_probs=177.7
Q ss_pred CCchhHHHHHHHHHHHHHHHcCCCC--CCCcceEEecCCh-HHHHHHHHHhcCCC--------CeEEEecCCCCCccccc
Q 022463 23 GGNEYIDMAESLCQKRALEAFRLDP--EKWGVNVQSLSGS-PSNFQVYTALLKPH--------DRIMALDLPHGGHLSHG 91 (297)
Q Consensus 23 ~~~~~~~~~e~~~~~~la~~~g~~~--~~~~~~v~~~sG~-~~~~~~~~~~~~~g--------d~Vl~~~~~~~~~~~~~ 91 (297)
...+...++|+++++++++++|++. ++ +..++++|+ .++..+++++.++| |+|+++...|.+.....
T Consensus 132 ~~~p~~~~le~~l~~~la~~~g~~~~~~~--v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~~ 209 (514)
T 3mad_A 132 DLWPSTAKFEAEVVAMTAHMLGGDAAGGT--VCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAA 209 (514)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTGGGGTSC--CEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHHH
T ss_pred ccChHHHHHHHHHHHHHHHHcCCCCccCC--cceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHHH
Confidence 3446678899999999999999973 33 112666666 68877888887766 99999998888864432
Q ss_pred ccccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 92 YQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 92 ~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
...|..++.+ +.+ .++.+|+++|++++++ +|++|++ +++| +|.+.|+++|.++|++||+++|+|++
T Consensus 210 --------~~~G~~v~~v--~~~-~~~~~d~~~Le~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea 277 (514)
T 3mad_A 210 --------QYFGIKLVRT--PLD-ADYRADVAAMREAITP-NTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDAC 277 (514)
T ss_dssp --------HHHTCEEEEE--CBC-TTSCBCHHHHHHHCCT-TEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECT
T ss_pred --------HHcCCeeEEe--eeC-CCCCCCHHHHHHHhcc-CCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecc
Confidence 2334334344 556 4788999999999987 8998888 6766 89999999999999999999999999
Q ss_pred hhccccc-----------ccCCCCCCCCccEEEecCCccCCCCCc-eEEEEecCchhh----ccCCccchhhHHHHhhhc
Q 022463 170 HISGLVA-----------AGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI----NKQGKEVFYDYEEKINQA 233 (297)
Q Consensus 170 ~~~g~~~-----------~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~----~~~g~~~~~~~~~~~~~~ 233 (297)
|+.+..+ .+... .++|++++|+||++.+|.+ |+++++++...+ ....+.+ ...
T Consensus 278 ~~~~~~~~~~~~g~~~~~~~~~~---~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--------~~~ 346 (514)
T 3mad_A 278 LGGFILPWAERLGYPVPPFDFRL---EGVTSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFIAADWPG--------GLY 346 (514)
T ss_dssp TTTTTHHHHHHTTCCCCCCSTTS---TTCCEEEECTTTTTCCCSSCEEEEESSHHHHTTTCEEESSCTT--------CSE
T ss_pred cccccchhHHhcCCCCCcccccC---CCCcEEEECchhccCCCCCeEEEEEeCHHHhccccccccccCC--------Ccc
Confidence 8765442 11112 2789999999999888888 999888753211 0000000 001
Q ss_pred ccCCCCCCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 234 VFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 234 ~~~~~~~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
..+...++++....+++.++++.+... +++++.++..++++++.+.|++++.++
T Consensus 347 ~~~~~~gs~~~~~~~a~~aal~~l~~~-~~~~~~~~~~~~~~~l~~~L~~~~g~~ 400 (514)
T 3mad_A 347 FSPTFAGSRPGALSATAWAAMLSLGEE-GYLDATRRILQAADRLKAGVRAIPSLK 400 (514)
T ss_dssp EESSSCSSCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTSTTCE
T ss_pred cCCccCCCCchHHHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHHhhCCCeE
Confidence 112336677778888899999988887 999999999999999999999987655
No 33
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.91 E-value=3.9e-24 Score=194.18 Aligned_cols=229 Identities=14% Similarity=0.114 Sum_probs=171.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhc----CCCC-eEEEecCCCCCcccccccccccccce
Q 022463 28 IDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALL----KPHD-RIMALDLPHGGHLSHGYQTDTKKISA 101 (297)
Q Consensus 28 ~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~----~~gd-~Vl~~~~~~~~~~~~~~~~~~~~~~~ 101 (297)
..+..++.++++++++|+++++ +++++|+ .++..++.+++ ++|| +|+++..+|+++...+..+...+
T Consensus 61 ~~~~~~~l~~~la~~~~~~~~~----v~~~~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g--- 133 (400)
T 3vax_A 61 AKRGVERAREYLASTVSAEPDE----LIFTSGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRG--- 133 (400)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGG----EEEESCHHHHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTT---
T ss_pred HHHHHHHHHHHHHHHcCCCCCc----EEEeCCHHHHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcC---
Confidence 4455666779999999998754 8888887 57776788777 8999 99999999988766554332222
Q ss_pred eeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccC
Q 022463 102 VSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV 179 (297)
Q Consensus 102 ~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~ 179 (297)
..+ +.++.+ .++.+|++++++++++ +|++|++ +++| +|.+.|+++|.++|+++|+++|+|++|+.+..+.+.
T Consensus 134 --~~~--~~v~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~ 207 (400)
T 3vax_A 134 --FEV--DFLTPG-PSGRISVEGVMERLRP-DTLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGDL 207 (400)
T ss_dssp --CEE--EEECCC-TTCCCCHHHHHTTCCT-TEEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGGG
T ss_pred --CeE--EEEccC-CCCCcCHHHHHHhcCC-CceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcCh
Confidence 223 344555 4688999999999987 8888888 6777 899999999999999999999999999988776654
Q ss_pred CCCCCCCccEEEecCCccCCCCCc-eEEE-EecCc------hhh-ccCCccchhhHHHHhhhcccCCCCCCCchHHHHHH
Q 022463 180 IPSPFEYADVVTTTTHKSLRGPRG-AMIF-FRKGV------KEI-NKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGL 250 (297)
Q Consensus 180 ~~~~~~~~D~~~~s~~K~l~gp~g-G~i~-~~~~~------~~~-~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al 250 (297)
... +|++++|+|| +.||.| |+++ ++++. ..+ ...++.. . .....++++...++++
T Consensus 208 ~~~----~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~--------~---~~~~~~~~~~~~~~a~ 271 (400)
T 3vax_A 208 TTP----IDMISISGHK-IGAPKGVGALVTRRREEMDDERVPLEPIMFGGGQ--------E---RKLRPGTLPVPLIMGL 271 (400)
T ss_dssp GSC----CSEEEEETGG-GTSCSSCEEEEECBCSSSTTCBCCCCCSSCSSCT--------G---GGTSCSCCCHHHHHHH
T ss_pred hhc----CcEEEEeHHH-hCCCCceEEEEEecchhccccccccCceecCCCc--------e---eeeecCCCCHHHHHHH
Confidence 331 7999999999 567887 9988 87731 111 1111110 0 0112567788888898
Q ss_pred HHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 251 AVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 251 ~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
.++++.+. . +++++.++.+++++++.+.|+ .+.++
T Consensus 272 ~~al~~~~-~-~~~~~~~~~~~~~~~l~~~L~-~~~~~ 306 (400)
T 3vax_A 272 AEAAKIFE-A-EHAQWQVAAQDLRSRLLAGLA-STSFQ 306 (400)
T ss_dssp HHHHHHHH-H-SHHHHHHHHHHHHHHHHHHHT-TTTCE
T ss_pred HHHHHHHH-h-hHHHHHHHHHHHHHHHHHhhC-CCCEE
Confidence 89998765 4 789999999999999999998 66654
No 34
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.91 E-value=4e-23 Score=186.31 Aligned_cols=236 Identities=11% Similarity=0.061 Sum_probs=163.6
Q ss_pred HHHHHHHHHHHcCCC----CCCCcceEEecCCh-HHHHHHHHHhc---CCCCeEEEecCCCCCcccccccccccccceee
Q 022463 32 ESLCQKRALEAFRLD----PEKWGVNVQSLSGS-PSNFQVYTALL---KPHDRIMALDLPHGGHLSHGYQTDTKKISAVS 103 (297)
Q Consensus 32 e~~~~~~la~~~g~~----~~~~~~~v~~~sG~-~~~~~~~~~~~---~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 103 (297)
....+++++++++.. ++ .+++++|+ .++..++.++. ++||+|+++...+..... .. .+...|
T Consensus 40 ~~~~~~~l~~~~~~~~~~~~~----~v~~~~g~t~al~~~~~~~~~~~~~gd~vlv~~~~~~~~~~-~~-----~~~~~g 109 (385)
T 2bkw_A 40 FQRVLKNTRAVFKSAAASKSQ----PFVLAGSGTLGWDIFASNFILSKAPNKNVLVVSTGTFSDRF-AD-----CLRSYG 109 (385)
T ss_dssp HHHHHHHHHHHTTCCGGGTCE----EEEEESCTTHHHHHHHHHHSCTTCSCCEEEEECSSHHHHHH-HH-----HHHHTT
T ss_pred HHHHHHHHHHHhCCCCCCCCc----eEEEcCchHHHHHHHHHHHhccCCCCCeEEEEcCCcchHHH-HH-----HHHHcC
Confidence 334557777777763 33 37776665 67777888887 899999887543221110 01 122233
Q ss_pred eeeEeeeccc-CCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhc--CCEEEEehhhhccccccc
Q 022463 104 IFFETMPYRL-NESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAG 178 (297)
Q Consensus 104 ~~~~~v~~~~-~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~--g~~livD~a~~~g~~~~~ 178 (297)
..+..+ +. + .++.+|++++++++++.+|++|++ +++| +|.+.|+++|.++|++| |+++|+|++|+.|..+.+
T Consensus 110 ~~~~~v--~~~~-~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~ 186 (385)
T 2bkw_A 110 AQVDVV--RPLK-IGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFE 186 (385)
T ss_dssp CEEEEE--CCSS-TTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCC
T ss_pred CceEEE--ecCC-CCCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCcccc
Confidence 334344 45 4 567899999999998657899988 6666 79999999999999999 999999999998877665
Q ss_pred CCCCCCCCccEEEecCCccCCCCCc-eEEEEecCchh-hcc-------CCccch-hhHHHHhhhcc-c-CCCCCCCchHH
Q 022463 179 VIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKE-INK-------QGKEVF-YDYEEKINQAV-F-PGLQGGPHNHT 246 (297)
Q Consensus 179 ~~~~~~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~-~~~-------~g~~~~-~~~~~~~~~~~-~-~~~~~t~~~~~ 246 (297)
+... ++|++++|+||+++||.| |+++++++... ++. .++... ..+........ . ....++++...
T Consensus 187 ~~~~---~~d~~~~s~~K~~~~~~G~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (385)
T 2bkw_A 187 FDEW---GVDFALTASQKAIGAPAGLSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQL 263 (385)
T ss_dssp TTTT---TCSEEEEESSSTTCCCSCEEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHH
T ss_pred cccc---CceEEEecCccccccCCcceEEEEcHHHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHH
Confidence 5443 689999999999999888 99999875422 110 011100 00111011110 0 11135788888
Q ss_pred HHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhc-cCC
Q 022463 247 ITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQ-NNS 284 (297)
Q Consensus 247 ~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l-~~~ 284 (297)
++++.++++.+.+. |++++.++.+++.+++.+.| +++
T Consensus 264 ~~a~~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~ 301 (385)
T 2bkw_A 264 INSLDVALKEILEE-GLHKRWDLHREMSDWFKDSLVNGL 301 (385)
T ss_dssp HHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHc-cHHHHHHHHHHHHHHHHHHHHHhc
Confidence 89999999988777 89999999999999999999 876
No 35
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.91 E-value=2.1e-23 Score=188.03 Aligned_cols=227 Identities=17% Similarity=0.186 Sum_probs=166.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhc----CCCCeEEEecCCCCCcccccccccccccceeee
Q 022463 30 MAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALL----KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 104 (297)
Q Consensus 30 ~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~----~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 104 (297)
...++.++++++++|+++++ +++++|+ .++..++.++. ++||+|+++..+|+++......+. ..|.
T Consensus 44 ~~~~~l~~~la~~~g~~~~~----v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~-----~~g~ 114 (384)
T 1eg5_A 44 LHMEKAREKVAKVLGVSPSE----IFFTSCATESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLS-----MKGF 114 (384)
T ss_dssp HHHHHHHHHHHHHHTSCGGG----EEEESCHHHHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHH-----HTTC
T ss_pred HHHHHHHHHHHHHcCCCCCe----EEEECCHHHHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHHHHH-----hcCC
Confidence 34445559999999988654 7887776 57777888876 799999999988877654442211 1232
Q ss_pred eeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcC--CEEEEehhhhcccccccCC
Q 022463 105 FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQK--AIMLADMAHISGLVAAGVI 180 (297)
Q Consensus 105 ~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g--~~livD~a~~~g~~~~~~~ 180 (297)
.+ +.++.+ .++.+|+++|++.+++ ++++|++ +++| +|.+.|+++|.++|+++| +++|+|++|+.|..+.++.
T Consensus 115 ~~--~~v~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~~~~ 190 (384)
T 1eg5_A 115 KV--KYVPVD-SRGVVKLEELEKLVDE-DTFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLE 190 (384)
T ss_dssp EE--EECCBC-TTSCBCHHHHHHHCCT-TEEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCCCT
T ss_pred EE--EEEccC-CCCccCHHHHHHHhCC-CCeEEEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCcccCch
Confidence 23 344555 4578999999999987 8999988 6766 799999999999999999 9999999998776655443
Q ss_pred CCCCCCccEEEecCCccCCCCCc-eEEEEecCchhh-ccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHHHHHHHHh
Q 022463 181 PSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI-NKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVC 258 (297)
Q Consensus 181 ~~~~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~ 258 (297)
.. ++|++++|+||+ .||.| |+++++++.+.. ...++.. . .....++++.+..+++.++++.+.
T Consensus 191 ~~---~~di~~~s~sK~-~g~~G~G~~~~~~~~~~~~~~~~~~~---------~--~~~~~~~~~~~~~~a~~~al~~~~ 255 (384)
T 1eg5_A 191 KL---EVDYASFSAHKF-HGPKGVGITYIRKGVPIRPLIHGGGQ---------E--RGLRSGTQNVPGIVGAARAMEIAV 255 (384)
T ss_dssp TT---CCSEEEEEGGGG-TSCTTCEEEEECTTSCCCCSBCSSCT---------T--TTTBCSCCCHHHHHHHHHHHHHHH
T ss_pred hc---CCCEEEecHHHh-cCCCceEEEEEcCCCccccccccCcc---------c--ccccCCCCChHHHHHHHHHHHHHH
Confidence 33 689999999997 57777 999998863111 1111000 0 001245778888888888888754
Q ss_pred hhcChhhHHHHhhhhHHHHHhhccCCCCc
Q 022463 259 TLITFSHIHVFSLHVYPAFVSNQNNSENI 287 (297)
Q Consensus 259 ~~~g~~~~~~~~~~l~~~l~~~l~~~~~~ 287 (297)
. .++++.++.+++.+++.+.|++ +.+
T Consensus 256 -~-~~~~~~~~~~~~~~~l~~~L~~-~g~ 281 (384)
T 1eg5_A 256 -E-ELSEAAKHMEKLRSKLVSGLMN-LGA 281 (384)
T ss_dssp -H-THHHHHHHHHHHHHHHHHHHHT-TTC
T ss_pred -H-hHHHHHHHHHHHHHHHHHHhCC-CCe
Confidence 3 6788999999999999999987 443
No 36
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.91 E-value=2.1e-25 Score=201.98 Aligned_cols=231 Identities=10% Similarity=0.034 Sum_probs=159.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcceEEe-c-CChHHHHHHHHHhcCCCCeEEEecCCCCCcccccccc-cccccceeeee
Q 022463 29 DMAESLCQKRALEAFRLDPEKWGVNVQS-L-SGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQT-DTKKISAVSIF 105 (297)
Q Consensus 29 ~~~e~~~~~~la~~~g~~~~~~~~~v~~-~-sG~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-~~~~~~~~g~~ 105 (297)
.++-+.+|+.+++++|++.++ .|+| + +||.++..++.+++++||+|++...++.++ ++... ... | .
T Consensus 71 ~~~~~~ar~~la~ll~~~~~~---evif~t~~~T~a~n~ai~~l~~~gd~v~~~~~~~~~~--~~~~~a~~~-----G-~ 139 (386)
T 3qm2_A 71 IQVAEEAEQDFRDLLNIPSNY---KVLFCHGGGRGQFAGVPLNLLGDKTTADYVDAGYWAA--SAIKEAKKY-----C-A 139 (386)
T ss_dssp --CCHHHHHHHHHHHTCCTTE---EEEEEESCTTHHHHHHHHHHCTTCCEEEEEESSHHHH--HHHHHHTTT-----S-E
T ss_pred HHHHHHHHHHHHHHhCCCCCc---eEEEEcCCchHHHHHHHHhccCCCCeEEEEeCCHHHH--HHHHHHHHh-----C-C
Confidence 344456789999999996432 3666 4 445566668888999999988776665555 23221 222 3 3
Q ss_pred eEeeecccCCCCCc-CCHHHHHHHhhhcCCcEEEE-c-CCCCCCc-ccHHHHHHHHHhcCCEEEEehhhhcccccccCCC
Q 022463 106 FETMPYRLNESTGY-IDYDQLEKSATLFRPKLIVA-G-ASAYARL-YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP 181 (297)
Q Consensus 106 ~~~v~~~~~~~~~~-~d~~~l~~~l~~~~~~~v~~-~-~~~~G~~-~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~ 181 (297)
+..++++. ++.+. +|+++++..+++ +|++|.+ + .+.+|.. .|+++|. +|+++++|++|++|..|+++..
T Consensus 140 v~~v~~~~-~~~G~~~~~~~~~~~l~~-~t~lV~~~h~et~tG~~i~pi~~i~-----~g~~~~vDa~qs~g~~pidv~~ 212 (386)
T 3qm2_A 140 PQIIDAKI-TVDGKRAVKPMREWQLSD-NAAYLHYCPNETIDGIAIDETPDFG-----PEVVVTADFSSTILSAPLDVSR 212 (386)
T ss_dssp EEEEECEE-EETTEEEECCGGGCCCCT-TCSCEEECSEETTTTEECCCCCCCC-----TTCCEEEECTTTTTSSCCCGGG
T ss_pred eEEEecCc-ccCCCCCCchHHHhhcCC-CCcEEEEECCcCCcCEecCchhhhc-----CCCEEEEEcccccCCCCCCccc
Confidence 44554330 01233 677788888877 8999988 4 4447985 8999885 8999999999999999999887
Q ss_pred CCCCCccEEEecCCccCCCCCc-eEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHHHHHHHHhhh
Q 022463 182 SPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 260 (297)
Q Consensus 182 ~~~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~ 260 (297)
+ |++++|+|||+ ||.| |+++++++...+.....+...++..... ...+.+||+++.++++.+|++++.+.
T Consensus 213 ~-----~~~~~s~hK~l-GP~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~---~~~~~gTp~v~~i~~l~~Al~~~~~~ 283 (386)
T 3qm2_A 213 Y-----GVIYAGAQKNI-GPAGLTLVIVREDLLGKAHESCPSILDYTVLND---NDSMFNTPPTFAWYLSGLVFKWLKAQ 283 (386)
T ss_dssp C-----SEEEEETTTTT-CCTTEEEEEEEGGGCSCCCTTSCGGGCHHHHHH---C-------CCSHHHHHHHHHHHHHHH
T ss_pred c-----CEEEEeccccc-CCCccEEEEECHHHHhhhcccCCcHHHHHHHhh---cCCCCCCCcHHHHHHHHHHHHHHHHh
Confidence 6 56789999999 7999 9999999763321110011111221111 12235799999999999999999877
Q ss_pred cChhhHHHHhhhhHHHHHhhccCCCC
Q 022463 261 ITFSHIHVFSLHVYPAFVSNQNNSEN 286 (297)
Q Consensus 261 ~g~~~~~~~~~~l~~~l~~~l~~~~~ 286 (297)
.|+++++++.+.+.++++++|++++.
T Consensus 284 gG~~~i~~~~~~l~~~l~~~l~~~~~ 309 (386)
T 3qm2_A 284 GGVAAMHKINQQKAELLYGVIDNSDF 309 (386)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHTCSS
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 57999999999999999999998753
No 37
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.91 E-value=1.6e-23 Score=186.77 Aligned_cols=232 Identities=12% Similarity=0.048 Sum_probs=163.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeeeeEe
Q 022463 30 MAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFET 108 (297)
Q Consensus 30 ~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 108 (297)
+..++.++++++++|++++ .+++++|+ .++..++.+++++||+|+++..+|++.. ...... ..|..+..
T Consensus 34 ~~~~~l~~~la~~~g~~~~----~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~-~~~~~~-----~~g~~~~~ 103 (352)
T 1iug_A 34 EVFLKARGLLREAFRTEGE----VLILTGSGTLAMEALVKNLFAPGERVLVPVYGKFSER-FYEIAL-----EAGLVVER 103 (352)
T ss_dssp HHHHHHHHHHHHHHTCSSE----EEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHH-HHHHHH-----HTTCEEEE
T ss_pred HHHHHHHHHHHHHhCCCCc----eEEEcCchHHHHHHHHHhccCCCCeEEEEeCCchhHH-HHHHHH-----HcCCceEE
Confidence 3444566999999999864 37777666 5777788888999999999998887763 111111 12323434
Q ss_pred eecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhc--CCEEEEehhhhcccccccCCCCCC
Q 022463 109 MPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAGVIPSPF 184 (297)
Q Consensus 109 v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~--g~~livD~a~~~g~~~~~~~~~~~ 184 (297)
+ +.+ .++.+|++++++ + ++++|++ +++| +|.+.|+++|.++|++| |+++|+|++|+.|..+.++...
T Consensus 104 v--~~~-~~~~~d~~~l~~---~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~-- 174 (352)
T 1iug_A 104 L--DYP-YGDTPRPEDVAK---E-GYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMVTSLLVGEVALEAM-- 174 (352)
T ss_dssp E--ECC-TTCCCCTTTSCC---S-SCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTTTBTTBCCCSGGG--
T ss_pred E--eCC-CCCCCCHHHHhc---c-CCcEEEEEEecCCcceecCHHHHHHHHHhhCCCCEEEEECCccccCcceecccc--
Confidence 4 444 456788888877 4 7899888 6666 79999999999999999 9999999999987766554332
Q ss_pred CCccEEEecCCccCCCCCc-eEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHHHHHHHHhhhcCh
Q 022463 185 EYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITF 263 (297)
Q Consensus 185 ~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~g~ 263 (297)
++|++++|+|||+.+|.| |+++++++...+...+... .++...+.........++++...++++.++++.+.+. +
T Consensus 175 -~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~--~ 250 (352)
T 1iug_A 175 -GVDAAASGSQKGLMCPPGLGFVALSPRALERLKPRGYY-LDLARELKAQKEGESAWTPAINLVLAVAAVLEEVLPR--L 250 (352)
T ss_dssp -TCSEEEEESSSTTCCCSCEEEEEECHHHHHTCCCCSST-TCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGG--H
T ss_pred -CeeEEEecCcccccCCCceeEEEECHHHHHHhhCCCce-eeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHHHH--H
Confidence 689999999999999988 9999887532111111100 0111111111111225678888888888999876543 7
Q ss_pred hhHHHHhhhhHHHHHhhccCC
Q 022463 264 SHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 264 ~~~~~~~~~l~~~l~~~l~~~ 284 (297)
++++++.+++++++.+.|+++
T Consensus 251 ~~~~~~~~~~~~~l~~~L~~~ 271 (352)
T 1iug_A 251 EEHLALKAWQNALLYGVGEEG 271 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHC
Confidence 788888999999999988876
No 38
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1e-23 Score=197.30 Aligned_cols=247 Identities=15% Similarity=0.106 Sum_probs=176.8
Q ss_pred CCCchhHHHHHHHHHHHHHHHcCCC--CCCCcceEEecCCh-HHHHHHHHHhcC-----CC---CeEEEecCCCCCcccc
Q 022463 22 YGGNEYIDMAESLCQKRALEAFRLD--PEKWGVNVQSLSGS-PSNFQVYTALLK-----PH---DRIMALDLPHGGHLSH 90 (297)
Q Consensus 22 ~~~~~~~~~~e~~~~~~la~~~g~~--~~~~~~~v~~~sG~-~~~~~~~~~~~~-----~g---d~Vl~~~~~~~~~~~~ 90 (297)
+...+...++++++++++++++|++ ++ .+++++|+ .++..++.++.+ +| |+|+++...|.++...
T Consensus 99 ~~~~~~~~~l~~~~~~~la~~~g~~~~~~----~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~h~~~~~~ 174 (497)
T 3mc6_A 99 PDVFPAVRKMESEVVSMVLRMFNAPSDTG----CGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFDKA 174 (497)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHTTCCTTTC----CEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEETTSCHHHHHH
T ss_pred cccChHHHHHHHHHHHHHHHHhCCCCCCC----eEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCccHHHHHH
Confidence 3445678899999999999999998 33 36666666 577767777654 56 8999999888776443
Q ss_pred cccccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEeh
Q 022463 91 GYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 91 ~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~ 168 (297)
. ...|..++.+ +.+++++.+|+++|++++++ +|++|++ +++| +|.+.|+++|.++|++||+++|+|+
T Consensus 175 ~--------~~~G~~~~~v--~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~ 243 (497)
T 3mc6_A 175 A--------YYFGMKLRHV--ELDPTTYQVDLGKVKKFINK-NTVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDS 243 (497)
T ss_dssp H--------HHSCCEEEEE--CBCTTTCSBCTTTTGGGCCS-SEEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEET
T ss_pred H--------HHcCCeEEEE--ecCcccCcCCHHHHHHHHhh-CCEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEEC
Confidence 3 2334434444 45534788999999999987 8888888 6766 8999999999999999999999999
Q ss_pred hhhcccccc----c---C--CCCCCCCccEEEecCCccCCCCCc-eEEEEecCchhhccCCccchhhHHHHhhhcccCCC
Q 022463 169 AHISGLVAA----G---V--IPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGL 238 (297)
Q Consensus 169 a~~~g~~~~----~---~--~~~~~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 238 (297)
+|+.+..++ + . ......++|++++++||++.+|.+ |+++++++...+....... .+. ......+..
T Consensus 244 a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~ 319 (497)
T 3mc6_A 244 CLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNP--AWT--GGLYGSPTL 319 (497)
T ss_dssp TTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEECSSHHHHTTTSCCBT--TCT--TSCBCCSSS
T ss_pred cchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCCCceeEEecCHHHHhhhhcccc--ccc--CCCcCCcCc
Confidence 998655431 0 1 111112799999999999988888 9999887531110000000 000 000011222
Q ss_pred CCCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccC-CCCcc
Q 022463 239 QGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNN-SENIE 288 (297)
Q Consensus 239 ~~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~-~~~~~ 288 (297)
.++.+...++++.++++.+... |++++.++..++++++.+.|++ ++.++
T Consensus 320 ~g~~~~~~~~a~~aal~~l~~~-~~~~~~~~~~~~~~~l~~~L~~~~~g~~ 369 (497)
T 3mc6_A 320 AGSRPGAIVVGCWATMVNMGEN-GYIESCQEIVGAAMKFKKYIQENIPDLD 369 (497)
T ss_dssp CSSCBHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSCTTCE
T ss_pred ccCCcchhHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 4566667788899999999888 9999999999999999999999 57765
No 39
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.90 E-value=3.5e-23 Score=194.75 Aligned_cols=252 Identities=13% Similarity=0.066 Sum_probs=171.6
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhc-------C-CCC------eEEEecCCC
Q 022463 20 RYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALL-------K-PHD------RIMALDLPH 84 (297)
Q Consensus 20 ~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~-------~-~gd------~Vl~~~~~~ 84 (297)
..|...+...++|+++++++++++|++.+ .+++++|+ .+|+.++.++. + +|| +|+++..+|
T Consensus 138 ~~~~~s~~~~~le~~~~~~la~l~g~~~~----~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h 213 (515)
T 2jis_A 138 YTYEIAPVFVLMEEEVLRKLRALVGWSSG----DGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECH 213 (515)
T ss_dssp TCTTTCHHHHHHHHHHHHHHHHHHTCSSC----EEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSC
T ss_pred CchhhchHHHHHHHHHHHHHHHHhCCCCC----CeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCcc
Confidence 34555678889999999999999999854 37776666 57776666552 2 576 889988889
Q ss_pred CCcccccccccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhc-----CCcEEEE-cCCC-CCCcccHHHHHHHH
Q 022463 85 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-----RPKLIVA-GASA-YARLYDYERIRKVC 157 (297)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~-----~~~~v~~-~~~~-~G~~~~~~~i~~la 157 (297)
++....+..... +. ..++.+ +.+ +++.+|+++|++++++. +|++|++ +++| +|.+.|+++|.++|
T Consensus 214 ~s~~~~~~~~g~-g~----~~v~~v--~~~-~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la 285 (515)
T 2jis_A 214 YSIQKGAAFLGL-GT----DSVRVV--KAD-ERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVC 285 (515)
T ss_dssp THHHHHHHHTTS-CG----GGEEEE--CBC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHH
T ss_pred HHHHHHHHHcCC-CC----CcEEEE--ecC-CCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHH
Confidence 888655443221 10 024344 455 57899999999999863 4788888 5655 89999999999999
Q ss_pred HhcCCEEEEehhhhcccccccCCCCCC---CCccEEEecCCccCCCCCc-eEEEEecC--chhhc-------cCCccchh
Q 022463 158 NKQKAIMLADMAHISGLVAAGVIPSPF---EYADVVTTTTHKSLRGPRG-AMIFFRKG--VKEIN-------KQGKEVFY 224 (297)
Q Consensus 158 ~~~g~~livD~a~~~g~~~~~~~~~~~---~~~D~~~~s~~K~l~gp~g-G~i~~~~~--~~~~~-------~~g~~~~~ 224 (297)
+++|+++|+|++++.+..+.+.....+ .++|++++++|||+++|.| |+++++++ ...+. ..++..
T Consensus 286 ~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~-- 363 (515)
T 2jis_A 286 QRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQASYLFQQDK-- 363 (515)
T ss_dssp HHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESCCSCHHHHHHCC---------C--
T ss_pred HHcCCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEeChHHHHHHHhcCCchhccCCcc--
Confidence 999999999999998887654222111 2689999999999999998 99999876 31110 000000
Q ss_pred hHHHHhhhcccCCCCCCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 225 DYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 225 ~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
......... .+....+... ...+++++++.+... |++++.++..++++++.+.|++.+.++
T Consensus 364 ~~~~~~~~~-~~~~~~~rr~-~al~~~~~l~~lg~~-g~~~~~~~~~~~a~~l~~~L~~~~g~~ 424 (515)
T 2jis_A 364 FYDVALDTG-DKVVQCGRRV-DCLKLWLMWKAQGDQ-GLERRIDQAFVLARYLVEEMKKREGFE 424 (515)
T ss_dssp CSCGGGCCG-GGCSCSSCCC-CHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTSTTEE
T ss_pred cccccCCCC-CCCCCCCCcc-cHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 000000000 0011111111 123455567777766 999999999999999999999988765
No 40
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.90 E-value=4.8e-23 Score=190.67 Aligned_cols=247 Identities=10% Similarity=-0.014 Sum_probs=171.8
Q ss_pred CCchhHHHHHHHHHHHHHHHcCCCCCC--CcceEEecCCh-HHHHHHHHHhcC--------CC-----CeEEEecCCCCC
Q 022463 23 GGNEYIDMAESLCQKRALEAFRLDPEK--WGVNVQSLSGS-PSNFQVYTALLK--------PH-----DRIMALDLPHGG 86 (297)
Q Consensus 23 ~~~~~~~~~e~~~~~~la~~~g~~~~~--~~~~v~~~sG~-~~~~~~~~~~~~--------~g-----d~Vl~~~~~~~~ 86 (297)
...+...++++++++++++++|++.++ . ..+++++|+ .+++.++.++.. +| ++|+++. .|.+
T Consensus 74 ~~~~~~~~l~~~~~~~la~l~g~~~~~~~~-~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~ 151 (452)
T 2dgk_A 74 EEYPQSAAIDLRCVNMVADLWHAPAPKNGQ-AVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQIC 151 (452)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCCCCTTSC-CEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHH
T ss_pred hhChhHHHHHHHHHHHHHHHhCCCcccccC-CceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHH
Confidence 345778899999999999999998642 0 125666666 577766666643 55 5899988 7766
Q ss_pred cccccccccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhc----
Q 022463 87 HLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQ---- 160 (297)
Q Consensus 87 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~---- 160 (297)
..... ...|..++.+ +.+++++.+|+++|+++|++ +|++|++ +++| +|.+.|+++|.++|+++
T Consensus 152 ~~~~~--------~~~G~~v~~v--~~~~~~~~~d~~~l~~~i~~-~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~ 220 (452)
T 2dgk_A 152 WHKFA--------RYWDVELREI--PMRPGQLFMDPKRMIEACDE-NTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADT 220 (452)
T ss_dssp HHHHH--------HHTTCEEEEC--CCBTTBCSCCHHHHHHHCCT-TEEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHH
T ss_pred HHHHH--------HHcCceEEEE--ecCCCCCeECHHHHHHHHhh-CCEEEEEEcCCcCCcccCCHHHHHHHHHHHhhcc
Confidence 54322 2334334444 55533689999999999987 8888888 5666 89999999999999996
Q ss_pred --CCEEEEehhhhcccccc--cCCCCC--CCCccEEEecCCccCCCCCc-eEEEEecCchh-hccCCccchhhHHHHhhh
Q 022463 161 --KAIMLADMAHISGLVAA--GVIPSP--FEYADVVTTTTHKSLRGPRG-AMIFFRKGVKE-INKQGKEVFYDYEEKINQ 232 (297)
Q Consensus 161 --g~~livD~a~~~g~~~~--~~~~~~--~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~-~~~~g~~~~~~~~~~~~~ 232 (297)
|+++|+|++++.+..++ +..+.. ..++|++++++|||+.+|.+ |+++++++... +...-.. .+.. ..
T Consensus 221 ~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~~~~~G~~~~~~~~~~~~~~~~~~---~~~~--~~ 295 (452)
T 2dgk_A 221 GIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNV---DYLG--GQ 295 (452)
T ss_dssp CCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEE---CCTT--CC
T ss_pred CCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcEEEECcccccCCCCCeEEEEEcCHHHHHHHhccCc---cccC--CC
Confidence 99999999998776532 111111 23799999999999988888 99999764211 1000000 0000 00
Q ss_pred cccCCCCCCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 233 AVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 233 ~~~~~~~~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
.......++.+.....++.++++.+... |++++.++..++++++.+.|++.+.++
T Consensus 296 ~~~~~~~~~r~~~~~~~~~aal~~lg~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~ 350 (452)
T 2dgk_A 296 IGTFAINFSRPAGQVIAQYYEFLRLGRE-GYTKVQNASYQVAAYLADEIAKLGPYE 350 (452)
T ss_dssp EEECCSCCSCBCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSSEE
T ss_pred CCCcccCCCChhHHHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 0011124455665677788888888777 999999999999999999999988654
No 41
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.90 E-value=1.3e-22 Score=183.25 Aligned_cols=237 Identities=11% Similarity=0.023 Sum_probs=168.5
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhcCC-------------CCeEEEecCCCCCccccc
Q 022463 26 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALLKP-------------HDRIMALDLPHGGHLSHG 91 (297)
Q Consensus 26 ~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~-------------gd~Vl~~~~~~~~~~~~~ 91 (297)
+...++++++++++++++|+++++ +++++|+ .++..++.++..+ ||+|+++..+|++.....
T Consensus 65 ~~~~~~~~~l~~~la~~~~~~~~~----i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~ 140 (397)
T 3f9t_A 65 KGTKLLEEKAVALLGSLLNNKDAY----GHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGR 140 (397)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCE----EEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHhCCCCCC----EEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHH
Confidence 356778888889999999998764 7777766 5777778877655 999999998888865433
Q ss_pred ccccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 92 YQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 92 ~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
. ..|..+ +.++.+ .++.+|++++++.+++.++++|++ +++| +|.+.|+++|.++|++||+++|+|++
T Consensus 141 ~--------~~g~~~--~~v~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea 209 (397)
T 3f9t_A 141 E--------MMDLEY--IYAPIK-EDYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAA 209 (397)
T ss_dssp H--------HHTCEE--EEECBC-TTSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECT
T ss_pred H--------HcCcee--EEEeeC-CCCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEcc
Confidence 2 233334 334555 468899999999998657888888 6667 89999999999999999999999999
Q ss_pred hhcccccccCC-------CCCCC---CccEEEecCCccCCCCCc-eEEEEecCchhhccCCccchhhHHHHhhhcccCCC
Q 022463 170 HISGLVAAGVI-------PSPFE---YADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGL 238 (297)
Q Consensus 170 ~~~g~~~~~~~-------~~~~~---~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 238 (297)
|+.+..+.... ..+++ ++|++++|+||++++|.+ |+++++++...+.... ....+........
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~~~~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 283 (397)
T 3f9t_A 210 FGGLVIPFLDDKYKKKGVNYKFDFSLGVDSITIDPHKMGHCPIPSGGILFKDIGYKRYLDV------DAPYLTETRQATI 283 (397)
T ss_dssp TGGGTGGGCCGGGCCTTCCCCCSGGGTCSEEECCTTTTTCCCSSCEEEEESSGGGGGGTCE------ECTTSSSSEECSS
T ss_pred ccchhhhhcccccccccccccccccccCCeEEEccccccCCCCCceEEEEeCHHHHHhhcc------CCccccCCCcccc
Confidence 98766543211 00111 689999999999977766 8888877531110000 0000000000111
Q ss_pred CCCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 239 QGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 239 ~~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
.++++.....++.+++..+... +++++.++.+++.+++.+.|++.
T Consensus 284 ~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 328 (397)
T 3f9t_A 284 LGTRVGFGGACTYAVLRYLGRE-GQRKIVNECMENTLYLYKKLKEN 328 (397)
T ss_dssp CSSCCSHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccccchHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHHHHC
Confidence 3455555677888888888777 88999999999999999999887
No 42
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.90 E-value=5.4e-23 Score=192.79 Aligned_cols=249 Identities=10% Similarity=0.011 Sum_probs=174.7
Q ss_pred CCchhHHHHHHHHHHHHHHHcCCC--CCCCcceEEecCChHHHHHHHHHhcCC--------CC-----eEEEecCCCCCc
Q 022463 23 GGNEYIDMAESLCQKRALEAFRLD--PEKWGVNVQSLSGSPSNFQVYTALLKP--------HD-----RIMALDLPHGGH 87 (297)
Q Consensus 23 ~~~~~~~~~e~~~~~~la~~~g~~--~~~~~~~v~~~sG~~~~~~~~~~~~~~--------gd-----~Vl~~~~~~~~~ 87 (297)
...+...++|+.+++++++++|++ +++....+++++|+.+++.++.++..+ |+ +|+++..+|.+.
T Consensus 88 ~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~ 167 (502)
T 3hbx_A 88 DEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCW 167 (502)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHH
T ss_pred hcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHH
Confidence 344668899999999999999998 443211233445556777666666544 76 899998888775
Q ss_pred ccccccccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhc-----
Q 022463 88 LSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQ----- 160 (297)
Q Consensus 88 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~----- 160 (297)
... +...|..++.+ +.+++++.+|++++++++++ +|++|++ +++| +|.+.|+++|.++|+++
T Consensus 168 ~~~--------~~~~G~~~~~v--~~~~~~~~~d~~~l~~~i~~-~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~ 236 (502)
T 3hbx_A 168 EKF--------ARYFEVELKEV--KLSEGYYVMDPQQAVDMVDE-NTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETG 236 (502)
T ss_dssp HHH--------HHHTTCEEEEE--CCBTTBCSCCHHHHHHHCCT-TEEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHC
T ss_pred HHH--------HHHcCceeEEE--ecCCCcCcCCHHHHHHHHhh-CCEEEEEecCCCCCCcccCHHHHHHHHHHhhhccC
Confidence 432 23334444444 45544589999999999998 8888877 6666 79999999999999999
Q ss_pred -CCEEEEehhhhcccccc--cCCCCC--CCCccEEEecCCccCCCCCc-eEEEEecCchh-hccCCccchhhHHHHhhhc
Q 022463 161 -KAIMLADMAHISGLVAA--GVIPSP--FEYADVVTTTTHKSLRGPRG-AMIFFRKGVKE-INKQGKEVFYDYEEKINQA 233 (297)
Q Consensus 161 -g~~livD~a~~~g~~~~--~~~~~~--~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~-~~~~g~~~~~~~~~~~~~~ 233 (297)
|+++|+|+||+.+..++ +..++. ..++|++++++|||+.+|.| |+++++++... ....-.. .+ +...
T Consensus 237 ~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g~G~~~~~~~~~l~~~~~~~~---~y---l~~~ 310 (502)
T 3hbx_A 237 WDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHI---NY---LGAD 310 (502)
T ss_dssp CCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEE---CS---SSSC
T ss_pred CCCeEEEECCccchhhhhhCcccccccCCCCceEEEECcccccCCCCCeEEEEEeCHHHhhHHhccCc---cc---ccCC
Confidence 99999999998665332 111111 12899999999999999999 88888764211 1000000 00 0000
Q ss_pred -ccCCCCCCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCccc
Q 022463 234 -VFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIEE 289 (297)
Q Consensus 234 -~~~~~~~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~ 289 (297)
......++.+...++++.+++..+... |++.+.++..+++++|.+.|++.+.++-
T Consensus 311 ~~~~~~~~sr~~~~~~a~~~al~~lg~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~ 366 (502)
T 3hbx_A 311 QPTFTLNFSKGSSQVIAQYYQLIRLGHE-GYRNVMENCRENMIVLREGLEKTERFNI 366 (502)
T ss_dssp EEECCSCCSCBSHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred CCCccccCCchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 001123455556778888999988888 9999999999999999999999986553
No 43
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.90 E-value=7.8e-23 Score=191.82 Aligned_cols=250 Identities=18% Similarity=0.128 Sum_probs=168.8
Q ss_pred cCCCchhHHHHHHHHHHHHHHHcCCC--CCCCcceEEecCCh-HHHHHHHHHhc--------CCC-----C-eEEEecCC
Q 022463 21 YYGGNEYIDMAESLCQKRALEAFRLD--PEKWGVNVQSLSGS-PSNFQVYTALL--------KPH-----D-RIMALDLP 83 (297)
Q Consensus 21 ~~~~~~~~~~~e~~~~~~la~~~g~~--~~~~~~~v~~~sG~-~~~~~~~~~~~--------~~g-----d-~Vl~~~~~ 83 (297)
.|...+...++|+.+++++++++|++ .+ .+++++|+ .++..++.++. ++| + +|+++..+
T Consensus 123 ~~~~~~~~~~le~~~~~~la~~~g~~~~~~----~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~ 198 (504)
T 2okj_A 123 TYEIAPVFVLMEQITLKKMREIVGWSSKDG----DGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQS 198 (504)
T ss_dssp CTTTCHHHHHHHHHHHHHHHHHHTCCSSSC----EEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTS
T ss_pred chhhChHHHHHHHHHHHHHHHHhCCCCCCC----CEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcc
Confidence 34455778899999999999999997 43 37776666 57776666653 256 6 78888888
Q ss_pred CCCcccccccccccccceeee-eeEeeecccCCCCCcCCHHHHHHHhhhc-----CCcEEEE-cCCC-CCCcccHHHHHH
Q 022463 84 HGGHLSHGYQTDTKKISAVSI-FFETMPYRLNESTGYIDYDQLEKSATLF-----RPKLIVA-GASA-YARLYDYERIRK 155 (297)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~-~~~~v~~~~~~~~~~~d~~~l~~~l~~~-----~~~~v~~-~~~~-~G~~~~~~~i~~ 155 (297)
|.++...+..+.. |. .++.+ +.+ +++.+|+++|+++|++. +|++|++ +++| +|.+.|+++|.+
T Consensus 199 h~s~~~~~~~~g~------g~~~v~~v--~~~-~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~ 269 (504)
T 2okj_A 199 HYSIKKAGAALGF------GTDNVILI--KCN-ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIAD 269 (504)
T ss_dssp CTHHHHHHHHTTS------CGGGEEEE--CBC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHH
T ss_pred hHHHHHHHHHcCC------CcccEEEE--ecC-CCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHH
Confidence 9887655443221 11 24344 455 57899999999999763 4788888 5655 899999999999
Q ss_pred HHHhcCCEEEEehhhhcccccccCCCCC---CCCccEEEecCCccCCCCCc-eEEEEecC-chhh---c----cCCccch
Q 022463 156 VCNKQKAIMLADMAHISGLVAAGVIPSP---FEYADVVTTTTHKSLRGPRG-AMIFFRKG-VKEI---N----KQGKEVF 223 (297)
Q Consensus 156 la~~~g~~livD~a~~~g~~~~~~~~~~---~~~~D~~~~s~~K~l~gp~g-G~i~~~~~-~~~~---~----~~g~~~~ 223 (297)
+|++||+++|+|++++.+.......... ..++|++++++|||+++|.+ |+++++++ ...+ . ..++...
T Consensus 270 la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~ 349 (504)
T 2okj_A 270 ICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQ 349 (504)
T ss_dssp HHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCSSSCCSCCS
T ss_pred HHHHcCCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEECHHHHHHHhcCCCccccCCccc
Confidence 9999999999999998887653211111 12689999999999998988 99999874 2111 0 1010000
Q ss_pred hhHHHHhhhcccCCCCCCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 224 YDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 224 ~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
... ....... ....+... ...+++++++.+... |++++.++..++++++.+.|++.+.++
T Consensus 350 ~~~--~~~~~~~-~~~~~rr~-~~l~~~a~l~~lg~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~ 409 (504)
T 2okj_A 350 YDV--SYDTGDK-AIQCGRHV-DIFKFWLMWKAKGTV-GFENQINKCLELAEYLYAKIKNREEFE 409 (504)
T ss_dssp SCG--GGCCGGG-SSCSSCBC-CHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHTTCTTEE
T ss_pred ccC--cCCcccC-CCCCCCCc-cHHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 000 0000000 00111111 122445556666666 899999999999999999999988765
No 44
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.90 E-value=1e-23 Score=189.31 Aligned_cols=254 Identities=12% Similarity=0.050 Sum_probs=165.3
Q ss_pred ccccccccccCCCCCCCCc-cCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEe-cCCh-HHHHHHHHHhcCCCCeEE
Q 022463 2 QAVGSVMTNKYSEGYPGAR-YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGS-PSNFQVYTALLKPHDRIM 78 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~-~sG~-~~~~~~~~~~~~~gd~Vl 78 (297)
|+|...|.+-++.+.+..+ .+. .....++-+++|+.+++++|++.++ .|+| |+|+ .++..++.+++ +||+++
T Consensus 22 ~a~~~~~~~~~~~~~s~~~~~hr-~~~~~~~~~~~r~~la~ll~~~~~~---~v~f~t~~~T~a~n~~~~~~~-~~~~~~ 96 (361)
T 3m5u_A 22 EQAQKELCDYQGRGYSIMEISHR-TKVFEEVHFGAQEKAKKLYELNDDY---EVLFLQGGASLQFAMIPMNLA-LNGVCE 96 (361)
T ss_dssp HHHHHTSSSGGGSSSCGGGSCSS-SHHHHHHHHHHHHHHHHHHTCCTTE---EEEEESSHHHHHHHHHHHHHC-CSSCEE
T ss_pred HHHHHHHHhcccCCceeeccCCC-CHHHHHHHHHHHHHHHHHhCCCCCc---eEEEEcCcHHHHHHHHHHhcC-CCCeEE
Confidence 4566666654432211111 122 2344566668899999999996432 3777 7766 46656888888 888664
Q ss_pred EecCCCCCccccccc-ccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-c-CCCCCCcccHHHHHH
Q 022463 79 ALDLPHGGHLSHGYQ-TDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-G-ASAYARLYDYERIRK 155 (297)
Q Consensus 79 ~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~-~~~~G~~~~~~~i~~ 155 (297)
.....+.++ ++.. ....+ ..+..++++.+ ....++++. + |++ +|++|.+ + .+.+|...|.
T Consensus 97 ~i~~~~~~~--~~~~~a~~~G-----~~v~~~~~~~~-g~~~~~~~~-~--l~~-~t~lv~~~~~e~~tG~~~~~----- 159 (361)
T 3m5u_A 97 YANTGVWTK--KAIKEAQILG-----VNVKTVASSEE-SNFDHIPRV-E--FSD-NADYAYICSNNTIYGTQYQN----- 159 (361)
T ss_dssp EEECSHHHH--HHHHHHHHTT-----CCEEEEEECTT-TTSCSCCCC-C--CCT-TSSEEEEESEETTTTEECSS-----
T ss_pred EEeCCHHHH--HHHHHHHHcC-----CceEEEecccC-cCCCcCChh-h--cCC-CCCEEEEeCCCCCcceeCCc-----
Confidence 333323333 2211 12223 23445544322 111145555 3 776 8999988 4 3337987662
Q ss_pred HHHhcCCEEEEehhhhcccccccCCCCCCCCccEEEecCCccCCCCCc-eEEEEecCchhhccC-CccchhhHHHHhhhc
Q 022463 156 VCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQ-GKEVFYDYEEKINQA 233 (297)
Q Consensus 156 la~~~g~~livD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~~-g~~~~~~~~~~~~~~ 233 (297)
+++ +|+++++|++|++|..++++.. +|++++|+|||+ ||.| |+++++++...++.. ..+...++.....
T Consensus 160 i~~-~~~~~~vD~~q~~g~~~id~~~-----~d~~~~s~~K~~-gp~G~g~l~~~~~~~~~~~~~~~p~~~~~~~~~~-- 230 (361)
T 3m5u_A 160 YPK-TKTPLIVDASSDFFSRKVDFSN-----IALFYGGVQKNA-GISGLSCIFIRKDMLERSKNKQIPSMLNYLTHAE-- 230 (361)
T ss_dssp CCC-CSSCEEEECGGGTTSSCCCCTT-----EEEEEEETTTTS-SCTTCEEEEEEHHHHHHHHTCCCCGGGCHHHHHH--
T ss_pred ccc-cCCEEEEEcccccCCCCCCccc-----CCEEEEechhcc-CCCccEEEEEcHHHHhhhcCCCCCceeehHHHhh--
Confidence 444 4999999999999999998764 599999999999 7999 999999876432111 0111111221111
Q ss_pred ccCCCCCCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCc
Q 022463 234 VFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENI 287 (297)
Q Consensus 234 ~~~~~~~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~ 287 (297)
.....+||++..++++.+|++++.+..|+++++++.+++.++++++|++++.+
T Consensus 231 -~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~ 283 (361)
T 3m5u_A 231 -NQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGF 283 (361)
T ss_dssp -TTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTS
T ss_pred -cCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 12236799999999999999999877579999999999999999999998854
No 45
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.90 E-value=8.7e-23 Score=182.61 Aligned_cols=235 Identities=12% Similarity=0.102 Sum_probs=162.8
Q ss_pred HHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEec-CCCCCcccccccccccccceeeeeeEeeec
Q 022463 34 LCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALD-LPHGGHLSHGYQTDTKKISAVSIFFETMPY 111 (297)
Q Consensus 34 ~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 111 (297)
+.++++++++|. ++++ ..+++++|+ .++..++.+++++||+|++.. ..|++.+. . .+...|..+..+
T Consensus 41 ~l~~~la~~~g~-~~~~-~~v~~~~g~t~a~~~~~~~~~~~gd~vi~~~~~~~~~~~~--~-----~~~~~g~~~~~v-- 109 (366)
T 1m32_A 41 QIRQQLTALATA-SEGY-TSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGARMV--E-----MAGLMGIAHHAY-- 109 (366)
T ss_dssp HHHHHHHHHHCS-SSSE-EEEEEESCHHHHHHHHHHHSCCTTCCEEEEESSHHHHHHH--H-----HHHHHTCCEEEE--
T ss_pred HHHHHHHHHhCC-CCcC-cEEEEecChHHHHHHHHHHhcCCCCeEEEEeCCCccHHHH--H-----HHHHhCCceEEE--
Confidence 344899999994 2110 137776666 577778888889999988765 34443211 1 111223334334
Q ss_pred ccCCCCCcCCHHHHHHHhhhc-CCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCCCCCCCcc
Q 022463 112 RLNESTGYIDYDQLEKSATLF-RPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYAD 188 (297)
Q Consensus 112 ~~~~~~~~~d~~~l~~~l~~~-~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~~~~~~~D 188 (297)
+.+ .++.+|++++++++++. ++++|++ +++| +|.+.|+++|.++|++||+++|+|++|+.+..+.++... ++|
T Consensus 110 ~~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~---~~d 185 (366)
T 1m32_A 110 DCG-EVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMDIAAL---HID 185 (366)
T ss_dssp ECC-TTSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTT---TCS
T ss_pred eCC-CCCCCCHHHHHHHHhcCCCeEEEEEecccCCcceecCHHHHHHHHHHcCCEEEEECCccccCcCcccccc---Ccc
Confidence 444 45779999999999873 4788877 6555 799999999999999999999999999988776655443 689
Q ss_pred EEEecCCccCCCCCc-eEEEEecCchhhccCCccch-hhHHHHhhhc-c-cCCCCCCCchHHHHHHHHHHHHHhhhcC-h
Q 022463 189 VVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVF-YDYEEKINQA-V-FPGLQGGPHNHTITGLAVALKQVCTLIT-F 263 (297)
Q Consensus 189 ~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~~g~~~~-~~~~~~~~~~-~-~~~~~~t~~~~~~~al~~al~~~~~~~g-~ 263 (297)
++++|+||++++|.| |+++++++...++....... .+........ . .....++++...++++.++++.+.+. | +
T Consensus 186 i~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-g~~ 264 (366)
T 1m32_A 186 YLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKE-GGV 264 (366)
T ss_dssp EEEEESSSTTCCCSSEEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHH-THH
T ss_pred EEEecCcccccCCCceEEEEECHHHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHc-cCH
Confidence 999999999989988 99999986432221110000 0000101000 0 01113577888889999999998877 7 8
Q ss_pred hhHHHHhhhhHHHHHhhccCC
Q 022463 264 SHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 264 ~~~~~~~~~l~~~l~~~l~~~ 284 (297)
+++.++.+++.+++.+.|+++
T Consensus 265 ~~~~~~~~~~~~~l~~~L~~~ 285 (366)
T 1m32_A 265 AARHQRYQQNQRSLVAGMRAL 285 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHC
Confidence 899999999999999999876
No 46
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.90 E-value=2.3e-23 Score=194.00 Aligned_cols=252 Identities=12% Similarity=-0.023 Sum_probs=170.8
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHcCCCCCC------CcceEEecCChHHHHHHHHHhc-------------------CCC
Q 022463 20 RYYGGNEYIDMAESLCQKRALEAFRLDPEK------WGVNVQSLSGSPSNFQVYTALL-------------------KPH 74 (297)
Q Consensus 20 ~~~~~~~~~~~~e~~~~~~la~~~g~~~~~------~~~~v~~~sG~~~~~~~~~~~~-------------------~~g 74 (297)
..|..++...++|+.+.+++++++|.+.+. .+..+++++||.+|+.++.+.. .++
T Consensus 103 ~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~ 182 (475)
T 3k40_A 103 FTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGK 182 (475)
T ss_dssp SSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHH
T ss_pred cCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCC
Confidence 345667889999999999999999997531 0123555566667776655441 145
Q ss_pred CeEEEecCCCCCcccccccccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcC-----CcEEEE-cCCC-CCCc
Q 022463 75 DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFR-----PKLIVA-GASA-YARL 147 (297)
Q Consensus 75 d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~-----~~~v~~-~~~~-~G~~ 147 (297)
++|+++..+|.+...... +.|..++.+ +.+ +++ +|+++|+++|++.+ |.+|++ +.++ +|.+
T Consensus 183 ~~vi~s~~~H~s~~~~~~--------~~g~~~~~v--~~d-~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~ 250 (475)
T 3k40_A 183 LVGYCSDQAHSSVERAGL--------LGGVKLRSV--QSE-NHR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAF 250 (475)
T ss_dssp EEEEEETTSCHHHHHHHH--------HHTCEEEEE--CCB-TTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCB
T ss_pred eEEEECCCchHHHHHHHH--------HcCCceEEE--ECC-CCC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCc
Confidence 789999999988755432 334334444 555 567 99999999998621 555666 4444 8999
Q ss_pred ccHHHHHHHHHhcCCEEEEehhhhcccccccCCCCC---CCCccEEEecCCccCCCCCc-eEEEEecCchhh-ccCCccc
Q 022463 148 YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP---FEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI-NKQGKEV 222 (297)
Q Consensus 148 ~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~~~---~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~-~~~g~~~ 222 (297)
.|+++|.++|++||+++|+|+||+.+....+..... ...+|++++++|||+++|.| |+++++++...+ ......
T Consensus 251 ~~l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~- 329 (475)
T 3k40_A 251 DYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDPSWVVNAFNVDP- 329 (475)
T ss_dssp CCHHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESSGGGC---------
T ss_pred CCHHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCceEEEEEeCHHHHHHHhcCCc-
Confidence 999999999999999999999998876543221111 12579999999999999999 999988753221 100000
Q ss_pred hhhHHHHhh----hcc-cCCCCCCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 223 FYDYEEKIN----QAV-FPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 223 ~~~~~~~~~----~~~-~~~~~~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
.+...-. ... ......+.+ ....+++++++.+... |++++.++..++++++.+.|++.+.++
T Consensus 330 --~yl~~~~~~~~~~~~~~~~~~sr~-~~~l~l~~al~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~~g~~ 396 (475)
T 3k40_A 330 --LYLKHDMQGSAPDYRHWQIPLGRR-FRALKLWFVLRLYGVE-NLQAHIRRHCNFAKQFGDLCVADSRFE 396 (475)
T ss_dssp ---------------------CCCGG-GTHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSTTEE
T ss_pred --cccCCCcCCCCCCcccccccCCCc-ccHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 0100000 000 011122333 3456778889988877 999999999999999999999998765
No 47
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.90 E-value=2e-23 Score=187.57 Aligned_cols=219 Identities=16% Similarity=0.152 Sum_probs=158.1
Q ss_pred hhHHHHHHHHHHH-HHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceee
Q 022463 26 EYIDMAESLCQKR-ALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS 103 (297)
Q Consensus 26 ~~~~~~e~~~~~~-la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 103 (297)
+...+++ ++ +++++|.+ + +++++|+ .++..++.+++++||+|+++..+|++..... ...|
T Consensus 53 ~~~~~l~----~~~la~~~~~~--~----v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~--------~~~g 114 (371)
T 2e7j_A 53 PPIHDFI----HNQLPKFLGCD--V----ARVTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVAA--------ERAG 114 (371)
T ss_dssp CCHHHHH----HTHHHHHTTSS--E----EEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHH--------HHTT
T ss_pred HHHHHHH----HHHHHHHcCCC--E----EEEeCChHHHHHHHHHHHhCCCCEEEEccCcchHHHHHH--------HHcC
Confidence 4455555 88 99999987 3 8888886 6777788888999999999998888775542 2233
Q ss_pred eeeEeeecccCCCCCcCCHHHHHHHhhh----cCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccc
Q 022463 104 IFFETMPYRLNESTGYIDYDQLEKSATL----FRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAA 177 (297)
Q Consensus 104 ~~~~~v~~~~~~~~~~~d~~~l~~~l~~----~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~ 177 (297)
..+..++.+.+ .++.+|++++++.+++ .++++|++ +++| +|.+.|+++|.++|++||+++|+|++|+.+..+.
T Consensus 115 ~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~ 193 (371)
T 2e7j_A 115 LNIALVPKTDY-PDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPV 193 (371)
T ss_dssp CEEEEECCCCT-TTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBCC
T ss_pred CeEEEeecccC-CCCCcCHHHHHHHHHhhcccCCeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECccccCCCCC
Confidence 33444432155 4578999999999983 27888888 6766 7999999999999999999999999999887654
Q ss_pred cCCCCCCCCccEEEecCCccCCCCCc-eEEEEecCchhhccCCccchhhHHHHhhhcccC-C-----CCCCCchHHHHHH
Q 022463 178 GVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFP-G-----LQGGPHNHTITGL 250 (297)
Q Consensus 178 ~~~~~~~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~-----~~~t~~~~~~~al 250 (297)
+.... ++|++++|+||++++|.+ |+++++++...+. +...... . ..++++...++++
T Consensus 194 ~~~~~---~~di~~~s~sK~~~~~~~~G~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~a~ 257 (371)
T 2e7j_A 194 SLKEI---GADFIVGSGHKSMAASGPIGVMGMKEEWAEIV-------------LRRSEKYKNKEVELLGCTARGATIITL 257 (371)
T ss_dssp CHHHH---TCSEEEEEHHHHSSCCSSCEEEEECTTTTTTT-------------TCBCSSCTTSBGGGTTCCCCSHHHHHH
T ss_pred Chhhc---CCCEEEecCCcCCCCCCCcEEEEEechhhhhh-------------ccccccCcccccccccCCcCHHHHHHH
Confidence 33222 579999999999988777 9999988642110 1111000 0 1456677778888
Q ss_pred HHHHHHHhhhcChhhHHHHh--hhhHHHHHhhccCC
Q 022463 251 AVALKQVCTLITFSHIHVFS--LHVYPAFVSNQNNS 284 (297)
Q Consensus 251 ~~al~~~~~~~g~~~~~~~~--~~l~~~l~~~l~~~ 284 (297)
.++++.+.+ ++.++. +++.+++.+.|++.
T Consensus 258 ~~~l~~~~~-----~~~~~~~~~~~~~~l~~~L~~~ 288 (371)
T 2e7j_A 258 MASFPHVRE-----RIKRWDEEVEKARRFAAEMEKL 288 (371)
T ss_dssp HHHHHHHHH-----HGGGHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHc
Confidence 888887754 344555 66677777777665
No 48
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.90 E-value=6.3e-23 Score=191.42 Aligned_cols=254 Identities=12% Similarity=0.031 Sum_probs=173.6
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHcCCCCCCC-------cceEEecCChHHHHHHHHHhc-------------------CC
Q 022463 20 RYYGGNEYIDMAESLCQKRALEAFRLDPEKW-------GVNVQSLSGSPSNFQVYTALL-------------------KP 73 (297)
Q Consensus 20 ~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~-------~~~v~~~sG~~~~~~~~~~~~-------------------~~ 73 (297)
..|..++...++|+.+.+++++++|.+.+.+ +..+++++||.+|+.++.+.. .+
T Consensus 108 ~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~ 187 (481)
T 4e1o_A 108 FTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNA 187 (481)
T ss_dssp SSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHT
T ss_pred CCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccC
Confidence 3456678899999999999999999875310 123555556677776665442 25
Q ss_pred CCeEEEecCCCCCcccccccccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcC-----CcEEEE-cCCC-CCC
Q 022463 74 HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFR-----PKLIVA-GASA-YAR 146 (297)
Q Consensus 74 gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~-----~~~v~~-~~~~-~G~ 146 (297)
+++|+++..+|.+...... +.|..++.+ +.+ +++.+|+++|+++|++.+ |.+|++ +.++ +|.
T Consensus 188 ~~~v~~s~~~H~s~~~~~~--------~~g~~~~~v--~~~-~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~ 256 (481)
T 4e1o_A 188 RLVAYASDQAHSSVEKAGL--------ISLVKMKFL--PVD-DNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCA 256 (481)
T ss_dssp TEEEEEETTSCHHHHHHHH--------HHTCEEEEE--CCC-TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCC
T ss_pred CeEEEEcCcchHHHHHHHH--------hCCCceEEE--EcC-CCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcC
Confidence 7899999999988755432 334334444 455 678999999999998632 555666 4444 899
Q ss_pred cccHHHHHHHHHhcCCEEEEehhhhcccccccCCCCC---CCCccEEEecCCccCCCCCc-eEEEEecCchhh-ccCCcc
Q 022463 147 LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP---FEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI-NKQGKE 221 (297)
Q Consensus 147 ~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~~~---~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~-~~~g~~ 221 (297)
+.|+++|.++|++||+++|+|+||+.+....+..... ...+|++++++||||++|.| |+++++++.... ......
T Consensus 257 id~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~ 336 (481)
T 4e1o_A 257 FDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNP 336 (481)
T ss_dssp BCCHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESBHHHHHTTTCCCC
T ss_pred cCCHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCceEEEEEeCHHHHHHHhcCCc
Confidence 9999999999999999999999998876543221111 12469999999999999999 998888753211 100000
Q ss_pred chhhHHHH-----hhhcccCCCCCCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCccc
Q 022463 222 VFYDYEEK-----INQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIEE 289 (297)
Q Consensus 222 ~~~~~~~~-----~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~ 289 (297)
.+... ..........++.. ....+++++++.+... |++++.++..++++++.+.|++.+.++-
T Consensus 337 ---~yl~~~~~~~~~~~~~~~~~~~r~-~~~l~~~~al~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 404 (481)
T 4e1o_A 337 ---IYLRHANSGVATDFMHWQIPLSRR-FRSVKLWFVIRSFGVK-NLQAHVRHGTEMAKYFESLVRNDPSFEI 404 (481)
T ss_dssp ---GGGCCTTTTTSCCGGGGSSSSCCC-CTHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTCTTEEC
T ss_pred ---hhccCcccCCCCCcccccccCCCC-ccHHHHHHHHHHhHHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 00000 00000001122322 2345778888888777 9999999999999999999999987663
No 49
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.90 E-value=8e-23 Score=182.72 Aligned_cols=240 Identities=10% Similarity=-0.018 Sum_probs=168.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeee
Q 022463 27 YIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 105 (297)
Q Consensus 27 ~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 105 (297)
...++.+++++++++++|.+..+ .+++++|+ .++..++.+++++ .+++....|.+. .+.. .+...|..
T Consensus 40 ~~~~~~~~~~~~la~~~g~~~~~---~v~~~~g~t~al~~~~~~l~~~--~~i~~~~~~~~~--~~~~----~~~~~g~~ 108 (362)
T 3ffr_A 40 KFEEVYKTASDNLKTLLELPSNY---EVLFLASATEIWERIIQNCVEK--KSFHCVNGSFSK--RFYE----FAGELGRE 108 (362)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTE---EEEEESCHHHHHHHHHHHHCSS--EEEEEECSHHHH--HHHH----HHHHTTCE
T ss_pred HHHHHHHHHHHHHHHHhCCCCCc---EEEEeCCchHHHHHHHHhccCC--cEEEEcCcHHHH--HHHH----HHHHhCCC
Confidence 34466667789999999985322 37777766 5777788888888 555554444332 1110 11122333
Q ss_pred eEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhc-CCEEEEehhhhcccccccCCCC
Q 022463 106 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQ-KAIMLADMAHISGLVAAGVIPS 182 (297)
Q Consensus 106 ~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~-g~~livD~a~~~g~~~~~~~~~ 182 (297)
+..+ +.+ .++.+|+++++ +++ +|++|++ +++| +|.+.|+++|.++|++| |+++|+|++|+.+..+.+..
T Consensus 109 ~~~v--~~~-~~~~~d~~~l~--~~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~~~~~-- 180 (362)
T 3ffr_A 109 AYKE--EAA-FGKGFYPADIT--VPA-DAEIICLTHNETSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPKFDWT-- 180 (362)
T ss_dssp EEEE--ECC-TTCCCCGGGCC--CCT-TCCEEEEESEETTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSCCCTT--
T ss_pred eEEE--ecC-CCCCCCHHHHh--ccC-CccEEEEEcCCCCcceeCCHHHHHHHHHhCCCCEEEEecccccCCcccChh--
Confidence 4444 444 45789999998 665 8999999 6766 89999999999999999 99999999999887665432
Q ss_pred CCCCccEEEecCCccCCCCCc-eEEEEecCchh--h-ccCCcc--ch-hhHHHHhhhcccCCCCCCCchHHHHHHHHHHH
Q 022463 183 PFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKE--I-NKQGKE--VF-YDYEEKINQAVFPGLQGGPHNHTITGLAVALK 255 (297)
Q Consensus 183 ~~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~--~-~~~g~~--~~-~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~ 255 (297)
.+|++++|+||++++|.| |+++.+++... + ...|+. .. .++.............++++....+++.++++
T Consensus 181 ---~~d~~~~s~~K~~~~~~G~g~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 257 (362)
T 3ffr_A 181 ---KIDSVFFSVQKCFGLPAGLGVWILNDRVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTG 257 (362)
T ss_dssp ---SCSEEEEETTSTTCCCSCCEEEEEEHHHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHH
T ss_pred ---HCcEEEEecccccCCCCceEEEEECHHHHHHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHH
Confidence 379999999999987888 99888886522 1 111111 00 01111111111122266888899999999999
Q ss_pred HHhhhcChhhHHHHhhhhHHHHHhhccCCCCccc
Q 022463 256 QVCTLITFSHIHVFSLHVYPAFVSNQNNSENIEE 289 (297)
Q Consensus 256 ~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~ 289 (297)
.+.+. |++++.++.+++++++.+.|++++.++-
T Consensus 258 ~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 290 (362)
T 3ffr_A 258 DMLQI-SADGIRKQTEEKAALINTYIESSKVFSF 290 (362)
T ss_dssp HHHHH-CHHHHHHHHHHHHHHHHHHHHHCSSEEE
T ss_pred HHHHc-cHHHHHHHHHHHHHHHHHHHHHccCcee
Confidence 88888 8999999999999999999999876553
No 50
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.89 E-value=1.6e-22 Score=185.28 Aligned_cols=171 Identities=13% Similarity=0.087 Sum_probs=126.1
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEE---ecCChHHHHHHHHHhcCCCCeEEEec-CCCCCcccccc-cc-c-ccc
Q 022463 26 EYIDMAESLCQKRALEAFRLDPEKWGVNVQ---SLSGSPSNFQVYTALLKPHDRIMALD-LPHGGHLSHGY-QT-D-TKK 98 (297)
Q Consensus 26 ~~~~~~e~~~~~~la~~~g~~~~~~~~~v~---~~sG~~~~~~~~~~~~~~gd~Vl~~~-~~~~~~~~~~~-~~-~-~~~ 98 (297)
...+.+| +.+++++|++.. ++ ++||++++..++.++++|||+|+++. ..|++.....- .. . ...
T Consensus 73 ~~~~~Le----~~lA~l~g~e~a-----lv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~ 143 (427)
T 3i16_A 73 IGRDSLD----AVYARVFNTESA-----LVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMGS 143 (427)
T ss_dssp HHHHHHH----HHHHHHHTCSEE-----EEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSSCC
T ss_pred HHHHHHH----HHHHHHhCCcce-----EEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchHHH
Confidence 3466677 889999999763 66 78888888888999999999999987 66665542110 00 0 001
Q ss_pred cceeeeeeEeeecccCCCCCcCCHHHHHHHhhh-cCCcEEEE-c----CCC-CCCcccHHHHHHHHHh--cCCEEEEehh
Q 022463 99 ISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-FRPKLIVA-G----ASA-YARLYDYERIRKVCNK--QKAIMLADMA 169 (297)
Q Consensus 99 ~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~-~~~~~v~~-~----~~~-~G~~~~~~~i~~la~~--~g~~livD~a 169 (297)
....|. +.+.++.+ +++.+|++++++++++ .+|++|++ + ++| +|.+.|+++|.++|++ +|+++++|++
T Consensus 144 l~~~G~--~~~~v~~~-~~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a 220 (427)
T 3i16_A 144 LKEFGI--NYKQVDLK-EDGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNC 220 (427)
T ss_dssp TGGGTC--EEEECCCC-TTSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred HHHcCC--EEEEecCc-cCCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 111232 33444555 4578999999999982 28999999 5 566 6899999999999999 9999999999
Q ss_pred hhcccccccCCCCCCCCccEEEecCCccCCC---CCceEEEEecC
Q 022463 170 HISGLVAAGVIPSPFEYADVVTTTTHKSLRG---PRGAMIFFRKG 211 (297)
Q Consensus 170 ~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~g---p~gG~i~~~~~ 211 (297)
|+.+......... ++|++++|+||+++| +.||+++++++
T Consensus 221 ~~~~~~~~~p~~~---gaDiv~~S~sK~lgg~g~~~gG~i~~~~~ 262 (427)
T 3i16_A 221 YGEFMDTKEPTDV---GADLIAGSLIKNIGGGIAPTGGYLAGTKD 262 (427)
T ss_dssp TTTTSSSSCGGGG---TCSEEEEETTSGGGTTTCCSCEEEEECHH
T ss_pred CccccccCCcccc---CCeEEEecCcccCCCCCCceEEEEEECHH
Confidence 9876533221122 799999999999988 78899999873
No 51
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.89 E-value=1.7e-22 Score=183.16 Aligned_cols=219 Identities=18% Similarity=0.136 Sum_probs=161.4
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeee
Q 022463 25 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 104 (297)
Q Consensus 25 ~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 104 (297)
.+...+++ ++++++++.+. .+++++|++++..++.+++++||.|+++...|++.... +...|.
T Consensus 87 ~~~~~~l~----~~la~~~~~~~-----~i~~~sGt~a~~~~l~~~~~~gd~v~~~~~~~~~~~~~--------~~~~g~ 149 (399)
T 3tqx_A 87 QTIHKELE----KDISEFLGTDD-----TILYSSCFDANGGLFETLLGPEDAIISDELNHASIIDG--------IRLCKA 149 (399)
T ss_dssp BHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHH--------HHSCCS
T ss_pred chHHHHHH----HHHHHHHCCCc-----EEEECchHHHHHHHHHHhcCCCCEEEECCcccHHHHHH--------HHHcCC
Confidence 45556666 88999999863 48999999888778888999999999999888776442 233343
Q ss_pred eeEeeecccCCCCCcCCHHHHHHHhhhc-----CCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccc
Q 022463 105 FFETMPYRLNESTGYIDYDQLEKSATLF-----RPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAA 177 (297)
Q Consensus 105 ~~~~v~~~~~~~~~~~d~~~l~~~l~~~-----~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~ 177 (297)
.+..+ +. .|++++++.+++. ++++|++ +++| +|.+.|+++|.++|++||+++|+|++|+.|....
T Consensus 150 ~~~~~--~~------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~ 221 (399)
T 3tqx_A 150 QRYRY--KN------NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIGE 221 (399)
T ss_dssp EEEEE--CT------TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSST
T ss_pred ceeEe--CC------CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCC
Confidence 33333 32 4678899988763 6888888 6666 7999999999999999999999999998765432
Q ss_pred cCCC----CC-CCCccEEEecCCccCCCCCceEEEEecCchhhccCCccchhhHHHHhhhcccC-CCCCCCchHHHHHHH
Q 022463 178 GVIP----SP-FEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFP-GLQGGPHNHTITGLA 251 (297)
Q Consensus 178 ~~~~----~~-~~~~D~~~~s~~K~l~gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~t~~~~~~~al~ 251 (297)
.... .. ..+.|+++.|+||+++|++||+++.+++ +.+.+.....+ ...++++...++++.
T Consensus 222 ~~~~~~~~~~~~~~~di~~~s~sK~~~g~~gG~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (399)
T 3tqx_A 222 NGRGTPEYCGVADRVDILTGTLGKALGGASGGYTSGHKE--------------IIEWLRNRSRPYLFSNTVAPVIVATSL 287 (399)
T ss_dssp TSCCHHHHHTCTTCCSEEEEESSSSSCSSCCEEEEECHH--------------HHHHHHHHCHHHHSSCCCCHHHHHHHH
T ss_pred CCCchHHhhCCCCCCcEEEecchHhcccCceEEEEcCHH--------------HHHHHHHhCcceeccCCCcHHHHHHHH
Confidence 2110 00 1156999999999998889999998884 33333322111 114466778888888
Q ss_pred HHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 252 VALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 252 ~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
++++.+. . +.++++++.+++.+++.+.|++.
T Consensus 288 ~~l~~~~-~-~~~~~~~~~~~~~~~l~~~L~~~ 318 (399)
T 3tqx_A 288 KVLELLK-T-EGPQLRKQLQENSRYFRAGMEKL 318 (399)
T ss_dssp HHHHHHH-H-THHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHh-h-ccHHHHHHHHHHHHHHHHHHHHc
Confidence 8888774 3 67889999999999999988876
No 52
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.89 E-value=1.6e-22 Score=184.54 Aligned_cols=170 Identities=16% Similarity=0.163 Sum_probs=124.7
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEE---ecCChHHHHHHHHHhcCCCCeEEEec-CCCCCcccccccc--ccccc
Q 022463 26 EYIDMAESLCQKRALEAFRLDPEKWGVNVQ---SLSGSPSNFQVYTALLKPHDRIMALD-LPHGGHLSHGYQT--DTKKI 99 (297)
Q Consensus 26 ~~~~~~e~~~~~~la~~~g~~~~~~~~~v~---~~sG~~~~~~~~~~~~~~gd~Vl~~~-~~~~~~~~~~~~~--~~~~~ 99 (297)
...+.+| +.+++++|++.. ++ ++||+.++..++.++++|||+|+++. ..|.+........ .....
T Consensus 59 ~~~~~Le----~~lA~l~g~e~a-----lv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l 129 (409)
T 3jzl_A 59 EGRDTLE----RVYATVFKTEAA-----LVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGIRKQGQGSL 129 (409)
T ss_dssp HHHHHHH----HHHHHHHTCSEE-----EEETTSCSHHHHHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSSSSSSSCT
T ss_pred hHHHHHH----HHHHHHhCCCcE-----EEECCCccHHHHHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhcccchhhHH
Confidence 3456666 889999999763 55 67888888888899999999999987 6666554211000 00011
Q ss_pred ceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-c----CCC-CCCcccHHHHHHHHHh--cCCEEEEehhhh
Q 022463 100 SAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-G----ASA-YARLYDYERIRKVCNK--QKAIMLADMAHI 171 (297)
Q Consensus 100 ~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~----~~~-~G~~~~~~~i~~la~~--~g~~livD~a~~ 171 (297)
...|..+ +.++.+ .++.+|++++++++++ +|++|++ + ++| +|.+.|+++|.++|++ +|+++++|++++
T Consensus 130 ~~~G~~~--~~v~~~-~~g~~d~e~l~~ai~~-~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~ 205 (409)
T 3jzl_A 130 KDFHIGY--SSVPLL-ENGDVDFPRIAKKMTP-KTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYG 205 (409)
T ss_dssp GGGTCEE--EECCCC-TTSCCCHHHHHHHCCT-TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTC
T ss_pred HHcCCEE--EEeCCC-CCCCcCHHHHHHhccC-CCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCcc
Confidence 1223223 444555 4678999999999987 8999999 6 667 7899999999999999 999999999987
Q ss_pred cccccccCCCCCCCCccEEEecCCccCCC---CCceEEEEecC
Q 022463 172 SGLVAAGVIPSPFEYADVVTTTTHKSLRG---PRGAMIFFRKG 211 (297)
Q Consensus 172 ~g~~~~~~~~~~~~~~D~~~~s~~K~l~g---p~gG~i~~~~~ 211 (297)
.+......... ++|++++|++|+++| +.||+++.+++
T Consensus 206 ~~~~~~~p~~~---g~Div~~S~sK~lgg~~~~~GG~v~~~~~ 245 (409)
T 3jzl_A 206 EFVEYQEPPEV---GADIIAGSLIKNPGGGLAKTGGYIAGKEA 245 (409)
T ss_dssp TTTSSCCSGGG---TCSEEEEETTSGGGTTTCSSCEEEEECHH
T ss_pred cccccCCcccc---CCeEEEECccccCCccCCceEEEEEeCHH
Confidence 66532221222 799999999999977 45799999873
No 53
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.89 E-value=2.4e-23 Score=191.20 Aligned_cols=231 Identities=13% Similarity=0.063 Sum_probs=156.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhc--------CCCCeEEEecC-------------CCC
Q 022463 28 IDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALL--------KPHDRIMALDL-------------PHG 85 (297)
Q Consensus 28 ~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~--------~~gd~Vl~~~~-------------~~~ 85 (297)
..+..+..++++++++|+++++ +++++|+ .++..++.+++ ++||+|+++.+ +|+
T Consensus 59 ~~~~~~~l~~~la~~~g~~~~~----v~~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~ 134 (432)
T 3a9z_A 59 AKDIINTARASLAKMIGGKPQD----IIFTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHD 134 (432)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGG----EEEESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCH
T ss_pred HHHHHHHHHHHHHHHcCCCcCe----EEEeCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcch
Confidence 4455566779999999997654 8888886 57766777765 58876555544 444
Q ss_pred CcccccccccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcC--
Q 022463 86 GHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQK-- 161 (297)
Q Consensus 86 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g-- 161 (297)
+...++..+. ...|..+..+ +.+++++.+|+++|++.+++ +|++|++ +++| +|.+.|+++|.++|+++|
T Consensus 135 s~~~~~~~~~----~~~g~~v~~v--~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~ 207 (432)
T 3a9z_A 135 SIRLPLEHLV----EDQVAEVTFV--PVSKVNGQVEVEDILAAVRP-TTCLVTIMLANNETGVIMPISEISRRIKALNQI 207 (432)
T ss_dssp HHHHHHHHHH----HTTSCEEEEE--CCCTTTSSCCHHHHHHTCCT-TEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHH----HhcCcEEEEE--ecCcccCCcCHHHHHHhccC-CceEEEEECcccCcccccCHHHHHHHHHhcCcc
Confidence 3332222111 1123334334 45533678999999999987 8898888 6666 799999999999999999
Q ss_pred --------CEEEEehhhhcccccccCCCCCCCCccEEEecCCccCCCCCceEEEEecCch-hh---ccCCccchhhHHHH
Q 022463 162 --------AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVK-EI---NKQGKEVFYDYEEK 229 (297)
Q Consensus 162 --------~~livD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~gG~i~~~~~~~-~~---~~~g~~~~~~~~~~ 229 (297)
+++|+|++|+.|..+.++... ++|++++|+||++ ||+.|+++++++.. .+ ...|+..
T Consensus 208 ~~~~~~~~~~livDea~~~~~~~~~~~~~---~~d~~~~s~~K~~-g~~~G~~~~~~~~~~~~~~~~~~~~~~------- 276 (432)
T 3a9z_A 208 RAASGLPRVLVHTDAAQALGKRRVDVEDL---GVDFLTIVGHKFY-GPRIGALYVRGVGKLTPLYPMLFGGGQ------- 276 (432)
T ss_dssp HHHHTCCCCEEEEECTTTTTTSCCCHHHH---CCSEEEEEGGGTT-CCSCEEEEETTBTTTBCCCCSCCSSCG-------
T ss_pred cccccCCceEEEEEchhhhCCcccChhhc---CCCEEEEehhHhc-CCcceEEEEccccccCCcCceeecCCc-------
Confidence 999999999887654433222 6899999999986 77789999987541 11 1111110
Q ss_pred hhhcccCCCCCCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCC
Q 022463 230 INQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSEN 286 (297)
Q Consensus 230 ~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~ 286 (297)
.. ....++++...++++.++++.+. . +++++.++.+++.+++.+.|++++.
T Consensus 277 -~~---~~~~~~~~~~~~~a~~aal~~~~-~-~~~~~~~~~~~~~~~l~~~L~~~~g 327 (432)
T 3a9z_A 277 -ER---NFRPGTENTPMIAGLGKAADLVS-E-NCETYEAHMRDIRDYLEERLEAEFG 327 (432)
T ss_dssp -GG---GTSCSCCCHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred -cc---cccCCCcCHHHHHHHHHHHHHHH-h-hHHHHHHHHHHHHHHHHHHHHhccC
Confidence 00 11146778888888888998765 3 6888999999999999999887543
No 54
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.88 E-value=2.6e-22 Score=183.84 Aligned_cols=169 Identities=15% Similarity=0.150 Sum_probs=124.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCCcceEE---ecCChHHHHHHHHHhcCCCCeEEEec-CCCCCcccccc--c-cccccc
Q 022463 27 YIDMAESLCQKRALEAFRLDPEKWGVNVQ---SLSGSPSNFQVYTALLKPHDRIMALD-LPHGGHLSHGY--Q-TDTKKI 99 (297)
Q Consensus 27 ~~~~~e~~~~~~la~~~g~~~~~~~~~v~---~~sG~~~~~~~~~~~~~~gd~Vl~~~-~~~~~~~~~~~--~-~~~~~~ 99 (297)
..+.+| +.+++++|++.. ++ ++||++++..++.++++|||+|++++ ..|++...... . ......
T Consensus 75 g~~~Le----~~lA~l~g~e~a-----lv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l 145 (427)
T 3hvy_A 75 GRDSLD----RVYANIFNTESA-----FVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDSKKVGSL 145 (427)
T ss_dssp HHHHHH----HHHHHHHTCSEE-----EEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTTCCSCCT
T ss_pred hHHHHH----HHHHHHhCCCce-----EEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccchhhhHH
Confidence 456666 899999999863 56 68888888888999999999999987 66665431110 0 000011
Q ss_pred ceeeeeeEeeecccCCCCCcCCHHHHHHHhhh-cCCcEEEE-c----CCC-CCCcccHHHHHHHHHh--cCCEEEEehhh
Q 022463 100 SAVSIFFETMPYRLNESTGYIDYDQLEKSATL-FRPKLIVA-G----ASA-YARLYDYERIRKVCNK--QKAIMLADMAH 170 (297)
Q Consensus 100 ~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~-~~~~~v~~-~----~~~-~G~~~~~~~i~~la~~--~g~~livD~a~ 170 (297)
...|..+..+ +. +++.+|++++++++++ .+|++|++ + ++| +|.+.|+++|.++|++ +|+++++|++|
T Consensus 146 ~~~G~~~~~v--~~--~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~ 221 (427)
T 3hvy_A 146 REYGVKYKMV--DL--KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCY 221 (427)
T ss_dssp GGGTCEEEEC--CC--BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTT
T ss_pred HHcCCEEEEe--cC--CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCc
Confidence 1123223333 44 3578999999999983 38999999 5 566 6888999999999999 89999999999
Q ss_pred hcccccccCCCCCCCCccEEEecCCccCCC---CCceEEEEecC
Q 022463 171 ISGLVAAGVIPSPFEYADVVTTTTHKSLRG---PRGAMIFFRKG 211 (297)
Q Consensus 171 ~~g~~~~~~~~~~~~~~D~~~~s~~K~l~g---p~gG~i~~~~~ 211 (297)
+.+......... ++|++++|+||+++| |.||+++++++
T Consensus 222 ~~~~~~~~p~~~---gaDiv~~S~sK~lgg~g~~~GG~i~~~~~ 262 (427)
T 3hvy_A 222 GEFVEEKEPTDV---GADIIAGSLIKNIGGGIATTGGYIAGKEE 262 (427)
T ss_dssp CTTTSSSCGGGG---TCSEEEEETTSGGGTTTCCSCEEEEECHH
T ss_pred cccccCCCCccc---CCeEEEECCcccccccccceEEEEEECHH
Confidence 876632221122 789999999999988 78899999873
No 55
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.88 E-value=1.3e-22 Score=188.12 Aligned_cols=226 Identities=12% Similarity=0.073 Sum_probs=158.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChH--HHHHHHHHhcC--CCCeEEEecCCCCCccccccccccccccee
Q 022463 27 YIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP--SNFQVYTALLK--PHDRIMALDLPHGGHLSHGYQTDTKKISAV 102 (297)
Q Consensus 27 ~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~--~~~~~~~~~~~--~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~ 102 (297)
...++++.+++++++++|++++ +++++|++ +|+.++.++.. ++++|+++..+|++..... ...
T Consensus 130 ~~~~~~~~~~~~la~~~g~~~~-----~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~--------~~~ 196 (456)
T 2z67_A 130 IMYALTNKILESFFKQLGLNVH-----AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAV--------SFV 196 (456)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCE-----EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHH--------HHT
T ss_pred HHHHHHHHHHHHHHHHcCCCCC-----EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHH--------HHc
Confidence 3677888999999999999863 55655553 55545555433 7788998888888854322 223
Q ss_pred eeeeEeeecc-cCCCCCcCCHHHHHHHh-hh---cCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhh---c
Q 022463 103 SIFFETMPYR-LNESTGYIDYDQLEKSA-TL---FRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHI---S 172 (297)
Q Consensus 103 g~~~~~v~~~-~~~~~~~~d~~~l~~~l-~~---~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~---~ 172 (297)
|.++..+++. .+ +++.+|+++|++++ ++ .++.+|++ +++| +|.+.|+++|.++|+++|+++++|+||+ .
T Consensus 197 G~~~~~v~~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~ 275 (456)
T 2z67_A 197 GMNMRLVETVLDG-DRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNN 275 (456)
T ss_dssp TCEEEEECCEEET-TEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCH
T ss_pred CCCceEEEEeccC-CCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHH
Confidence 4334444321 13 56899999999999 42 26666666 4545 7999999999999999999999997765 3
Q ss_pred ccccccCCCCCCCCccEEEecCCccCCCCCc-eEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHH
Q 022463 173 GLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLA 251 (297)
Q Consensus 173 g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~ 251 (297)
|..+.+....+. ++|++++|+|||+++|.| |+++++++ ++.+.+.+.+. ++.+.....++.
T Consensus 276 g~~~~~~~~~~~-~~D~~~~s~hK~~~~p~g~G~l~~~~~-------------~~~~~l~~~~~----g~~~~~~~~~~~ 337 (456)
T 2z67_A 276 YYLEKLKKAFKY-RVDAVVSSSDKNLLTPIGGGLVYSTDA-------------EFIKEISLSYP----GRASATPVVNTL 337 (456)
T ss_dssp HHHHHHHHHHTS-CCSEEEEEHHHHHCCCSSCEEEEESCH-------------HHHHHHHTTSC----SCBCSHHHHHHH
T ss_pred HhhHHHHHhhCC-CCCEEEEcCCCCcCCCCCeEEEEEcCH-------------HHHhhcCcCCC----CCCCCCHHHHHH
Confidence 333332211111 689999999999989988 99999653 33444433222 222223356677
Q ss_pred HHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCC
Q 022463 252 VALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSE 285 (297)
Q Consensus 252 ~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~ 285 (297)
+++..+... +++++.++..++++++.+.|++++
T Consensus 338 aal~~l~~~-~~~~~~~~~~~~~~~l~~~L~~~~ 370 (456)
T 2z67_A 338 VSLLSMGSK-NYLELVKNQKNSKKLLDELLNDLS 370 (456)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcc
Confidence 888888777 999999999999999999998874
No 56
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.88 E-value=1.8e-22 Score=181.85 Aligned_cols=224 Identities=13% Similarity=0.074 Sum_probs=156.5
Q ss_pred CCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHh-cCCCCeEEEecCCCCCcccccccccccccce
Q 022463 23 GGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISA 101 (297)
Q Consensus 23 ~~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~ 101 (297)
...+...++| +.+++++|.+. .+++++|++++..++.++ +++||+|+++..+|++...... .
T Consensus 33 ~~~~~~~~l~----~~la~~~~~~~-----~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~~~--------~ 95 (373)
T 3frk_A 33 ILGDEDKKFE----QEFADYCNVNY-----CIGCGNGLDALHLILKGYDIGFGDEVIVPSNTFIATALAVS--------Y 95 (373)
T ss_dssp SSSHHHHHHH----HHHHHHHTSSE-----EEEESCHHHHHHHHHHHTTCCTTCEEEEETTSCTHHHHHHH--------H
T ss_pred cCCchHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHHH--------H
Confidence 3456677777 88999999873 366677777888788888 9999999999999988765432 2
Q ss_pred eeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCC
Q 022463 102 VSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP 181 (297)
Q Consensus 102 ~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~ 181 (297)
.|..+ +.++.+++++.+|++++++.+++ ++++|+++ +.+|...|+++|.++|+++|+++|+|++|+.|.. .+...
T Consensus 96 ~g~~~--~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~-n~~G~~~~l~~i~~l~~~~~~~li~D~a~~~g~~-~~~~~ 170 (373)
T 3frk_A 96 TGAKP--IFVEPDIRTYNIDPSLIESAITE-KTKAIIAV-HLYGQPADMDEIKRIAKKYNLKLIEDAAQAHGSL-YKGMK 170 (373)
T ss_dssp HSCEE--EEECEETTTTEECGGGTGGGCCT-TEEEEEEE-CCTTCCCCHHHHHHHHHHHTCEEEEECTTCTTCE-ETTEE
T ss_pred cCCEE--EEEeccccccCcCHHHHHHhcCC-CCeEEEEE-CCCcCcccHHHHHHHHHHcCCEEEEECCcccCCE-ECCEe
Confidence 33333 44456656788999999999987 88888852 1389999999999999999999999999998776 33222
Q ss_pred CCCCCccEEEec--CCccCCC-CCceEEEEecCchhhccCCccchhhHHHHhhhcc--------cCCCCCCCchHHHHHH
Q 022463 182 SPFEYADVVTTT--THKSLRG-PRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV--------FPGLQGGPHNHTITGL 250 (297)
Q Consensus 182 ~~~~~~D~~~~s--~~K~l~g-p~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~--------~~~~~~t~~~~~~~al 250 (297)
. ....|++++| .+|++++ +.||+++++++. +.+.+.... .....+. + ..+.++
T Consensus 171 ~-~~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~~-------------~~~~~~~~~~~g~~~~~~~~~~g~-~-~~~~~~ 234 (373)
T 3frk_A 171 V-GSLGDAAGFSFYPAKNLGSLGDGGAVVTNDKD-------------LAEKIKALSNYGSEKKYHHIYKGF-N-SRLDEL 234 (373)
T ss_dssp T-TSSSSEEEEECCTTSSSCCSSSCEEEEESCHH-------------HHHHHHHHHBTTCSBTTBCCSCCC-B-CCCCHH
T ss_pred c-cccccEEEEeCcCCCccCccceeEEEEeCCHH-------------HHHHHHHHHhcCcccCCccccccc-c-CCCCHH
Confidence 2 0137898888 4599977 566888887642 111111100 0111111 1 112233
Q ss_pred HHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCC
Q 022463 251 AVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSE 285 (297)
Q Consensus 251 ~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~ 285 (297)
.+++...... +++.+.++.+++.+++.+.|++++
T Consensus 235 ~aa~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~ 268 (373)
T 3frk_A 235 QAGFLRVKLK-YLDKWNEERRKIAQKYIAGINNPN 268 (373)
T ss_dssp HHHHHHHHHH-THHHHHHHHHHHHHHHHHHCCCTT
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhccCc
Confidence 4444444444 788899999999999999999887
No 57
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.88 E-value=7.3e-22 Score=178.75 Aligned_cols=226 Identities=12% Similarity=0.156 Sum_probs=154.4
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHh-cCCCCeEEEecCCCCCccccccccccccccee
Q 022463 24 GNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAV 102 (297)
Q Consensus 24 ~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~ 102 (297)
..+...+++ +.+++++|.+. .++++||+.++..++.++ +++||+|+++..+|++...... ..
T Consensus 36 ~~~~~~~l~----~~la~~~~~~~-----~i~~~sGt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~~~--------~~ 98 (388)
T 1b9h_A 36 GGDEVNSFE----REFAAHHGAAH-----ALAVTNGTHALELALQVMGVGPGTEVIVPAFTFISSSQAAQ--------RL 98 (388)
T ss_dssp TCSHHHHHH----HHHHHHTTCSE-----EEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHH--------HT
T ss_pred CCHHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHcCCCCcCEEEECCCccHHHHHHHH--------Hc
Confidence 345667777 88999999873 499999987887788888 8999999999999888754332 22
Q ss_pred eeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEEcCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCC
Q 022463 103 SIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP 181 (297)
Q Consensus 103 g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~ 181 (297)
|..+ ++++++++++.+|++++++.+++ ++++|+ ++| +|.+.|+++|.++|++||+++|+|++|+.|..+.+...
T Consensus 99 g~~~--~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~--~~n~tG~~~~l~~i~~la~~~~~~li~D~a~~~g~~~~~~~~ 173 (388)
T 1b9h_A 99 GAVT--VPVDVDAATYNLDPEAVAAAVTP-RTKVIM--PVHMAGLMADMDALAKISADTGVPLLQDAAHAHGARWQGKRV 173 (388)
T ss_dssp TCEE--EEECBCTTTCCBCHHHHHHHCCT-TEEEEC--CBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEEG
T ss_pred CCEE--EEEecCCCcCCCCHHHHHHhcCc-CceEEE--EeCCccCcCCHHHHHHHHHHcCCEEEEecchhcCCccCCeec
Confidence 3223 44456645688999999999986 788777 445 79999999999999999999999999998775522111
Q ss_pred CCCCCccEEEecCCccCCCCCceEEEEecCchhhccCCccchhhHHHHhhhc----------cc-CCCCCC---CchHHH
Q 022463 182 SPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQA----------VF-PGLQGG---PHNHTI 247 (297)
Q Consensus 182 ~~~~~~D~~~~s~~K~l~gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~----------~~-~~~~~t---~~~~~~ 247 (297)
..+..+++.++|.||+++|++||+++++++...+ .+.+... .+ ....|+ ++....
T Consensus 174 ~~~~~i~~~S~s~~K~l~g~~~G~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 242 (388)
T 1b9h_A 174 GELDSIATFSFQNGKLMTAGEGGAVVFPDGETEK-----------YETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSA 242 (388)
T ss_dssp GGSSSCEEEECCTTSSSCSSSCEEEEECTTCHHH-----------HHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHH
T ss_pred ccccceEEEEccCCCcccCCCeEEEEECCHHHHH-----------HHHHHHHHhCCCCccCccceeecccccCCcCHHHH
Confidence 1111356667777899988888999988752100 1111100 00 011122 333333
Q ss_pred HHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 248 TGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 248 ~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
+++..+++ .+++..++.+++.+++.+.|++++.++
T Consensus 243 a~~~~~~~------~l~~~~~~~~~~~~~l~~~L~~~~~~~ 277 (388)
T 1b9h_A 243 SVLRAQLA------RLDEQIAVRDERWTLLSRLLGAIDGVV 277 (388)
T ss_dssp HHHHHHHT------THHHHHHHHHHHHHHHHHHHHTSTTCE
T ss_pred HHHHHHHH------HHHHHHHHHHHHHHHHHHHhccCCCcc
Confidence 33322222 455677777788999999998887654
No 58
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.88 E-value=8.1e-22 Score=192.45 Aligned_cols=228 Identities=17% Similarity=0.058 Sum_probs=162.5
Q ss_pred HHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeeeeEeeeccc
Q 022463 35 CQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 113 (297)
Q Consensus 35 ~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 113 (297)
.++.+++++|++. .+++++|+ +++.+++.++++|||+|+++.++|.++..... ..|..+..++...
T Consensus 210 ~ee~la~l~G~d~-----~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~--------~~G~~~v~v~~~~ 276 (755)
T 2vyc_A 210 SEKYAARVFGADR-----SWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLM--------LTGAKPVYMVPSR 276 (755)
T ss_dssp HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHH--------HHCCEEEEECCCB
T ss_pred HHHHHHHHhCCCc-----eEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHH--------HcCCEEEEEeCCC
Confidence 3489999999975 38888998 57888999999999999999999988765432 3344444443322
Q ss_pred CCC--CCcC-----CHHHHHHHhhhc-CCc--------EEEE-cCCCCCCcccHHHHHHHHHhcCCEEEEehhhhccccc
Q 022463 114 NES--TGYI-----DYDQLEKSATLF-RPK--------LIVA-GASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVA 176 (297)
Q Consensus 114 ~~~--~~~~-----d~~~l~~~l~~~-~~~--------~v~~-~~~~~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~ 176 (297)
+.. .+.+ |++++++++++. +++ ++++ +++.+|.+.|+++|.++|++||+++++|+||+.+...
T Consensus 277 ~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~pn~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~~ 356 (755)
T 2vyc_A 277 NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARF 356 (755)
T ss_dssp CTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESSCTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGGG
T ss_pred CccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECCCCCceecCHHHHHHHHHHcCCEEEEECcCchhccc
Confidence 200 1235 999999999762 333 7777 5544799999999999999999999999999764322
Q ss_pred ccC--CCCCCCC--ccE------EEecCCccCCCCCc-eEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchH
Q 022463 177 AGV--IPSPFEY--ADV------VTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNH 245 (297)
Q Consensus 177 ~~~--~~~~~~~--~D~------~~~s~~K~l~gp~g-G~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~ 245 (297)
.+. ...++.+ +|+ +++|+||+|+||.+ |+++++++.+. . + ...+.........++|+++
T Consensus 357 ~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~--i-------~-~~~~~~~~~~~~s~sp~~~ 426 (755)
T 2vyc_A 357 NPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGA--I-------N-FSRFNQAYMMHATTSPLYA 426 (755)
T ss_dssp CGGGTTSSSSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTC--C-------C-HHHHHHHHHHTSCSSCCHH
T ss_pred CcccCCcchhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCcccc--c-------C-HHHHHHHHHHhCCCCHHHH
Confidence 111 0111125 676 99999999999986 88888775100 0 0 1112211111225788999
Q ss_pred HHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCC
Q 022463 246 TITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSEN 286 (297)
Q Consensus 246 ~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~ 286 (297)
.++++.+|++.+... |.+...++..++.++++++|++++.
T Consensus 427 ~iaal~aA~~~l~~~-gg~~~~~~~~~~a~~~r~~L~~l~~ 466 (755)
T 2vyc_A 427 ICASNDVAVSMMDGN-SGLSLTQEVIDEAVDFRQAMARLYK 466 (755)
T ss_dssp HHHHHHHHHHHHSTH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999877 6678888999999999999988655
No 59
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.88 E-value=5e-22 Score=192.55 Aligned_cols=241 Identities=15% Similarity=0.047 Sum_probs=163.3
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeee
Q 022463 26 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 104 (297)
Q Consensus 26 ~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 104 (297)
....++| +.+++++|++. .+++++|+ ++|.+++.+++++||+|+++.+.|.+..... +...|.
T Consensus 173 ~~i~e~e----~~lA~~~gae~-----~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~-------~~l~Ga 236 (730)
T 1c4k_A 173 GPAVAAE----KHAARVYNADK-----TYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSA-------LAMAGG 236 (730)
T ss_dssp THHHHHH----HHHHHHTTCSE-----EEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHH-------TTTTCC
T ss_pred HHHHHHH----HHHHHHHCCCc-----EEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHH-------HHHCCC
Confidence 3455555 99999999985 38888998 5888899999999999999999998876531 122343
Q ss_pred eeEeeecccCCC--CCcCCHHHH-----HHHhhhcC-----C----cEEEE-cCCCCCCcccHHHHHHHHHhcCCEEEEe
Q 022463 105 FFETMPYRLNES--TGYIDYDQL-----EKSATLFR-----P----KLIVA-GASAYARLYDYERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 105 ~~~~v~~~~~~~--~~~~d~~~l-----~~~l~~~~-----~----~~v~~-~~~~~G~~~~~~~i~~la~~~g~~livD 167 (297)
.+..++...+.- .+.+|++++ ++++++.. + +++++ +++.+|.+.|+++|.++|+++|+++++|
T Consensus 237 ~~v~v~~~~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~pn~~G~v~dl~~I~~la~~~g~~livD 316 (730)
T 1c4k_A 237 RPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTYDGTIYNAHEVVKRIGHLCDYIEFD 316 (730)
T ss_dssp EEEEECEEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBCTTSEEECHHHHHHHHGGGBSEEEEE
T ss_pred EEEEEeCCccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECCCCCCeecCHHHHHHHHHHcCCeEEEE
Confidence 343343222200 134677777 88887621 4 88888 5544799999999999999999999999
Q ss_pred hhhhccccccc----CCCCCC--CCcc----EEEecCCccCCCCCc-eEEEEecCchhhccCCccchhhHHHHhhhcccC
Q 022463 168 MAHISGLVAAG----VIPSPF--EYAD----VVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFP 236 (297)
Q Consensus 168 ~a~~~g~~~~~----~~~~~~--~~~D----~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 236 (297)
+||+.+....+ ...... .++| ++++|+||+|+||.+ |+++++++.. .|.....+ ...++.....
T Consensus 317 eAh~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l----~g~~~~i~-~~~~~~~~~~ 391 (730)
T 1c4k_A 317 SAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHI----KGQLRYCD-HKHFNNSFNL 391 (730)
T ss_dssp CTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGG----TTSTTCCC-HHHHHHHHHH
T ss_pred cccccccccCcccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhh----cCcccccC-HHHHHHHHHH
Confidence 99975432111 111111 1677 999999999999887 7887877531 11000001 1112211111
Q ss_pred CCCCCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccC-CCCcc
Q 022463 237 GLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNN-SENIE 288 (297)
Q Consensus 237 ~~~~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~-~~~~~ 288 (297)
..+++|++..++++.+|++.+... +.+...++..++.+++++.|++ +++++
T Consensus 392 ~~stsp~~~~iaal~aA~~~l~~~-~g~~~~~~~~~~a~~lr~~L~~~i~g~~ 443 (730)
T 1c4k_A 392 FMSTSPFYPMYAALDVNAAMQEGE-AGRKLWHDLLITTIEARKKLIKAGSMFR 443 (730)
T ss_dssp HSCSSCCHHHHHHHHHHHHHHSHH-HHHHHHHHHHHHHHHHHHHHHHTTCSSE
T ss_pred hCCCCCcHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHhhhCCCeE
Confidence 125688999999999999998874 3355667788889999999887 55543
No 60
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.88 E-value=1.2e-22 Score=185.38 Aligned_cols=231 Identities=15% Similarity=0.151 Sum_probs=157.3
Q ss_pred HHHHHHHHHHcCCCCCCCcceEEecCChH-HHHHHHHHhc------CCCCe-EEEecCCCCCcccccccccccccceeee
Q 022463 33 SLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL------KPHDR-IMALDLPHGGHLSHGYQTDTKKISAVSI 104 (297)
Q Consensus 33 ~~~~~~la~~~g~~~~~~~~~v~~~sG~~-~~~~~~~~~~------~~gd~-Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 104 (297)
++.++++++++|+++++ +++++|++ ++..++.+++ ++||+ |+++..+|+++..++..+... . -.|.
T Consensus 74 ~~l~~~la~~~g~~~~~----v~~~~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~-~-~~g~ 147 (416)
T 1qz9_A 74 ERLGNRLATLIGARDGE----VVVTDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADM-L-QQGY 147 (416)
T ss_dssp HHHHHHHHTTTTCCTTS----EEECSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHH-H-CSSC
T ss_pred HHHHHHHHHHcCCCccc----EEEeCChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHH-h-cCCc
Confidence 34559999999998654 88887775 4444666665 89997 555556777665433221110 0 0022
Q ss_pred eeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCCC
Q 022463 105 FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 182 (297)
Q Consensus 105 ~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~~ 182 (297)
.+..+ +. ++++++.+++ +|++|++ +++| +|.+.|+++|.++|++||+++|+|++|+.|..+.++...
T Consensus 148 ~~~~v--~~--------~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~ 216 (416)
T 1qz9_A 148 TLRLV--DS--------PEELPQAIDQ-DTAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDLHQA 216 (416)
T ss_dssp EEEEE--SS--------GGGHHHHCST-TEEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHH
T ss_pred eEEEe--Cc--------HHHHHHHhCC-CceEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCcCCChhhc
Confidence 23333 22 6788899886 8898888 6666 799999999999999999999999999987665443222
Q ss_pred CCCCccEEEecCCccCC-CCCc-eEEEEecCchhh---ccCCccchhh---HHHHhhh--cccCCCCCCCchHHHHHHHH
Q 022463 183 PFEYADVVTTTTHKSLR-GPRG-AMIFFRKGVKEI---NKQGKEVFYD---YEEKINQ--AVFPGLQGGPHNHTITGLAV 252 (297)
Q Consensus 183 ~~~~~D~~~~s~~K~l~-gp~g-G~i~~~~~~~~~---~~~g~~~~~~---~~~~~~~--~~~~~~~~t~~~~~~~al~~ 252 (297)
++|++++|+||+++ |+++ |+++++++...+ ...|+.+... +...... .......++++...++++.+
T Consensus 217 ---~~d~~~~s~~K~l~~g~~~~g~l~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 293 (416)
T 1qz9_A 217 ---GADYAIGCTYKYLNGGPGSQAFVWVSPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVEC 293 (416)
T ss_dssp ---TCSEEEECSSSTTCCCTTCCCEEEECTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHH
T ss_pred ---CCCEEEecCcccCCCCCCCeEEEEECHHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHH
Confidence 58999999999975 5777 999998875322 2222211000 0000000 00011256788889999999
Q ss_pred HHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 253 ALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 253 al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
+++.+.+. +++++.++.+++.+++.+.|+++
T Consensus 294 al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 324 (416)
T 1qz9_A 294 GLDVFAQT-DMASLRRKSLALTDLFIELVEQR 324 (416)
T ss_dssp HHHHHTTS-CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhc-CHHHHHHHHHHHHHHHHHHHHhh
Confidence 99988777 89999999999999999999875
No 61
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.87 E-value=5.3e-22 Score=185.30 Aligned_cols=252 Identities=9% Similarity=0.008 Sum_probs=166.4
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHcCCCCCCC-----cceEEecCCh-HHHHHHHHHhcC---C------CC--------e
Q 022463 20 RYYGGNEYIDMAESLCQKRALEAFRLDPEKW-----GVNVQSLSGS-PSNFQVYTALLK---P------HD--------R 76 (297)
Q Consensus 20 ~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~-----~~~v~~~sG~-~~~~~~~~~~~~---~------gd--------~ 76 (297)
..|...+...++|+.+++++++++|++.+.. ...+++++|+ .+|+.++.+... + || .
T Consensus 103 ~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~ 182 (486)
T 1js3_A 103 FSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEK 182 (486)
T ss_dssp SSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHH
T ss_pred cccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCC
Confidence 3345567789999999999999999975310 0124555555 577766655421 1 42 3
Q ss_pred --EEEecCCCCCcccccccccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCc------EEEE-cCCC-CCC
Q 022463 77 --IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPK------LIVA-GASA-YAR 146 (297)
Q Consensus 77 --Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~------~v~~-~~~~-~G~ 146 (297)
|+++..+|.++... +...|..++.+ +.+ +++.+|+++|+++|++ +++ +|++ +++| +|.
T Consensus 183 ~~v~~s~~~h~s~~~~--------~~~~G~~v~~v--~~d-~~~~~d~~~L~~~i~~-~~~~g~~p~~vv~~~~~n~tG~ 250 (486)
T 1js3_A 183 LVAYASDQAHSSVERA--------GLIGGVKLKAI--PSD-GKFAMRASALQEALER-DKAAGLIPFFVVATLGTTSCCS 250 (486)
T ss_dssp EEEEEETTCCHHHHHH--------HHHHTCEEEEE--CCC-TTSCCCHHHHHHHHHH-HHHTTCEEEEEEEEBSCTTTCC
T ss_pred EEEEECCCCcHHHHHH--------HHhCCCceEEe--ecC-CCCCCCHHHHHHHHHH-HHhCCCCceEEEEeCCCCCCCC
Confidence 77888888776433 23344444444 455 6789999999999986 443 6666 5655 899
Q ss_pred cccHHHHHHHHHhcCCEEEEehhhhcccccccCCCC---CCCCccEEEecCCccCCCCCc-eEEEEecCchh-hccCCcc
Q 022463 147 LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS---PFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKE-INKQGKE 221 (297)
Q Consensus 147 ~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~~---~~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~-~~~~g~~ 221 (297)
+.|+++|.++|++||+++|+|+||+.+....+.... .+.++|++++++|||+++|.+ |+++++++... +...-..
T Consensus 251 ~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~~~G~l~~~~~~~l~~~~~~~~ 330 (486)
T 1js3_A 251 FDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKLDP 330 (486)
T ss_dssp BCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESCHHHHHGGGC---
T ss_pred CCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCcceEEEEEeCHHHHHHHhcCCc
Confidence 999999999999999999999999887754421111 113689999999999998888 99999875311 1100000
Q ss_pred chhhHHHH--h-----hhcccCCCCCCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 222 VFYDYEEK--I-----NQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 222 ~~~~~~~~--~-----~~~~~~~~~~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
.+... . ..........+... ...+++++++.+... |++++.++..++++++.+.|++.+.++
T Consensus 331 ---~yl~~~~~~~~~~~~~~~~~~~~~rr~-~~~~~~~al~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~ 399 (486)
T 1js3_A 331 ---VYLKHSHQGSGLITDYRHWQLPLGRRF-RSLKMWFVFRMYGVK-GLQAYIRKHVQLSHEFEAFVLQDPRFE 399 (486)
T ss_dssp ------------CCSCCCGGGSSSCSCCCC-THHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCTTEE
T ss_pred ---hhhCCCcccccCCCCccccCCCCCCch-hHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 00000 0 00000011112121 345677888888777 999999999999999999999987765
No 62
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.87 E-value=1.8e-21 Score=178.73 Aligned_cols=212 Identities=15% Similarity=0.139 Sum_probs=156.9
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeee
Q 022463 26 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 105 (297)
Q Consensus 26 ~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 105 (297)
+...+++ +++++++|++. .+++++|++++..++.+++++||.|+++...|++..... ...|..
T Consensus 109 ~~~~~l~----~~la~~~g~~~-----~i~~~sGs~a~~~al~~l~~~gd~vl~~~~~h~~~~~~~--------~~~g~~ 171 (427)
T 2w8t_A 109 HDHMEVE----QALRDFYGTTG-----AIVFSTGYMANLGIISTLAGKGEYVILDADSHASIYDGC--------QQGNAE 171 (427)
T ss_dssp HHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHHSCTTCEEEEETTCCHHHHHHH--------HHSCSE
T ss_pred HHHHHHH----HHHHHHhCCCc-----eEEecCcHHHHHHHHHHhcCCCCEEEECCcccHHHHHHH--------HHcCCe
Confidence 5555666 88999999863 488999999888888889999999999998888765432 233333
Q ss_pred eEeeecccCCCCCcCCHHHHHHHhhhc---CCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhccccc----
Q 022463 106 FETMPYRLNESTGYIDYDQLEKSATLF---RPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVA---- 176 (297)
Q Consensus 106 ~~~v~~~~~~~~~~~d~~~l~~~l~~~---~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~---- 176 (297)
+ ++++ ..|+++|++.+++. ++++|++ +++| +|.+.|+++|.++|++||+++|+|++|+.+...
T Consensus 172 ~--~~~~------~~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~ 243 (427)
T 2w8t_A 172 I--VRFR------HNSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGR 243 (427)
T ss_dssp E--EEEC------TTCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSC
T ss_pred e--EEeC------CCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCC
Confidence 3 3333 25899999999863 6788888 5545 799999999999999999999999999987665
Q ss_pred -----ccCCCCCCCCccEEEecCCccCCCCCceEEEEecCchhhccCCccchhhHHHHhhhcccC-CCCCCCchHHHHHH
Q 022463 177 -----AGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFP-GLQGGPHNHTITGL 250 (297)
Q Consensus 177 -----~~~~~~~~~~~D~~~~s~~K~l~gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~t~~~~~~~al 250 (297)
.++.+ ++|++++|++|+++ +.||++++++++. +.+.....+ ...++.+...++++
T Consensus 244 ~~~~~~~~~~----~~di~~~s~sK~~g-~~gG~v~~~~~l~--------------~~l~~~~~~~~~~~~~~~~~~aa~ 304 (427)
T 2w8t_A 244 GVYEAQGLEG----QIDFVVGTFSKSVG-TVGGFVVSNHPKF--------------EAVRLACRPYIFTASLPPSVVATA 304 (427)
T ss_dssp CHHHHTTCTT----CCSEEEEESSSTTC-SCCEEEEECCTTG--------------GGGGGTCHHHHSSCCCCHHHHHHH
T ss_pred chHhhcCCCc----CCcEEEecchhhhc-cCCCEEEeCHHHH--------------HHHHHhcccccccCCCCHHHHHHH
Confidence 22211 67999999999984 7789999987542 212111000 01345667777887
Q ss_pred HHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 251 AVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 251 ~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
.++++.+. .+++++++.+++.+++.+.|+++
T Consensus 305 ~~al~~~~---~~~~~~~~~~~~~~~l~~~L~~~ 335 (427)
T 2w8t_A 305 TTSIRKLM---TAHEKRERLWSNARALHGGLKAM 335 (427)
T ss_dssp HHHHHHHT---SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHc
Confidence 88888875 35778888888999998888765
No 63
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.87 E-value=9.7e-22 Score=177.85 Aligned_cols=222 Identities=10% Similarity=0.064 Sum_probs=148.1
Q ss_pred chhHHHHHHHHHHHH-HHHcC-CCCCCCcceEEecCChHHHHHHHHHh-cCCCCeEEEecCCCCCcccccccccccccce
Q 022463 25 NEYIDMAESLCQKRA-LEAFR-LDPEKWGVNVQSLSGSPSNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISA 101 (297)
Q Consensus 25 ~~~~~~~e~~~~~~l-a~~~g-~~~~~~~~~v~~~sG~~~~~~~~~~~-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~ 101 (297)
.+...++| +.+ ++++| .+. .++++||+.++..++.++ ++|||+|+++..+|.+...... .
T Consensus 35 ~~~~~~l~----~~~~a~~~g~~~~-----~v~~~sgt~al~~al~~l~~~~Gd~Vi~~~~~~~~~~~~~~--------~ 97 (377)
T 3ju7_A 35 GPINQRFE----QTIMSGFFQNRGA-----VTTVANATLGLMAAIQLKKRKKGKYALMPSFTFPATPLAAI--------W 97 (377)
T ss_dssp CHHHHHHH----HHHHHHTSTTCSE-----EEEESCHHHHHHHHHHHHSCTTCCEEEEESSSCTHHHHHHH--------H
T ss_pred CHHHHHHH----HHHHHHHhCCCCe-----EEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHHH--------H
Confidence 56778888 888 99999 333 377778888777788888 8999999999999888754332 2
Q ss_pred eeeeeEeeecccCCCCCcCCHHHHHHHh-hhcC--CcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEehhhhccccccc
Q 022463 102 VSIFFETMPYRLNESTGYIDYDQLEKSA-TLFR--PKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG 178 (297)
Q Consensus 102 ~g~~~~~v~~~~~~~~~~~d~~~l~~~l-~~~~--~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~ 178 (297)
.|. ++++++++++++.+|++++++++ ++ + |++|+.+ +.+|.+.|+++|.++|+ +|+++|+|++|+.|....+
T Consensus 98 ~G~--~~~~v~~~~~~~~~d~~~l~~~i~~~-~~~tk~v~~~-~~~G~~~~~~~i~~la~-~~~~vi~D~a~a~g~~~~~ 172 (377)
T 3ju7_A 98 CGL--EPYFIDISIDDWYMDKTVLWDKIEEL-KEEVAIVVPY-ATFGSWMNLEEYEELEK-KGVPVVVDAAPGFGLMNGG 172 (377)
T ss_dssp TTC--EEEEECBCTTTCSBCHHHHHHHHHHH-GGGEEEECCB-CGGGBCCCCHHHHHHHH-TTCCBEEECTTCTTCEETT
T ss_pred cCC--EEEEEecCCccCCcCHHHHHHHHhcC-CCCceEEEEE-CCCCCccCHHHHHHHHh-cCCEEEEECCCccCCeECC
Confidence 333 33444666567899999999998 55 6 8888752 12799999999999999 9999999999998875432
Q ss_pred CCC-CCCCCccEEEecCCccCCCCCceEEEEecCchhhccCCccchhhHHHHhhhccc-----------CCCCCCCchHH
Q 022463 179 VIP-SPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVF-----------PGLQGGPHNHT 246 (297)
Q Consensus 179 ~~~-~~~~~~D~~~~s~~K~l~gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-----------~~~~~t~~~~~ 246 (297)
... ..+..+++++++.+|+++++.||+++++++. +.+++..... .+.....+ .
T Consensus 173 ~~~g~~~~d~~~~S~~~~K~l~~g~gG~~~~~~~~-------------l~~~~~~~~~~g~~~~~~~~~~g~~~~~~--~ 237 (377)
T 3ju7_A 173 MHYGQDFSGMIIYSFHATKPFGIGEGGLIYSKNEE-------------DIQRIKRMGNFGFDTNRECTMMGFNCKMS--E 237 (377)
T ss_dssp EETTTTCSSEEEEECBTTSSSCCBSCEEEEESCHH-------------HHHHHHHHTBTTBCTTSCBCSSCCBCCCC--H
T ss_pred EeccCCCCcEEEEECCCCCcCCCCCcEEEEECCHH-------------HHHHHHHHHhcCCCCCCceeeccccCCCC--H
Confidence 221 1111334445556899988767888887642 2222111111 11111111 1
Q ss_pred HHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCc
Q 022463 247 ITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENI 287 (297)
Q Consensus 247 ~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~ 287 (297)
+.+ ..++..+ . .++...++++++++++.+.|++++.+
T Consensus 238 ~~a-a~~~~~l--~-~l~~~~~~~~~~~~~~~~~L~~~~~~ 274 (377)
T 3ju7_A 238 YAA-AIGIATM--K-KWDDKLKERTRISEWYKQLLQSNGLM 274 (377)
T ss_dssp HHH-HHHHHHH--H-THHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred HHH-HHHHHHH--H-HHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 111 1122222 3 66778888888999999888887643
No 64
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.87 E-value=2.4e-21 Score=178.56 Aligned_cols=160 Identities=17% Similarity=0.112 Sum_probs=123.4
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEecCCCCCcccccc-cccccccceee
Q 022463 25 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGY-QTDTKKISAVS 103 (297)
Q Consensus 25 ~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~-~~~~~~~~~~g 103 (297)
++..+++| +++++++|++. .++++||++++..++.+++++||+|+++...|++....+. .+... |
T Consensus 113 ~~~~~~l~----~~lA~l~g~~~-----~v~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~-----G 178 (445)
T 1qgn_A 113 NPTTVVLE----EKISALEGAES-----TLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKM-----G 178 (445)
T ss_dssp CHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGG-----T
T ss_pred ChHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHc-----C
Confidence 34555566 89999999863 4999999988877888899999999999988877654322 11222 2
Q ss_pred eeeEeeecccCCCCCcCCHHHHHHHhhhcCC-cEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCC
Q 022463 104 IFFETMPYRLNESTGYIDYDQLEKSATLFRP-KLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180 (297)
Q Consensus 104 ~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~-~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~ 180 (297)
..+..+ +.+ |++++++++++ +| ++|++ +++| +|.+.|+++|.++|+++|+++|+|++|+.+..... .
T Consensus 179 ~~v~~v--~~~------d~~~l~~ai~~-~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~~~-~ 248 (445)
T 1qgn_A 179 ITATVI--DPA------DVGALELALNQ-KKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQKA-L 248 (445)
T ss_dssp CEEEEE--CSS------CHHHHHHHHHH-SCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCT-T
T ss_pred CEEEEe--CCC------CHHHHHHHhcc-CCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCc-c
Confidence 223333 332 89999999998 88 99999 7777 79999999999999999999999999987654322 1
Q ss_pred CCCCCCccEEEecCCccCCCCC---ceEEEEecC
Q 022463 181 PSPFEYADVVTTTTHKSLRGPR---GAMIFFRKG 211 (297)
Q Consensus 181 ~~~~~~~D~~~~s~~K~l~gp~---gG~i~~~~~ 211 (297)
.. ++|++++|+||+++++. +|+++.+++
T Consensus 249 ~~---g~Div~~S~sK~~gg~gd~~~G~l~~~~~ 279 (445)
T 1qgn_A 249 AL---GADLVLHSATKFLGGHNDVLAGCISGPLK 279 (445)
T ss_dssp TT---TCSEEEECTTTTTTCSSSCCCEEEEECHH
T ss_pred cc---CCEEEEECCcccccccccceEEEEEECHH
Confidence 22 79999999999998775 799998874
No 65
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.87 E-value=7.1e-22 Score=179.13 Aligned_cols=228 Identities=14% Similarity=0.097 Sum_probs=154.2
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHh-cCCCCeEEEecCCCCCccccccccccccccee
Q 022463 24 GNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAV 102 (297)
Q Consensus 24 ~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~ 102 (297)
..+...+++ +.++++++.+. .+++++|+.++..++.++ +++||+|+++..+|++....+. ..
T Consensus 54 ~~~~~~~l~----~~la~~~~~~~-----~i~~~~gt~al~~~l~~~~~~~gd~vl~~~~~~~~~~~~~~--------~~ 116 (391)
T 3dr4_A 54 VGRFIVEFE----KAFADYCGVKH-----AIACNNGTTALHLALVAMGIGPGDEVIVPSLTYIASANSVT--------YC 116 (391)
T ss_dssp CSHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHTCCTTCEEEEESSSCTHHHHHHH--------HT
T ss_pred CChHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHcCCCCcCEEEECCCchHHHHHHHH--------HC
Confidence 456677777 88999999873 377778877887788888 9999999999998888755433 22
Q ss_pred eeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCCC
Q 022463 103 SIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 182 (297)
Q Consensus 103 g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~~ 182 (297)
|..+ ++++.+++++.+|++++++.+++ ++++|+++ +.+|...|+++|.++|+++|+++|+|++|+.|....+....
T Consensus 117 g~~~--~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~-n~tG~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~ 192 (391)
T 3dr4_A 117 GATP--VLVDNDPRTFNLDAAKLEALITP-RTKAIMPV-HLYGQICDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSG 192 (391)
T ss_dssp TCEE--EEECBCTTTCSBCGGGSGGGCCT-TEEEECCB-CGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETT
T ss_pred CCEE--EEEecCccccCcCHHHHHHhcCC-CceEEEEE-CCCCChhhHHHHHHHHHHcCCEEEEECcccccceECCeeec
Confidence 3223 44456656788999999999987 88888752 13799999999999999999999999999988776543322
Q ss_pred CCCCccEEEec--CCccCCCCCceEEEEecCc-hh--h-ccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHHHHHHH
Q 022463 183 PFEYADVVTTT--THKSLRGPRGAMIFFRKGV-KE--I-NKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 256 (297)
Q Consensus 183 ~~~~~D~~~~s--~~K~l~gp~gG~i~~~~~~-~~--~-~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~ 256 (297)
. ..|+.++| .+|+++++.||+++++++. .. + ...++... . ..+.....+.. ..+.++.+++..
T Consensus 193 ~--~~di~~~S~s~~K~l~~g~gg~~~~~~~~~~~~~~~~~~~g~~~-~------~~~~~~~~g~~--~~~~~l~aa~~~ 261 (391)
T 3dr4_A 193 S--LGDCATFSFFGNAIITTGEGGMITTNDDDLAAKMRLLRGQGMDP-N------RRYWFPIVGFN--YRMTNIQAAIGL 261 (391)
T ss_dssp S--SSSEEEEECBTTSSSCCBSCEEEEESCHHHHHHHHHHHBTTCCT-T------STTCCSSCCCB--CBCCHHHHHHHH
T ss_pred c--cCCEEEEECCCCCcCCcCCeEEEEECCHHHHHHHHHHHhcCCCC-C------Ccccccccccc--cCCCHHHHHHHH
Confidence 2 13555555 7799988777888887642 11 1 11110000 0 00000001110 112233444444
Q ss_pred HhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 257 VCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 257 ~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
.... +++++.++.+++.+++.+.|+++
T Consensus 262 ~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 288 (391)
T 3dr4_A 262 AQLE-RVDEHLAARERVVGWYEQKLARL 288 (391)
T ss_dssp HHHH-THHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHhhcC
Confidence 4444 78889999999999999999887
No 66
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.87 E-value=3.7e-22 Score=184.47 Aligned_cols=219 Identities=16% Similarity=0.097 Sum_probs=152.7
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeee
Q 022463 26 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 104 (297)
Q Consensus 26 ~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 104 (297)
....+++ +++++ +|++. .+++++|+ +++..++++++++||+|+++..+|.+....+. ..|.
T Consensus 57 ~~~~~~~----~~la~-~g~~~-----~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~--------~~G~ 118 (446)
T 2x3l_A 57 EVILKSM----KQVEK-HSDYD-----GYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALD--------ISQQ 118 (446)
T ss_dssp SHHHHHH----HHHCS-CTTEE-----EEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHH--------HHTC
T ss_pred hHHHHHH----HHHHh-cCCCc-----eEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHH--------HcCC
Confidence 3445555 99999 99873 38888887 58887888889999999999988888765443 2333
Q ss_pred eeEeeecccCCCC---CcCCHHHHHHHhhhcCCcEEEE-cCCCCCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCC
Q 022463 105 FFETMPYRLNEST---GYIDYDQLEKSATLFRPKLIVA-GASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180 (297)
Q Consensus 105 ~~~~v~~~~~~~~---~~~d~~~l~~~l~~~~~~~v~~-~~~~~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~ 180 (297)
.+..++...+++. +.+|++.+ +.+ ++++|++ +++++|.+.|+++|.++|++||+++|+|++|+. ...+.-.
T Consensus 119 ~~~~v~~~~~~~~~~~~~~d~~~l---~~~-~~~~v~~~~~n~~G~~~~l~~I~~l~~~~~~~livDea~~~-~~~f~~~ 193 (446)
T 2x3l_A 119 EGHFIETHQSPLTNHYNKVNLSRL---NND-GHKLVVLTYPNYYGETFNVEEVIKSLHQLNIPVLIDEAHGA-HFGLQGF 193 (446)
T ss_dssp CEEECEEEECTTTSSEEEEEC-----------CCEEEEESSCTTSCCCCHHHHHHHHHHTTCCEEEECTTCT-TTTSTTS
T ss_pred eEEEEeCeeccccCcCCCCCHHHH---cCC-CceEEEEECCCCCeEecCHHHHHHHHHhcCCeEEEcchhhh-hhccCCC
Confidence 3434443224221 56788877 444 7899988 644489999999999999999999999999987 3322111
Q ss_pred CCCC-C-CccEEEecCCccCCCCCc-eEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHHHHHHHH
Q 022463 181 PSPF-E-YADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQV 257 (297)
Q Consensus 181 ~~~~-~-~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~ 257 (297)
+... . ++|++++|+||+++++.| |+++++++.. + ...+.........++++...++++.++++++
T Consensus 194 ~~~~~~~g~Di~~~S~~K~l~~~~g~g~l~~~~~~i-----------~-~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l 261 (446)
T 2x3l_A 194 PDSTLNYQADYVVQSFHKTLPALTMGSVLYIHKNAP-----------Y-RENIIEYLSYFQTSSPSYLIMASLESAAQFY 261 (446)
T ss_dssp CCCGGGGTCSEEEECHHHHSSSCTTCEEEEEETTCT-----------T-HHHHHHHHHHHSCSSCCHHHHHHHHHHHHHH
T ss_pred CCChHHcCCCEEEECCccccccccccEEEEEcCCcC-----------C-HHHHHHHHHHHcCCCchHHHHHHHHHHHHHH
Confidence 1111 1 689999999999988877 9999988631 1 1111111111125677888889999999988
Q ss_pred hhhcChhhHHHHhhhhHHHHHhh
Q 022463 258 CTLITFSHIHVFSLHVYPAFVSN 280 (297)
Q Consensus 258 ~~~~g~~~~~~~~~~l~~~l~~~ 280 (297)
... |.+++.++.+++.+++++.
T Consensus 262 ~~~-g~~~~~~~~~~l~~~l~~~ 283 (446)
T 2x3l_A 262 KTY-DSTLFFAKRAQLIECLENK 283 (446)
T ss_dssp HHC-CCHHHHHHHHHHHHHHHHH
T ss_pred HHh-CHHHHHHHHHHHHHHHHHc
Confidence 877 8777889999999998886
No 67
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.87 E-value=1.3e-21 Score=183.17 Aligned_cols=250 Identities=13% Similarity=0.074 Sum_probs=167.1
Q ss_pred cCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHh----c---------CC------CC-eEEE
Q 022463 21 YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTAL----L---------KP------HD-RIMA 79 (297)
Q Consensus 21 ~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~----~---------~~------gd-~Vl~ 79 (297)
.|...+...++|+.+++++++++|+++.+ .+++++|+ .+|..++.+. + ++ || .|++
T Consensus 131 ~~~~~~~~~~le~~~~~~la~~~g~~~~~---~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~ 207 (497)
T 2qma_A 131 SWDQASSATYVEQKVVNWLCDKYDLSEKA---DGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVC 207 (497)
T ss_dssp CGGGCHHHHHHHHHHHHHHHHHTTCCTTC---EEEEESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEE
T ss_pred chhhChHHHHHHHHHHHHHHHHhCCCCCC---CeEEcCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEE
Confidence 34455778899999999999999997522 36666665 5776666552 2 12 46 7888
Q ss_pred ecCCCCCcccccccccccccceeee-eeEeeecccCCCCCcCCHHHHHHHhhhc---CCc--EEEE-cCCC-CCCcccHH
Q 022463 80 LDLPHGGHLSHGYQTDTKKISAVSI-FFETMPYRLNESTGYIDYDQLEKSATLF---RPK--LIVA-GASA-YARLYDYE 151 (297)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~v~~~~~~~~~~~d~~~l~~~l~~~---~~~--~v~~-~~~~-~G~~~~~~ 151 (297)
+..+|.+....+..+.. |. .++.+ +.+ +++.+|+++|+++|++. .++ +|++ +++| +|...|++
T Consensus 208 s~~~h~s~~~~~~~~g~------g~~~v~~v--~~~-~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~ 278 (497)
T 2qma_A 208 SKKSHFTVQKSASWMGL------GEKAVMTV--DAN-ADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLD 278 (497)
T ss_dssp ETTSCTHHHHHHHHTTS------CGGGEEEE--CBC-TTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHH
T ss_pred CCCchHHHHHHHHHcCC------CcccEEEE--ecC-CCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHH
Confidence 88889887654443221 11 23344 455 56899999999999863 233 5665 4555 79999999
Q ss_pred HHHHHHHhcCCEEEEehhhhcccccccCCC--CCCCCccEEEecCCccCCCCCc-eEEEEecCchhh-ccCCccchhhHH
Q 022463 152 RIRKVCNKQKAIMLADMAHISGLVAAGVIP--SPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI-NKQGKEVFYDYE 227 (297)
Q Consensus 152 ~i~~la~~~g~~livD~a~~~g~~~~~~~~--~~~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~-~~~g~~~~~~~~ 227 (297)
+|.++|++||+++|+|++|+.+..+.+... ..+.++|++++|+|||+++|.+ |+++++++.... +.... .+.
T Consensus 279 ~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p~~~G~l~~~~~~~~~~~~~~~----~yl 354 (497)
T 2qma_A 279 FIADMAVKHDMWMHVDGAYGGALILSSHKSRLKGVERAHSISVDFHKLFYQTISCGALLVNDKSNFKFLLHHA----DYL 354 (497)
T ss_dssp HHHHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTGGGCSEEEEETTTTTCCCSSCEEEEESCGGGGGGGCC---------
T ss_pred HHHHHHHHcCCEEEEehhhhHHHHhCcchHhhcCcccCCEEEEcchhccCCCcceEEEEEeCHHHHHHhcCCc----hhc
Confidence 999999999999999999998877655110 0112689999999999999988 999988754221 11110 010
Q ss_pred HHhh---hccc-CCCCCCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 228 EKIN---QAVF-PGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 228 ~~~~---~~~~-~~~~~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
.... .... .....+..+. ..+++++++.+... |++++.++..++++++.+.|++.+.++
T Consensus 355 ~~~~~~~~~~~~~~~~~~r~~~-al~~~~~l~~lg~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~ 417 (497)
T 2qma_A 355 NREHDELPNLVDKSIATTKRFD-ALKVFMTMQNVGPK-ALGDMYDHLLAQTLEVADMIRTNDQFE 417 (497)
T ss_dssp ---------------CCSCCCT-HHHHHHHHHHTCHH-HHHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred CCccccCCCccccCCCCCCchh-HHHHHHHHHHhCHH-HHHHHHHHHHHHHHHHHHHHhhCCCeE
Confidence 0000 0000 0001111111 23566788888766 899999999999999999999987654
No 68
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.87 E-value=1.8e-21 Score=178.18 Aligned_cols=161 Identities=12% Similarity=0.027 Sum_probs=124.0
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEecCCCCCccccccc-cccccccee
Q 022463 24 GNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQ-TDTKKISAV 102 (297)
Q Consensus 24 ~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~-~~~~~~~~~ 102 (297)
+++..+++| +++++++|++. .+++++|+.++..++.+++++||+|+++..+|++...++.. +...+++
T Consensus 80 ~~p~~~~le----~~lA~l~g~~~-----~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~-- 148 (415)
T 2fq6_A 80 GTLTHFSLQ----QAMCELEGGAG-----CVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVT-- 148 (415)
T ss_dssp CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCE--
T ss_pred CCchHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcE--
Confidence 446667777 89999999864 37888888888778888899999999999888887655422 2222322
Q ss_pred eeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHh--cCCEEEEehhhhccccccc
Q 022463 103 SIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNK--QKAIMLADMAHISGLVAAG 178 (297)
Q Consensus 103 g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~--~g~~livD~a~~~g~~~~~ 178 (297)
+..+ +.+ |++++++++++ +|++|++ +++| +|.+.|+++|.++|++ +|+++|+|++|+.+.....
T Consensus 149 ---v~~v--~~~------d~~~le~ai~~-~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~~p 216 (415)
T 2fq6_A 149 ---TSWF--DPL------IGADIVKHLQP-NTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKA 216 (415)
T ss_dssp ---EEEE--CTT------CGGGGGGGCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSSCG
T ss_pred ---EEEE--CCC------CHHHHHHhhcc-CCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCcccccCCc
Confidence 3222 322 78899999987 8999999 7778 7999999999999999 9999999999986643211
Q ss_pred CCCCCCCCccEEEecCCccCCCCC---ceEEEEecC
Q 022463 179 VIPSPFEYADVVTTTTHKSLRGPR---GAMIFFRKG 211 (297)
Q Consensus 179 ~~~~~~~~~D~~~~s~~K~l~gp~---gG~i~~~~~ 211 (297)
+ .. ++|++++|+||+++++. +|+++.+++
T Consensus 217 ~-~~---g~Div~~S~sK~lg~~g~~~~G~l~~~~~ 248 (415)
T 2fq6_A 217 L-DF---GIDVSIQAATKYLVGHSDAMIGTAVCNAR 248 (415)
T ss_dssp G-GG---TCSEEEEETTTTTTCSSSCCCEEEEECTT
T ss_pred c-cc---CCeEEEEeCccccCCCCCceEEEEEeCHH
Confidence 1 12 78999999999998865 588888774
No 69
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.87 E-value=2.5e-21 Score=175.96 Aligned_cols=213 Identities=18% Similarity=0.180 Sum_probs=153.8
Q ss_pred HHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeeeeEeeeccc
Q 022463 34 LCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 113 (297)
Q Consensus 34 ~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 113 (297)
+.++.+++++|++ + .+++++|++++..++++++++||+|+++...|++.... +...|..+ ++++
T Consensus 94 ~l~~~la~~~g~~-~----~i~~~sGs~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~--------~~~~g~~~--~~~~- 157 (401)
T 1fc4_A 94 ELEQKLAAFLGME-D----AILYSSCFDANGGLFETLLGAEDAIISDALNHASIIDG--------VRLCKAKR--YRYA- 157 (401)
T ss_dssp HHHHHHHHHHTCS-E----EEEESCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHH--------HHTSCSEE--EEEC-
T ss_pred HHHHHHHHHhCCC-c----EEEeCChHHHHHHHHHHHcCCCCEEEEcchhHHHHHHH--------HHHcCCce--EEEC-
Confidence 3448899999987 3 48889999887778888899999999998888766432 22333333 3323
Q ss_pred CCCCCcCCHHHHHHHhhhc-----CCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhccccc-ccCC-C--C
Q 022463 114 NESTGYIDYDQLEKSATLF-----RPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVA-AGVI-P--S 182 (297)
Q Consensus 114 ~~~~~~~d~~~l~~~l~~~-----~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~-~~~~-~--~ 182 (297)
..|++++++.+++. ++++|++ +++| +|.+.|+++|.++|+++|+++|+|++|+.|... .+.. . .
T Consensus 158 -----~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~ 232 (401)
T 1fc4_A 158 -----NNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYC 232 (401)
T ss_dssp -----TTCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHT
T ss_pred -----CCCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHc
Confidence 24789999998753 6888888 6666 899999999999999999999999999877652 1100 0 0
Q ss_pred CC-CCccEEEecCCccCCCCCceEEEEecCchhhccCCccchhhHHHHhhhcccCC-CCCCCchHHHHHHHHHHHHHhhh
Q 022463 183 PF-EYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPG-LQGGPHNHTITGLAVALKQVCTL 260 (297)
Q Consensus 183 ~~-~~~D~~~~s~~K~l~gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~t~~~~~~~al~~al~~~~~~ 260 (297)
.. .+.|+++.|+||+++++.||+++++++ +.+.+.....+. ..++++....+++.++++.+.+
T Consensus 233 ~~~~~~di~~~s~sK~~~~~~gG~~~~~~~--------------~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~- 297 (401)
T 1fc4_A 233 DVMGRVDIITGTLGKALGGASGGYTAARKE--------------VVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEA- 297 (401)
T ss_dssp TCTTCCSEEEEESSSTTCSSSCEEEEECHH--------------HHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHT-
T ss_pred CCCcCCcEEEecchhhccCCCCEEEEcCHH--------------HHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHhc-
Confidence 00 157999999999996767899998773 333333221111 1346677888888888887753
Q ss_pred cChhhHHHHhhhhHHHHHhhccCC
Q 022463 261 ITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 261 ~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
.+++.++.+++.+++.+.|+++
T Consensus 298 --~~~~~~~~~~~~~~l~~~L~~~ 319 (401)
T 1fc4_A 298 --GSELRDRLWANARQFREQMSAA 319 (401)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHT
T ss_pred --CHHHHHHHHHHHHHHHHHHHHc
Confidence 4678888888889998888776
No 70
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.87 E-value=2.3e-21 Score=176.86 Aligned_cols=217 Identities=13% Similarity=0.109 Sum_probs=156.0
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeee
Q 022463 26 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 105 (297)
Q Consensus 26 ~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 105 (297)
+...+++ ++++++++.+. .+++++|++++..++.+++++||.|+++...|++..... ...|..
T Consensus 104 ~~~~~l~----~~la~~~g~~~-----~i~~~sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~--------~~~g~~ 166 (409)
T 3kki_A 104 YDKPMIE----KRLAKFTGFDE-----CLLSQSGWNANVGLLQTICQPNTNVYIDFFAHMSLWEGA--------RYANAQ 166 (409)
T ss_dssp TTSCHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHH--------HHTTCE
T ss_pred HHHHHHH----HHHHHHhCCCe-----EEEecchHHHHHHHHHHhcCCCCEEEECCCcCHHHHHHH--------HHcCCe
Confidence 3444555 88999999875 388899998888889999999999999998887765432 222322
Q ss_pred eEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCC--
Q 022463 106 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP-- 181 (297)
Q Consensus 106 ~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~-- 181 (297)
+ ++++ ..|++++++++++.++++|++ +++| +|.+.|+++|.++|++||+++|+|++|+.+........
T Consensus 167 ~--~~~~------~~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~ 238 (409)
T 3kki_A 167 A--HPFM------HNNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLGTHGPNGAGLL 238 (409)
T ss_dssp E--EEEC------TTCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHH
T ss_pred E--EEec------CCCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCcch
Confidence 3 3322 258999999998757899988 5666 79999999999999999999999999987654211000
Q ss_pred --CC-CCCccEEEecCCccCCCCCceEEEEecCchhhccCCccchhhHHHHhhhcccCC-CCCCCchHHHHHHHHHHHHH
Q 022463 182 --SP-FEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPG-LQGGPHNHTITGLAVALKQV 257 (297)
Q Consensus 182 --~~-~~~~D~~~~s~~K~l~gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~t~~~~~~~al~~al~~~ 257 (297)
.. ...+|+++.|++|+++++ ||+++.+++.. +.+.....+. ..++.+...++++.++++.+
T Consensus 239 ~~~~~~~~~di~~~s~sK~~~~~-gg~v~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~ 303 (409)
T 3kki_A 239 AELGLTREVHFMTASLAKTFAYR-AGAIWCNNEVN--------------RCVPFISYPAIFSSTLLPYEAAGLETTLEII 303 (409)
T ss_dssp HHHTCGGGCSEEEEESSSTTCSS-CEEEEESSSGG--------------GTHHHHCHHHHHSBCCCHHHHHHHHHHHHHH
T ss_pred hhcCCCCCCCEEEeecchhhCCC-ceEEEECHHHH--------------HHHHHhCcCccccCCCcHHHHHHHHHHHHHH
Confidence 00 015799999999998665 89999888542 1111100000 02345667777888888877
Q ss_pred hhhcChhhHHHHhhhhHHHHHhhccCCC
Q 022463 258 CTLITFSHIHVFSLHVYPAFVSNQNNSE 285 (297)
Q Consensus 258 ~~~~g~~~~~~~~~~l~~~l~~~l~~~~ 285 (297)
.+. +.++++.+++.+++.+.|+++.
T Consensus 304 ~~~---~~~~~~~~~~~~~l~~~L~~~g 328 (409)
T 3kki_A 304 ESA---DNRRQHLDRMARKLRIGLSQLG 328 (409)
T ss_dssp HHC---HHHHHHHHHHHHHHHHHHHTTT
T ss_pred hcC---HHHHHHHHHHHHHHHHHHHHcC
Confidence 643 6788888889999999998763
No 71
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.87 E-value=7.3e-21 Score=171.86 Aligned_cols=220 Identities=15% Similarity=0.098 Sum_probs=157.0
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeee
Q 022463 25 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 104 (297)
Q Consensus 25 ~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 104 (297)
.+...+++ +.+++++|++. .+++++|++++..++.+++++||.|+++...|++....+. ..|.
T Consensus 83 ~~~~~~l~----~~la~~~g~~~-----~i~~~sGt~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~--------~~g~ 145 (384)
T 1bs0_A 83 SVVHQALE----EELAEWLGYSR-----ALLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEAAS--------LSPS 145 (384)
T ss_dssp CHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHH--------TSSS
T ss_pred hHHHHHHH----HHHHHHhCCCc-----EEEeCCcHHHHHHHHHHhCCCCcEEEEcccccHHHHHHHH--------HcCC
Confidence 35555666 88999999862 4889999888777888889999999999888876654332 2233
Q ss_pred eeEeeecccCCCCCcCCHHHHHHHhhhc--CCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccc-cC
Q 022463 105 FFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAA-GV 179 (297)
Q Consensus 105 ~~~~v~~~~~~~~~~~d~~~l~~~l~~~--~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~-~~ 179 (297)
.+..+ + ..|++++++.+++. ++++|++ +++| +|.+.|+++|.++|++||+++|+|++|+.+.... +.
T Consensus 146 ~~~~~--~------~~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~ 217 (384)
T 1bs0_A 146 QLRRF--A------HNDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGR 217 (384)
T ss_dssp EEEEE--C------TTCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGC
T ss_pred CEEEe--C------CCCHHHHHHHHHhcCCCCeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCC
Confidence 33333 3 24799999999863 2667777 5667 8999999999999999999999999998775421 10
Q ss_pred C-CCCC-CCccEEEecCCccCCCCCceEEEEecCchhhccCCccchhhHHHHhhhcccCC-CCCCCchHHHHHHHHHHHH
Q 022463 180 I-PSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPG-LQGGPHNHTITGLAVALKQ 256 (297)
Q Consensus 180 ~-~~~~-~~~D~~~~s~~K~l~gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~t~~~~~~~al~~al~~ 256 (297)
. ...+ .+.|++++|+||+++ |.||+++++++ +.+.+.....+. ..++++....+++.++++.
T Consensus 218 ~~~~~~~~~~di~~~s~sK~~~-~~GG~~~~~~~--------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~ 282 (384)
T 1bs0_A 218 GSCWLQKVKPELLVVTFGKGFG-VSGAAVLCSST--------------VADYLLQFARHLIYSTSMPPAQAQALRASLAV 282 (384)
T ss_dssp CHHHHTTCCCSEEEEESSSTTS-SCCEEEEECHH--------------HHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHH
T ss_pred chHHhcCCCCcEEEeeccchhh-ccCcEEEeCHH--------------HHHHHHHhchhhhcCCCCCHHHHHHHHHHHHH
Confidence 0 0001 157999999999985 77899999873 333333211111 1235677788888888888
Q ss_pred HhhhcChhhHHHHhhhhHHHHHhhccCCC
Q 022463 257 VCTLITFSHIHVFSLHVYPAFVSNQNNSE 285 (297)
Q Consensus 257 ~~~~~g~~~~~~~~~~l~~~l~~~l~~~~ 285 (297)
+.+. ..+++.++.+++.+++.+.|+++.
T Consensus 283 ~~~~-~~~~~~~~~~~~~~~l~~~L~~~g 310 (384)
T 1bs0_A 283 IRSD-EGDARREKLAALITRFRAGVQDLP 310 (384)
T ss_dssp HHSH-HHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred Hhcc-ccHHHHHHHHHHHHHHHHHHHhcC
Confidence 7643 456788889999999999998863
No 72
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.87 E-value=1.3e-21 Score=176.92 Aligned_cols=234 Identities=12% Similarity=0.094 Sum_probs=160.0
Q ss_pred HHHHHHHHHHHHHHHcC--CCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeee
Q 022463 28 IDMAESLCQKRALEAFR--LDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 104 (297)
Q Consensus 28 ~~~~e~~~~~~la~~~g--~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 104 (297)
..++++.+++++++.+| ++++ .+++++|+ .++..++.+++++||+|+++..+|++...... ..|.
T Consensus 64 ~~~l~~~la~~l~~~~g~~~~~~----~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~--------~~g~ 131 (391)
T 3dzz_A 64 PAEYYKAVADWEEIEHRARPKED----WCVFASGVVPAISAMVRQFTSPGDQILVQEPVYNMFYSVIE--------GNGR 131 (391)
T ss_dssp CHHHHHHHHHHHHHHHSCCCCGG----GEEEESCHHHHHHHHHHHHSCTTCEEEECSSCCHHHHHHHH--------HTTC
T ss_pred CHHHHHHHHHHHHHHhCCCCCHH----HEEECCCHHHHHHHHHHHhCCCCCeEEECCCCcHHHHHHHH--------HcCC
Confidence 47788888899999988 4554 48888886 57777888889999999999988777644322 2333
Q ss_pred eeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCc---ccHHHHHHHHHhcCCEEEEehhhhcccccc--
Q 022463 105 FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARL---YDYERIRKVCNKQKAIMLADMAHISGLVAA-- 177 (297)
Q Consensus 105 ~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~---~~~~~i~~la~~~g~~livD~a~~~g~~~~-- 177 (297)
.+..++++.+..++.+|++++++++++.++++|++ +++| +|.+ .++++|.++|++||+++|+|++|+......
T Consensus 132 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~ 211 (391)
T 3dzz_A 132 RVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDED 211 (391)
T ss_dssp EEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCC
T ss_pred EEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCC
Confidence 34344332122345699999999998448999888 6777 7877 678899999999999999999987544321
Q ss_pred --cCCCCCCCCcc--EEEecCCccCC--CCCceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHH
Q 022463 178 --GVIPSPFEYAD--VVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLA 251 (297)
Q Consensus 178 --~~~~~~~~~~D--~~~~s~~K~l~--gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~ 251 (297)
.+........| +++.|+||+++ |.+.|+++++++ ++.+.+..........+++.+..+++.
T Consensus 212 ~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~a~~ 278 (391)
T 3dzz_A 212 ITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNP-------------DLRARAEESFFLAGIGEPNLLAIPAAI 278 (391)
T ss_dssp CCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSH-------------HHHHHHHHHHHHHTCSSCCTTHHHHHH
T ss_pred ceehhhcCccccCcEEEEEeChhhccccchhheEEEECCH-------------HHHHHHHHHHHhhccCCCCHHHHHHHH
Confidence 11111001256 89999999873 344499998732 333333322111112345667777777
Q ss_pred HHHHHHhhhcChhhHHHHhhhhHHHHHhhccC-CCCcc
Q 022463 252 VALKQVCTLITFSHIHVFSLHVYPAFVSNQNN-SENIE 288 (297)
Q Consensus 252 ~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~-~~~~~ 288 (297)
++++.. +. .+++++++.+++.+++.+.|++ ++.++
T Consensus 279 ~~l~~~-~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 314 (391)
T 3dzz_A 279 AAYEEG-HD-WLRELKQVLRDNFAYAREFLAKEVPEVK 314 (391)
T ss_dssp HHHHHC-HH-HHHHHHHHHHHHHHHHHHHHHHHCTTSE
T ss_pred HHHhcc-HH-HHHHHHHHHHHHHHHHHHHHHhhCCCcE
Confidence 777652 23 5778888889999999999888 67654
No 73
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.86 E-value=1.1e-21 Score=180.20 Aligned_cols=171 Identities=14% Similarity=0.146 Sum_probs=124.6
Q ss_pred HHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEec-CCCCCccccccccc--ccccceeeeeeEe
Q 022463 32 ESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALD-LPHGGHLSHGYQTD--TKKISAVSIFFET 108 (297)
Q Consensus 32 e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~-~~~~~~~~~~~~~~--~~~~~~~g~~~~~ 108 (297)
++..++++++++|++.+. +.++++||+.++..++.++++|||+|+++. ..|.+......... .......|..+
T Consensus 67 ~~~l~~~la~~~g~~~~~--~~i~~~sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~-- 142 (431)
T 3ht4_A 67 RDTLEKVYADVFGAEAGL--VRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGY-- 142 (431)
T ss_dssp HHHHHHHHHHHTTCSEEC--CBTTSCSHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEE--
T ss_pred HHHHHHHHHHHhCCCccc--ccceeeCHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEE--
Confidence 334449999999997642 124478998888888899999999999987 67776653221000 01112223333
Q ss_pred eecccCCCCCcCCHHHHHHHhhhcCCcEEEE-c----CCC-CCCcccHHHHHHHHHh--cCCEEEEehhhhcccccccCC
Q 022463 109 MPYRLNESTGYIDYDQLEKSATLFRPKLIVA-G----ASA-YARLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVI 180 (297)
Q Consensus 109 v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~----~~~-~G~~~~~~~i~~la~~--~g~~livD~a~~~g~~~~~~~ 180 (297)
+.++.+ .++.+|++++++++++ +|++|++ + +++ ++...++++|.++|++ +|+++|+|++++.+.......
T Consensus 143 ~~v~~~-~~~~~d~e~l~~~l~~-~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~ 220 (431)
T 3ht4_A 143 NAVPLT-EGGLVDFEAVAAAIHS-NTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPC 220 (431)
T ss_dssp EECCBC-TTSSBCHHHHHHHCCT-TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGG
T ss_pred EEeCCC-CCCCcCHHHHHhhcCC-CCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCcc
Confidence 444555 4578999999999987 8999998 4 333 4677889999999999 999999999988776433222
Q ss_pred CCCCCCccEEEecCCccCCC---CCceEEEEecC
Q 022463 181 PSPFEYADVVTTTTHKSLRG---PRGAMIFFRKG 211 (297)
Q Consensus 181 ~~~~~~~D~~~~s~~K~l~g---p~gG~i~~~~~ 211 (297)
.. ++|++++|++|+|+| |.||+++++++
T Consensus 221 ~~---g~Di~~~S~sK~lgg~~~~~GG~v~~~~~ 251 (431)
T 3ht4_A 221 HV---GADLMAGSLIKNPGGGIVKTGGYIVGKEQ 251 (431)
T ss_dssp GT---TCSEEEEETTSGGGTTTCSSCEEEEECHH
T ss_pred cc---CCeEEEcCccccCCCCCCCceEEEEecHH
Confidence 22 789999999999876 78899999874
No 74
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.86 E-value=1.6e-21 Score=187.76 Aligned_cols=228 Identities=16% Similarity=0.068 Sum_probs=163.0
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCccccccccccccccee
Q 022463 24 GNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAV 102 (297)
Q Consensus 24 ~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~ 102 (297)
....+.++| +.+|++||++. .+++++|+ ++|.+++.++++|||+|+++.+.|.|.... +.+.
T Consensus 193 ~~g~i~eaE----~~lA~~fGa~~-----a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~--------l~ls 255 (715)
T 3n75_A 193 HSGPHKEAE----QYIARVFNADR-----SYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHL--------MMMS 255 (715)
T ss_dssp TBTHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHH--------HHHS
T ss_pred CcHHHHHHH----HHHHHHhCCCC-----ceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHH--------HHHc
Confidence 334566666 99999999986 38889997 688889999999999999999999888653 3344
Q ss_pred eeeeEeeecccCCCCCc----C-----CHHHHHHHhhhc-CCc---EEEE-cCCCCCCcccHHHHHHHHHhcCCEEEEeh
Q 022463 103 SIFFETMPYRLNESTGY----I-----DYDQLEKSATLF-RPK---LIVA-GASAYARLYDYERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 103 g~~~~~v~~~~~~~~~~----~-----d~~~l~~~l~~~-~~~---~v~~-~~~~~G~~~~~~~i~~la~~~g~~livD~ 168 (297)
|+....++...+ ++. + |+++|+++++++ +++ ++++ +++.+|.+.|+++|.++|++++ +++|+
T Consensus 256 Ga~pv~v~~~~~--~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~pn~~G~v~dl~~I~ela~~~~--livDE 331 (715)
T 3n75_A 256 DVTPIYFRPTRN--AYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDS 331 (715)
T ss_dssp CCEEEEECCCBC--TTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESSCTTSEEECHHHHHHHCCCSE--EEEEC
T ss_pred CCEEEEEecccc--ccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECCCCCCccCCHHHHHHHhCcCc--EEEcc
Confidence 544444432222 222 3 899999999862 234 6777 6644899999999999998774 79999
Q ss_pred hhhcccccccCC--CCCCC---CccEE---EecCCccCCCCCc-eEEEEecCchhhccCCccchhhHHHHhhhcccCCCC
Q 022463 169 AHISGLVAAGVI--PSPFE---YADVV---TTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQ 239 (297)
Q Consensus 169 a~~~g~~~~~~~--~~~~~---~~D~~---~~s~~K~l~gp~g-G~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 239 (297)
||+.+....+.. ..+.. .+|++ ++|+||+|+|+.+ |++.++++.. ..+++.......+
T Consensus 332 AH~~~~~f~~~~~~~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i~-------------~~~~~~~~~~~~S 398 (715)
T 3n75_A 332 AWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVN-------------EETFNEAYMMHTT 398 (715)
T ss_dssp TTCTTGGGSGGGTTSSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESCCC-------------HHHHHHHHHHTSC
T ss_pred ccccccccCCccccccccccCcCCCEEEEEEecccccccCCCCeeEEEeCchhh-------------HHHHHHHHHhhcC
Confidence 998775221111 11111 26765 8999999999855 8888887531 1222222222236
Q ss_pred CCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCC
Q 022463 240 GGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSEN 286 (297)
Q Consensus 240 ~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~ 286 (297)
++|+++.++++.+|++++.+..| +..+++..+++++|+++|++++.
T Consensus 399 TSpsy~~~AsldaA~~~~~~~~g-~~~~~~l~~~a~~~r~~L~~i~~ 444 (715)
T 3n75_A 399 TSPHYGIVASTETAAAMMKGNAG-KRLINGSIERAIKFRKEIKRLRT 444 (715)
T ss_dssp SSCCHHHHHHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHhhcc-HHHHHHHHHHHHHHHHHHHHhhh
Confidence 78999999999999999975314 44778888999999998887653
No 75
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.86 E-value=2.4e-21 Score=177.95 Aligned_cols=235 Identities=14% Similarity=0.051 Sum_probs=152.7
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceee
Q 022463 24 GNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS 103 (297)
Q Consensus 24 ~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 103 (297)
+++..+++| +++++++|.+. .++++||++++..++.+++++||+|+++...|++....+... +...|
T Consensus 80 ~~p~~~~le----~~lA~l~g~~~-----~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~----~~~~G 146 (430)
T 3ri6_A 80 SNPTVEDLE----QRLKNLTGALG-----VLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKT----LPSFG 146 (430)
T ss_dssp CCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTH----HHHTT
T ss_pred CCHHHHHHH----HHHHHHHCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHH----HHHcC
Confidence 346677777 99999999875 388899998887788899999999999998887765533211 11122
Q ss_pred eeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCC
Q 022463 104 IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP 181 (297)
Q Consensus 104 ~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~ 181 (297)
..+ ++++.+ |++++++++++ +|++|++ +++| +|.+.|+++|.++|+++|+++|+|++++.+.... ...
T Consensus 147 ~~~--~~v~~~------d~~~l~~ai~~-~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~~~-~~~ 216 (430)
T 3ri6_A 147 IEV--RFVDVM------DSLAVEHACDE-TTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYLLE-AKR 216 (430)
T ss_dssp CEE--EEECTT------CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTTCC-GGG
T ss_pred CEE--EEeCCC------CHHHHHHhhCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCC-hHH
Confidence 223 333332 89999999987 8999999 7888 7999999999999999999999999998776521 112
Q ss_pred CCCCCccEEEecCCccCCCC---CceEEEEecCchhhccCCc------cchhhHHHHhhhcccCCCCCCCchHHHHHHHH
Q 022463 182 SPFEYADVVTTTTHKSLRGP---RGAMIFFRKGVKEINKQGK------EVFYDYEEKINQAVFPGLQGGPHNHTITGLAV 252 (297)
Q Consensus 182 ~~~~~~D~~~~s~~K~l~gp---~gG~i~~~~~~~~~~~~g~------~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~ 252 (297)
. ++|++++|++|+|+|+ .||+++.+.+......... .+...+..+..........++.+....+.+..
T Consensus 217 ~---g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~l~ 293 (430)
T 3ri6_A 217 L---GVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAYLQSL 293 (430)
T ss_dssp G---TCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHH
T ss_pred c---CCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHh
Confidence 2 7999999999999887 5688876553211000000 00001112111111011122223232222223
Q ss_pred HHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcccc
Q 022463 253 ALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIEED 290 (297)
Q Consensus 253 al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~~ 290 (297)
+++. +....++..+.+.++.+.|++.|.++.+
T Consensus 294 ~l~~------l~~r~~~~~~na~~la~~L~~~p~v~~V 325 (430)
T 3ri6_A 294 GLET------MALRIERSCQNAQELAHWLLSIPQVKCV 325 (430)
T ss_dssp HHHH------HHHHHHHHHHHHHHHHHHHTTCTTCEEE
T ss_pred hhhh------HHHHHHHHHHHHHHHHHHHhCCCCccEE
Confidence 3333 3344555667778888888888887754
No 76
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.86 E-value=6.7e-21 Score=173.46 Aligned_cols=160 Identities=16% Similarity=0.179 Sum_probs=124.5
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEecCCCCCcccccccc-cccccceee
Q 022463 25 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQT-DTKKISAVS 103 (297)
Q Consensus 25 ~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-~~~~~~~~g 103 (297)
++..++++ +++++++|.+. .+++++|+.++..++.+++++||+|+++..+|++....+..+ ... |
T Consensus 64 ~~~~~~l~----~~la~~~g~~~-----~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~-----g 129 (398)
T 1gc0_A 64 NPTLNLLE----ARMASLEGGEA-----GLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEF-----G 129 (398)
T ss_dssp CHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGG-----T
T ss_pred ChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHc-----C
Confidence 35555666 89999999873 488999988888788888999999999999998876544221 122 2
Q ss_pred eeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCC
Q 022463 104 IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP 181 (297)
Q Consensus 104 ~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~ 181 (297)
..+..+ +. .|++++++.+++ +|++|++ +++| +|.+.|+++|.++|+++|+++|+|++|+.+.....+.
T Consensus 130 ~~~~~~--~~------~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~- 199 (398)
T 1gc0_A 130 VKLRHV--DM------ADLQALEAAMTP-ATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQRPLE- 199 (398)
T ss_dssp CEEEEE--CT------TCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHCCGGG-
T ss_pred CEEEEE--CC------CCHHHHHHhcCC-CCeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccccCCchh-
Confidence 223223 32 289999999987 8999998 6777 7999999999999999999999999998876543321
Q ss_pred CCCCCccEEEecCCccCCCCC---ceEEEEecC
Q 022463 182 SPFEYADVVTTTTHKSLRGPR---GAMIFFRKG 211 (297)
Q Consensus 182 ~~~~~~D~~~~s~~K~l~gp~---gG~i~~~~~ 211 (297)
. ++|++++|+||++++|. ||+++++++
T Consensus 200 ~---~~d~~~~S~sK~~~~~~~~~~G~l~~~~~ 229 (398)
T 1gc0_A 200 L---GADLVVHSATKYLSGHGDITAGIVVGSQA 229 (398)
T ss_dssp G---TCSEEEEETTTTTTCSSSCCCEEEEECHH
T ss_pred h---CceEEEECCccccCCCCCCeEEEEEEChH
Confidence 2 68999999999998876 588888764
No 77
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.86 E-value=2.7e-21 Score=174.02 Aligned_cols=227 Identities=11% Similarity=0.064 Sum_probs=156.8
Q ss_pred CCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHh-cCCCCeEEEecCCCCCcccccccccccccc
Q 022463 22 YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKIS 100 (297)
Q Consensus 22 ~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~ 100 (297)
|...+...+++ +.++++++.+. .+++++|++++..++.++ +++||+|+++..+|++......
T Consensus 34 ~~~~~~~~~l~----~~la~~~~~~~-----~~~~~~gt~a~~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~-------- 96 (374)
T 3uwc_A 34 FTLGAELEKFE----KRFAALHNAPH-----AIGVGTGTDALAMSFKMLNIGAGDEVITCANTFIASVGAIV-------- 96 (374)
T ss_dssp CSSCHHHHHHH----HHHHHHTTCSE-----EEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHHHHHHH--------
T ss_pred cccChhHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHHHHHH--------
Confidence 33456677777 89999999873 367777777887788888 9999999999988887754322
Q ss_pred eeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEEcCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccC
Q 022463 101 AVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV 179 (297)
Q Consensus 101 ~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~ 179 (297)
..|..+ +.++.+ +++.+|++++++.+++ ++++|+ ++| +|...|+++|.++|+++|+++|+|++|+.|... +.
T Consensus 97 ~~g~~~--~~~~~~-~~~~~d~~~l~~~~~~-~~~~v~--~~n~~G~~~~~~~i~~~~~~~~~~li~D~~~~~g~~~-~~ 169 (374)
T 3uwc_A 97 QAGATP--VLVDSE-NGYVIDPEKIEAAITD-KTKAIM--PVHYTGNIADMPALAKIAKKHNLHIVEDACQTILGRI-ND 169 (374)
T ss_dssp HTTCEE--EEECBC-TTSSBCGGGTGGGCCT-TEEEEC--CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEE-TT
T ss_pred HcCCEE--EEEecC-CCCCcCHHHHHHhCCC-CceEEE--EeCCcCCcCCHHHHHHHHHHcCCEEEEeCCCccCcee-CC
Confidence 223334 344555 6788999999999987 788877 445 799999999999999999999999999987652 22
Q ss_pred CCCCCCCccEEEecCC--ccCCC-CCceEEEEecCchhhccCCccchhhHHHHhhhccc-------CCCCCCCchHHHHH
Q 022463 180 IPSPFEYADVVTTTTH--KSLRG-PRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVF-------PGLQGGPHNHTITG 249 (297)
Q Consensus 180 ~~~~~~~~D~~~~s~~--K~l~g-p~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-------~~~~~t~~~~~~~a 249 (297)
... ....|++++|+| |++++ +.||+++++++. +.+.+..... .....+.+. .+.+
T Consensus 170 ~~~-~~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 234 (374)
T 3uwc_A 170 KFV-GSWGQFACFSLHPLKNLNVWSDAGVIITHSDE-------------YAEKLRLYRNHGLINRDVCVEYGINC-RMDT 234 (374)
T ss_dssp EET-TSSSSEEEEECSSSSSSCCSSCCEEEEESCHH-------------HHHHHHHHTBTTEEETTEESSCCCBC-BCCH
T ss_pred eec-cccccEEEEeCCCCCcCCccceeEEEEeCCHH-------------HHHHHHHHHhcCccccCccccccccC-CCCH
Confidence 211 013799999977 99977 456888877642 2111111100 000011111 2223
Q ss_pred HHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCC-cc
Q 022463 250 LAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSEN-IE 288 (297)
Q Consensus 250 l~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~-~~ 288 (297)
+.+++...... +++++.++.+++.+++.+.|++++. ++
T Consensus 235 ~~aa~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 273 (374)
T 3uwc_A 235 IQAVIANRLMN-QLETITEKRRGIAHLYDQSFVDLSEFID 273 (374)
T ss_dssp HHHHHHHHHGG-GHHHHHHHHHHHHHHHHHHTGGGTTTEE
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhccCCCeEE
Confidence 44445444445 7888999999999999999998876 44
No 78
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.86 E-value=8.4e-21 Score=176.70 Aligned_cols=237 Identities=10% Similarity=0.054 Sum_probs=156.9
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHh----cCCCC-----eEEEecCCCCCcccccccc
Q 022463 25 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTAL----LKPHD-----RIMALDLPHGGHLSHGYQT 94 (297)
Q Consensus 25 ~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~----~~~gd-----~Vl~~~~~~~~~~~~~~~~ 94 (297)
.+...++++++++++++++|++.. +++++|+ .++..++.++ .++|| +|+++...|+++....
T Consensus 102 ~~g~~~l~~~l~~~la~~~g~~~~-----~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~--- 173 (474)
T 1wyu_B 102 AQGALRLMWELGEYLKALTGMDAI-----TLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATA--- 173 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCSEE-----ECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHH---
T ss_pred ChHHHHHHHHHHHHHHHHHCCCce-----eecChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHHH---
Confidence 456678888888999999999752 5554554 5665444433 45887 9999998888876432
Q ss_pred cccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCCCCCc-ccHHHHHHHHHhcCCEEEEehhhhc
Q 022463 95 DTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASAYARL-YDYERIRKVCNKQKAIMLADMAHIS 172 (297)
Q Consensus 95 ~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~~G~~-~~~~~i~~la~~~g~~livD~a~~~ 172 (297)
...|..+..+ +.+ +++.+|+++|++++++ ++++|++ +++.+|.+ .|+++|.++|++||+++|+|++|+.
T Consensus 174 -----~~~G~~vv~v--~~~-~~~~~d~~~L~~~i~~-~t~~v~~~~pn~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~ 244 (474)
T 1wyu_B 174 -----SMAGYQVREI--PSG-PEGEVDLEALKRELGP-HVAALMLTNPNTLGLFERRILEISRLCKEAGVQLYYDGANLN 244 (474)
T ss_dssp -----HHTTCEEEEE--CBC-TTSSBCHHHHHHHCST-TEEEEEECSSCTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGG
T ss_pred -----HHCCCEEEEe--cCC-CCCCcCHHHHHHhhCC-CceEEEEECCCCCcccCCCHHHHHHHHHHcCCEEEEeCchhh
Confidence 2334334344 555 5688999999999987 8899888 55347887 7999999999999999999999977
Q ss_pred ccccccCCCCCCC-CccEEEecCCccCCCCC-----c-eEEEEecCchhhccC-----CccchhhHH-HHhhhcccCCCC
Q 022463 173 GLVAAGVIPSPFE-YADVVTTTTHKSLRGPR-----G-AMIFFRKGVKEINKQ-----GKEVFYDYE-EKINQAVFPGLQ 239 (297)
Q Consensus 173 g~~~~~~~~~~~~-~~D~~~~s~~K~l~gp~-----g-G~i~~~~~~~~~~~~-----g~~~~~~~~-~~~~~~~~~~~~ 239 (297)
+.... .. +.. ++|++++|+||+|++|. + |+++++++...++.. ++... .+. ...... .....
T Consensus 245 ~~~g~-~~--~~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~~~g~~~-~~~~~~~~~~-~~~~~ 319 (474)
T 1wyu_B 245 AIMGW-AR--PGDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVERGEEGF-YLDFDRPKSI-GRVRS 319 (474)
T ss_dssp GTTTT-CC--HHHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEECSSCE-EEECCCTTCC-CCSSS
T ss_pred hhccC-CC--cccCCCcEEEEeCccccccCCCCCCCCeEEEEEcHHHHHhCCCCeeeccCCee-EecccCcccC-ccccc
Confidence 66421 11 111 68999999999998774 4 899998864222110 00000 000 000000 00012
Q ss_pred CCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 240 GGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 240 ~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
++.+...+++....++.+... ++++..++...+++++.+.|++.
T Consensus 320 ~~~~~~~~~aa~~~l~~~g~~-~l~~~~~~~~~~~~~l~~~L~~~ 363 (474)
T 1wyu_B 320 FYGNFLALVRAWAYIRTLGLE-GLKKAAALAVLNARYLKELLKEK 363 (474)
T ss_dssp TTSCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcCcHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhc
Confidence 334544455545555544445 77778888999999999999876
No 79
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.86 E-value=2.1e-20 Score=169.93 Aligned_cols=218 Identities=17% Similarity=0.100 Sum_probs=146.2
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEecCCCCCcccccccc-cccccceee
Q 022463 25 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQT-DTKKISAVS 103 (297)
Q Consensus 25 ~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-~~~~~~~~g 103 (297)
++..++++ +++++++|.+. .+++++|+.++..++.+++++||+|+++..+|++....+... ...++
T Consensus 65 ~~~~~~l~----~~la~~~g~~~-----~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~---- 131 (392)
T 3qhx_A 65 NPTRTALE----AALAAVEDAAF-----GRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNV---- 131 (392)
T ss_dssp CHHHHHHH----HHHHHHTTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTC----
T ss_pred ChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCc----
Confidence 35555666 99999999873 377788888887788888999999999998888765443211 22222
Q ss_pred eeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCC
Q 022463 104 IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP 181 (297)
Q Consensus 104 ~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~ 181 (297)
.+ +.++.+ |++++++++++ +|++|++ +++| +|.+.|+++|.++|++||+++|+|++|+.+...... .
T Consensus 132 -~~--~~v~~~------d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~~~~~-~ 200 (392)
T 3qhx_A 132 -EY--TPVALA------DLDAVRAAIRP-TTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPALQQPL-S 200 (392)
T ss_dssp -EE--EEECTT------CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCCGG-G
T ss_pred -EE--EEeCCC------CHHHHHHhhCC-CCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCcccccCChH-H
Confidence 23 333332 89999999987 8999998 6777 799999999999999999999999999765322111 2
Q ss_pred CCCCCccEEEecCCccCCCCC---ceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHHHHHHHHh
Q 022463 182 SPFEYADVVTTTTHKSLRGPR---GAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVC 258 (297)
Q Consensus 182 ~~~~~~D~~~~s~~K~l~gp~---gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~ 258 (297)
. ++|++++|++|+++++. +|+++.+++ ++.+.+...... ...+.+....+.+..+++.
T Consensus 201 ~---~~di~~~S~sK~lg~~g~~~~G~v~~~~~-------------~~~~~l~~~~~~-~g~~~~~~~~~~~~~~l~~-- 261 (392)
T 3qhx_A 201 L---GADVVLHSTTKYIGGHSDVVGGALVTNDE-------------ELDQSFAFLQNG-AGAVPGPFDAYLTMRGLKT-- 261 (392)
T ss_dssp G---TCSEEEEETTTTTTCSSCCCCEEEEESCH-------------HHHHHHHHHHHH-HCCCCCHHHHHHHHHHHTT--
T ss_pred h---CCcEEEEcCccccCCCCCceEEEEEECcH-------------HHHHHHHHHHHh-cCCCCCHHHHHHHHhhhhH--
Confidence 2 78999999999998754 688888752 233333221110 0112233333333333332
Q ss_pred hhcChhhHHHHhhhhHHHHHhhccCCCCccc
Q 022463 259 TLITFSHIHVFSLHVYPAFVSNQNNSENIEE 289 (297)
Q Consensus 259 ~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~ 289 (297)
++...++..+.++++.+.|++.+.++.
T Consensus 262 ----l~~~~~~~~~~~~~l~~~L~~~~~v~~ 288 (392)
T 3qhx_A 262 ----LVLRMQRHSENAAAVAEFLAEHPAIST 288 (392)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHTCTTEEE
T ss_pred ----HHHHHHHHHHHHHHHHHHHhcCCCcce
Confidence 333445556666677777777776554
No 80
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.86 E-value=1.1e-21 Score=175.98 Aligned_cols=231 Identities=10% Similarity=0.042 Sum_probs=155.1
Q ss_pred hHHHHHHHHHHHHHHHcCCCCC-CCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeee
Q 022463 27 YIDMAESLCQKRALEAFRLDPE-KWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 104 (297)
Q Consensus 27 ~~~~~e~~~~~~la~~~g~~~~-~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 104 (297)
...++.+++++++++++|++++ + .+++++|+ .++..++.++++|||+|+++...+.+.. +. ..+...|
T Consensus 46 ~~~~~~~~~~~~la~~~g~~~~~~---~i~~t~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~--~~----~~~~~~g- 115 (362)
T 2c0r_A 46 VYEAVHNEAQARLLALLGNPTGYK---VLFIQGGASTQFAMIPMNFLKEGQTANYVMTGSWASK--AL----KEAKLIG- 115 (362)
T ss_dssp HHHHHHHHHHHHHHHHTTCCSSEE---EEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHH--HH----HHHHHHS-
T ss_pred HHHHHHHHHHHHHHHHhCCCCCcE---EEEECCCchHHHHHHHHhcCCCCCeEEEEecCcHhHH--HH----HHHHHhC-
Confidence 3456677888999999999753 3 24676666 5777788899999999998764433321 10 0122234
Q ss_pred eeEeeecccCC-CCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCc-ccHHHHHHHHHhcCCEEEEehhhhcccccccCC
Q 022463 105 FFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVA-GASA-YARL-YDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180 (297)
Q Consensus 105 ~~~~v~~~~~~-~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~-~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~ 180 (297)
.+..++++.+. ....+|+++++ +++ +|++|++ +++| +|.. .|+++| +|+++++|++|+.+..+.++.
T Consensus 116 ~~~~v~~~~~~~~~~~~~~~~~~--i~~-~t~~v~~~~~~n~tG~~~~~l~~i------~~~~vivD~a~~~~~~~~~~~ 186 (362)
T 2c0r_A 116 DTHVAASSEASNYMTLPKLQEIQ--LQD-NAAYLHLTSNETIEGAQFKAFPDT------GSVPLIGDMSSDILSRPFDLN 186 (362)
T ss_dssp CEEEEEECGGGTTCSCCCGGGCC--CCT-TEEEEEEESEETTTTEECSSCCCC------TTSCEEEECTTTTTSSCCCGG
T ss_pred CeEEEecccccccccCCCHHHcc--cCC-CcCEEEEeCCcCccceeccccccc------CCCEEEEEChhhccCCccchh
Confidence 45555543211 12235666554 565 8898888 5666 7874 678776 899999999999887765432
Q ss_pred CCCCCCccEEEecCCccCCCCCc-eEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHHHHHHHHhh
Q 022463 181 PSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 259 (297)
Q Consensus 181 ~~~~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~ 259 (297)
..|++++|+||++ ||.| |+++++++...++........++..... .....++++...++++.+|++.+.+
T Consensus 187 -----~~d~~~~s~~K~~-g~~G~G~l~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~t~~~~~~~a~~~al~~~~~ 257 (362)
T 2c0r_A 187 -----QFGLVYAGAQKNL-GPSGVTVVIVREDLVAESPKHLPTMLRYDTYVK---NNSLYNTPPSFGIYMVNEVLKWIEE 257 (362)
T ss_dssp -----GCSEEEEETTTTT-CCSSCEEEEEEGGGSSSCCTTSCGGGCHHHHHH---TTTCSSCCCHHHHHHHHHHHHHHHH
T ss_pred -----HCcEEEEeccccc-cCcCcEEEEEcHHHHhhccccCchHHhHHHHhh---ccCcCCCchHHHHHHHHHHHHHHHH
Confidence 3499999999998 6888 9999988653221110000001111001 1122568888999999999998765
Q ss_pred hcChhhHHHHhhhhHHHHHhhccCCC
Q 022463 260 LITFSHIHVFSLHVYPAFVSNQNNSE 285 (297)
Q Consensus 260 ~~g~~~~~~~~~~l~~~l~~~l~~~~ 285 (297)
..++++++++.+++++++.+.|++++
T Consensus 258 ~~~~~~~~~~~~~~~~~l~~~L~~~~ 283 (362)
T 2c0r_A 258 RGGLEGVQQANRKKASLIYDAIDQSG 283 (362)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHTST
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 43689999999999999999999886
No 81
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.86 E-value=3.5e-21 Score=173.27 Aligned_cols=219 Identities=16% Similarity=0.157 Sum_probs=150.0
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHh-cCCCCeEEEecCCCCCccccccccccccccee
Q 022463 24 GNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAV 102 (297)
Q Consensus 24 ~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~ 102 (297)
..+...++| +.+++++|.+. .+++++|+.++..++.++ +++||+|+++..+|.+...... ..
T Consensus 33 ~~~~~~~l~----~~la~~~~~~~-----~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~~~~~~~~~~--------~~ 95 (367)
T 3nyt_A 33 LGPEVTELE----DRLADFVGAKY-----CISCANGTDALQIVQMALGVGPGDEVITPGFTYVATAETVA--------LL 95 (367)
T ss_dssp SCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHH--------HT
T ss_pred CChHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHHHH--------Hc
Confidence 456677777 88999999873 366777778888788888 8999999999988888755432 22
Q ss_pred eeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEEcCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCC
Q 022463 103 SIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP 181 (297)
Q Consensus 103 g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~ 181 (297)
|. ++++++.+++++.+|++++++++++ ++++|++ +| +|...|+++|.++|+++|+++|+|++|+.|....+...
T Consensus 96 G~--~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~--~~~~G~~~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~~~ 170 (367)
T 3nyt_A 96 GA--KPVYVDIDPRTYNLDPQLLEAAITP-RTKAIIP--VSLYGQCADFDAINAIASKYGIPVIEDAAQSFGASYKGKRS 170 (367)
T ss_dssp TC--EEEEECBCTTTCSBCGGGTGGGCCT-TEEEECC--BCGGGCCCCHHHHHHHHHHTTCCBEEECTTTTTCEETTEET
T ss_pred CC--EEEEEecCCccCCcCHHHHHHhcCc-CCcEEEe--eCCccChhhHHHHHHHHHHcCCEEEEECccccCCeECCeec
Confidence 32 3344566756689999999999987 8888874 34 79999999999999999999999999998776322211
Q ss_pred CCCCCccEEEecC--CccCCC-CCceEEEEecCchhhccCCccchhhHHHHhhhccc-----------CCCCCCCchHHH
Q 022463 182 SPFEYADVVTTTT--HKSLRG-PRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVF-----------PGLQGGPHNHTI 247 (297)
Q Consensus 182 ~~~~~~D~~~~s~--~K~l~g-p~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-----------~~~~~t~~~~~~ 247 (297)
.. ..|++++|+ +|++++ +.||+++++++ ++.+.+..... .+.....+....
T Consensus 171 ~~--~~di~~~Sf~~~K~l~~~g~gg~~~~~~~-------------~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~a 235 (367)
T 3nyt_A 171 CN--LSTVACTSFFPSAPLGCYGDGGAIFTNDD-------------ELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQA 235 (367)
T ss_dssp TS--SSSEEEEECCTTSSSCCSSCCEEEEESCH-------------HHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHH
T ss_pred cC--CCCEEEEECCCCCcCCCcCceeEEEeCCH-------------HHHHHHHHHHhcCCCcCceeeccCcCCCccHHHH
Confidence 11 129999985 899977 45688888653 12222211110 111122222222
Q ss_pred HHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCC
Q 022463 248 TGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSE 285 (297)
Q Consensus 248 ~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~ 285 (297)
+. ++..+. .++...++.+++.+++.+.|++.+
T Consensus 236 a~---~~~~l~---~~~~~~~~~~~~~~~~~~~L~~~~ 267 (367)
T 3nyt_A 236 AI---LLPKLE---IFEEEIALRQKVAAEYDLSLKQVG 267 (367)
T ss_dssp HH---HHHHHH---THHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HH---HHHHHH---HHHHHHHHHHHHHHHHHHHhccCC
Confidence 22 222232 456677888888889988888774
No 82
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.85 E-value=1e-20 Score=172.17 Aligned_cols=160 Identities=16% Similarity=0.171 Sum_probs=122.5
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeee
Q 022463 26 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 105 (297)
Q Consensus 26 ~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 105 (297)
+...+++ +++++++|++ + .+++++|+.++..++.+++++||+|+++..+|++....+... ....|..
T Consensus 64 ~~~~~l~----~~la~~~g~~-~----~i~~~sG~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~----~~~~g~~ 130 (398)
T 2rfv_A 64 PTTDALE----KKLAVLERGE-A----GLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHS----MPKFGIN 130 (398)
T ss_dssp HHHHHHH----HHHHHHHTCS-E----EEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTH----HHHTTCE
T ss_pred hHHHHHH----HHHHHHhCCC-c----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHH----HHHcCCE
Confidence 4445555 9999999987 2 488899998887788888999999999998888776543211 0122322
Q ss_pred eEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCCCC
Q 022463 106 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 183 (297)
Q Consensus 106 ~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~~~ 183 (297)
+..+ +.+ |++++++.+++ +|++|++ +++| +|.+.|+++|.++|++||+++|+|++|+.+...... ..
T Consensus 131 ~~~v--~~~------d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~-~~- 199 (398)
T 2rfv_A 131 VRFV--DAA------KPEEIRAAMRP-ETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQQPL-QL- 199 (398)
T ss_dssp EEEE--CTT------SHHHHHHHCCT-TEEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGG-GG-
T ss_pred EEEe--CCC------CHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCch-hh-
Confidence 3333 332 89999999987 8999988 6777 799999999999999999999999999877654221 11
Q ss_pred CCCccEEEecCCccCCCCCc---eEEEEecC
Q 022463 184 FEYADVVTTTTHKSLRGPRG---AMIFFRKG 211 (297)
Q Consensus 184 ~~~~D~~~~s~~K~l~gp~g---G~i~~~~~ 211 (297)
++|++++|+||++++|.+ |+++++++
T Consensus 200 --~~di~~~s~sK~~~~~g~~~~G~~~~~~~ 228 (398)
T 2rfv_A 200 --GADIVVHSVTKYINGHGDVIGGIIVGKQE 228 (398)
T ss_dssp --TCSEEEEETTTTTTCSSCCCCEEEEECHH
T ss_pred --CCcEEEEeCcccccCCCCceEEEEEECHH
Confidence 689999999999988764 88888774
No 83
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.85 E-value=1e-21 Score=177.51 Aligned_cols=233 Identities=12% Similarity=0.102 Sum_probs=163.2
Q ss_pred HHHHHHHHHHcCCCCCCCcceEEecCChH-HHHHHHHHhcCC----CCeEEEecCCCCCcccccccccccccceeeeeeE
Q 022463 33 SLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKP----HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFE 107 (297)
Q Consensus 33 ~~~~~~la~~~g~~~~~~~~~v~~~sG~~-~~~~~~~~~~~~----gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 107 (297)
..+.++++.+ |.+... ..++++|++ ++++++.+.+++ +|.||++...|.|.+.. +.+.|...+
T Consensus 120 ~l~ld~L~~~-G~~~~~---~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kA--------liL~Gl~Pv 187 (501)
T 3hl2_A 120 SLVLDIIKLA-GVHTVA---NCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKS--------MITAGFEPV 187 (501)
T ss_dssp HHHHHHHHHT-TCTTCC---EEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHH--------HHHTTCEEE
T ss_pred HHHHHHHHHc-CCCCCC---cEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHH--------HHHcCCeEE
Confidence 3477778766 887542 366667775 566566666553 49999999999888664 445555555
Q ss_pred eeecccCCCCCcCCHHHHHHHhhhcCCc--EEEE-cCCCCC--CcccHHHHHHHHHhcCCEEEEehhhhcccccccC-CC
Q 022463 108 TMPYRLNESTGYIDYDQLEKSATLFRPK--LIVA-GASAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV-IP 181 (297)
Q Consensus 108 ~v~~~~~~~~~~~d~~~l~~~l~~~~~~--~v~~-~~~~~G--~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~-~~ 181 (297)
.++..++++...+|+++++++|+++.++ ++++ ++++|+ .+.|+++|.++|++||++++||+||.+....... ..
T Consensus 188 ~V~p~~d~~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~ 267 (501)
T 3hl2_A 188 VIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQ 267 (501)
T ss_dssp EECEEEETTEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHH
T ss_pred EEeeeecccccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHH
Confidence 5554455456789999999999875332 3333 555664 6799999999999999999999998776533211 11
Q ss_pred CCCC-C-ccEEEecCCccCCCCCceEEE-EecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHHHHHHHHh
Q 022463 182 SPFE-Y-ADVVTTTTHKSLRGPRGAMIF-FRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVC 258 (297)
Q Consensus 182 ~~~~-~-~D~~~~s~~K~l~gp~gG~i~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~ 258 (297)
..+. + +|+++.|+||++..|.||.++ .+++ ++.+.+... +|++. +....+.+..++..+.
T Consensus 268 sA~~~GrAD~vVqS~HK~llvpIGG~ii~~~d~-------------e~l~~~~~~-yPGr~---S~Spsldl~~tLL~lG 330 (501)
T 3hl2_A 268 QGARVGRIDAFVQSLDKNFMVPVGGAIIAGFND-------------SFIQEISKM-YPGRA---SASPSLDVLITLLSLG 330 (501)
T ss_dssp HHHHHSCCCEEEEEHHHHHCCCSSCEEEEESCH-------------HHHHHHHHT-SCSCB---CSHHHHHHHHHHHHHH
T ss_pred HHHhcCCCcEEEecccccceeecCceEEEeCCH-------------HHHHHHHHh-CCCCC---CCcHHHHHHHHHHHHH
Confidence 1111 5 999999999999999886554 5553 455555433 44443 3344455667788888
Q ss_pred hhcChhhHHHHhhhhHHHHHhhccCCCC-----cccccCCCC
Q 022463 259 TLITFSHIHVFSLHVYPAFVSNQNNSEN-----IEEDKGRPC 295 (297)
Q Consensus 259 ~~~g~~~~~~~~~~l~~~l~~~l~~~~~-----~~~~~g~~~ 295 (297)
.. |+.++.++..+++++|.++|+++.. +-+.+++||
T Consensus 331 r~-Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~~~~n~i 371 (501)
T 3hl2_A 331 SN-GYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTPHNPI 371 (501)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCCCTTCSS
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCCCCCce
Confidence 88 9999999999999999999999643 334556665
No 84
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.85 E-value=7.5e-21 Score=171.88 Aligned_cols=232 Identities=12% Similarity=0.115 Sum_probs=159.6
Q ss_pred HHHHHHHHHHHHHHHcC--CCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeee
Q 022463 28 IDMAESLCQKRALEAFR--LDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 104 (297)
Q Consensus 28 ~~~~e~~~~~~la~~~g--~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 104 (297)
..++++.+++++++.+| +++++ +++++|+ .++..++.+++++||+|+++...|.+...... ..|.
T Consensus 69 ~~~~~~~l~~~l~~~~g~~~~~~~----v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~--------~~g~ 136 (391)
T 4dq6_A 69 PDSYNESIVNWLYRRHNWKIKSEW----LIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVK--------NNNR 136 (391)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGG----EEEESCHHHHHHHHHHHHSCTTCEEEECSSCCTHHHHHHH--------HTTC
T ss_pred CHHHHHHHHHHHHHHhCCCCcHHH----eEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCHHHHHHHH--------HcCC
Confidence 46778888899999999 55654 8888887 47767888889999999999887777644222 2333
Q ss_pred eeEeeecc-cCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCc---ccHHHHHHHHHhcCCEEEEehhhhccccccc
Q 022463 105 FFETMPYR-LNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARL---YDYERIRKVCNKQKAIMLADMAHISGLVAAG 178 (297)
Q Consensus 105 ~~~~v~~~-~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~---~~~~~i~~la~~~g~~livD~a~~~g~~~~~ 178 (297)
.+..++++ .++.++.+|++++++++++ +++|++ +++| +|.+ .++++|.++|++||+++|+|++|+.......
T Consensus 137 ~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~ 214 (391)
T 4dq6_A 137 ELIISPLQKLENGNYIMDYEDIENKIKD--VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKH 214 (391)
T ss_dssp EEEECCCEECTTSCEECCHHHHHHHCTT--EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTC
T ss_pred eEEeeeeeecCCCceEeeHHHHHHHhhc--CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCC
Confidence 34444433 2234567999999999986 888877 7777 7877 5678899999999999999999876433211
Q ss_pred CCCCCCC--C-----ccEEEecCCccCC--CCCceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHH
Q 022463 179 VIPSPFE--Y-----ADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITG 249 (297)
Q Consensus 179 ~~~~~~~--~-----~D~~~~s~~K~l~--gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a 249 (297)
...++. . ..+++.|++|+++ |.+.|+++++++ ++.+.+.........++++.+..++
T Consensus 215 -~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~a 280 (391)
T 4dq6_A 215 -KHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDE-------------KDYKLLDDAFTRIDIKRNNCFSLVA 280 (391)
T ss_dssp -CCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSH-------------HHHHHHHHHHHHTTCCCCCHHHHHH
T ss_pred -CccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCH-------------HHHHHHHHHHHhhcCCCCCHHHHHH
Confidence 111111 1 2288999999874 333488888762 2333333322222244667777777
Q ss_pred HHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccC-CCCccc
Q 022463 250 LAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNN-SENIEE 289 (297)
Q Consensus 250 l~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~-~~~~~~ 289 (297)
+.++++.. +. .+++++++.+++.+++.+.|++ ++.++-
T Consensus 281 ~~~~l~~~-~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 319 (391)
T 4dq6_A 281 TEASYNNG-ES-WLESFLEYLESNIDFAIKYINENMPKLKV 319 (391)
T ss_dssp HHHHHHHC-HH-HHHHHHHHHHHHHHHHHHHHHHHCTTSEE
T ss_pred HHHHHhch-HH-HHHHHHHHHHHHHHHHHHHHHhhCCCCEe
Confidence 77777753 23 4678888888999999998887 566543
No 85
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.85 E-value=6e-21 Score=174.85 Aligned_cols=236 Identities=11% Similarity=0.081 Sum_probs=163.9
Q ss_pred HHHHHHHHHHHHHHcC--CCCCCCcceEEecCChH-HHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeee
Q 022463 29 DMAESLCQKRALEAFR--LDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 105 (297)
Q Consensus 29 ~~~e~~~~~~la~~~g--~~~~~~~~~v~~~sG~~-~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 105 (297)
.++++.+++++++.++ +++++ |++++|++ ++..++++++++||+|++....|+++.... ...|..
T Consensus 99 ~~l~~~l~~~l~~~~g~~~~~~~----v~~~~g~~ea~~~a~~~~~~~gd~Vi~~~~~y~~~~~~~--------~~~g~~ 166 (421)
T 3l8a_A 99 DDLYQAVIDWERKEHDYAVVKED----ILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTI--------RLNDHR 166 (421)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGGG----EEEESCHHHHHHHHHHHHSCTEEEEEEEESCCHHHHHHH--------HHTTEE
T ss_pred HHHHHHHHHHHHHHhCCCCCHHH----EEEcCCHHHHHHHHHHHhcCCCCEEEECCCCcHHHHHHH--------HHCCCE
Confidence 6777788899999988 45543 88888885 888888999999999999998777654322 223333
Q ss_pred eEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCc---ccHHHHHHHHHhcCCEEEEehhhhcccccc---
Q 022463 106 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARL---YDYERIRKVCNKQKAIMLADMAHISGLVAA--- 177 (297)
Q Consensus 106 ~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~---~~~~~i~~la~~~g~~livD~a~~~g~~~~--- 177 (297)
+..+++.....++.+|+++|++++++.++++|++ +++| +|.+ .++++|.++|++||+++|+|++|+......
T Consensus 167 ~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~ 246 (421)
T 3l8a_A 167 LVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTH 246 (421)
T ss_dssp EEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCC
T ss_pred EEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCC
Confidence 4445443222456789999999998448999888 6777 7876 578899999999999999999987533221
Q ss_pred -cCCCCC--CCCccEEEecCCccCC--CCCceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHHH
Q 022463 178 -GVIPSP--FEYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAV 252 (297)
Q Consensus 178 -~~~~~~--~~~~D~~~~s~~K~l~--gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~ 252 (297)
.+.... ..+.++++.|++|+++ |.+.|+++++++ ++.+.+.........++++.+..+++.+
T Consensus 247 ~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~-------------~l~~~~~~~~~~~~~~~~n~~~~~a~~a 313 (421)
T 3l8a_A 247 HSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNE-------------SLRRKFQYRQLANNQHEVPTVGMIATQA 313 (421)
T ss_dssp CCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSH-------------HHHHHHHHHHHHTTCSCCCHHHHHHHHH
T ss_pred ccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCH-------------HHHHHHHHHHHhcccCCCCHHHHHHHHH
Confidence 111110 0134588899999884 233388888732 3344333322122244677788888888
Q ss_pred HHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCccccc
Q 022463 253 ALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIEEDK 291 (297)
Q Consensus 253 al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~~~ 291 (297)
+++.. +. .++++.++.+++.+++.+.|++.+.++..+
T Consensus 314 al~~~-~~-~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~ 350 (421)
T 3l8a_A 314 AFQYG-KP-WLEELKTVIEGNIKLVIKELEAKTKIKVME 350 (421)
T ss_dssp HHHHC-HH-HHHHHHHHHHHHHHHHHHHHHHHCSCEEEC
T ss_pred HHhcc-HH-HHHHHHHHHHHHHHHHHHHHHhCCCceEeC
Confidence 88753 23 578888889999999999988776665443
No 86
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.85 E-value=2.5e-21 Score=176.78 Aligned_cols=231 Identities=9% Similarity=0.064 Sum_probs=155.7
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChH-HHHHHHHHhcC----CCCeEEEecCCCCCcccccccccccccc
Q 022463 26 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK----PHDRIMALDLPHGGHLSHGYQTDTKKIS 100 (297)
Q Consensus 26 ~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~-~~~~~~~~~~~----~gd~Vl~~~~~~~~~~~~~~~~~~~~~~ 100 (297)
+....+++.+..++.+++|.+... ..++++|++ ..++++.+.++ +++.|+++...|.|+.... .
T Consensus 94 ~~~~~~e~~~~~~~~~~lGlp~~~---~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl--------~ 162 (450)
T 3bc8_A 94 SLLNKITNSLVLNVIKLAGVHSVA---SCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSM--------V 162 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCC---EEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHH--------H
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCc---eEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHH--------H
Confidence 446678888889999999997653 345555553 33334444434 3899999998888886543 3
Q ss_pred eeeeeeEeeecccCCCCCcCCHHHHHHHhhhcC--CcEEEE-cCCCCC--CcccHHHHHHHHHhcCCEEEEehhhhcccc
Q 022463 101 AVSIFFETMPYRLNESTGYIDYDQLEKSATLFR--PKLIVA-GASAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLV 175 (297)
Q Consensus 101 ~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~--~~~v~~-~~~~~G--~~~~~~~i~~la~~~g~~livD~a~~~g~~ 175 (297)
+.|...+.+....+++.+.+|++.|+++|+++. ..++++ +++++| .+.|+++|.++|++||+++|||+||.+...
T Consensus 163 l~Gl~p~~v~~~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~ 242 (450)
T 3bc8_A 163 TAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSS 242 (450)
T ss_dssp HTTCEEEEECCEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCH
T ss_pred HcCCeeEEEEeeecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhh
Confidence 445444444333333578999999999998743 234444 677776 889999999999999999999999876443
Q ss_pred ccc-CCCCCC--CCccEEEecCCccCCCCCc-eEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHH
Q 022463 176 AAG-VIPSPF--EYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLA 251 (297)
Q Consensus 176 ~~~-~~~~~~--~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~ 251 (297)
... +....+ .++|+++.|+|||+..|.+ ++++++++ +..+.+... +++..++.+ + ..++
T Consensus 243 ~~~~l~~~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~-------------~~~~~~~~~-~~g~~s~Sp--s-L~l~ 305 (450)
T 3bc8_A 243 KCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNE-------------PFIQDISKM-YPGRASASP--S-LDVL 305 (450)
T ss_dssp HHHHHHHHHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCH-------------HHHHHHHHH-SCSCBCSHH--H-HHHH
T ss_pred hhHhHHHHHhcccCCCEEEECCccCCCchhccEEEEecCH-------------HHHHHHHHH-hhcCCcccH--H-HHHH
Confidence 221 110111 2799999999999999999 55665543 333334333 333322222 2 3445
Q ss_pred HHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCC
Q 022463 252 VALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSE 285 (297)
Q Consensus 252 ~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~ 285 (297)
.++..+... ++.+..+++.++++++.+.|++++
T Consensus 306 ~~l~~~G~~-g~~~~i~~~~~~a~~l~~~l~~~~ 338 (450)
T 3bc8_A 306 ITLLSLGCS-GYRKLLKERKEMFVYLSTQLKKLA 338 (450)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhH
Confidence 556566555 888888888999999999998777
No 87
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.85 E-value=1.3e-20 Score=171.04 Aligned_cols=234 Identities=11% Similarity=0.080 Sum_probs=157.8
Q ss_pred HHHHHHHHHHHHHHHcC--CCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeee
Q 022463 28 IDMAESLCQKRALEAFR--LDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 104 (297)
Q Consensus 28 ~~~~e~~~~~~la~~~g--~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 104 (297)
..++++.+.+++++.+| ++++ .+++++|+ .++..++.+++++||+|+++...|++..... ...|.
T Consensus 68 ~~~l~~~la~~l~~~~g~~~~~~----~v~~t~g~~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~--------~~~g~ 135 (399)
T 1c7n_A 68 TEEYKKTVKKWMKDRHQWDIQTD----WIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAI--------KNQER 135 (399)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGG----GEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHH--------HTTTC
T ss_pred cHHHHHHHHHHHHHHhCCCCChh----hEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHHH--------HHcCC
Confidence 57788777677777778 4554 38888887 5777788888999999999987777764322 22233
Q ss_pred eeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCEEEEehhhhcccccccC
Q 022463 105 FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGV 179 (297)
Q Consensus 105 ~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~livD~a~~~g~~~~~~ 179 (297)
.+..++.+.+..++.+|++++++.+++.++++|++ +++| +|.+.| +++|.++|++||+++|+|++|+.......
T Consensus 136 ~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~- 214 (399)
T 1c7n_A 136 KIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGY- 214 (399)
T ss_dssp EEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTC-
T ss_pred EEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC-
Confidence 33333322111134689999999998437888888 6777 798888 88999999999999999999986432211
Q ss_pred CCCCC-------CCccEEEecCCccCCCC--CceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHH
Q 022463 180 IPSPF-------EYADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGL 250 (297)
Q Consensus 180 ~~~~~-------~~~D~~~~s~~K~l~gp--~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al 250 (297)
...++ .+.++++.|++|+++.| +.|+++++++ ++.+.+.....+...++++.+..+++
T Consensus 215 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-------------~~~~~l~~~~~~~~~~~~~~~~~~a~ 281 (399)
T 1c7n_A 215 EHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNP-------------DIRERFTKSRDATSGMPFTTLGYKAC 281 (399)
T ss_dssp CCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCH-------------HHHHHHHHHHHHTTCCCCCHHHHHHH
T ss_pred CcccHHHcCccccCcEEEEEeChhhccccchheEEEEECCH-------------HHHHHHHHHHhhcccCCCCHHHHHHH
Confidence 01111 13458889999987423 3499998752 23333333222222335666777777
Q ss_pred HHHHHHHhhhcChhhHHHHhhhhHHHHHhhccC-CCCccc
Q 022463 251 AVALKQVCTLITFSHIHVFSLHVYPAFVSNQNN-SENIEE 289 (297)
Q Consensus 251 ~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~-~~~~~~ 289 (297)
.++++.. .. .+++++++.+++.+++.+.|++ ++.++.
T Consensus 282 ~~~l~~~-~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 319 (399)
T 1c7n_A 282 EICYKEC-GK-WLDGCIKVIDKNQRIVKDFFEVNHPEIKA 319 (399)
T ss_dssp HHHHHHC-HH-HHHHHHHHHHHHHHHHHHHHHHHCTTSBC
T ss_pred HHHHhCC-hH-HHHHHHHHHHHHHHHHHHHHHhhCCCCeE
Confidence 7777643 23 5778888888999999999887 666543
No 88
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.85 E-value=4.1e-20 Score=167.17 Aligned_cols=235 Identities=12% Similarity=0.021 Sum_probs=157.7
Q ss_pred CCCchhHHHHHHHHHHHHHHHcCC--CCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccc
Q 022463 22 YGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKK 98 (297)
Q Consensus 22 ~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~ 98 (297)
|+......++++.+.+++.+.+|+ +++ .+++++|+ .++..++++++++||+|+++..+|++.....
T Consensus 63 y~~~~g~~~l~~~la~~~~~~~g~~~~~~----~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~------- 131 (388)
T 1j32_A 63 YGPAAGEPRLREAIAQKLQRDNGLCYGAD----NILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMV------- 131 (388)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCCCCGG----GEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHH-------
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCCChh----hEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH-------
Confidence 444455688887777888777775 344 38888886 5777788888999999999998887764322
Q ss_pred cceeeeeeEeeecccCC-CCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCEEEEehhhhc
Q 022463 99 ISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYD---YERIRKVCNKQKAIMLADMAHIS 172 (297)
Q Consensus 99 ~~~~g~~~~~v~~~~~~-~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~livD~a~~~ 172 (297)
...|..+..+ +.++ +++.+|++++++.+++ ++++|++ +++| +|.+.| +++|.++|++||+++|+|++|+.
T Consensus 132 -~~~g~~~~~v--~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 207 (388)
T 1j32_A 132 -KLAEGTPVIL--PTTVETQFKVSPEQIRQAITP-KTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEK 207 (388)
T ss_dssp -HHTTCEEEEE--CCCGGGTTCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred -HHcCCEEEEe--cCCcccCCCCCHHHHHHhcCc-CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchh
Confidence 2233334344 4442 2467899999999987 8888888 6777 787754 88999999999999999999876
Q ss_pred ccccccCCC--CCC----CCccEEEecCCccCCCCC--ceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCch
Q 022463 173 GLVAAGVIP--SPF----EYADVVTTTTHKSLRGPR--GAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHN 244 (297)
Q Consensus 173 g~~~~~~~~--~~~----~~~D~~~~s~~K~l~gp~--gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~ 244 (297)
......... ..+ .+.|+++.|+||+++.|. .|+++++++ +.+.+....... ..+++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~--------------~~~~l~~~~~~~-~~~~~~ 272 (388)
T 1j32_A 208 ILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVP--------------LVKAATKIQGHS-TSNVCT 272 (388)
T ss_dssp CBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCHH--------------HHHHHHHHHHTT-TCSCCH
T ss_pred cccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEEeCHH--------------HHHHHHHHHhhc-ccCCCH
Confidence 443211000 001 146899999999984232 499998773 333333222111 122344
Q ss_pred HHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 245 HTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 245 ~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
....++.++|+.. +. .+++++++.+++.+++.+.|++++.++
T Consensus 273 ~~~~a~~~~l~~~-~~-~~~~~~~~~~~~~~~l~~~L~~~~g~~ 314 (388)
T 1j32_A 273 FAQYGAIAAYENS-QD-CVQEMLAAFAERRRYMLDALNAMPGLE 314 (388)
T ss_dssp HHHHHHHHHHHSC-SH-HHHHHHHHHHHHHHHHHHHHHTCTTCB
T ss_pred HHHHHHHHHHhCC-cH-HHHHHHHHHHHHHHHHHHHHhhCCCCc
Confidence 4444445555422 22 467788888899999999998876654
No 89
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.85 E-value=1.2e-20 Score=169.54 Aligned_cols=221 Identities=14% Similarity=0.099 Sum_probs=144.2
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHh---cCCCCeEEEecCCCCCcccccccccccccce
Q 022463 26 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTAL---LKPHDRIMALDLPHGGHLSHGYQTDTKKISA 101 (297)
Q Consensus 26 ~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~---~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~ 101 (297)
+...+++ +.+++++|++ + +++++|+ .++..++.++ +++||+|+++..+|++....+. .
T Consensus 32 ~~~~~l~----~~la~~~~~~--~----v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~--------~ 93 (375)
T 2fnu_A 32 KRSLLFE----EALCEFLGVK--H----ALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVATANMLL--------E 93 (375)
T ss_dssp HHHHHHH----HHHHHHHTCS--E----EEEESCHHHHHHHHHHHSSCCCTTSCEEEECSSSCTHHHHHHH--------H
T ss_pred hHHHHHH----HHHHHHhCCC--e----EEEeCCHHHHHHHHHHHhcccCCCCCEEEECCCccHhHHHHHH--------H
Confidence 4455666 8899999987 2 5665555 6777788888 8999999999988888765433 2
Q ss_pred eeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCCCCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCC
Q 022463 102 VSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180 (297)
Q Consensus 102 ~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~ 180 (297)
.|..+ +.++.++ ++.+|++++++.+++ ++++|++ ++ +|.+.|+++|.++|++||+++|+|++|+.+..+.+..
T Consensus 94 ~g~~~--~~~~~~~-~~~~d~~~l~~~i~~-~~~~v~~~~~--tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~ 167 (375)
T 2fnu_A 94 SGYTP--VFAGIKN-DGNIDELALEKLINE-RTKAIVSVDY--AGKSVEVESVQKLCKKHSLSFLSDSSHALGSEYQNKK 167 (375)
T ss_dssp TTCEE--EECCBCT-TSSBCGGGSGGGCCT-TEEEEEEECG--GGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEE
T ss_pred CCCEE--EEeccCC-CCCCCHHHHHhhcCc-CceEEEEeCC--cCCccCHHHHHHHHHHcCCEEEEECccccCCeECCee
Confidence 23223 4445553 347999999999987 7888777 44 8999999999999999999999999999887653311
Q ss_pred CCCCCCccEEEecCCccCCCCCc-eEEEEecCchhhccCCccchhhHHHHhhhccc-------C-----CCCCCC-chHH
Q 022463 181 PSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVF-------P-----GLQGGP-HNHT 246 (297)
Q Consensus 181 ~~~~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-------~-----~~~~t~-~~~~ 246 (297)
...+..+++.++|.||++ +| | |++++.++. ++.+.+..... + ...+.. ....
T Consensus 168 ~~~~~~i~~~s~s~~K~~-~~-g~g~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (375)
T 2fnu_A 168 VGGFALASVFSFHAIKPI-TT-AEGGAVVTNDS------------ELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNE 233 (375)
T ss_dssp TTSSSSEEEEECCTTSSS-CC-SSCEEEEESCH------------HHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCH
T ss_pred ccccCCeEEEeCCCCCCc-cc-cCceEEEeCCH------------HHHHHHHHHHhcCCccccccccccccccccCCCCH
Confidence 111112444455556988 66 6 777774311 12222211100 0 001111 1112
Q ss_pred HHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 247 ITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 247 ~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
+ .+++...... +++++.++.+++.+++.+.|++++.++
T Consensus 234 ~---~~a~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~ 271 (375)
T 2fnu_A 234 I---QSALGLSQLK-KAPFLMQKREEAALTYDRIFKDNPYFT 271 (375)
T ss_dssp H---HHHHHHHHHT-THHHHHHHHHHHHHHHHHHHTTCSSEE
T ss_pred H---HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhcCCCcc
Confidence 2 2222222234 788899999999999999999987643
No 90
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.84 E-value=6.5e-20 Score=166.81 Aligned_cols=222 Identities=14% Similarity=0.089 Sum_probs=151.3
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHh-cCCCCeEEEecCCCCCcccccccccccccceee
Q 022463 25 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS 103 (297)
Q Consensus 25 ~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 103 (297)
.+...+++ +.++++++.+. .+++++|+.++..++.++ +++||+|+++..+|++...... ..|
T Consensus 62 ~~~~~~l~----~~la~~~~~~~-----~v~~~~Gt~a~~~~l~~~~~~~gd~vl~~~~~~~~~~~~~~--------~~g 124 (399)
T 2oga_A 62 GPELEGFE----AEFAAYCETDH-----AVGVNSGMDALQLALRGLGIGPGDEVIVPSHTYIASWLAVS--------ATG 124 (399)
T ss_dssp SHHHHHHH----HHHHHHTTSSE-----EEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHH--------HTT
T ss_pred chhHHHHH----HHHHHHHCCCe-----EEEecCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHHHH--------HCC
Confidence 35566666 88999999873 377788887887788888 8999999999988877644322 223
Q ss_pred eeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCCCC
Q 022463 104 IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 183 (297)
Q Consensus 104 ~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~~~ 183 (297)
..+ +.++.+++++.+|++++++.+++ ++++|+++ +.+|...|+++|.++|+++|+++|+|++|+.|... +....
T Consensus 125 ~~~--~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~-n~tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~-~~~~~- 198 (399)
T 2oga_A 125 ATP--VPVEPHEDHPTLDPLLVEKAITP-RTRALLPV-HLYGHPADMDALRELADRHGLHIVEDAAQAHGARY-RGRRI- 198 (399)
T ss_dssp CEE--EEECBCSSSSSBCHHHHHHHCCT-TEEEECCB-CGGGCCCCHHHHHHHHHHHTCEECEECTTCTTCEE-TTEET-
T ss_pred CEE--EEEecCCCCCCcCHHHHHHhcCC-CCeEEEEe-CCcCCccCHHHHHHHHHHcCCEEEEECcccccCcc-CCeec-
Confidence 334 33455544678999999999987 78887753 12799999999999999999999999999877543 22111
Q ss_pred CCCccEEEecC--CccCCCC-CceEEEEecCchhhccCCccchhhHHHHhhhccc-----------CCCCCCCchHHHHH
Q 022463 184 FEYADVVTTTT--HKSLRGP-RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVF-----------PGLQGGPHNHTITG 249 (297)
Q Consensus 184 ~~~~D~~~~s~--~K~l~gp-~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-----------~~~~~t~~~~~~~a 249 (297)
....|++++|+ +|+++++ +||+++++++ ++.+.+..... .+...+.+....++
T Consensus 199 ~~~~di~~~S~~~sK~~~~~G~~g~~~~~~~-------------~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~ 265 (399)
T 2oga_A 199 GAGSSVAAFSFYPGKNLGCFGDGGAVVTGDP-------------ELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAV 265 (399)
T ss_dssp TCTTCEEEEECCTTSSSCCSSCCEEEEESCH-------------HHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHH
T ss_pred ccccCEEEEeCCCCccCCcCCceEEEEeCCH-------------HHHHHHHHHHhcCccccccccccccCCCcCHHHHHH
Confidence 01369999998 5998653 5688887632 12221111100 01112344455555
Q ss_pred HHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 250 LAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 250 l~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
+.++++. ++.+.++.+++.+++.+.|++++.++
T Consensus 266 ~~~~l~~------~~~~~~~~~~~~~~l~~~L~~~~g~~ 298 (399)
T 2oga_A 266 LRIRLAH------LDSWNGRRSALAAEYLSGLAGLPGIG 298 (399)
T ss_dssp HHHHHHT------HHHHHHHHHHHHHHHHHHTTTCTTCB
T ss_pred HHHHHHH------HHHHHHHHHHHHHHHHHHhccCCCcc
Confidence 5555543 34567777888999999999887654
No 91
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.84 E-value=6.4e-20 Score=165.91 Aligned_cols=233 Identities=12% Similarity=0.034 Sum_probs=157.6
Q ss_pred CCCchhHHHHHHHHHHHHHHHcCC--CCCCCcce-EEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCccccccccccc
Q 022463 22 YGGNEYIDMAESLCQKRALEAFRL--DPEKWGVN-VQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTK 97 (297)
Q Consensus 22 ~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~~-v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~ 97 (297)
|+......++++.+.+++.+.+|. +++ . +++++|+ .++..++.+++++||+|+++..+|++.....
T Consensus 59 y~~~~g~~~l~~~la~~~~~~~g~~~~~~----~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~------ 128 (389)
T 1gd9_A 59 YGPNIGLLELREAIAEKLKKQNGIEADPK----TEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAV------ 128 (389)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCCCCTT----TSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHH------
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCCCC----CeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHH------
Confidence 444445678887666777776684 443 4 6676665 6777788888999999999998888764322
Q ss_pred ccceeeeeeEeeecccCC-CCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcc---cHHHHHHHHHhcCCEEEEehhhh
Q 022463 98 KISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVA-GASA-YARLY---DYERIRKVCNKQKAIMLADMAHI 171 (297)
Q Consensus 98 ~~~~~g~~~~~v~~~~~~-~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~---~~~~i~~la~~~g~~livD~a~~ 171 (297)
...|..+..+ +.++ .++.+|++++++.+++ ++++|++ +++| +|.+. ++++|.++|++||+++|+|++|+
T Consensus 129 --~~~g~~~~~v--~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~ 203 (389)
T 1gd9_A 129 --ILAGGKPVEV--PTYEEDEFRLNVDELKKYVTD-KTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYE 203 (389)
T ss_dssp --HHHTCEEEEE--ECCGGGTTCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred --HHCCCEEEEe--ccCCccCCCCCHHHHHHhcCc-CceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhh
Confidence 2233334444 4442 2457899999999987 8888888 6777 78776 48899999999999999999998
Q ss_pred cccccc----cCCCCC-CCCccEEEecCCccCCCCC--ceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCch
Q 022463 172 SGLVAA----GVIPSP-FEYADVVTTTTHKSLRGPR--GAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHN 244 (297)
Q Consensus 172 ~g~~~~----~~~~~~-~~~~D~~~~s~~K~l~gp~--gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~ 244 (297)
.+.... .+.... ..+.|+++.|+||+++.|. .|++++++ ++.+.+...... ...+++.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------------~~~~~l~~~~~~-~~~~~~~ 268 (389)
T 1gd9_A 204 HFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPS--------------WIIERMVKFQMY-NATCPVT 268 (389)
T ss_dssp TCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCH--------------HHHHHHHHHHTT-TTCSCCH
T ss_pred hcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEECH--------------HHHHHHHHHHhh-hccCCCH
Confidence 765421 111110 0257899999999874232 39999887 344444332211 1234556
Q ss_pred HHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 245 HTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 245 ~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
+..+++.++|+.......+++++++.+++.+++.+.|++.
T Consensus 269 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 308 (389)
T 1gd9_A 269 FIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEM 308 (389)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHc
Confidence 6666666666643321146778888888888888888775
No 92
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.84 E-value=4.3e-20 Score=166.29 Aligned_cols=232 Identities=13% Similarity=0.049 Sum_probs=157.4
Q ss_pred cCCCchhHHHHHHHHHHHHHHHc-CCCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccc
Q 022463 21 YYGGNEYIDMAESLCQKRALEAF-RLDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKK 98 (297)
Q Consensus 21 ~~~~~~~~~~~e~~~~~~la~~~-g~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~ 98 (297)
.|+..+...+++ +.+++++ ++++++ +++++|+ .++..++.+++++||+|+++...|.+.....
T Consensus 58 ~y~~~~g~~~l~----~~la~~~~~~~~~~----v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~------- 122 (375)
T 3op7_A 58 NYGWIEGSPAFK----KSVSQLYTGVKPEQ----ILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDIP------- 122 (375)
T ss_dssp SSCCTTCCHHHH----HHHHTTSSSCCGGG----EEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHHHH-------
T ss_pred CCCCCCChHHHH----HHHHHHhccCChhh----EEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHH-------
Confidence 444555567888 8888887 456654 7777776 6887788899999999999998887764322
Q ss_pred cceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCEEEEehhhhcc
Q 022463 99 ISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYD---YERIRKVCNKQKAIMLADMAHISG 173 (297)
Q Consensus 99 ~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~livD~a~~~g 173 (297)
...|..+..++++.+ +++.+|++++++++++ ++++|++ +++| +|.+.| +++|.++|++||+++|+|++|+..
T Consensus 123 -~~~g~~~~~v~~~~~-~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~ 199 (375)
T 3op7_A 123 -KSLGAEVDLWQIEEE-NGWLPDLEKLRQLIRP-TTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSF 199 (375)
T ss_dssp -HHTTCEEEEEEEEGG-GTTEECHHHHHHHCCT-TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCC
T ss_pred -HHcCCEEEEEecccc-CCCCCCHHHHHHhhcc-CCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccc
Confidence 223333444443322 3567899999999987 8999988 6767 799999 899999999999999999998754
Q ss_pred cccccCCCC-CCCCccEEEecCCccCCC--CCceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHH
Q 022463 174 LVAAGVIPS-PFEYADVVTTTTHKSLRG--PRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGL 250 (297)
Q Consensus 174 ~~~~~~~~~-~~~~~D~~~~s~~K~l~g--p~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al 250 (297)
... +.... ...+.++++.|++|+++. .+.|++++++ ++.+.+....... ..+++....+++
T Consensus 200 ~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~v~~~~--------------~l~~~~~~~~~~~-~~~~~~~~~~~~ 263 (375)
T 3op7_A 200 SEL-DVPSIIEVYDKGIAVNSLSKTYSLPGIRIGWVAANH--------------QVTDILRDYRDYT-MICAGVFDDLVA 263 (375)
T ss_dssp SSS-CCCCHHHHCTTEEEEEESSSSSSCGGGCCEEEECCH--------------HHHHHHTTTGGGT-TSCCCHHHHHHH
T ss_pred ccc-CCCchhhhcCCEEEEeEChhhcCCcccceEEEEeCH--------------HHHHHHHHHHhhh-ccCCCcHHHHHH
Confidence 332 11000 001345888999999853 3348888866 4455444332221 223345555555
Q ss_pred HHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 251 AVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 251 ~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
..+++... . .+++.+++.++..+++.+.|++.+.++
T Consensus 264 ~~~l~~~~-~-~~~~~~~~~~~~~~~l~~~l~~~~~~~ 299 (375)
T 3op7_A 264 QLALAHYQ-E-ILERNRHILEENLAILDQWIEEEPLVS 299 (375)
T ss_dssp HHHHHTHH-H-HHHHHHHHHHHHHHHHHHHHHHCTTEE
T ss_pred HHHHhccH-H-HHHHHHHHHHHHHHHHHHHHhhCCCce
Confidence 66666432 2 466777777888888888888876654
No 93
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.84 E-value=1.1e-19 Score=163.11 Aligned_cols=222 Identities=12% Similarity=0.019 Sum_probs=155.6
Q ss_pred hHHHHHHHHHHHHHHHcCC-CCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeee
Q 022463 27 YIDMAESLCQKRALEAFRL-DPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 104 (297)
Q Consensus 27 ~~~~~e~~~~~~la~~~g~-~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 104 (297)
...+++ +++++++|+ +++ .+++++|+ .++..++.+++++||+|+++..+|.+...... ..|.
T Consensus 68 ~~~~l~----~~la~~~g~~~~~----~i~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~--------~~g~ 131 (367)
T 3euc_A 68 SSEALR----AKLKEVMQVPAGM----EVLLGNGSDEIISMLALAAARPGAKVMAPVPGFVMYAMSAQ--------FAGL 131 (367)
T ss_dssp CHHHHH----HHHHHHHTCCTTC----EEEEEEHHHHHHHHHHHHTCCTTCEEEEEESCSCCSCHHHH--------TTTC
T ss_pred cHHHHH----HHHHHHhCCCCcc----eEEEcCCHHHHHHHHHHHHcCCCCEEEEcCCCHHHHHHHHH--------HcCC
Confidence 345566 888999998 554 38888887 47766888889999999999988776643322 2233
Q ss_pred eeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcc---cHHHHHHHHHhc--CCEEEEehhhhcccccc
Q 022463 105 FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLY---DYERIRKVCNKQ--KAIMLADMAHISGLVAA 177 (297)
Q Consensus 105 ~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~---~~~~i~~la~~~--g~~livD~a~~~g~~~~ 177 (297)
.+ ++++.+ .++.+|++++++.+++++|++|++ +++| +|.+. ++++|.++|++| |+++|+|++|+... ..
T Consensus 132 ~~--~~v~~~-~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~-~~ 207 (367)
T 3euc_A 132 EF--VGVPLR-ADFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFA-QE 207 (367)
T ss_dssp EE--EEEECC-TTSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSS-SC
T ss_pred eE--EEecCC-CCCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhc-cc
Confidence 33 344555 467899999999998768999999 7777 88775 466788889999 99999999986422 11
Q ss_pred cCCC-CCCCCccEEEecCCccCC-CCCceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHHHHHH
Q 022463 178 GVIP-SPFEYADVVTTTTHKSLR-GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALK 255 (297)
Q Consensus 178 ~~~~-~~~~~~D~~~~s~~K~l~-gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~ 255 (297)
.... ....+.++++.|++|+.. |.+.|++++++ ++.+.+..... ..+++....+++.++|+
T Consensus 208 ~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~--------------~~~~~~~~~~~---~~~~~~~~~~a~~~~l~ 270 (367)
T 3euc_A 208 SWMSRLTDFGNLLVMRTVSKLGLAGIRLGYVAGDP--------------QWLEQLDKVRP---PYNVNVLTEATALFALE 270 (367)
T ss_dssp CSGGGGGTCTTEEEEEECCCTTSCSCCEEEEEECH--------------HHHHHHGGGCC---SSCCCHHHHHHHHHHHT
T ss_pred chHHHHhhCCCEEEEecchhhcccccCceeeeeCH--------------HHHHHHHHhCC---CCCCCHHHHHHHHHHhc
Confidence 1100 000145688899999822 22238888876 44555544322 23466677777777776
Q ss_pred HHhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 256 QVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 256 ~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
. .. .+++.+++.+++.+++.+.|++++.++
T Consensus 271 ~--~~-~~~~~~~~~~~~~~~l~~~l~~~~g~~ 300 (367)
T 3euc_A 271 H--VA-VLDEQAAQLRAERSRVAEGMAAHGGVT 300 (367)
T ss_dssp T--HH-HHHHHHHHHHHHHHHHHHHHHTSTTCE
T ss_pred C--HH-HHHHHHHHHHHHHHHHHHHHHhCCCcE
Confidence 5 23 578889999999999999999887765
No 94
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.84 E-value=1.5e-20 Score=170.83 Aligned_cols=221 Identities=15% Similarity=0.067 Sum_probs=156.0
Q ss_pred CCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHh--cCCCCeEEEecCCCCCccccccccccccc
Q 022463 22 YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKI 99 (297)
Q Consensus 22 ~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~ 99 (297)
|+..+...+++ +.++++++.+ + .+++++|++++..++..+ ..+||+|+++..+|++...++.
T Consensus 87 ~~~~~~~~~l~----~~la~~~~~~-~----~i~~~sG~~a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~------- 150 (401)
T 2bwn_A 87 SGTTAYHRRLE----AEIAGLHQKE-A----ALVFSSAYNANDATLSTLRVLFPGLIIYSDSLNHASMIEGIK------- 150 (401)
T ss_dssp BCCBHHHHHHH----HHHHHHTTCS-E----EEEESCHHHHHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHH-------
T ss_pred cCChHHHHHHH----HHHHHHhCCC-c----EEEECCcHHHHHHHHHHHhcCCCCCEEEECchhhHHHHHHHH-------
Confidence 34445566666 8899999974 2 489999999887666655 3699999999988888765432
Q ss_pred ceeeeeeEeeecccCCCCCcCCHHHHHHHhhh---cCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhccc
Q 022463 100 SAVSIFFETMPYRLNESTGYIDYDQLEKSATL---FRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGL 174 (297)
Q Consensus 100 ~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~---~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~ 174 (297)
..|..+..+ +.+ |++++++.++. .++++|++ +++| +|.+.|+++|.++|++||+++|+|++|+.|.
T Consensus 151 -~~g~~~~~v--~~~------d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~ 221 (401)
T 2bwn_A 151 -RNAGPKRIF--RHN------DVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGM 221 (401)
T ss_dssp -HSCCCEEEE--CTT------CHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTT
T ss_pred -HcCCeEEEE--cCC------CHHHHHHHHHhhccCCceEEEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEeccccccc
Confidence 223333333 332 78899998873 27888888 6767 7999999999999999999999999999665
Q ss_pred ccc-c--CC-CCC-CCCccEEEecCCccCCCCCceEEEEecCchhhccCCccchhhHHHHhhhccc--CCCCCCCchHHH
Q 022463 175 VAA-G--VI-PSP-FEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVF--PGLQGGPHNHTI 247 (297)
Q Consensus 175 ~~~-~--~~-~~~-~~~~D~~~~s~~K~l~gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~t~~~~~~ 247 (297)
... + .. ... ....|+++.|++|+++. .||+++.+++ +.+.+..... ....++++ ...
T Consensus 222 ~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~-~GG~~~~~~~--------------~~~~l~~~~~~~~~~~~~~~-~~~ 285 (401)
T 2bwn_A 222 YGPRGAGVAERDGLMHRIDIFNGTLAKAYGV-FGGYIAASAR--------------MVDAVRSYAPGFIFSTSLPP-AIA 285 (401)
T ss_dssp SSTTSCCHHHHHTCGGGCSEEEEESSSTTCS-CCEEEEECHH--------------HHHHHHHHCHHHHTSBCCCH-HHH
T ss_pred cCCCCceeeeccCccccCcEEEeechhhccC-CCCEEecCHH--------------HHHHHHHhCcCceecCCCCH-HHH
Confidence 321 1 00 000 01358899999999864 4588887763 3333322111 11133444 777
Q ss_pred HHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 248 TGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 248 ~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
+++.++++.+.+. |+++++++.+++.+++.+.|+++
T Consensus 286 ~a~~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 321 (401)
T 2bwn_A 286 AGAQASIAFLKTA-EGQKLRDAQQMHAKVLKMRLKAL 321 (401)
T ss_dssp HHHHHHHHHHTSH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHC
Confidence 8888999988776 78899999999999999998875
No 95
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.84 E-value=6e-20 Score=167.55 Aligned_cols=161 Identities=16% Similarity=0.144 Sum_probs=122.8
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeee
Q 022463 25 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 104 (297)
Q Consensus 25 ~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 104 (297)
.+..++++ +.+++++|.+. .+++++|+.++..++.+++++||+|+++...|+++..++... +...|.
T Consensus 61 ~~~~~~l~----~~ia~~~g~~~-----~i~~~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~----~~~~g~ 127 (404)
T 1e5e_A 61 NPTVSNLE----GKIAFLEKTEA-----CVATSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHA----LTKFGI 127 (404)
T ss_dssp CHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTH----HHHTTC
T ss_pred ChHHHHHH----HHHHHHhCCCc-----EEEeCChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHH----HHHcCC
Confidence 45555666 88899999862 378888887777788888999999999998888876543321 112232
Q ss_pred eeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHh-cCCEEEEehhhhcccccccCCC
Q 022463 105 FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNK-QKAIMLADMAHISGLVAAGVIP 181 (297)
Q Consensus 105 ~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~-~g~~livD~a~~~g~~~~~~~~ 181 (297)
.+ +.++.+ |++++++.+++ +|++|++ +++| +|.+.|+++|.++|++ +|+++|+|++|+.+.....+ .
T Consensus 128 ~~--~~v~~~------d~~~l~~~i~~-~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~~~~~~~-~ 197 (404)
T 1e5e_A 128 QV--DFINTA------IPGEVKKHMKP-NTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMITNPV-D 197 (404)
T ss_dssp EE--EEECTT------STTHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTTCCGG-G
T ss_pred EE--EEECCC------CHHHHHHhcCC-CCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchhhhCCcc-c
Confidence 23 333332 78899999987 8999999 7878 8999999999999999 99999999999877643211 1
Q ss_pred CCCCCccEEEecCCccCCCCC---ceEEEEecC
Q 022463 182 SPFEYADVVTTTTHKSLRGPR---GAMIFFRKG 211 (297)
Q Consensus 182 ~~~~~~D~~~~s~~K~l~gp~---gG~i~~~~~ 211 (297)
. ++|+++.|++|++++|. +|+++++++
T Consensus 198 ~---~~di~~~S~sK~~~~~g~ri~G~~~~~~~ 227 (404)
T 1e5e_A 198 F---GVDVVVHSATKYINGHTDVVAGLICGKAD 227 (404)
T ss_dssp G---TCSEEEEETTTTTTCSSCCCCEEEEECHH
T ss_pred c---CCEEEEEcCccccCCCCCCeEEEEEECHH
Confidence 2 68999999999998876 488888773
No 96
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.84 E-value=2.6e-20 Score=166.20 Aligned_cols=227 Identities=17% Similarity=0.153 Sum_probs=150.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeeeeE
Q 022463 29 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFE 107 (297)
Q Consensus 29 ~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 107 (297)
.++++.+++++++++|+++++ +++++|+ .++..++.+++++||+|+++..+|++.... .. +...|..+.
T Consensus 48 ~~~~~~~~~~l~~~~g~~~~~----v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~-~~-----~~~~g~~~~ 117 (359)
T 1svv_A 48 DSHCAKAARLIGELLERPDAD----VHFISGGTQTNLIACSLALRPWEAVIATQLGHISTHET-GA-----IEATGHKVV 117 (359)
T ss_dssp SHHHHHHHHHHHHHHTCTTSE----EEEESCHHHHHHHHHHHHCCTTEEEEEETTSHHHHSST-TH-----HHHTTCCEE
T ss_pred cHHHHHHHHHHHHHhCCCCcc----EEEeCCchHHHHHHHHHHhCCCCEEEEcccchHHHHHH-HH-----HhcCCCeeE
Confidence 456666679999999987754 7777666 577778888899999999999888877553 11 112233343
Q ss_pred eeecccCCCCCcCCHHHHHHHhhhc------CCcEEEE-cCCCCCCccc---HHHHHHHHHhcCCEEEEehhh---hccc
Q 022463 108 TMPYRLNESTGYIDYDQLEKSATLF------RPKLIVA-GASAYARLYD---YERIRKVCNKQKAIMLADMAH---ISGL 174 (297)
Q Consensus 108 ~v~~~~~~~~~~~d~~~l~~~l~~~------~~~~v~~-~~~~~G~~~~---~~~i~~la~~~g~~livD~a~---~~g~ 174 (297)
.+ +.+ ++.+|++++++.+++. ++++|++ +++++|.+.| +++|.++|++||+++|+|++| +.|.
T Consensus 118 ~v--~~~--~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~ 193 (359)
T 1svv_A 118 TA--PCP--DGKLRVADIESALHENRSEHMVIPKLVYISNTTEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSS 193 (359)
T ss_dssp EE--CCT--TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESSCTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTS
T ss_pred EE--eCC--CCeecHHHHHHHHHHHHhccCCCceEEEEEcCCCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcC
Confidence 34 443 5789999999999873 2788888 5644798888 889999999999999999998 5454
Q ss_pred ccccCCCCCC-CCccEEEecCCccCCCCCc-eEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHHH
Q 022463 175 VAAGVIPSPF-EYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAV 252 (297)
Q Consensus 175 ~~~~~~~~~~-~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~ 252 (297)
.+.+...... ..+|++++|++|+ ++|.| |+++++++...+ +....... .... +.+....+++.
T Consensus 194 ~~~~~~~~~~~~~~d~~~~s~~K~-g~~~~~g~l~~~~~~~~~----------~~~~~~~~--~~~~-~~~~~~~~~~~- 258 (359)
T 1svv_A 194 PVNDLTLADIARLTDMFYIGATKA-GGMFGEALIILNDALKPN----------ARHLIKQR--GALM-AKGWLLGIQFE- 258 (359)
T ss_dssp TTCCCCHHHHHHHCSEEEEECTTT-TCSSCEEEEECSGGGCTT----------HHHHHHHT--TCCC-TTTHHHHHHHH-
T ss_pred CCcchhhhhhhhcCCEEEEecccC-CCCCceEEEEEcccHHHH----------HHHHHhcC--Cccc-ccchhhHHHHH-
Confidence 4332211000 1579999999996 67888 999987753111 11100000 1101 11222222222
Q ss_pred HHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 253 ALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 253 al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
..+.+. +++++.++.+++.+++.+.| +.+.++
T Consensus 259 --~~l~~~-~~~~~~~~~~~~~~~l~~~L-~~~~~~ 290 (359)
T 1svv_A 259 --VLMKDN-LFFELGAHSNKMAAILKAGL-EACGIR 290 (359)
T ss_dssp --HHTSTT-HHHHHHHHHHHHHHHHHHHH-HHTTCC
T ss_pred --HHHhhh-hHHHHHHHHHHHHHHHHHHh-ccCCeE
Confidence 234443 67888889999999999988 555543
No 97
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.84 E-value=5.6e-20 Score=166.50 Aligned_cols=159 Identities=19% Similarity=0.170 Sum_probs=121.6
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeee
Q 022463 26 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 105 (297)
Q Consensus 26 ~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 105 (297)
+...+++ +.++++++.+ + .+++++|+.++..++.+++++||+|+++..+|++...++... +...|..
T Consensus 52 ~~~~~l~----~~la~~~~~~-~----~i~~~sGt~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~----~~~~g~~ 118 (386)
T 1cs1_A 52 PTRDVVQ----RALAELEGGA-G----AVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSL----AKRGCYR 118 (386)
T ss_dssp HHHHHHH----HHHHHHHTCS-E----EEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHH----HTTTSCE
T ss_pred ccHHHHH----HHHHHHhCCC-c----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHH----HHhcCCE
Confidence 4445555 8999999987 3 488899987887788888999999999998888765433211 0112222
Q ss_pred eEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCCCC
Q 022463 106 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 183 (297)
Q Consensus 106 ~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~~~ 183 (297)
+..+ +. .|++++++.+++ ++++|++ +++| +|.+.|+++|.++|+++|+++|+|++|+.+...... ..
T Consensus 119 ~~~~--~~------~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~-~~- 187 (386)
T 1cs1_A 119 VLFV--DQ------GDEQALRAALAE-KPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQNPL-AL- 187 (386)
T ss_dssp EEEE--CT------TCHHHHHHHHHT-CCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGG-GG-
T ss_pred EEEe--CC------CCHHHHHHhhcc-CCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCcc-cc-
Confidence 3233 32 289999999987 8999999 6777 799999999999999999999999999877654322 12
Q ss_pred CCCccEEEecCCccCCCCCc---eEEEEec
Q 022463 184 FEYADVVTTTTHKSLRGPRG---AMIFFRK 210 (297)
Q Consensus 184 ~~~~D~~~~s~~K~l~gp~g---G~i~~~~ 210 (297)
++|++++|+||++++|.+ |++++++
T Consensus 188 --~~di~~~s~sK~~~~~~~~~~G~~~~~~ 215 (386)
T 1cs1_A 188 --GADLVLHSCTKYLNGHSDVVAGVVIAKD 215 (386)
T ss_dssp --TCSEEEEETTTTTTCSSCCCCEEEEESS
T ss_pred --CceEEEEcCcccccCCCCceeEEEEeCc
Confidence 689999999999988764 8888876
No 98
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.84 E-value=5e-20 Score=167.44 Aligned_cols=238 Identities=10% Similarity=-0.014 Sum_probs=157.6
Q ss_pred CCCchhHHHHHHHHHHHHHHHcCCC--C-CCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCccccccccccc
Q 022463 22 YGGNEYIDMAESLCQKRALEAFRLD--P-EKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTK 97 (297)
Q Consensus 22 ~~~~~~~~~~e~~~~~~la~~~g~~--~-~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~ 97 (297)
|+......++++.+.+++++++|.+ + ++ +++++|+ .++..++.+++++||+|+++...|.++....
T Consensus 74 y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~----i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~------ 143 (407)
T 3nra_A 74 YTEYRGDLGIRDLLAPRLAAFTGAPVDARDG----LIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLV------ 143 (407)
T ss_dssp SCCTTCCHHHHHHHHHHHHHHHTSCCCTTTS----EEEESHHHHHHHHHHHTTCCTTCEEEEEESCCTHHHHHH------
T ss_pred cCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc----EEEeCCcHHHHHHHHHHhCCCCCEEEEcCCcccchHHHH------
Confidence 3333445677777889999999984 2 33 7787777 5777788888999999999998887664322
Q ss_pred ccceeeeeeEeeeccc---CCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCEEEEehh
Q 022463 98 KISAVSIFFETMPYRL---NESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYD---YERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 98 ~~~~~g~~~~~v~~~~---~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~livD~a 169 (297)
...|..+..+++.. +++++.+|++++++.+++ ++++|++ +++| +|.+.| +++|.++|++||+++|+|++
T Consensus 144 --~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea 220 (407)
T 3nra_A 144 --EFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKA-GARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQL 220 (407)
T ss_dssp --HHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHT-TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECT
T ss_pred --HHcCCEEEEeecccccccCcCCCcCHHHHHHHHhh-CCcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 22333344444321 125678999999999988 8998888 7777 798888 88999999999999999999
Q ss_pred hhccccccc----CCCC--CCCCccEEEecCCccCC--CCCceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCC
Q 022463 170 HISGLVAAG----VIPS--PFEYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGG 241 (297)
Q Consensus 170 ~~~g~~~~~----~~~~--~~~~~D~~~~s~~K~l~--gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t 241 (297)
|+.+..... +... ...+.++++.|++|+++ |.+.|+++.+++ +.+.+....... ..+
T Consensus 221 ~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~--------------~~~~l~~~~~~~-~~~ 285 (407)
T 3nra_A 221 YSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSRA--------------IIARMEKLQAIV-SLR 285 (407)
T ss_dssp TTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECHH--------------HHHHHHHHHHHH-TSS
T ss_pred ccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCHH--------------HHHHHHHHHhhh-ccC
Confidence 986443211 1100 00145688999999874 233388888763 333333221111 123
Q ss_pred CchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCccc
Q 022463 242 PHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIEE 289 (297)
Q Consensus 242 ~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~ 289 (297)
++....+++.++++. ....+++..++.+++.+++.+.|++++.++.
T Consensus 286 ~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 331 (407)
T 3nra_A 286 AAGYSQAVLRGWFDE--APGWMEDRIARHQAIRDELLHVLRGCEGVFA 331 (407)
T ss_dssp SCHHHHGGGGGTTCC--CTTHHHHHHHHHHHHHHHHHHHHHTSTTCBC
T ss_pred CChHHHHHHHHHHhc--cchHHHHHHHHHHHHHHHHHHHHhcCCCcee
Confidence 333444443333321 1114677788888899999999988876553
No 99
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.84 E-value=2.3e-20 Score=170.85 Aligned_cols=161 Identities=19% Similarity=0.213 Sum_probs=122.7
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeee
Q 022463 25 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 104 (297)
Q Consensus 25 ~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 104 (297)
++..++++ +++++++|.+. .++++||+.++..++.+++++||+|+++...|++....+... ....|.
T Consensus 80 ~p~~~~l~----~~la~~~g~~~-----~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~----~~~~g~ 146 (414)
T 3ndn_A 80 NPTVSVFE----ERLRLIEGAPA-----AFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEI----LPRWGV 146 (414)
T ss_dssp CHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTH----HHHTTC
T ss_pred ChHHHHHH----HHHHHHHCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHH----HHHcCc
Confidence 45566666 99999999753 377788888887788889999999999998887765433211 011222
Q ss_pred eeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCCC
Q 022463 105 FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 182 (297)
Q Consensus 105 ~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~~ 182 (297)
.+ ++++.+ |++++++++++ +|++|++ +++| +|.+.|+++|.++|+++|+++|+|++|+.+.....+ ..
T Consensus 147 ~~--~~v~~~------d~~~l~~ai~~-~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~-~~ 216 (414)
T 3ndn_A 147 QT--VFVDGD------DLSQWERALSV-PTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQQGF-PL 216 (414)
T ss_dssp EE--EEECTT------CHHHHHHHTSS-CCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCCG-GG
T ss_pred EE--EEeCCC------CHHHHHHhcCC-CCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcccccCCch-hc
Confidence 23 333332 89999999987 8999999 7778 799999999999999999999999999876543322 22
Q ss_pred CCCCccEEEecCCccCCCCC---ceEEEEecC
Q 022463 183 PFEYADVVTTTTHKSLRGPR---GAMIFFRKG 211 (297)
Q Consensus 183 ~~~~~D~~~~s~~K~l~gp~---gG~i~~~~~ 211 (297)
++|+++.|++|+++++. +|+++.+++
T Consensus 217 ---g~div~~S~sK~l~~~G~~~~G~vv~~~~ 245 (414)
T 3ndn_A 217 ---GVDVVVYSGTKHIDGQGRVLGGAILGDRE 245 (414)
T ss_dssp ---TCSEEEEETTTTTTCSSCCCCEEEEECHH
T ss_pred ---CCCeEeccCCccccCCCCceEEEEEECHH
Confidence 78999999999997744 688888774
No 100
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.84 E-value=1.1e-20 Score=173.00 Aligned_cols=235 Identities=13% Similarity=0.124 Sum_probs=146.3
Q ss_pred HHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHh-cCCCCeEEEecCCCCCcccccccccccccceeeeeeEeeecc
Q 022463 34 LCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 112 (297)
Q Consensus 34 ~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 112 (297)
+.++++++++|++. .+++++|+.++..++.++ +++||+|+++..+|.+....+. ..|..+ +.++
T Consensus 46 ~l~~~la~~~g~~~-----~i~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~--------~~g~~~--~~~~ 110 (418)
T 2c81_A 46 KFAKAFADFNGVPY-----CVPTTSGSTALMLALEALGIGEGDEVIVPSLTWIATATAVL--------NVNALP--VFVD 110 (418)
T ss_dssp HHHHHHHHHHTCSE-----EEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHH--------HTTCEE--EEEC
T ss_pred HHHHHHHHHhCCCc-----EEEeCCHHHHHHHHHHHcCCCCcCEEEECCCccHhHHHHHH--------HcCCEE--EEEe
Confidence 34489999999873 378888888887788888 8999999999988888765432 223333 3445
Q ss_pred cCCCCCcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCCCCCCCccEEEe
Q 022463 113 LNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTT 192 (297)
Q Consensus 113 ~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~~~~~~~D~~~~ 192 (297)
.+++++.+|++++++.+++ ++++|+++ +.+|...|+++|.++|+++|+++|+|++|+.+....+.....+..+++.++
T Consensus 111 ~~~~~~~~d~~~l~~~i~~-~~~~v~~~-~~~G~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~s~ 188 (418)
T 2c81_A 111 VEADTYCIDPQLIKSAITD-KTKAIIPV-HLFGSMANMDEINEIAQEHNLFVIEDCAQSHGSVWNNQRAGTIGDIGAFSC 188 (418)
T ss_dssp BCTTTCSBCHHHHGGGCCT-TEEEECCB-CCTTCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEEC
T ss_pred cCCCCCCcCHHHHHHhhCC-CCeEEEEe-CCcCCcccHHHHHHHHHHCCCEEEEECcccccCccCCEecccccceEEEec
Confidence 5544788999999999987 88888873 137889999999999999999999999999886321111111112444455
Q ss_pred cCCccCCCCCceEEEEec-Cch--hh-ccCCccchhhHHHHhhhccc-----CCCCCCCchHHHHHHHHHHHHHhhhcCh
Q 022463 193 TTHKSLRGPRGAMIFFRK-GVK--EI-NKQGKEVFYDYEEKINQAVF-----PGLQGGPHNHTITGLAVALKQVCTLITF 263 (297)
Q Consensus 193 s~~K~l~gp~gG~i~~~~-~~~--~~-~~~g~~~~~~~~~~~~~~~~-----~~~~~t~~~~~~~al~~al~~~~~~~g~ 263 (297)
|.||++++++||++++++ ++. ++ ...++.....+.......+. +...+.. ..+..+.+++...... .+
T Consensus 189 s~~K~~~~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~aa~~~~~l~-~~ 265 (418)
T 2c81_A 189 QQGKVLTAGEGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLVKKGDIQGSN--YCLSEFQSAILLDQLQ-EL 265 (418)
T ss_dssp CTTSSSCSSSCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBSEEECCSSCCCB--CCCCHHHHHHHHHHHT-TH
T ss_pred cCCcccCCCCeEEEEECCHHHHHHHHHHHHhCccccccccccccchhhccccccccCcC--CCcCHHHHHHHHHHHH-HH
Confidence 559998665558888853 321 11 11111100000000000000 0110000 0011122233222223 67
Q ss_pred hhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 264 SHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 264 ~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
+++.++.+++.+++.+.|++++.++
T Consensus 266 ~~~~~~~~~~~~~l~~~L~~~~g~~ 290 (418)
T 2c81_A 266 DDKNAIREKNAMFLNDALSKIDGIK 290 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSTTEE
T ss_pred HHHHHHHHHHHHHHHHHhccCCCcc
Confidence 8888888999999999999887654
No 101
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.84 E-value=2.4e-19 Score=162.87 Aligned_cols=163 Identities=15% Similarity=0.193 Sum_probs=123.9
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHh-cCCCCeEEEecCCCCCcccccccccccccceee
Q 022463 26 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS 103 (297)
Q Consensus 26 ~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 103 (297)
+...+++ +.+++++|.+. +++++|+ .++..++.++ +++||+|+++..+|++...++. ..|
T Consensus 32 ~~~~~l~----~~la~~~~~~~------v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~~~~~~~~~~~~--------~~g 93 (394)
T 1o69_A 32 EFVNRFE----QSVKDYSKSEN------ALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPIC--------YLK 93 (394)
T ss_dssp HHHHHHH----HHHHHHHCCSE------EEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGTHHHH--------HTT
T ss_pred hHHHHHH----HHHHHHhCCCc------EEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHHHHHH--------HcC
Confidence 4466666 88899998742 6666665 6777788888 8999999999999888865443 223
Q ss_pred eeeEeeecccCCCCCcCCHHHHHHHhhhc--CCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCC
Q 022463 104 IFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP 181 (297)
Q Consensus 104 ~~~~~v~~~~~~~~~~~d~~~l~~~l~~~--~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~ 181 (297)
..+ +.++.+ +++.+|++++++.+++. ++++|++.. .+|...|+++|.++|+++|+++|+|++|+.|....+...
T Consensus 94 ~~~--~~v~~~-~~~~~d~~~l~~~i~~~~~~~~~v~~~~-~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~ 169 (394)
T 1o69_A 94 AKP--VFIDCD-ETYNIDVDLLKLAIKECEKKPKALILTH-LYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKNKAL 169 (394)
T ss_dssp CEE--EEECBC-TTSSBCHHHHHHHHHHCSSCCCEEEEEC-GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEET
T ss_pred CEE--EEEEeC-CCCCcCHHHHHHHHhcccCCceEEEEEC-CCCChhhHHHHHHHHHHcCCEEEEECcCcccceeCCccc
Confidence 323 344555 56889999999999864 688888832 578999999999999999999999999997766543322
Q ss_pred CCCCCccEEEecCCccCCCCCceEEEEec
Q 022463 182 SPFEYADVVTTTTHKSLRGPRGAMIFFRK 210 (297)
Q Consensus 182 ~~~~~~D~~~~s~~K~l~gp~gG~i~~~~ 210 (297)
.++..+|+.++|.+|.++++++|++++++
T Consensus 170 ~~~~~~~~~s~s~~K~l~~~~~G~~~~~~ 198 (394)
T 1o69_A 170 GTFGEFGVYSYNGNKIITTSGGGMLIGKN 198 (394)
T ss_dssp TSSSSEEEEECCTTSSSCCSSCEEEEESC
T ss_pred ccccCcEEEEEeCCccCCCCCceEEEECC
Confidence 22236889999999988766669999964
No 102
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.84 E-value=1e-19 Score=166.40 Aligned_cols=158 Identities=14% Similarity=0.090 Sum_probs=116.5
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEecCCCCCccccccc-ccccccceeee
Q 022463 26 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQ-TDTKKISAVSI 104 (297)
Q Consensus 26 ~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~-~~~~~~~~~g~ 104 (297)
+..++++ +++++++|++. .+++++|+.++..++.+++++||+|+++..+|++...++.. ....++
T Consensus 56 ~~~~~l~----~~la~~~g~~~-----~~~~~~gt~a~~~al~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~----- 121 (412)
T 2cb1_A 56 PTAKALE----ERLKALEGALE-----AVVLASGQAATFAALLALLRPGDEVVAAKGLFGQTIGLFGQVLSLMGV----- 121 (412)
T ss_dssp HHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHTTCCTTCEEEEETTCCHHHHHHHHHTTTTTTC-----
T ss_pred hHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCC-----
Confidence 4555666 89999999863 25555566788778888899999999999999876654432 122222
Q ss_pred eeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCCC
Q 022463 105 FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 182 (297)
Q Consensus 105 ~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~~ 182 (297)
.+ +.++. |++++++.+++ +|++|++ +++| +|.+.|+++|.++|++||+++|+|++|+.+.........
T Consensus 122 ~~--~~~~~-------~~~~l~~~i~~-~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~ 191 (412)
T 2cb1_A 122 TV--RYVDP-------EPEAVREALSA-KTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAGALCRPLAW 191 (412)
T ss_dssp EE--EEECS-------SHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTTTSCCGGGG
T ss_pred EE--EEECC-------CHHHHHHHhcc-CCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCccccccCCcccc
Confidence 23 22222 38999999987 8999998 6777 799999999999999999999999999877222111112
Q ss_pred CCCCccEEEecCCccCCCCCc--eEEEEec
Q 022463 183 PFEYADVVTTTTHKSLRGPRG--AMIFFRK 210 (297)
Q Consensus 183 ~~~~~D~~~~s~~K~l~gp~g--G~i~~~~ 210 (297)
++|++++|+||++++|.+ |++++.+
T Consensus 192 ---~~di~~~S~~K~~~~~~~~~G~~~~~~ 218 (412)
T 2cb1_A 192 ---GAHVVVESLTKWASGHGSVLGGAVLSR 218 (412)
T ss_dssp ---TCSEEEEETTTTTTCSSCCCCEEEEEC
T ss_pred ---CCeEEEECCcccccCCCCcEEEEEEec
Confidence 689999999999988765 6655544
No 103
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.84 E-value=4.5e-20 Score=168.34 Aligned_cols=158 Identities=18% Similarity=0.153 Sum_probs=121.1
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeee
Q 022463 26 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 105 (297)
Q Consensus 26 ~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 105 (297)
+...+++ +.+++++|.+. .++++||++++..++. ++++||+|+++...|+++...+... +...|..
T Consensus 67 p~~~~l~----~~la~~~g~~~-----~i~~~sG~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~----~~~~G~~ 132 (403)
T 3cog_A 67 PTRNCLE----KAVAALDGAKY-----CLAFASGLAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQV----ASEFGLK 132 (403)
T ss_dssp HHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHT----GGGGTCE
T ss_pred chHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHH----HHHcCCE
Confidence 5556666 89999999873 4999999987776777 8899999999998888765433211 1112322
Q ss_pred eEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcC-CEEEEehhhhcccccccCCCC
Q 022463 106 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQK-AIMLADMAHISGLVAAGVIPS 182 (297)
Q Consensus 106 ~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g-~~livD~a~~~g~~~~~~~~~ 182 (297)
+ +.++.+ |++++++.+++ +|++|++ +++| +|.+.|+++|.++|+++| +++|+|++++.+.....+. .
T Consensus 133 v--~~v~~~------d~~~l~~~i~~-~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~~~~~~-~ 202 (403)
T 3cog_A 133 I--SFVDCS------KIKLLEAAITP-ETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQRPLA-L 202 (403)
T ss_dssp E--EEECTT------SHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTTCCTTT-T
T ss_pred E--EEECCC------CHHHHHHhcCc-CCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCcccccCCccc-c
Confidence 3 333332 89999999987 8999999 7877 799999999999999999 9999999998775422221 2
Q ss_pred CCCCccEEEecCCccCCCCCc---eEEEEec
Q 022463 183 PFEYADVVTTTTHKSLRGPRG---AMIFFRK 210 (297)
Q Consensus 183 ~~~~~D~~~~s~~K~l~gp~g---G~i~~~~ 210 (297)
++|++++|++|+++||.+ |++++++
T Consensus 203 ---~~div~~S~sK~~~g~~~~~~G~v~~~~ 230 (403)
T 3cog_A 203 ---GADISMYSATKYMNGHSDVVMGLVSVNC 230 (403)
T ss_dssp ---TCSEEEEETTTTTTCSSCCCCEEEEECC
T ss_pred ---CCeEEEEcChhhccCCCCCeEEEEEECc
Confidence 789999999999998764 8888864
No 104
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.84 E-value=5.3e-20 Score=166.39 Aligned_cols=231 Identities=12% Similarity=0.142 Sum_probs=158.6
Q ss_pred CCCchhHHHHHHHHHHHHHHHcCC--CCC-CCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCccccccccccc
Q 022463 22 YGGNEYIDMAESLCQKRALEAFRL--DPE-KWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTK 97 (297)
Q Consensus 22 ~~~~~~~~~~e~~~~~~la~~~g~--~~~-~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~ 97 (297)
|+......++++.+.+++.+.+|. +++ + +++++|+ .++..++.+++++||+|+++..+|++.....
T Consensus 63 y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~----v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~------ 132 (386)
T 1u08_A 63 YAPMTGVQALREAIAQKTERLYGYQPDADSD----ITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAI------ 132 (386)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHSCCCCTTTT----EEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHH------
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCCCCCCC----EEEcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHH------
Confidence 443345678887777777777775 444 4 8888887 4776688888999999999998888764322
Q ss_pred ccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCEEEEehhhhc
Q 022463 98 KISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYD---YERIRKVCNKQKAIMLADMAHIS 172 (297)
Q Consensus 98 ~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~livD~a~~~ 172 (297)
...|..+..+ +.+++++.+|++++++.+++ ++++|++ +++| +|.+.| +++|.++|++||+++|+|++|+.
T Consensus 133 --~~~g~~~~~v--~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 207 (386)
T 1u08_A 133 --ALSGGIVKRM--ALQPPHFRVDWQEFAALLSE-RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEH 207 (386)
T ss_dssp --HHTTCEEEEE--ECCTTTCCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTT
T ss_pred --HHcCCEEEEe--ecCcccCcCCHHHHHHhhcc-cCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccc
Confidence 2223334334 45533578999999999976 8899888 6777 787775 67999999999999999999876
Q ss_pred ccccc----cCCCCC-CCCccEEEecCCccCCCCC--ceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchH
Q 022463 173 GLVAA----GVIPSP-FEYADVVTTTTHKSLRGPR--GAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNH 245 (297)
Q Consensus 173 g~~~~----~~~~~~-~~~~D~~~~s~~K~l~gp~--gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~ 245 (297)
..... .+...+ ..+.|+++.|++|+++.|. .|+++++++ +.+.+...... ...+.+.+
T Consensus 208 ~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~--------------~~~~l~~~~~~-~~~~~~~~ 272 (386)
T 1u08_A 208 INFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAP--------------ISAEIRKVHQY-LTFSVNTP 272 (386)
T ss_dssp CBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCHH--------------HHHHHHHHHHH-HTSSCCHH
T ss_pred cccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCHH--------------HHHHHHHHHHh-hccCCChH
Confidence 33211 111000 0157899999999885332 499998773 33333221110 02234555
Q ss_pred HHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 246 TITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 246 ~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
..+++.++|+.. +. .+++++++.+++.+++.+.|++.
T Consensus 273 ~~~a~~~~l~~~-~~-~~~~~~~~~~~~~~~l~~~L~~~ 309 (386)
T 1u08_A 273 AQLALADMLRAE-PE-HYLALPDFYRQKRDILVNALNES 309 (386)
T ss_dssp HHHHHHHHHHHC-TH-HHHTHHHHHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHhCC-cH-HHHHHHHHHHHHHHHHHHHHHHC
Confidence 666667777654 33 67888999999999999999876
No 105
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.84 E-value=3.3e-20 Score=167.19 Aligned_cols=232 Identities=13% Similarity=0.149 Sum_probs=154.8
Q ss_pred HHHHHHHHHHHHHHHcC--CCCCCCcceEEecCChH-HHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeee
Q 022463 28 IDMAESLCQKRALEAFR--LDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 104 (297)
Q Consensus 28 ~~~~e~~~~~~la~~~g--~~~~~~~~~v~~~sG~~-~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 104 (297)
..++++.+++++++.+| +++++ +++++|++ ++..++.+++++||+|+++...|.+..... ...|.
T Consensus 61 ~~~~~~~l~~~l~~~~g~~~~~~~----v~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~--------~~~g~ 128 (383)
T 3kax_A 61 PENIGDIICNWTKKQYNWDIQKEW----IVFSAGIVPALSTSIQAFTKENESVLVQPPIYPPFFEMV--------TTNNR 128 (383)
T ss_dssp CTTHHHHHHHHHHHHHCCCCCGGG----EEEESCHHHHHHHHHHHHCCTTCEEEECSSCCHHHHHHH--------HHTTC
T ss_pred CHHHHHHHHHHHHHHhCCCCChhh----EEEcCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHH--------HHcCC
Confidence 45667777799999998 55543 88888884 766688888999999999987777654322 22333
Q ss_pred eeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccH---HHHHHHHHhcCCEEEEehhhhcccccccC
Q 022463 105 FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDY---ERIRKVCNKQKAIMLADMAHISGLVAAGV 179 (297)
Q Consensus 105 ~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~---~~i~~la~~~g~~livD~a~~~g~~~~~~ 179 (297)
.+..++++.+..++.+|++++++.+++ ++++|++ +++| +|.+.|. ++|.++|++||+++|+|++|+........
T Consensus 129 ~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~ 207 (383)
T 3kax_A 129 QLCVSPLQKQNDTYAIDFEHLEKQFQQ-GVKLMLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHT 207 (383)
T ss_dssp EEEECCCEEETTEEECCHHHHHHHHTT-TCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCC
T ss_pred EEEeccceecCCcEEEcHHHHHHHhCc-CCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCC
Confidence 343443322212356899999999965 8999988 7777 7888775 46666699999999999998764432111
Q ss_pred CCCCCC-------CccEEEecCCccCCCC--CceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHH
Q 022463 180 IPSPFE-------YADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGL 250 (297)
Q Consensus 180 ~~~~~~-------~~D~~~~s~~K~l~gp--~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al 250 (297)
..++. +.++++.|++|+++.| +.|+++++++ ++.+.+.........++++.+..+++
T Consensus 208 -~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~a~ 273 (383)
T 3kax_A 208 -HTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPNE-------------KLRQAFTSIQYRQGFHGLNIFAYTAM 273 (383)
T ss_dssp -CCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCH-------------HHHHHHHHHHHHTTCCCCCHHHHHHH
T ss_pred -ceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCCH-------------HHHHHHHHHHhhcccCCCCHHHHHHH
Confidence 11111 2348899999987422 3388888432 33443333222222346677777777
Q ss_pred HHHHHHHhhhcChhhHHHHhhhhHHHHHhhccC-CCCcc
Q 022463 251 AVALKQVCTLITFSHIHVFSLHVYPAFVSNQNN-SENIE 288 (297)
Q Consensus 251 ~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~-~~~~~ 288 (297)
.++++.. +. .+++++++.+++.+++.+.|++ ++.++
T Consensus 274 ~~~l~~~-~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 310 (383)
T 3kax_A 274 QSAYTEC-ND-WLNEIRFYIEDNAKFACEYIKDHIPTLS 310 (383)
T ss_dssp HHHTTTC-HH-HHHHHHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred HHHHHhh-HH-HHHHHHHHHHHHHHHHHHHHHhhCCCce
Confidence 7766542 22 4677888888899999988887 66654
No 106
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.83 E-value=2.7e-20 Score=168.06 Aligned_cols=227 Identities=15% Similarity=0.112 Sum_probs=158.1
Q ss_pred CCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccc
Q 022463 22 YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKIS 100 (297)
Q Consensus 22 ~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~ 100 (297)
|+......+++ +.+++++++++++ +++++|+ .++..++.+++++||+|+++..+|++..... .
T Consensus 57 y~~~~~~~~l~----~~la~~~~~~~~~----v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~--------~ 120 (381)
T 1v2d_A 57 YAPPAGLPALR----EALAEEFAVEPES----VVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDA--------F 120 (381)
T ss_dssp CCCTTCCHHHH----HHHHHHHTSCGGG----EEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHH--------H
T ss_pred CCCCCCCHHHH----HHHHHhcCCChhh----EEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHH--------H
Confidence 33333456677 8888889998764 8887777 5777788888999999999998888764322 2
Q ss_pred eeeeeeEeeecccC--CCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCEEEEehhhhcc
Q 022463 101 AVSIFFETMPYRLN--ESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYD---YERIRKVCNKQKAIMLADMAHISG 173 (297)
Q Consensus 101 ~~g~~~~~v~~~~~--~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~livD~a~~~g 173 (297)
..|..+..+ +.+ ++++.+|++++++.+++ ++++|++ +++| +|.+.| +++|.++|++||+++|+|++|+..
T Consensus 121 ~~g~~~~~v--~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~ 197 (381)
T 1v2d_A 121 LAGAKARLV--RLDLTPEGFRLDLSALEKALTP-RTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDEL 197 (381)
T ss_dssp HTTCEEEEE--ECEEETTEEECCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTC
T ss_pred HcCCEEEEE--eCCCCCccCCcCHHHHHHhcCc-CCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccc
Confidence 233334344 343 24578999999999976 8899888 6777 787765 789999999999999999998765
Q ss_pred ccc---ccCCCCCCCCccEEEecCCccCCCC--CceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHH
Q 022463 174 LVA---AGVIPSPFEYADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTIT 248 (297)
Q Consensus 174 ~~~---~~~~~~~~~~~D~~~~s~~K~l~gp--~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~ 248 (297)
... .++... ..+.|+++.|+||+++.| +.|++++++++ .+.+..... ....+++.+..+
T Consensus 198 ~~g~~~~~~~~~-~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~--------------~~~~~~~~~-~~~~~~~~~~~~ 261 (381)
T 1v2d_A 198 YYGERPRRLREF-APERTFTVGSAGKRLEATGYRVGWIVGPKEF--------------MPRLAGMRQ-WTSFSAPTPLQA 261 (381)
T ss_dssp BSSSCCCCHHHH-CTTTEEEEEEHHHHTTCGGGCCEEEECCTTT--------------HHHHHHHHH-HHTSSCCHHHHH
T ss_pred ccCCCCCCHHHh-cCCCEEEEeechhhcCCcccceEEEEeCHHH--------------HHHHHHHHh-hcccCCCcHHHH
Confidence 431 111100 126799999999987433 34999987743 222221110 002345667777
Q ss_pred HHHHHHHHHh-hhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 249 GLAVALKQVC-TLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 249 al~~al~~~~-~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
++.++|+... .. .+++++++.+++.+++.+.|++.
T Consensus 262 a~~~~l~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 297 (381)
T 1v2d_A 262 GVAEALKLARREG-FYEALREGYRRRRDLLAGGLRAM 297 (381)
T ss_dssp HHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCcccHH-HHHHHHHHHHHHHHHHHHHHHHC
Confidence 7778887653 33 67888899999999999998774
No 107
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.83 E-value=4.5e-20 Score=167.06 Aligned_cols=232 Identities=12% Similarity=0.054 Sum_probs=149.5
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHh-cCCCCeEEEecCCCCCcccccccccccccceee
Q 022463 25 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS 103 (297)
Q Consensus 25 ~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 103 (297)
.+...+++ +.++++++.+. .+++++|+.++..++.++ +++||+|+++..+|++...... ..|
T Consensus 38 ~~~~~~l~----~~la~~~~~~~-----~~~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~--------~~g 100 (393)
T 1mdo_A 38 GPKNQELE----AAFCRLTGNQY-----AVAVSSATAGMHIALMALGIGEGDEVITPSMTWVSTLNMIV--------LLG 100 (393)
T ss_dssp SHHHHHHH----HHHHHHHCCSE-----EEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHHHHHHH--------HTT
T ss_pred ChHHHHHH----HHHHHHhCCCc-----EEEecChHHHHHHHHHHcCCCCCCEEEeCCCccHhHHHHHH--------HCC
Confidence 35556666 88999999863 244455556877788888 8999999999988887754332 223
Q ss_pred eeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCCCC
Q 022463 104 IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 183 (297)
Q Consensus 104 ~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~~~ 183 (297)
..+ +.++.+++++.+|++++++.+++ ++++|++++ .+|.+.|+++|.++|+++|+++|+|++|+.|....+ .+.
T Consensus 101 ~~~--~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~-~~G~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~-~~~- 174 (393)
T 1mdo_A 101 ANP--VMVDVDRDTLMVTPEHIEAAITP-QTKAIIPVH-YAGAPADLDAIYALGERYGIPVIEDAAHATGTSYKG-RHI- 174 (393)
T ss_dssp CEE--EEECBCTTTCCBCHHHHHHHCCT-TEEEECCBC-GGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETT-EET-
T ss_pred CEE--EEEeccCCcCCCCHHHHHHhcCC-CceEEEEeC-CCCCcCCHHHHHHHHHHcCCeEEEECccccCCeECC-eec-
Confidence 334 34455545578999999999987 888888732 478889999999999999999999999998765432 222
Q ss_pred CCC-ccEEEecCC--ccCCCCCceEEEEe-cCchh--h-ccCCccchhhHHHHhhh--cccC-CCCCC-CchHHHHHHHH
Q 022463 184 FEY-ADVVTTTTH--KSLRGPRGAMIFFR-KGVKE--I-NKQGKEVFYDYEEKINQ--AVFP-GLQGG-PHNHTITGLAV 252 (297)
Q Consensus 184 ~~~-~D~~~~s~~--K~l~gp~gG~i~~~-~~~~~--~-~~~g~~~~~~~~~~~~~--~~~~-~~~~t-~~~~~~~al~~ 252 (297)
+ .|++++|+| |+++++++|+++.+ +++.. + ....+.....+...... ..+. ...|+ .....+.+ ..
T Consensus 175 --~~~d~~~~S~~k~K~l~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-a~ 251 (393)
T 1mdo_A 175 --GARGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNA-AI 251 (393)
T ss_dssp --TSSSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHH-HH
T ss_pred --CCCCeEEEeCCCCCccccccceEEEeCCHHHHHHHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHH-HH
Confidence 3 799999999 99988778999886 44321 1 11111100001100000 0000 00111 11122211 12
Q ss_pred HHHHHhhhcChhhHHHHhhhhHHHHHhhccCCC
Q 022463 253 ALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSE 285 (297)
Q Consensus 253 al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~ 285 (297)
++..+ . +++++.++.+++.+++.+.|++++
T Consensus 252 ~~~~l--~-~~~~~~~~~~~~~~~l~~~L~~~~ 281 (393)
T 1mdo_A 252 ALAQL--Q-KLDALNARRAAIAAQYHQAMADLP 281 (393)
T ss_dssp HHHHH--H-THHHHHHHHHHHHHHHHHHHHTSS
T ss_pred HHHHH--H-HHHHHHHHHHHHHHHHHHHHhcCC
Confidence 22222 2 567788888889999999998876
No 108
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.83 E-value=1.3e-19 Score=164.12 Aligned_cols=235 Identities=16% Similarity=0.166 Sum_probs=153.8
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHh-------cCCCCeEEEecCCCCCcccccccccc
Q 022463 24 GNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL-------LKPHDRIMALDLPHGGHLSHGYQTDT 96 (297)
Q Consensus 24 ~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~-------~~~gd~Vl~~~~~~~~~~~~~~~~~~ 96 (297)
..+...+++ +.+++++|++. .+++++|++++..++.++ +++||+|+++..+|++...++.
T Consensus 32 ~~~~~~~l~----~~la~~~~~~~-----~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~~~~~~~~~---- 98 (390)
T 3b8x_A 32 MGEYVKQYE----TQFAKTFGSKY-----AVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSWSTTYYPLQ---- 98 (390)
T ss_dssp SCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSCHHHHHHHH----
T ss_pred CChHHHHHH----HHHHHHHCCCc-----EEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCCcHHHHHHHH----
Confidence 346667777 88999999873 488889998887788888 7899999999999888865443
Q ss_pred cccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEehhhhccccc
Q 022463 97 KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVA 176 (297)
Q Consensus 97 ~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~ 176 (297)
..|..+ +.++.+++++.+|++++++.+++ +|++|++. +.+|...|+++|.++|+++|+++|+|++|+.|..+
T Consensus 99 ----~~g~~~--~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~-~~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~ 170 (390)
T 3b8x_A 99 ----QYGLRV--KFVDIDINTLNIDIESLKEAVTD-STKAILTV-NLLGNPNNFDEINKIIGGRDIILLEDNCESMGATF 170 (390)
T ss_dssp ----HTTCEE--EEECBCTTTCSBCHHHHHHHCCT-TEEEEEEE-CGGGCCCCHHHHHHHHTTSCCEEEEECTTCTTCEE
T ss_pred ----HcCCEE--EEEecCccccCcCHHHHHHHhCc-CCeEEEEE-CCccChhhHHHHHHHHHHcCCEEEEECcCcccCEE
Confidence 223223 44456645688999999999987 88888883 24688899999999999999999999999988766
Q ss_pred ccCCCCCCCCccEEEecC--CccCCCCCceEEEEecC-ch--hh-ccCCcc-chh--h-------HHHHh-hhccc--CC
Q 022463 177 AGVIPSPFEYADVVTTTT--HKSLRGPRGAMIFFRKG-VK--EI-NKQGKE-VFY--D-------YEEKI-NQAVF--PG 237 (297)
Q Consensus 177 ~~~~~~~~~~~D~~~~s~--~K~l~gp~gG~i~~~~~-~~--~~-~~~g~~-~~~--~-------~~~~~-~~~~~--~~ 237 (297)
+..... ...|+.++|. +|.+.++.||+++++++ +. .+ ...++. ... . ..... ....+ .+
T Consensus 171 -~~~~~g-~~~~~~~~s~~~~k~~~~g~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 248 (390)
T 3b8x_A 171 -NNKCAG-TFGLMGTFSSFYSNHIATMEGGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPG 248 (390)
T ss_dssp -TTEETT-SSSSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCC
T ss_pred -CCcccc-cccceEEEEccCCCCCccCCceEEEeCCHHHHHHHHHHHhcCCCccccccccccccccccccccccceeccc
Confidence 322210 0236666553 46576777899988873 32 11 121110 000 0 00000 00000 11
Q ss_pred C-CCCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 238 L-QGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 238 ~-~~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
. .++++....+++. +++ .++++.++.+++.+++.+.|++++.++
T Consensus 249 ~~~~~~~~~aa~~l~-~l~------~l~~~~~~~~~~~~~l~~~L~~~~~~~ 293 (390)
T 3b8x_A 249 YNVRPLEMSGAIGIE-QLK------KLPRFISVRRKNAEYFLDKFKDHPYLD 293 (390)
T ss_dssp CBCCCCHHHHHHHHH-HHH------HHHHHHHHHHHHHHHHHHHHTTCSSEE
T ss_pred cccCcCHHHHHHHHH-HHH------HHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 1 1133333333332 232 456788888999999999999887654
No 109
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.83 E-value=5.1e-20 Score=163.10 Aligned_cols=153 Identities=13% Similarity=0.133 Sum_probs=119.3
Q ss_pred HHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEecCCCCCcccccccc-cccccceeeeeeEeeeccc
Q 022463 35 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQT-DTKKISAVSIFFETMPYRL 113 (297)
Q Consensus 35 ~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~ 113 (297)
.++.+++++|++ + .+++++|+.++..++.+++++||+|+++..+|++....+..+ ... |..+..+ +.
T Consensus 3 l~~~la~~~g~~-~----~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~-----g~~~~~~--~~ 70 (331)
T 1pff_A 3 LEGKIAKLEHAE-A----CAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKF-----GVEVDFI--DM 70 (331)
T ss_dssp HHHHHHHHHTCS-E----EEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHT-----TCEEEEE--CT
T ss_pred HHHHHHHHhCCC-e----EEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhc-----CCEEEEe--CC
Confidence 348899999987 3 489999988887788888999999999998888875544221 111 2223233 22
Q ss_pred CCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHh-cCCEEEEehhhhcccccccCCCCCCCCccEE
Q 022463 114 NESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNK-QKAIMLADMAHISGLVAAGVIPSPFEYADVV 190 (297)
Q Consensus 114 ~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~-~g~~livD~a~~~g~~~~~~~~~~~~~~D~~ 190 (297)
.|++++++.+++ ++++|++ +++| +|.+.|+++|.++|++ +|+++|+|++|+.+....++ .. ++|++
T Consensus 71 ------~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~~~-~~---~~d~~ 139 (331)
T 1pff_A 71 ------AVPGNIEKHLKP-NTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNPL-DL---GVDIV 139 (331)
T ss_dssp ------TSTTHHHHTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCGG-GG---TCSEE
T ss_pred ------CCHHHHHHhhcC-CCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCChh-hc---CCcEE
Confidence 478899999986 8899988 7777 7999999999999999 99999999999988754333 22 68999
Q ss_pred EecCCccCCCCC---ceEEEEec
Q 022463 191 TTTTHKSLRGPR---GAMIFFRK 210 (297)
Q Consensus 191 ~~s~~K~l~gp~---gG~i~~~~ 210 (297)
++|+||++++|. +|++++++
T Consensus 140 ~~s~~K~~~~~~~r~~G~~~~~~ 162 (331)
T 1pff_A 140 VHSATKYINGHTDVVAGLVCSRA 162 (331)
T ss_dssp EEETTTTTSSSSSCCCEEEEECH
T ss_pred EEECccccCCCCCceEEEEEeCc
Confidence 999999998875 57888876
No 110
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.83 E-value=1.1e-19 Score=164.58 Aligned_cols=232 Identities=9% Similarity=0.055 Sum_probs=154.9
Q ss_pred HHH-HHHHHHHHHHHHcC--CCCCCCcceEEecCChH-HHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceee
Q 022463 28 IDM-AESLCQKRALEAFR--LDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS 103 (297)
Q Consensus 28 ~~~-~e~~~~~~la~~~g--~~~~~~~~~v~~~sG~~-~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 103 (297)
..+ +++.+.+++.+.+| ++++ .+++++|++ ++..++.+++++||+|+++...|++..... ...|
T Consensus 65 ~~~~lr~~la~~l~~~~g~~~~~~----~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~--------~~~g 132 (390)
T 1d2f_A 65 KNDEFLAAIAHWFSTQHYTAIDSQ----TVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAI--------EGNQ 132 (390)
T ss_dssp CCHHHHHHHHHHHHHHSCCCCCGG----GEEEESCHHHHHHHHHHHSSCTTCEEEEEESCCHHHHHHH--------HHTT
T ss_pred ChHHHHHHHHHHHHHhcCCCCCHH----HEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHH--------HHCC
Confidence 455 77666677777777 5554 388888884 776688888999999999997777654322 2223
Q ss_pred eeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCEEEEehhhhccccccc
Q 022463 104 IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAG 178 (297)
Q Consensus 104 ~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~livD~a~~~g~~~~~ 178 (297)
..+..++.+.+..++.+|++++++.+++.++++|++ +++| +|.+.| +++|.++|++||+++|+|++|+.......
T Consensus 133 ~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~ 212 (390)
T 1d2f_A 133 RTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQ 212 (390)
T ss_dssp CEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSS
T ss_pred CEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC
Confidence 334444432221134689999999997547888887 6777 787776 78999999999999999999986443211
Q ss_pred CCCCC---CC-C-ccEEEecCCccCC--CCCceEEEEecCchhhccCCccchhhHHHHhhhccc-CCCCCCCchHHHHHH
Q 022463 179 VIPSP---FE-Y-ADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVF-PGLQGGPHNHTITGL 250 (297)
Q Consensus 179 ~~~~~---~~-~-~D~~~~s~~K~l~--gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~t~~~~~~~al 250 (297)
...+ +. . .|. +.|++|+++ |.+.|+++++++ ++.+.+..... ....++++.+..+++
T Consensus 213 -~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~a~ 277 (390)
T 1d2f_A 213 -PHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIENS-------------SSRDAYLSALKGRDGLSSPSVLALTAH 277 (390)
T ss_dssp -CCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSH-------------HHHHHHHHHHHTTSCCCSCCHHHHHHH
T ss_pred -CCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECCH-------------HHHHHHHHHHhhhcccCCCCHHHHHHH
Confidence 1111 11 2 277 999999884 233489988642 23333332221 111235677777777
Q ss_pred HHHHHHHhhhcChhhHHHHhhhhHHHHHhhccC-CCCcc
Q 022463 251 AVALKQVCTLITFSHIHVFSLHVYPAFVSNQNN-SENIE 288 (297)
Q Consensus 251 ~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~-~~~~~ 288 (297)
.++++.. +. .+++++++.+++.+++.+.|++ ++.++
T Consensus 278 ~~~l~~~-~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 314 (390)
T 1d2f_A 278 IAAYQQG-AP-WLDALRIYLKDNLTYIADKMNAAFPELN 314 (390)
T ss_dssp HHHHHHC-HH-HHHHHHHHHHHHHHHHHHHHHHHCSSCC
T ss_pred HHHHhcC-HH-HHHHHHHHHHHHHHHHHHHHHhhCCCCE
Confidence 7777642 23 5677888888889999988887 66654
No 111
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.83 E-value=6.2e-20 Score=166.62 Aligned_cols=216 Identities=13% Similarity=0.076 Sum_probs=149.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeeeeE
Q 022463 29 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFE 107 (297)
Q Consensus 29 ~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 107 (297)
.++.+++++++++++|.+. +++++|+ .++..++.+++++||+|+++...|++...... ..|..+.
T Consensus 87 ~~~~~~l~~~la~~~g~~~------v~~~~ggt~a~~~~~~~~~~~gd~V~~~~p~~~~~~~~~~--------~~g~~~~ 152 (398)
T 3a2b_A 87 LDIHVELEEKLSAYVGKEA------AILFSTGFQSNLGPLSCLMGRNDYILLDERDHASIIDGSR--------LSFSKVI 152 (398)
T ss_dssp CHHHHHHHHHHHHHHTCSE------EEEESSHHHHHHHHHHHSSCTTCEEEEETTCCHHHHHHHH--------HSSSEEE
T ss_pred cHHHHHHHHHHHHHhCCCc------EEEECCHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHH--------HcCCceE
Confidence 3455556699999999752 6665555 67777888889999999999988877754322 2333333
Q ss_pred eeecccCCCCCcCCHHHHHHHhhhc---CCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccc---cC
Q 022463 108 TMPYRLNESTGYIDYDQLEKSATLF---RPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAA---GV 179 (297)
Q Consensus 108 ~v~~~~~~~~~~~d~~~l~~~l~~~---~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~---~~ 179 (297)
.+ +. +|++++++.+++. ++++|++ +++| +|.+.|+++|.++|++||+++|+|++|+.+.... ..
T Consensus 153 ~v--~~------~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~ 224 (398)
T 3a2b_A 153 KY--GH------NNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGT 224 (398)
T ss_dssp EE--CT------TCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCH
T ss_pred Ee--CC------CCHHHHHHHHHhhccCCceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCch
Confidence 33 32 5899999999864 6888888 6666 7999999999999999999999999998765321 11
Q ss_pred CC-CCC-CCccEEEecCCccCCCCCceEEEEecCchhhccCCccchhhHHHHhhhcccC-CCCCCCchHHHHHHHHHHHH
Q 022463 180 IP-SPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFP-GLQGGPHNHTITGLAVALKQ 256 (297)
Q Consensus 180 ~~-~~~-~~~D~~~~s~~K~l~gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~t~~~~~~~al~~al~~ 256 (297)
.. ... +++|+++.|+||+++ |.||+++++++ +.+.+.....+ ...++++....+++.++|+.
T Consensus 225 ~~~~~~~~~~di~~~s~sK~~~-~~GG~~~~~~~--------------~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~ 289 (398)
T 3a2b_A 225 ASHFGLNDDVDLIMGTFSKSLA-SLGGFVAGDAD--------------VIDFLKHNARSVMFSASMTPASVASTLKALEI 289 (398)
T ss_dssp HHHHTCGGGCSEEEEESSSTTC-SSCEEEEECHH--------------HHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHH
T ss_pred HhhcCCCcCCeEEEeccccccc-CCCcEEEeCHH--------------HHHHHHHhcccceecCCCCHHHHHHHHHHHHH
Confidence 00 000 136999999999885 66799998773 33333321100 11234455555566677877
Q ss_pred HhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 257 VCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 257 ~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
+. .+++++++.+++.+++.+.|+++
T Consensus 290 ~~---~~~~~~~~~~~~~~~l~~~L~~~ 314 (398)
T 3a2b_A 290 IQ---NEPEHIEKLWKNTDYAKAQLLDH 314 (398)
T ss_dssp HH---HCTHHHHHHHHHHHHHHHHHHHT
T ss_pred Hh---hCHHHHHHHHHHHHHHHHHHHhc
Confidence 53 35678888888888888888776
No 112
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.83 E-value=1.4e-19 Score=161.47 Aligned_cols=215 Identities=8% Similarity=0.013 Sum_probs=153.4
Q ss_pred HHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeeeeEeeecc
Q 022463 34 LCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 112 (297)
Q Consensus 34 ~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 112 (297)
+.++++++++++++++ +++++|+ .++..++.+++++||+|+++..+|++..... ...|..+ ++++
T Consensus 55 ~l~~~la~~~~~~~~~----i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~--------~~~g~~~--~~~~ 120 (354)
T 3ly1_A 55 MLGNKLAAHHQVEAPS----ILLTAGSSEGIRAAIEAYASLEAQLVIPELTYGDGEHFA--------KIAGMKV--TKVK 120 (354)
T ss_dssp HHHHHHHHHTTSCGGG----EEEESHHHHHHHHHHHHHCCTTCEEEEESSSCTHHHHHH--------HHTTCEE--EEEC
T ss_pred HHHHHHHHHhCCChHH----EEEeCChHHHHHHHHHHHhCCCCeEEECCCCchHHHHHH--------HHcCCEE--EEec
Confidence 3449999999988764 8888877 5777788888999999999998777664322 2233333 3445
Q ss_pred cCCCCCcCCHHHHHHHhhh-cCCcEEEE-cCCC-CCCcccHHHHHHHHHh--cCCEEEEehhhhcccccccCCCCCC---
Q 022463 113 LNESTGYIDYDQLEKSATL-FRPKLIVA-GASA-YARLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSPF--- 184 (297)
Q Consensus 113 ~~~~~~~~d~~~l~~~l~~-~~~~~v~~-~~~~-~G~~~~~~~i~~la~~--~g~~livD~a~~~g~~~~~~~~~~~--- 184 (297)
.+ .++.+|++++++.+++ .++++|++ +++| +|.+.|++++.++++. +|+++|+|++|+....... ....+
T Consensus 121 ~~-~~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~ 198 (354)
T 3ly1_A 121 ML-DNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAEFVNDPR-FRSISPMI 198 (354)
T ss_dssp CC-TTSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGCCCTT-CCCSHHHH
T ss_pred CC-CCCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhccccc-cCCHHHHh
Confidence 55 4588999999999983 28999998 7777 8999999988888887 9999999999875432211 11110
Q ss_pred --C-CccEEEecCCccCC--CCCceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHHHHHHHHhh
Q 022463 185 --E-YADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 259 (297)
Q Consensus 185 --~-~~D~~~~s~~K~l~--gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~ 259 (297)
. +.++++.|++|+++ |.+.|+++.++ ++.+.+.....+ .+++.+..+++.++|+..
T Consensus 199 ~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------------~~~~~~~~~~~~---~~~~~~~~~a~~~~l~~~-- 259 (354)
T 3ly1_A 199 TQGAENIILLKTFSKIHAMAGMRVGYAVAHP--------------TVIALMGRYVAG---EKINFSGVDAALASMNDS-- 259 (354)
T ss_dssp HTTCSSEEEEEESSSTTCCGGGCCEEEECCH--------------HHHHHHGGGTTC---SCCCHHHHHHHHHHTTCH--
T ss_pred hhcCCCEEEEeeChhhccChhhhheeeecCH--------------HHHHHHHHhcCC---CCCCHHHHHHHHHHhcCH--
Confidence 1 34588999999984 22339998876 445555443322 466777777777776633
Q ss_pred hcChhhHHHHhhhhHHHHHhhccCC
Q 022463 260 LITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 260 ~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
. .+++++++.+++.+++.+.|++.
T Consensus 260 ~-~~~~~~~~~~~~~~~l~~~l~~~ 283 (354)
T 3ly1_A 260 A-FITYSKKSNDVSRQILLKALEDL 283 (354)
T ss_dssp H-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHC
Confidence 2 57888888888999999888765
No 113
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.83 E-value=2.8e-19 Score=160.23 Aligned_cols=221 Identities=10% Similarity=0.016 Sum_probs=157.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeee
Q 022463 27 YIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 105 (297)
Q Consensus 27 ~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 105 (297)
...+++ +++++++++++++ +++++|+ .++..++.+++++||+|+++...|.+.... +...|..
T Consensus 68 ~~~~lr----~~la~~~~~~~~~----v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~--------~~~~g~~ 131 (363)
T 3ffh_A 68 WASSLR----KEVADFYQLEEEE----LIFTAGVDELIELLTRVLLDTTTNTVMATPTFVQYRQN--------ALIEGAE 131 (363)
T ss_dssp -CHHHH----HHHHHHHTCCGGG----EEEESSHHHHHHHHHHHHCSTTCEEEEEESSCHHHHHH--------HHHHTCE
T ss_pred chHHHH----HHHHHHhCCChhh----EEEeCCHHHHHHHHHHHHccCCCEEEEcCCChHHHHHH--------HHHcCCE
Confidence 345555 8899999988764 8888887 477668888899999999998776654332 2223333
Q ss_pred eEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhc--CCEEEEehhhhcccccccCCC
Q 022463 106 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAGVIP 181 (297)
Q Consensus 106 ~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~--g~~livD~a~~~g~~~~~~~~ 181 (297)
+..+ +.+ .++.+|++++++.+++ +|++|++ +++| +|.+.|++++.++++.+ |+++|+|++|+.... .. ..
T Consensus 132 ~~~v--~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~-~~-~~ 205 (363)
T 3ffh_A 132 VREI--PLL-QDGEHDLEGMLNAIDE-KTTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVT-PQ-PE 205 (363)
T ss_dssp EEEE--ECC-TTSCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCS-SC-CC
T ss_pred EEEe--cCC-CCCCcCHHHHHHhccc-CCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcC-cc-cc
Confidence 4334 455 3678999999999987 8999998 6777 89999999999999888 999999999984432 11 00
Q ss_pred CCC-----CCccEEEecCCccCCCC--CceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHHHHH
Q 022463 182 SPF-----EYADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVAL 254 (297)
Q Consensus 182 ~~~-----~~~D~~~~s~~K~l~gp--~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al 254 (297)
... ...++++.|++|+++.+ +.|++++++ ++.+.+..... ..+++.+..+++.+++
T Consensus 206 ~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------------~~~~~l~~~~~---~~~~~~~~~~~~~~~l 268 (363)
T 3ffh_A 206 KHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADK--------------EIIRQLNIVRP---PFNTTSIGQKLAIEAI 268 (363)
T ss_dssp CCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECH--------------HHHHHHHHTCC---SCCCBHHHHHHHHHHH
T ss_pred CHHHHhhcCCCEEEEeechhhhcCchhceeeeecCH--------------HHHHHHHHhCC---CCCCCHHHHHHHHHHh
Confidence 000 13347788999987422 229999876 44554444322 3456777777777777
Q ss_pred HHHhhhcChhhHHHHhhhhHHHHHhhccCCCCccc
Q 022463 255 KQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIEE 289 (297)
Q Consensus 255 ~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~ 289 (297)
+.. . .+++++++.+++.+++.+.|++.+.++.
T Consensus 269 ~~~--~-~~~~~~~~~~~~~~~l~~~l~~~~g~~~ 300 (363)
T 3ffh_A 269 KDQ--A-FIGECRTSNANGIKQYEAFAKRFEKVKL 300 (363)
T ss_dssp HCH--H-HHHHHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred cCH--H-HHHHHHHHHHHHHHHHHHHHhhCCCceE
Confidence 632 3 6788889999999999999988665543
No 114
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.83 E-value=8.2e-20 Score=165.53 Aligned_cols=228 Identities=12% Similarity=0.043 Sum_probs=152.8
Q ss_pred CCCchhHHHHHHHHHHHHHHHcCC--CCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccc
Q 022463 22 YGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKK 98 (297)
Q Consensus 22 ~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~ 98 (297)
|+......++++.+.+++.+.+|+ +++ .+++++|+ .++..++.+++++||+|+++..+|++.....
T Consensus 74 y~~~~g~~~lr~~la~~~~~~~g~~~~~~----~v~~~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~------- 142 (389)
T 1o4s_A 74 YTDPRGIYELREGIAKRIGERYKKDISPD----QVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQI------- 142 (389)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHTCCCCGG----GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHH-------
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCCCHH----HEEEecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHH-------
Confidence 444455678887766777666676 444 38888777 5777788888999999999998887764322
Q ss_pred cceeeeeeEeeecccCC-CCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCEEEEehhhhc
Q 022463 99 ISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYD---YERIRKVCNKQKAIMLADMAHIS 172 (297)
Q Consensus 99 ~~~~g~~~~~v~~~~~~-~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~livD~a~~~ 172 (297)
...|..+..+ +.++ +++.+|++++++.+++ ++++|++ +++| +|.+.| +++|.++|+++|+++|+|++|+.
T Consensus 143 -~~~g~~~~~v--~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~ 218 (389)
T 1o4s_A 143 -ILAGGTVNVV--ETFMSKNFQPSLEEVEGLLVG-KTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDS 218 (389)
T ss_dssp -HHTTCEEEEE--ECCGGGTTCCCHHHHHHTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred -HHcCCEEEEE--ecCCccCCCCCHHHHHHhccc-CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccc
Confidence 2233334344 4442 2467899999999987 8888888 6777 788877 88999999999999999999986
Q ss_pred cccccc---CCCCC-CCCccEEEecCCccCCCCC--ceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHH
Q 022463 173 GLVAAG---VIPSP-FEYADVVTTTTHKSLRGPR--GAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHT 246 (297)
Q Consensus 173 g~~~~~---~~~~~-~~~~D~~~~s~~K~l~gp~--gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~ 246 (297)
+..... +.... ..+.|+++.|++|+++.|. .|+++++++ +.+.+....... ..+.+.+.
T Consensus 219 ~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~~--------------~~~~l~~~~~~~-~~~~~~~~ 283 (389)
T 1o4s_A 219 LVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEK--------------VATAVSKIQSHT-TSCINTVA 283 (389)
T ss_dssp SBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCHH--------------HHHHHHHHHHHH-TCSCCHHH
T ss_pred cccCCCCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEeCHH--------------HHHHHHHHhhhc-ccCCCHHH
Confidence 544211 10000 0257999999999984333 499998773 333333221111 11223343
Q ss_pred HHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 247 ITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 247 ~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
..++.++| +. ++++++++.+++.+++.+.|+++
T Consensus 284 ~~a~~~~l----~~-~~~~~~~~~~~~~~~l~~~L~~~ 316 (389)
T 1o4s_A 284 QYAALKAL----EV-DNSYMVQTFKERKNFVVERLKKM 316 (389)
T ss_dssp HHHHHHHT----TC-CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHH----hc-cHHHHHHHHHHHHHHHHHHHHhc
Confidence 33333332 33 57888888888889988888775
No 115
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.83 E-value=1.3e-19 Score=162.93 Aligned_cols=224 Identities=10% Similarity=-0.012 Sum_probs=153.5
Q ss_pred CCCchhHHHHHHHHHHHHHHHcC--CCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccc
Q 022463 22 YGGNEYIDMAESLCQKRALEAFR--LDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKK 98 (297)
Q Consensus 22 ~~~~~~~~~~e~~~~~~la~~~g--~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~ 98 (297)
|+......++++.+.+++.+.+| ++++ .+++++|+ .++..++.+++++||+|+++..+|++.....
T Consensus 62 y~~~~~~~~l~~~la~~~~~~~g~~~~~~----~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~------- 130 (370)
T 2z61_A 62 YTDSRGILELREKISELYKDKYKADIIPD----NIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFI------- 130 (370)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHSSCCCCGG----GEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHH-------
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCCChh----hEEECCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHH-------
Confidence 44444567888776677766666 3444 38888877 5777788888999999999998887764432
Q ss_pred cceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhccccc
Q 022463 99 ISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVA 176 (297)
Q Consensus 99 ~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~ 176 (297)
...|..+..+ + +|++++++.+++ ++++|++ +++| +|.+.|++ |.++|++||+++|+|++|+.+...
T Consensus 131 -~~~g~~~~~v--~-------~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~-l~~~~~~~~~~li~De~~~~~~~~ 198 (370)
T 2z61_A 131 -RFLGAKPVFC--D-------FTVESLEEALSD-KTKAIIINSPSNPLGEVIDRE-IYEFAYENIPYIISDEIYNGLVYE 198 (370)
T ss_dssp -HHTTCEEEEE--C-------SSHHHHHHHCCS-SEEEEEEESSCTTTCCCCCHH-HHHHHHHHCSEEEEECTTTTCBSS
T ss_pred -HHcCCEEEEe--C-------CCHHHHHHhccc-CceEEEEcCCCCCcCcccCHH-HHHHHHHcCCEEEEEcchhhcccC
Confidence 2223223223 2 689999999987 8888888 6777 89999999 999999999999999999865442
Q ss_pred c---cCCCCC-CCCccEEEecCCccCCCCC--ceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHH
Q 022463 177 A---GVIPSP-FEYADVVTTTTHKSLRGPR--GAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGL 250 (297)
Q Consensus 177 ~---~~~~~~-~~~~D~~~~s~~K~l~gp~--gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al 250 (297)
. .+.... ..+.|+++.|+||+++.|. .|+++++++ +.+.+....... .++++.+..+++
T Consensus 199 g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~--------------~~~~~~~~~~~~-~~~~~~~~~~a~ 263 (370)
T 2z61_A 199 GKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISNDE--------------IIEAILKLQQNL-FISAPTISQYAA 263 (370)
T ss_dssp SCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCHH--------------HHHHHHHHHHHH-TSSSCHHHHHHH
T ss_pred CCCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECHH--------------HHHHHHHHHhhc-ccCCCHHHHHHH
Confidence 1 111110 1157899999999984333 499998874 333332221111 234566666666
Q ss_pred HHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 251 AVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 251 ~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
.++|+.+.+. .+++++++.++..+++.+.|+++
T Consensus 264 ~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 296 (370)
T 2z61_A 264 LKAFEKETER-EINSMIKEFDRRRRLVLKYVKDF 296 (370)
T ss_dssp GGGGSHHHHH-HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhccCHH-HHHHHHHHHHHHHHHHHHHHHHc
Confidence 6677652233 56778888888888888888775
No 116
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.83 E-value=5.6e-20 Score=167.20 Aligned_cols=156 Identities=13% Similarity=0.116 Sum_probs=117.6
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEecCCCCCcccccc-cccccccceeee
Q 022463 26 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGY-QTDTKKISAVSI 104 (297)
Q Consensus 26 ~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~-~~~~~~~~~~g~ 104 (297)
+..++++ +.+++++|++. .++++||+.++..++. ++++||+|+++..+|++.+..+. .+...+++
T Consensus 55 ~~~~~lr----~~la~~~g~~~-----~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~---- 120 (393)
T 1n8p_A 55 PNRENLE----RAVAALENAQY-----GLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVE---- 120 (393)
T ss_dssp HHHHHHH----HHHHHHTTCSE-----EEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSC----
T ss_pred hhHHHHH----HHHHHHhCCCc-----EEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcE----
Confidence 4455555 99999999873 4889999888777888 89999999999988876544321 12222322
Q ss_pred eeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhc----CCEEEEehhhhccccccc
Q 022463 105 FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQ----KAIMLADMAHISGLVAAG 178 (297)
Q Consensus 105 ~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~----g~~livD~a~~~g~~~~~ 178 (297)
+..+ +.+ | +++++++++ +|++|++ +++| +|.+.|+++|.++|+++ |+++|+|++|+.+... +
T Consensus 121 -v~~v--~~~------d-~~l~~~i~~-~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~-~ 188 (393)
T 1n8p_A 121 -TSFT--NDL------L-NDLPQLIKE-NTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYIS-N 188 (393)
T ss_dssp -CEEE--SSH------H-HHHHHHSCS-SEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-C
T ss_pred -EEEe--CCC------h-HHHHHhccc-CceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccC-C
Confidence 3333 332 6 889999986 8999999 6777 79999999999999999 9999999999887653 2
Q ss_pred CCCCCCCCccEEEecCCccCCCCC---ceEEEEec
Q 022463 179 VIPSPFEYADVVTTTTHKSLRGPR---GAMIFFRK 210 (297)
Q Consensus 179 ~~~~~~~~~D~~~~s~~K~l~gp~---gG~i~~~~ 210 (297)
.... ++|++++|+||+++++. ||++++++
T Consensus 189 ~~~~---~~di~~~S~sK~~g~~G~rigG~~~~~~ 220 (393)
T 1n8p_A 189 PLNF---GADIVVHSATKYINGHSDVVLGVLATNN 220 (393)
T ss_dssp GGGG---TCSEEEEETTTTTTCSSCCCCEEEEESC
T ss_pred HHHc---CCeEEEEECcccccCCCCceeEEEEeCC
Confidence 2222 78999999999886553 48888864
No 117
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.83 E-value=1.1e-19 Score=165.45 Aligned_cols=221 Identities=15% Similarity=0.082 Sum_probs=147.5
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceee
Q 022463 24 GNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS 103 (297)
Q Consensus 24 ~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 103 (297)
+++...++| +++++++|.+. .++++||++++.+ +.+++++||+|+++...|++.+....... ....|
T Consensus 65 ~~p~~~~l~----~~la~l~g~~~-----~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~---~~~~g 131 (400)
T 3nmy_A 65 HNPTRFAYE----RCVAALEGGTR-----AFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVR---RRTAG 131 (400)
T ss_dssp CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTH---HHHHC
T ss_pred CCHHHHHHH----HHHHHHhCCCC-----EEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhh---HhhcC
Confidence 446667777 88999999873 3888899877764 67789999999999988876654332110 01112
Q ss_pred eeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCC
Q 022463 104 IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP 181 (297)
Q Consensus 104 ~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~ 181 (297)
+..++++.+ |++++++++++ +|++|++ +++| +|.+.|+++|.++|++||+++|+|++++.+.....+.
T Consensus 132 --~~~~~v~~~------d~~~l~~~i~~-~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~~- 201 (400)
T 3nmy_A 132 --LDFSFVDLT------DPAAFKAAIRA-DTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQRPLS- 201 (400)
T ss_dssp --CEEEEECTT------SHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCGGG-
T ss_pred --eEEEEECCC------CHHHHHHHhcc-CCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChhh-
Confidence 222333332 89999999987 8999999 7777 7999999999999999999999999998655332211
Q ss_pred CCCCCccEEEecCCccCCCC---Cce-EEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHHHHHHHH
Q 022463 182 SPFEYADVVTTTTHKSLRGP---RGA-MIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQV 257 (297)
Q Consensus 182 ~~~~~~D~~~~s~~K~l~gp---~gG-~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~ 257 (297)
. ++|++++|++|+|+|| .|| +++.+++ ++.+.+...... ...+.+....+. +++.+
T Consensus 202 ~---g~div~~S~sK~l~g~g~~~gG~~vv~~~~-------------~~~~~l~~~~~~-~g~~~~~~~a~~---~l~~l 261 (400)
T 3nmy_A 202 L---GADLVVHSATKYLNGHSDMVGGIAVVGDNA-------------ELAEQMAFLQNS-IGGVQGPFDSFL---ALRGL 261 (400)
T ss_dssp G---TCSEEEEETTTTTTCSSSCCCEEEEECSCH-------------HHHHHHHHHHHH-HCCBCCHHHHHH---HHHHH
T ss_pred c---CCcEEEecCccccCCCCCcceeEEEEeCCH-------------HHHHHHHHHHHh-cCCCCCHHHHHH---HHHhH
Confidence 2 7899999999999887 457 5665553 233333221110 011222222222 23333
Q ss_pred hhhcChhhHHHHhhhhHHHHHhhccCCCCcccc
Q 022463 258 CTLITFSHIHVFSLHVYPAFVSNQNNSENIEED 290 (297)
Q Consensus 258 ~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~~ 290 (297)
. .++...++..+.+.++.+.|++.|.++.+
T Consensus 262 ~---~l~~r~~~~~~~a~~l~~~L~~~p~v~~V 291 (400)
T 3nmy_A 262 K---TLPLRMRAHCENALALAQWLETHPAIEKV 291 (400)
T ss_dssp T---THHHHHHHHHHHHHHHHHHHTTCTTEEEE
T ss_pred h---HHHHHHHHHHHHHHHHHHHHHcCCCEeEE
Confidence 2 34555666677788888888888877654
No 118
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.82 E-value=8.6e-20 Score=166.50 Aligned_cols=232 Identities=10% Similarity=0.010 Sum_probs=156.1
Q ss_pred cCCCchhHHHHHHHHHHHHHHHcCC--CCC-CCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccc
Q 022463 21 YYGGNEYIDMAESLCQKRALEAFRL--DPE-KWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDT 96 (297)
Q Consensus 21 ~~~~~~~~~~~e~~~~~~la~~~g~--~~~-~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~ 96 (297)
.|+......++++.+.+++.+.+|. +++ + +++++|+ .++..++.+++++||+|+++..+|++.....
T Consensus 57 ~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~----v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~~----- 127 (411)
T 2o0r_A 57 QYPPGPGSAPLRRAIAAQRRRHFGVDYDPETE----VLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVV----- 127 (411)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTS----EEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHH-----
T ss_pred CCCCCCCCHHHHHHHHHHHHHHcCCCCCCCce----EEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHH-----
Confidence 3444445678887777778777785 343 4 8888777 5777788888999999999998888764322
Q ss_pred cccceeeeeeEeeecccCCC--CCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCEEEEehh
Q 022463 97 KKISAVSIFFETMPYRLNES--TGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYD---YERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 97 ~~~~~~g~~~~~v~~~~~~~--~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~livD~a 169 (297)
...|..+..+ +.+++ ++.+|++++++.+++ ++++|++ +++| +|.+.| +++|.++|+++|+++|+|++
T Consensus 128 ---~~~g~~~~~v--~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~ 201 (411)
T 2o0r_A 128 ---AMAGAHRVTV--PLVPDGRGFALDADALRRAVTP-RTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEV 201 (411)
T ss_dssp ---HHTTCEEEEE--ECEEETTEEECCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred ---HHcCCEEEEe--eccccccCCCCCHHHHHHhhcc-CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 2223334344 34322 456999999999986 8899888 6777 787766 48999999999999999999
Q ss_pred hhcccccc----cCCCCC-CCCccEEEecCCccCCCCC--ceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCC
Q 022463 170 HISGLVAA----GVIPSP-FEYADVVTTTTHKSLRGPR--GAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGP 242 (297)
Q Consensus 170 ~~~g~~~~----~~~~~~-~~~~D~~~~s~~K~l~gp~--gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~ 242 (297)
|+.+.... .+.... ..+.|+++.|++|+++.|. .|+++++++ +.+.+....... ..+.
T Consensus 202 ~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~--------------~~~~l~~~~~~~-~~~~ 266 (411)
T 2o0r_A 202 YEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPAE--------------LIAGVRAAKQYL-SYVG 266 (411)
T ss_dssp TTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECCHH--------------HHHHHHHHHHHH-TSCC
T ss_pred ccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeCHH--------------HHHHHHHHHhhc-cCCC
Confidence 98654321 111100 0257999999999875333 499988763 333332211100 1223
Q ss_pred chHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 243 HNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 243 ~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
+.+..+++.++|+.. +. .+++++++.+++.+++.+.|++.
T Consensus 267 ~~~~~~a~~~~l~~~-~~-~~~~~~~~~~~~~~~l~~~L~~~ 306 (411)
T 2o0r_A 267 GAPFQPAVALALDTE-DA-WVAALRNSLRARRDRLAAGLTEI 306 (411)
T ss_dssp CTTHHHHHHHHHHHC-HH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhCC-hH-HHHHHHHHHHHHHHHHHHHHHHc
Confidence 345556666777654 33 57778888888889988888765
No 119
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.82 E-value=1.4e-19 Score=162.22 Aligned_cols=216 Identities=9% Similarity=-0.033 Sum_probs=153.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeeeeE
Q 022463 29 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFE 107 (297)
Q Consensus 29 ~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 107 (297)
.+++ +.+++++|+++++ +++++|+ .++..++.+++++||+|+++..+|.+.... +...|..+.
T Consensus 68 ~~lr----~~la~~~~~~~~~----v~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~--------~~~~g~~~~ 131 (365)
T 3get_A 68 IELK----STLAQKYKVQNEN----IIIGAGSDQVIEFAIHSKLNSKNAFLQAGVTFAMYEIY--------AKQCGAKCY 131 (365)
T ss_dssp HHHH----HHHHHHHTCCGGG----EEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHH--------HHHHTCEEE
T ss_pred HHHH----HHHHHHhCCCcce----EEECCCHHHHHHHHHHHHhCCCCEEEEeCCChHHHHHH--------HHHcCCEEE
Confidence 5566 8889999987764 8888887 477668888899999999998777665332 223343343
Q ss_pred eeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHH--hcCCEEEEehhhhcccc--cccCCC
Q 022463 108 TMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCN--KQKAIMLADMAHISGLV--AAGVIP 181 (297)
Q Consensus 108 ~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~--~~g~~livD~a~~~g~~--~~~~~~ 181 (297)
.+ +.+++++ +|++++++.+++ +|++|++ +++| +|.+.|++++.++++ ++|+++|+|++|+.... ......
T Consensus 132 ~v--~~~~~~~-~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~ 207 (365)
T 3get_A 132 KT--QSITHNL-DEFKKLYETHKD-EIKLIFLCLPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHL 207 (365)
T ss_dssp EC--SSSSCCH-HHHHHHHHHTTT-TEEEEEEESSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCC
T ss_pred EE--ecCCCCC-CCHHHHHHHhCC-CCCEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccc
Confidence 44 4433567 999999999986 8999999 7888 899999999999888 77999999999884431 111000
Q ss_pred CCC-----CCccEEEecCCccCC--CCCceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHHHHH
Q 022463 182 SPF-----EYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVAL 254 (297)
Q Consensus 182 ~~~-----~~~D~~~~s~~K~l~--gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al 254 (297)
... .+.++++.|++|+++ |.+.|++++++ ++.+.+.....+ .+++.+..+++.+++
T Consensus 208 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------------~~~~~~~~~~~~---~~~~~~~~~~~~~~l 270 (365)
T 3get_A 208 EPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANA--------------NIISAFYKLRAP---FNVSNLALKAAVAAM 270 (365)
T ss_dssp CHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEECH--------------HHHHHHHHHSCT---TCSCHHHHHHHHHHH
T ss_pred cHhHHhccCCCEEEEeecchHhcCcchheEEEEcCH--------------HHHHHHHHhcCC---CCcCHHHHHHHHHHh
Confidence 000 145688999999874 33349999866 344444433222 246667777777777
Q ss_pred HHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 255 KQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 255 ~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
+.. . .+++.+++.+++.+++.+.|++.
T Consensus 271 ~~~--~-~~~~~~~~~~~~~~~l~~~l~~~ 297 (365)
T 3get_A 271 DDD--E-FTEKTLENNFSQMELYKEFAKKH 297 (365)
T ss_dssp TCH--H-HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCH--H-HHHHHHHHHHHHHHHHHHHHHhC
Confidence 632 3 67888888999999999988876
No 120
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.82 E-value=1.5e-19 Score=165.84 Aligned_cols=158 Identities=16% Similarity=0.150 Sum_probs=119.6
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeee
Q 022463 26 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 105 (297)
Q Consensus 26 ~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 105 (297)
+...+++ +++++++|.+. .++++||+.++..++.+++++||+|+++..+|++...++.... ...|
T Consensus 58 ~~~~~l~----~~la~~~g~~~-----~v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~----~~~g-- 122 (421)
T 2ctz_A 58 PTVDVLE----KRLAALEGGKA-----ALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTL----KRLG-- 122 (421)
T ss_dssp HHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHH----HHTT--
T ss_pred hHHHHHH----HHHHHHhCCCc-----eEEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHH----HHcC--
Confidence 4455666 88999999874 3889999888877888889999999999999988766553211 1122
Q ss_pred eEeeec-ccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhh-hcccccccCCC
Q 022463 106 FETMPY-RLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAH-ISGLVAAGVIP 181 (297)
Q Consensus 106 ~~~v~~-~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~-~~g~~~~~~~~ 181 (297)
+..+.+ +.+ |++++++++++ +|++|++ +++| +|.+.|+++|.++|+++|+++|+|++| +.|.....+ .
T Consensus 123 ~~~~~~~~~~------d~~~l~~~i~~-~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g~~~~~~-~ 194 (421)
T 2ctz_A 123 IEVRFTSREE------RPEEFLALTDE-KTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGYLLRPL-A 194 (421)
T ss_dssp CEEEECCTTC------CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGGTSCCGG-G
T ss_pred CEEEEECCCC------CHHHHHHhhcc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccccccCCcc-c
Confidence 222333 322 89999999987 8999999 6777 799999999999999999999999999 777422111 1
Q ss_pred CCCCCccEEEecCCccCCCCCc--eEEEEe
Q 022463 182 SPFEYADVVTTTTHKSLRGPRG--AMIFFR 209 (297)
Q Consensus 182 ~~~~~~D~~~~s~~K~l~gp~g--G~i~~~ 209 (297)
. ++|++++|+||++++|.+ |++++.
T Consensus 195 ~---~~Di~~~s~~K~l~~~g~~~G~~~~~ 221 (421)
T 2ctz_A 195 W---GAALVTHSLTKWVGGHGAVIAGAIVD 221 (421)
T ss_dssp G---TCSEEEEETTTTTTCSSCCCCEEEEE
T ss_pred c---CCeEEEECCcccccCCCCcEEEEEEe
Confidence 2 789999999999988663 545553
No 121
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.82 E-value=1.2e-19 Score=165.34 Aligned_cols=234 Identities=16% Similarity=0.077 Sum_probs=156.1
Q ss_pred CCCchhHHHHHHHHHHHHHHHcCC--CCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccc
Q 022463 22 YGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKK 98 (297)
Q Consensus 22 ~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~ 98 (297)
|+......++++.+.+++.+.+|. +++ .+++++|+ .++..++.+++++||+|+++..+|++.....
T Consensus 74 y~~~~g~~~l~~~la~~l~~~~g~~~~~~----~v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~------- 142 (406)
T 1xi9_A 74 YGDSEGLPELRKAIVEREKRKNGVDITPD----DVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLV------- 142 (406)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCCCCGG----GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHH-------
T ss_pred CCCCCCcHHHHHHHHHHHHHhcCCCCCHH----HEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHH-------
Confidence 444445678887666777666654 444 38888876 5777788888999999999998877654322
Q ss_pred cceeeeeeEeeecccCC-CCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCEEEEehhhhc
Q 022463 99 ISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYD---YERIRKVCNKQKAIMLADMAHIS 172 (297)
Q Consensus 99 ~~~~g~~~~~v~~~~~~-~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~livD~a~~~ 172 (297)
...|..+..++ .++ +++.+|++++++.+++ ++++|++ +++| +|.+.| +++|.++|++||+++|+|++|+.
T Consensus 143 -~~~g~~~~~v~--~~~~~~~~~d~~~l~~~l~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~ 218 (406)
T 1xi9_A 143 -KFYGGKPVEYR--TIEEEDWQPDIDDIRKKITD-RTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDL 218 (406)
T ss_dssp -HHTTCEEEEEE--EEGGGTSEECHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTT
T ss_pred -HHcCCEEEEee--cCCCcCCcCCHHHHHHhhCc-CceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccc
Confidence 22333344444 432 3467899999999987 8888888 6777 787766 88999999999999999999876
Q ss_pred ccccccCCC-CCC-CCc-cEEEecCCccCCCC--CceEEE--Eec----CchhhccCCccchhhHHHHhhhcccCCCCCC
Q 022463 173 GLVAAGVIP-SPF-EYA-DVVTTTTHKSLRGP--RGAMIF--FRK----GVKEINKQGKEVFYDYEEKINQAVFPGLQGG 241 (297)
Q Consensus 173 g~~~~~~~~-~~~-~~~-D~~~~s~~K~l~gp--~gG~i~--~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t 241 (297)
+........ ..+ .+. |++++|++|+++.| +.|+++ .++ ++ .+.+....... .+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~l--------------~~~l~~~~~~~--~~ 282 (406)
T 1xi9_A 219 MTYEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEV--------------REAIDRLARIR--LC 282 (406)
T ss_dssp CBSSSCCCCHHHHCSSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHHH--------------HHHHHHHHHHT--CC
T ss_pred cccCCCCCCHHHcCCCceEEEEeccccccCCCccEEEEEEEecCchhHHHH--------------HHHHHHHHHhh--cC
Confidence 543110000 000 145 88999999998533 248888 555 32 22222111111 24
Q ss_pred CchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 242 PHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 242 ~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
++.+..+++.++|+.. .. .+++++++.+++.+++.+.|++++.++
T Consensus 283 ~~~~~~~a~~~~l~~~-~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~ 327 (406)
T 1xi9_A 283 PNTPAQFAAIAGLTGP-MD-YLKEYMKKLKERRDYIYKRLNEIPGIS 327 (406)
T ss_dssp SCSHHHHHHHHHHHSC-CH-HHHHHHHHHHHHHHHHHHHHHTSTTEE
T ss_pred CCHHHHHHHHHHHhCC-cH-HHHHHHHHHHHHHHHHHHHHHhCCCCe
Confidence 4556666767777532 23 467788888899999999998876654
No 122
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.82 E-value=1.1e-19 Score=166.76 Aligned_cols=237 Identities=13% Similarity=0.047 Sum_probs=157.9
Q ss_pred CCCchhHHHHHHHHHHHHHHHcC-----CCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCccccccccc
Q 022463 22 YGGNEYIDMAESLCQKRALEAFR-----LDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTD 95 (297)
Q Consensus 22 ~~~~~~~~~~e~~~~~~la~~~g-----~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~ 95 (297)
|.......+++ +.++++++ +++++ +++++|+ .++..++.+++++||+|+++..+|.++...
T Consensus 92 y~~~~g~~~lr----~~la~~~~~~~~~~~~~~----v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~~----- 158 (427)
T 3dyd_A 92 YAPSIGFLSSR----EEIASYYHCPEAPLEAKD----VILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTL----- 158 (427)
T ss_dssp CCCTTCCHHHH----HHHHHHHCBTTBCCCGGG----EEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHH-----
T ss_pred CCCCCCcHHHH----HHHHHHHhhcCCCCChHH----EEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH-----
Confidence 33344556777 77777777 55554 8888777 577778888899999999998777655332
Q ss_pred ccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCEEEEehhh
Q 022463 96 TKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYD---YERIRKVCNKQKAIMLADMAH 170 (297)
Q Consensus 96 ~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~livD~a~ 170 (297)
+...|..+..+++..+ +++.+|++.+++.+++ ++++|++ +++| +|.+.| +++|.++|+++|+++|+|+++
T Consensus 159 ---~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay 233 (427)
T 3dyd_A 159 ---AESMGIEVKLYNLLPE-KSWEIDLKQLEYLIDE-KTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIY 233 (427)
T ss_dssp ---HHHTTCEEEEEEEEGG-GTTEECHHHHHSSCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTT
T ss_pred ---HHHcCCEEEEEecccc-cCCCCCHHHHHHHhcc-CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCc
Confidence 2223333444443322 4568899999999987 7888888 7877 899888 899999999999999999998
Q ss_pred hcccccccCCCCCCC--Cc---cEEEecCCccCCCCC--ceEEEEecCch-hhccCCccchhhHHHHhhhcccCCCCCCC
Q 022463 171 ISGLVAAGVIPSPFE--YA---DVVTTTTHKSLRGPR--GAMIFFRKGVK-EINKQGKEVFYDYEEKINQAVFPGLQGGP 242 (297)
Q Consensus 171 ~~g~~~~~~~~~~~~--~~---D~~~~s~~K~l~gp~--gG~i~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~t~ 242 (297)
+......... .++. .. .+++.|++|.++.|. .|+++++++.. .. ..+.+.+...... ..++
T Consensus 234 ~~~~~~g~~~-~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~--------~~i~~~l~~~~~~--~~~~ 302 (427)
T 3dyd_A 234 GDMVFSDCKY-EPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFG--------NEIRDGLVKLSQR--ILGP 302 (427)
T ss_dssp TTCBCSSCCC-CCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSH--------HHHHHHHHHHHHH--HCCS
T ss_pred hhhccCCCcC-ccHHHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhhH--------HHHHHHHHHHHhc--cCCC
Confidence 7533221111 0110 12 266789999764433 38888876310 00 0122222211101 2356
Q ss_pred chHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 243 HNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 243 ~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
+.+..+++.++|+..... .+++..++.+++++++.+.|++++.++
T Consensus 303 ~~~~~~a~~~~L~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~g~~ 347 (427)
T 3dyd_A 303 CTIVQGALKSILCRTPGE-FYHNTLSFLKSNADLCYGALAAIPGLR 347 (427)
T ss_dssp CHHHHHHHHHHHHHSCHH-HHHHHHHHHHHHHHHHHHHHHHSTTEE
T ss_pred CHHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 777777878888764444 678888888999999999998887664
No 123
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.82 E-value=2.3e-20 Score=172.01 Aligned_cols=237 Identities=15% Similarity=0.080 Sum_probs=157.1
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChH-HHHHHHHHh-cCCCCeEEEecCCCCCccccccccccccccee
Q 022463 25 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAV 102 (297)
Q Consensus 25 ~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~-~~~~~~~~~-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~ 102 (297)
.+...++.++.++++++++|+++++ +.+++|++ ++.+++.++ +++||+|+++..+|++...++... ++..
T Consensus 103 ~~g~~~~~~~~~~~la~~~g~~~~~----i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~----a~~~ 174 (438)
T 1wyu_A 103 SQGVLQATFEYQTMIAELAGLEIAN----ASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAY----LEAV 174 (438)
T ss_dssp CHHHHHHHHHHHHHHHHHHTSSEEC----SCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHH----HHHT
T ss_pred hhhHHHHHHHHHHHHHHHhCCCccc----eEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHH----HHHC
Confidence 3455677778889999999998653 67777775 334343333 689999999999998886555321 1122
Q ss_pred eeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCCCCCcccHHHHHHHHHhcCCEEEEehh-hhcccccccCC
Q 022463 103 SIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASAYARLYDYERIRKVCNKQKAIMLADMA-HISGLVAAGVI 180 (297)
Q Consensus 103 g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~~G~~~~~~~i~~la~~~g~~livD~a-~~~g~~~~~~~ 180 (297)
|.+++.++ . +++.+|+++ +++ +|++|++ +++.+|.+.|+++|.++|+++|+++++|.. ++.|....+ .
T Consensus 175 G~~v~~v~--~--~~~~~d~~~----i~~-~t~~v~i~~pn~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~~~~-~ 244 (438)
T 1wyu_A 175 GAKLLTLP--L--EGGRTPLPE----VGE-EVGAVVVQNPNFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVLKPP-G 244 (438)
T ss_dssp TCEEEEEC--C--BTTBCCCCC----CCT-TEEEEEEESSCTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCCH-H
T ss_pred CCEEEEEc--C--cCCccCHHH----hCC-CeEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechhhccCcCCC-c
Confidence 33343443 3 245777766 665 8899988 663389999999999999999999997755 556654322 1
Q ss_pred CCCCCCccEEEecCCc-----cCCCCCceEEEEecCchhhc---cCCccchh----hH-------HHHhhhcccCCCCCC
Q 022463 181 PSPFEYADVVTTTTHK-----SLRGPRGAMIFFRKGVKEIN---KQGKEVFY----DY-------EEKINQAVFPGLQGG 241 (297)
Q Consensus 181 ~~~~~~~D~~~~s~~K-----~l~gp~gG~i~~~~~~~~~~---~~g~~~~~----~~-------~~~~~~~~~~~~~~t 241 (297)
.+ ++|++++|++| |++||+.|+++++++...++ ..|..... .+ ....... .++
T Consensus 245 ~~---g~D~~~~s~kk~~~~~~~~Gp~~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~-----~~t 316 (438)
T 1wyu_A 245 AY---GADIAVGDGQSLGLPMGFGGPHFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRA-----KAK 316 (438)
T ss_dssp HH---TCSEEEEECTTTTCCCGGGCSCCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGG-----GSS
T ss_pred cC---CCCEEEECCcccCCCccCCCCCeeEEEEcHHHHHhCCCceeccccccCCCcceeeeccccccccchh-----ccc
Confidence 12 68999999777 78899559999988753221 11111000 00 0000000 223
Q ss_pred Cch---HHHHHHHHH--HHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 242 PHN---HTITGLAVA--LKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 242 ~~~---~~~~al~~a--l~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
+++ ..++++.++ +..+... |++++.++...+++++.+.|+++++++
T Consensus 317 ~~~~~~~~~~a~~aa~~l~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~~g~~ 367 (438)
T 1wyu_A 317 SNITTNAQLTALMGAMYLAALGPE-GLREVALKSVEMAHKLHALLLEVPGVR 367 (438)
T ss_dssp CCCCSCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHTTSTTCE
T ss_pred CCccchHHHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 333 455555555 7777766 899999999999999999999987665
No 124
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.82 E-value=2e-19 Score=163.83 Aligned_cols=231 Identities=12% Similarity=0.028 Sum_probs=155.5
Q ss_pred CCCchhHHHHHHHHHHHHHHHcCCC--C-CCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCccccccccccc
Q 022463 22 YGGNEYIDMAESLCQKRALEAFRLD--P-EKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTK 97 (297)
Q Consensus 22 ~~~~~~~~~~e~~~~~~la~~~g~~--~-~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~ 97 (297)
|+......++++.+.+++++.+|++ + ++ +++++|+ .++..++++++++||+|+++...|++.....
T Consensus 81 y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~----v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~------ 150 (404)
T 2o1b_A 81 YGAFHGKEAFKQAIVDFYQRQYNVTLDKEDE----VCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGV------ 150 (404)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCCCCTTTS----EEEESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHHHH------
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCCCCccc----EEEcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH------
Confidence 3333456778866666666666875 2 33 8888887 4777788888999999999998877764322
Q ss_pred ccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCEEEEehhhhc
Q 022463 98 KISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYD---YERIRKVCNKQKAIMLADMAHIS 172 (297)
Q Consensus 98 ~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~livD~a~~~ 172 (297)
...|..+..+ +.+++++.+|++++++.+++ ++++|++ +++| +|.+.| +++|.++|+++|+++|+|++|+.
T Consensus 151 --~~~g~~~~~v--~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~ 225 (404)
T 2o1b_A 151 --LLADGKPVPL--NLEPPHYLPDWSKVDSQIID-KTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGA 225 (404)
T ss_dssp --HHTTCEEEEE--ECCTTTCCCCGGGSCHHHHH-HEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTT
T ss_pred --HHCCCEEEEe--ccCcccCcCCHHHHHHhhcc-CceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchh
Confidence 2223334334 44433456899999999976 7899988 6777 787775 67899999999999999999976
Q ss_pred ccccc---cCCCCC-CCCccEEEecCCccCCCC--CceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHH
Q 022463 173 GLVAA---GVIPSP-FEYADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHT 246 (297)
Q Consensus 173 g~~~~---~~~~~~-~~~~D~~~~s~~K~l~gp--~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~ 246 (297)
..... .+.... ..+.|+++.|++|+++.| +.|+++++++ +.+.+...... ...+++.+.
T Consensus 226 ~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~--------------~~~~l~~~~~~-~~~~~~~~~ 290 (404)
T 2o1b_A 226 FGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKD--------------MIQALKKYQTH-TNAGMFGAL 290 (404)
T ss_dssp CBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEECHH--------------HHHHHHHHHHH-HCCCCCHHH
T ss_pred cccCCCCCChhhcCCCCCCEEEEEecchhccCchhheEeEecCHH--------------HHHHHHHHHhh-ccCCCCHHH
Confidence 44311 111110 003568899999998433 3499888773 33333322111 123456666
Q ss_pred HHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 247 ITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 247 ~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
.+++.++|+.. +. .+++++++.+++.+++.+.|++.
T Consensus 291 ~~a~~~~l~~~-~~-~~~~~~~~~~~~~~~l~~~L~~~ 326 (404)
T 2o1b_A 291 QDAAIYALNHY-DD-FLEEQSNVFKTRRDRFEAMLAKA 326 (404)
T ss_dssp HHHHHHHHHHC-HH-HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcC-HH-HHHHHHHHHHHHHHHHHHHHHhc
Confidence 77766777653 23 57778888888888888888776
No 125
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.82 E-value=1.1e-19 Score=164.85 Aligned_cols=160 Identities=16% Similarity=0.123 Sum_probs=122.3
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeee
Q 022463 25 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 104 (297)
Q Consensus 25 ~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 104 (297)
++...+++ +++++++|.+. .++++||+.++..++.+++++||+|+++..+|++....+... ....|.
T Consensus 58 ~~~~~~l~----~~la~~~g~~~-----~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~----~~~~g~ 124 (389)
T 3acz_A 58 NPTVEQFE----EMVCSIEGAAG-----SAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHW----LPRFGI 124 (389)
T ss_dssp CHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHH----HHHTTC
T ss_pred ChHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHH----HHHcCC
Confidence 45566666 89999999873 488889988887788888999999999998888765543211 111222
Q ss_pred eeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCCC
Q 022463 105 FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 182 (297)
Q Consensus 105 ~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~~ 182 (297)
.+..+ +. .|++++++.+++ ++++|++ +++| +|.+.|+++|.++|+++|+++|+|++++.+.....+. .
T Consensus 125 ~~~~v--~~------~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~~~~~~~-~ 194 (389)
T 3acz_A 125 EVDLI--DT------SDVEKVKAAWKP-NTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPCFLKPLE-L 194 (389)
T ss_dssp EEEEE--CT------TCHHHHHHTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCCGGG-T
T ss_pred EEEEE--CC------CCHHHHHHhcCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccccCccc-c
Confidence 23233 32 389999999987 8899998 6777 7999999999999999999999999998775321111 2
Q ss_pred CCCCccEEEecCCccCCCCCc---eEEEEec
Q 022463 183 PFEYADVVTTTTHKSLRGPRG---AMIFFRK 210 (297)
Q Consensus 183 ~~~~~D~~~~s~~K~l~gp~g---G~i~~~~ 210 (297)
++|++++|++|++++|.+ |++++++
T Consensus 195 ---~~di~~~S~sK~~~~~~~~~~G~v~~~~ 222 (389)
T 3acz_A 195 ---GADIALHSVSKYINGHGDVIGGVSSAKT 222 (389)
T ss_dssp ---TCSEEEEETTTTTTCSSCCCCEEEEESS
T ss_pred ---CCeEEEECChhhccCCCCceeEEEEECc
Confidence 789999999999988764 8888877
No 126
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.82 E-value=3.5e-19 Score=161.16 Aligned_cols=230 Identities=11% Similarity=0.042 Sum_probs=152.3
Q ss_pred CCCchhHHHHHHHHHHHHHHHcCC--CCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccc
Q 022463 22 YGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKK 98 (297)
Q Consensus 22 ~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~ 98 (297)
|+......++++.+.+++.+.+|+ +++ .|++++|+ +++..++.+++++||+|+++.++|++....
T Consensus 64 y~~~~g~~~lr~~ia~~~~~~~g~~~~~~----~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~-------- 131 (385)
T 1b5p_A 64 YAPPAGIPELREALAEKFRRENGLSVTPE----ETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEM-------- 131 (385)
T ss_dssp CCCTTCCHHHHHHHHHHHHHTTCCCCCGG----GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHH--------
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCCChH----HEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH--------
Confidence 443445678887777777776675 444 38888887 477668888899999999999887665432
Q ss_pred cceeeeeeEeeecccCC-CCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCEEEEehhhhc
Q 022463 99 ISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYD---YERIRKVCNKQKAIMLADMAHIS 172 (297)
Q Consensus 99 ~~~~g~~~~~v~~~~~~-~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~livD~a~~~ 172 (297)
+...|..+..+ +.++ +++.+|++++++++++ ++++|++ +++| +|.+.+ +++|.++|++||+++|+|++++.
T Consensus 132 ~~~~g~~~~~v--~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 208 (385)
T 1b5p_A 132 VRFAGGVVVEV--ETLPEEGFVPDPERVRRAITP-RTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEH 208 (385)
T ss_dssp HHHTTCEEEEE--ECCGGGTTCCCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTT
T ss_pred HHHcCCEEEEe--ecCcccCCCCCHHHHHHhcCC-CCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchh
Confidence 22233334344 4443 3567999999999987 7888888 7888 898766 78999999999999999999875
Q ss_pred ccccccCCCCCCC----CccEEEecCCccCCCCC--ceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHH
Q 022463 173 GLVAAGVIPSPFE----YADVVTTTTHKSLRGPR--GAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHT 246 (297)
Q Consensus 173 g~~~~~~~~~~~~----~~D~~~~s~~K~l~gp~--gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~ 246 (297)
..... ...++. +.++++.|++|+++.|. .|+++++++ +.+.+....... ..+++.+.
T Consensus 209 ~~~~~--~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~--------------~~~~l~~~~~~~-~~~~~~~~ 271 (385)
T 1b5p_A 209 LLYEG--EHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKE--------------VIKAMASVSRQS-TTSPDTIA 271 (385)
T ss_dssp CBSSS--CCCCGGGTCTTTEEEEEESTTTTTCGGGCCEEEECCHH--------------HHHHHHHHHHTT-TCSCCHHH
T ss_pred cccCC--CCCCHHHcCCCCEEEEEechhhcCCcccceEEEEeCHH--------------HHHHHHHHHhhc-cCCCCHHH
Confidence 43311 111111 34788999999874333 499998763 333333322121 22344555
Q ss_pred HHHHHHHHHH--HhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 247 ITGLAVALKQ--VCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 247 ~~al~~al~~--~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
..++.++|+. .... .+++.+++.++..+++.+.|+++
T Consensus 272 ~~a~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 310 (385)
T 1b5p_A 272 QWATLEALTNQEASRA-FVEMAREAYRRRRDLLLEGLTAL 310 (385)
T ss_dssp HHHHHHHHHCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcchH-HHHHHHHHHHHHHHHHHHHHHHC
Confidence 5555556643 0122 45667777777788887777754
No 127
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.82 E-value=1.3e-19 Score=161.47 Aligned_cols=224 Identities=13% Similarity=0.122 Sum_probs=143.6
Q ss_pred HHHHHHHHHHHcCCCCCCCcceEEec-CChHHHHHHHHHhcCCCCeEEEecCCCCCccccccccccccccee--eeeeEe
Q 022463 32 ESLCQKRALEAFRLDPEKWGVNVQSL-SGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAV--SIFFET 108 (297)
Q Consensus 32 e~~~~~~la~~~g~~~~~~~~~v~~~-sG~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~ 108 (297)
.+..++++++++| .+. .++++ +|+.++..++.+++++||+|+++...|.+..... .+... |..+..
T Consensus 45 ~~~l~~~la~~~g-~~~----~v~~~~~gt~a~~~al~~~~~~gd~vi~~~~~~~~~~~~~------~~~~~~~g~~~~~ 113 (356)
T 1v72_A 45 TAQVKRKFCEIFE-RDV----EVFLVPTGTAANALCLSAMTPPWGNIYCHPASHINNDECG------APEFFSNGAKLMT 113 (356)
T ss_dssp HHHHHHHHHHHHT-SCC----EEEEESCHHHHHHHHHHTSCCTTEEEEECTTSHHHHSSTT------HHHHHTTSCEEEE
T ss_pred HHHHHHHHHHHhC-CCC----cEEEeCCccHHHHHHHHHhcCCCCEEEEcCccchhhhhch------HHHHHhCCcEEEE
Confidence 3344499999999 332 35555 4456877788888899999999887776654330 01122 333433
Q ss_pred eecccCCCCCcCCHHHHHH-Hhhhc------CCcEEEE-cCCCCCC---cccHHHHHHHHHhcCCEEEEehhhhcccc-c
Q 022463 109 MPYRLNESTGYIDYDQLEK-SATLF------RPKLIVA-GASAYAR---LYDYERIRKVCNKQKAIMLADMAHISGLV-A 176 (297)
Q Consensus 109 v~~~~~~~~~~~d~~~l~~-~l~~~------~~~~v~~-~~~~~G~---~~~~~~i~~la~~~g~~livD~a~~~g~~-~ 176 (297)
+ +.+ ++.+|++++++ ++++. +|++|++ +++|+|. ..++++|.++|++||+++|+|++|+.+.. .
T Consensus 114 v--~~~--~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~ 189 (356)
T 1v72_A 114 V--DGP--AAKLDIVRLRERTREKVGDVHTTQPACVSITQATEVGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVS 189 (356)
T ss_dssp C--CCG--GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCTTSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHH
T ss_pred e--cCC--CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCCCCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhcc
Confidence 3 443 36899999999 88752 5788888 6667897 55678999999999999999999875422 1
Q ss_pred ccCCCCCC---CCccEEEecCCccCCCCCc-eEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHHH
Q 022463 177 AGVIPSPF---EYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAV 252 (297)
Q Consensus 177 ~~~~~~~~---~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~ 252 (297)
.+.....+ .++|++++|+||+ ++|.| |+++.++++ .+.+...... .++.......++..
T Consensus 190 ~~~~~~~~~~~~~~d~~~~s~sK~-g~~~G~g~~~~~~~~--------------~~~~~~~~~~--~~~~~~~~~~~~~~ 252 (356)
T 1v72_A 190 LGCSPAEMTWKAGVDALSFGATKN-GVLAAEAIVLFNTSL--------------ATEMSYRRKR--AGHLSSKMRFLSAQ 252 (356)
T ss_dssp HTCCTTTTTGGGTCCEEEECCGGG-TCSSCEEEEESSGGG--------------HHHHHHHHHH--TTCCCSSTHHHHHH
T ss_pred CCCCHHHhhhhhcCCEEEEecccC-CCcCccEEEEECHHH--------------HhhHHHHhhc--cCchhhhHHHHHHH
Confidence 11111111 1689999999999 67888 788887643 2222111000 11111111223334
Q ss_pred HHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 253 ALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 253 al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
+++.+.+. .++++.++..++.+++.+.|++++.++
T Consensus 253 ~~~~l~~~-~~~~~~~~~~~~~~~l~~~L~~~~g~~ 287 (356)
T 1v72_A 253 IDAYLTDD-LWLRNARKANAAAQRLAQGLEGLGGVE 287 (356)
T ss_dssp HHHHTSTT-HHHHHHHHHHHHHHHHHHHHTTCTTEE
T ss_pred HHHHHHhh-hHHHHHHHHHHHHHHHHHHHhhCCCcE
Confidence 45555543 566677888889999999998876654
No 128
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.82 E-value=2.6e-19 Score=164.14 Aligned_cols=222 Identities=14% Similarity=0.136 Sum_probs=147.7
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceee
Q 022463 25 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS 103 (297)
Q Consensus 25 ~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 103 (297)
.+...+++ +.++++++.+. +++++|+ .++..++.++ .+||+|+++..+|++..... ...|
T Consensus 51 ~~~~~~l~----~~la~~~~~~~------v~~~~ggt~al~~~l~~l-~~gd~Vlv~~~~~~~~~~~~--------~~~G 111 (424)
T 2po3_A 51 GPLVREFE----ERVAGLAGVRH------AVATCNATAGLQLLAHAA-GLTGEVIMPSMTFAATPHAL--------RWIG 111 (424)
T ss_dssp CHHHHHHH----HHHHHHHTSSE------EEEESCHHHHHHHHHHHH-TCCSEEEEESSSCTHHHHHH--------HHTT
T ss_pred CHHHHHHH----HHHHHHhCCCe------EEEeCCHHHHHHHHHHHc-CCCCEEEECCCccHHHHHHH--------HHcC
Confidence 45666666 88889998752 6666666 5777677766 47899999998888875432 2233
Q ss_pred eeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCCCC
Q 022463 104 IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 183 (297)
Q Consensus 104 ~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~~~ 183 (297)
..+ +.++.+++++.+|++++++.+++ ++++|+++. .+|...++++|.++|+++|+++|+|++|+.|....+ ...
T Consensus 112 ~~~--~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~-~tG~~~~l~~i~~la~~~~~~li~Dea~~~g~~~~~-~~~- 185 (424)
T 2po3_A 112 LTP--VFADIDPDTGNLDPDQVAAAVTP-RTSAVVGVH-LWGRPCAADQLRKVADEHGLRLYFDAAHALGCAVDG-RPA- 185 (424)
T ss_dssp CEE--EEECBCTTTSSBCHHHHGGGCCT-TEEEEEEEC-GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETT-EET-
T ss_pred CEE--EEEecCCCcCCcCHHHHHHhhCc-CCcEEEEEC-CCCCcCCHHHHHHHHHHcCCEEEEECccccCCeECC-eec-
Confidence 333 44455645678999999999987 889888832 478899999999999999999999999987665321 111
Q ss_pred CCCccEEEecCC--ccCCCCCceEEEEecCchhhccCCccchhhHHHHhhhcccC--------CCCCCC-chHHHHHHHH
Q 022463 184 FEYADVVTTTTH--KSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFP--------GLQGGP-HNHTITGLAV 252 (297)
Q Consensus 184 ~~~~D~~~~s~~--K~l~gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--------~~~~t~-~~~~~~al~~ 252 (297)
....|++++|++ |+++++++|+++.+++ ++.+.+...... ...+.. ....+ +...
T Consensus 186 ~~~~di~~~S~sk~K~l~~~~~G~~v~~~~-------------~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~-~aa~ 251 (424)
T 2po3_A 186 GSLGDAEVFSFHATKAVNAFEGGAVVTDDA-------------DLAARIRALHNFGFDLPGGSPAGGTNAKMSEA-AAAM 251 (424)
T ss_dssp TSSSSEEEEECCTTSSSCCSSCEEEEESCH-------------HHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHH-HHHH
T ss_pred ccccCEEEEeCCCCCCccCCCCeEEEeCCH-------------HHHHHHHHHHhcCccccccccccCcCCCcCHH-HHHH
Confidence 013588888887 9998877799988732 122222111000 001111 11112 1222
Q ss_pred HHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 253 ALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 253 al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
++..+ . +++.+.++.+.+.+++.+.|++++.++
T Consensus 252 ~l~~~--~-~~~~~~~~~~~~~~~l~~~L~~~~g~~ 284 (424)
T 2po3_A 252 GLTSL--D-AFPEVIDRNRRNHAAYREHLADLPGVL 284 (424)
T ss_dssp HHHHH--H-HHHHHHHHHHHHHHHHHHHTCSCTTEE
T ss_pred HHHHH--H-HHHHHHHHHHHHHHHHHHHhccCCCcc
Confidence 33222 2 567788889999999999999886543
No 129
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.82 E-value=3.5e-19 Score=161.30 Aligned_cols=229 Identities=11% Similarity=-0.019 Sum_probs=151.6
Q ss_pred CCCchhHHHHHHHHHHHHHHHcCC--CCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccc
Q 022463 22 YGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKK 98 (297)
Q Consensus 22 ~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~ 98 (297)
|+......++++.+.+++.+.+|. +++ .+++++|+ .++..++.+++++||+|+++...|++.....
T Consensus 64 y~~~~g~~~lr~~ia~~~~~~~g~~~~~~----~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~------- 132 (391)
T 3h14_A 64 YTVALGLPALRQRIARLYGEWYGVDLDPG----RVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQIL------- 132 (391)
T ss_dssp -----CCHHHHHHHHHHHHHHHCCCCCGG----GEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHH-------
T ss_pred CCCCCChHHHHHHHHHHHHHHhCCCCCHH----HEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHH-------
Confidence 333344677887777777777774 454 38888887 5777788889999999999987777664322
Q ss_pred cceeeeeeEeeecccCC-CCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCEEEEehhhhc
Q 022463 99 ISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYD---YERIRKVCNKQKAIMLADMAHIS 172 (297)
Q Consensus 99 ~~~~g~~~~~v~~~~~~-~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~livD~a~~~ 172 (297)
...|..+..+ +.++ .++.+|++++++. ++++|++ +++| +|.+.| +++|.++|++||+++|+|++|+.
T Consensus 133 -~~~g~~~~~v--~~~~~~~~~~d~~~l~~~----~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~ 205 (391)
T 3h14_A 133 -RALGLVPVDL--PTAPENRLQPVPADFAGL----DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHG 205 (391)
T ss_dssp -HHTTCEEEEE--ECCGGGTTSCCHHHHTTS----CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTT
T ss_pred -HHcCCEEEEe--ecCcccCCCCCHHHHHhc----CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchh
Confidence 2233334444 4442 2357899988876 6898888 7777 788877 78899999999999999999875
Q ss_pred ccccccC-CCCCCCCccEEEecCCccCC--CCCceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHH
Q 022463 173 GLVAAGV-IPSPFEYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITG 249 (297)
Q Consensus 173 g~~~~~~-~~~~~~~~D~~~~s~~K~l~--gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a 249 (297)
....... ........++++.|++|+++ |.+.|+++.+++ +.+.+....... ..+++.+..++
T Consensus 206 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~--------------~~~~~~~~~~~~-~~~~~~~~~~a 270 (391)
T 3h14_A 206 IEYEAKAVTALELTDECYVINSFSKYFSMTGWRVGWMVVPED--------------QVRVVERIAQNM-FICAPHASQVA 270 (391)
T ss_dssp CBSSSCCCCGGGTCSSSEEEEESSSTTCCTTSCCEEEECCGG--------------GHHHHHHHHHHT-TCCCCHHHHHH
T ss_pred cccCCCCcChhhcCCCEEEEEechhccCCccceeEEEEeCHH--------------HHHHHHHHHhhh-ccCCCHHHHHH
Confidence 3322110 00001145688899999883 233399998774 333333221111 33556666666
Q ss_pred HHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCC
Q 022463 250 LAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSEN 286 (297)
Q Consensus 250 l~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~ 286 (297)
+.++++ ... .+++.+++.+++.+++.+.|++.+.
T Consensus 271 ~~~~l~--~~~-~~~~~~~~~~~~~~~l~~~l~~~~~ 304 (391)
T 3h14_A 271 ALAALD--CDA-ELQANLDVYKANRKLMLERLPKAGF 304 (391)
T ss_dssp HHHHTT--CHH-HHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHhC--ChH-HHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 666666 333 6788888899999999998887654
No 130
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.82 E-value=1.2e-20 Score=168.74 Aligned_cols=230 Identities=13% Similarity=0.130 Sum_probs=155.0
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-H-HHHHHHHHhcCC---CCeEEEecCCCCCcccccccccccccc
Q 022463 26 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-P-SNFQVYTALLKP---HDRIMALDLPHGGHLSHGYQTDTKKIS 100 (297)
Q Consensus 26 ~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~-~~~~~~~~~~~~---gd~Vl~~~~~~~~~~~~~~~~~~~~~~ 100 (297)
....++.+++++++++++|++..+ .+++++|+ + ++..++.+++.+ ||.|+++..+|.+.. .+.
T Consensus 44 ~~~~~~~~~l~~~la~~~g~~~~~---~v~~~~g~gt~al~~~~~~l~~~~~~g~~vi~~~~~~~~~~---------~~~ 111 (360)
T 1w23_A 44 QSYEEVHEQAQNLLRELLQIPNDY---QILFLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKALK---------EAK 111 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTE---EEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHH---------HHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCc---eEEEECCcchHHHHHHHHHhcCCCCcccEEEecchhHHHHH---------HHH
Confidence 444556667779999999996322 48888876 4 676677788765 666776665444311 012
Q ss_pred eeeeeeEeeecccCCCCCcCCHHHHHH-HhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccc
Q 022463 101 AVSIFFETMPYRLNESTGYIDYDQLEK-SATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAA 177 (297)
Q Consensus 101 ~~g~~~~~v~~~~~~~~~~~d~~~l~~-~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~ 177 (297)
..| .+..++ .+++++.+|++++++ .+++ +|++|++ +++| +|.+.| +++++||+++|+|++|+.+..+.
T Consensus 112 ~~g-~~~~v~--~~~~~~~~d~~~l~~~~i~~-~~k~v~~~~~~nptG~~~~-----~i~~~~~~~li~D~a~~~~~~~~ 182 (360)
T 1w23_A 112 LLG-ETHIAA--STKANSYQSIPDFSEFQLNE-NDAYLHITSNNTIYGTQYQ-----NFPEINHAPLIADMSSDILSRPL 182 (360)
T ss_dssp TTS-EEEEEE--ECGGGTSCSCCCGGGCCCCT-TEEEEEEESEETTTTEECS-----SCCCCCSSCEEEECTTTTTSSCC
T ss_pred HhC-CeEEee--cccccCcCCccchHhhccCC-CCCEEEEeCCCCCcceecc-----cccccCCceEEEechhhcCCCCc
Confidence 234 344444 443245578899988 8876 8999988 6666 788766 33448999999999999887665
Q ss_pred cCCCCCCCCccEEEecCCccCCCCCc-eEEEEecCchhhc--cCCccchhhHHHHhhhcccCCCCCCCchHHHHHHHHHH
Q 022463 178 GVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN--KQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVAL 254 (297)
Q Consensus 178 ~~~~~~~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al 254 (297)
++. ..|++++|+||++ ||.| |+++++++...++ ..++.. .+..... .....++++...++++.+++
T Consensus 183 ~~~-----~~di~~~s~sK~~-~~~G~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~al 251 (360)
T 1w23_A 183 KVN-----QFGMIYAGAQKNL-GPSGVTVVIVKKDLLNTKVEQVPTML--QYATHIK---SDSLYNTPPTFSIYMLRNVL 251 (360)
T ss_dssp CGG-----GCSEEEEETTTTT-SCTTCEEEEEEHHHHCSCCTTCCGGG--CHHHHHH---TTTCSSCCCHHHHHHHHHHH
T ss_pred Ccc-----cCCEEEEEccccc-CCCCcEEEEEcHHHHhhcccCCcchh--hhhhhhh---ccCCCCCCCHHHHHHHHHHH
Confidence 432 2389999999987 5778 9999988642221 111111 1110000 11224678888888999999
Q ss_pred HHHhhhcChhhHHHHhhhhHHHHHhhccCCCCc
Q 022463 255 KQVCTLITFSHIHVFSLHVYPAFVSNQNNSENI 287 (297)
Q Consensus 255 ~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~ 287 (297)
+.+.+..+++++.++.+++++++.+.|++++.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 284 (360)
T 1w23_A 252 DWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGF 284 (360)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTS
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCc
Confidence 887654357889999999999999999988743
No 131
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.81 E-value=1.6e-19 Score=164.83 Aligned_cols=240 Identities=15% Similarity=0.095 Sum_probs=155.7
Q ss_pred CCCchhHHHHHHHHHHHHHHHc------C--CCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccc
Q 022463 22 YGGNEYIDMAESLCQKRALEAF------R--LDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGY 92 (297)
Q Consensus 22 ~~~~~~~~~~e~~~~~~la~~~------g--~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~ 92 (297)
|+......++++.+.+++.+.+ | +++++ +++++|+ .++..++.+++++||+|+++..+|++.....
T Consensus 71 y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~----v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~- 145 (416)
T 1bw0_A 71 YFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDN----VVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVC- 145 (416)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGG----EEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHH-
T ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcce----EEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHH-
Confidence 4433456778844444444211 1 45543 8888887 4776688888999999999998887764322
Q ss_pred cccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCEEEEe
Q 022463 93 QTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYD---YERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 93 ~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~livD 167 (297)
...|..+..++.+.+ .++.+|++++++.+++ +++++++ +++| +|.+.| +++|.++|++||+++|+|
T Consensus 146 -------~~~g~~~~~v~~~~~-~~~~~d~~~l~~~l~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 216 (416)
T 1bw0_A 146 -------KAYGIGMHFYNCRPE-NDWEADLDEIRRLKDD-KTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSD 216 (416)
T ss_dssp -------HHTTCEEEEEEEEGG-GTTEECHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred -------HHcCcEEEEeecCcc-cCCCCCHHHHHHHhcc-CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEE
Confidence 222333434433221 2467899999999986 7888877 7777 798888 889999999999999999
Q ss_pred hhhhcccccccC---CCCCC---C--CccEEEecCCccCCCC--CceEEEEecC--chhhccCCccchhhHHHHhhhccc
Q 022463 168 MAHISGLVAAGV---IPSPF---E--YADVVTTTTHKSLRGP--RGAMIFFRKG--VKEINKQGKEVFYDYEEKINQAVF 235 (297)
Q Consensus 168 ~a~~~g~~~~~~---~~~~~---~--~~D~~~~s~~K~l~gp--~gG~i~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~ 235 (297)
++++........ ...++ . ..++++.|++|+++.| +.|+++++++ ... .+...+.....
T Consensus 217 e~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~~----------~~~~~~~~~~~ 286 (416)
T 1bw0_A 217 EIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGP----------SFLEGLKRVGM 286 (416)
T ss_dssp CTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSCH----------HHHHHHHHHHH
T ss_pred ccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCCceEEEEEeeCchhhHH----------HHHHHHHHHhc
Confidence 998763221110 01111 1 2247788999987544 3489988773 210 11111111100
Q ss_pred CCCCCCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 236 PGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 236 ~~~~~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
...+++.+..+++.++|+...+. .++++.++.+++.+++.+.|++++.++
T Consensus 287 --~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~g~~ 336 (416)
T 1bw0_A 287 --LVCGPCTVVQAALGEALLNTPQE-HLDQIVAKIEESAMYLYNHIGECIGLA 336 (416)
T ss_dssp --HHTCSCHHHHHHHHHHHHSSCHH-HHHHHHHHHHHHHHHHHHHHTTSTTEE
T ss_pred --cccCCCcHHHHHHHHHHhcccHH-HHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 02345667777777777654444 678888999999999999999887655
No 132
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.81 E-value=1.7e-19 Score=165.30 Aligned_cols=234 Identities=11% Similarity=0.045 Sum_probs=158.1
Q ss_pred cCCCchhHHHHHHHHHHHHHHHcCC--CCC-CCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccc
Q 022463 21 YYGGNEYIDMAESLCQKRALEAFRL--DPE-KWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDT 96 (297)
Q Consensus 21 ~~~~~~~~~~~e~~~~~~la~~~g~--~~~-~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~ 96 (297)
.|+......++++.+.+++.+.+|. +++ + +++++|+ .++..++++++++||+|+++...|++.....
T Consensus 72 ~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~----v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----- 142 (429)
T 1yiz_A 72 QYTRGFGHPRLVQALSKLYSQLVDRTINPMTE----VLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMV----- 142 (429)
T ss_dssp SCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTS----EEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHH-----
T ss_pred CCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCC----EEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH-----
Confidence 3444445678887777777777784 454 4 8888887 5777788888999999999998777754322
Q ss_pred cccceeeeeeEeeecccCCC---------CCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCC
Q 022463 97 KKISAVSIFFETMPYRLNES---------TGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYD---YERIRKVCNKQKA 162 (297)
Q Consensus 97 ~~~~~~g~~~~~v~~~~~~~---------~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~ 162 (297)
...|..+..+ +.+.+ ++.+|++++++.+++ ++++|++ +++| +|.+.| +++|.++|++||+
T Consensus 143 ---~~~g~~~~~~--~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~ 216 (429)
T 1yiz_A 143 ---KAAGGIPRFI--PLKPNKTGGTISSADWVLDNNELEALFNE-KTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNV 216 (429)
T ss_dssp ---HHTTCEEEEE--ECBCCCSSSSEEGGGCBCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTC
T ss_pred ---HHcCCEEEEE--eCCcccccccccccCcccCHHHHHHHhcc-CceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCc
Confidence 2223334334 44433 457899999999986 8898888 6777 787775 8899999999999
Q ss_pred EEEEehhhhcccccc----cCCCCC-CCCccEEEecCCccCCCCC--ceEEEEecCchhhccCCccchhhHHHHhhhccc
Q 022463 163 IMLADMAHISGLVAA----GVIPSP-FEYADVVTTTTHKSLRGPR--GAMIFFRKGVKEINKQGKEVFYDYEEKINQAVF 235 (297)
Q Consensus 163 ~livD~a~~~g~~~~----~~~~~~-~~~~D~~~~s~~K~l~gp~--gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 235 (297)
++|+|++|+...... .+...+ ..+.|+++.|++|+++.|. .|+++++++ +.+.+.....
T Consensus 217 ~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~--------------~~~~l~~~~~ 282 (429)
T 1yiz_A 217 LCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEA--------------LLKNLQMVHQ 282 (429)
T ss_dssp EEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCHH--------------HHHHHHHHHH
T ss_pred EEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEEeCHH--------------HHHHHHHHHh
Confidence 999999987532211 111110 1267899999999875332 499998773 3343332211
Q ss_pred CCCCCCCchHHHHHHHHHHHH-----HhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 236 PGLQGGPHNHTITGLAVALKQ-----VCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 236 ~~~~~t~~~~~~~al~~al~~-----~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
....+.+.+..+++.++|+. ......+++++++.+++.+++.+.|++.
T Consensus 283 -~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 335 (429)
T 1yiz_A 283 -NCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEV 335 (429)
T ss_dssp -TTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -hcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 11234566667777777876 2112247778888888888888888765
No 133
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.81 E-value=1.9e-18 Score=155.35 Aligned_cols=220 Identities=11% Similarity=0.004 Sum_probs=152.8
Q ss_pred HHHHHHHHHHHHHHcC--CCCCCCcceEEecCChH-HHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeee
Q 022463 29 DMAESLCQKRALEAFR--LDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 105 (297)
Q Consensus 29 ~~~e~~~~~~la~~~g--~~~~~~~~~v~~~sG~~-~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 105 (297)
.++++.+.+++.+.+| ++++ .+++++|++ ++..++.+++++||+|+++..+|++..... ...|..
T Consensus 72 ~~l~~~la~~l~~~~g~~~~~~----~v~~~~G~~~al~~~~~~l~~~gd~Vl~~~~~y~~~~~~~--------~~~g~~ 139 (369)
T 3cq5_A 72 VELRDELAAYITKQTGVAVTRD----NLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILA--------KGTHTE 139 (369)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGG----GEEEESHHHHHHHHHHHHHCSTTCEEEEEESSCTHHHHHH--------HHTTCE
T ss_pred HHHHHHHHHhhhhcccCCCChH----hEEECCChHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHH--------HHcCCE
Confidence 5777666566666554 4554 488988885 665688888999999999998887764322 222333
Q ss_pred eEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCCC-
Q 022463 106 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS- 182 (297)
Q Consensus 106 ~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~~- 182 (297)
+..+ +.+ +++.+|++++++.+++.++++|++ +++| +|.+.|++++.++|+.+++++|+|++|+.+.........
T Consensus 140 ~~~v--~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~ 216 (369)
T 3cq5_A 140 FIAV--SRG-ADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATTLL 216 (369)
T ss_dssp EEEE--ECC-TTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGT
T ss_pred EEEe--cCC-cCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcCCcchHHHH
Confidence 4334 444 456899999999998657999988 6777 899999999999999999999999999866532111000
Q ss_pred CCCC-ccEEEecCCccCCCC--CceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHHHHHHHHhh
Q 022463 183 PFEY-ADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 259 (297)
Q Consensus 183 ~~~~-~D~~~~s~~K~l~gp--~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~ 259 (297)
...+ .++++.|++|+++.| +.|++++++ ++.+.+..... ..+++.+..+++.++++..
T Consensus 217 ~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------------~~~~~l~~~~~---~~~~~~~~~~a~~~~l~~~-- 277 (369)
T 3cq5_A 217 EKYPTKLVVSRTMSKAFDFAGGRLGYFVANP--------------AFIDAVMLVRL---PYHLSALSQAAAIVALRHS-- 277 (369)
T ss_dssp TTCTTTEEEEEESSSTTSCGGGCCEEEEECT--------------HHHHHHHTTSC---TTCSCHHHHHHHHHHHHTH--
T ss_pred hhCCCCEEEEEechHhcCCcccceEEEEeCH--------------HHHHHHHHcCC---CCCCCHHHHHHHHHHhcCH--
Confidence 0013 568899999998533 239999887 34444443222 2245666666666666642
Q ss_pred hcChhhHHHHhhhhHHHHHhhccC
Q 022463 260 LITFSHIHVFSLHVYPAFVSNQNN 283 (297)
Q Consensus 260 ~~g~~~~~~~~~~l~~~l~~~l~~ 283 (297)
. .+++++++.+++.+++.+.|++
T Consensus 278 ~-~~~~~~~~~~~~~~~l~~~L~~ 300 (369)
T 3cq5_A 278 A-DTLGTVEKLSVERVRVAARLEE 300 (369)
T ss_dssp H-HHHTHHHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHh
Confidence 2 5677888888888888888876
No 134
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.81 E-value=3.2e-19 Score=161.07 Aligned_cols=217 Identities=17% Similarity=0.157 Sum_probs=143.9
Q ss_pred HHHHHHHHHHHHHHcCCC-CCCCcceEEecCChHHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeeeeE
Q 022463 29 DMAESLCQKRALEAFRLD-PEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFE 107 (297)
Q Consensus 29 ~~~e~~~~~~la~~~g~~-~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 107 (297)
..+++..++.+++++|++ +++ .+++++|+.++..++.++ +||+|+++..+|++++..... +...|..+
T Consensus 57 ~~~~~~~~~~~a~~~g~~~~~~---~~~~~ggt~a~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~~-----~~~~g~~~- 125 (374)
T 2aeu_A 57 SYFAEKVNEYGLKHLGGDENDK---CVGFNRTSSAILATILAL--KPKKVIHYLPELPGHPSIERS-----CKIVNAKY- 125 (374)
T ss_dssp HHHHHHHHHHHHHHHTCCTTEE---EEEESSHHHHHHHHHHHH--CCSEEEEECSSSSCCTHHHHH-----HHHTTCEE-
T ss_pred hHHHHHHHHHHHHHhCCCCcce---EEEEcChHHHHHHHHHhC--CCCEEEEecCCCCccHHHHHH-----HHHcCcEE-
Confidence 455666778888999984 232 244445556777677776 999999999888776543221 12223223
Q ss_pred eeecccCCCCCcCCHHHHHHHhhhcCCcE-EEE-cCCC-CC-CcccHHHHHHHHHhcCCEEEEehhhhcccc-cccCCCC
Q 022463 108 TMPYRLNESTGYIDYDQLEKSATLFRPKL-IVA-GASA-YA-RLYDYERIRKVCNKQKAIMLADMAHISGLV-AAGVIPS 182 (297)
Q Consensus 108 ~v~~~~~~~~~~~d~~~l~~~l~~~~~~~-v~~-~~~~-~G-~~~~~~~i~~la~~~g~~livD~a~~~g~~-~~~~~~~ 182 (297)
+.+ .|++++++. ++ +|++ |++ +++| +| ...|+++|.++|++||+++|+|++++.+.. +.. ...
T Consensus 126 -~~v--------~d~~~l~~~-~~-~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~-~~~ 193 (374)
T 2aeu_A 126 -FES--------DKVGEILNK-ID-KDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVRLLFN-QPP 193 (374)
T ss_dssp -EEE--------SCHHHHHTT-CC-TTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTT-CCC
T ss_pred -EEe--------CCHHHHHhc-CC-CccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCEEEEECCcccccccccc-cCC
Confidence 222 278899888 54 8999 888 6777 57 789999999999999999999999877642 111 110
Q ss_pred CCC-CccEEEecCCccCCCCCceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHHHHHHHHhhhc
Q 022463 183 PFE-YADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLI 261 (297)
Q Consensus 183 ~~~-~~D~~~~s~~K~l~gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~ 261 (297)
+.. ++|++++|+||+++|+++|+++++++ +.+.+...... ..++++....+++.++++.+...
T Consensus 194 ~~~~~~di~~~S~sK~l~g~~~G~~~~~~~--------------~~~~l~~~~~~-~~~~~~~~~~~a~~~al~~~~~~- 257 (374)
T 2aeu_A 194 ALKLGADLVVTSTDKLMEGPRGGLLAGKKE--------------LVDKIYIEGTK-FGLEAQPPLLAGIYRALKNFNLE- 257 (374)
T ss_dssp HHHHTCSEEEEETTSSSSSCSCEEEEEEHH--------------HHHHHHHHHHT-TTCBCCHHHHHHHHHHHHHCCHH-
T ss_pred ccccCCcEEEecCcccccCcceEEEEECHH--------------HHHHHHHhhcc-ccCCCCHHHHHHHHHHHHHHhHH-
Confidence 111 67999999999999988899999884 34433332211 12345667777777888765332
Q ss_pred ChhhHHHHhhhh----HHHHHhhccCC
Q 022463 262 TFSHIHVFSLHV----YPAFVSNQNNS 284 (297)
Q Consensus 262 g~~~~~~~~~~l----~~~l~~~l~~~ 284 (297)
.+++..++.+.+ .+.+.+.|..+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~l~~~L~~~ 284 (374)
T 2aeu_A 258 RIRKAFERAKNFDLSKIEKLNKELKAI 284 (374)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 345555555555 57777666554
No 135
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.81 E-value=4.4e-19 Score=161.83 Aligned_cols=231 Identities=13% Similarity=0.114 Sum_probs=152.1
Q ss_pred CCCchhHHHHHHHHHHHHHHHcCC--CC-CCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCccccccccccc
Q 022463 22 YGGNEYIDMAESLCQKRALEAFRL--DP-EKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTK 97 (297)
Q Consensus 22 ~~~~~~~~~~e~~~~~~la~~~g~--~~-~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~ 97 (297)
|+......++++.+.+++.+.+|. ++ ++ +++++|+ .++..++.+++++||+|+++..+|++.....
T Consensus 71 y~~~~g~~~l~~~ia~~~~~~~g~~~~~~~~----v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~------ 140 (412)
T 2x5d_A 71 YSTSRGIPRLRRAISHWYRDRYDVQIDPESE----AIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGA------ 140 (412)
T ss_dssp --CTTCCHHHHHHHHHHHHHHHCCCCCTTTS----EEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHH------
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCCCCcC----EEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHH------
Confidence 433445678886666666666685 44 33 8888887 5777788888999999999998877764322
Q ss_pred ccceeeeeeEeeecccCCC-CCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCEEEEehhhh
Q 022463 98 KISAVSIFFETMPYRLNES-TGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYD---YERIRKVCNKQKAIMLADMAHI 171 (297)
Q Consensus 98 ~~~~~g~~~~~v~~~~~~~-~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~livD~a~~ 171 (297)
...|..+..+ +.+++ ++.+|++++++.+++ ++++|++ +++| +|.+.| +++|.++|++||+++|+|++|+
T Consensus 141 --~~~g~~~~~~--~~~~~~~~~~d~~~l~~~i~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~ 215 (412)
T 2x5d_A 141 --VIAGAQVRSV--PLVPGIDFFNELERAIRESIP-KPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYA 215 (412)
T ss_dssp --HHHTCEEEEE--ECSTTSCHHHHHHHHHHTEES-CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT
T ss_pred --HHcCCEEEEe--ecCCccCCCCCHHHHHHhccc-CceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 2223334334 45433 345789999999986 8999998 7777 787766 5789999999999999999998
Q ss_pred cccccc----cCCCCC-CCCccEEEecCCccCC--CCCceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCch
Q 022463 172 SGLVAA----GVIPSP-FEYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHN 244 (297)
Q Consensus 172 ~g~~~~----~~~~~~-~~~~D~~~~s~~K~l~--gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~ 244 (297)
.+.... .+.... ..+.|+++.|++|+++ |.+.|+++++++ +.+.+...... ...+.+.
T Consensus 216 ~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~--------------~~~~l~~~~~~-~~~~~~~ 280 (412)
T 2x5d_A 216 DIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPE--------------LVSALARIKSY-HDYGTFT 280 (412)
T ss_dssp TCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEECHH--------------HHHHHHHHHHH-HCCCCCH
T ss_pred ccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEcCHH--------------HHHHHHHHHhh-hccCCCH
Confidence 755321 111110 0156899999999984 333499998773 33333322111 0234556
Q ss_pred HHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 245 HTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 245 ~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
+..+++.++|+.. +. .+++++++.+++.+++.+.|++.
T Consensus 281 ~~~~a~~~~l~~~-~~-~~~~~~~~~~~~~~~l~~~L~~~ 318 (412)
T 2x5d_A 281 PLQVAAIAALEGD-QQ-CVRDIARQYQQRRDVLVKGLREA 318 (412)
T ss_dssp HHHHHHHHHHHSC-SH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCC-HH-HHHHHHHHHHHHHHHHHHHHHHC
Confidence 6666666666533 22 46778888888888888888765
No 136
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.81 E-value=1.2e-18 Score=157.90 Aligned_cols=231 Identities=9% Similarity=-0.018 Sum_probs=157.2
Q ss_pred CCCchhHHHHHHHHHHHHHHHcCCC---CC-CCcceEEecCChH-HHHHHHHHhcCCC-----CeEEEecCCCCCccccc
Q 022463 22 YGGNEYIDMAESLCQKRALEAFRLD---PE-KWGVNVQSLSGSP-SNFQVYTALLKPH-----DRIMALDLPHGGHLSHG 91 (297)
Q Consensus 22 ~~~~~~~~~~e~~~~~~la~~~g~~---~~-~~~~~v~~~sG~~-~~~~~~~~~~~~g-----d~Vl~~~~~~~~~~~~~ 91 (297)
|+......++++.+.+++++.+|.+ ++ + +++++|++ ++..++.+++++| |+|+++...|++....
T Consensus 62 y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~~----i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~- 136 (396)
T 3jtx_A 62 YPLTAGLPELRQACANWLKRRYDGLTVDADNE----ILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGA- 136 (396)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHTTTCCCCTTTS----EEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHH-
T ss_pred CCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCe----EEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHH-
Confidence 4444456788888878888888853 55 4 88888884 7766888889996 7999998777665432
Q ss_pred ccccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHH---HHHHHHhcCCEEEE
Q 022463 92 YQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYER---IRKVCNKQKAIMLA 166 (297)
Q Consensus 92 ~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~---i~~la~~~g~~liv 166 (297)
+...|..+..+ +.+.+++.+|++++++++++ ++++|++ +++| +|.+.|.++ |.++|++||+++|+
T Consensus 137 -------~~~~g~~~~~v--~~~~~g~~~d~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 206 (396)
T 3jtx_A 137 -------TLLGGGEIHFA--NCPAPSFNPDWRSISEEVWK-RTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIAS 206 (396)
T ss_dssp -------HHHTTCEEEEE--ECCTTTCCCCGGGSCHHHHH-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEE
T ss_pred -------HHHcCCEEEEe--ecCCCCCccCHHHHHHhhcc-CcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 22233334444 44545567899999999988 8999998 7777 798877665 88999999999999
Q ss_pred ehhhhcccccccCCCCC----------CCCccEEEecCCccCCC--CCceEEEEecCchhhccCCccchhhHHHHhhhcc
Q 022463 167 DMAHISGLVAAGVIPSP----------FEYADVVTTTTHKSLRG--PRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV 234 (297)
Q Consensus 167 D~a~~~g~~~~~~~~~~----------~~~~D~~~~s~~K~l~g--p~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 234 (297)
|++|+....... .+.+ ..+.++++.|++|.++. .+.|+++.+++ +.+.+....
T Consensus 207 De~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~--------------~~~~~~~~~ 271 (396)
T 3jtx_A 207 DECYSEIYFDGN-KPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAE--------------LLKNFLLYR 271 (396)
T ss_dssp ECTTTTCCSTTC-CCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEECHH--------------HHHHHHHHH
T ss_pred EccccccccCCC-CCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEeCHH--------------HHHHHHHHH
Confidence 999875332210 0100 01567889999997533 33388887763 333333221
Q ss_pred cCCCCCCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCC
Q 022463 235 FPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSEN 286 (297)
Q Consensus 235 ~~~~~~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~ 286 (297)
.. ...+++.+..+++.++++. .. .+++.+++.++..+++.+.|++...
T Consensus 272 ~~-~~~~~~~~~~~a~~~~l~~--~~-~~~~~~~~~~~~~~~l~~~l~~~~~ 319 (396)
T 3jtx_A 272 TY-HGSAMSIPVQRASIAAWDD--EQ-HVIDNRRLYQEKFERVIPILQQVFD 319 (396)
T ss_dssp HH-HTCCCCHHHHHHHHHHHHC--CH-HHHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred hh-cccCCCHHHHHHHHHHhCC--HH-HHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 11 1235566777777777753 23 6788888888899999998887633
No 137
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.80 E-value=1e-18 Score=156.54 Aligned_cols=226 Identities=13% Similarity=0.055 Sum_probs=148.5
Q ss_pred cCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhcCCC-CeEEEecCCCCCcccccccccccc
Q 022463 21 YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALLKPH-DRIMALDLPHGGHLSHGYQTDTKK 98 (297)
Q Consensus 21 ~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~g-d~Vl~~~~~~~~~~~~~~~~~~~~ 98 (297)
.|+... ..+++ +.+++++++++++ +++++|+ .++..++++++++| |+|+++..+|++.....
T Consensus 54 ~Y~~~~-~~~lr----~~la~~~~~~~~~----v~~~~G~~~ai~~~~~~~~~~g~d~Vl~~~p~~~~~~~~~------- 117 (356)
T 1fg7_A 54 RYPECQ-PKAVI----ENYAQYAGVKPEQ----VLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSA------- 117 (356)
T ss_dssp SCCCSS-CHHHH----HHHHHHHTSCGGG----EEEESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHHHHH-------
T ss_pred cCCCcc-HHHHH----HHHHHHhCCChHH----EEEcCCHHHHHHHHHHHHhCCCCCEEEEeCCChHHHHHHH-------
Confidence 344332 45666 8888999998754 9999987 46666888889999 99999987776654322
Q ss_pred cceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHh--cCCEEEEehhhhccc
Q 022463 99 ISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNK--QKAIMLADMAHISGL 174 (297)
Q Consensus 99 ~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~--~g~~livD~a~~~g~ 174 (297)
...|..+ ++++.+ +++.+|++++++.++ ++++|++ +++| +|.+.|.+++.++++. +|+++|+|++|+...
T Consensus 118 -~~~g~~~--~~v~~~-~~~~~d~~~l~~~i~--~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~ 191 (356)
T 1fg7_A 118 -ETIGVEC--RTVPTL-DNWQLDLQGISDKLD--GVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFC 191 (356)
T ss_dssp -HHHTCEE--EECCCC-TTSCCCHHHHHTSCT--TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTTCEEEEECTTGGGS
T ss_pred -HHcCCEE--EEeeCC-CCCCCCHHHHHHHhc--CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCCEEEEEccchhhc
Confidence 2233333 334455 456799999999886 7888888 6777 7988887655555443 899999999987543
Q ss_pred ccccCCCC-CCCCccEEEecCCccCC--CCCceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHH
Q 022463 175 VAAGVIPS-PFEYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLA 251 (297)
Q Consensus 175 ~~~~~~~~-~~~~~D~~~~s~~K~l~--gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~ 251 (297)
........ ...+.++++.|++|+++ |.+.|++++++ ++.+.+.....+. +++.+..+++.
T Consensus 192 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------------~~~~~l~~~~~~~---~~~~~~~~a~~ 254 (356)
T 1fg7_A 192 PQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANE--------------EVINLLMKVIAPY---PLSTPVADIAA 254 (356)
T ss_dssp GGGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECH--------------HHHHHHHHHSCSS---CSCHHHHHHHH
T ss_pred CCCcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeCH--------------HHHHHHHHhcCCC---CCCHHHHHHHH
Confidence 11111100 00145788999999874 22349999877 3444444332221 44555555555
Q ss_pred HHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCC
Q 022463 252 VALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSEN 286 (297)
Q Consensus 252 ~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~ 286 (297)
++|+..... .+++.+++.++..+++.+.|++++.
T Consensus 255 ~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~ 288 (356)
T 1fg7_A 255 QALSPQGIV-AMRERVAQIIAEREYLIAALKEIPC 288 (356)
T ss_dssp HHTSHHHHH-HHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred HHhcCccHH-HHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 555432111 2677888888889999999988764
No 138
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.80 E-value=2e-18 Score=156.96 Aligned_cols=232 Identities=16% Similarity=0.055 Sum_probs=153.4
Q ss_pred CCCchhHHHHHHHHHHHHHHHcCC--CCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccc
Q 022463 22 YGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKK 98 (297)
Q Consensus 22 ~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~ 98 (297)
|+......++++.+.+++.+.+|. +++ .+++++|+ .++..++.+++++||+|+++...|++.....
T Consensus 71 y~~~~~~~~l~~~la~~~~~~~g~~~~~~----~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~------- 139 (407)
T 2zc0_A 71 YTPANGIPELREELAAFLKKYDHLEVSPE----NIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAF------- 139 (407)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHSCCCCCGG----GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHH-------
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCCCcc----eEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHH-------
Confidence 444455678886666666666684 454 38888886 5777788888999999999987776653322
Q ss_pred cceeeeeeEeeecccCCCCCcCCHHHHHHHhh----h-cCCcEEEE--cCCC-CCCcccHH---HHHHHHHhcCCEEEEe
Q 022463 99 ISAVSIFFETMPYRLNESTGYIDYDQLEKSAT----L-FRPKLIVA--GASA-YARLYDYE---RIRKVCNKQKAIMLAD 167 (297)
Q Consensus 99 ~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~----~-~~~~~v~~--~~~~-~G~~~~~~---~i~~la~~~g~~livD 167 (297)
...|..+..+ +.++ ++ +|++++++.++ + .++++|++ +++| +|.+.|.+ +|.++|++||+++|+|
T Consensus 140 -~~~g~~~~~v--~~~~-~~-~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~D 214 (407)
T 2zc0_A 140 -EQLGAKIEGV--PVDN-DG-MRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIED 214 (407)
T ss_dssp -HTTTCEEEEE--EEET-TE-ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEE
T ss_pred -HHcCCEEEEc--ccCC-CC-CCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEE
Confidence 2233334344 3442 33 89999999997 4 26788754 5667 79888886 9999999999999999
Q ss_pred hhhhcccccccCCCCCC-----CCccEEEecCCccCCCC--CceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCC
Q 022463 168 MAHISGLVAAGVIPSPF-----EYADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240 (297)
Q Consensus 168 ~a~~~g~~~~~~~~~~~-----~~~D~~~~s~~K~l~gp--~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 240 (297)
++|+.+...... ..++ .+.++++.|++|+++ | +.|++++++ ++.+.+........ .
T Consensus 215 e~~~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~--------------~~~~~~~~~~~~~~-~ 277 (407)
T 2zc0_A 215 TAYNFMRYEGGD-IVPLKALDNEGRVIVAGTLSKVLG-TGFRIGWIIAEG--------------EILKKVLMQKQPID-F 277 (407)
T ss_dssp CTTTTSBSSCSS-CCCGGGGCSSCCEEEEEESTTTTC-TTSCCEEEECCH--------------HHHHHHHHHHTTTT-S
T ss_pred CCCcccccCCCC-CCChhhcCCCCCEEEEcccccccC-CCcceEEEecCH--------------HHHHHHHHHHHhhc-C
Confidence 998865432110 0111 134578889999987 4 359999876 34444433222221 1
Q ss_pred CCchHHHHHHHHHHHHH-hh-hcChhhHHHHhhhhHHHHHhhccC-CCCc
Q 022463 241 GPHNHTITGLAVALKQV-CT-LITFSHIHVFSLHVYPAFVSNQNN-SENI 287 (297)
Q Consensus 241 t~~~~~~~al~~al~~~-~~-~~g~~~~~~~~~~l~~~l~~~l~~-~~~~ 287 (297)
+.+.....++.++++.. .+ . .+++++++.+++.+++.+.|++ .+.+
T Consensus 278 ~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~ 326 (407)
T 2zc0_A 278 CAPAISQYIALEYLKRGYFEKY-HLEGALLGYKEKRDIMLKALENHLPNA 326 (407)
T ss_dssp SSCHHHHHHHHHHHHTTHHHHH-TTTTHHHHHHHHHHHHHHHHHHHCTTS
T ss_pred CCCHHHHHHHHHHHHcCCchHH-HHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 23455566666666543 12 3 6788888888888888888876 3444
No 139
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.80 E-value=1.3e-18 Score=160.13 Aligned_cols=164 Identities=19% Similarity=0.249 Sum_probs=123.1
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHh---------cCCCCeEEEecCCCCCccccccccc
Q 022463 25 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL---------LKPHDRIMALDLPHGGHLSHGYQTD 95 (297)
Q Consensus 25 ~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~---------~~~gd~Vl~~~~~~~~~~~~~~~~~ 95 (297)
.+...+++ +.+++++|++. .+++++|++++..++.++ +++||+|+++..+|++...++.
T Consensus 61 ~~~~~~l~----~~la~~~g~~~-----~i~~~sGt~a~~~al~~l~~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~~--- 128 (437)
T 3bb8_A 61 GRFNDAFE----KKLGEYLGVPY-----VLTTTSGSSANLLALTALTSPKLGVRALKPGDEVITVAAGFPTTVNPTI--- 128 (437)
T ss_dssp CHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHTTCGGGGGGSCCTTCEEEECSSSCHHHHHHHH---
T ss_pred ChHHHHHH----HHHHHHHCCCc-----EEEeCCHHHHHHHHHHHhhhcccccccCCCcCEEEECCCCcHHHHHHHH---
Confidence 34556666 88999999873 378888888887788887 7899999999998888865443
Q ss_pred ccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEehhhhcccc
Q 022463 96 TKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLV 175 (297)
Q Consensus 96 ~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~a~~~g~~ 175 (297)
..|..+ +.++.+++++.+|++++++.+++ +|++|++.. ++|...|+++|.++|+++|+++|+|++|+.|..
T Consensus 129 -----~~g~~~--~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~-~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~ 199 (437)
T 3bb8_A 129 -----QNGLIP--VFVDVDIPTYNVNASLIEAAVSD-KTKAIMIAH-TLGNLFDLAEVRRVADKYNLWLIEDCCDALGST 199 (437)
T ss_dssp -----HTTCEE--EECCEETTTTEECGGGHHHHCCT-TEEEEEEEC-GGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCE
T ss_pred -----HcCCEE--EEEeccCccCCcCHHHHHHhcCC-CCeEEEEeC-CCCChhcHHHHHHHHHHcCCEEEEECccccCce
Confidence 223223 34455544688999999999987 888888832 567789999999999999999999999998876
Q ss_pred cccCCCCCCCCccEEEecC--CccCCCCCceEEEEecC
Q 022463 176 AAGVIPSPFEYADVVTTTT--HKSLRGPRGAMIFFRKG 211 (297)
Q Consensus 176 ~~~~~~~~~~~~D~~~~s~--~K~l~gp~gG~i~~~~~ 211 (297)
+ +.... ....|++++|+ .|.+.++.||+++.+++
T Consensus 200 ~-~~~~~-~~~~d~~~~s~~~~k~l~~g~gg~~~~~~~ 235 (437)
T 3bb8_A 200 Y-DGKMA-GTFGDIGTVSFYPAKHITMGEGGAVFTQSA 235 (437)
T ss_dssp E-TTEET-TSSSSEEEEECSTTSSSCCSSCEEEEESCH
T ss_pred E-CCeec-ccccCEEEEECcCCcCCCCCCeEEEEeCCH
Confidence 6 33222 01378877764 45577777788888765
No 140
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.80 E-value=2.1e-18 Score=159.87 Aligned_cols=157 Identities=17% Similarity=0.184 Sum_probs=117.1
Q ss_pred HHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeeeeEeee
Q 022463 31 AESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMP 110 (297)
Q Consensus 31 ~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~ 110 (297)
..+.+++++++++|++. .+++++|++++..++ .++++||+|+++...|++....+... +...|..+..+
T Consensus 134 ~~~~l~~~la~~~g~~~-----~i~~~sGt~al~~~l-~~~~~Gd~Vi~~~~~y~~~~~~~~~~----~~~~G~~v~~v- 202 (464)
T 1ibj_A 134 TRDALESLLAKLDKADR-----AFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQV----VPRSGVVVKRV- 202 (464)
T ss_dssp HHHHHHHHHHHHHTCSE-----EEEESSHHHHHHHHH-TTSCTTCEEEEESSCCHHHHHHHHHT----SGGGTCEEEEE-
T ss_pred HHHHHHHHHHHHhCCCe-----EEEECCHHHHHHHHH-HHhCCCCEEEEECCCchhHHHHHHHH----HHHcCCEEEEe-
Confidence 34455599999999862 377788877765455 47899999999998887764432111 12223333333
Q ss_pred cccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCCCCCCCcc
Q 022463 111 YRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYAD 188 (297)
Q Consensus 111 ~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~~~~~~~D 188 (297)
+.+ |++++++++++ +|++|++ +++| +|.+.|+++|.++|++||+++|+|++|+.|....... . ++|
T Consensus 203 -~~~------d~~~l~~~i~~-~tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~~g~~~~~~~-~---~~d 270 (464)
T 1ibj_A 203 -NTT------KLDEVAAAIGP-QTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSRPLE-L---GAD 270 (464)
T ss_dssp -CTT------SHHHHHHHCCS-SEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTCCGGG-T---TCS
T ss_pred -CCC------CHHHHHHHhcc-CceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCcccccCChhh-c---CCE
Confidence 332 89999999986 8999999 7878 8999999999999999999999999998765421111 2 689
Q ss_pred EEEecCCccCCCCCc---eEEEEec
Q 022463 189 VVTTTTHKSLRGPRG---AMIFFRK 210 (297)
Q Consensus 189 ~~~~s~~K~l~gp~g---G~i~~~~ 210 (297)
++++|+||+++||.| |++++++
T Consensus 271 iv~~S~sK~~~g~~Gl~~G~l~~~~ 295 (464)
T 1ibj_A 271 IVMHSATKFIAGHSDVMAGVLAVKG 295 (464)
T ss_dssp EEEEETTTTTTCSSCCCCEEEEECS
T ss_pred EEEECCcccccCCCCCcEEEEEECh
Confidence 999999999988754 8898886
No 141
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.80 E-value=2.2e-18 Score=158.01 Aligned_cols=234 Identities=12% Similarity=0.024 Sum_probs=151.3
Q ss_pred cCCCchhHHHHHHHHHHHHHHHcC----CCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCccccccccc
Q 022463 21 YYGGNEYIDMAESLCQKRALEAFR----LDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTD 95 (297)
Q Consensus 21 ~~~~~~~~~~~e~~~~~~la~~~g----~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~ 95 (297)
.|++.....++++.+.+++.+.+| +++++ +++++|+ .++..++.+++++||+|+++..+|++......
T Consensus 78 ~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~----i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~--- 150 (428)
T 1iay_A 78 NFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPER----VVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLR--- 150 (428)
T ss_dssp HCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTS----CEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTT---
T ss_pred CCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhh----EEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHH---
Confidence 344444467888666666666656 55554 8888887 47766888889999999999988877643111
Q ss_pred ccccceeeeeeEeeecccCC-CCCcCCHHHHHHHhhh-----cCCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCEE
Q 022463 96 TKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATL-----FRPKLIVA-GASA-YARLYD---YERIRKVCNKQKAIM 164 (297)
Q Consensus 96 ~~~~~~~g~~~~~v~~~~~~-~~~~~d~~~l~~~l~~-----~~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~l 164 (297)
...|..+..+ +.+. +++.+|++++++++++ .++++|++ +++| +|.+.| +++|.++|+++|+++
T Consensus 151 ----~~~g~~~~~v--~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~l 224 (428)
T 1iay_A 151 ----WRTGVQLIPI--HCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHL 224 (428)
T ss_dssp ----TTTCCEEEEE--CCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEE
T ss_pred ----HhcCCEEEEe--ecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEE
Confidence 1223334334 4442 2457899999999874 26788877 7878 899888 889999999999999
Q ss_pred EEehhhhcccccccCCCC--CCC-C-------cc--EEEecCCccCCC--CCceEEEEecCchhhccCCccchhhHHHHh
Q 022463 165 LADMAHISGLVAAGVIPS--PFE-Y-------AD--VVTTTTHKSLRG--PRGAMIFFRKGVKEINKQGKEVFYDYEEKI 230 (297)
Q Consensus 165 ivD~a~~~g~~~~~~~~~--~~~-~-------~D--~~~~s~~K~l~g--p~gG~i~~~~~~~~~~~~g~~~~~~~~~~~ 230 (297)
|+|++|+........... .+. . .| +++.|+||+++. .+.|++++.++ ++.+.+
T Consensus 225 i~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~-------------~~~~~~ 291 (428)
T 1iay_A 225 VCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFND-------------DVVNCA 291 (428)
T ss_dssp EEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCH-------------HHHHHH
T ss_pred EEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCH-------------HHHHHH
Confidence 999999764322110000 000 1 57 889999998843 33499988432 333333
Q ss_pred hhcccCCCCCCCchHHHHHHHHHHHHHh--hhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 231 NQAVFPGLQGGPHNHTITGLAVALKQVC--TLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 231 ~~~~~~~~~~t~~~~~~~al~~al~~~~--~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
.....+ .+.+.+..+++.++++... +. .+++++++.++..+++.+.|+++
T Consensus 292 ~~~~~~---~~~~~~~~~a~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 343 (428)
T 1iay_A 292 RKMSSF---GLVSTQTQYFLAAMLSDEKFVDN-FLRESAMRLGKRHKHFTNGLEVV 343 (428)
T ss_dssp HHHHTT---SCCCHHHHHHHHHHTTCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhc---ccCCHHHHHHHHHHhcChHHHHH-HHHHHHHHHHHHHHHHHHHHHhc
Confidence 322111 2345555555555554321 12 45677788888888888888776
No 142
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.80 E-value=2.4e-19 Score=160.34 Aligned_cols=229 Identities=12% Similarity=0.064 Sum_probs=143.1
Q ss_pred CCccCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCC--eEEEecCCCCCccccccccc
Q 022463 18 GARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHD--RIMALDLPHGGHLSHGYQTD 95 (297)
Q Consensus 18 ~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd--~Vl~~~~~~~~~~~~~~~~~ 95 (297)
+...|+.++...+++ +++++++|.+. .+++++|+.++..++++++.+|| +|+++...|.+.......
T Consensus 39 ~~~~y~~~~~~~~l~----~~la~~~~~~~-----~i~~~~G~~a~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~~~-- 107 (357)
T 3lws_A 39 ASDQYGTGAIIEPFE----QKFADVLGMDD-----AVFFPSGTMAQQVALRIWSDETDNRTVAYHPLCHLEIHEQDGL-- 107 (357)
T ss_dssp BCEETTEETTHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHH--
T ss_pred CcccccCChHHHHHH----HHHHHHhCCCc-----EEEecCcHHHHHHHHHHHhhcCCCcEEEecccceeeeeccchh--
Confidence 345666667788888 88999999864 37788888888778888888888 677766555444321110
Q ss_pred ccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-C-CCccc---HHHHHHHHHhcCCEEEEehh
Q 022463 96 TKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-Y-ARLYD---YERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 96 ~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~-G~~~~---~~~i~~la~~~g~~livD~a 169 (297)
....|. ..++++. +++.+|+++++++. ++++|++ +++| + |.+.| +++|.++|++||+++|+|++
T Consensus 108 ---~~~~g~--~~~~v~~--~~~~~d~~~l~~~~---~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a 177 (357)
T 3lws_A 108 ---KELHPI--ETILVGA--ADRLMTLDEIKALP---DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGA 177 (357)
T ss_dssp ---HHHSSC--EEEECSC--TTSCCCHHHHHTCC---SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEET
T ss_pred ---hhccCc--EEEEecC--CCCCcCHHHHhcCc---CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECc
Confidence 112232 2343342 45689999999872 4899888 6776 4 77665 78999999999999999999
Q ss_pred hhcccccc-cCCCCCC-CCccEEEecCCccCCCCCceEEEEecCchhhccCCccchhhHHHHhhhcc--cCCCCCCCchH
Q 022463 170 HISGLVAA-GVIPSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV--FPGLQGGPHNH 245 (297)
Q Consensus 170 ~~~g~~~~-~~~~~~~-~~~D~~~~s~~K~l~gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~t~~~~ 245 (297)
|..+.... +....++ ..+|.+++|+||++++|.||+++.+++ +.+.+.... ......+.+..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~gg~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~ 243 (357)
T 3lws_A 178 RLFEMLPYYEKTAAEIAGLFDSIYISFYKGLGGIAGAILAGPAA--------------FCQTARIWKRRYGGDLISLYPY 243 (357)
T ss_dssp THHHHHHHHTCCHHHHHTTSSEEEEESSSTTCCSSCEEEEECHH--------------HHHHHHHHHHHTTCCCSCCHHH
T ss_pred hhhhhhhhcCCChHHHHhcCCEEEEeccccCCCCceEEEEcCHH--------------HHHHHHHHHHHhcCCcccchHH
Confidence 86222111 1000000 157899999999998999998888773 333332211 11111112222
Q ss_pred HHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 246 TITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 246 ~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
.. +..++++.+. +++.+ ..+..+++.+.|++++.++
T Consensus 244 ~~-~~~~~l~~~~-----~~~~~-~~~~~~~l~~~L~~~~g~~ 279 (357)
T 3lws_A 244 IV-SADYYYELRK-----DRMGQ-YYEQAKQLAEQFNALPGVH 279 (357)
T ss_dssp HH-HHHHHHHHHT-----TCHHH-HHHHHHHHHHHHHTSTTEE
T ss_pred HH-HHHHHHHHHH-----HHHHH-HHHHHHHHHHHHHhCCCCe
Confidence 22 2234554422 22322 3556777888888877654
No 143
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.80 E-value=4e-19 Score=162.02 Aligned_cols=229 Identities=13% Similarity=0.067 Sum_probs=152.3
Q ss_pred CCCchhHHHHHHHHHHHHHHHcCC--CCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccc
Q 022463 22 YGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKK 98 (297)
Q Consensus 22 ~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~ 98 (297)
|+......++++.+.+++.+.+|. +++ .+++++|+ .++..++.+++++||+|+++..+|++....
T Consensus 75 y~~~~g~~~l~~~la~~~~~~~g~~~~~~----~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~-------- 142 (409)
T 2gb3_A 75 YSHSAGIWELREAFASYYKRRQRVDVKPE----NVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAF-------- 142 (409)
T ss_dssp CCCTTCCHHHHHHHHHHHHHTSCCCCCGG----GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHH--------
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCCHH----HEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHH--------
Confidence 444455678887666777666664 444 37777776 577778888899999999999888776432
Q ss_pred cceeeeeeEeeecccCC-CCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcc---cHHHHHHHHHhcCCEEEEehhhhc
Q 022463 99 ISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVA-GASA-YARLY---DYERIRKVCNKQKAIMLADMAHIS 172 (297)
Q Consensus 99 ~~~~g~~~~~v~~~~~~-~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~---~~~~i~~la~~~g~~livD~a~~~ 172 (297)
+...|..+..+ +.++ +++.+ +++|++.+++ ++++|++ +++| +|.+. ++++|.++|+++|+++|+|++|+.
T Consensus 143 ~~~~g~~~~~v--~~~~~~~~~~-~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~ 218 (409)
T 2gb3_A 143 AKIAGVKLIPV--TRRMEEGFAI-PQNLESFINE-RTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSE 218 (409)
T ss_dssp HHHHTCEEEEE--ECCGGGTSCC-CTTGGGGCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTT
T ss_pred HHHcCCEEEEe--ccCCCCCCcc-HHHHHHhhCc-CCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccc
Confidence 22233334344 4442 23344 7889988877 8888888 6777 78765 478999999999999999999987
Q ss_pred ccccccCCC-CC-CCCccEEEecCCccCCCCC--ceEEEEec-CchhhccCCccchhhHHHHhhhcccCCCCCCCchHHH
Q 022463 173 GLVAAGVIP-SP-FEYADVVTTTTHKSLRGPR--GAMIFFRK-GVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTI 247 (297)
Q Consensus 173 g~~~~~~~~-~~-~~~~D~~~~s~~K~l~gp~--gG~i~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~ 247 (297)
+........ .. ..+.|++++|++|+++.|. .|++++++ ++ .+.+....... . +++.+..
T Consensus 219 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l--------------~~~l~~~~~~~-~-~~~~~~~ 282 (409)
T 2gb3_A 219 IVFRGEFASALSIESDKVVVIDSVSKKFSACGARVGCLITRNEEL--------------ISHAMKLAQGR-L-APPLLEQ 282 (409)
T ss_dssp CBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHH--------------HHHHHHHHHHS-C-CCCHHHH
T ss_pred cccCCCCCCccccCCCCEEEEecchhccCCccceEEEEEECcHHH--------------HHHHHHHHhcc-C-CCCHHHH
Confidence 543211111 00 1257999999999984333 49999887 42 22222221111 1 4556666
Q ss_pred HHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 248 TGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 248 ~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
+++.++|+. ... .+++++++.+++.+++.+.|++.
T Consensus 283 ~a~~~~l~~-~~~-~~~~~~~~~~~~~~~l~~~L~~~ 317 (409)
T 2gb3_A 283 IGSVGLLNL-DDS-FFDFVRETYRERVETVLKKLEEH 317 (409)
T ss_dssp HHHHHHHTC-CHH-HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhc-cHH-HHHHHHHHHHHHHHHHHHHHHHc
Confidence 666666643 223 57778888888888888888765
No 144
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.80 E-value=3.1e-18 Score=160.42 Aligned_cols=239 Identities=13% Similarity=0.048 Sum_probs=157.6
Q ss_pred CCccCCCchhHHHHHHHHHHHHHHHcC--CCCCCCcceEEecCChH-HHHHHHHHhc-CCCCeEEEecCCCCCccccccc
Q 022463 18 GARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGVNVQSLSGSP-SNFQVYTALL-KPHDRIMALDLPHGGHLSHGYQ 93 (297)
Q Consensus 18 ~~~~~~~~~~~~~~e~~~~~~la~~~g--~~~~~~~~~v~~~sG~~-~~~~~~~~~~-~~gd~Vl~~~~~~~~~~~~~~~ 93 (297)
+...|+......++++.+.+++.+..| +++++ |++++|++ ++..++.+++ ++||.|+++..+|++.....
T Consensus 126 ~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~----i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~~~-- 199 (500)
T 3tcm_A 126 ATGAYSHSQGIHGLRDAIASGIASRDGFPANADD----IFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASI-- 199 (500)
T ss_dssp CSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGG----EEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHHHH--
T ss_pred cCCCcCCCcChHHHHHHHHHHHHhhcCCCCCccc----EEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHHHH--
Confidence 355666667778899877788877766 44543 88888874 6666788887 79999999998877664432
Q ss_pred ccccccceeeeeeEeeecccCC-CCCcCCHHHHHHHhhhc-----CCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCC
Q 022463 94 TDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLF-----RPKLIVA-GASA-YARLYD---YERIRKVCNKQKA 162 (297)
Q Consensus 94 ~~~~~~~~~g~~~~~v~~~~~~-~~~~~d~~~l~~~l~~~-----~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~ 162 (297)
...|..+..+ ++++ .++.+|+++|++.+++. ++++|++ +++| +|.+.+ +++|.++|++||+
T Consensus 200 ------~~~g~~~~~~--~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~ 271 (500)
T 3tcm_A 200 ------ALHGGALVPY--YLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGL 271 (500)
T ss_dssp ------HHTTCEEEEE--ECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTC
T ss_pred ------HHcCCEEEEE--ecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCC
Confidence 2334334444 4443 34689999999999863 5788888 7888 898766 4567777999999
Q ss_pred EEEEehhhhcccccccCCCCCC-----------CCcc-EEEecCCccCC---CCCceEEEE---ecCchhhccCCccchh
Q 022463 163 IMLADMAHISGLVAAGVIPSPF-----------EYAD-VVTTTTHKSLR---GPRGAMIFF---RKGVKEINKQGKEVFY 224 (297)
Q Consensus 163 ~livD~a~~~g~~~~~~~~~~~-----------~~~D-~~~~s~~K~l~---gp~gG~i~~---~~~~~~~~~~g~~~~~ 224 (297)
++|+|+++.......+....++ ...+ +++.|++|++. |.++|++++ +++
T Consensus 272 ~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~------------- 338 (500)
T 3tcm_A 272 VLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAP------------- 338 (500)
T ss_dssp EEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTT-------------
T ss_pred EEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHH-------------
Confidence 9999999876443211111110 1122 56779999884 555598887 443
Q ss_pred hHHHHhhhcccCCCCCCCchHHHHHHHHHHH----------HHhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 225 DYEEKINQAVFPGLQGGPHNHTITGLAVALK----------QVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 225 ~~~~~~~~~~~~~~~~t~~~~~~~al~~al~----------~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
+.+.+..... ...+++.+..+++..+++ .+.+ ..+.++++.++.++++.+.|++++.++
T Consensus 339 -~~~~l~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~l~~~L~~~~g~~ 407 (500)
T 3tcm_A 339 -VREQIYKIAS--VNLCSNITGQILASLVMNPPKASDESYASYKA--EKDGILASLARRAKALEHAFNKLEGIT 407 (500)
T ss_dssp -HHHHHHHHHH--TTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTSTTEE
T ss_pred -HHHHHHHHHh--cccCCCHHHHHHHHHHhcCccccchhHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 3333332211 123455666666666654 1221 246677778888889999998886644
No 145
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.80 E-value=4.2e-19 Score=158.03 Aligned_cols=172 Identities=22% Similarity=0.223 Sum_probs=119.4
Q ss_pred cCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccc
Q 022463 21 YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKIS 100 (297)
Q Consensus 21 ~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~ 100 (297)
.|+..+...+++ +++++++|.+. .+++++|++++..++.++++|||+|+++..+|.+.+..... +.
T Consensus 33 ~y~~~~~~~~l~----~~la~~~g~~~-----~~~~~~gt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~-----~~ 98 (347)
T 1jg8_A 33 VYGEDPTINELE----RLAAETFGKEA-----ALFVPSGTMGNQVSIMAHTQRGDEVILEADSHIFWYEVGAM-----AV 98 (347)
T ss_dssp GGTCCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHHCCTTCEEEEETTCHHHHSSTTHH-----HH
T ss_pred ccCCChHHHHHH----HHHHHHhCCce-----EEEecCcHHHHHHHHHHhcCCCCEEEEcCcchhhhccccch-----hh
Confidence 454556677777 88999999864 37777888777778888899999999998777655432111 11
Q ss_pred eeeeeeEeeecccCCCCCcCCHHHHHHHhhhc-----CCcEEEE-cCCC-C-CCcccH---HHHHHHHHhcCCEEEEehh
Q 022463 101 AVSIFFETMPYRLNESTGYIDYDQLEKSATLF-----RPKLIVA-GASA-Y-ARLYDY---ERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 101 ~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~-----~~~~v~~-~~~~-~-G~~~~~---~~i~~la~~~g~~livD~a 169 (297)
..|..+ +++ .+ +++.+|++++++++++. +|++|++ +++| + |.+.|. ++|.++|++||+++|+|++
T Consensus 99 ~~g~~~--~~v-~~-~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a 174 (347)
T 1jg8_A 99 LSGVMP--HPV-PG-KNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGA 174 (347)
T ss_dssp HTCCEE--EEE-CE-ETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEET
T ss_pred ccCeEE--EEe-cC-CCCccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehh
Confidence 223223 333 22 35678999999999752 5788888 6777 6 887664 6888999999999999999
Q ss_pred hhccccc-ccCCCCCC-CCccEEEecCCccCCCCCceEEEEec
Q 022463 170 HISGLVA-AGVIPSPF-EYADVVTTTTHKSLRGPRGAMIFFRK 210 (297)
Q Consensus 170 ~~~g~~~-~~~~~~~~-~~~D~~~~s~~K~l~gp~gG~i~~~~ 210 (297)
|..+... .+....++ .++|.+++|+||++++|.|++++.++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~ 217 (347)
T 1jg8_A 175 RIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPVGSVVVGDR 217 (347)
T ss_dssp THHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCSSCEEEEECH
T ss_pred hhhcchhhcCCChHHhcccccEEEEecccccCCCceEEEEcCH
Confidence 8653211 11111111 15788889999999888776666665
No 146
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.80 E-value=4.7e-19 Score=159.61 Aligned_cols=232 Identities=11% Similarity=0.028 Sum_probs=154.3
Q ss_pred cCCCchhHHHHHHHHHHHHHHHcCCC--CCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCccccccccccc
Q 022463 21 YYGGNEYIDMAESLCQKRALEAFRLD--PEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTK 97 (297)
Q Consensus 21 ~~~~~~~~~~~e~~~~~~la~~~g~~--~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~ 97 (297)
.|+......++++.+.+++.+.+|++ +++ .+++++|+ +++..++++++++||+|+++...|++.....
T Consensus 58 ~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~---~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~p~y~~~~~~~------ 128 (376)
T 2dou_A 58 GYCLKSCTLPFLEEAARWYEGRYGVGLDPRR---EALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAA------ 128 (376)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHSCCCCTTT---SEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHH------
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc---cEEEcCCcHHHHHHHHHHhcCCCCEEEECCCCcHhHHHHH------
Confidence 34444567788866666666666875 231 38888887 4776688888999999999987776654322
Q ss_pred ccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCEEEEehhhhc
Q 022463 98 KISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYD---YERIRKVCNKQKAIMLADMAHIS 172 (297)
Q Consensus 98 ~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~livD~a~~~ 172 (297)
...|..+..+ +.+ +++.+|++++++.+++ ++++|++ +++| +|.+.| +++|.++|++||+++|+|++|+.
T Consensus 129 --~~~g~~~~~~--~~~-~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~ 202 (376)
T 2dou_A 129 --RVASLRTFLI--PLR-EDGLADLKAVPEGVWR-EAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVD 202 (376)
T ss_dssp --HHTTCEEEEE--CBC-TTSSBCGGGSCHHHHH-HEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGG
T ss_pred --HHcCCEEEEe--eCC-CCCCCCHHHHHHhhcc-CceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchh
Confidence 2233334344 342 5566899999999976 8899998 6777 787776 56888999999999999999986
Q ss_pred ccccc---cCCCC-CCCCccEEEecCCccCC--CCCceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHH
Q 022463 173 GLVAA---GVIPS-PFEYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHT 246 (297)
Q Consensus 173 g~~~~---~~~~~-~~~~~D~~~~s~~K~l~--gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~ 246 (297)
..... ..... ...+.++++.|++|+++ |.+.|+++.+++ +.+.+....... ..+.+.+.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~--------------~~~~l~~~~~~~-~~~~~~~~ 267 (376)
T 2dou_A 203 QVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSEE--------------ALARLERVKGVI-DFNQYAGV 267 (376)
T ss_dssp GBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECHH--------------HHHHHHHHHHHH-CCCSCHHH
T ss_pred cccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCHH--------------HHHHHHHHHHhc-ccCCCHHH
Confidence 54321 11100 00145788899999884 333499988773 333333221111 22345566
Q ss_pred HHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 247 ITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 247 ~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
.+++.++|+.. +. .+++.+++.+++.+++.+.|++.
T Consensus 268 ~~a~~~~l~~~-~~-~~~~~~~~~~~~~~~l~~~L~~~ 303 (376)
T 2dou_A 268 LRMGVEALKTP-KE-VVRGYARVYRERALGMAEALKGV 303 (376)
T ss_dssp HHHHHHHHTSC-HH-HHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHhCc-HH-HHHHHHHHHHHHHHHHHHHHHHh
Confidence 66666666542 23 56778888888999999998876
No 147
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.80 E-value=1.7e-18 Score=155.64 Aligned_cols=226 Identities=10% Similarity=0.050 Sum_probs=150.0
Q ss_pred HHHHHHHHHHHHHHcC--CCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeee
Q 022463 29 DMAESLCQKRALEAFR--LDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 105 (297)
Q Consensus 29 ~~~e~~~~~~la~~~g--~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 105 (297)
.++++.+.+++.+.+| ++++ .+++++|+ .++..++.+++++||+|+++...|++..... ...|..
T Consensus 61 ~~lr~~la~~~~~~~~~~~~~~----~i~~t~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~--------~~~g~~ 128 (377)
T 3fdb_A 61 SLLSQATAEFYADRYGYQARPE----WIFPIPDVVRGLYIAIDHFTPAQSKVIVPTPAYPPFFHLL--------SATQRE 128 (377)
T ss_dssp CCHHHHHHHHHHHHHCCCCCGG----GEEEESCHHHHHHHHHHHHSCTTCCEEEEESCCTHHHHHH--------HHHTCC
T ss_pred HHHHHHHHHHHHHHhCCCCCHH----HEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHHH--------HHcCCE
Confidence 5667555566666666 4454 38888887 4776788888999999999998887764322 223333
Q ss_pred eEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCEEEEehhhhcccccccCC
Q 022463 106 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVI 180 (297)
Q Consensus 106 ~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~livD~a~~~g~~~~~~~ 180 (297)
+..+ +.+++ +|++++++.+++ +++++++ +++| +|.+.| +++|.++|++||+++|+|++|+.........
T Consensus 129 ~~~~--~~~~~---~d~~~l~~~l~~-~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~ 202 (377)
T 3fdb_A 129 GIFI--DATGG---INLHDVEKGFQA-GARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHT 202 (377)
T ss_dssp EEEE--ECTTS---CCHHHHHHHHHT-TCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCC
T ss_pred EEEc--cCCCC---CCHHHHHHHhcc-CCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCC
Confidence 4334 45522 999999999998 7888888 7777 787775 5577777999999999999987643321011
Q ss_pred CCCCC-----CccEEEecCCccCCCC--CceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHHHH
Q 022463 181 PSPFE-----YADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVA 253 (297)
Q Consensus 181 ~~~~~-----~~D~~~~s~~K~l~gp--~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~a 253 (297)
..++. +.++++.|++|+++.| +.|++++.++ ++.+.+..... ....+++.+..+++.++
T Consensus 203 ~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~-------------~~~~~~~~~~~-~~~~~~~~~~~~a~~~~ 268 (377)
T 3fdb_A 203 VAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNP-------------SDAEHWQQLSP-VIKDGASTLGLIAAEAA 268 (377)
T ss_dssp CGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSH-------------HHHHHHHHSCH-HHHCCCCHHHHHHHHHH
T ss_pred cccHHHccCCCcEEEEEeChHhccCcchhheEEEeCCH-------------HHHHHHHHHHH-hhcCCCCHHHHHHHHHH
Confidence 11111 2348899999988332 3387777442 33443333211 11345566777777777
Q ss_pred HHHHhhhcChhhHHHHhhhhHHHHHhhccC-CCCcc
Q 022463 254 LKQVCTLITFSHIHVFSLHVYPAFVSNQNN-SENIE 288 (297)
Q Consensus 254 l~~~~~~~g~~~~~~~~~~l~~~l~~~l~~-~~~~~ 288 (297)
++.. +. .+++++++.+++.+++.+.|++ ++.++
T Consensus 269 l~~~-~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 302 (377)
T 3fdb_A 269 YRYG-TD-FLNQEVAYLKNNHDFLLHEIPKRIPGAK 302 (377)
T ss_dssp HHHC-HH-HHHHHHHHHHHHHHHHHHHHHHHSTTCE
T ss_pred Hhcc-HH-HHHHHHHHHHHHHHHHHHHHHhhCCCce
Confidence 7643 23 5678888888999999998887 66554
No 148
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.79 E-value=8.2e-18 Score=154.21 Aligned_cols=235 Identities=11% Similarity=0.085 Sum_probs=155.1
Q ss_pred CCCchhHHHHHHHHHHHHHHHcCCCC--------CCCcceEEecCChH-HHHHHHHHhcCCCCeEEEecCCCCCcccccc
Q 022463 22 YGGNEYIDMAESLCQKRALEAFRLDP--------EKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGY 92 (297)
Q Consensus 22 ~~~~~~~~~~e~~~~~~la~~~g~~~--------~~~~~~v~~~sG~~-~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~ 92 (297)
|+......++++.+.+++++.+|.+. .+ .|++|+|++ ++..++.+++++||+|+++...|++....
T Consensus 74 Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~---~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~-- 148 (425)
T 2r2n_A 74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQM---DLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQS-- 148 (425)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCE---EEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHH--
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCCccccccCCcC---cEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHH--
Confidence 44445557788888888888888764 12 499999984 66668888899999999998776665432
Q ss_pred cccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhh-----------cCCcEEEE--cCCC-CCCcccHH---HHHH
Q 022463 93 QTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-----------FRPKLIVA--GASA-YARLYDYE---RIRK 155 (297)
Q Consensus 93 ~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~-----------~~~~~v~~--~~~~-~G~~~~~~---~i~~ 155 (297)
+...|..+..+ +.+ ++ .+|+++|++.++. .++++|++ +++| +|.+.|.+ +|.+
T Consensus 149 ------~~~~g~~~~~v--~~~-~~-~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~ 218 (425)
T 2r2n_A 149 ------LHPLGCNIINV--ASD-ES-GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYE 218 (425)
T ss_dssp ------HGGGTCEEEEE--CEE-TT-EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHH
T ss_pred ------HHHcCCEEEEe--CcC-CC-CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHH
Confidence 22334334344 444 22 4899999999972 25888877 4667 79888766 9999
Q ss_pred HHHhcCCEEEEehhhhcccccc----cCCCCCCCCccEEEecCCccCCCCC--ceEEEEecCchhhccCCccchhhHHHH
Q 022463 156 VCNKQKAIMLADMAHISGLVAA----GVIPSPFEYADVVTTTTHKSLRGPR--GAMIFFRKGVKEINKQGKEVFYDYEEK 229 (297)
Q Consensus 156 la~~~g~~livD~a~~~g~~~~----~~~~~~~~~~D~~~~s~~K~l~gp~--gG~i~~~~~~~~~~~~g~~~~~~~~~~ 229 (297)
+|++||+++|+|++|+...... .+......+.++++.|++|+++ |. .|+++++++ +.+.
T Consensus 219 ~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~~~--------------l~~~ 283 (425)
T 2r2n_A 219 LARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPKP--------------LIER 283 (425)
T ss_dssp HHHHTTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEEHH--------------HHHH
T ss_pred HHHHcCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecCHH--------------HHHH
Confidence 9999999999999987432211 1111000134688899999985 43 299998874 3343
Q ss_pred hhhcccCCCCCCCchHHHHHHHHHHHHHhhh---cChhhHHHHhhhhHHHHHhhccC-CCCc
Q 022463 230 INQAVFPGLQGGPHNHTITGLAVALKQVCTL---ITFSHIHVFSLHVYPAFVSNQNN-SENI 287 (297)
Q Consensus 230 ~~~~~~~~~~~t~~~~~~~al~~al~~~~~~---~g~~~~~~~~~~l~~~l~~~l~~-~~~~ 287 (297)
+...... ...+++.+...++.++|+.+.+. ..+++++++.++..+++.+.|++ ++.+
T Consensus 284 l~~~~~~-~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 344 (425)
T 2r2n_A 284 VILHIQV-STLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGL 344 (425)
T ss_dssp HHHHHHT-TTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSS
T ss_pred HHHHHHH-hcCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 3332111 12355667777777777764321 13566677777778888887776 4443
No 149
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.79 E-value=3.2e-18 Score=157.29 Aligned_cols=233 Identities=12% Similarity=0.009 Sum_probs=147.8
Q ss_pred cCCCchhHHHHHHHHHHHHHHHcC----CCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCccccccccc
Q 022463 21 YYGGNEYIDMAESLCQKRALEAFR----LDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTD 95 (297)
Q Consensus 21 ~~~~~~~~~~~e~~~~~~la~~~g----~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~ 95 (297)
.|+......++++.+.+++.+..+ +++++ +++++|+ .++..++.+++++||.|+++...|+++......
T Consensus 81 ~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~~----v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~-- 154 (435)
T 3piu_A 81 LFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNH----LVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKW-- 154 (435)
T ss_dssp HCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGG----EEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTT--
T ss_pred ccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHHH----EEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHH--
Confidence 344445567888555555554433 55554 7777776 588878899999999999999888776542210
Q ss_pred ccccceeeeeeEeeecccCC-CCCcCCHHHHHHHhhhc-----CCcEEEE-cCCC-CCCcccH---HHHHHHHHhcCCEE
Q 022463 96 TKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLF-----RPKLIVA-GASA-YARLYDY---ERIRKVCNKQKAIM 164 (297)
Q Consensus 96 ~~~~~~~g~~~~~v~~~~~~-~~~~~d~~~l~~~l~~~-----~~~~v~~-~~~~-~G~~~~~---~~i~~la~~~g~~l 164 (297)
..|..+..+ +.++ ..+.+|++++++.+++. ++++|++ +++| +|.+.|. ++|.++|++||+++
T Consensus 155 -----~~g~~~~~~--~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~l 227 (435)
T 3piu_A 155 -----RTGVEIVPI--HCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHL 227 (435)
T ss_dssp -----TTCCEEEEE--ECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEE
T ss_pred -----hcCCEEEEe--eCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEE
Confidence 223334344 3432 24568999999999752 6788887 6777 7877665 68888899999999
Q ss_pred EEehhhhcccccccCCCCCC---------------CCccEEEecCCccCC--CCCceEEEEecCchhhccCCccchhhHH
Q 022463 165 LADMAHISGLVAAGVIPSPF---------------EYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYE 227 (297)
Q Consensus 165 ivD~a~~~g~~~~~~~~~~~---------------~~~D~~~~s~~K~l~--gp~gG~i~~~~~~~~~~~~g~~~~~~~~ 227 (297)
|+|++|+.+........ +. ....+++.|++|+++ |.+.|+++++++ .+.
T Consensus 228 i~Dea~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~-------------~~~ 293 (435)
T 3piu_A 228 ISDEIYSGTAFSSPSFI-SVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDD-------------MVV 293 (435)
T ss_dssp EEECTTGGGCCSSSCCC-CHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCH-------------HHH
T ss_pred EEeccccccccCCCCCc-CHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCH-------------HHH
Confidence 99999976443221111 10 012288899999884 233499988553 233
Q ss_pred HHhhhcccCCCCCCCchHHHHHHHHHHHHHh--hhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 228 EKINQAVFPGLQGGPHNHTITGLAVALKQVC--TLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 228 ~~~~~~~~~~~~~t~~~~~~~al~~al~~~~--~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
+.+...... ++.+.+..+++.++++... +. .+++.+++.++..+++.+.|++.
T Consensus 294 ~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 348 (435)
T 3piu_A 294 AAATKMSSF---GLVSSQTQHLLSAMLSDKKLTKN-YIAENHKRLKQRQKKLVSGLQKS 348 (435)
T ss_dssp HHHHHHGGG---SCCCHHHHHHHHHHHHCHHHHHH-HHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhhc---CCCCHHHHHHHHHHhcChHHHHH-HHHHHHHHHHHHHHHHHHHHHhc
Confidence 333322111 2234444455555554222 22 34667777888888888888775
No 150
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.79 E-value=1.5e-18 Score=159.21 Aligned_cols=246 Identities=13% Similarity=0.072 Sum_probs=156.7
Q ss_pred CCCchhHHHHHHHHHHHHHHHcCC--CCCCCcceEEecCChH-HHHHHHHHhc--CCCC--eEEEecCCCCCcccccccc
Q 022463 22 YGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALL--KPHD--RIMALDLPHGGHLSHGYQT 94 (297)
Q Consensus 22 ~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~~v~~~sG~~-~~~~~~~~~~--~~gd--~Vl~~~~~~~~~~~~~~~~ 94 (297)
|+......++++.+.+++.+.+|. +++ .+++++|++ ++..++.+++ ++|| +|+++..+|.+.....
T Consensus 78 y~~~~g~~~lr~~la~~~~~~~g~~~~~~----~i~~t~g~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~--- 150 (437)
T 3g0t_A 78 YPNLDGLPELKQEASRFAKLFVNIDIPAR----ACVPTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQC--- 150 (437)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCCCCGG----GEEEESHHHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHHHH---
T ss_pred CCCCCChHHHHHHHHHHHHHhhCCCCCcc----cEEEeCCHHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHHHH---
Confidence 333344578886666666666554 444 388888874 7766888888 9999 9999987776654322
Q ss_pred cccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCEEEEehh
Q 022463 95 DTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYD---YERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 95 ~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~livD~a 169 (297)
...|..+..++ .+++++.+|++++++++.+.++++|++ +++| +|.+.| +++|.++|++||+++|+|++
T Consensus 151 -----~~~g~~~~~v~--~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~ 223 (437)
T 3g0t_A 151 -----RILGQKFESFD--LFEYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLA 223 (437)
T ss_dssp -----HHHTCCCEEEE--GGGGCTTHHHHHHHHHHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred -----HHcCCEEEEEe--ecCCCCccCHHHHHHHHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcc
Confidence 22333344444 443566789999999994338999988 7877 788776 66789999999999999999
Q ss_pred hhcccccccCCC-------CCC---CCccEEEecCCccCCC--CCceEEEEecCchh-h---ccC--CccchhhHHHHhh
Q 022463 170 HISGLVAAGVIP-------SPF---EYADVVTTTTHKSLRG--PRGAMIFFRKGVKE-I---NKQ--GKEVFYDYEEKIN 231 (297)
Q Consensus 170 ~~~g~~~~~~~~-------~~~---~~~D~~~~s~~K~l~g--p~gG~i~~~~~~~~-~---~~~--g~~~~~~~~~~~~ 231 (297)
|+.......... ..+ .+.++++.|++|+++. .+.|+++++++... + +.. ++..+ ....+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 301 (437)
T 3g0t_A 224 YFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISGKLYEREYPDLEESFGRLRF--GEALSS 301 (437)
T ss_dssp TTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEECHHHHHCBCGGGHHHHSCSBH--HHHHHT
T ss_pred hhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEECHHHhhhhhhcccccccccch--hHHHHH
Confidence 975333210000 011 1566889999998742 23399998874321 1 000 00000 000022
Q ss_pred hcccCCCCCCCchHHHHHHHHHHHHHhhh-cChhhHHHHhhhhHHHHHhhccCC
Q 022463 232 QAVFPGLQGGPHNHTITGLAVALKQVCTL-ITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 232 ~~~~~~~~~t~~~~~~~al~~al~~~~~~-~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
.... ....+++.+..+++.++|+..... ..+++++++.+++.+++.+.|+++
T Consensus 302 ~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 354 (437)
T 3g0t_A 302 SALY-ALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDN 354 (437)
T ss_dssp THHH-HHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHh-hhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 1110 012355667777777777765421 027888999999999999999887
No 151
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.79 E-value=2.7e-18 Score=154.43 Aligned_cols=227 Identities=12% Similarity=-0.031 Sum_probs=151.6
Q ss_pred cCCCchhHHHHHHHHHHHHHHHcCC--CCCCCcceEEecCCh-HHHHHHHHHhcCC--CCeEEEecCCCCCccccccccc
Q 022463 21 YYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGS-PSNFQVYTALLKP--HDRIMALDLPHGGHLSHGYQTD 95 (297)
Q Consensus 21 ~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~~v~~~sG~-~~~~~~~~~~~~~--gd~Vl~~~~~~~~~~~~~~~~~ 95 (297)
.|+......++++.+.+++++.+|+ ++++ +++++|+ .++..++.+++++ ||+|+++...|.+....
T Consensus 54 ~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~----i~~t~g~~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~~----- 124 (376)
T 3ezs_A 54 IYPKSAFEESLRAAQRGFFKRRFKIELKENE----LISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGA----- 124 (376)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHHSCCCCGGG----EEEESSSHHHHHHHHHHHTTTCSSCEEEEEESCCTHHHHH-----
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCCHHH----EEECcCcHHHHHHHHHHHcCCCCCCEEEEecCCcHhHHHH-----
Confidence 3444445678887777888888887 5543 8887777 5776688888999 99999999877765432
Q ss_pred ccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCEEEEehhh
Q 022463 96 TKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYD---YERIRKVCNKQKAIMLADMAH 170 (297)
Q Consensus 96 ~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~livD~a~ 170 (297)
+...|..+..+ +.+ .+..+++ ++++.+.+ ++++|++ +++| +|.+.| +++|.++|++||+++|+|++|
T Consensus 125 ---~~~~g~~~~~~--~~~-~~~~~~~-~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~ 196 (376)
T 3ezs_A 125 ---AKFIKAKSLLM--PLT-KENDFTP-SLNEKELQ-EVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECY 196 (376)
T ss_dssp ---HHHTTCEEEEE--ECC-GGGTSCC-CCCHHHHH-HCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTT
T ss_pred ---HHHcCCEEEEc--ccC-CCCCcch-hHHhhhcc-CCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccc
Confidence 22233334344 444 2223444 67777776 8999999 6777 788877 557777799999999999998
Q ss_pred hcccccccCCCC-C--------CCCccEEEecCCccCC--CCCceEEEEecCchhhccCCccchhhHHHHhhhcccCCCC
Q 022463 171 ISGLVAAGVIPS-P--------FEYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQ 239 (297)
Q Consensus 171 ~~g~~~~~~~~~-~--------~~~~D~~~~s~~K~l~--gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 239 (297)
+........... . ..+.++++.|++|+++ |.+.|+++.++ ++.+.+..... ...
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------------~~~~~~~~~~~-~~~ 261 (376)
T 3ezs_A 197 SEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDS--------------RLLEKYKAFRA-YLG 261 (376)
T ss_dssp TTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEECH--------------HHHHHHHHHHT-TTC
T ss_pred hhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeCH--------------HHHHHHHHHHh-hhc
Confidence 764332110000 0 0156789999999883 22338888876 34444433221 123
Q ss_pred CCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhcc
Q 022463 240 GGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQN 282 (297)
Q Consensus 240 ~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~ 282 (297)
.+++.+..+++.++++. .. .+++.+++.+++.+++.+.|+
T Consensus 262 ~~~~~~~~~a~~~~l~~--~~-~~~~~~~~~~~~~~~l~~~l~ 301 (376)
T 3ezs_A 262 YTSANAIQKASEAAWLD--DR-HAEFFRNIYANNLKLARKIFK 301 (376)
T ss_dssp CCCCHHHHHHHHHHHHC--SH-HHHHHHHHHHHHHHHHHHHST
T ss_pred CCCChHHHHHHHHHHhC--cH-HHHHHHHHHHHHHHHHHHHhc
Confidence 45566777777777764 22 578888889999999999887
No 152
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.79 E-value=1.2e-18 Score=160.80 Aligned_cols=234 Identities=12% Similarity=0.144 Sum_probs=157.8
Q ss_pred cCCCchhHHHHHHHHHHHHHHHcCCC--CCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCccccccccccc
Q 022463 21 YYGGNEYIDMAESLCQKRALEAFRLD--PEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTK 97 (297)
Q Consensus 21 ~~~~~~~~~~~e~~~~~~la~~~g~~--~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~ 97 (297)
.|+......++++.+.+++.+.+|.+ ++ .|++++|+ .++..++++++++||+|+++...|++.....
T Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~----~v~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~------ 159 (447)
T 3b46_A 90 QYSPTRGRPSLINSLIKLYSPIYNTELKAE----NVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNI------ 159 (447)
T ss_dssp SCCCTTCCHHHHHHHHHHHTTTTTSCCCGG----GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHH------
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCCChh----hEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHHHHH------
Confidence 44444456788877667777767753 33 38888887 5777788889999999999998877754322
Q ss_pred ccceeeeeeEeeecccCCC-----------CCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcc---cHHHHHHHHHhcC
Q 022463 98 KISAVSIFFETMPYRLNES-----------TGYIDYDQLEKSATLFRPKLIVA-GASA-YARLY---DYERIRKVCNKQK 161 (297)
Q Consensus 98 ~~~~~g~~~~~v~~~~~~~-----------~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~---~~~~i~~la~~~g 161 (297)
...|..+..++ .+++ ++.+|+++|++.+++ ++++|++ +++| +|.+. ++++|.++|++||
T Consensus 160 --~~~g~~~~~v~--~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~ 234 (447)
T 3b46_A 160 --ELCGGKVVYVP--INPPKELDQRNTRGEEWTIDFEQFEKAITS-KTKAVIINTPHNPIGKVFTREELTTLGNICVKHN 234 (447)
T ss_dssp --HHTTCEEEEEE--EECCGGGGTSCBCSTTSEECHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTT
T ss_pred --HHcCCEEEEEe--CCCccccccccccccCcccCHHHHHHhhcc-CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcC
Confidence 22333343443 3322 467999999999986 8899888 6777 78775 5889999999999
Q ss_pred CEEEEehhhhcccccccCCC-CCC----CCccEEEecCCccCCCC--CceEEEE-ecCchhhccCCccchhhHHHHhhhc
Q 022463 162 AIMLADMAHISGLVAAGVIP-SPF----EYADVVTTTTHKSLRGP--RGAMIFF-RKGVKEINKQGKEVFYDYEEKINQA 233 (297)
Q Consensus 162 ~~livD~a~~~g~~~~~~~~-~~~----~~~D~~~~s~~K~l~gp--~gG~i~~-~~~~~~~~~~g~~~~~~~~~~~~~~ 233 (297)
+++|+|++++.......... ..+ .+.|+++.|++|+++.| +.|++++ +++ +.+.+...
T Consensus 235 ~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~~--------------l~~~l~~~ 300 (447)
T 3b46_A 235 VVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNAE--------------LLSYAAKA 300 (447)
T ss_dssp CEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCHH--------------HHHHHHHH
T ss_pred cEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCHH--------------HHHHHHHH
Confidence 99999999875332111000 011 15789999999988533 3499998 663 33333221
Q ss_pred ccCCCCCCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 234 VFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 234 ~~~~~~~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
... ...+.+.+..+++.++|+.......+++++++.+++.+++.+.|+++
T Consensus 301 ~~~-~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 350 (447)
T 3b46_A 301 HTR-ICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDEL 350 (447)
T ss_dssp HHH-HTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Hhh-ccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 100 02244566677777888766433247778888888888888888765
No 153
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.78 E-value=1.9e-18 Score=154.46 Aligned_cols=228 Identities=11% Similarity=0.083 Sum_probs=139.7
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCe--EEEecCCCCCccccccccccc
Q 022463 20 RYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDR--IMALDLPHGGHLSHGYQTDTK 97 (297)
Q Consensus 20 ~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~--Vl~~~~~~~~~~~~~~~~~~~ 97 (297)
..|+..+...+++ ++++++++.+. .+++++|+.++..++++++.+||. |+++...|........ .
T Consensus 42 ~~~~~~~~~~~l~----~~la~~~~~~~-----~i~~~~g~~a~~~a~~~~~~~g~~~vvi~~~~~~~~~~~~~~-~--- 108 (359)
T 3pj0_A 42 DIYGNGAVIEDFE----TKIAKILGKQS-----AVFFPSGTMAQQIALRIWADRKENRRVAYHPLSHLEIHEQDG-L--- 108 (359)
T ss_dssp CBTTBSHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTH-H---
T ss_pred CcccCCHHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHHhcCCCcEEEEeccceeeehhcch-H---
Confidence 3455556777777 88999999875 277788888887788888888886 5544433332221110 0
Q ss_pred ccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-C-CCcccHHHH---HHHHHhcCCEEEEehhhh
Q 022463 98 KISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-Y-ARLYDYERI---RKVCNKQKAIMLADMAHI 171 (297)
Q Consensus 98 ~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~-G~~~~~~~i---~~la~~~g~~livD~a~~ 171 (297)
....|..+ ++++. +++.+|+++++++ .+ ++++|++ +++| + |.+.|.+++ .++|++||+++|+|+++.
T Consensus 109 -~~~~g~~~--~~v~~--~~~~~d~~~l~~~-~~-~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~ 181 (359)
T 3pj0_A 109 -KELQQITP--LLLGT--ANQLLTIDDIKSL-RE-PVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARL 181 (359)
T ss_dssp -HHHHCCEE--EECSC--TTSCCCHHHHHTC-SS-CCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTC
T ss_pred -HHhcCceE--EecCC--cCCCcCHHHHHhc-cC-CceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcch
Confidence 01223333 33343 4578999999988 54 8999999 5655 4 677776655 999999999999999876
Q ss_pred cccccc-cCCCCCC-CCccEEEecCCccCCCCCceEEEEecCchhhccCCccchhhHHHHhhhcc--cCCCCCCCchHHH
Q 022463 172 SGLVAA-GVIPSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV--FPGLQGGPHNHTI 247 (297)
Q Consensus 172 ~g~~~~-~~~~~~~-~~~D~~~~s~~K~l~gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~t~~~~~~ 247 (297)
.+.... +....++ .++|++++|+||++++|.||+++.+++ +.+.+.... ......+.+....
T Consensus 182 ~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~gg~~~~~~~--------------l~~~~~~~~~~~~~~~~~~~~~~~ 247 (359)
T 3pj0_A 182 WEITPFYQKSAEEICALFDSVYVSFYKGIGGIAGAILAGNDD--------------FVQEAKIWKRRYGGDLISLYPYIL 247 (359)
T ss_dssp GGGHHHHTCCHHHHHTTCSEEEEESSSTTCCSSCEEEEECHH--------------HHHHHHHHHHHTTCCCSCCHHHHH
T ss_pred hcchhhhCCCHHHhhccCCEEEEeccccCCCcceEEEECCHH--------------HHHHHHHHHHHhCCCcchhHHHHH
Confidence 544211 1111000 167999999999999887777777773 344333211 1111111222222
Q ss_pred HHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 248 TGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 248 ~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
++ ..+++.. .+.+. +..+..+++.+.|++++.++
T Consensus 248 a~-~~~l~~~-----~~~~~-~~~~~~~~l~~~L~~~~g~~ 281 (359)
T 3pj0_A 248 SA-DYYFEKR-----IGKMA-EYFEAAKGLAERFNSCSGVK 281 (359)
T ss_dssp HH-HHHHHHH-----GGGHH-HHHHHHHHHHHHHHTSTTEE
T ss_pred HH-HHHHHHH-----HHHhH-HHHHHHHHHHHHHhhCCCce
Confidence 22 2344333 23333 34667778888888887654
No 154
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.78 E-value=1.2e-18 Score=158.13 Aligned_cols=221 Identities=14% Similarity=0.019 Sum_probs=143.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChH-HHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeee
Q 022463 27 YIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 105 (297)
Q Consensus 27 ~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~-~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 105 (297)
...+++ +.+++++|+++++ +++++|++ ++..++.+++++||+|+++...|++..... ...|..
T Consensus 75 ~~~~l~----~~la~~~g~~~~~----v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~--------~~~g~~ 138 (397)
T 2zyj_A 75 GYAPLR----AFVAEWIGVRPEE----VLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAF--------RLQGPR 138 (397)
T ss_dssp CCHHHH----HHHHHHHTSCGGG----EEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHH--------HTTCCE
T ss_pred CCHHHH----HHHHHHhCCChhh----EEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHH--------HHcCCE
Confidence 445666 7788888877654 88888884 666688888999999999987777654322 222333
Q ss_pred eEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE--cCCC-CCCcccHH---HHHHHHHhcCCEEEEehhhhcccccccC
Q 022463 106 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA--GASA-YARLYDYE---RIRKVCNKQKAIMLADMAHISGLVAAGV 179 (297)
Q Consensus 106 ~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~--~~~~-~G~~~~~~---~i~~la~~~g~~livD~a~~~g~~~~~~ 179 (297)
+..+ +.++ + .+|++++++.+++.++++|++ +++| +|.+.|.+ +|.++|++||+++|+|++|+........
T Consensus 139 ~~~~--~~~~-~-~~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~ 214 (397)
T 2zyj_A 139 FLTV--PAGE-E-GPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEAR 214 (397)
T ss_dssp EEEE--EEET-T-EECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCC
T ss_pred EEec--CcCC-C-CCCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCC
Confidence 4344 3442 3 389999999998657888754 5666 78877755 8999999999999999999865432111
Q ss_pred CCCCCC--Cc------cEEEecCCccCCCCC--ceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHH
Q 022463 180 IPSPFE--YA------DVVTTTTHKSLRGPR--GAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITG 249 (297)
Q Consensus 180 ~~~~~~--~~------D~~~~s~~K~l~gp~--gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a 249 (297)
..++. +. .+++.|++|+++ |. .|+++++++ +.+.+.........++ +.+...+
T Consensus 215 -~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~--------------~~~~l~~~~~~~~~~~-~~~~~~a 277 (397)
T 2zyj_A 215 -LPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVAFAVAHPE--------------ALQKLVQAKQGADLHT-PMLNQML 277 (397)
T ss_dssp -CCCHHHHHHHHTCCCEEEEEESTTTTC-GGGCCEEEECCHH--------------HHHHHHHHHHHHHSSC-CHHHHHH
T ss_pred -CCchhhhCcccCCCeEEEEeccccccc-ccceeEEEecCHH--------------HHHHHHHHHHhhcCCC-CHHHHHH
Confidence 11111 22 278899999987 42 299998863 3333322111111122 4455555
Q ss_pred HHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccC-CC
Q 022463 250 LAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNN-SE 285 (297)
Q Consensus 250 l~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~-~~ 285 (297)
+.++|+..... .+++++++.++..+++.+.|++ ++
T Consensus 278 ~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~ 313 (397)
T 2zyj_A 278 VHELLKEGFSE-RLERVRRVYREKAQAMLHALDREVP 313 (397)
T ss_dssp HHHHHTTTHHH-HHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHhCCHH-HHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 55555432112 4667777777888888888876 45
No 155
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.78 E-value=1.7e-18 Score=158.25 Aligned_cols=236 Identities=11% Similarity=0.064 Sum_probs=157.4
Q ss_pred cCCCchhHHHHHHHHHHHHHHHcCCC--CCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCccccccccccc
Q 022463 21 YYGGNEYIDMAESLCQKRALEAFRLD--PEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTK 97 (297)
Q Consensus 21 ~~~~~~~~~~~e~~~~~~la~~~g~~--~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~ 97 (297)
.|+......++++.+.+++.+.+|.+ +++ .+++++|+ .++..++.+++++||+|+++...|++.....
T Consensus 62 ~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~---~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~------ 132 (422)
T 3fvs_A 62 QYTKTFGYPPLTKILASFFGELLGQEIDPLR---NVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMT------ 132 (422)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHHTCCCCHHH---HEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHH------
T ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCCCCCC---cEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHHHH------
Confidence 34444455778877778888877764 311 38888887 5776788888999999999998877754322
Q ss_pred ccceeeeeeEeeeccc----C-----CCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcc---cHHHHHHHHHhcCCE
Q 022463 98 KISAVSIFFETMPYRL----N-----ESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLY---DYERIRKVCNKQKAI 163 (297)
Q Consensus 98 ~~~~~g~~~~~v~~~~----~-----~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~---~~~~i~~la~~~g~~ 163 (297)
...|..+..+++.. + ..++.+|++++++.+++ ++++|++ +++| +|.+. ++++|.++|++||++
T Consensus 133 --~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~ 209 (422)
T 3fvs_A 133 --MMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTS-RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVV 209 (422)
T ss_dssp --HHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCE
T ss_pred --HHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcCC-CceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcE
Confidence 22233343443322 0 02457899999999987 8899888 7777 78877 588999999999999
Q ss_pred EEEehhhhcccccc----cCCCCCC-CCccEEEecCCccCC--CCCceEEEEecCchhhccCCccchhhHHHHhhhcccC
Q 022463 164 MLADMAHISGLVAA----GVIPSPF-EYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFP 236 (297)
Q Consensus 164 livD~a~~~g~~~~----~~~~~~~-~~~D~~~~s~~K~l~--gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 236 (297)
+|+|++|+...... .+..... .+.++++.|++|+++ |.+.|+++.+++ +.+.+......
T Consensus 210 li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~--------------~~~~~~~~~~~ 275 (422)
T 3fvs_A 210 CITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDH--------------IMKHLRTVHQN 275 (422)
T ss_dssp EEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCHH--------------HHHHHHHHHHT
T ss_pred EEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEEEEEeCHH--------------HHHHHHHHHhh
Confidence 99999987533221 1111100 134588899999874 233399988773 33333322111
Q ss_pred CCCCCCchHHHHHHHHHHHHH------hhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 237 GLQGGPHNHTITGLAVALKQV------CTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 237 ~~~~t~~~~~~~al~~al~~~------~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
...+.+.+..+++.++++.. .+. .+++++++.+++.+++.+.|++.
T Consensus 276 -~~~~~~~~~~~a~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 327 (422)
T 3fvs_A 276 -SVFHCPTQSQAAVAESFEREQLLFRQPSS-YFVQFPQAMQRCRDHMIRSLQSV 327 (422)
T ss_dssp -TTCCCCHHHHHHHHHHHHHHHHTTTCTTC-HHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -ccCCCCcHHHHHHHHHHhhccccccchHH-HHHHHHHHHHHHHHHHHHHHHHc
Confidence 12345667777777777641 123 56788888889999999999876
No 156
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.78 E-value=5.5e-18 Score=151.98 Aligned_cols=217 Identities=12% Similarity=0.003 Sum_probs=144.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcceEEecCChH-HHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeeee
Q 022463 28 IDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFF 106 (297)
Q Consensus 28 ~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~-~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 106 (297)
..+++ +.+++++++++++ +++++|++ ++..++.++ +||+|+++...|++..... ...|..+
T Consensus 61 ~~~l~----~~la~~~~~~~~~----v~~~~g~~~al~~~~~~~--~gd~vl~~~p~y~~~~~~~--------~~~g~~~ 122 (364)
T 1lc5_A 61 YFHLH----QALARHHQVPASW----ILAGNGETESIFTVASGL--KPRRAMIVTPGFAEYGRAL--------AQSGCEI 122 (364)
T ss_dssp CHHHH----HHHHHHHTSCGGG----EEEESSHHHHHHHHHHHH--CCSEEEEEESCCTHHHHHH--------HHTTCEE
T ss_pred HHHHH----HHHHHHHCcCHHH----EEECCCHHHHHHHHHHHc--CCCeEEEeCCCcHHHHHHH--------HHcCCeE
Confidence 45666 8888899987654 88888874 665566666 7799999988777654322 2223334
Q ss_pred EeeecccCCCCCcCC-HHHHHHHhhhcCCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCEEEEehhhhccccc----
Q 022463 107 ETMPYRLNESTGYID-YDQLEKSATLFRPKLIVA-GASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVA---- 176 (297)
Q Consensus 107 ~~v~~~~~~~~~~~d-~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~livD~a~~~g~~~---- 176 (297)
..+ +.+++ ..++ ++++.+.+++ ++++|++ +++| +|.+.| +++|.++|++||+++|+|++|+.....
T Consensus 123 ~~v--~~~~~-~~~~~l~~~~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 198 (364)
T 1lc5_A 123 RRW--SLREA-DGWQLTDAILEALTP-DLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGF 198 (364)
T ss_dssp EEE--ECCGG-GTTCCCTTHHHHCCT-TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCS
T ss_pred EEE--eCCcc-cccchhHHHHHhccC-CCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccch
Confidence 334 34321 1233 4556666654 7898887 7777 798888 889999999999999999999764431
Q ss_pred ccCCCCCCCCccEEEecCCccCCCC--CceEEE-EecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHHHH
Q 022463 177 AGVIPSPFEYADVVTTTTHKSLRGP--RGAMIF-FRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVA 253 (297)
Q Consensus 177 ~~~~~~~~~~~D~~~~s~~K~l~gp--~gG~i~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~a 253 (297)
..... ..+.|+++.|++|+++.| +.|+++ .++ ++.+.+..... ..+++.+..+++.++
T Consensus 199 ~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~--------------~~~~~l~~~~~---~~~~~~~~~~~~~~~ 259 (364)
T 1lc5_A 199 IPALK--DNPHIWVLRSLTKFYAIPGLRLGYLVNSDD--------------AAMARMRRQQM---PWSVNALAALAGEVA 259 (364)
T ss_dssp GGGCT--TCTTEEEEEESTTTTTCTTTCCEEEECCCH--------------HHHHHHHHHSC---TTCSCHHHHHHHHHG
T ss_pred hhHhc--cCCCEEEEEECchhhcCCccceEEEEECCH--------------HHHHHHHHhCC---CCCCCHHHHHHHHHH
Confidence 11101 015688999999998533 349988 666 34444443321 234566666666555
Q ss_pred HHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 254 LKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 254 l~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
|+. .. .+++++++.+++.+++.+.|++++.++
T Consensus 260 l~~--~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~ 291 (364)
T 1lc5_A 260 LQD--SA-WQQATWHWLREEGARFYQALCQLPLLT 291 (364)
T ss_dssp GGC--HH-HHHHHHHHHHHHHHHHHHHHHTSTTEE
T ss_pred HhC--cH-HHHHHHHHHHHHHHHHHHHHhcCCCCE
Confidence 543 12 577888888889999999998887655
No 157
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.77 E-value=8.1e-18 Score=155.45 Aligned_cols=231 Identities=12% Similarity=0.010 Sum_probs=148.4
Q ss_pred CCCchhHHHHHHHHHHHHHHHcCC-CCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCccccccccccccc
Q 022463 22 YGGNEYIDMAESLCQKRALEAFRL-DPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKI 99 (297)
Q Consensus 22 ~~~~~~~~~~e~~~~~~la~~~g~-~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~ 99 (297)
|+......++++.+.+++.+.+|. +++ .+++++|+ +++..++.+++++||+|+++...|++.....
T Consensus 114 Y~~~~g~~~lr~~ia~~~~~~~g~~~~~----~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~-------- 181 (448)
T 3aow_A 114 YGTTKGFTPLRETLMKWLGKRYGISQDN----DIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAF-------- 181 (448)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCCTTS----EEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHH--------
T ss_pred CCCCCCcHHHHHHHHHHHHHhcCcCChh----hEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHH--------
Confidence 444445677886555666555588 454 48888888 4776688888999999999997777654322
Q ss_pred ceeeeeeEeeecccCCCCCcCCHHHHHHHhh----h-cCCcEEEE--cCCC-CCCccc---HHHHHHHHHhcCCEEEEeh
Q 022463 100 SAVSIFFETMPYRLNESTGYIDYDQLEKSAT----L-FRPKLIVA--GASA-YARLYD---YERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 100 ~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~----~-~~~~~v~~--~~~~-~G~~~~---~~~i~~la~~~g~~livD~ 168 (297)
...|..+..+ +.++ + .+|++.|++.++ + .+|++|++ +++| +|.+.+ +++|.++|++||+++|+|+
T Consensus 182 ~~~g~~~~~v--~~~~-~-g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De 257 (448)
T 3aow_A 182 NFYEPQYIQI--PLDD-E-GMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDD 257 (448)
T ss_dssp HTTCCEEEEE--EEET-T-EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHcCCEEEEe--ccCC-C-CCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEEC
Confidence 2233334334 4442 3 389999999997 3 26888865 5677 787776 4689999999999999999
Q ss_pred hhhcccccccCCCC--CC--CCccEEEecCCccCCCCC--ceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCC
Q 022463 169 AHISGLVAAGVIPS--PF--EYADVVTTTTHKSLRGPR--GAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGP 242 (297)
Q Consensus 169 a~~~g~~~~~~~~~--~~--~~~D~~~~s~~K~l~gp~--gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~ 242 (297)
+++........... .+ .+.++++.|++|+++ |. .|+++++++ +.+.+....... ..++
T Consensus 258 ~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~-~GlriG~v~~~~~--------------l~~~l~~~~~~~-~~~~ 321 (448)
T 3aow_A 258 PYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILA-PGFRIGWMVGDPG--------------IIRKMEIAKQST-DLCT 321 (448)
T ss_dssp SCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTC-GGGCCEEEEECHH--------------HHHHHHHHHHHH-HSSC
T ss_pred CCccccCCCCCCcCHHhcCCCCCEEEEccchhhcc-ccccEEEEEeCHH--------------HHHHHHHHHHHh-cCCC
Confidence 98765432111000 01 145688999999986 43 399999874 333332211111 1123
Q ss_pred chHHHHHHHHHHHHH-hhhcChhhHHHHhhhhHHHHHhhccC-CC
Q 022463 243 HNHTITGLAVALKQV-CTLITFSHIHVFSLHVYPAFVSNQNN-SE 285 (297)
Q Consensus 243 ~~~~~~al~~al~~~-~~~~g~~~~~~~~~~l~~~l~~~l~~-~~ 285 (297)
+.+...++.++|+.. ... .+++++++.++..+++.+.|++ ++
T Consensus 322 ~~~~q~a~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~ 365 (448)
T 3aow_A 322 NVFGQVVAWRYVDGGYLEK-HIPEIRKFYKPRRDAMLEALEEFMP 365 (448)
T ss_dssp CHHHHHHHHHHHHTTHHHH-HHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHhCCHHH-HHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 555555555556532 112 4566777777888888888876 45
No 158
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.77 E-value=4.6e-18 Score=154.68 Aligned_cols=235 Identities=13% Similarity=0.037 Sum_probs=154.2
Q ss_pred CCCchhHHHHHHHHHHHHHHHcCC--CCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccc
Q 022463 22 YGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKK 98 (297)
Q Consensus 22 ~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~ 98 (297)
|+......++++.+.+++.+.+|. ++++ .+++++|+ .++..++.+++++||+|+++...|.+.....
T Consensus 57 y~~~~g~~~l~~~la~~~~~~~~~~~~~~~---~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~------- 126 (410)
T 3e2y_A 57 YTRGFGHPALVKALSCLYGKIYQRQIDPNE---EILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMV------- 126 (410)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHTSCCCTTT---SEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHH-------
T ss_pred CCCCCChHHHHHHHHHHHHHHhCCCCCCCC---CEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHH-------
Confidence 333344577887666777776665 3412 38888887 5777788888999999999988777664322
Q ss_pred cceeeeeeEeeeccc--------CCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCc---ccHHHHHHHHHhcCCEEE
Q 022463 99 ISAVSIFFETMPYRL--------NESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARL---YDYERIRKVCNKQKAIML 165 (297)
Q Consensus 99 ~~~~g~~~~~v~~~~--------~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~---~~~~~i~~la~~~g~~li 165 (297)
...|..+..+++.. ...++.+|++++++.+++ ++++|++ +++| +|.+ .++++|.++|++||+++|
T Consensus 127 -~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li 204 (410)
T 3e2y_A 127 -RMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSS-KTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCI 204 (410)
T ss_dssp -HHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred -HHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCC-CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEE
Confidence 22233343443331 113456899999999987 8999988 6777 7877 468899999999999999
Q ss_pred Eehhhhccccccc----CCCCC-CCCccEEEecCCccCC--CCCceEEEEecCchhhccCCccchhhHHHHhhhcccCCC
Q 022463 166 ADMAHISGLVAAG----VIPSP-FEYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGL 238 (297)
Q Consensus 166 vD~a~~~g~~~~~----~~~~~-~~~~D~~~~s~~K~l~--gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 238 (297)
+|++|+....... +.... ..+.++++.|++|+++ |.+.|+++.+++ +.+.+...... .
T Consensus 205 ~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~--------------~~~~~~~~~~~-~ 269 (410)
T 3e2y_A 205 SDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPAH--------------LIKHLQTVQQN-S 269 (410)
T ss_dssp EECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECCHH--------------HHHHHHHHHHT-T
T ss_pred EEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEECHH--------------HHHHHHHHHHh-h
Confidence 9999875332211 11110 0134488889999874 233399988773 33333322111 1
Q ss_pred CCCCchHHHHHHHHHHHHH------hhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 239 QGGPHNHTITGLAVALKQV------CTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 239 ~~t~~~~~~~al~~al~~~------~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
..+.+.+...++.++++.. ... .+++++++.+++.+++.+.|++.
T Consensus 270 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 320 (410)
T 3e2y_A 270 FYTCATPLQAALAEAFWIDIKRMDDPEC-YFNSLPKELEVKRDRMVRLLNSV 320 (410)
T ss_dssp TCCCCHHHHHHHHHHHHHHHTTTTSTTS-HHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccCCChHHHHHHHHHHHhhhccccchHH-HHHHHHHHHHHHHHHHHHHHHHC
Confidence 3345666666767777641 122 56778888888999999988876
No 159
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.77 E-value=1.5e-17 Score=147.34 Aligned_cols=213 Identities=11% Similarity=0.072 Sum_probs=142.5
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChH-HHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeee
Q 022463 26 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 104 (297)
Q Consensus 26 ~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~-~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 104 (297)
+...+++ +.+++++++++++ +++++|++ ++..++.++ +||+|+++...|.+.... +...|.
T Consensus 51 ~~~~~lr----~~la~~~~~~~~~----i~~t~G~~~~l~~~~~~~--~gd~vl~~~p~~~~~~~~--------~~~~g~ 112 (337)
T 3p1t_A 51 DAEPRVM----RKLAEHFSCPEDN----LMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRAR--------IAVSGL 112 (337)
T ss_dssp THHHHHH----HHHHHHHTSCGGG----EEEESHHHHHHHHHHHHS--TTSEEEEESSSCSHHHHH--------HTTSCC
T ss_pred CchHHHH----HHHHHHhCcCHHH----EEEeCCHHHHHHHHHHhc--CCCeEEEeCCCcHHHHHH--------HHHcCC
Confidence 4556666 8889999998754 99999985 554455555 999999998777765432 222333
Q ss_pred eeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCCC
Q 022463 105 FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 182 (297)
Q Consensus 105 ~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~~ 182 (297)
.+ ++++.+ +++.+|++++++. . +++++++ +++| +|.+.|++++.++|+++++ +|+|++|+.- ........
T Consensus 113 ~~--~~v~~~-~~~~~d~~~l~~~--~-~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~-~ivDea~~~~-~~~~~~~~ 184 (337)
T 3p1t_A 113 RH--FEIGLT-DDLLLDPNDLAQV--S-RDDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVDY-SSFRARGL 184 (337)
T ss_dssp EE--EEECBC-TTSSBCHHHHTTC--C-TTEEEEEESSCTTTCCCCCHHHHHHHHHHCSE-EEEECTTGGG-SSCSSSCC
T ss_pred EE--EEecCC-CCCCCCHHHHHhh--c-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCc-EEEECCChhh-cccccccc
Confidence 34 344555 4678999999876 2 6788888 7878 8999999999999999997 6669998631 11111111
Q ss_pred CCCCccEEEecCCccCC--CCCceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHHHHHHHHhhh
Q 022463 183 PFEYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 260 (297)
Q Consensus 183 ~~~~~D~~~~s~~K~l~--gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~ 260 (297)
...+.++++.|++|+++ |.+.|+++.++ ++.+.+..... ..+++.+...++.++++..
T Consensus 185 ~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--------------~~~~~l~~~~~---~~~~~~~~~~a~~~~l~~~--- 244 (337)
T 3p1t_A 185 AYGENELVFRSFSKSYGLAGLRLGALFGPS--------------ELIAAMKRKQW---FCNVGTLDLHALEAALDND--- 244 (337)
T ss_dssp CCBTTEEEEEESSSTTCCTTTCCEEEECCH--------------HHHHHHHTTSC---TTCSCHHHHHHHHHHHTCH---
T ss_pred ccCCCEEEEeeCchhccCcchheEEEEeCH--------------HHHHHHHhhcC---CCCCCHHHHHHHHHHhCCH---
Confidence 11256799999999884 33449998877 34444443321 3455666666665555432
Q ss_pred cChhhHHHHhhhhHHHHHhhccCC
Q 022463 261 ITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 261 ~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
..+++..++..+.++++.+.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~l~~~L~~~ 268 (337)
T 3p1t_A 245 RAREAHIAKTLAQRRRVADALRGL 268 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC
Confidence 134556666667778888888765
No 160
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.76 E-value=1.2e-17 Score=151.46 Aligned_cols=176 Identities=14% Similarity=0.140 Sum_probs=125.0
Q ss_pred CCCchhHHHHHHHHHHHHHHHcCC--CCCCCcceEEecCCh-HHHHHHHHHhcCCC-CeEEEecCCCCCccccccccccc
Q 022463 22 YGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGS-PSNFQVYTALLKPH-DRIMALDLPHGGHLSHGYQTDTK 97 (297)
Q Consensus 22 ~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~~v~~~sG~-~~~~~~~~~~~~~g-d~Vl~~~~~~~~~~~~~~~~~~~ 97 (297)
|+......++++.+.+++.+.+|. +++ .|++++|+ .++..++.+++++| |+|+++...|++.....
T Consensus 72 y~~~~g~~~lr~~la~~l~~~~g~~~~~~----~i~~~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~~------ 141 (398)
T 3ele_A 72 YTSAQGDVETRAAIAEFLNNTHGTHFNAD----NLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFV------ 141 (398)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCCCCGG----GEEEESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHHH------
T ss_pred cCCCCCcHHHHHHHHHHHHHHhCCCCChH----HEEEccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHHH------
Confidence 444445578887777888888774 454 38888887 57777888889999 99999987777654322
Q ss_pred ccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCccc---HHHHHHHHHh------cCCEEEE
Q 022463 98 KISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYD---YERIRKVCNK------QKAIMLA 166 (297)
Q Consensus 98 ~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~---~~~i~~la~~------~g~~liv 166 (297)
...|..+ ++++.+++++.+|++++++.+++ ++++|++ +++| +|.+.| +++|.++|++ ||+++|+
T Consensus 142 --~~~g~~~--~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~ 216 (398)
T 3ele_A 142 --NAAGARL--VEVPADTEHFQIDFDALEERINA-HTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIA 216 (398)
T ss_dssp --HHTTCEE--EEECCCTTTSSCCHHHHHHTCCT-TEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEE
T ss_pred --HHcCCEE--EEEecCCcCCcCCHHHHHHHhCc-CCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEE
Confidence 2233334 34455545678999999999987 8999988 7777 898888 5677788998 9999999
Q ss_pred ehhhhcccccccCCCCC--CCCccEEEecCCccCC--CCCceEEEEecCc
Q 022463 167 DMAHISGLVAAGVIPSP--FEYADVVTTTTHKSLR--GPRGAMIFFRKGV 212 (297)
Q Consensus 167 D~a~~~g~~~~~~~~~~--~~~~D~~~~s~~K~l~--gp~gG~i~~~~~~ 212 (297)
|++|+.........+.. ..+.++++.|++|+++ |.+.|+++++++.
T Consensus 217 De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~ 266 (398)
T 3ele_A 217 DEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYVLVPDEV 266 (398)
T ss_dssp ECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTTTCCEEEECCTTS
T ss_pred eccccccccCCCCcCChHhhcCCeEEEEehhhcCCCccceeEEEEEcchh
Confidence 99987533221111110 1145688999999884 2334999988863
No 161
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.76 E-value=5.1e-18 Score=152.01 Aligned_cols=209 Identities=14% Similarity=0.061 Sum_probs=143.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeeeeE
Q 022463 29 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFE 107 (297)
Q Consensus 29 ~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 107 (297)
.+++ +.+++++|+++++ +++++|+ .++..++.+++++||+|+++..+|.+.... +...|..+.
T Consensus 68 ~~lr----~~la~~~g~~~~~----i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~--------~~~~g~~~~ 131 (360)
T 3hdo_A 68 QKLR----EVAGELYGFDPSW----IIMANGSDEVLNNLIRAFAAEGEEIGYVHPSYSYYGTL--------AEVQGARVR 131 (360)
T ss_dssp HHHH----HHHHHHHTCCGGG----EEEESSHHHHHHHHHHHHCCTTCEEEEESSSCTHHHHH--------HHHHTCEEE
T ss_pred HHHH----HHHHHHhCcCcce----EEEcCCHHHHHHHHHHHHhCCCCEEEEcCCChHHHHHH--------HHHCCCEEE
Confidence 5666 8888999987764 8888887 477778888999999999998877765432 222333343
Q ss_pred eeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCCCCC-
Q 022463 108 TMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF- 184 (297)
Q Consensus 108 ~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~~~~- 184 (297)
.+ +.+ +++.+ +++++ ..+++++++ +++| +|.+.|++++.++|+++|+++|+|++|+... .. ...++
T Consensus 132 ~v--~~~-~~~~~--~~l~~---~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~-~~--~~~~~~ 200 (360)
T 3hdo_A 132 TF--GLT-GDFRI--AGFPE---RYEGKVFFLTTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEFA-ES--NALELV 200 (360)
T ss_dssp EE--CBC-TTSSB--TTCCS---SBCSSEEEEESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGGS-SC--CCTHHH
T ss_pred Ee--eCC-CCCCH--HHHHh---hcCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhhC-Cc--chhHHh
Confidence 33 454 33433 33332 235778887 6777 8999999999999999999999999987421 10 01000
Q ss_pred --CCccEEEecCCccCC--CCCceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHHHHHHHHhhh
Q 022463 185 --EYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 260 (297)
Q Consensus 185 --~~~D~~~~s~~K~l~--gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~ 260 (297)
.+.++++.|++|+++ |.+.|+++.++ ++.+.+..... ..+++.+..+++.++|+. ..
T Consensus 201 ~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------------~~~~~~~~~~~---~~~~~~~~~~a~~~~l~~--~~ 261 (360)
T 3hdo_A 201 RRHENVVVTRTLSKSYSLAGMRIGLAIARP--------------EVIAALDKIRD---HYNLDRLAQAACVAALRD--QA 261 (360)
T ss_dssp HHCSSEEEEEESTTTTSCTTSCCEEEECCH--------------HHHHHHHHHSC---SCCSCHHHHHHHHHHHHC--HH
T ss_pred ccCCCEEEEecchHhhcCCccceeeEeeCH--------------HHHHHHHHhCC---CCCCCHHHHHHHHHHhcC--HH
Confidence 134588899999874 33349998866 34444444322 235666777777777764 22
Q ss_pred cChhhHHHHhhhhHHHHHhhccCC
Q 022463 261 ITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 261 ~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
.+++.+++.+++.+++.+.|++.
T Consensus 262 -~~~~~~~~~~~~~~~l~~~L~~~ 284 (360)
T 3hdo_A 262 -YLSECCRRIRETREWFTTELRSI 284 (360)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHC
Confidence 57888888899999999988876
No 162
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.76 E-value=2.1e-17 Score=154.71 Aligned_cols=238 Identities=12% Similarity=0.095 Sum_probs=151.2
Q ss_pred CccCCCchhHHHHHHHHHHHHHHHcC-C--CCCCCcceEEecCChH-HHHHHHHHhcCCCC----eEEEecCCCCCcccc
Q 022463 19 ARYYGGNEYIDMAESLCQKRALEAFR-L--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHD----RIMALDLPHGGHLSH 90 (297)
Q Consensus 19 ~~~~~~~~~~~~~e~~~~~~la~~~g-~--~~~~~~~~v~~~sG~~-~~~~~~~~~~~~gd----~Vl~~~~~~~~~~~~ 90 (297)
...|+......++++.+.+++++..| . ++++ |++|+|++ ++..++.+++++|| .|+++.+.|++....
T Consensus 122 ~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~----i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~~ 197 (498)
T 3ihj_A 122 LGSYSASQGVNCIREDVAAYITRRDGGVPADPDN----IYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAV 197 (498)
T ss_dssp ------CCSCHHHHHHHHHHHHHHTTTCCCCGGG----EEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCccc----EEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHHH
Confidence 34566667778889888888888774 4 4553 89999984 66667888888875 999999887766433
Q ss_pred cccccccccceeeeeeEeeecccCCC-CCcCCHHHHHHHhhhc----CCcEEEE-cCCC-CCCccc---HHHHHHHHHhc
Q 022463 91 GYQTDTKKISAVSIFFETMPYRLNES-TGYIDYDQLEKSATLF----RPKLIVA-GASA-YARLYD---YERIRKVCNKQ 160 (297)
Q Consensus 91 ~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~d~~~l~~~l~~~----~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~ 160 (297)
. ...|..+ ++++.+++ ++.+|+++|++.+++. ++++|++ +++| +|.+.+ +++|.++|++|
T Consensus 198 ~--------~~~g~~~--v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~ 267 (498)
T 3ihj_A 198 I--------SELDAIQ--VNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEE 267 (498)
T ss_dssp H--------HHTTCEE--EEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH
T ss_pred H--------HHcCCEE--EEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHc
Confidence 2 2233333 33344432 5689999999999874 4788888 7888 897766 55789999999
Q ss_pred CCEEEEehhhhcccccccCCCCCCC------------Ccc-EEEecCCccCC---CCCceEEEE---ecCchhhccCCcc
Q 022463 161 KAIMLADMAHISGLVAAGVIPSPFE------------YAD-VVTTTTHKSLR---GPRGAMIFF---RKGVKEINKQGKE 221 (297)
Q Consensus 161 g~~livD~a~~~g~~~~~~~~~~~~------------~~D-~~~~s~~K~l~---gp~gG~i~~---~~~~~~~~~~g~~ 221 (297)
|+++|+|+++.......+....++. ... +++.|++|.+. |-++|++++ ++
T Consensus 268 ~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~----------- 336 (498)
T 3ihj_A 268 KLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHP----------- 336 (498)
T ss_dssp TCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCH-----------
T ss_pred CcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCH-----------
Confidence 9999999998665443211111111 111 56789999984 566688874 33
Q ss_pred chhhHHHHhhhcccCCCCCCCchHHHHHHHHHHH----------HHhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 222 VFYDYEEKINQAVFPGLQGGPHNHTITGLAVALK----------QVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~----------~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
++.+.+...... ...++.+...++..+++ .+.+ ..++++++.++.++++.+.|++++.++
T Consensus 337 ---~l~~~l~~~~~~--~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~--~~~~~~~~l~~~~~~l~~~L~~~~g~~ 406 (498)
T 3ihj_A 337 ---EIKGQLVKLLSV--RLCPPVSGQAAMDIVVNPPVAGEESFEQFSR--EKESVLGNLAKKAKLTEDLFNQVPGIH 406 (498)
T ss_dssp ---HHHHHHHHHHHH--SCCCCHHHHHHHHHHTCCCCTTSTTHHHHHH--HHHHHHHHHHHHHHHHHHHHHTSTTEE
T ss_pred ---HHHHHHHHHHhc--cCCCCHHHHHHHHHHhcCCccCcccHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 333333322111 22345555555555542 1111 235566777788888888888876644
No 163
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.75 E-value=2.6e-17 Score=147.11 Aligned_cols=217 Identities=12% Similarity=0.046 Sum_probs=146.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChH-HHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeee
Q 022463 27 YIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 105 (297)
Q Consensus 27 ~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~-~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 105 (297)
...+++ +++++++++++++ +++++|++ ++..++.++ |+|+++..+|.+...... ..|..
T Consensus 62 ~~~~l~----~~la~~~~~~~~~----i~~~~g~t~al~~~~~~~----d~vi~~~~~~~~~~~~~~--------~~g~~ 121 (361)
T 3ftb_A 62 NYRRLN----KSIENYLKLKDIG----IVLGNGASEIIELSISLF----EKILIIVPSYAEYEINAK--------KHGVS 121 (361)
T ss_dssp TCHHHH----HHHHHHHTCCSCE----EEEESSHHHHHHHHHTTC----SEEEEEESCCTHHHHHHH--------HTTCE
T ss_pred cHHHHH----HHHHHHhCCCcce----EEEcCCHHHHHHHHHHHc----CcEEEecCChHHHHHHHH--------HcCCe
Confidence 345666 8889999988764 88888874 665455555 999999887776543222 22333
Q ss_pred eEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCEEEEehhhhccccc--cc
Q 022463 106 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVA--AG 178 (297)
Q Consensus 106 ~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~livD~a~~~g~~~--~~ 178 (297)
+..+ +.+ .++.++++++++.+++ ++++++ +++| +|.+.| +++|.++|++||+++|+|++|+..... ..
T Consensus 122 ~~~~--~~~-~~~~~~~~~l~~~l~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 196 (361)
T 3ftb_A 122 VVFS--YLD-ENMCIDYEDIISKIDD--VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSS 196 (361)
T ss_dssp EEEE--ECC-TTSCCCHHHHHHHTTT--CSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCCTTSS
T ss_pred EEEe--ecC-cccCCCHHHHHHhccC--CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCCcccc
Confidence 4334 455 3457888999999986 899888 7777 787776 557777888999999999998754442 11
Q ss_pred CCCCC-CCCccEEEecCCccCCCC--CceEEE-EecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHHHHH
Q 022463 179 VIPSP-FEYADVVTTTTHKSLRGP--RGAMIF-FRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVAL 254 (297)
Q Consensus 179 ~~~~~-~~~~D~~~~s~~K~l~gp--~gG~i~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al 254 (297)
..... ..+.++++.|++|+++.| +.|+++ .++ ++.+.+..... ..+++.+..+++.+++
T Consensus 197 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~--------------~~~~~~~~~~~---~~~~~~~~~~~~~~~l 259 (361)
T 3ftb_A 197 FVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNK--------------EIAAKIKAKQN---PWNINCFAEMAAINCL 259 (361)
T ss_dssp SGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCH--------------HHHHHHHTTSC---TTCSCHHHHHHHHHTS
T ss_pred hhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCH--------------HHHHHHHhhCC---CCCCCHHHHHHHHHHh
Confidence 00000 013347788999987422 238887 444 44444443322 2356677777777777
Q ss_pred HHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 255 KQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 255 ~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
+. .. .+++.+++.+++.+++.+.|++++.++
T Consensus 260 ~~--~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~ 290 (361)
T 3ftb_A 260 KD--TN-YIEESLLWIKKERKRFIEELNKIGFIK 290 (361)
T ss_dssp SC--HH-HHHHHHHHHHHHHHHHHHHHHHSSSEE
T ss_pred cC--HH-HHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 63 23 678889999999999999999887765
No 164
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.75 E-value=7.4e-18 Score=154.45 Aligned_cols=226 Identities=15% Similarity=0.026 Sum_probs=147.0
Q ss_pred chhHHHHHHHHHHHHHHHcC---CCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccc
Q 022463 25 NEYIDMAESLCQKRALEAFR---LDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKIS 100 (297)
Q Consensus 25 ~~~~~~~e~~~~~~la~~~g---~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~ 100 (297)
.....++++.+.+++.+.+| ++++ .+++++|+ .++..++.+++++||+|+++...|++..... .
T Consensus 84 ~~g~~~lr~~la~~l~~~~g~~~~~~~----~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~--------~ 151 (425)
T 1vp4_A 84 TEGDPVLKQQILKLLERMYGITGLDED----NLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAF--------R 151 (425)
T ss_dssp TTCCHHHHHHHHHHHHHHHCCCSCCGG----GEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHH--------H
T ss_pred CCCCHHHHHHHHHHHHhccCCCCCCcc----cEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHH--------H
Confidence 34457777655566655558 5554 38888887 4666688888999999999997776654322 2
Q ss_pred eeeeeeEeeecccCCCCCcCCHHHHHHHhhh-------cCCcEEE-E-cCCC-CCCccc---HHHHHHHHHhcCCEEEEe
Q 022463 101 AVSIFFETMPYRLNESTGYIDYDQLEKSATL-------FRPKLIV-A-GASA-YARLYD---YERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 101 ~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~-------~~~~~v~-~-~~~~-~G~~~~---~~~i~~la~~~g~~livD 167 (297)
..|..+..+ +.++ + .+|++.+++.+++ .++++|+ + +++| +|.+.| +++|.++|+++|+++|+|
T Consensus 152 ~~g~~~~~v--~~~~-~-~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~D 227 (425)
T 1vp4_A 152 QYLANFVVV--PLED-D-GMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVED 227 (425)
T ss_dssp TTTCEEEEE--EEET-T-EECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HcCCEEEEe--ccCC-C-CCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEE
Confidence 233334344 4442 3 3899999999975 3688875 5 5667 787776 568889999999999999
Q ss_pred hhhhcccccccCCCCCC-----CCccEEEecCCccCCCCC--ceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCC
Q 022463 168 MAHISGLVAAGVIPSPF-----EYADVVTTTTHKSLRGPR--GAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240 (297)
Q Consensus 168 ~a~~~g~~~~~~~~~~~-----~~~D~~~~s~~K~l~gp~--gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 240 (297)
++|+........ ..++ .+.++++.|++|+++ |. .|+++++++ +.+.+....... ..
T Consensus 228 e~~~~~~~~g~~-~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~--------------~~~~l~~~~~~~-~~ 290 (425)
T 1vp4_A 228 DPYGALRYEGET-VDPIFKIGGPERVVLLNTFSKVLA-PGLRIGMVAGSKE--------------FIRKIVQAKQSA-DL 290 (425)
T ss_dssp CSSTTCBCSSCC-CCCHHHHHCTTTEEEEEESTTTTC-GGGCEEEEECCHH--------------HHHHHHHHHHHH-HS
T ss_pred CCCccccCCCCC-CcCHHHhCCCCCEEEEeccccccc-cccceEEEeeCHH--------------HHHHHHHHhhhh-cC
Confidence 998764332110 0111 135688999999986 33 399998863 333332211111 12
Q ss_pred CCchHHHHHHHHHHHHHh-hhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 241 GPHNHTITGLAVALKQVC-TLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 241 t~~~~~~~al~~al~~~~-~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
+.+.+..+++.++|+... +. .+++++++.++..+++.+.|++.
T Consensus 291 ~~~~~~~~a~~~~l~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 334 (425)
T 1vp4_A 291 CSPAITHRLAARYLERYDLLE-QLKPTIELYRRKRTVMLNALEEY 334 (425)
T ss_dssp SCCHHHHHHHHHHHHHSCHHH-HTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhcCCHHH-HHHHHHHHHHHHHHHHHHHHHHh
Confidence 335566666667776531 22 46777777778888888888763
No 165
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.75 E-value=4.4e-17 Score=150.48 Aligned_cols=168 Identities=16% Similarity=0.138 Sum_probs=114.5
Q ss_pred cCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEecCCC-CCccccccccccccc
Q 022463 21 YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPH-GGHLSHGYQTDTKKI 99 (297)
Q Consensus 21 ~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~~~~-~~~~~~~~~~~~~~~ 99 (297)
.|...+...+++ +.++++++.+. .+++++|++++..++.+++++|| +++..+| ++.... +
T Consensus 70 ~y~~~~~~~~l~----~~la~~~~~~~-----~~~~~~gt~a~~~al~~l~~~gd--i~~~~~~~~~~~~~--------~ 130 (456)
T 2ez2_A 70 AYAGSENFYHLE----RTVQELFGFKH-----IVPTHQGRGAENLLSQLAIKPGQ--YVAGNMYFTTTRYH--------Q 130 (456)
T ss_dssp CSSSCHHHHHHH----HHHHHHHCCSE-----EEEESSHHHHHHHHHHHHCCTTC--EEEESSCCHHHHHH--------H
T ss_pred hcccChhHHHHH----HHHHHHhCCCc-----EEEeCCcHHHHHHHHHHhCCCCC--EeccccccchhHHH--------H
Confidence 455566677777 88889998763 25555666788778888899999 6677776 443222 2
Q ss_pred ceeeeeeEeeecccC----CC-----CCcCCHHHHHHHhhhcCC----cEEEE-cCCC--CCCccc---HHHHHHHHHhc
Q 022463 100 SAVSIFFETMPYRLN----ES-----TGYIDYDQLEKSATLFRP----KLIVA-GASA--YARLYD---YERIRKVCNKQ 160 (297)
Q Consensus 100 ~~~g~~~~~v~~~~~----~~-----~~~~d~~~l~~~l~~~~~----~~v~~-~~~~--~G~~~~---~~~i~~la~~~ 160 (297)
...|..+..+ +.+ ++ ++.+|+++|++++++ ++ ++|++ +++| +|.+.| +++|.++|++|
T Consensus 131 ~~~G~~~~~v--~~~~~~~~~~~~~~~~~~d~~~l~~~i~~-~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~ 207 (456)
T 2ez2_A 131 EKNGAVFVDI--VRDEAHDAGLNIAFKGDIDLKKLQKLIDE-KGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAH 207 (456)
T ss_dssp HHTTCEEEEC--BCGGGGCTTCCCSCTTCBCHHHHHHHHHH-HCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHT
T ss_pred HHcCCEEEEe--cccccccccccccccCCCCHHHHHHHHHh-ccccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHc
Confidence 2333333333 333 11 267899999999987 55 77777 5766 677776 89999999999
Q ss_pred CCEEEEehhhhcc---------cccccCCCC-----CCCCccEEEecCCccCCCCCceEEEEec
Q 022463 161 KAIMLADMAHISG---------LVAAGVIPS-----PFEYADVVTTTTHKSLRGPRGAMIFFRK 210 (297)
Q Consensus 161 g~~livD~a~~~g---------~~~~~~~~~-----~~~~~D~~~~s~~K~l~gp~gG~i~~~~ 210 (297)
|+++|+|++|+.| ....+.... .....|++++|++|+++.|.||+++.++
T Consensus 208 ~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~~~~~gG~~~~~~ 271 (456)
T 2ez2_A 208 GIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCLVNIGGFLCMND 271 (456)
T ss_dssp TCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTCCSSCEEEEESC
T ss_pred CCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEEeCcccCCCCceeEEEECC
Confidence 9999999999875 222221100 0024699988989986656579888843
No 166
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.75 E-value=7.9e-18 Score=152.92 Aligned_cols=232 Identities=9% Similarity=-0.012 Sum_probs=147.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcceEEe-cCCh-HHHHHHHHHhcCCC-CeEEEecCCCCCcccccccccccccceeeee
Q 022463 29 DMAESLCQKRALEAFRLDPEKWGVNVQS-LSGS-PSNFQVYTALLKPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIF 105 (297)
Q Consensus 29 ~~~e~~~~~~la~~~g~~~~~~~~~v~~-~sG~-~~~~~~~~~~~~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 105 (297)
.++.+++++++++++|++.++ .+++ ++|+ .++..++.+++++| +.| ...+|...... .....+ .|..
T Consensus 77 ~~~~~~~~~~la~~~g~~~~~---~i~~~t~g~t~al~~~~~~l~~~gv~~v--~~~~~~~~~~~--~~~~~~---~g~~ 146 (398)
T 2fyf_A 77 KNLVGRVRSGLAELFSLPDGY---EVILGNGGATAFWDAAAFGLIDKRSLHL--TYGEFSAKFAS--AVSKNP---FVGE 146 (398)
T ss_dssp HHHHHHHHHHHHHHTTCCTTC---EEEEEETCHHHHHHHHHHHTCSSCEEEE--ECSHHHHHHHH--HHHHCT---TSCC
T ss_pred HHHHHHHHHHHHHHhCCCCCc---eEEEeCCchhHHHHHHHHHhcCCCeEEE--eCCHHHHHHHH--HHHHhC---CCCc
Confidence 455667889999999997422 3777 7776 57777888888887 433 22222111000 000010 0222
Q ss_pred eEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhcccccccCCCCC
Q 022463 106 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 183 (297)
Q Consensus 106 ~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~~~~~~~~ 183 (297)
+..++ .+ ++...+. .+++ +|++|++ +++| +|.+.|+++|.++ +|+++|+|++|+.+..+.++
T Consensus 147 ~~~v~--~~-~g~~~~~-----~i~~-~~~~v~~~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~~~~---- 210 (398)
T 2fyf_A 147 PIIIT--SD-PGSAPEP-----QTDP-SVDVIAWAHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLPVDI---- 210 (398)
T ss_dssp CEEEE--CC-TTCCCCC-----CCCT-TCSEEEEESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSCCCG----
T ss_pred eEEEe--cC-CCCCCCc-----cccC-CCCEEEEeCcCCCcceecchHHhhhh---cCCeEEEEeccccCCcccCc----
Confidence 33444 33 2222332 1454 8999988 6666 8999999988887 89999999999988766443
Q ss_pred CCCccEEEecCCccCCCCCc-eEEEEecCchhhcc----CCcc--chhhHHHHhhhcccCCCCCCCchHHHHHHHHHHHH
Q 022463 184 FEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK----QGKE--VFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 256 (297)
Q Consensus 184 ~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~ 256 (297)
..+|++++|+||+++.+.| |+++++++...++. .++. ..................++++...++++.++++.
T Consensus 211 -~~~di~~~s~sK~~~~~gg~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~ 289 (398)
T 2fyf_A 211 -AETDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDW 289 (398)
T ss_dssp -GGCSEEEECTTSTTCSCSSEEEEEECHHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHH
T ss_pred -ccCcEEEEecCcccCCCCceEEEEECHHHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHH
Confidence 2479999999999877756 88888875421110 0000 00000000010000122467888888899999998
Q ss_pred HhhhcC-hhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 257 VCTLIT-FSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 257 ~~~~~g-~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
+.+. | ++++.++.+++++++.+.|++++.++
T Consensus 290 ~~~~-g~~~~~~~~~~~~~~~l~~~L~~~~g~~ 321 (398)
T 2fyf_A 290 LVGN-GGLDWAVKRTADSSQRLYSWAQERPYTT 321 (398)
T ss_dssp HHHH-TSHHHHHHHHHHHHHHHHHHHHHSTTEE
T ss_pred HHHc-cCHHHHHHHHHHHHHHHHHHHHHcCCce
Confidence 8877 6 99999999999999999999886544
No 167
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.75 E-value=3.6e-17 Score=149.87 Aligned_cols=174 Identities=14% Similarity=0.001 Sum_probs=119.4
Q ss_pred CCccCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChH-HH--HHHHHHhcC--C----------CCeEEEecC
Q 022463 18 GARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SN--FQVYTALLK--P----------HDRIMALDL 82 (297)
Q Consensus 18 ~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~-~~--~~~~~~~~~--~----------gd~Vl~~~~ 82 (297)
....|+......+++ +.+++++++++++ |++|+|++ ++ ..++.+++. | ||+|+++..
T Consensus 70 ~~~~Y~~~~g~~~lr----~~ia~~~~~~~~~----i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p 141 (427)
T 3ppl_A 70 DVRNYGGLDGIVDIR----QIWADLLGVPVEQ----VLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVP 141 (427)
T ss_dssp BTTSSCCSSCCHHHH----HHHHHHHTSCGGG----EEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEES
T ss_pred hhcCCCCCCCcHHHH----HHHHHHhCCCcce----EEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCC
Confidence 345666666778888 7888888998764 99999985 54 247777766 6 999999987
Q ss_pred CCCCcccccccccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE--cCCC-CCCcccHH---HHHHH
Q 022463 83 PHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA--GASA-YARLYDYE---RIRKV 156 (297)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~--~~~~-~G~~~~~~---~i~~l 156 (297)
.|.+..... ...|..+..+ +.+ .++ +|++.++++++..++++|++ +++| +|.+.|.+ +|.++
T Consensus 142 ~y~~~~~~~--------~~~g~~~~~v--~~~-~~g-~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~ 209 (427)
T 3ppl_A 142 GYDRHFSIT--------ERFGFEMISV--PMN-EDG-PDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAM 209 (427)
T ss_dssp CCHHHHHHH--------HHTTCEEEEE--EEE-TTE-ECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHC
T ss_pred CcHHHHHHH--------HHcCCEEEEe--CCC-CCC-CCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHH
Confidence 776654322 2334334344 445 233 99999999996447888887 3567 89888877 88888
Q ss_pred H-HhcCCEEEEehhhhcccccccC-CCCC---------CCCccEEEecCCccCCCCCc-eEEEEecC
Q 022463 157 C-NKQKAIMLADMAHISGLVAAGV-IPSP---------FEYADVVTTTTHKSLRGPRG-AMIFFRKG 211 (297)
Q Consensus 157 a-~~~g~~livD~a~~~g~~~~~~-~~~~---------~~~~D~~~~s~~K~l~gp~g-G~i~~~~~ 211 (297)
| ++||+++|+|++++........ ...+ ..+.++++.|++|++.++-+ |+++.+++
T Consensus 210 a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~~ 276 (427)
T 3ppl_A 210 ETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSAE 276 (427)
T ss_dssp CCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECCHH
T ss_pred HhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcCHH
Confidence 8 9999999999998753222111 0000 01457889999998433233 99888773
No 168
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.74 E-value=8.2e-18 Score=155.12 Aligned_cols=244 Identities=12% Similarity=0.059 Sum_probs=143.3
Q ss_pred CccCCCchhHHHHHHHHHHHHHHHc----CCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEecCCCCCcccccccc
Q 022463 19 ARYYGGNEYIDMAESLCQKRALEAF----RLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQT 94 (297)
Q Consensus 19 ~~~~~~~~~~~~~e~~~~~~la~~~----g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~ 94 (297)
...|+......+++ +.+++++ ++++++ |++++|++..+.++.+++++||+|+++...|+++.......
T Consensus 104 ~~~y~~~~g~~~lr----~~ia~~~~~g~~~~~~~----i~~t~G~~~al~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~ 175 (449)
T 3qgu_A 104 YSGYGAEQGQGALR----EAVASTFYGHAGRAADE----IFISDGSKCDIARIQMMFGSKPTVAVQDPSYPVYVDTSVMM 175 (449)
T ss_dssp CCCSTTTTCCHHHH----HHHHHHHHTTTTCCGGG----EEEESCHHHHHHHHHHHHCSSSCEEEEESCCTHHHHHHHHH
T ss_pred CCCCCCCCCcHHHH----HHHHHHHHcCCCCCHHH----EEEccCHHHHHHHHHHHhCCCCEEEEcCCCChhHHHHHHHc
Confidence 34455445567888 5555554 556553 99999996433344788999999999998887775433322
Q ss_pred cccccceeeeeeEeeecccCCC-CCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCEEEEeh
Q 022463 95 DTKKISAVSIFFETMPYRLNES-TGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYD---YERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 95 ~~~~~~~~g~~~~~v~~~~~~~-~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~livD~ 168 (297)
...+....+.....+.++.+.+ ....|++++ + ++++|++ +++| +|.+.+ +++|.++|++||+++|+|+
T Consensus 176 g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~De 249 (449)
T 3qgu_A 176 GMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-----K-RTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDA 249 (449)
T ss_dssp TCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC-----C-CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred CCcccccccccceeEEEecccccCCcCChhHc-----C-CCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEc
Confidence 1111000000011233344422 344454321 3 7899998 6777 887776 6788888999999999999
Q ss_pred hhhcccccc----cCCCCCC-CCccEEEecCCccCC--CCCceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCC
Q 022463 169 AHISGLVAA----GVIPSPF-EYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGG 241 (297)
Q Consensus 169 a~~~g~~~~----~~~~~~~-~~~D~~~~s~~K~l~--gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t 241 (297)
+|+...... .+..... .+.++++.|++|+++ |.+.|+++++++..... .. .+...+..... ...++
T Consensus 250 a~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~--~~----~~~~~~~~~~~-~~~~~ 322 (449)
T 3qgu_A 250 AYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKALKYAN--GE----PVHADWNRVMT-TCFNG 322 (449)
T ss_dssp TTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTTCBCTT--SC----BHHHHHHHHHH-HSCCC
T ss_pred chHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCHHHHhhh--hh----hHHHHHHHHhh-cccCC
Confidence 988643321 1111100 145788999999884 33449999887642100 00 01111111111 11234
Q ss_pred CchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 242 PHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 242 ~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
++.+...++.++++..... .+++++++.+++.+++.+.|++.
T Consensus 323 ~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 364 (449)
T 3qgu_A 323 ASNIVQAGGLACLQPEGLK-EMNAMIKFYKENAQILKTTFTEM 364 (449)
T ss_dssp CCHHHHHHHHHHTSHHHHH-HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHhhcCHH-HHHHHHHHHHHHHHHHHHHHHHC
Confidence 5556666666666543223 56778888888899999888876
No 169
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.74 E-value=3.8e-17 Score=149.82 Aligned_cols=237 Identities=12% Similarity=0.004 Sum_probs=149.0
Q ss_pred cCCCchhHHHHHHHHHHHHHHHc-CCCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccc
Q 022463 21 YYGGNEYIDMAESLCQKRALEAF-RLDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKK 98 (297)
Q Consensus 21 ~~~~~~~~~~~e~~~~~~la~~~-g~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~ 98 (297)
.|+......++++.+.+++.+.. +++++++ ..+++++|+ .++..++.+++++||+|+++...|++......
T Consensus 83 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~-~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~------ 155 (430)
T 2x5f_A 83 PYAPPQGIEELRDLWQQKMLRDNPELSIDNM-SRPIVTNALTHGLSLVGDLFVNQDDTILLPEHNWGNYKLVFN------ 155 (430)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHCTTCCGGGB-CCCEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHT------
T ss_pred ccCCCCCCHHHHHHHHHHHhccCcccCCCcc-ceEEEcCCchHHHHHHHHHHhCCCCEEEEcCCcCccHHHHHH------
Confidence 44444456778844444443332 6665420 017777776 57777888889999999999887777643222
Q ss_pred cce-eeeeeEeeecccCCCCCcCCHHHHHHHhhhc--CCcEEEE-cCCC-CCCccc---HHHHHHHHHh-----cCCEEE
Q 022463 99 ISA-VSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVA-GASA-YARLYD---YERIRKVCNK-----QKAIML 165 (297)
Q Consensus 99 ~~~-~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~--~~~~v~~-~~~~-~G~~~~---~~~i~~la~~-----~g~~li 165 (297)
. .|..+ ++++.+++++.+|++++++.+++. +++++++ +++| +|.+.| +++|.++|++ +|+++|
T Consensus 156 --~~~g~~~--~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li 231 (430)
T 2x5f_A 156 --TRNGANL--QTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAV 231 (430)
T ss_dssp --TTTCCEE--EEECCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred --HhcCCeE--EEEeccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEE
Confidence 2 23223 334454324679999999999863 6788887 6777 798888 7899999999 999999
Q ss_pred EehhhhcccccccCCCC---CC---CCc---cEEEecCCccCCCCC--ceEEEE---ecCchhhccCCccchhhHHHHhh
Q 022463 166 ADMAHISGLVAAGVIPS---PF---EYA---DVVTTTTHKSLRGPR--GAMIFF---RKGVKEINKQGKEVFYDYEEKIN 231 (297)
Q Consensus 166 vD~a~~~g~~~~~~~~~---~~---~~~---D~~~~s~~K~l~gp~--gG~i~~---~~~~~~~~~~g~~~~~~~~~~~~ 231 (297)
+|++++........... .+ .+. ++++.|++|+++.|. .|++++ +++ +.+.+.
T Consensus 232 ~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~--------------~~~~l~ 297 (430)
T 2x5f_A 232 VDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQT--------------TKEVLE 297 (430)
T ss_dssp EECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCHH--------------HHHHHH
T ss_pred EehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEEecCCHH--------------HHHHHH
Confidence 99998754322110000 00 134 677899999884332 399998 653 333332
Q ss_pred hcccC---CCCCCCchHHHHHHHHHHH-HHhhhcChhhHHHHhhhhHHHHHhhcc
Q 022463 232 QAVFP---GLQGGPHNHTITGLAVALK-QVCTLITFSHIHVFSLHVYPAFVSNQN 282 (297)
Q Consensus 232 ~~~~~---~~~~t~~~~~~~al~~al~-~~~~~~g~~~~~~~~~~l~~~l~~~l~ 282 (297)
..... ....+++.+..+++.++|+ ...-...+++++++.++..+++.+.|+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 352 (430)
T 2x5f_A 298 AKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVY 352 (430)
T ss_dssp HHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhhhhhcccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 21111 0133556677777777776 321111345578888888888888887
No 170
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.74 E-value=2.4e-17 Score=148.13 Aligned_cols=220 Identities=10% Similarity=0.044 Sum_probs=134.1
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHH---hc---CCC-CeEEEecCCCCCccccccccccc
Q 022463 26 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTA---LL---KPH-DRIMALDLPHGGHLSHGYQTDTK 97 (297)
Q Consensus 26 ~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~---~~---~~g-d~Vl~~~~~~~~~~~~~~~~~~~ 97 (297)
+...+++ +++++++|++ + .+++++|+ .++..++.+ +. +|| |+|+++..+|++...........
T Consensus 70 ~~~~~l~----~~la~~~g~~-~----~v~~~~g~t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~ 140 (375)
T 2eh6_A 70 PWQEELA----HKLVKHFWTE-G----KVFFANSGTESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQ 140 (375)
T ss_dssp HHHHHHH----HHHHHTSSSC-E----EEEEESSHHHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBC
T ss_pred HHHHHHH----HHHHhhcCCC-C----eEEEeCchHHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCC
Confidence 4445555 8899999983 3 37777776 566656543 35 788 99999988866553322211110
Q ss_pred ccceeeee---eEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCccc----HHHHHHHHHhcCCEEEEeh
Q 022463 98 KISAVSIF---FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYD----YERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 98 ~~~~~g~~---~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~----~~~i~~la~~~g~~livD~ 168 (297)
.....+.. .....++ ..|++++++++++ ++++|++ +++| +|.+.| +++|.++|++||+++|+|+
T Consensus 141 ~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~-~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De 213 (375)
T 2eh6_A 141 PKFHKGFEPLVPGFSYAK------LNDIDSVYKLLDE-ETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDE 213 (375)
T ss_dssp GGGTTTTCSCCSSEEEEC------TTCHHHHHTTCCT-TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred ccccCCCCCCCCCceeCC------CchHHHHHHHhcC-CeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEec
Confidence 00000000 0011111 1589999999986 8899998 4445 688877 9999999999999999999
Q ss_pred hhh-ccccccc--CCCCCCCCccEEEecCCccCCCCCc-eEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCch
Q 022463 169 AHI-SGLVAAG--VIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHN 244 (297)
Q Consensus 169 a~~-~g~~~~~--~~~~~~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~ 244 (297)
+|+ .+..+.. .... ...+|++++| |+++++.+ |+++++++ +.+.+.........+ .+.
T Consensus 214 ~~~~~~~~~~~~~~~~~-~~~~d~~s~S--K~~~~g~~~G~~~~~~~--------------~~~~~~~~~~~~~~~-~~~ 275 (375)
T 2eh6_A 214 VQTGIGRTGEFYAYQHF-NLKPDVIALA--KGLGGGVPIGAILAREE--------------VAQSFTPGSHGSTFG-GNP 275 (375)
T ss_dssp TTTTTTTTSSSSGGGGG-TCCCSEEEEC--GGGGTTSCCEEEEEEHH--------------HHTTCCTTSCCCSST-TCH
T ss_pred cccCCCCCCcchhhhhc-CCCCCEEEEc--ccccCCCCeEEEEEcHH--------------HHhhhcCCCCCCCCC-CCH
Confidence 998 4332211 1111 0037888766 99887666 99998873 232232211111122 244
Q ss_pred HHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCC
Q 022463 245 HTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSE 285 (297)
Q Consensus 245 ~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~ 285 (297)
...+++.++|+.+. +..++.+++.+++.+.|++++
T Consensus 276 ~~~~~~~~~l~~~~------~~~~~~~~~~~~l~~~L~~~~ 310 (375)
T 2eh6_A 276 LACRAGTVVVDEVE------KLLPHVREVGNYFKEKLKELG 310 (375)
T ss_dssp HHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHh
Confidence 45555556666543 466777778888888887765
No 171
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.74 E-value=5e-17 Score=147.07 Aligned_cols=221 Identities=10% Similarity=0.027 Sum_probs=140.4
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCC-hHHHHHHHHHhcCC----------CCeEEEecCCCCCcccccccc
Q 022463 26 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG-SPSNFQVYTALLKP----------HDRIMALDLPHGGHLSHGYQT 94 (297)
Q Consensus 26 ~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG-~~~~~~~~~~~~~~----------gd~Vl~~~~~~~~~~~~~~~~ 94 (297)
+...+++ +++++++|.+ + +++++| +.++..++..+..+ +|+|++...+|++........
T Consensus 78 ~~~~~l~----~~la~~~g~~--~----v~~~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 147 (392)
T 3ruy_A 78 DQLGPWY----EKVAKLTNKE--M----VLPMNTGAEAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSM 147 (392)
T ss_dssp TTHHHHH----HHHHHHHTCS--E----EEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHT
T ss_pred HHHHHHH----HHHHHhcCCC--E----EEEeCcHHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhc
Confidence 4455555 8899999833 2 555554 56777677766433 789999998886654322111
Q ss_pred ccc-ccc--eeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCccc----HHHHHHHHHhcCCEEE
Q 022463 95 DTK-KIS--AVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYD----YERIRKVCNKQKAIML 165 (297)
Q Consensus 95 ~~~-~~~--~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~----~~~i~~la~~~g~~li 165 (297)
... ... +.........++. .|++++++++++ ++++|++ +++| +|.+.| +++|.++|++||+++|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~------~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li 220 (392)
T 3ruy_A 148 SSNEEYKRGFGPMLPGIIVIPY------GDLEALKAAITP-NTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFV 220 (392)
T ss_dssp CSCTTTTTTCCSCCSSEEEECT------TCHHHHHHHCCT-TEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEE
T ss_pred cCChhhccccCCCCCCCeeeCc------ccHHHHHHHhcc-CeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 100 000 0000000111121 289999999986 8999999 6666 798888 9999999999999999
Q ss_pred Eehhhh-cccccccCCCCCCC-CccEEEecCCccCCC--CCceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCC
Q 022463 166 ADMAHI-SGLVAAGVIPSPFE-YADVVTTTTHKSLRG--PRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGG 241 (297)
Q Consensus 166 vD~a~~-~g~~~~~~~~~~~~-~~D~~~~s~~K~l~g--p~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t 241 (297)
+|++|+ .+............ ..|++++| |+|+| .++|+++++++ +.+.+.... .....+
T Consensus 221 ~De~~~~~~~~g~~~~~~~~~~~~d~~~~S--K~l~gG~~~~G~~~~~~~--------------~~~~~~~~~-~~~~~~ 283 (392)
T 3ruy_A 221 ADEIQTGLGRTGKVFACDWDNVTPDMYILG--KALGGGVFPISCAAANRD--------------ILGVFEPGS-HGSTFG 283 (392)
T ss_dssp EECTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTTSCCEEEEECHH--------------HHTTCCTTS-SCCSST
T ss_pred EeechhCCCccccchhhhccCCCCCEEEEc--hhhhCChhhhEEEEECHH--------------HHhhhccCC-cCCCCC
Confidence 999995 22111000000001 46888776 99887 56799998773 333332221 111335
Q ss_pred CchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 242 PHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 242 ~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
.+.+..+++.++++.+.. +++.++.+++.+++.+.|+++
T Consensus 284 ~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~l~~~L~~~ 322 (392)
T 3ruy_A 284 GNPLACAVSIAALEVLEE----EKLTERSLQLGEKLVGQLKEI 322 (392)
T ss_dssp TCHHHHHHHHHHHHHHHH----TTHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHh----hhHHHHHHHHHHHHHHHHHHh
Confidence 567788888888887643 567888888999999999887
No 172
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.58 E-value=2.4e-19 Score=162.60 Aligned_cols=232 Identities=13% Similarity=0.095 Sum_probs=150.6
Q ss_pred HHHHHHHHHHHHHHHcC--CCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeee
Q 022463 28 IDMAESLCQKRALEAFR--LDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 104 (297)
Q Consensus 28 ~~~~e~~~~~~la~~~g--~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 104 (297)
..++++.+.+++++.+| .++++ +++++|+ .++..++.+++++||+|+++...|++...... ..|.
T Consensus 68 ~~~l~~~la~~l~~~~g~~~~~~~----v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~--------~~g~ 135 (392)
T 3b1d_A 68 SDELLQAVLDWEKSEHQYSFDKED----IVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARSVR--------LNNR 135 (392)
Confidence 56777666677777777 44543 8888887 57766888888999999999877777654322 2232
Q ss_pred eeEeeecccCCC--CCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCEEEEehhhhcccccc
Q 022463 105 FFETMPYRLNES--TGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA 177 (297)
Q Consensus 105 ~~~~v~~~~~~~--~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~livD~a~~~g~~~~ 177 (297)
.+..+ +.+++ ++.+|++.+++.+++.++++|++ +++| +|.+.| +++|.++|++||+++|+|++|+......
T Consensus 136 ~~~~~--~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g 213 (392)
T 3b1d_A 136 KLVSN--SLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFG 213 (392)
Confidence 23333 44312 35689999999998437888888 6666 787665 8899999999999999999987643221
Q ss_pred ----cCCCCCC--CCccEEEecCCccCC--CCCceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHH
Q 022463 178 ----GVIPSPF--EYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITG 249 (297)
Q Consensus 178 ----~~~~~~~--~~~D~~~~s~~K~l~--gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a 249 (297)
.+..... .+.++++.|++|+++ |.+.|+++++++ ++.+.+.........++++.+..++
T Consensus 214 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~a 280 (392)
T 3b1d_A 214 HEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENP-------------TLCAQFKHQQLVNNHHEVSSLGYIA 280 (392)
Confidence 1111000 134578899999984 334488888653 2233332222111122345555556
Q ss_pred HHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccC-CCCcc
Q 022463 250 LAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNN-SENIE 288 (297)
Q Consensus 250 l~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~-~~~~~ 288 (297)
+.++|+.. +. .+++++++.+++.+++.+.|++ ++.++
T Consensus 281 ~~~~l~~~-~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 318 (392)
T 3b1d_A 281 TETAYRYG-KP-WLVALKAVLEENIQFAVEYFAQEAPRLK 318 (392)
Confidence 66666532 23 5677888888888888888887 66554
No 173
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.73 E-value=2.7e-17 Score=151.35 Aligned_cols=182 Identities=9% Similarity=0.009 Sum_probs=119.3
Q ss_pred cCCCchhHHHHHHHHHHHHHHHcCC--CCCCCcceEEecCChH-HHHHHHHHhcCCCC--------------eEEEe-cC
Q 022463 21 YYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHD--------------RIMAL-DL 82 (297)
Q Consensus 21 ~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~~v~~~sG~~-~~~~~~~~~~~~gd--------------~Vl~~-~~ 82 (297)
.|+......++++.+.+++.+.+|. ++++ |++|+|++ ++..++.+++++|| +|+++ ..
T Consensus 78 ~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~----i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p 153 (444)
T 3if2_A 78 NYSNPQGDSAFIDALVGFFNRHYDWNLTSEN----IALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTP 153 (444)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHHCCCCCGGG----EEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSS
T ss_pred ccCCCCCCHHHHHHHHHHHHhhcCCCCCHHH----EEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCC
Confidence 3555556788886666666666554 5554 88888884 77778888889998 78876 55
Q ss_pred CCCCcccccccccccccceeeeeeEeeecccCCC----CCcCCHHHHHHH---hhhcCCcEEEE-cCCC-CCCccc---H
Q 022463 83 PHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES----TGYIDYDQLEKS---ATLFRPKLIVA-GASA-YARLYD---Y 150 (297)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~----~~~~d~~~l~~~---l~~~~~~~v~~-~~~~-~G~~~~---~ 150 (297)
+|.++........ .+.+.....++++.+++ ++.+|++.|+++ +++ ++++|++ +++| +|.+.| +
T Consensus 154 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~-~~~~v~i~~p~nptG~~~~~~~l 228 (444)
T 3if2_A 154 EYIGYSDVHVEGQ----HFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEG-RIGAICCSRPTNPTGNVLTDEEM 228 (444)
T ss_dssp CCGGGTTCCSSSC----CEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTT-CEEEEEEESSCTTTCCCCCHHHH
T ss_pred Cccchhhcccccc----hhhccCceEEecccccccCccccCCCHHHHHHHHHhcCC-CceEEEeCCCCCCCCCcCCHHHH
Confidence 6666543221100 11122233444455532 247899999988 454 7888888 7878 898888 7
Q ss_pred HHHHHHHHhcCCEEEEehhhhcccccccCCCC--CCCCccEEEecCCccCCCCC-ceEEEEecC
Q 022463 151 ERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PFEYADVVTTTTHKSLRGPR-GAMIFFRKG 211 (297)
Q Consensus 151 ~~i~~la~~~g~~livD~a~~~g~~~~~~~~~--~~~~~D~~~~s~~K~l~gp~-gG~i~~~~~ 211 (297)
++|.++|++||+++|+|++|+........... ...+.+++++|++|++.... .|+++.+++
T Consensus 229 ~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~ 292 (444)
T 3if2_A 229 AHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAHLNWDNNTILCFSLSKIGLPGMRTGIIVADAK 292 (444)
T ss_dssp HHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESTTTTCGGGCCEEEECCHH
T ss_pred HHHHHHHHHCCCEEEEECCCCCcccccccccccccCCCCEEEEechhhccCCCCceEEEEECHH
Confidence 78899999999999999998743222111110 01256789999999632222 288887763
No 174
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.73 E-value=5.2e-17 Score=148.98 Aligned_cols=244 Identities=12% Similarity=0.064 Sum_probs=144.3
Q ss_pred cCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccc
Q 022463 21 YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKIS 100 (297)
Q Consensus 21 ~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~ 100 (297)
.|+......++++.+.+++.+.+++++++ |++++|++.++.++.+++++||.|+++...|+++..........+..
T Consensus 93 ~y~~~~g~~~l~~~ia~~~~~~~~~~~~~----i~~t~G~~~al~~l~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~ 168 (432)
T 3ei9_A 93 GYGAEQGAKPLRAAIAKTFYGGLGIGDDD----VFVSDGAKCDISRLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQF 168 (432)
T ss_dssp CCCCTTCCHHHHHHHHHHHHTTTTCCGGG----EEEESCHHHHHHHHHHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCE
T ss_pred CCCCCCCCHHHHHHHHHHHHccCCCCcce----EEECCChHHHHHHHHHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccc
Confidence 44444566788866656665555777654 99999996444466788999999999999888876543322211100
Q ss_pred ----eeeeeeEeeecccCC-CCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCEEEEehhh
Q 022463 101 ----AVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYD---YERIRKVCNKQKAIMLADMAH 170 (297)
Q Consensus 101 ----~~g~~~~~v~~~~~~-~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~livD~a~ 170 (297)
.....+..+ +.+. .+...|++. .+ ++++|++ +++| +|.+.+ +++|.++|++||+++|+|++|
T Consensus 169 ~~~~~~~~~~~~~--~~~~~~~~~~~l~~-----~~-~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~ 240 (432)
T 3ei9_A 169 NTDVQKYGNIEYM--RCTPENGFFPDLST-----VG-RTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAY 240 (432)
T ss_dssp ETTTTEETTCEEE--ECCGGGTTSCCGGG-----CC-CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTT
T ss_pred cccccccCceEEe--ccCcccCCcCChhh-----CC-CCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccch
Confidence 000012233 3332 223444432 23 7899888 7878 787775 556777799999999999999
Q ss_pred hccccccc---CCCCC-CCCccEEEecCCccCC--CCCceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCch
Q 022463 171 ISGLVAAG---VIPSP-FEYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHN 244 (297)
Q Consensus 171 ~~g~~~~~---~~~~~-~~~~D~~~~s~~K~l~--gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~ 244 (297)
+....... +...+ ..+.++++.|++|+++ |.+.|+++++++.... ... .+.+.+...... ..++++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~---~~~---~~~~~~~~~~~~-~~~~~~~ 313 (432)
T 3ei9_A 241 AMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYS---DGF---PVAKDFNRIICT-CFNGASN 313 (432)
T ss_dssp GGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCT---TSC---BHHHHHHHHHHH-SCCCSCH
T ss_pred HhhccCCCCCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChHHhhc---chH---HHHHHHHHHhcc-ccCCCCH
Confidence 85433211 11100 0145688999999873 3333999988854100 000 012222221111 1234555
Q ss_pred HHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 245 HTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 245 ~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
+...++.+++...... .++++.++.+++.+++.+.|++.
T Consensus 314 ~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 352 (432)
T 3ei9_A 314 ISQAGALACLTPEGLE-AMHKVIGFYKENTNIIIDTFTSL 352 (432)
T ss_dssp HHHHHHHHHSSHHHHH-HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcccHH-HHHHHHHHHHHHHHHHHHHHHHC
Confidence 6666655555422222 46777888888888888888776
No 175
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.72 E-value=2.1e-16 Score=144.52 Aligned_cols=172 Identities=17% Similarity=0.087 Sum_probs=118.2
Q ss_pred ccC-CCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChH-HHH--HHHHHhcC--C---------CCeEEEecCCC
Q 022463 20 RYY-GGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNF--QVYTALLK--P---------HDRIMALDLPH 84 (297)
Q Consensus 20 ~~~-~~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~-~~~--~~~~~~~~--~---------gd~Vl~~~~~~ 84 (297)
..| +......+++ +.+++++++++++ |++|+|++ ++. .++.+++. | ||+|+++...|
T Consensus 63 ~~Yp~~~~g~~~lr----~~ia~~~~~~~~~----i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y 134 (423)
T 3ez1_A 63 RNYPGGVAGLPSAR----ALFAGYLDVKAEN----VLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGY 134 (423)
T ss_dssp TSSCSCTTCCHHHH----HHHHHHTTSCGGG----EEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCC
T ss_pred hCCCCCCCChHHHH----HHHHHHhCCChhh----EEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCc
Confidence 445 5556677888 8888999998764 99999985 553 57788777 7 59999998777
Q ss_pred CCcccccccccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhh-hcCCcEEEE--cCCC-CCCcccHH---HHHHHH
Q 022463 85 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAT-LFRPKLIVA--GASA-YARLYDYE---RIRKVC 157 (297)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~-~~~~~~v~~--~~~~-~G~~~~~~---~i~~la 157 (297)
.+.... +...|..+..+ +.+. + .+|++.++++++ ..++++|++ +++| +|.+.|.+ +|.++|
T Consensus 135 ~~~~~~--------~~~~g~~~~~v--~~~~-~-g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a 202 (423)
T 3ez1_A 135 DRHFLL--------LQTLGFELLTV--DMQS-D-GPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQ 202 (423)
T ss_dssp HHHHHH--------HHHHTCEEEEE--EEET-T-EECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCC
T ss_pred HHHHHH--------HHHcCCEEEec--cCCC-C-CCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHH
Confidence 655432 22334334344 4442 3 499999999995 237888876 4677 89888877 788888
Q ss_pred -HhcCCEEEEehhhhcccccc-cCCC-CC---------CCCccEEEecCCccC-CCCCceEEEEecC
Q 022463 158 -NKQKAIMLADMAHISGLVAA-GVIP-SP---------FEYADVVTTTTHKSL-RGPRGAMIFFRKG 211 (297)
Q Consensus 158 -~~~g~~livD~a~~~g~~~~-~~~~-~~---------~~~~D~~~~s~~K~l-~gp~gG~i~~~~~ 211 (297)
++||+++|+|++++...... +... .+ ..+.++++.|++|++ .|.+.|+++.+++
T Consensus 203 ~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~ 269 (423)
T 3ez1_A 203 AAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAGAGLGFVASSED 269 (423)
T ss_dssp CSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECHH
T ss_pred HhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCCcceEEEEeCHH
Confidence 89999999999987432222 1110 00 014568899999964 3344499998873
No 176
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.72 E-value=6.5e-17 Score=146.51 Aligned_cols=220 Identities=12% Similarity=0.119 Sum_probs=136.6
Q ss_pred HHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhc--CCCCeEEEecCCCCCccccccc-ccccccc--eeeee
Q 022463 32 ESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALL--KPHDRIMALDLPHGGHLSHGYQ-TDTKKIS--AVSIF 105 (297)
Q Consensus 32 e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~--~~gd~Vl~~~~~~~~~~~~~~~-~~~~~~~--~~g~~ 105 (297)
.++.++++++++++++++ +++++|+ .++..+++++. .+||.|++++..+++....... .....+. ..-..
T Consensus 89 ~~~l~~~la~~~~~~~~~----v~~~~gg~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~ 164 (395)
T 1vef_A 89 RGEFYRTLTAILPPELNR----VFPVNSGTEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLV 164 (395)
T ss_dssp HHHHHHHHHHTSCTTEEE----EEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCS
T ss_pred HHHHHHHHHHhcCCCcCE----EEEcCcHHHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCC
Confidence 334449999999876553 7776666 57766776653 6789999888766554322111 1111000 00000
Q ss_pred eEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEEcC-CC-CCCccc----HHHHHHHHHhcCCEEEEehhhhcccccccC
Q 022463 106 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA-SA-YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV 179 (297)
Q Consensus 106 ~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~-~~-~G~~~~----~~~i~~la~~~g~~livD~a~~~g~~~~~~ 179 (297)
.....++ ..|++++++.+++ ++++|++++ +| +|...| +++|.++|++||+++|+|++|+ +....+.
T Consensus 165 ~~~~~~~------~~d~~~l~~~i~~-~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~-~~~~~g~ 236 (395)
T 1vef_A 165 EPVEFIP------YNDVEALKRAVDE-ETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQT-GMGRTGK 236 (395)
T ss_dssp SCEEEEC------TTCHHHHHHHCCT-TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSS
T ss_pred CCeeEeC------CCcHHHHHHHhcc-CEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccCCc
Confidence 0011111 2589999999986 888888843 33 788877 9999999999999999999998 4321111
Q ss_pred CCCC---CC-CccEEEecCCccCCCCCc-eEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHHHHH
Q 022463 180 IPSP---FE-YADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVAL 254 (297)
Q Consensus 180 ~~~~---~~-~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al 254 (297)
..+ .. .+|++ |++|+++++.+ |+++++++ +.+.+..... ....+++....+++.+++
T Consensus 237 -~~~~~~~~~~~d~~--s~sK~~~~g~~~G~~~~~~~--------------~~~~l~~~~~-~~~~~~~~~~~~a~~~al 298 (395)
T 1vef_A 237 -RFAFEHFGIVPDIL--TLAKALGGGVPLGVAVMREE--------------VARSMPKGGH-GTTFGGNPLAMAAGVAAI 298 (395)
T ss_dssp -SSTHHHHTCCCSEE--EECGGGGTTSSCEEEEEEHH--------------HHHTSCTTSS-CCSSTTCHHHHHHHHHHH
T ss_pred -hhHhhhcCCCCCEE--EEcccccCCCceEEEEehHH--------------HHhhhccCCc-CCCcCCCHHHHHHHHHHH
Confidence 111 01 47877 45799987655 99998874 3333322111 112345667777888888
Q ss_pred HHHhhhcChhhHHHHhhhhHHHHHhhccCCC
Q 022463 255 KQVCTLITFSHIHVFSLHVYPAFVSNQNNSE 285 (297)
Q Consensus 255 ~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~ 285 (297)
+.+.+ +.+.++.+++.+++.+.|+++.
T Consensus 299 ~~~~~----~~~~~~~~~~~~~l~~~l~~~~ 325 (395)
T 1vef_A 299 RYLER----TRLWERAAELGPWFMEKLRAIP 325 (395)
T ss_dssp HHHHH----HTTHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHh----CCHHHHHHHHHHHHHHHHHHhh
Confidence 87754 2356677778888888887764
No 177
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.71 E-value=4.3e-16 Score=144.22 Aligned_cols=170 Identities=15% Similarity=0.153 Sum_probs=110.8
Q ss_pred cCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCC-hHHHHHHHHHhcC----CCCe---EEEecCCCCCc-cccc
Q 022463 21 YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG-SPSNFQVYTALLK----PHDR---IMALDLPHGGH-LSHG 91 (297)
Q Consensus 21 ~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG-~~~~~~~~~~~~~----~gd~---Vl~~~~~~~~~-~~~~ 91 (297)
.|+..+...+++ ++++++++.+. +++++| +.++..++.+++. +||+ |+++ ..|... ....
T Consensus 71 ~y~~~~~~~~l~----~~la~~~~~~~------v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~viv~-~~~~~~~~~~~ 139 (467)
T 1ax4_A 71 AYAGSRNYYDLK----DKAKELFNYDY------IIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFIS-NFHFDTTAAHV 139 (467)
T ss_dssp CSSSCHHHHHHH----HHHHHHHCCCE------EEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEE-SSCCHHHHHHH
T ss_pred ccccCccHHHHH----HHHHHHcCCCc------EEEcCCcHHHHHHHHHHHHHhhccCCCccceEEEe-ccccchhhHHH
Confidence 455556677777 88888988742 666664 4688778888887 9998 8887 445222 1111
Q ss_pred ccccccccceeeeeeEeeecc--cCC-----CCCcCCHHHHHHHhhhc---CCcEEEE-cCCC-C-CCcc---cHHHHHH
Q 022463 92 YQTDTKKISAVSIFFETMPYR--LNE-----STGYIDYDQLEKSATLF---RPKLIVA-GASA-Y-ARLY---DYERIRK 155 (297)
Q Consensus 92 ~~~~~~~~~~~g~~~~~v~~~--~~~-----~~~~~d~~~l~~~l~~~---~~~~v~~-~~~~-~-G~~~---~~~~i~~ 155 (297)
...|..+..++.. ++. .++.+|+++|++++++. ++++|++ +++| + |.+. ++++|.+
T Consensus 140 --------~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~ 211 (467)
T 1ax4_A 140 --------ELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYE 211 (467)
T ss_dssp --------HHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHH
T ss_pred --------hccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHH
Confidence 1112222222111 111 24578999999999852 5888888 5666 5 6654 4679999
Q ss_pred HHHhcCCEEEEehhhhc-ccc--------cccCCCCCC-----CCccEEEecCCccCCCCCceEEEEe
Q 022463 156 VCNKQKAIMLADMAHIS-GLV--------AAGVIPSPF-----EYADVVTTTTHKSLRGPRGAMIFFR 209 (297)
Q Consensus 156 la~~~g~~livD~a~~~-g~~--------~~~~~~~~~-----~~~D~~~~s~~K~l~gp~gG~i~~~ 209 (297)
+|++||+++|+|++|+. +.. ..+.....+ ..+|++++|+||+++.|.||+++.+
T Consensus 212 la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~~~Gg~~~~~ 279 (467)
T 1ax4_A 212 IAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNIGGLVAIR 279 (467)
T ss_dssp HHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCSSCEEEEES
T ss_pred HHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccceEEEeccccCCCCcceEEEeC
Confidence 99999999999998776 221 111110000 1478999999999876667888877
No 178
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.70 E-value=1.3e-15 Score=139.59 Aligned_cols=221 Identities=11% Similarity=0.037 Sum_probs=136.6
Q ss_pred HHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhc---C----CCCeEEEecCCCCCcccccccc-c-----cccc-
Q 022463 35 CQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALL---K----PHDRIMALDLPHGGHLSHGYQT-D-----TKKI- 99 (297)
Q Consensus 35 ~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~---~----~gd~Vl~~~~~~~~~~~~~~~~-~-----~~~~- 99 (297)
.++++++++++++++ +++++|+ .++..+++++. + |||+|++.+..+++........ . ..+.
T Consensus 91 l~~~la~~~~~~~~~----v~~~~ggtea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~ 166 (429)
T 1s0a_A 91 LCRKLVAMTPQPLEC----VFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWK 166 (429)
T ss_dssp HHHHHHHHSCTTCCE----EEEESSHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGT
T ss_pred HHHHHHHhCCCCCCE----EEEeCCHHHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhccccc
Confidence 337899999877654 7777766 57766666542 2 6999999987655432211100 0 0000
Q ss_pred -ceeeeeeEeeecccC---CCCCcCCHHHHHHHhhh--cCCcEEEEcCC--C-CCCccc----HHHHHHHHHhcCCEEEE
Q 022463 100 -SAVSIFFETMPYRLN---ESTGYIDYDQLEKSATL--FRPKLIVAGAS--A-YARLYD----YERIRKVCNKQKAIMLA 166 (297)
Q Consensus 100 -~~~g~~~~~v~~~~~---~~~~~~d~~~l~~~l~~--~~~~~v~~~~~--~-~G~~~~----~~~i~~la~~~g~~liv 166 (297)
...+ +..++++.. ...+.+|++++++.+++ .++++|++++. | +|...| +++|.++|++||+++|+
T Consensus 167 ~~~~~--~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~ 244 (429)
T 1s0a_A 167 GYLPE--NLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIA 244 (429)
T ss_dssp TTSCC--CEEECCCCSBC-CCCCGGGGHHHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCC--ceEeCCCcccccccchHHHHHHHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 0111 233433321 01235899999999974 25667777654 4 787776 99999999999999999
Q ss_pred ehhhh-cccccc----cCCCCCCCCccEEEecCCccCCCC-Cc-eEEEEecCchhhccCCccchhhHHHHhhhcc---c-
Q 022463 167 DMAHI-SGLVAA----GVIPSPFEYADVVTTTTHKSLRGP-RG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAV---F- 235 (297)
Q Consensus 167 D~a~~-~g~~~~----~~~~~~~~~~D~~~~s~~K~l~gp-~g-G~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~- 235 (297)
|++|+ .|.... +.... ..|++++| |+|+++ .+ |+++++++ +.+.+.... +
T Consensus 245 De~~~~~g~~g~~~~~~~~~~---~~d~~t~s--K~l~~G~~~iG~~~~~~~--------------~~~~l~~~~~~~~~ 305 (429)
T 1s0a_A 245 DEIATGFGRTGKLFACEHAEI---APDILCLG--KALTGGTMTLSATLTTRE--------------VAETISNGEAGCFM 305 (429)
T ss_dssp ECTTTTTTTTSSSSGGGGGTC---CCSEEEEC--GGGGTSSSCCEEEEECHH--------------HHHHHHTSTTSSCS
T ss_pred eehhhCCcccchHHHhhhcCC---CCCEEEec--ccccCCCccceEEEeCHH--------------HHHHhhcCCCcccc
Confidence 99996 332211 11111 56887665 998875 45 99998873 333333210 0
Q ss_pred CCCCCCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 236 PGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 236 ~~~~~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
.....+.+.+..+++.++++.+.+. .+.++.+++.+++.+.|+++
T Consensus 306 ~~~t~~~n~~~~~a~~aal~~~~~~----~~~~~~~~~~~~l~~~L~~l 350 (429)
T 1s0a_A 306 HGPTFMGNPLACAAANASLAILESG----DWQQQVADIEVQLREQLAPA 350 (429)
T ss_dssp CCCTTTTCHHHHHHHHHHHHHHHTC----HHHHHHHHHHHHHHHHHGGG
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHhC----CHHHHHHHHHHHHHHHHHHH
Confidence 1112345677888888889877643 35566677777887777765
No 179
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.70 E-value=3e-16 Score=143.19 Aligned_cols=236 Identities=9% Similarity=0.044 Sum_probs=138.9
Q ss_pred cCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCccccccccccccc
Q 022463 21 YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKI 99 (297)
Q Consensus 21 ~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~ 99 (297)
.|+......++++.+.+++....+.+.. ..+++++|+ .++..++.++++|||+|+++...|.++... +
T Consensus 75 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~---~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~--------~ 143 (418)
T 3rq1_A 75 GYAPIAGIPDFLCAAEKECFGNFRPEGH---IRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYRVI--------C 143 (418)
T ss_dssp SCCCTTCCHHHHHHHHHHHHGGGCCSSE---EEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHHHH--------H
T ss_pred CCCCCCChHHHHHHHHHHHhcccCcccc---ccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHHHH--------H
Confidence 3444445678886666666555554421 138888887 477778888999999999998777665432 2
Q ss_pred ceeeeeeEeeecccCCCCCcCCHHHHHHHhhhc---CCc-EEEE-cC-CC-CCCcccHHHHH---HHHH------hcCCE
Q 022463 100 SAVSIFFETMPYRLNESTGYIDYDQLEKSATLF---RPK-LIVA-GA-SA-YARLYDYERIR---KVCN------KQKAI 163 (297)
Q Consensus 100 ~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~---~~~-~v~~-~~-~~-~G~~~~~~~i~---~la~------~~g~~ 163 (297)
...|..+ ++++.+++++.+|++.+++.+++. +++ ++++ ++ +| +|.+.|.+++. ++|+ +||++
T Consensus 144 ~~~g~~~--~~v~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~ 221 (418)
T 3rq1_A 144 SDTGRTL--VTYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVI 221 (418)
T ss_dssp HHTTCEE--EEECSBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEE
T ss_pred HHcCCEE--EEEeeeCCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeE
Confidence 2334334 344554345789999999999852 666 6666 57 67 89888876555 4555 89999
Q ss_pred EEEehhhhcccccc----cC-CCCCCCCcc---EEEecCCccCCCC--CceEEEE---ecCchhhccCCccchhhHHHHh
Q 022463 164 MLADMAHISGLVAA----GV-IPSPFEYAD---VVTTTTHKSLRGP--RGAMIFF---RKGVKEINKQGKEVFYDYEEKI 230 (297)
Q Consensus 164 livD~a~~~g~~~~----~~-~~~~~~~~D---~~~~s~~K~l~gp--~gG~i~~---~~~~~~~~~~g~~~~~~~~~~~ 230 (297)
+|+|+++....... .+ ...+-...| +++.|++|.++.| +.|++++ +++ +.+.+
T Consensus 222 li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~--------------~~~~~ 287 (418)
T 3rq1_A 222 IGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDEE--------------IADEF 287 (418)
T ss_dssp EEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSHH--------------HHHHH
T ss_pred EEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCHH--------------HHHHH
Confidence 99999974221110 00 000000123 6788999987433 3388887 443 33332
Q ss_pred hhcccC---CCCCCCchHHHHHHHHHHHHHh-----hhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 231 NQAVFP---GLQGGPHNHTITGLAVALKQVC-----TLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 231 ~~~~~~---~~~~t~~~~~~~al~~al~~~~-----~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
...... ...++++.....++..+++... .. ..++++++.++..+++.+.|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 348 (418)
T 3rq1_A 288 FEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEA-ERNCYYQLIRDRADIFKQEAAQV 348 (418)
T ss_dssp HHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhc
Confidence 221100 0012345555555555553211 01 23355666677777777777654
No 180
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.70 E-value=1.8e-16 Score=146.76 Aligned_cols=178 Identities=13% Similarity=0.140 Sum_probs=111.9
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhcCC-----C----CeEEEecCCCCCcccc
Q 022463 20 RYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKP-----H----DRIMALDLPHGGHLSH 90 (297)
Q Consensus 20 ~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~~~-----g----d~Vl~~~~~~~~~~~~ 90 (297)
..|+..+...+++ ++++++++.+. .+++++|+.++..++.+++++ | |+|++. ..|......
T Consensus 68 ~~y~~~~~~~~l~----~~la~~~~~~~-----v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d~Ii~~-~~h~~t~~~ 137 (467)
T 2oqx_A 68 EAYSGSRSYYALA----ESVKNIFGYQY-----TIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFS-NYFFDTTQG 137 (467)
T ss_dssp CCSSSCHHHHHHH----HHHHHHHCCSE-----EEEEC--CCSHHHHHHHHHHHHHHHHCCCTTTCEEEE-SSCCHHHHH
T ss_pred ceeccCchhHHHH----HHHHHHhCcCc-----EEEcCCcHHHHHHHHHHHhccccccCCCCccceEEec-ccccccchh
Confidence 3566667777787 88889998743 244445666777788888777 8 997765 455332111
Q ss_pred cccccccccc-eeeeeeEeeecccC---CCCCcCCHHHHHHHhhh---cCCcEEEE-cCCC-C-CCcc---cHHHHHHHH
Q 022463 91 GYQTDTKKIS-AVSIFFETMPYRLN---ESTGYIDYDQLEKSATL---FRPKLIVA-GASA-Y-ARLY---DYERIRKVC 157 (297)
Q Consensus 91 ~~~~~~~~~~-~~g~~~~~v~~~~~---~~~~~~d~~~l~~~l~~---~~~~~v~~-~~~~-~-G~~~---~~~~i~~la 157 (297)
.... .+.. +.+ +...+++.+ +.++.+|+++|++++++ .++++|++ +++| + |.+. ++++|.++|
T Consensus 138 ~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la 213 (467)
T 2oqx_A 138 HSQI--NGCTVRNV--YIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIA 213 (467)
T ss_dssp HHHH--TTCEEEEC--BCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHH
T ss_pred hhhc--cCcceeec--cccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHH
Confidence 1110 0111 111 001111111 13467899999999985 26899988 5666 4 6554 477999999
Q ss_pred HhcCCEEEEehhhhc-ccc--------cccCCCCCC-----CCccEEEecCCccCCCCCceEEEEecC
Q 022463 158 NKQKAIMLADMAHIS-GLV--------AAGVIPSPF-----EYADVVTTTTHKSLRGPRGAMIFFRKG 211 (297)
Q Consensus 158 ~~~g~~livD~a~~~-g~~--------~~~~~~~~~-----~~~D~~~~s~~K~l~gp~gG~i~~~~~ 211 (297)
++||+++|+|++|+. +.. ..+.....+ ..+|++++|+||+++.|.||+++.+++
T Consensus 214 ~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~g~~~Gg~~~~~~~ 281 (467)
T 2oqx_A 214 KKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMGGLLCMKDD 281 (467)
T ss_dssp HHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCSSCEEEEECSG
T ss_pred HHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCCeEEEecccccCCCCceEEEecCh
Confidence 999999999988876 332 111111001 247889999999997777888888764
No 181
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.70 E-value=1.9e-16 Score=144.34 Aligned_cols=235 Identities=10% Similarity=0.022 Sum_probs=140.0
Q ss_pred cCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhcCCCCeEEEecCCCCCccccccccccccc
Q 022463 21 YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKI 99 (297)
Q Consensus 21 ~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~ 99 (297)
.|+......++++.+.+++....+.+.. ..+++++|+ .++..++.+++++||+|+++.+.|.++... +
T Consensus 74 ~Y~~~~g~~~lr~~la~~~~~~~~~~~~---~~i~~t~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~~~~~--------~ 142 (413)
T 3t18_A 74 SYAPIEGEKDYRKIVIDTLFGPYKPEGY---ISAIATPGGTGAIRSAIFSYLDEGDPLICHDYYWAPYRKI--------C 142 (413)
T ss_dssp SCCCTTCCHHHHHHHHHHHHGGGCCSSE---EEEEEESHHHHHHHHHHHHHCCSSCEEEEESSCCTHHHHH--------H
T ss_pred CcCCCCCCHHHHHHHHHHHhcccCcccc---CcEEEcCccHHHHHHHHHHhcCCCCEEEECCCCcccHHHH--------H
Confidence 3444445677776666666555544321 138888887 477778888999999999998766665432 2
Q ss_pred ceeeeeeEeeecccCCCCCcCCHHHHHHHhhhc---CCc-EEEE-cC-CC-CCCcccHHHHHH---HHH------hcCCE
Q 022463 100 SAVSIFFETMPYRLNESTGYIDYDQLEKSATLF---RPK-LIVA-GA-SA-YARLYDYERIRK---VCN------KQKAI 163 (297)
Q Consensus 100 ~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~---~~~-~v~~-~~-~~-~G~~~~~~~i~~---la~------~~g~~ 163 (297)
...|..+..+ +.+++++.+|++++++.+++. +++ ++++ ++ +| +|.+.|.+++.+ +|+ +||++
T Consensus 143 ~~~g~~~~~~--~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~ 220 (413)
T 3t18_A 143 EEFGRNFKTF--EFFTDDFAFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKIT 220 (413)
T ss_dssp HHHTCEEEEE--CCBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEE
T ss_pred HHhCCeEEEe--eccCCCCCcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEE
Confidence 2334334334 453345789999999999753 677 5666 56 77 898888776554 555 89999
Q ss_pred EEEehhhhcccccccCCCCCC----C--Ccc---EEEecCCccCCCCC--ceEEEE---ecCchhhccCCccchhhHHHH
Q 022463 164 MLADMAHISGLVAAGVIPSPF----E--YAD---VVTTTTHKSLRGPR--GAMIFF---RKGVKEINKQGKEVFYDYEEK 229 (297)
Q Consensus 164 livD~a~~~g~~~~~~~~~~~----~--~~D---~~~~s~~K~l~gp~--gG~i~~---~~~~~~~~~~g~~~~~~~~~~ 229 (297)
+|+|+++..-. ..+....++ . ..| +++.|++|.++.|. .|++++ +++ +.+.
T Consensus 221 li~De~y~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~~~~--------------~~~~ 285 (413)
T 3t18_A 221 LIVDVAYLEFA-GDGDQQRKFFEKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVGISSSKE--------------IIEE 285 (413)
T ss_dssp EEEECTTGGGS-SSSSTTTGGGGGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEEESCHH--------------HHHH
T ss_pred EEEeccccccc-CChhhHHHHHHHHhhcCCCeeEEEEEecCccCCCcCcCcEEEEEecCCHH--------------HHHH
Confidence 99999974221 111110110 0 112 67789999875332 388887 553 3333
Q ss_pred hhhcccC---CCCCCCchHHHHHHHHHHHHHh----hhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 230 INQAVFP---GLQGGPHNHTITGLAVALKQVC----TLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 230 ~~~~~~~---~~~~t~~~~~~~al~~al~~~~----~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
+...... ...++++.....++..+++... .. ..++++++.++..+++.+.|++.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~ 346 (413)
T 3t18_A 286 FEASLAHSARCNWSNGTHAAQNILIELERAENKKIYEQ-ELVDLRNMLKSRADVFVTAAKEN 346 (413)
T ss_dssp HHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhhccccCCChHHHHHHHHHhcChHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHc
Confidence 3221100 0012345555555555553321 11 34456667777777777777765
No 182
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.69 E-value=1.9e-16 Score=144.20 Aligned_cols=179 Identities=13% Similarity=0.128 Sum_probs=112.7
Q ss_pred cCCCchhHHHHHHHHHHHHHHHcC--CCCCCCcceEEecCCh-HHHHHHHHHhcCCCC-----eEEEe-cCCCCCccccc
Q 022463 21 YYGGNEYIDMAESLCQKRALEAFR--LDPEKWGVNVQSLSGS-PSNFQVYTALLKPHD-----RIMAL-DLPHGGHLSHG 91 (297)
Q Consensus 21 ~~~~~~~~~~~e~~~~~~la~~~g--~~~~~~~~~v~~~sG~-~~~~~~~~~~~~~gd-----~Vl~~-~~~~~~~~~~~ 91 (297)
.|+......++++.+.+++.+.+| ++++ .|++|+|+ .++..++++++++|| +|+++ ..+|+++....
T Consensus 70 ~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~----~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~ 145 (417)
T 3g7q_A 70 NYDGPQGKTALLNALAVLLRETLGWDIEPQ----NIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSG 145 (417)
T ss_dssp STTCTTSHHHHHHHHHHHHHHHHCCCCCGG----GEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC--
T ss_pred ccCCCCCcHHHHHHHHHHHHHHhCCCCCcc----cEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhc
Confidence 455556678888666666666555 4554 48888888 477668888899987 89987 65655543322
Q ss_pred ccccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCEEEE
Q 022463 92 YQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYD---YERIRKVCNKQKAIMLA 166 (297)
Q Consensus 92 ~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~liv 166 (297)
.... ...+......+++.+..++.+|++.++ +++ ++++|++ +++| +|.+.| +++|.++|++||+++|+
T Consensus 146 ~~~~----~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~-~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~ 218 (417)
T 3g7q_A 146 LEDD----LFVSARPNIELLPEGQFKYHVDFEHLH--IGE-ETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVI 218 (417)
T ss_dssp ---C----CEEECCCEEEEEGGGEEEEECCGGGCC--CCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred cchh----hhccccCcccccCCcccccccCHHHhc--ccc-CceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 1110 111111223333332123568888888 555 7888888 7888 898888 78899999999999999
Q ss_pred ehhhhcccccccCCC-CC-CCCccEEEecCCccCCCCC--ceEEEEecC
Q 022463 167 DMAHISGLVAAGVIP-SP-FEYADVVTTTTHKSLRGPR--GAMIFFRKG 211 (297)
Q Consensus 167 D~a~~~g~~~~~~~~-~~-~~~~D~~~~s~~K~l~gp~--gG~i~~~~~ 211 (297)
|++|+.......... .+ ..+.++++.|++|+ .+|. .|+++.+++
T Consensus 219 De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~~~~ 266 (417)
T 3g7q_A 219 DNAYGVPFPGIIFSEARPLWNPNIILCMSLSKL-GLPGSRCGIIIANDK 266 (417)
T ss_dssp ECTTCTTTTCCBCSCCCCCCCTTEEEEEESGGG-TCTTSCCEEEECCHH
T ss_pred eCCCccccccccccccccCCCCCEEEEEechhc-cCCCcceEEEEeCHH
Confidence 999864321111111 01 12567889999995 3332 288888763
No 183
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.68 E-value=5.9e-16 Score=145.99 Aligned_cols=174 Identities=13% Similarity=0.106 Sum_probs=119.1
Q ss_pred CchhHHHHHHHHHHHHHHHcC----CCCCCCcceEEecCChH-HHHHHHHH-----hcCCCCeEEEecCCCCCccccccc
Q 022463 24 GNEYIDMAESLCQKRALEAFR----LDPEKWGVNVQSLSGSP-SNFQVYTA-----LLKPHDRIMALDLPHGGHLSHGYQ 93 (297)
Q Consensus 24 ~~~~~~~~e~~~~~~la~~~g----~~~~~~~~~v~~~sG~~-~~~~~~~~-----~~~~gd~Vl~~~~~~~~~~~~~~~ 93 (297)
......++++.+.+++.+.++ .++.+ .+++|+|++ ++..++.+ ++++||+|+++.++|.+......
T Consensus 136 ~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~---~i~~t~G~t~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~- 211 (533)
T 3f6t_A 136 PDRCLVNTEKIINYFLQELSYKDANLAEQT---DLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPE- 211 (533)
T ss_dssp SSSCCHHHHHHHHHHHHHHHTTTCCCGGGE---EEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEESSCCHHHHTSGG-
T ss_pred CcccHHHHHHHHHHHHHHhcCCCCCCCCcc---eEEEECCHHHHHHHHHHHhhhhhccCCcCEEEEcCCCcHHHHHHHH-
Confidence 445667888777777766622 22211 488888884 66557776 78999999999988877654322
Q ss_pred ccccccceeeeeeEeeecccC-CCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHH---HHHHHHH-hcCCEEEE
Q 022463 94 TDTKKISAVSIFFETMPYRLN-ESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYE---RIRKVCN-KQKAIMLA 166 (297)
Q Consensus 94 ~~~~~~~~~g~~~~~v~~~~~-~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~---~i~~la~-~~g~~liv 166 (297)
..|..+..++++.+ ..++.+|+++|++.+++ ++++|++ +++| +|.+.|.+ +|.++|+ +||+++|+
T Consensus 212 -------~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~-~~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~ 283 (533)
T 3f6t_A 212 -------LKDYELVEVDLHSYEKNDWEIEPNEIEKLKDP-SIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIIS 283 (533)
T ss_dssp -------GGGSEEEEECCCEETTTTSEECHHHHHHHSCT-TEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEE
T ss_pred -------HcCCeEEEEEecCCcccCCCCCHHHHHHHhCC-CCeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEE
Confidence 33333445544331 24678999999999987 8999988 7888 89888776 7778888 68999999
Q ss_pred ehhhhcccccccCCCC-C-CCCccEEEecCCccCCCC--CceEEEEecC
Q 022463 167 DMAHISGLVAAGVIPS-P-FEYADVVTTTTHKSLRGP--RGAMIFFRKG 211 (297)
Q Consensus 167 D~a~~~g~~~~~~~~~-~-~~~~D~~~~s~~K~l~gp--~gG~i~~~~~ 211 (297)
|++|+.... +.... . ..+.++++.|++|.++.| +.|+++++++
T Consensus 284 De~y~~~~~--~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~ 330 (533)
T 3f6t_A 284 DEVYGAFVP--NFKSIYSVVPYNTMLVYSYSKLFGCTGWRLGVIALNEK 330 (533)
T ss_dssp ECTTGGGST--TCCCHHHHSGGGEEEEEESHHHHTCGGGCEEEEEEESS
T ss_pred cCCcccccc--CccCHhhcCCCCEEEEecCcccCCCcccceEEEEECcH
Confidence 999873221 11100 0 013458999999987422 2399999876
No 184
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.68 E-value=4.9e-16 Score=141.16 Aligned_cols=227 Identities=10% Similarity=0.086 Sum_probs=133.5
Q ss_pred CCCchhHHHHHHHHHHHHHHH--cC-CCCCCCcceEEecCChH-HHHHHHHHhcCCCCeEEEecCCCCCccccccccccc
Q 022463 22 YGGNEYIDMAESLCQKRALEA--FR-LDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTK 97 (297)
Q Consensus 22 ~~~~~~~~~~e~~~~~~la~~--~g-~~~~~~~~~v~~~sG~~-~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~ 97 (297)
|+......+++ +.++++ +| +++++ |++++|++ ++. ++..++++||+|+++..+|++.....
T Consensus 71 y~~~~g~~~lr----~~la~~l~~g~~~~~~----v~~~~G~~~al~-~~~~~~~~gd~Vl~~~p~y~~~~~~~------ 135 (400)
T 3asa_A 71 YGPDFGLPALR----QKLSEDFYRGFVDAKE----IFISDGAKVDLF-RLLSFFGPNQTVAIQDPSYPAYLDIA------ 135 (400)
T ss_dssp CCCTTCCHHHH----HHHHHTTSTTSSCGGG----EEEESCHHHHHH-HHHHHHCSSCEEEEEESCCHHHHHHH------
T ss_pred CCCCCCCHHHH----HHHHHHHHcCCCCHHH----EEEccChHHHHH-HHHHHcCCCCEEEECCCCcHHHHHHH------
Confidence 43334557777 777777 47 56553 99999985 444 44556789999999987776654322
Q ss_pred ccceeeee-eEeeecccCCC-CCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCEEEEehhh
Q 022463 98 KISAVSIF-FETMPYRLNES-TGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYD---YERIRKVCNKQKAIMLADMAH 170 (297)
Q Consensus 98 ~~~~~g~~-~~~v~~~~~~~-~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~livD~a~ 170 (297)
...|.. +..++ .+++ ....|+++ + + ++++|++ +++| +|.+.| +++|.++|+++|+++|+|++|
T Consensus 136 --~~~g~~~~~~~~--~~~~~~~~~~l~~----~-~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~ 205 (400)
T 3asa_A 136 --RLTGAKEIIALP--CLQENAFFPEFPE----D-T-HIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAY 205 (400)
T ss_dssp --HHTTCSEEEEEE--CCGGGTTCCCCCT----T-C-CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred --HHcCCcceEecc--cchhcCcccChhh----c-c-CccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchh
Confidence 122322 33343 3311 22334322 1 3 7899988 6777 788877 557888999999999999998
Q ss_pred hcccc----cccCCCCCC-CCccEEEecCCccCC--CCCceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCc
Q 022463 171 ISGLV----AAGVIPSPF-EYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPH 243 (297)
Q Consensus 171 ~~g~~----~~~~~~~~~-~~~D~~~~s~~K~l~--gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~ 243 (297)
+.... +..+..... .+.++++.|++|+++ |.+.|+++++++..... +. . .+.+.........++++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~~~--~~----~-~~~~~~~~~~~~~~~~~ 278 (400)
T 3asa_A 206 STFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYAD--GH----F-VIQDWERFLSTTFNGAS 278 (400)
T ss_dssp GGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBCTT--SC----B-HHHHHHHHHHHHCCCCC
T ss_pred hhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhccch--hh----h-HHHHHHHHhccCccCCC
Confidence 73211 111111100 023488999999874 23349999887541000 00 0 11111000000022455
Q ss_pred hHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 244 NHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 244 ~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
.+...++.++|+.. .+++++++.+++.+++.+.|++.
T Consensus 279 ~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~l~~~L~~~ 315 (400)
T 3asa_A 279 IPAQEAGVAGLSIL----PQLEAIHYYRENSDLLRKALLAT 315 (400)
T ss_dssp HHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHhCcH----HHHHHHHHHHHHHHHHHHHHHHC
Confidence 56666665655432 46778888888888888888765
No 185
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.67 E-value=3.7e-16 Score=138.57 Aligned_cols=204 Identities=12% Similarity=0.047 Sum_probs=138.3
Q ss_pred HHHHHHHHHHHHHHHcC---CCCCCCcceEEecCChH-HHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceee
Q 022463 28 IDMAESLCQKRALEAFR---LDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS 103 (297)
Q Consensus 28 ~~~~e~~~~~~la~~~g---~~~~~~~~~v~~~sG~~-~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 103 (297)
..+++ +.++++++ +++++ +++++|++ ++..+++++ ||+|+++ .+|++.... +...|
T Consensus 58 ~~~lr----~~la~~~~~~~~~~~~----v~~~~G~~~al~~~~~~~---gd~Vl~~-p~y~~~~~~--------~~~~g 117 (335)
T 1uu1_A 58 DEELI----EKILSYLDTDFLSKNN----VSVGNGADEIIYVMMLMF---DRSVFFP-PTYSCYRIF--------AKAVG 117 (335)
T ss_dssp CHHHH----HHHHHHHTCSSCCGGG----EEEESSHHHHHHHHHHHS---SEEEECS-SSCHHHHHH--------HHHHT
T ss_pred hHHHH----HHHHHHcCCCCCCHHH----EEEcCChHHHHHHHHHHh---CCcEEEC-CCcHHHHHH--------HHHcC
Confidence 56666 88888888 77654 89989884 555566665 8999988 777665432 12223
Q ss_pred eeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhccccc--ccC
Q 022463 104 IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVA--AGV 179 (297)
Q Consensus 104 ~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~~~--~~~ 179 (297)
..+ ++++.+ +++.+|++++ + ++++|++ +++| +|.+.|.+++.++++..| ++|+|++|+..... ...
T Consensus 118 ~~~--~~v~~~-~~~~~d~~~l-----~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~~~~~~~~~~~ 187 (335)
T 1uu1_A 118 AKF--LEVPLT-KDLRIPEVNV-----G-EGDVVFIPNPNNPTGHVFEREEIERILKTGA-FVALDEAYYEFHGESYVDF 187 (335)
T ss_dssp CEE--EECCCC-TTSCCCCCCC-----C-TTEEEEEESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTHHHHCCCCGGG
T ss_pred CeE--EEeccC-CCCCCCHHHc-----C-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcchhhcchhHHHH
Confidence 333 334454 4467787776 3 7899987 7877 899999999999999989 99999998742211 111
Q ss_pred -CCCCCCCccEEEecCCccCCCC--CceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHHHHHHH
Q 022463 180 -IPSPFEYADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 256 (297)
Q Consensus 180 -~~~~~~~~D~~~~s~~K~l~gp--~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~ 256 (297)
... +.++++.|++|+++.| +.|++++++ ++.+.+.....+ .+++.+..+++.++|+.
T Consensus 188 ~~~~---~~~i~~~s~sK~~g~~G~r~G~~~~~~--------------~~~~~l~~~~~~---~~~~~~~~~~~~~~l~~ 247 (335)
T 1uu1_A 188 LKKY---ENLAVIRTFSKAFSLAAQRVGYVVASE--------------KFIDAYNRVRLP---FNVSYVSQMFAKVALDH 247 (335)
T ss_dssp GGTC---SSEEEEEESTTTTTCGGGCCEEEEECH--------------HHHHHHHHHSCT---TCSCHHHHHHHHHHHHT
T ss_pred hhhC---CCEEEEecchhhcCCcccCeEEEEeCH--------------HHHHHHHHhcCC---CCcCHHHHHHHHHHhCC
Confidence 111 4578999999987422 239999876 344444433222 35666777777777765
Q ss_pred HhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 257 VCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 257 ~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
. . .+++.+++.+++.+++.+.|++.
T Consensus 248 ~--~-~~~~~~~~~~~~~~~l~~~L~~~ 272 (335)
T 1uu1_A 248 R--E-IFEERTKFIVEERERMKSALREM 272 (335)
T ss_dssp H--H-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred H--H-HHHHHHHHHHHHHHHHHHHHHHC
Confidence 2 2 56777888888888888888765
No 186
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.67 E-value=3e-15 Score=138.18 Aligned_cols=239 Identities=9% Similarity=0.013 Sum_probs=138.6
Q ss_pred CccCCCchhHHHHHHHHHHHHHHHc-CCC-----CCCCcceEEe--cCCh-HHHHH--HHHHhcCCCCeEEEecCCCCCc
Q 022463 19 ARYYGGNEYIDMAESLCQKRALEAF-RLD-----PEKWGVNVQS--LSGS-PSNFQ--VYTALLKPHDRIMALDLPHGGH 87 (297)
Q Consensus 19 ~~~~~~~~~~~~~e~~~~~~la~~~-g~~-----~~~~~~~v~~--~sG~-~~~~~--~~~~~~~~gd~Vl~~~~~~~~~ 87 (297)
...|.......+++ +.+++++ |.+ +++ |++ |+|+ .++.. .+.+++.+||+|+++..+|.++
T Consensus 87 ~~~Y~~~~G~~~lr----~~ia~~l~g~~~~~~~~~~----i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~ 158 (448)
T 3meb_A 87 NKEYPPVAGFPLFL----EAAQFLMFGKDSKAAQEGR----IASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNH 158 (448)
T ss_dssp CCSCCCTTCCHHHH----HHHHHHHHCTTCHHHHTTC----EEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHH
T ss_pred CCCCCCCcchHHHH----HHHHHHhcCCCccccCcCc----EEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhH
Confidence 34454445567777 5555554 776 444 777 7776 45543 4566788999999999887776
Q ss_pred ccccccccccccceeeeeeEeeeccc-CCC-CCcCCHHHHHHHhhhc--CCcEEEE-cCCC-CCCcccH---HHHHHHHH
Q 022463 88 LSHGYQTDTKKISAVSIFFETMPYRL-NES-TGYIDYDQLEKSATLF--RPKLIVA-GASA-YARLYDY---ERIRKVCN 158 (297)
Q Consensus 88 ~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~-~~~~d~~~l~~~l~~~--~~~~v~~-~~~~-~G~~~~~---~~i~~la~ 158 (297)
....... ....|..+..+ +. +++ ++.+|++.+++.+++. +++++++ +++| +|...+. ++|.++|+
T Consensus 159 ~~~~~~~----~~~~G~~v~~~--~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~ 232 (448)
T 3meb_A 159 YGIYDKV----FNKLKVPYKEY--TYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMK 232 (448)
T ss_dssp HHHHHHH----HCTTTSCCEEE--CCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHH
T ss_pred HHHHHhh----HHhCCCeEEEE--eccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHH
Confidence 4432200 00223223334 44 434 5889999999999852 4566666 6777 8877764 56999999
Q ss_pred hcCCEEEEehhhhccccc-ccCCCCCC-----CC-ccEEEecCCccCCCCCc---eEE--EE--------ecC-chhhcc
Q 022463 159 KQKAIMLADMAHISGLVA-AGVIPSPF-----EY-ADVVTTTTHKSLRGPRG---AMI--FF--------RKG-VKEINK 217 (297)
Q Consensus 159 ~~g~~livD~a~~~g~~~-~~~~~~~~-----~~-~D~~~~s~~K~l~gp~g---G~i--~~--------~~~-~~~~~~ 217 (297)
+||+++|+|+++...... .+....++ .+ -.+++.|++|.++ +.| |++ ++ .++ ...
T Consensus 233 ~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g-~~G~RiG~l~~v~~~~~~~~~~~~~~~~--- 308 (448)
T 3meb_A 233 EKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFG-LYGERIGCLHVVHAGVEGSVEKNKALSA--- 308 (448)
T ss_dssp HHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSC-CGGGCCEEEEEECCCCSSSHHHHHHHHH---
T ss_pred HCCCEEEEecccccccCCCcccCchhHHHHhhcCCcEEEEecccccCC-CccccceeeeeeeccccccccCCHHHHH---
Confidence 999999999996532211 00000000 02 2366899999874 334 776 55 221 000
Q ss_pred CCccchhhHHHHhhhcccCCCCCCCchHHHHHHHHHHHHHh-----hhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 218 QGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVC-----TLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 218 ~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~-----~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
.+.+.+...... ..++++.+...++.++|+.-. .. .+++.+++.+++.+++.+.|+++
T Consensus 309 -------~l~~~l~~~~~~-~~~~~~~~~~~a~~~~l~~~~l~~~~~~-~~~~~~~~~~~~r~~l~~~L~~~ 371 (448)
T 3meb_A 309 -------AMVSGMTLQIRK-TWSMSAIHGAYIVQVIVHDKRLLQMFYD-NVKEMSARIHRMRSLLHASLAKR 371 (448)
T ss_dssp -------HHHHHHHHHHHT-TTSSCCHHHHHHHHHHHTSHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -------HHHHHHHHHHhc-ccCCccHHHHHHHHHHhcChHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhh
Confidence 122222221111 123445555555545443210 02 35777788888888888888765
No 187
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.66 E-value=8.5e-16 Score=139.97 Aligned_cols=236 Identities=13% Similarity=0.046 Sum_probs=141.9
Q ss_pred CCCchhHHHHHHHHHHHHHHHcC--CCCCCCcceEEe--cCCh-HHHHHH--HHHhcCCCCeEEEecCCCCCcccccccc
Q 022463 22 YGGNEYIDMAESLCQKRALEAFR--LDPEKWGVNVQS--LSGS-PSNFQV--YTALLKPHDRIMALDLPHGGHLSHGYQT 94 (297)
Q Consensus 22 ~~~~~~~~~~e~~~~~~la~~~g--~~~~~~~~~v~~--~sG~-~~~~~~--~~~~~~~gd~Vl~~~~~~~~~~~~~~~~ 94 (297)
|+......++++.+.+++.+..| +++++ |++ ++|+ .++..+ +...+.+||+|+++.++|++......
T Consensus 69 y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~----i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~-- 142 (412)
T 1yaa_A 69 YLGITGLPSLTSNAAKIIFGTQSDALQEDR----VISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFE-- 142 (412)
T ss_dssp CCCTTCCHHHHHHHHHHHHCTTCHHHHTTC----EEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHH--
T ss_pred CCCCCCcHHHHHHHHHHHhcCCCCCCCcce----EEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHH--
Confidence 44445567788555454443333 23444 777 7776 455544 34456799999999988777643222
Q ss_pred cccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcC--CcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCEEEEe
Q 022463 95 DTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFR--PKLIVA-GASA-YARLYD---YERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 95 ~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~--~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~livD 167 (297)
..|..+..++.. +++++.+|++++++.+++.+ +.++++ +++| +|.+.+ +++|.++|++||+++|+|
T Consensus 143 ------~~g~~~~~v~~~-~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~D 215 (412)
T 1yaa_A 143 ------NQGLKTATYPYW-ANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFD 215 (412)
T ss_dssp ------TTTCCEEEEECE-ETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred ------HcCceEEEEeee-cCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEe
Confidence 223334344321 33467899999999998632 334443 6777 787765 557889999999999999
Q ss_pred hhhhcccc--------cc-cCCCCCCCC---ccEEEecCCccCCCCCc---eEEE--E-----ecCchhhccCCccchhh
Q 022463 168 MAHISGLV--------AA-GVIPSPFEY---ADVVTTTTHKSLRGPRG---AMIF--F-----RKGVKEINKQGKEVFYD 225 (297)
Q Consensus 168 ~a~~~g~~--------~~-~~~~~~~~~---~D~~~~s~~K~l~gp~g---G~i~--~-----~~~~~~~~~~g~~~~~~ 225 (297)
++|..... +. .+... .. -++++.|++|.+ ||.| |+++ . +++... .
T Consensus 216 e~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~s~sK~~-~~~GlriG~~~~~~~~~~~~~~~~~----------~ 282 (412)
T 1yaa_A 216 TAYQGFATGDLDKDAYAVRLGVEK--LSTVSPVFVCQSFAKNA-GMYGERVGCFHLALTKQAQNKTIKP----------A 282 (412)
T ss_dssp ESCTTTSSSCHHHHTHHHHHHHHH--TTTTCCEEEEEECTTTS-CCGGGCEEEEEEECCSCTTHHHHHH----------H
T ss_pred cccccccCCcccchhHHHHHHHhc--CCCCcceEEEeccCCCC-CCcCCcceEEEEEecCCCCCHHHHH----------H
Confidence 99853211 11 11111 01 357789999987 4545 8887 5 331000 0
Q ss_pred HHHHhhhcccCCCCCCCchHHHHHHHHHHHHHh-----hhcChhhHHHHhhhhHHHHHhhccCCC
Q 022463 226 YEEKINQAVFPGLQGGPHNHTITGLAVALKQVC-----TLITFSHIHVFSLHVYPAFVSNQNNSE 285 (297)
Q Consensus 226 ~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~-----~~~g~~~~~~~~~~l~~~l~~~l~~~~ 285 (297)
+.+.+...... ..++++.+...++.++|+... +. .+++++++.+++.+++.+.|+++.
T Consensus 283 l~~~l~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~ 345 (412)
T 1yaa_A 283 VTSQLAKIIRS-EVSNPPAYGAKIVAKLLETPELTEQWHK-DMVTMSSRITKMRHALRDHLVKLG 345 (412)
T ss_dssp HHHHHHHHHHT-TTSSCCHHHHHHHHHHHHSHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhh-ccCCCChHHHHHHHHHhCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhC
Confidence 33333331111 123445666666666776542 23 577888888888999988887754
No 188
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.66 E-value=2e-15 Score=137.89 Aligned_cols=228 Identities=12% Similarity=-0.007 Sum_probs=133.8
Q ss_pred chhHHHHHHHHHHHHHHHcCCCC-CCCcceEEecCCh-HHHHHHHH---HhcCCCCeEEEecCCCCCccccc-ccccc--
Q 022463 25 NEYIDMAESLCQKRALEAFRLDP-EKWGVNVQSLSGS-PSNFQVYT---ALLKPHDRIMALDLPHGGHLSHG-YQTDT-- 96 (297)
Q Consensus 25 ~~~~~~~e~~~~~~la~~~g~~~-~~~~~~v~~~sG~-~~~~~~~~---~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~-- 96 (297)
.+...+++ +.++++++.+. + .+++++|+ .++..++. ++.++| .|++.+..+++..... .....
T Consensus 83 ~~~~~~l~----~~la~~~~~~~~~----~v~~~~g~~~a~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~ 153 (426)
T 1sff_A 83 YEPYLELC----EIMNQKVPGDFAK----KTLLVTTGSEAVENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVN 153 (426)
T ss_dssp CHHHHHHH----HHHHHHSSCSSCE----EEEEESSHHHHHHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCT
T ss_pred CHHHHHHH----HHHHHhCCccccc----EEEEeCchHHHHHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCcc
Confidence 34555566 88899983232 3 37777777 57766666 567777 7888877665543211 11110
Q ss_pred ---cccceeeeeeEeeecccC--CCCCcCCHHHHHHHhhh----cCCcEEEEc--CCCCCCccc----HHHHHHHHHhcC
Q 022463 97 ---KKISAVSIFFETMPYRLN--ESTGYIDYDQLEKSATL----FRPKLIVAG--ASAYARLYD----YERIRKVCNKQK 161 (297)
Q Consensus 97 ---~~~~~~g~~~~~v~~~~~--~~~~~~d~~~l~~~l~~----~~~~~v~~~--~~~~G~~~~----~~~i~~la~~~g 161 (297)
.+.......+..++++.+ ...+.+|+++|++.+++ .++++|+++ ++|+|...+ +++|.++|++||
T Consensus 154 ~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l~~~~~ 233 (426)
T 1sff_A 154 PYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHG 233 (426)
T ss_dssp TTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHT
T ss_pred ccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHHHcC
Confidence 000000001223443321 01345789999999973 367788883 456886777 899999999999
Q ss_pred CEEEEehhhhcccccccC-CCC-CCC-CccEEEecCCccCCCC-CceEEEEecCchhhccCCccchhhHHHHhhhcccCC
Q 022463 162 AIMLADMAHISGLVAAGV-IPS-PFE-YADVVTTTTHKSLRGP-RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPG 237 (297)
Q Consensus 162 ~~livD~a~~~g~~~~~~-~~~-~~~-~~D~~~~s~~K~l~gp-~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 237 (297)
+++|+|++|+ +....+. ... ... .+|+++ ++|++++. +-|+++++++ +.+.+..... .
T Consensus 234 ~~li~De~~~-~~~~~g~~~~~~~~~~~~di~s--~sK~~~~GlriG~~~~~~~--------------~~~~l~~~~~-~ 295 (426)
T 1sff_A 234 IMLIADEVQS-GAGRTGTLFAMEQMGVAPDLTT--FAKSIAGGFPLAGVTGRAE--------------VMDAVAPGGL-G 295 (426)
T ss_dssp CEEEEECTTT-TTTTTSSSSGGGGTTSCCSEEE--ECGGGGTSSCCEEEEEEHH--------------HHTTSCTTSB-C
T ss_pred CEEEEechhh-ccCcccchhhhhhcCCCCCEEE--EcccccCCCceEEEEEcHH--------------HHhhhccCCc-C
Confidence 9999999998 4322111 000 001 468774 45988641 1199999874 3333322111 1
Q ss_pred CCCCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccC
Q 022463 238 LQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNN 283 (297)
Q Consensus 238 ~~~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~ 283 (297)
...+.+.+..+++.++|+.+.+. .+.++.+++.+++.+.|++
T Consensus 296 ~~~~~~~~~~~a~~aal~~~~~~----~~~~~~~~~~~~l~~~l~~ 337 (426)
T 1sff_A 296 GTYAGNPIACVAALEVLKVFEQE----NLLQKANDLGQKLKDGLLA 337 (426)
T ss_dssp CSSSSCHHHHHHHHHHHHHHHHT----THHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHH
Confidence 12345667778888888887643 3455566666666666654
No 189
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.66 E-value=1.2e-15 Score=135.91 Aligned_cols=211 Identities=12% Similarity=0.080 Sum_probs=135.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcceEEecCChH-HHHHHHHHhcCCCCeEEEecCCCCCcccccccccccccceeeeeeE
Q 022463 29 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFE 107 (297)
Q Consensus 29 ~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~-~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 107 (297)
.+++ +++++++++++++ +++++|++ ++..++.++. ||+|+++..+|.+.... +...|..+.
T Consensus 53 ~~lr----~~la~~~~~~~~~----i~~t~g~~~al~~~~~~l~--gd~Vi~~~p~~~~~~~~--------~~~~g~~~~ 114 (350)
T 3fkd_A 53 GTLR----QMLAKRNSVDNNA----ILVTNGPTAAFYQIAQAFR--GSRSLIAIPSFAEYEDA--------CRMYEHEVC 114 (350)
T ss_dssp HHHH----HHHHHHTTCCGGG----EEEESHHHHHHHHHHHHTT--TCEEEEEESCCHHHHHH--------HHHTTCEEE
T ss_pred HHHH----HHHHHHhCcCHHH----EEEcCCHHHHHHHHHHHHC--CCEEEEeCCCcHHHHHH--------HHHcCCeEE
Confidence 5666 8999999998764 88888884 6665667666 99999999777665432 222333343
Q ss_pred eeeccc-CCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcC-CEEEEehhhhcccccccCCCCC
Q 022463 108 TMPYRL-NESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQK-AIMLADMAHISGLVAAGVIPSP 183 (297)
Q Consensus 108 ~v~~~~-~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g-~~livD~a~~~g~~~~~~~~~~ 183 (297)
.+ +. + +...+++ + ++++|++ +++| +|.+.|++++.++++.++ .++|+|++|+............
T Consensus 115 ~v--~~~~-~~~~~~~--------~-~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~~~~~~~~~~ 182 (350)
T 3fkd_A 115 FY--PSNE-DIGEADF--------S-NMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIRPAD 182 (350)
T ss_dssp EE--ETTS-CGGGSCC--------T-TCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSCSSCCCCGGG
T ss_pred EE--ecCC-ccccCcc--------C-CCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhccCcchhhHH
Confidence 34 45 3 2234444 3 8999888 7878 899999999999999876 7999999986432221110000
Q ss_pred C--CCccEEEecCCccCC--CCCceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHHHHHHHHhh
Q 022463 184 F--EYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 259 (297)
Q Consensus 184 ~--~~~D~~~~s~~K~l~--gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~ 259 (297)
+ .+.++++.|++|+++ |.+.|+++.++ ++.+.+..... ..+++.+..+++.++|+...
T Consensus 183 ~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~--------------~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~- 244 (350)
T 3fkd_A 183 IKGRKNLVMVYSFSHAYGIPGLRIGYIVANK--------------DFMKRVAAFST---PWAVNALAIEAAKFILIHPA- 244 (350)
T ss_dssp GTTCSSEEEEEESHHHHSCGGGCCEEEECCH--------------HHHHHHHTTCC---TTCSCHHHHHHHHHHHHCTT-
T ss_pred hhcCCCEEEEecCchhccCcchheEeEEeCH--------------HHHHHHHHhCC---CCCCCHHHHHHHHHHHhCHH-
Confidence 1 145588999999875 33349999866 44554444322 23456666666656555322
Q ss_pred hcChhhHHHHhhhhHHHHHhhccCCCCccc
Q 022463 260 LITFSHIHVFSLHVYPAFVSNQNNSENIEE 289 (297)
Q Consensus 260 ~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~ 289 (297)
. -.+++++.. ++++++.+.|++++.++-
T Consensus 245 ~-~~~~~~~~~-~~~~~l~~~L~~~~~~~~ 272 (350)
T 3fkd_A 245 Q-FTLPIRKWQ-RNTVDFITALNRLDGVEV 272 (350)
T ss_dssp T-TCCCHHHHH-HHHHHHHHHHHHSTTEEE
T ss_pred H-HHHHHHHHH-HHHHHHHHHHhcCCCcEE
Confidence 0 134455444 788888888888776553
No 190
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.66 E-value=6.3e-16 Score=141.38 Aligned_cols=239 Identities=12% Similarity=0.072 Sum_probs=139.9
Q ss_pred cCCCchhHHHHHHHHHHHHHHHcCC--CCCCCcceEEecCChH-HHHHH--HHHhcCCCCeEEEecCCCCCccccccccc
Q 022463 21 YYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGSP-SNFQV--YTALLKPHDRIMALDLPHGGHLSHGYQTD 95 (297)
Q Consensus 21 ~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~~v~~~sG~~-~~~~~--~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~ 95 (297)
.|+......++++.+.+++....+. +++. ..+++|+|++ ++..+ +.+++.+||+|+++...|.+....
T Consensus 87 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~--~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~----- 159 (420)
T 4f4e_A 87 GYLPIDGIAAYDASVQKLLLGDDSPLIAAGR--VVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRAL----- 159 (420)
T ss_dssp CCCCTTCCHHHHHHHHHHHHCTTCHHHHTTC--EEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHH-----
T ss_pred CCCCCCCcHHHHHHHHHHhcCCCccccccCc--eEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHH-----
Confidence 4444556677885555555433321 3331 1378888874 65555 446689999999999777665332
Q ss_pred ccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhh--cCCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCEEEEeh
Q 022463 96 TKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL--FRPKLIVA-GASA-YARLYD---YERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 96 ~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~--~~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~livD~ 168 (297)
+...|..+..+++. +++++.+|++.+++.+++ .+++++++ +++| +|.+.+ +++|.++|++||+++|+|+
T Consensus 160 ---~~~~g~~~~~v~~~-~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De 235 (420)
T 4f4e_A 160 ---FDMAGFEVVAYPYY-DAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDI 235 (420)
T ss_dssp ---HHHTTCCEEEEECE-ETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred ---HHHcCCeEEEeeee-ccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcc
Confidence 22233334444431 225688999999999983 25677777 6777 887755 5688899999999999999
Q ss_pred hhhcccccccCCCCC------CCCccEEEecCCccCCC--CCceEEEEe-cCchhhccCCccchhhHH----HHhhhccc
Q 022463 169 AHISGLVAAGVIPSP------FEYADVVTTTTHKSLRG--PRGAMIFFR-KGVKEINKQGKEVFYDYE----EKINQAVF 235 (297)
Q Consensus 169 a~~~g~~~~~~~~~~------~~~~D~~~~s~~K~l~g--p~gG~i~~~-~~~~~~~~~g~~~~~~~~----~~~~~~~~ 235 (297)
++.......+....+ ..+.++++.|++|.++. .+-|+++.. .+. +.. ..+.....
T Consensus 236 ~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~------------~~~~~~~~~~~~~~~ 303 (420)
T 4f4e_A 236 AYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSIITDSK------------DEAARVLSQLKRVIR 303 (420)
T ss_dssp SCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSSH------------HHHHHHHHHHHHHHH
T ss_pred ccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCCH------------HHHHHHHHHHHHHHh
Confidence 975332211000000 01356889999998742 223887642 211 111 11211111
Q ss_pred CCCCCCCchHHHHHHHHHHHHHh-----hhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 236 PGLQGGPHNHTITGLAVALKQVC-----TLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 236 ~~~~~t~~~~~~~al~~al~~~~-----~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
.. .++++.....++..+++... +. .+++++++.++..+++.+.|+++
T Consensus 304 ~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 355 (420)
T 4f4e_A 304 TN-YSNPPTHGGAIVAAVLASPELRASWVQ-ELGEMRDRIRAMRNGLVERLKAA 355 (420)
T ss_dssp TT-TSSCCSHHHHHHHHHHHCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cc-cCCCCHHHHHHHHHHhcCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhc
Confidence 11 22334344444444443211 22 46778888888888888888876
No 191
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.66 E-value=6.5e-15 Score=136.36 Aligned_cols=238 Identities=11% Similarity=0.015 Sum_probs=141.5
Q ss_pred HHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhc--------CCCCeEEEecCCCCCccccccccc-----cc
Q 022463 32 ESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALL--------KPHDRIMALDLPHGGHLSHGYQTD-----TK 97 (297)
Q Consensus 32 e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~--------~~gd~Vl~~~~~~~~~~~~~~~~~-----~~ 97 (297)
.++..++++++++.+.+. +++++|. .++..+++.+. .+++.|++.+..+++......... ..
T Consensus 97 ~~~la~~l~~~~~~~~~~----v~~~~gGseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 172 (460)
T 3gju_A 97 SITLAKMIIDRAPKGMSR----VYFGLSGSDANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHN 172 (460)
T ss_dssp HHHHHHHHHHHSCTTEEE----EEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTT
T ss_pred HHHHHHHHHhhCCCCcCE----EEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCccccc
Confidence 334448888988766653 6666555 68887887775 356899998877655431111000 00
Q ss_pred ccceeeeeeEeeeccc--CCCCCcCC--------HHHHHHHhhh---cCCcEEEEcCCC--CCCccc----HHHHHHHHH
Q 022463 98 KISAVSIFFETMPYRL--NESTGYID--------YDQLEKSATL---FRPKLIVAGASA--YARLYD----YERIRKVCN 158 (297)
Q Consensus 98 ~~~~~g~~~~~v~~~~--~~~~~~~d--------~~~l~~~l~~---~~~~~v~~~~~~--~G~~~~----~~~i~~la~ 158 (297)
........+..++++. ...+..++ +++|++++++ .++++|++.+.+ .|...+ +++|.++|+
T Consensus 173 ~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~ 252 (460)
T 3gju_A 173 AFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLK 252 (460)
T ss_dssp TTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHH
T ss_pred ccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHH
Confidence 0000111122333222 10111223 6889998873 256777774333 455454 899999999
Q ss_pred hcCCEEEEehhhh-ccccc----ccCCCCCCCCccEEEecCCccCCCC--CceEEEEecCchhhccCCccchhhHHHHhh
Q 022463 159 KQKAIMLADMAHI-SGLVA----AGVIPSPFEYADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKIN 231 (297)
Q Consensus 159 ~~g~~livD~a~~-~g~~~----~~~~~~~~~~~D~~~~s~~K~l~gp--~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~ 231 (297)
+||+++|+|++|+ .|-.. ...... ..|++++| |+|++. +-|+++++++ +.+.+.
T Consensus 253 ~~~~llI~DEv~~g~gr~g~~~~~~~~~~---~pdi~t~s--K~l~gG~~~lg~v~~~~~--------------i~~~~~ 313 (460)
T 3gju_A 253 KYDVLLVADEVVTGFGRLGTMFGSDHYGI---KPDLITIA--KGLTSAYAPLSGVIVADR--------------VWQVLV 313 (460)
T ss_dssp HTTCEEEEECTTTTTTTTSSSCHHHHHTC---CCSEEEEC--GGGTTTSSCCEEEEEEHH--------------HHHHHH
T ss_pred HcCCEEEEeccccCCCcccccchHhhcCC---CCCeeeee--hhhcCCCCCeEEEEECHH--------------HHHHHh
Confidence 9999999999987 32211 000011 46888766 999773 4488888884 444443
Q ss_pred hc-----c-cCCCCCCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcccccC
Q 022463 232 QA-----V-FPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIEEDKG 292 (297)
Q Consensus 232 ~~-----~-~~~~~~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~~~g 292 (297)
.. . .-..+.+.+....++..++|+.+.+..-++++++....+.+.+.+.+++.+.+..++|
T Consensus 314 ~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 380 (460)
T 3gju_A 314 QGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGGHKNVGEVRG 380 (460)
T ss_dssp HHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEE
T ss_pred cccccccccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEee
Confidence 11 1 1111334466777888888988766523667777777777778777777776655544
No 192
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.66 E-value=4.2e-15 Score=136.25 Aligned_cols=237 Identities=13% Similarity=0.048 Sum_probs=131.8
Q ss_pred HHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhc--------CCCCeEEEecCCCCCccccccccccccc-c
Q 022463 31 AESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALL--------KPHDRIMALDLPHGGHLSHGYQTDTKKI-S 100 (297)
Q Consensus 31 ~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~--------~~gd~Vl~~~~~~~~~~~~~~~~~~~~~-~ 100 (297)
..++.+++++++++.+.++ +++++|. .++..+++.++ .++|.|++.+..|++............. .
T Consensus 73 ~~~~l~~~la~~~~~~~~~----v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 148 (430)
T 3i4j_A 73 VLEEYAGRLARFVGLPTFR----FWAVSGGSEATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARR 148 (430)
T ss_dssp HHHHHHHHHHHHTTCTTCE----EEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTC------------------
T ss_pred HHHHHHHHHHHhCCCCCCE----EEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccc
Confidence 3334448899999887654 7777665 68877777765 4578999988776654322111110000 0
Q ss_pred --eee--e--eeEeeecccCCCCCcCCHHHHHHHhhh---cCCcEEEEcCC---CCCCccc----HHHHHHHHHhcCCEE
Q 022463 101 --AVS--I--FFETMPYRLNESTGYIDYDQLEKSATL---FRPKLIVAGAS---AYARLYD----YERIRKVCNKQKAIM 164 (297)
Q Consensus 101 --~~g--~--~~~~v~~~~~~~~~~~d~~~l~~~l~~---~~~~~v~~~~~---~~G~~~~----~~~i~~la~~~g~~l 164 (297)
... . .+..++.+.....+..|+++|++++++ .++++|+++++ +.|...+ +++|.++|++||+++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~l 228 (430)
T 3i4j_A 149 ELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIF 228 (430)
T ss_dssp -------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEE
T ss_pred cccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEE
Confidence 000 0 111122111000134567899999974 35667777433 3455555 899999999999999
Q ss_pred EEehhhh-ccccc----ccCC-CCCCCCccEEEecCCccCCCC--CceEEEEecCchhhccCCccchhhHHHHhhhcc--
Q 022463 165 LADMAHI-SGLVA----AGVI-PSPFEYADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV-- 234 (297)
Q Consensus 165 ivD~a~~-~g~~~----~~~~-~~~~~~~D~~~~s~~K~l~gp--~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~-- 234 (297)
|+|++|+ .+... .... .. ..|++++| |++++. +-|+++.++ ++.+.+....
T Consensus 229 i~DEv~~~~~~~g~~~~~~~~~~~---~~di~t~s--K~l~~G~~r~G~~~~~~--------------~i~~~~~~~~~~ 289 (430)
T 3i4j_A 229 IADEVMSGMGRCGSPLALSRWSGV---TPDIAVLG--KGLAAGYAPLAGLLAAP--------------QVYETVMGGSGA 289 (430)
T ss_dssp EEECTTTTTTTTSSSSGGGGTTTC---CCSEEEEC--GGGTTTSSCCEEEEECH--------------HHHHHHHHTTCB
T ss_pred EEechhhCCCcccchhhhhhhcCC---CCcEEEEc--ccccCCccccEEEEECH--------------HHHHHHhccCCc
Confidence 9999986 32211 1111 11 46777765 998652 228888877 3444444321
Q ss_pred -cCCCCCCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcccc
Q 022463 235 -FPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIEED 290 (297)
Q Consensus 235 -~~~~~~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~~ 290 (297)
....+.+.+.+..++..++|+.+.+..-.++++++...+.+.+.+.+++.+.+...
T Consensus 290 ~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 346 (430)
T 3i4j_A 290 FMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFPQMMQV 346 (430)
T ss_dssp CCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE
T ss_pred ccccCCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 11113345667777778888877654234555555556666666555455555443
No 193
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.66 E-value=1.4e-15 Score=139.12 Aligned_cols=171 Identities=13% Similarity=-0.000 Sum_probs=114.7
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCChH-HH--HHHHHHhcCC------------CCeEEEecCCC
Q 022463 20 RYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SN--FQVYTALLKP------------HDRIMALDLPH 84 (297)
Q Consensus 20 ~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~~-~~--~~~~~~~~~~------------gd~Vl~~~~~~ 84 (297)
..|+......+++ +.+++++++++++ |++|+|++ ++ ..++.++.++ +|+|+++.++|
T Consensus 70 ~~Y~~~~G~~~lr----~~ia~~~~~~~~~----i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y 141 (422)
T 3d6k_A 70 RNYGGLLGIADIR----ELWAEALGLPADL----VVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGY 141 (422)
T ss_dssp TSSCCSSCCHHHH----HHHHHHHTCCGGG----EEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCC
T ss_pred hCCCCCCCCHHHH----HHHHHHhCCChhH----EEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCcc
Confidence 3566556678888 7788888988764 99999985 44 2355666555 34799998776
Q ss_pred CCcccccccccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE--cCCC-CCCcccHH---HHHHHHH
Q 022463 85 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA--GASA-YARLYDYE---RIRKVCN 158 (297)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~--~~~~-~G~~~~~~---~i~~la~ 158 (297)
++.... +...|..+..+ +.++ ++ +|++.+++.+++.++++|++ +++| +|.+.|.+ +|.++|+
T Consensus 142 ~~~~~~--------~~~~g~~~~~v--~~~~-~g-~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~ 209 (422)
T 3d6k_A 142 DRHFTI--------TEHFGFEMINV--PMTD-EG-PDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMST 209 (422)
T ss_dssp HHHHHH--------HHHHTCEEEEE--EEET-TE-ECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCC
T ss_pred HHHHHH--------HHHcCCEEEec--CCCC-CC-CCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHh
Confidence 665432 22334334444 4442 33 99999999997546888885 5777 89888877 7777787
Q ss_pred -hcCCEEEEehhhhc-ccccccCCCCCC---------CCccEEEecCCccCCCC--CceEEEEecC
Q 022463 159 -KQKAIMLADMAHIS-GLVAAGVIPSPF---------EYADVVTTTTHKSLRGP--RGAMIFFRKG 211 (297)
Q Consensus 159 -~~g~~livD~a~~~-g~~~~~~~~~~~---------~~~D~~~~s~~K~l~gp--~gG~i~~~~~ 211 (297)
+||+++|+|++|+. +....+....++ .+.++++.|++|+ .+| +.|+++++++
T Consensus 210 ~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~GlriG~~~~~~~ 274 (422)
T 3d6k_A 210 AAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-THAGSGVSFFASSKE 274 (422)
T ss_dssp SSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SCTTSSCEEEECCHH
T ss_pred hccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cCcccceEEEEeCHH
Confidence 99999999999974 222111000111 1456889999997 344 3499998873
No 194
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.66 E-value=1.3e-15 Score=137.86 Aligned_cols=241 Identities=11% Similarity=0.063 Sum_probs=137.7
Q ss_pred cCCCchhHHHHHHHHHHHHHHHcCC--CCCCCcceEEecCChH-HHHHH--HHHhcCCCCeEEEecCCCCCccccccccc
Q 022463 21 YYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGSP-SNFQV--YTALLKPHDRIMALDLPHGGHLSHGYQTD 95 (297)
Q Consensus 21 ~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~~v~~~sG~~-~~~~~--~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~ 95 (297)
.|+......++++.+.+++....+. +++. ..+++++|++ ++..+ +.+++++||+|+++...|.+....
T Consensus 65 ~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~--~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~----- 137 (397)
T 3fsl_A 65 LYLPMEGLNCYRHAIAPLLFGADHPVLKQQR--VATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAI----- 137 (397)
T ss_dssp CCCCTTCCHHHHHHHHHHHHCTTCHHHHTTC--EEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHH-----
T ss_pred cCCCCCchHHHHHHHHHHHhcCCcccccccc--eEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHH-----
Confidence 3444455677774444444333221 3431 0278888874 65545 345689999999998777665332
Q ss_pred ccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhc--CCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCEEEEeh
Q 022463 96 TKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVA-GASA-YARLYD---YERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 96 ~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~--~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~livD~ 168 (297)
+...|..+..+++..+ +++.+|++++++.+++. +++++++ +++| +|.+.+ +++|.++|++||+++|+|+
T Consensus 138 ---~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De 213 (397)
T 3fsl_A 138 ---FAGAGFEVSTYPWYDE-ATNGVRFNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDI 213 (397)
T ss_dssp ---HHHTTCCEEEECCEET-TTTEECHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ---HHHcCCceEEEeeeec-cCCcCcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEec
Confidence 2223333444433212 46789999999999842 5666666 6777 787755 5589999999999999999
Q ss_pred hhhcccccccCCCCC------CCCccEEEecCCccCC--CCCceEEEEecCchhhccCCccchhhHHH----HhhhcccC
Q 022463 169 AHISGLVAAGVIPSP------FEYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEE----KINQAVFP 236 (297)
Q Consensus 169 a~~~g~~~~~~~~~~------~~~~D~~~~s~~K~l~--gp~gG~i~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~ 236 (297)
+++......+....+ .....+++.|++|.++ |.+-|+++...... +..+ .+......
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~~~~~-----------~~~~~~~~~~~~~~~~ 282 (397)
T 3fsl_A 214 AYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCEDA-----------EAAGRVLGQLKATVRR 282 (397)
T ss_dssp SCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCCEEEEEECSSH-----------HHHHHHHHHHHHHHHT
T ss_pred CchhhccCcccccHHHHHHHhcCCCEEEEecccccccCcCCCeeEEEEecCCH-----------HHHHHHHHHHHHHHHh
Confidence 976443221000000 0134578899999874 22238887632100 1111 11111001
Q ss_pred CCCCCCchHHHHHHHHHHHHH-----hhhcChhhHHHHhhhhHHHHHhhccCCC
Q 022463 237 GLQGGPHNHTITGLAVALKQV-----CTLITFSHIHVFSLHVYPAFVSNQNNSE 285 (297)
Q Consensus 237 ~~~~t~~~~~~~al~~al~~~-----~~~~g~~~~~~~~~~l~~~l~~~l~~~~ 285 (297)
. .++++.....++..++..- ... .+++++++.++..+++.+.|++++
T Consensus 283 ~-~~~~~~~~~~~~~~~l~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~ 334 (397)
T 3fsl_A 283 N-YSSPPNFGAQVVAAVLNDEALKASWLK-EVEEMRTRILAMRQELVKVLSTEM 334 (397)
T ss_dssp T-TSSCCSHHHHHHHHHHTSHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred c-cCCCCHHHHHHHHHHhcCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcC
Confidence 1 2233434444444334321 123 567778888888888888887764
No 195
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.65 E-value=2e-14 Score=132.58 Aligned_cols=239 Identities=10% Similarity=0.004 Sum_probs=137.4
Q ss_pred HHHHHHHHHHHHcCCCCCCCcceEEec-CChHHHHHHHHHhc-----C---CCCeEEEecCCCCCcccccccccccc---
Q 022463 31 AESLCQKRALEAFRLDPEKWGVNVQSL-SGSPSNFQVYTALL-----K---PHDRIMALDLPHGGHLSHGYQTDTKK--- 98 (297)
Q Consensus 31 ~e~~~~~~la~~~g~~~~~~~~~v~~~-sG~~~~~~~~~~~~-----~---~gd~Vl~~~~~~~~~~~~~~~~~~~~--- 98 (297)
...+.+++++++++.+.+ ++++ +|+.++..+++.+. . ++|.|++.+..+++............
T Consensus 92 ~~~~la~~l~~~~~~~~~-----v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 166 (452)
T 3n5m_A 92 PAIKLAEKLNEWLGGEYV-----IFFSNSGSEANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRR 166 (452)
T ss_dssp HHHHHHHHHHHHHTSCEE-----EEEESSHHHHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGT
T ss_pred HHHHHHHHHHHhCCCCce-----EEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhc
Confidence 334444889999887653 5555 45578887777765 5 78999998877665431111110000
Q ss_pred --cceeeeeeEeeecccCCCC---------CcCCHHHHHHHhh---hcCCcEEEEc-C-CCCCCccc----HHHHHHHHH
Q 022463 99 --ISAVSIFFETMPYRLNEST---------GYIDYDQLEKSAT---LFRPKLIVAG-A-SAYARLYD----YERIRKVCN 158 (297)
Q Consensus 99 --~~~~g~~~~~v~~~~~~~~---------~~~d~~~l~~~l~---~~~~~~v~~~-~-~~~G~~~~----~~~i~~la~ 158 (297)
..-....+..++.+..... ...++++|++.++ ..++++|++. . +|+|...| +++|.++|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~ep~~~n~G~~~~~~~~l~~l~~l~~ 246 (452)
T 3n5m_A 167 YQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWELSETIAAFIMEPIITGGGILMAPQDYMKAVHETCQ 246 (452)
T ss_dssp TTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHH
T ss_pred cccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCeeeCCHHHHHHHHHHHH
Confidence 0000000112221111000 1111899999997 2256777774 3 35776676 899999999
Q ss_pred hcCCEEEEehhhh-ccccc----ccCCCCCCCCccEEEecCCccCCCC-Cc-eEEEEecCchhhccCCccchhhHHHHhh
Q 022463 159 KQKAIMLADMAHI-SGLVA----AGVIPSPFEYADVVTTTTHKSLRGP-RG-AMIFFRKGVKEINKQGKEVFYDYEEKIN 231 (297)
Q Consensus 159 ~~g~~livD~a~~-~g~~~----~~~~~~~~~~~D~~~~s~~K~l~gp-~g-G~i~~~~~~~~~~~~g~~~~~~~~~~~~ 231 (297)
+||+++|+|++|+ .|... ...... ..|++++| |++++. -. |+++++++ +.+.+.
T Consensus 247 ~~~~llI~DEv~~g~g~~g~~~~~~~~~~---~~di~t~s--K~l~~G~~~ig~~~~~~~--------------i~~~~~ 307 (452)
T 3n5m_A 247 KHGALLISDEVICGFGRTGKAFGFMNYDV---KPDIITMA--KGITSAYLPLSATAVKRE--------------IYEAFK 307 (452)
T ss_dssp HHTCEEEEECTTTTTTTTSSSSGGGGTTC---CCSEEEEC--GGGGTTSSCCEEEEEEHH--------------HHGGGC
T ss_pred HcCCEEEEecchhCCCcccccchhhhcCC---CCCEEeec--ccccCCCcceEEEEECHH--------------HHHHHh
Confidence 9999999999986 32111 111111 46888765 887653 33 89988884 344332
Q ss_pred h----cc-cCCCCCCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcccccCC
Q 022463 232 Q----AV-FPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIEEDKGR 293 (297)
Q Consensus 232 ~----~~-~~~~~~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~~~g~ 293 (297)
. .. ....+.+.+....++..++|+.+.+..-.+++++....+.+.+.+.+++.+.+...+|.
T Consensus 308 ~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~ 374 (452)
T 3n5m_A 308 GKGEYEFFRHINTFGGNPAACALALKNLEIIENENLIERSAQMGSLLLEQLKEEIGEHPLVGDIRGK 374 (452)
T ss_dssp SSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEES
T ss_pred hccCCCCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 2 10 11113345667777778888877654224556666666666666555666666555544
No 196
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.65 E-value=4.2e-15 Score=134.62 Aligned_cols=227 Identities=12% Similarity=0.108 Sum_probs=130.9
Q ss_pred HHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhc-------CCCCeEEEecCCCCCcccccccccc-----ccc
Q 022463 33 SLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALL-------KPHDRIMALDLPHGGHLSHGYQTDT-----KKI 99 (297)
Q Consensus 33 ~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~-------~~gd~Vl~~~~~~~~~~~~~~~~~~-----~~~ 99 (297)
++.+++++++++.+ + +++++|. .++..+++.+. .++|.|++.+..|++.......... ...
T Consensus 81 ~~l~~~la~~~~~~--~----v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~ 154 (395)
T 3nx3_A 81 AAAAKNLAKASALE--R----VFFTNSGTESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPF 154 (395)
T ss_dssp HHHHHHHHHHHTCS--E----EEEESSHHHHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGG
T ss_pred HHHHHHHHHhcCCC--e----EEEeCCHHHHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCccccccc
Confidence 33348888998843 2 6665554 67777776654 4689999998777655321111110 000
Q ss_pred ceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-c-CCCCCCccc----HHHHHHHHHhcCCEEEEehhhh-c
Q 022463 100 SAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-G-ASAYARLYD----YERIRKVCNKQKAIMLADMAHI-S 172 (297)
Q Consensus 100 ~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~-~~~~G~~~~----~~~i~~la~~~g~~livD~a~~-~ 172 (297)
...+..+..+ +. .|+++|++++++ ++++|++ + .++.|...| +++|.++|++||+++|+|++|+ .
T Consensus 155 ~~~~~~~~~~--~~------~d~~~l~~~l~~-~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~ 225 (395)
T 3nx3_A 155 KPLISGVKFA--KY------NDISSVEKLVNE-KTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGM 225 (395)
T ss_dssp CSCCSCEEEE--CT------TCHHHHHTTCCT-TEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred CCCCCCcEEe--CC------CCHHHHHHhccC-CeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCC
Confidence 0000111111 21 279999999986 7888888 3 333676666 8999999999999999999986 3
Q ss_pred ccccccCCCCCC-CCccEEEecCCccCCCCCc-eEEEEecCchhhccCCccchhhH-HHHhhhcccCCCCCCCchHHHHH
Q 022463 173 GLVAAGVIPSPF-EYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDY-EEKINQAVFPGLQGGPHNHTITG 249 (297)
Q Consensus 173 g~~~~~~~~~~~-~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~t~~~~~~~a 249 (297)
|........... ...|++++| |.++++.. |++++++ +. .+.+..... ....+.+.+..++
T Consensus 226 g~~g~~~~~~~~~~~~d~~t~s--K~~~~G~~~G~~~~~~--------------~~~~~~~~~~~~-~~~~~~~~~~~~a 288 (395)
T 3nx3_A 226 GRSGKFFAYEHAQILPDIMTSA--KALGCGLSVGAFVINQ--------------KVASNSLEAGDH-GSTYGGNPLVCAG 288 (395)
T ss_dssp TTTSSSSGGGGGTCCCSEEEEC--GGGTTTSCCEEEEECH--------------HHHHHHSCTTCC-SSCBSCCHHHHHH
T ss_pred CcCCcchhHHhcCCCCCEEEec--ccccCCCceEEEEEch--------------hhhhhhcCCccc-CCCCCCCHHHHHH
Confidence 221110000000 146877765 88865434 8888887 34 444433211 1123446677777
Q ss_pred HHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCccccc
Q 022463 250 LAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIEEDK 291 (297)
Q Consensus 250 l~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~~~ 291 (297)
..++++.+.+..-.+++++....+.+.+.+.+.+.+.+...+
T Consensus 289 a~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 330 (395)
T 3nx3_A 289 VNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKRK 330 (395)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEE
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 778888775441244445545555555555444455554443
No 197
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.64 E-value=7.4e-15 Score=135.39 Aligned_cols=224 Identities=11% Similarity=0.027 Sum_probs=133.0
Q ss_pred HHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhcC--------CCCeEEEecCCCCCcccc-cccccc------c
Q 022463 34 LCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALLK--------PHDRIMALDLPHGGHLSH-GYQTDT------K 97 (297)
Q Consensus 34 ~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~~--------~gd~Vl~~~~~~~~~~~~-~~~~~~------~ 97 (297)
+.+++++++++.+.++ +++++|. .++..+++++.. ++|+|++.+..+++.... ...... .
T Consensus 97 ~l~~~la~~~~~~~~~----v~~~~ggsea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~ 172 (449)
T 3a8u_X 97 QLAEKITDLTPGNLNH----VFFTDSGSECALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLF 172 (449)
T ss_dssp HHHHHHHTTSSTTEEE----EEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTT
T ss_pred HHHHHHHHhCCCCCCE----EEEcCcHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhcccc
Confidence 3448899999876653 7776655 677767776643 789999988776654321 111000 0
Q ss_pred ccceeeeeeEeeecccCC-CC-CcCC--------HHHHHHHhhh---cCCcEEEEcCC--CCCCccc----HHHHHHHHH
Q 022463 98 KISAVSIFFETMPYRLNE-ST-GYID--------YDQLEKSATL---FRPKLIVAGAS--AYARLYD----YERIRKVCN 158 (297)
Q Consensus 98 ~~~~~g~~~~~v~~~~~~-~~-~~~d--------~~~l~~~l~~---~~~~~v~~~~~--~~G~~~~----~~~i~~la~ 158 (297)
+....+ +..++++..- .. ..+| +++|++.+++ .++++|++++. ++|...| +++|.++|+
T Consensus 173 ~~~~~~--~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~ 250 (449)
T 3a8u_X 173 GQPMQD--VDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICN 250 (449)
T ss_dssp CCCSCS--EEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHH
T ss_pred CCCCCC--CeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHH
Confidence 000111 2233322210 00 1245 9999999974 25677777543 3788788 999999999
Q ss_pred hcCCEEEEehhhh-cccccc--cCCCCCCCCccEEEecCCccCCC--CCceEEEEecCchhhccCCccchhhHHHHhhhc
Q 022463 159 KQKAIMLADMAHI-SGLVAA--GVIPSPFEYADVVTTTTHKSLRG--PRGAMIFFRKGVKEINKQGKEVFYDYEEKINQA 233 (297)
Q Consensus 159 ~~g~~livD~a~~-~g~~~~--~~~~~~~~~~D~~~~s~~K~l~g--p~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~ 233 (297)
+||+++|+|++|+ .|.... ..... ....|++++ +|+|++ .+.|+++++++ +.+.+...
T Consensus 251 ~~~~~li~Dev~~~~g~~g~~~~~~~~-~~~~di~s~--sK~l~~G~~~~G~~~~~~~--------------~~~~l~~~ 313 (449)
T 3a8u_X 251 QHNILLVFDEVITGFGRTGSMFGADSF-GVTPDLMCI--AKQVTNGAIPMGAVIASTE--------------IYQTFMNQ 313 (449)
T ss_dssp HHTCEEEEECTTTTTTTTSSSSHHHHH-TCCCSEEEE--CGGGGTTSSCCEEEEEEHH--------------HHHHHHTC
T ss_pred HhCCEEEEeccccCccccCcchhhhhc-CCCCCEEEE--cccccCCCCceEEEEECHH--------------HHHHhhcc
Confidence 9999999999994 543211 00000 003687755 499876 23588888773 33333321
Q ss_pred c--------cCCCCCCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 234 V--------FPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 234 ~--------~~~~~~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
. ......+.+....+++.++|+.+.+. .+.++.+++.+++.+.|+++
T Consensus 314 ~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~----~~~~~~~~~~~~l~~~L~~l 368 (449)
T 3a8u_X 314 PTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQKE----NLVQSVAEVAPHFEKALHGI 368 (449)
T ss_dssp SSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHHT----THHHHHHHHHHHHHHHHHTT
T ss_pred CcccccccccccCCCcccHHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHH
Confidence 0 01112344667778888888877643 35566666777777777664
No 198
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.63 E-value=1.6e-14 Score=132.81 Aligned_cols=216 Identities=14% Similarity=0.132 Sum_probs=121.8
Q ss_pred HHHHHHHHcCCCCCCCcceEEec-CChHHHHHHHHHhc---------CCC-CeEEEecCCCCCcccccccccccccceee
Q 022463 35 CQKRALEAFRLDPEKWGVNVQSL-SGSPSNFQVYTALL---------KPH-DRIMALDLPHGGHLSHGYQTDTKKISAVS 103 (297)
Q Consensus 35 ~~~~la~~~g~~~~~~~~~v~~~-sG~~~~~~~~~~~~---------~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 103 (297)
.+++++++++.+. ++++ +|+.++..+++.+. .+| |+|++.+..+++................+
T Consensus 112 l~~~la~~~g~~~------v~~~~sGseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~ 185 (433)
T 1z7d_A 112 CERYLTNLLGYDK------VLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSN 185 (433)
T ss_dssp HHHHHHHHHTCSE------EEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------
T ss_pred HHHHHHhhcCCCe------EEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCcccccc
Confidence 3388888887532 5555 55578877776542 467 99999887765543221111000000000
Q ss_pred ee---eEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEEcCC--CCCCcc----cHHHHHHHHHhcCCEEEEehhhhccc
Q 022463 104 IF---FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGAS--AYARLY----DYERIRKVCNKQKAIMLADMAHISGL 174 (297)
Q Consensus 104 ~~---~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~--~~G~~~----~~~~i~~la~~~g~~livD~a~~~g~ 174 (297)
.. ...+.++. .|++++++++...++++|++.+. ++|... ++++|.++|++||+++|+|++|+ |.
T Consensus 186 ~~p~~~~v~~~~~------~d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~ 258 (433)
T 1z7d_A 186 FGPFAPQFSKVPY------DDLEALEEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQT-GL 258 (433)
T ss_dssp ------CEEEECT------TCHHHHHHHHTSTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TT
T ss_pred CCCCCCCeEEeCC------CCHHHHHHHhCCCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCcc-CC
Confidence 00 01122222 38999999994227888887433 257654 78999999999999999999996 43
Q ss_pred ccccC-CC-CCCC-CccEEEecCCccCCCC--CceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHH
Q 022463 175 VAAGV-IP-SPFE-YADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITG 249 (297)
Q Consensus 175 ~~~~~-~~-~~~~-~~D~~~~s~~K~l~gp--~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a 249 (297)
...+. .. ..+. .+|++++ +|++++. +.|+++++++ +.+.+...... ...+.+....++
T Consensus 259 g~~g~~~~~~~~~~~~di~t~--sK~l~~G~~~~G~v~~~~~--------------~~~~l~~~~~~-~t~~~~~~~~aa 321 (433)
T 1z7d_A 259 GRTGKLLCVHHYNVKPDVILL--GKALSGGHYPISAVLANDD--------------IMLVIKPGEHG-STYGGNPLAASI 321 (433)
T ss_dssp TTTSSSSGGGGGTCCCSEEEE--CGGGGTTSSCCEEEEECHH--------------HHTTCCTTCCC-CTTTTCHHHHHH
T ss_pred CcCCcchhhHhcCCCCCEEEE--CccccCCCCCeEEEEECHH--------------HHhhhcccccc-ccCCCCHHHHHH
Confidence 22111 00 0001 4788755 5998764 4689998873 33333221111 122345677777
Q ss_pred HHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 250 LAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 250 l~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
..++|+.+.+. .+.++.+++.+++.+.|+++
T Consensus 322 a~aal~~~~~~----~~~~~~~~~~~~l~~~L~~l 352 (433)
T 1z7d_A 322 CVEALNVLINE----KLCENAEKLGGPFLENLKRE 352 (433)
T ss_dssp HHHHHHHHHHT----THHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhc----cHHHHHHHHHHHHHHHHHHH
Confidence 78888877643 35556666677777666543
No 199
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.63 E-value=1.1e-14 Score=133.24 Aligned_cols=216 Identities=12% Similarity=0.019 Sum_probs=131.9
Q ss_pred HHHHHHHHHcCCC-CCCCcceEEecCCh-HHHHHHHHHhcC-CCCeEEEecCCCCCcccccccc------cccccceeee
Q 022463 34 LCQKRALEAFRLD-PEKWGVNVQSLSGS-PSNFQVYTALLK-PHDRIMALDLPHGGHLSHGYQT------DTKKISAVSI 104 (297)
Q Consensus 34 ~~~~~la~~~g~~-~~~~~~~v~~~sG~-~~~~~~~~~~~~-~gd~Vl~~~~~~~~~~~~~~~~------~~~~~~~~g~ 104 (297)
+.+++++++++++ +++ |++++|+ .++..+++.+.. +||+|++.+..+++........ ...+......
T Consensus 90 ~l~~~la~~~~~~~~~~----v~~~~gg~ea~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (419)
T 2eo5_A 90 ELAKKLVTYSPGNFQKK----VFFSNSGTEAIEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMP 165 (419)
T ss_dssp HHHHHHHHHSSCSSCEE----EEEESSHHHHHHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCT
T ss_pred HHHHHHHHhCCCCcCCE----EEEeCchHHHHHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCC
Confidence 3338899999987 543 8887776 577767776533 4899999887665432211100 0001100011
Q ss_pred eeEeeecccCCCCCc----------------CCHHHHH-HHhhh----cCCcEEEEcCCC--CCCccc----HHHHHHHH
Q 022463 105 FFETMPYRLNESTGY----------------IDYDQLE-KSATL----FRPKLIVAGASA--YARLYD----YERIRKVC 157 (297)
Q Consensus 105 ~~~~v~~~~~~~~~~----------------~d~~~l~-~~l~~----~~~~~v~~~~~~--~G~~~~----~~~i~~la 157 (297)
.+..++ .+ +.+. +|+++|+ +.+++ .++++|++++.| +|...+ +++|.++|
T Consensus 166 ~~~~v~--~~-~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~ 242 (419)
T 2eo5_A 166 GVIHVP--YP-NPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLA 242 (419)
T ss_dssp TEEEEC--CC-CSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHH
T ss_pred CCEEEC--CC-ccccccccccccccchhhHHHHHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHH
Confidence 133343 32 2221 4688999 88874 256677776543 587666 89999999
Q ss_pred HhcCCEEEEehhhh-cccccc----cCCCCCCCCccEEEecCCccCCCC-Cc-eEEEEecCchhhccCCccchhhHHHHh
Q 022463 158 NKQKAIMLADMAHI-SGLVAA----GVIPSPFEYADVVTTTTHKSLRGP-RG-AMIFFRKGVKEINKQGKEVFYDYEEKI 230 (297)
Q Consensus 158 ~~~g~~livD~a~~-~g~~~~----~~~~~~~~~~D~~~~s~~K~l~gp-~g-G~i~~~~~~~~~~~~g~~~~~~~~~~~ 230 (297)
++||+++|+|++|+ .|.... ..... ..|++++| |+++++ -. |++++++++ . .+
T Consensus 243 ~~~~~~li~DE~~~~~g~~g~~~~~~~~~~---~~d~~t~s--K~~~~G~~riG~~~~~~~~--------------~-~~ 302 (419)
T 2eo5_A 243 KKYGILLVDDEVQMGLGRTGKLFAIENFNT---VPDVITLA--KALGGGIMPIGATIFRKDL--------------D-FK 302 (419)
T ss_dssp HHHTCEEEEECTTTTTTTTSSSSGGGGGTC---CCSEEEEC--GGGGTTTSCCEEEEEEGGG--------------C-CC
T ss_pred HHcCCEEEEeccccCCccCcchhhHHhcCC---CCCEEEec--ccccCCccceEEEEEchHh--------------h-cC
Confidence 99999999999987 332211 11111 46877554 988764 44 999988842 2 22
Q ss_pred hhcccCCCCCCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 231 NQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 231 ~~~~~~~~~~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
..... .+.+.+.+..+++.++|+.+.+ +.++.+++.+++.+.|+++
T Consensus 303 -~~~~~-~t~~~n~~~~~aa~aal~~~~~------~~~~~~~~~~~l~~~L~~~ 348 (419)
T 2eo5_A 303 -PGMHS-NTFGGNALACAIGSKVIDIVKD------LLPHVNEIGKIFAEELQGL 348 (419)
T ss_dssp --------CCCCCHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHTTS
T ss_pred -CcccC-CCCCCCHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHh
Confidence 10001 1223466777787888876532 6777788888888888776
No 200
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.63 E-value=4.1e-15 Score=134.91 Aligned_cols=217 Identities=15% Similarity=0.118 Sum_probs=132.8
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhcC-------CC-CeEEEecCCCCCcccccccccc
Q 022463 26 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALLK-------PH-DRIMALDLPHGGHLSHGYQTDT 96 (297)
Q Consensus 26 ~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~~-------~g-d~Vl~~~~~~~~~~~~~~~~~~ 96 (297)
+...+++ ++++++++.+. +++++|. .++..++++++. +| |.|++.+..+++..........
T Consensus 81 ~~~~~l~----~~la~~~~~~~------v~~~~gg~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~ 150 (406)
T 4adb_A 81 EPVLRLA----KKLIDATFADR------VFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGG 150 (406)
T ss_dssp HHHHHHH----HHHHHHSSCSE------EEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSS
T ss_pred HHHHHHH----HHHHhhCCCCe------EEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccC
Confidence 3444555 89999998762 6665555 677777777654 55 9999988776665322221111
Q ss_pred cccc---e--eeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEEcCCC-CCCc-----ccHHHHHHHHHhcCCEEE
Q 022463 97 KKIS---A--VSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA-YARL-----YDYERIRKVCNKQKAIML 165 (297)
Q Consensus 97 ~~~~---~--~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~-~G~~-----~~~~~i~~la~~~g~~li 165 (297)
.... + .+..+ ..++ ..|+++|++.+++ ++++|++.++| +|.+ .++++|.++|++||+++|
T Consensus 151 ~~~~~~~~~~~~~~~--~~~~------~~d~~~l~~~l~~-~~~~v~~~p~np~g~~~~~~~~~l~~l~~l~~~~~~~li 221 (406)
T 4adb_A 151 QPAYSQDFAPLPADI--RHAA------YNDINSASALIDD-STCAVIVEPIQGEGGVVPASNAFLQGLRELCNRHNALLI 221 (406)
T ss_dssp CGGGTGGGCSCCSSE--EEEC------TTCHHHHHTTCST-TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEE
T ss_pred CccccccCCCCCCCc--eEeC------CCcHHHHHHHhcC-CeEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 0000 0 00011 1111 1479999999986 89999986555 5533 468899999999999999
Q ss_pred EehhhhcccccccCCCCC---C-CCccEEEecCCccCCCC-CceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCC
Q 022463 166 ADMAHISGLVAAGVIPSP---F-EYADVVTTTTHKSLRGP-RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240 (297)
Q Consensus 166 vD~a~~~g~~~~~~~~~~---~-~~~D~~~~s~~K~l~gp-~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 240 (297)
+|++|+ +....+. ..+ . ...|++++ +|++++. +.|+++.+++ +.+.+..... ....
T Consensus 222 ~De~~~-~~~~~g~-~~~~~~~~~~~d~~t~--sK~~~~G~r~G~~~~~~~--------------~~~~~~~~~~-~~~~ 282 (406)
T 4adb_A 222 FDEVQT-GVGRTGE-LYAYMHYGVTPDLLTT--AKALGGGFPVGALLATEE--------------CARVMTVGTH-GTTY 282 (406)
T ss_dssp EECTTT-TTTTTSS-SSHHHHHTCCCSEEEE--CGGGGTTSCCEEEEECHH--------------HHHTCCTTSS-CCSS
T ss_pred Eecccc-CCCccch-hHHHHhcCCCCCEEEe--chhhcCCCCeEEEEEcHH--------------HHhhhccCCc-CCCC
Confidence 999996 3321111 000 0 14688865 7988643 3488888773 4443333211 1133
Q ss_pred CCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 241 GPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 241 t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
+.+.+..+++.++++.+.. +++.++.+++.+++.+.|+++
T Consensus 283 ~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~l~~~l~~~ 322 (406)
T 4adb_A 283 GGNPLASAVAGKVLELINT----PEMLNGVKQRHDWFVERLNTI 322 (406)
T ss_dssp TTCHHHHHHHHHHHHHHSS----HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHHHH
Confidence 4566777777777876642 556677777777777777654
No 201
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.63 E-value=3.4e-15 Score=135.89 Aligned_cols=232 Identities=9% Similarity=-0.049 Sum_probs=141.6
Q ss_pred CCCchhHHHHHHHHHHHHHHHc-CC-----CCCCCcceEEe--cCCh-HHHHHHH--HHhcCCC-----CeEEEecCCCC
Q 022463 22 YGGNEYIDMAESLCQKRALEAF-RL-----DPEKWGVNVQS--LSGS-PSNFQVY--TALLKPH-----DRIMALDLPHG 85 (297)
Q Consensus 22 ~~~~~~~~~~e~~~~~~la~~~-g~-----~~~~~~~~v~~--~sG~-~~~~~~~--~~~~~~g-----d~Vl~~~~~~~ 85 (297)
|+......+++ +.+++++ +. ++++ |++ ++|+ .++..++ ..++.+| |+|+++..+|+
T Consensus 70 y~~~~g~~~lr----~~la~~~~~~~~~~~~~~~----v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~ 141 (412)
T 1ajs_A 70 YLPILGLAEFR----TCASRLALGDDSPALQEKR----VGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWE 141 (412)
T ss_dssp CCCTTCCHHHH----HHHHHHHHCTTCHHHHTTC----EEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCT
T ss_pred CCCCCCCHHHH----HHHHHHHhcCCCCccCCCc----EEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcH
Confidence 44445567777 5555555 32 4443 777 7776 4665553 3456899 99999998877
Q ss_pred Ccccccccccccccceeeee-eEeeecccCCCCCcCCHHHHHHHhhhc--CCcEEEE-cCCC-CCCccc---HHHHHHHH
Q 022463 86 GHLSHGYQTDTKKISAVSIF-FETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVA-GASA-YARLYD---YERIRKVC 157 (297)
Q Consensus 86 ~~~~~~~~~~~~~~~~~g~~-~~~v~~~~~~~~~~~d~~~l~~~l~~~--~~~~v~~-~~~~-~G~~~~---~~~i~~la 157 (297)
+..... ...|.. +..++...+ +++.+|++++++.+++. +++++++ +++| +|.+.+ +++|.++|
T Consensus 142 ~~~~~~--------~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~ 212 (412)
T 1ajs_A 142 NHNGVF--------TTAGFKDIRSYRYWDT-EKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVM 212 (412)
T ss_dssp HHHHHH--------HHTTCSCEEEEECEET-TTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHH
T ss_pred HHHHHH--------HHcCCceeEEEeeecC-CCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHH
Confidence 754322 222333 333433212 45789999999999863 4556666 6777 787755 55899999
Q ss_pred HhcCCEEEEehhhhccccc--------cc-CCCCCCCCccEEEecCCccCCCCCc---eEEEE---ecCchhhccCCccc
Q 022463 158 NKQKAIMLADMAHISGLVA--------AG-VIPSPFEYADVVTTTTHKSLRGPRG---AMIFF---RKGVKEINKQGKEV 222 (297)
Q Consensus 158 ~~~g~~livD~a~~~g~~~--------~~-~~~~~~~~~D~~~~s~~K~l~gp~g---G~i~~---~~~~~~~~~~g~~~ 222 (297)
++||+++|+|+++...... .. +... ..-++++.|++|.+ |+.| |++++ +++...
T Consensus 213 ~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~-~~~G~riG~~~~~~~~~~~~~-------- 281 (412)
T 1ajs_A 213 KRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSE--GFELFCAQSFSKNF-GLYNERVGNLTVVAKEPDSIL-------- 281 (412)
T ss_dssp HHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHT--TCCEEEEEECTTTS-CCGGGCEEEEEEECSSHHHHH--------
T ss_pred HHCCCEEEEEcccccccCCcccccchHHHHHhcc--CCcEEEEEeccccc-CCCCcceEEEEEecCCHHHHH--------
Confidence 9999999999996532111 11 1000 01248899999977 4444 88888 442100
Q ss_pred hhhHHHHhhhcccCCCCCCCchHHHHHHHHHHHHHh-----hhcChhhHHHHhhhhHHHHHhhccCCC
Q 022463 223 FYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVC-----TLITFSHIHVFSLHVYPAFVSNQNNSE 285 (297)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~-----~~~g~~~~~~~~~~l~~~l~~~l~~~~ 285 (297)
.+.+.+...... ..++++.+..+++.++|+... +. .+++++++.++..+++.+.|+++.
T Consensus 282 --~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~ 345 (412)
T 1ajs_A 282 --RVLSQMQKIVRV-TWSNPPAQGARIVARTLSDPELFHEWTG-NVKTMADRILSMRSELRARLEALK 345 (412)
T ss_dssp --HHHHHHHHHHHT-TTSSCCSHHHHHHHHHHHSHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred --HHHHHHHHHHhc-ccCCCChHHHHHHHHHHcCcchhHHHHH-HHHHHHHHHHHHHHHHHHHHHhhC
Confidence 022222221111 122345566666677776542 23 567788888889999999888764
No 202
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.63 E-value=2.7e-15 Score=135.65 Aligned_cols=232 Identities=12% Similarity=0.057 Sum_probs=138.0
Q ss_pred CCCchhHHHHHHHHHHHHHHHc-CC--CCCCCcceEEe--cCCh-HHHHHHHHHhc--CCCCeEEEecCCCCCccccccc
Q 022463 22 YGGNEYIDMAESLCQKRALEAF-RL--DPEKWGVNVQS--LSGS-PSNFQVYTALL--KPHDRIMALDLPHGGHLSHGYQ 93 (297)
Q Consensus 22 ~~~~~~~~~~e~~~~~~la~~~-g~--~~~~~~~~v~~--~sG~-~~~~~~~~~~~--~~gd~Vl~~~~~~~~~~~~~~~ 93 (297)
|+......+++ +.+++++ +. ++++ |++ ++|+ .++..++..+. .+||+|+++..+|++.....
T Consensus 65 y~~~~g~~~lr----~~la~~~~~~~~~~~~----v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~-- 134 (394)
T 2ay1_A 65 YAGLSGEPEFQ----KAMGELILGDGLKSET----TATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIM-- 134 (394)
T ss_dssp CCCSSCCHHHH----HHHHHHHHGGGCCGGG----EEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHH--
T ss_pred CCCCCCcHHHH----HHHHHHHhCCCCCccc----EEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH--
Confidence 44444557777 5555554 33 4443 776 6666 56665666553 49999999987776654322
Q ss_pred ccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhc--CCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCEEEE
Q 022463 94 TDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVA-GASA-YARLYD---YERIRKVCNKQKAIMLA 166 (297)
Q Consensus 94 ~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~--~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~liv 166 (297)
...|..+..++.+.+ +++.+|++.+++.+++. +++++++ +++| +|.+.| +++|.++|+++|+++|+
T Consensus 135 ------~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~ 207 (394)
T 2ay1_A 135 ------NFMGLPVQTYRYFDA-ETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLI 207 (394)
T ss_dssp ------HHHTCCEEEEECEET-TTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred ------HHcCCceEEEecccc-cCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 222333444443221 35778999999999863 2455665 6777 787775 55789999999999999
Q ss_pred ehhhhccccc-------cc-CCCCCCCCccEEEecCCccCCCCCc---eEEEE---ecCchhhccCCccchhhHHHHhhh
Q 022463 167 DMAHISGLVA-------AG-VIPSPFEYADVVTTTTHKSLRGPRG---AMIFF---RKGVKEINKQGKEVFYDYEEKINQ 232 (297)
Q Consensus 167 D~a~~~g~~~-------~~-~~~~~~~~~D~~~~s~~K~l~gp~g---G~i~~---~~~~~~~~~~g~~~~~~~~~~~~~ 232 (297)
|++|+..... .. +... ..-++++.|++|+++ +.| |++++ +++... .+.+.+..
T Consensus 208 De~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~-~~G~riG~~~~~~~~~~~~~----------~l~~~~~~ 274 (394)
T 2ay1_A 208 DLAYQGFGDGLEEDAAGTRLIASR--IPEVLIAASCSKNFG-IYRERTGCLLALCADAATRE----------LAQGAMAF 274 (394)
T ss_dssp EECCTTSSSCHHHHHHHHHHHHHH--CSSEEEEEECTTTTT-CGGGCEEEEEEECSSHHHHH----------HHHHHHHH
T ss_pred ecCccccccCcccchHHHHHHhhc--CCCEEEEEeccCCCc-CcCCccceEEEEeCCHHHHH----------HHHHHHHH
Confidence 9998753321 11 1111 012466889999874 333 88887 332100 11122221
Q ss_pred cccCCCCCCCchHHHHHHHHHHHHH-----hhhcChhhHHHHhhhhHHHHHhhccCCC
Q 022463 233 AVFPGLQGGPHNHTITGLAVALKQV-----CTLITFSHIHVFSLHVYPAFVSNQNNSE 285 (297)
Q Consensus 233 ~~~~~~~~t~~~~~~~al~~al~~~-----~~~~g~~~~~~~~~~l~~~l~~~l~~~~ 285 (297)
..... .++++.+..+++.++|+.. ... .+++++++.++..+++.+.|+++.
T Consensus 275 ~~~~~-~~~~~~~~~~a~~~~l~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~ 330 (394)
T 2ay1_A 275 LNRQT-YSFPPFHGAKIVSTVLTTPELRADWMA-ELEAVRSGMLRLREQLAGELRDLS 330 (394)
T ss_dssp HHHTT-TSSCCCHHHHHHHHHHHSHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhh-cCCCChHHHHHHHHHhcChHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcC
Confidence 11111 2233555666666666543 123 567788888888888888887653
No 203
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.63 E-value=9.4e-15 Score=132.50 Aligned_cols=177 Identities=11% Similarity=-0.017 Sum_probs=110.5
Q ss_pred CccCCCchhHHHHHHHHHHHHHHHcCC--CCCCCcceEEe--cCCh-HHHHHHHHHh---cCCCCeEEEecCCCCCcccc
Q 022463 19 ARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQS--LSGS-PSNFQVYTAL---LKPHDRIMALDLPHGGHLSH 90 (297)
Q Consensus 19 ~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~~v~~--~sG~-~~~~~~~~~~---~~~gd~Vl~~~~~~~~~~~~ 90 (297)
...|.......++++.+.+++.+.+|. ++++ |++ |+|+ .++..++.++ ++|||+|+++...|.++...
T Consensus 64 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~----i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~ 139 (401)
T 7aat_A 64 DKEYLPIAGLADFTRASAELALGENSEAFKSGR----YVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPI 139 (401)
T ss_dssp CCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTC----EEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHH
T ss_pred ccCCCCCCCCHHHHHHHHHHhcCCCccccccCc----eEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHH
Confidence 344544455678885555555544443 2544 655 7777 4655455444 48999999999877776443
Q ss_pred cccccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhh--cCCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCE
Q 022463 91 GYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL--FRPKLIVA-GASA-YARLYD---YERIRKVCNKQKAI 163 (297)
Q Consensus 91 ~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~--~~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~ 163 (297)
.. ..|..+..+++.. ++++.+|++.+++.+.+ .+++++++ +++| +|.+.+ +++|.++|++||++
T Consensus 140 ~~--------~~g~~~~~~~~~~-~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~ 210 (401)
T 7aat_A 140 FR--------DAGLQLQAYRYYD-PKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLL 210 (401)
T ss_dssp HH--------HTTCEEEEEECEE-TTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCE
T ss_pred HH--------HcCCeeEeeeeec-cccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcE
Confidence 22 2333344444322 24678999988888764 25677777 6777 886554 67888999999999
Q ss_pred EEEehhhhccccc-ccCCCCC------CCCccEEEecCCccCCCC--CceEEEE
Q 022463 164 MLADMAHISGLVA-AGVIPSP------FEYADVVTTTTHKSLRGP--RGAMIFF 208 (297)
Q Consensus 164 livD~a~~~g~~~-~~~~~~~------~~~~D~~~~s~~K~l~gp--~gG~i~~ 208 (297)
+|+|+++...... .+....+ ...-.+++.|++|.++.| +-|+++.
T Consensus 211 li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~ 264 (401)
T 7aat_A 211 AYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTV 264 (401)
T ss_dssp EEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEE
T ss_pred EEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCcccccccCceEEEEE
Confidence 9999997533221 0000000 013457889999987332 2388876
No 204
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.62 E-value=1.2e-14 Score=133.54 Aligned_cols=233 Identities=9% Similarity=-0.001 Sum_probs=125.8
Q ss_pred HHHHHHHHHHHHHcCCCC-CCCcceEEecCC-hHHHHHHHHHh--cCCCCeEEEecCCCCCccccccccccccc------
Q 022463 30 MAESLCQKRALEAFRLDP-EKWGVNVQSLSG-SPSNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKI------ 99 (297)
Q Consensus 30 ~~e~~~~~~la~~~g~~~-~~~~~~v~~~sG-~~~~~~~~~~~--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~------ 99 (297)
+..++.+++++++++... ++ +++++| +.++..+++.+ ..+++.|++.+..+++.............
T Consensus 86 ~~~~~l~~~la~~~~~~~~~~----v~~~~ggsea~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~ 161 (439)
T 3dxv_A 86 APAVTLAERLLASFPGEGTHK----IWFGHSGSDANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAK 161 (439)
T ss_dssp HHHHHHHHHHHHTTTCTTTEE----EEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-----------
T ss_pred HHHHHHHHHHHHhCCCCCCCE----EEEeCCHHHHHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccc
Confidence 344445589999987654 33 555555 46887777764 34666777776655443321111100000
Q ss_pred -ceeeeeeEeeecccCCCCCcC-----CHHHHHHHhh---hcCCcEEEEc-CC-CCCCccc----HHHHHHHHHhcCCEE
Q 022463 100 -SAVSIFFETMPYRLNESTGYI-----DYDQLEKSAT---LFRPKLIVAG-AS-AYARLYD----YERIRKVCNKQKAIM 164 (297)
Q Consensus 100 -~~~g~~~~~v~~~~~~~~~~~-----d~~~l~~~l~---~~~~~~v~~~-~~-~~G~~~~----~~~i~~la~~~g~~l 164 (297)
.-....+..+ +.+ ..... |+++|+++++ ..++++|++. .. +.|...| +++|.++|++||+++
T Consensus 162 ~~~~~~~~~~~--~~~-~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~l 238 (439)
T 3dxv_A 162 ADGLILLPYPD--PYR-PYRNDPTGDAILTLLTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILV 238 (439)
T ss_dssp --CEEEECCCC--SSS-CBTTBTTSHHHHHHHHHHHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEE
T ss_pred cCCCCCCcEEc--CCC-cccccccHHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEE
Confidence 0000001112 222 11111 7899999994 3256777773 22 3577777 999999999999999
Q ss_pred EEehhhhcccccccC-CCCC-C-CCccEEEecCCccCCCC-CceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCC
Q 022463 165 LADMAHISGLVAAGV-IPSP-F-EYADVVTTTTHKSLRGP-RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240 (297)
Q Consensus 165 ivD~a~~~g~~~~~~-~~~~-~-~~~D~~~~s~~K~l~gp-~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 240 (297)
|+|++|+ |....+. .... + ...|++++ +|++++. +.|+++.+++ +.+.+..... ....
T Consensus 239 i~DE~~~-g~g~~g~~~~~~~~~~~~di~s~--sK~~~~G~riG~~~~~~~--------------~~~~~~~~~~-~~t~ 300 (439)
T 3dxv_A 239 VCDEVKV-GLARSGRLHCFEHEGFVPDILVL--GKGLGGGLPLSAVIAPAE--------------ILDCASAFAM-QTLH 300 (439)
T ss_dssp EEECTTT-CTTTTSSSSGGGGTTCCCSEEEE--CGGGGTTSCCEEEEEEHH--------------HHTSCSSSSC-CTTT
T ss_pred EEecccc-CCCcCchhhHHHhcCCCCCEEEE--cchhcCCcceEEEEECHH--------------HHhhhcCCCc-CCCc
Confidence 9999987 3211110 0000 0 14687754 5988652 3389988873 3333322211 1122
Q ss_pred CCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 241 GPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 241 t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
.+...+++..++++.+.+..-.+++++....+.+.+.+.+...+.+.
T Consensus 301 -~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 347 (439)
T 3dxv_A 301 -GNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIG 347 (439)
T ss_dssp -TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEE
T ss_pred -ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 45667777778888776541234444444444444444333344443
No 205
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.62 E-value=1.3e-14 Score=131.98 Aligned_cols=236 Identities=11% Similarity=0.032 Sum_probs=135.5
Q ss_pred CccCCCchhHHHHHHHHHHHHHHHc-CCC-----CCCCcceEE--ecCCh-HHHHH---HHHHhcCCCCeEEEecCCCCC
Q 022463 19 ARYYGGNEYIDMAESLCQKRALEAF-RLD-----PEKWGVNVQ--SLSGS-PSNFQ---VYTALLKPHDRIMALDLPHGG 86 (297)
Q Consensus 19 ~~~~~~~~~~~~~e~~~~~~la~~~-g~~-----~~~~~~~v~--~~sG~-~~~~~---~~~~~~~~gd~Vl~~~~~~~~ 86 (297)
...|+......+++ +.+++++ +.+ +++ +. .++|+ .++.. ++.+++++||+|+++.+.|.+
T Consensus 72 ~~~y~~~~g~~~lr----~~ia~~~~~~~~~~~~~~~----i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~ 143 (409)
T 4eu1_A 72 NMDYAPVTGIASFV----EEAQKLCFGPTCAALRDGR----IASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPN 143 (409)
T ss_dssp CCCCCCTTCCHHHH----HHHHHHHHCSSCHHHHTTC----EEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTH
T ss_pred cccCCCCCCcHHHH----HHHHHHHcCCCchhhccCc----eeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHh
Confidence 34455455667888 4444443 554 333 43 24444 44432 344557899999999877766
Q ss_pred cccccccccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhc--CCcEEEE-cCCC-CCCcccHH---HHHHHHHh
Q 022463 87 HLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVA-GASA-YARLYDYE---RIRKVCNK 159 (297)
Q Consensus 87 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~--~~~~v~~-~~~~-~G~~~~~~---~i~~la~~ 159 (297)
+... +...|..+..+++. +++++.+|++++++.+++. +++++++ +++| +|.+.+.+ +|.++|++
T Consensus 144 ~~~~--------~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~ 214 (409)
T 4eu1_A 144 HESI--------FAKAGMELTPYSYY-DPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKR 214 (409)
T ss_dssp HHHH--------HHHTTCEEEEECCE-ETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred HHHH--------HHHcCCeEEEEEee-cCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHh
Confidence 6432 22334334444332 2256789999999999742 3455555 6777 89887755 59999999
Q ss_pred cCCEEEEehhhhcccccc---------cCCCCCCCCccEEEecCCccCCCCC--ceEE--EEecC-chhhccCCccchhh
Q 022463 160 QKAIMLADMAHISGLVAA---------GVIPSPFEYADVVTTTTHKSLRGPR--GAMI--FFRKG-VKEINKQGKEVFYD 225 (297)
Q Consensus 160 ~g~~livD~a~~~g~~~~---------~~~~~~~~~~D~~~~s~~K~l~gp~--gG~i--~~~~~-~~~~~~~g~~~~~~ 225 (297)
||+++|+|++++...... .+... ..-.+++.|++|.++.|. -|++ ++.++ ... .
T Consensus 215 ~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~----------~ 282 (409)
T 4eu1_A 215 RNHIPFVDMAYQGFATGQLDYDAFVPRHLVDM--VPNLIVAQSFSKNFGLYGHRCGALHISTASAEEAK----------R 282 (409)
T ss_dssp TTCEEEEEESCTTTTTSCHHHHTHHHHHHHTT--SSCCEEEEECTTTSSCGGGCCEEEEEECSSHHHHH----------H
T ss_pred CCcEEEEeccccccccCCcccchHHHHHHHhh--CCcEEEEecCcccccCccCCceEEEEEeCCHHHHH----------H
Confidence 999999999976432211 00010 022367889999874332 2886 44442 100 0
Q ss_pred HHHHhhhcccCCCCCCCchHHHHHHHHHHHHHh-----hhcChhhHHHHhhhhHHHHHhhccCCC
Q 022463 226 YEEKINQAVFPGLQGGPHNHTITGLAVALKQVC-----TLITFSHIHVFSLHVYPAFVSNQNNSE 285 (297)
Q Consensus 226 ~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~-----~~~g~~~~~~~~~~l~~~l~~~l~~~~ 285 (297)
+.+.+....... ..+++.....++..+|+... .. .+++.+++.++..+++.+.|++..
T Consensus 283 l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g 345 (409)
T 4eu1_A 283 LVSQLALLIRPM-YNNPPLYGAWVVSSILKDPQLTALWKK-ELKQMSSRIAEVRKRLVSELKACG 345 (409)
T ss_dssp HHHHHHHHHHHH-HSSCCHHHHHHHHHHHHCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhh-cCCCChHHHHHHHHHhCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcC
Confidence 222222211111 12334455555555555321 12 356777888888888888887753
No 206
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.61 E-value=2.7e-14 Score=132.21 Aligned_cols=233 Identities=12% Similarity=0.048 Sum_probs=133.1
Q ss_pred HHHHHHHHHcCCCCCCCcceEEecC-ChHHHHHHHHHhcC-------CC-CeEEEecCCCCCcccccccc-c-----ccc
Q 022463 34 LCQKRALEAFRLDPEKWGVNVQSLS-GSPSNFQVYTALLK-------PH-DRIMALDLPHGGHLSHGYQT-D-----TKK 98 (297)
Q Consensus 34 ~~~~~la~~~g~~~~~~~~~v~~~s-G~~~~~~~~~~~~~-------~g-d~Vl~~~~~~~~~~~~~~~~-~-----~~~ 98 (297)
+.+++++++++.+.+. +++++ |+.++..+++.+.. +| +.|++.+..+++........ . ...
T Consensus 122 ~L~e~la~~~~~~~~~----v~~~~sGseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 197 (457)
T 3tfu_A 122 RLAKLLVDITPAGLDT----VFFSDSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSL 197 (457)
T ss_dssp HHHHHHHHHSSTTEEE----EEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC------
T ss_pred HHHHHHHHhCCCCcCE----EEEeCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCccccccc
Confidence 3448999999876553 66654 55688877777653 55 47888776655432111100 0 000
Q ss_pred cceeeeeeEeeecccCCCCCcCCHHHHHHHhhh--cCCcEEEEcC--CC-CCCccc----HHHHHHHHHhcCCEEEEehh
Q 022463 99 ISAVSIFFETMPYRLNESTGYIDYDQLEKSATL--FRPKLIVAGA--SA-YARLYD----YERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 99 ~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~--~~~~~v~~~~--~~-~G~~~~----~~~i~~la~~~g~~livD~a 169 (297)
.......+..++++.+ .....|+++|++++++ .++++|++.+ +| .|...| +++|.++|++||+++|+|++
T Consensus 198 ~~~~~~~~~~~~~p~~-~~~~~d~~~le~~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv 276 (457)
T 3tfu_A 198 WTDVLAAQVFAPQVPR-DYDPAYSAAFEAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEI 276 (457)
T ss_dssp ----CCCCEEECCCCS-SCCHHHHHHHHHHHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECT
T ss_pred ccCCCCCceEecCCCc-ccCHHHHHHHHHHHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcC
Confidence 0000001223333332 2233588999999983 2677788744 34 566655 89999999999999999999
Q ss_pred hh-cccccccCCCCC-C-CCccEEEecCCccCCCC--CceEEEEecCchhhccCCccchhhHHHHhhhc---c-cCCCCC
Q 022463 170 HI-SGLVAAGVIPSP-F-EYADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQA---V-FPGLQG 240 (297)
Q Consensus 170 ~~-~g~~~~~~~~~~-~-~~~D~~~~s~~K~l~gp--~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~---~-~~~~~~ 240 (297)
++ .|-... ..... + -..|++++| |.|+|. +.|+++++++ ..+.+... . .-+.+.
T Consensus 277 ~~g~gr~G~-~~a~~~~~~~pdiit~s--K~l~gG~~~lG~v~~~~~--------------i~~~~~~~~~~~~~~~~t~ 339 (457)
T 3tfu_A 277 ATGFGRTGA-LFAADHAGVSPDIMCVG--KALTGGYLSLAATLCTAD--------------VAHTISAGAAGALMHGPTF 339 (457)
T ss_dssp TTTTTTTSS-SSTHHHHTCCCSEEEEC--GGGGTTSSCCEEEEEEHH--------------HHHHHHHSSSCSCCCCCTT
T ss_pred ccCCccccc-hhHhHhcCCCceEEEEC--hhhhCCCcceEEEEEcHH--------------HHHHhhccCCCceeEecCC
Confidence 75 221110 00000 0 046888665 999883 5589998883 44444211 0 111133
Q ss_pred CCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccC---CCCcccccC
Q 022463 241 GPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNN---SENIEEDKG 292 (297)
Q Consensus 241 t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~---~~~~~~~~g 292 (297)
+.+...+++..++|+.+.+. .+.++.+++.+++.+.|++ .+.+.++++
T Consensus 340 ~~n~~a~aaa~aaL~~~~~~----~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~ 390 (457)
T 3tfu_A 340 MANPLACAVSVASVELLLGQ----DWRTRITELAAGLTAGLDTARALPAVTDVRV 390 (457)
T ss_dssp TTCHHHHHHHHHHHHHHHTS----CHHHHHHHHHHHHHHHHGGGGGSTTEEEEEE
T ss_pred CcCHHHHHHHHHHHHHHhhh----HHHHHHHHHHHHHHHHHHHHhcCCCeeeeec
Confidence 45667777888888877644 3445555555666655554 345554443
No 207
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.61 E-value=3.1e-14 Score=131.33 Aligned_cols=233 Identities=9% Similarity=0.025 Sum_probs=128.8
Q ss_pred HHHHHHHHHHcCCCCCCCcceEEecC-ChHHHHHHHHHhcC----C----CCeEEEecCCCCCcccccccccccc-----
Q 022463 33 SLCQKRALEAFRLDPEKWGVNVQSLS-GSPSNFQVYTALLK----P----HDRIMALDLPHGGHLSHGYQTDTKK----- 98 (297)
Q Consensus 33 ~~~~~~la~~~g~~~~~~~~~v~~~s-G~~~~~~~~~~~~~----~----gd~Vl~~~~~~~~~~~~~~~~~~~~----- 98 (297)
++..++++++++.+.+. +++++ |+.++..+++.+.. + +|+|++.+..+++............
T Consensus 90 ~~la~~l~~~~~~~~~~----v~~~~sGseA~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~ 165 (448)
T 3dod_A 90 TQLAETLIDISPKKLTR----VFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHV 165 (448)
T ss_dssp HHHHHHHHHHSCTTEEE----EEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEC----------------------
T ss_pred HHHHHHHHHhCCCCCCE----EEEeCchHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCcccccc
Confidence 33448899998765543 66655 55688878777754 4 4999999877655432111110000
Q ss_pred cceeeeeeEeeecccCCCCCc-----------CCHHHHHHHhh--hcCCcEEEEcC---CCCCCccc----HHHHHHHHH
Q 022463 99 ISAVSIFFETMPYRLNESTGY-----------IDYDQLEKSAT--LFRPKLIVAGA---SAYARLYD----YERIRKVCN 158 (297)
Q Consensus 99 ~~~~g~~~~~v~~~~~~~~~~-----------~d~~~l~~~l~--~~~~~~v~~~~---~~~G~~~~----~~~i~~la~ 158 (297)
..-....+..++ .. +.+. .|+++|+++++ ..++++|++.+ ++.|...+ +++|.++|+
T Consensus 166 ~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~ 242 (448)
T 3dod_A 166 YGPLMFESYKAP--IP-YVYRSESGDPDECRDQCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCT 242 (448)
T ss_dssp -------CEEEC--CC-CCTTSSSCCHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHH
T ss_pred ccCCCCCceEeC--CC-ccccCCccchhhhhHHHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHH
Confidence 000000112222 21 1111 25889999987 22566777743 33565555 899999999
Q ss_pred hcCCEEEEehhhh-ccccc----ccCCCCCCCCccEEEecCCccCCCC--CceEEEEecCchhhccCCccchhhHHHHhh
Q 022463 159 KQKAIMLADMAHI-SGLVA----AGVIPSPFEYADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKIN 231 (297)
Q Consensus 159 ~~g~~livD~a~~-~g~~~----~~~~~~~~~~~D~~~~s~~K~l~gp--~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~ 231 (297)
+||+++|+|++|+ .|... ...... ..|++++| |++++. +.|+++.+++ +.+.+.
T Consensus 243 ~~~~~lI~DEv~~g~g~~g~~~a~~~~~~---~~di~t~s--K~l~~G~~~ig~v~~~~~--------------~~~~~~ 303 (448)
T 3dod_A 243 TYDVLMIVDEVATGFGRTGKMFACEHENV---QPDLMAAG--KGITGGYLPIAVTFATED--------------IYKAFY 303 (448)
T ss_dssp HTTCEEEEECTTTTTTTTSSSSGGGGGTC---CCSEEEEC--GGGGTTSSCCEEEEEEHH--------------HHHTTC
T ss_pred HhCCEEEEeccccCCCcccchhhhhhcCC---CCCEEEec--ccccCCcCceEEEEECHH--------------HHHHhh
Confidence 9999999999987 22111 111111 46877765 998664 3388888883 444443
Q ss_pred hc------ccCCCCCCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcccccC
Q 022463 232 QA------VFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIEEDKG 292 (297)
Q Consensus 232 ~~------~~~~~~~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~~~g 292 (297)
.. .......+.+.+..++..++|+.+.+..-.+++++....+.+.+.+ +...+.+...+|
T Consensus 304 ~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~-l~~~~~~~~~~~ 369 (448)
T 3dod_A 304 DDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQD-LHALPHVGDIRQ 369 (448)
T ss_dssp SCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH-HTTSTTEEEEEE
T ss_pred hccccCCcccccCCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH-HhcCCCeEEEEe
Confidence 20 1111133446677778888888776541245556666666666666 656665554433
No 208
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.61 E-value=7.4e-15 Score=135.91 Aligned_cols=236 Identities=11% Similarity=0.059 Sum_probs=136.6
Q ss_pred HHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhcC--------CCCeEEEecCCCCCccccccccc------
Q 022463 31 AESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALLK--------PHDRIMALDLPHGGHLSHGYQTD------ 95 (297)
Q Consensus 31 ~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~~--------~gd~Vl~~~~~~~~~~~~~~~~~------ 95 (297)
..++.+++++++++.+.+. +++++|. .++..+++.+.. +++.|++.+..+++.........
T Consensus 95 ~~~~la~~l~~~~~~~~~~----v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 170 (459)
T 4a6r_A 95 AVVELSSLLAEVTPAGFDR----VFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMH 170 (459)
T ss_dssp HHHHHHHHHHHHSCTTCCE----EEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC
T ss_pred HHHHHHHHHHHhCCCCCCE----EEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhc
Confidence 3344448999999876654 6776655 688878777754 57899998877665431110000
Q ss_pred -ccccceeeeeeEeeeccc--CCCCCcCC--------HHHHHHHhhh---cCCcEEEEcCCC--CCCccc----HHHHHH
Q 022463 96 -TKKISAVSIFFETMPYRL--NESTGYID--------YDQLEKSATL---FRPKLIVAGASA--YARLYD----YERIRK 155 (297)
Q Consensus 96 -~~~~~~~g~~~~~v~~~~--~~~~~~~d--------~~~l~~~l~~---~~~~~v~~~~~~--~G~~~~----~~~i~~ 155 (297)
.......+ +..++++. ...+. +| +++|++.+++ .++++|++.+.+ .|...+ +++|.+
T Consensus 171 ~~~~~~~~~--~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~ 247 (459)
T 4a6r_A 171 EQGDLPIPG--MAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIER 247 (459)
T ss_dssp ---CCSCSS--EEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHH
T ss_pred cccCCCCCC--CEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHH
Confidence 00011111 22333222 10111 34 7889998873 256677774333 456666 899999
Q ss_pred HHHhcCCEEEEehhhh-ccccc----ccCCCCCCCCccEEEecCCccCCCC--CceEEEEecCchhhccCCccchhhHHH
Q 022463 156 VCNKQKAIMLADMAHI-SGLVA----AGVIPSPFEYADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEE 228 (297)
Q Consensus 156 la~~~g~~livD~a~~-~g~~~----~~~~~~~~~~~D~~~~s~~K~l~gp--~gG~i~~~~~~~~~~~~g~~~~~~~~~ 228 (297)
+|++||+++|+|++|+ .|-.. ...... ..|++++| |+|++. +-|+++++++ +.+
T Consensus 248 l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~---~pdi~t~s--K~l~gg~~~lg~v~~~~~--------------i~~ 308 (459)
T 4a6r_A 248 ICRKYDVLLVADEVICGFGRTGEWFGHQHFGF---QPDLFTAA--KGLSSGYLPIGAVFVGKR--------------VAE 308 (459)
T ss_dssp HHHHTTCEEEEECTTTTTTTTSSSSHHHHHTC---CCSEEEEC--GGGGTTSSCCEEEEECHH--------------HHH
T ss_pred HHHHcCCEEEEeccccCCCcccccchHhhcCC---CCCeeehh--hhhcCCCCCccceeeCHH--------------HHH
Confidence 9999999999999986 22111 000011 46888776 998763 3388888874 333
Q ss_pred Hhhhc--ccCCCCCCCchHHHHHHHHHHHHHhhhcChhhHH-HHhhhhHHHHHhhccCCCCcccccC
Q 022463 229 KINQA--VFPGLQGGPHNHTITGLAVALKQVCTLITFSHIH-VFSLHVYPAFVSNQNNSENIEEDKG 292 (297)
Q Consensus 229 ~~~~~--~~~~~~~t~~~~~~~al~~al~~~~~~~g~~~~~-~~~~~l~~~l~~~l~~~~~~~~~~g 292 (297)
.+... .....+.+.+....++..++|+.+.+..-+++++ ++...+.+.+.+.|++.+.+..++|
T Consensus 309 ~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 375 (459)
T 4a6r_A 309 GLIAGGDFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETFSRFEHVDDVRG 375 (459)
T ss_dssp HHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHHHHTTCTTEEEEEE
T ss_pred HhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 33311 0000022345577777788888776552345555 5555666666566666666655443
No 209
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.60 E-value=5.6e-14 Score=128.89 Aligned_cols=214 Identities=11% Similarity=0.045 Sum_probs=120.7
Q ss_pred HHHHHHcCCCCCCCcceEEecC-ChHHHHHHHHHhcC--CCCeEEEecCCCCCccccccccccccccee------ee---
Q 022463 37 KRALEAFRLDPEKWGVNVQSLS-GSPSNFQVYTALLK--PHDRIMALDLPHGGHLSHGYQTDTKKISAV------SI--- 104 (297)
Q Consensus 37 ~~la~~~g~~~~~~~~~v~~~s-G~~~~~~~~~~~~~--~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~------g~--- 104 (297)
++++++++ +.++ +++++ |+.++..+++.+.. ++++|++.+..|++...........+.... +.
T Consensus 102 ~~la~~~~-~~~~----v~~~~sGsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~ 176 (434)
T 3l44_A 102 KMLKEAMP-ALDK----VRFVNSGTEAVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQS 176 (434)
T ss_dssp HHHHHHCT-TCSE----EEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHH
T ss_pred HHHHHhCC-CCCE----EEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCc
Confidence 78888887 4443 66655 55688777776643 788999988776554322111100000000 00
Q ss_pred -eeEeeecccCCCCCcCCHHHHHHHhhh--cCCcEEEEcCCC--CCCccc----HHHHHHHHHhcCCEEEEehhhhcccc
Q 022463 105 -FFETMPYRLNESTGYIDYDQLEKSATL--FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLV 175 (297)
Q Consensus 105 -~~~~v~~~~~~~~~~~d~~~l~~~l~~--~~~~~v~~~~~~--~G~~~~----~~~i~~la~~~g~~livD~a~~~g~~ 175 (297)
....+.++. .|+++|++++++ .++++|++.+.| .|...| +++|.++|++||+++|+|++|+. +
T Consensus 177 ~~~~~~~~~~------~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g-~- 248 (434)
T 3l44_A 177 IAQEVITVPF------NNVETLKEALDKWGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITA-F- 248 (434)
T ss_dssp HHTTEEEECT------TCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTT-T-
T ss_pred CCCceEecCc------ccHHHHHHHHHhCCCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccc-e-
Confidence 000011111 189999999974 256677775433 466776 99999999999999999999852 2
Q ss_pred cccCCC-CC-CC-CccEEEecCCccCCCCCc-eEEEEecCchhhccCCccchhhHHHHhhhcc--cCCCCCCCchHHHHH
Q 022463 176 AAGVIP-SP-FE-YADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAV--FPGLQGGPHNHTITG 249 (297)
Q Consensus 176 ~~~~~~-~~-~~-~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~t~~~~~~~a 249 (297)
..+... .. +. ..|++++| |.++++-. |+++++++ +.+.+.... ....+.+.+....++
T Consensus 249 ~~g~~~~~~~~~~~~di~t~s--K~~~~G~~iG~~~~~~~--------------i~~~~~~~~~~~~~~t~~~~~~a~aa 312 (434)
T 3l44_A 249 RFMYGGAQDLLGVTPDLTALG--KVIGGGLPIGAYGGKKE--------------IMEQVAPLGPAYQAGTMAGNPASMAS 312 (434)
T ss_dssp TSSSSCHHHHHTCCCSEEEEE--GGGGTTSSCEEEEECHH--------------HHTTBTTTSSBCCCCTTTTCHHHHHH
T ss_pred eccccHHHHHcCCCCCeeehh--hhhcCCcCeeeEEEcHH--------------HHHhhccCCCcccCCCCCcCHHHHHH
Confidence 111000 00 00 46877766 98865444 88888773 333333210 111133456677778
Q ss_pred HHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccC
Q 022463 250 LAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNN 283 (297)
Q Consensus 250 l~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~ 283 (297)
..++|+.+.+. .+.++.+++.+++.+.|++
T Consensus 313 a~aal~~~~~~----~~~~~~~~~~~~l~~~L~~ 342 (434)
T 3l44_A 313 GIACLEVLQQE----GLYEKLDELGATLEKGILE 342 (434)
T ss_dssp HHHHHHHHTST----THHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcc----cHHHHHHHHHHHHHHHHHH
Confidence 78888877543 3444444444444444443
No 210
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.60 E-value=2e-14 Score=132.29 Aligned_cols=219 Identities=12% Similarity=0.081 Sum_probs=131.6
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEec-CChHHHHHHHHHhc---------CCC-CeEEEecCCCCCcccccccc
Q 022463 26 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSL-SGSPSNFQVYTALL---------KPH-DRIMALDLPHGGHLSHGYQT 94 (297)
Q Consensus 26 ~~~~~~e~~~~~~la~~~g~~~~~~~~~v~~~-sG~~~~~~~~~~~~---------~~g-d~Vl~~~~~~~~~~~~~~~~ 94 (297)
+...+++ +++++++|.+. ++++ +|+.++..+++.+. .+| |.|++.+..+++........
T Consensus 118 ~~~~~l~----~~la~~~g~~~------v~~~~sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~ 187 (439)
T 2oat_A 118 NVLGEYE----EYITKLFNYHK------VLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISS 187 (439)
T ss_dssp SSHHHHH----HHHHHHHTCSE------EEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTT
T ss_pred HHHHHHH----HHHHHhcCCCE------EEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhc
Confidence 3445555 78888887432 5555 55578877777653 367 89999887665543211111
Q ss_pred -cc----cccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEEcCCC--CCCcc----cHHHHHHHHHhcCCE
Q 022463 95 -DT----KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA--YARLY----DYERIRKVCNKQKAI 163 (297)
Q Consensus 95 -~~----~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~--~G~~~----~~~~i~~la~~~g~~ 163 (297)
.. .+..-....+..+ +. .|++++++.++..++++|++.+.+ +|... ++++|.++|++||++
T Consensus 188 ~g~~~~~~~~~p~~~~v~~~--~~------~d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gil 259 (439)
T 2oat_A 188 STDPTSYDGFGPFMPGFDII--PY------NDLPALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVL 259 (439)
T ss_dssp CCCHHHHTTSCSCCTTEEEE--CS------SCHHHHHHHTTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCE
T ss_pred CCChhcccCCCCCCCCeEEe--CC------CCHHHHHHHhCCCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 10 0000000012222 22 289999999953367788874332 57655 799999999999999
Q ss_pred EEEehhhhcccccccC-CC-CCCC-CccEEEecCCccCCCC--CceEEEEecCchhhccCCccchhhHHHHhhhcccCCC
Q 022463 164 MLADMAHISGLVAAGV-IP-SPFE-YADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGL 238 (297)
Q Consensus 164 livD~a~~~g~~~~~~-~~-~~~~-~~D~~~~s~~K~l~gp--~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 238 (297)
+|+|++|+ |....+. .. ..+. .+|++++ +|++++. ++|+++++++ +.+.+...... .
T Consensus 260 lI~DEv~~-g~g~~g~~~~~~~~~~~~Di~t~--sK~l~~G~~~~G~v~~~~~--------------~~~~l~~~~~~-~ 321 (439)
T 2oat_A 260 FIADEIQT-GLARTGRWLAVDYENVRPDIVLL--GKALSGGLYPVSAVLCDDD--------------IMLTIKPGEHG-S 321 (439)
T ss_dssp EEEECTTT-TTTTTSSSSGGGGGTCCCSEEEE--CGGGGTTSSCCEEEEECHH--------------HHTTSCTTSSC-C
T ss_pred EEEecccc-CCccCCcchhHHHhCCCCcEEEe--cccccCCCCCeEEEEECHH--------------HHhccCCCCcc-c
Confidence 99999994 4322111 00 0001 4687744 5998774 4699998873 33333221111 1
Q ss_pred CCCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 239 QGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 239 ~~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
..+.+....++..++|+.+.+. .+.++.+++.+++.+.|+++
T Consensus 322 t~~~~~~~~aaa~aal~~~~~~----~~~~~~~~~~~~l~~~L~~l 363 (439)
T 2oat_A 322 TYGGNPLGCRVAIAALEVLEEE----NLAENADKLGIILRNELMKL 363 (439)
T ss_dssp SSTTCHHHHHHHHHHHHHHHHT----THHHHHHHHHHHHHHHHTTS
T ss_pred CCCcCHHHHHHHHHHHHHHhhh----hHHHHHHHHHHHHHHHHHHh
Confidence 2234567777778888877643 46677788888888888876
No 211
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.60 E-value=8.7e-15 Score=132.35 Aligned_cols=232 Identities=11% Similarity=0.064 Sum_probs=136.0
Q ss_pred CCCchhHHHHHHHHHHHHHHHc---C---CCCCCCcceEEe--cCCh-HHHHHHHHHh--cCCCCeEEEecCCCCCcccc
Q 022463 22 YGGNEYIDMAESLCQKRALEAF---R---LDPEKWGVNVQS--LSGS-PSNFQVYTAL--LKPHDRIMALDLPHGGHLSH 90 (297)
Q Consensus 22 ~~~~~~~~~~e~~~~~~la~~~---g---~~~~~~~~~v~~--~sG~-~~~~~~~~~~--~~~gd~Vl~~~~~~~~~~~~ 90 (297)
|+......+++ +.+++++ + +++++ |++ ++|+ .++..++..+ +.+||+|+++...|++....
T Consensus 65 y~~~~g~~~lr----~~la~~~~~~~~~~~~~~~----v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~ 136 (396)
T 2q7w_A 65 YLGIDGIPEFG----RCTQELLFGKGSALINDKR----ARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSV 136 (396)
T ss_dssp CCCTTCCHHHH----HHHHHHHHCTTCHHHHTTC----EEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHH
T ss_pred CCCCCCCHHHH----HHHHHHHhcCCCCcccccc----EEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHH
Confidence 43344567777 5555554 2 23443 665 6666 5666566544 47999999999877776432
Q ss_pred cccccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhc--CCcEEEE-cCCC-CCCccc---HHHHHHHHHhcCCE
Q 022463 91 GYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVA-GASA-YARLYD---YERIRKVCNKQKAI 163 (297)
Q Consensus 91 ~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~--~~~~v~~-~~~~-~G~~~~---~~~i~~la~~~g~~ 163 (297)
. ...|..+..++...+ +++.+|++++++.+++. +++++++ +++| +|.+.+ +++|.++|++||++
T Consensus 137 ~--------~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~ 207 (396)
T 2q7w_A 137 F--------NSAGLEVREYAYYDA-ENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWL 207 (396)
T ss_dssp H--------HHTTCEEEEEECEET-TTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCE
T ss_pred H--------HHcCCceEEEecccC-CCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCE
Confidence 2 222333434433211 35789999999999753 3556666 6777 787765 55799999999999
Q ss_pred EEEehhhhccccc-------cc-CCCCCCCCccEEEecCCccCCCCCc---eEEEE---ecCchhhccCCccchhhHHHH
Q 022463 164 MLADMAHISGLVA-------AG-VIPSPFEYADVVTTTTHKSLRGPRG---AMIFF---RKGVKEINKQGKEVFYDYEEK 229 (297)
Q Consensus 164 livD~a~~~g~~~-------~~-~~~~~~~~~D~~~~s~~K~l~gp~g---G~i~~---~~~~~~~~~~g~~~~~~~~~~ 229 (297)
+|+|++++..... .. +... ...++++.|++|++ |+.| |++++ +++... .+.+.
T Consensus 208 li~De~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~-~~~G~riG~~~~~~~~~~~~~----------~~~~~ 274 (396)
T 2q7w_A 208 PLFDFAYQGFARGLEEDAEGLRAFAAM--HKELIVASSYSXNF-GLYNERVGACTLVAADSETVD----------RAFSQ 274 (396)
T ss_dssp EEEEESCTTSSSCHHHHTHHHHHHHHH--CSCEEEEEECTTTT-TCGGGCCEEEEEECSSHHHHH----------HHHHH
T ss_pred EEEecccccccCCccchhHHHHHHHhc--CCcEEEEEeccccc-cccccccceEEEEcCCHHHHH----------HHHHH
Confidence 9999997643221 11 1000 02357789999987 4334 88886 331100 12222
Q ss_pred hhhcccCCCCCCCchHHHHHHHHHHHHH-----hhhcChhhHHHHhhhhHHHHHhhccCCC
Q 022463 230 INQAVFPGLQGGPHNHTITGLAVALKQV-----CTLITFSHIHVFSLHVYPAFVSNQNNSE 285 (297)
Q Consensus 230 ~~~~~~~~~~~t~~~~~~~al~~al~~~-----~~~~g~~~~~~~~~~l~~~l~~~l~~~~ 285 (297)
+...... ..++++.+...++.++|+.. ... .+++++++.++..+++.+.|++..
T Consensus 275 ~~~~~~~-~~~~~~~~~~~a~~~~l~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~ 333 (396)
T 2q7w_A 275 MKAAIRA-NYSNPPAHGASVVATILSNDALRAIWEQ-ELTDMRQRIQRMRQLFVNTLQEKG 333 (396)
T ss_dssp HHHHHHT-TTSSCCHHHHHHHHHHHTSHHHHHHHHH-HHHHC-CHHHHHHHHHHHHHHHTT
T ss_pred HHHHHhh-ccCCCCcHHHHHHHHHhcChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcC
Confidence 2221111 12334556666656665432 112 456677777778888888887764
No 212
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.58 E-value=2.5e-14 Score=129.59 Aligned_cols=214 Identities=13% Similarity=0.049 Sum_probs=129.1
Q ss_pred HHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhcC------C-CCeEEEecCCCCCccc-ccccccccccceee
Q 022463 33 SLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALLK------P-HDRIMALDLPHGGHLS-HGYQTDTKKISAVS 103 (297)
Q Consensus 33 ~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~~------~-gd~Vl~~~~~~~~~~~-~~~~~~~~~~~~~g 103 (297)
++.++++++++|.+ + +++++|. +++..++.++.. + ++.|++.+..+++... ........... .+
T Consensus 85 ~~l~~~la~~~g~~--~----v~~~~gg~~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~-~~ 157 (397)
T 2ord_A 85 MELAELLSKNTFGG--K----VFFANTGTEANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQ-KP 157 (397)
T ss_dssp HHHHHHHHHTTTSC--E----EEEESSHHHHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHH-GG
T ss_pred HHHHHHHHHhcCCC--e----EEEeCCHHHHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhc-cc
Confidence 33448899999843 2 6665554 677767776642 4 5788888766544332 11111111000 00
Q ss_pred ee---eEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCC----cccHHHHHHHHHhcCCEEEEehhhhccc
Q 022463 104 IF---FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YAR----LYDYERIRKVCNKQKAIMLADMAHISGL 174 (297)
Q Consensus 104 ~~---~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~----~~~~~~i~~la~~~g~~livD~a~~~g~ 174 (297)
.. ...+.++. .|++++++.+++ ++++|++ +++| +|. ..++++|.++|++||+++|+|++|+ |.
T Consensus 158 ~~p~~~~~~~~~~------~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~ 229 (397)
T 2ord_A 158 FEPLVPGFEYFEF------NNVEDLRRKMSE-DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQC-GM 229 (397)
T ss_dssp GCSCCTTEEEECT------TCHHHHHHHCCT-TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTT-TT
T ss_pred cCCCCCCeeEecC------CCHHHHHHHhhc-CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc-CC
Confidence 00 00122222 389999999986 8999999 5666 687 3578899999999999999999996 43
Q ss_pred ccccCCCCCC---C-CccEEEecCCccCCCCCc-eEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHH
Q 022463 175 VAAGVIPSPF---E-YADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITG 249 (297)
Q Consensus 175 ~~~~~~~~~~---~-~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a 249 (297)
...+. ..++ . .+|++++ +|+++++.. |+++++++.. .+.... .....+.+....++
T Consensus 230 ~~~g~-~~~~~~~~~~~d~~s~--sK~~~~G~r~G~~~~~~~~~---------------~l~~~~-~~~~~~~~~~~~~a 290 (397)
T 2ord_A 230 GRTGK-LFAYQKYGVVPDVLTT--AKGLGGGVPIGAVIVNERAN---------------VLEPGD-HGTTFGGNPLACRA 290 (397)
T ss_dssp TTTSS-SSHHHHHTCCCSEEEE--CGGGGTTSCCEEEEECSTTC---------------CCCTTS-SCCSSTTCHHHHHH
T ss_pred ccCcc-chhhhhhCCCCCeeee--ccccCCCcCeEEEEEchHhc---------------ccCCCC-cCCCCCCCHHHHHH
Confidence 32211 1100 1 3687755 699975444 8888887531 121110 11122456677777
Q ss_pred HHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 250 LAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 250 l~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
+.++|+.+.+ +++.++.+++.+++.+.|+++
T Consensus 291 ~~~~l~~~~~----~~~~~~~~~~~~~l~~~L~~~ 321 (397)
T 2ord_A 291 GVTVIKELTK----EGFLEEVEEKGNYLMKKLQEM 321 (397)
T ss_dssp HHHHHHHHTS----TTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh----CCHHHHHHHHHHHHHHHHHHH
Confidence 7788887653 456677777777777777654
No 213
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.58 E-value=3.7e-13 Score=125.14 Aligned_cols=233 Identities=10% Similarity=0.033 Sum_probs=130.3
Q ss_pred HHHHHHHHHcCCCCCCCcceEEec-CChHHHHHHHHHhc--------CCCCeEEEecCCCCCcccccccccc-------c
Q 022463 34 LCQKRALEAFRLDPEKWGVNVQSL-SGSPSNFQVYTALL--------KPHDRIMALDLPHGGHLSHGYQTDT-------K 97 (297)
Q Consensus 34 ~~~~~la~~~g~~~~~~~~~v~~~-sG~~~~~~~~~~~~--------~~gd~Vl~~~~~~~~~~~~~~~~~~-------~ 97 (297)
+..++++++++.+.+. ++++ +|+.++..+++.+. ..++.|++.+..+++.......... .
T Consensus 101 ~la~~l~~~~~~~~~~----v~~~~sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~ 176 (476)
T 3i5t_A 101 RLAEKIATLTPGDLNR----IFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNF 176 (476)
T ss_dssp HHHHHHHTTSSTTCCE----EEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTS
T ss_pred HHHHHHHhcCCCCcCE----EEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhcccc
Confidence 3338899998766553 5555 45578887777764 3467899888776554311110000 0
Q ss_pred ccceeeeeeEeeecccCCCCCcCC--------HHHHHHHhhh---cCCcEEEEc-CCC-CCCccc----HHHHHHHHHhc
Q 022463 98 KISAVSIFFETMPYRLNESTGYID--------YDQLEKSATL---FRPKLIVAG-ASA-YARLYD----YERIRKVCNKQ 160 (297)
Q Consensus 98 ~~~~~g~~~~~v~~~~~~~~~~~d--------~~~l~~~l~~---~~~~~v~~~-~~~-~G~~~~----~~~i~~la~~~ 160 (297)
.....+ +..++.+........| +++|++.+++ .++++|++. ..+ .|...+ +++|.++|++|
T Consensus 177 ~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~ 254 (476)
T 3i5t_A 177 DIAQDR--ISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKH 254 (476)
T ss_dssp CCCCTT--EEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHT
T ss_pred CCCCCC--cEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHc
Confidence 011112 2223322210111112 7889998874 256777774 333 455444 89999999999
Q ss_pred CCEEEEehhhh-ccccc----cc-CCCCCCCCccEEEecCCccCCCC--CceEEEEecCchhhccCCccchhhHHHHhhh
Q 022463 161 KAIMLADMAHI-SGLVA----AG-VIPSPFEYADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQ 232 (297)
Q Consensus 161 g~~livD~a~~-~g~~~----~~-~~~~~~~~~D~~~~s~~K~l~gp--~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~ 232 (297)
|+++|+|++|+ .|-.. .. .... ..|++++| |+|++. +-|+++++++ +.+.+..
T Consensus 255 gillI~DEv~~g~gr~G~~~~~~~~~~v---~pdi~t~s--K~l~~G~~plg~v~~~~~--------------i~~~~~~ 315 (476)
T 3i5t_A 255 DILYISDEVVTGFGRCGEWFASEKVFGV---VPDIITFA--KGVTSGYVPLGGLAISEA--------------VLARISG 315 (476)
T ss_dssp TCEEEEECTTTTTTTTSSSCHHHHTTCC---CCSEEEEC--GGGGTTSSCCEEEEECHH--------------HHHTTSG
T ss_pred CCEEEEEecccCCccccCceeeecccCC---Ccchhhhh--hhhcCCCcCeEEEEECHH--------------HHHHHhc
Confidence 99999999986 22111 11 1111 46888776 998763 3388888873 4444433
Q ss_pred cc------cCCCCCCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcccccC
Q 022463 233 AV------FPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIEEDKG 292 (297)
Q Consensus 233 ~~------~~~~~~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~~~g 292 (297)
.. .-+.+.+.+...+++..++|+.+.+..-.+++++....+.+.+. .|.+.+.+.+++|
T Consensus 316 ~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~L~-~l~~~~~v~~v~~ 380 (476)
T 3i5t_A 316 ENAKGSWFTNGYTYSNQPVACAAALANIELMEREGIVDQAREMADYFAAALA-SLRDLPGVAETRS 380 (476)
T ss_dssp GGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH-TTTTSTTEEEEEE
T ss_pred CCcccccccccCCCCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH-HHhcCCCeEEEEe
Confidence 21 11113345667788888889887654123334444444444443 3444455555544
No 214
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.57 E-value=1.3e-14 Score=132.73 Aligned_cols=216 Identities=13% Similarity=0.126 Sum_probs=127.2
Q ss_pred HHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhcC-------CC-CeEEEecCCCCCcccccccc-cccccc--
Q 022463 33 SLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALLK-------PH-DRIMALDLPHGGHLSHGYQT-DTKKIS-- 100 (297)
Q Consensus 33 ~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~~-------~g-d~Vl~~~~~~~~~~~~~~~~-~~~~~~-- 100 (297)
++.++++++++|.+ + +++++|. .++..+++++.. +| ++|++.+..+++........ ......
T Consensus 102 ~~l~~~la~~~g~~--~----v~~~~ggteA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~ 175 (420)
T 2pb2_A 102 LRLGRKLIDATFAE--R----VLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDG 175 (420)
T ss_dssp HHHHHHHHHHSSCS--E----EEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTT
T ss_pred HHHHHHHHhhCCCC--e----EEEeCCHHHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCcccccc
Confidence 33448899999853 2 6665554 688777777654 67 58998887665543221111 100000
Q ss_pred eeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEEc-CCCC-CC----cccHHHHHHHHHhcCCEEEEehhhhccc
Q 022463 101 AVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASAY-AR----LYDYERIRKVCNKQKAIMLADMAHISGL 174 (297)
Q Consensus 101 ~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~-~~~~-G~----~~~~~~i~~la~~~g~~livD~a~~~g~ 174 (297)
+.-.......++. .|+++|++++++ ++++|++. .+|. |. ..++++|.++|++||+++|+|++|+ |.
T Consensus 176 ~~p~~~~~~~~~~------~d~~~le~~i~~-~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~-g~ 247 (420)
T 2pb2_A 176 FGPKPADIIHVPF------NDLHAVKAVMDD-HTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQC-GM 247 (420)
T ss_dssp SSSCCSCEEEECT------TCHHHHHHHCCT-TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTT-TT
T ss_pred CCCCCCCeEEecC------CCHHHHHHHhcc-CceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCc-Cc
Confidence 0000000111121 389999999986 88999883 4444 43 3578899999999999999999994 43
Q ss_pred ccccCCCCC---CC-CccEEEecCCccCCCCCc-eEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHH
Q 022463 175 VAAGVIPSP---FE-YADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITG 249 (297)
Q Consensus 175 ~~~~~~~~~---~~-~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a 249 (297)
...+. ... +. ..|++++ +|+++++.. |+++++++ +.+.+.... .....+.+....++
T Consensus 248 ~~~g~-~~~~~~~~~~~diit~--sK~l~~G~~iG~~~~~~~--------------l~~~l~~~~-~~~t~~~~~~~~aa 309 (420)
T 2pb2_A 248 GRTGD-LFAYMHYGVTPDILTS--AKALGGGFPVSAMLTTQE--------------IASAFHVGS-HGSTYGGNPLACAV 309 (420)
T ss_dssp TTTSS-SSHHHHHTCCCSEEEE--CGGGGTTSCCEEEEECHH--------------HHTTCC-----CCEECCCHHHHHH
T ss_pred ccCCc-HHHHHhcCCCCCeEEe--cccccCCCceEEEEEhHH--------------HHHhhcCCC-cCcccCcCHHHHHH
Confidence 22111 000 01 4688765 599975433 88888773 222222110 01122345677777
Q ss_pred HHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 250 LAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 250 l~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
+.++|+.+.+ +.+.++.+++.+++.+.|+++
T Consensus 310 ~~a~L~~~~~----~~~~~~~~~~~~~l~~~L~~~ 340 (420)
T 2pb2_A 310 AGAAFDIINT----PEVLQGIHTKRQQFVQHLQAI 340 (420)
T ss_dssp HHHHHHHHSS----HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh----ccHHHHHHHHHHHHHHHHHHH
Confidence 7788887653 356667777777777777654
No 215
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.57 E-value=5.2e-14 Score=130.76 Aligned_cols=233 Identities=14% Similarity=0.088 Sum_probs=131.2
Q ss_pred HHHHHHHHHHcCCCCCCCcceEEecC-ChHHHHHHHHHhcC--------CCCeEEEecCCCCCccccccccccc-----c
Q 022463 33 SLCQKRALEAFRLDPEKWGVNVQSLS-GSPSNFQVYTALLK--------PHDRIMALDLPHGGHLSHGYQTDTK-----K 98 (297)
Q Consensus 33 ~~~~~~la~~~g~~~~~~~~~v~~~s-G~~~~~~~~~~~~~--------~gd~Vl~~~~~~~~~~~~~~~~~~~-----~ 98 (297)
.+..++++++++.+.+. +++++ |+.++..+++.+.. +++.|++.+..+++........... .
T Consensus 102 ~~lae~l~~~~~~~~~~----v~~~~sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~ 177 (472)
T 3hmu_A 102 IALAQKLAELAPGDLNH----VFFAGGGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQ 177 (472)
T ss_dssp HHHHHHHHHHSCTTEEE----EEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHT
T ss_pred HHHHHHHHHhCCCCCCE----EEEeCCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccc
Confidence 33448888998766543 66654 55788877777653 5678888877755432111100000 0
Q ss_pred c-ceeeeeeEeeeccc--CCCCCcCC--------HHHHHHHhhh---cCCcEEEEcCC-C-CCCccc----HHHHHHHHH
Q 022463 99 I-SAVSIFFETMPYRL--NESTGYID--------YDQLEKSATL---FRPKLIVAGAS-A-YARLYD----YERIRKVCN 158 (297)
Q Consensus 99 ~-~~~g~~~~~v~~~~--~~~~~~~d--------~~~l~~~l~~---~~~~~v~~~~~-~-~G~~~~----~~~i~~la~ 158 (297)
. ...+ +..++.+. ...++ .| +++|++.+++ .++++|++.+. + .|...| +++|.++|+
T Consensus 178 ~~~~~~--~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~ 254 (472)
T 3hmu_A 178 SGLIPD--VHHINQPNWWAEGGD-MDPEEFGLARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICD 254 (472)
T ss_dssp TCCCSS--EEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHH
T ss_pred cCCCCC--cEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHH
Confidence 0 0111 22333222 10011 33 7888888873 25667777433 3 466666 899999999
Q ss_pred hcCCEEEEehhhh-ccccc----ccCCCCCCCCccEEEecCCccCCCC--CceEEEEecCchhhccCCccchhhHHHHhh
Q 022463 159 KQKAIMLADMAHI-SGLVA----AGVIPSPFEYADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKIN 231 (297)
Q Consensus 159 ~~g~~livD~a~~-~g~~~----~~~~~~~~~~~D~~~~s~~K~l~gp--~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~ 231 (297)
+||+++|+|++|+ +|-.. ...... ..|++++| |+|+|. +-|++++++ ++.+.+.
T Consensus 255 ~~gillI~DEv~~gfgr~G~~~a~~~~~v---~pdi~t~s--K~l~gg~~plG~v~~~~--------------~i~~~~~ 315 (472)
T 3hmu_A 255 KYDILLIADEVICGFGRTGNWFGTQTMGI---RPHIMTIA--KGLSSGYAPIGGSIVCD--------------EVAHVIG 315 (472)
T ss_dssp HTTCEEEEECTTTTTTTTSSSCHHHHHTC---CCSEEEEC--GGGTTTSSCCEEEEEEH--------------HHHHHHT
T ss_pred HcCCEEEEEccccCCcccCccchhHHhCC---CCceeeec--hhhhcCCcceEEEEECH--------------HHHHhcc
Confidence 9999999999986 22211 000011 46888876 998773 338888887 4555553
Q ss_pred hcccC-CCCCCCchHHHHHHHHHHHHHhhhcChhhHH-HHhhhhHHHHHhhccCCCCcccccC
Q 022463 232 QAVFP-GLQGGPHNHTITGLAVALKQVCTLITFSHIH-VFSLHVYPAFVSNQNNSENIEEDKG 292 (297)
Q Consensus 232 ~~~~~-~~~~t~~~~~~~al~~al~~~~~~~g~~~~~-~~~~~l~~~l~~~l~~~~~~~~~~g 292 (297)
...+. +.+.+.+....++..++|+.+.+..-+++++ ++...+.+.| +.|.+.+.+.+++|
T Consensus 316 ~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L-~~l~~~~~v~~vr~ 377 (472)
T 3hmu_A 316 KDEFNHGYTYSGHPVAAAVALENLRILEEENILDHVRNVAAPYLKEKW-EALTDHPLVGEAKI 377 (472)
T ss_dssp TSCBCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHH-HGGGGSTTEEEEEE
T ss_pred cCCccccCCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH-HHHhcCCCeEEEEe
Confidence 21111 1133445677778888888876541233444 4444444444 33444555555444
No 216
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.57 E-value=1.4e-13 Score=126.17 Aligned_cols=223 Identities=12% Similarity=-0.000 Sum_probs=129.0
Q ss_pred HHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHhc--CCCCeEEEecCCCCCcccccccc------cccccceeee
Q 022463 34 LCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTALL--KPHDRIMALDLPHGGHLSHGYQT------DTKKISAVSI 104 (297)
Q Consensus 34 ~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~~--~~gd~Vl~~~~~~~~~~~~~~~~------~~~~~~~~g~ 104 (297)
+.+++++++++.+.++ +++++|. .++..+++.+. ..+|.|++.+..+++........ ........+
T Consensus 89 ~l~~~la~~~~~~~~~----v~~~~gg~ea~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~- 163 (433)
T 1zod_A 89 DLATRLANITPPGLDR----ALLLSTGAESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVG- 163 (433)
T ss_dssp HHHHHHHHHSCTTCCE----EEEESCHHHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTT-
T ss_pred HHHHHHHHhCCCCcCE----EEEeCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCC-
Confidence 3347899999887654 7777655 67776776542 34678998887665432110000 000011112
Q ss_pred eeEeeecccCC--C-------CCcCCHHHHHHHhhh---cCCcEEEEcCC-C-CCCccc----HHHHHHHHHhcCCEEEE
Q 022463 105 FFETMPYRLNE--S-------TGYIDYDQLEKSATL---FRPKLIVAGAS-A-YARLYD----YERIRKVCNKQKAIMLA 166 (297)
Q Consensus 105 ~~~~v~~~~~~--~-------~~~~d~~~l~~~l~~---~~~~~v~~~~~-~-~G~~~~----~~~i~~la~~~g~~liv 166 (297)
+..++++... . .+.+|++++++.+++ .++++|+++++ | +|...+ +++|.++|++||+++|+
T Consensus 164 -~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~ 242 (433)
T 1zod_A 164 -SFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLIL 242 (433)
T ss_dssp -EEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEE
T ss_pred -ceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Confidence 2233322110 0 113479999999974 25667777543 3 686665 99999999999999999
Q ss_pred ehhhh-cccccccCCCCC-C-CCccEEEecCCccCCCCCc-eEEEEecCchhhccCCccchhhHHHHhhhcccC-CCCCC
Q 022463 167 DMAHI-SGLVAAGVIPSP-F-EYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFP-GLQGG 241 (297)
Q Consensus 167 D~a~~-~g~~~~~~~~~~-~-~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~t 241 (297)
|++|+ .|.... ..... + ...|++++| |+++++-. |+++++++ +.+.+...... ....+
T Consensus 243 DEv~~~~g~~g~-~~~~~~~~~~~di~s~s--K~~~~G~~ig~~~~~~~--------------~~~~~~~~~~~~~~t~~ 305 (433)
T 1zod_A 243 DEAQTGVGRTGT-MFACQRDGVTPDILTLS--KTLGAGLPLAAIVTSAA--------------IEERAHELGYLFYTTHV 305 (433)
T ss_dssp ECTTTTTTTTSS-SSTHHHHTCCCSEEEEC--HHHHTTSSCEEEEECHH--------------HHHHHHHTTCCCCCTTT
T ss_pred eccccCCCcCch-HhHHhhcCCCCCEEEec--ccccCCCCeeEEEEhHH--------------HHHhhccCCCCCCCCCC
Confidence 99997 332111 00000 0 146776554 98876333 99998873 44444332111 11223
Q ss_pred CchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccC
Q 022463 242 PHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNN 283 (297)
Q Consensus 242 ~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~ 283 (297)
.+.+..++..++++.+.+. + +.++.+++.+++.+.|++
T Consensus 306 ~~~~~~~a~~aal~~~~~~-~---~~~~~~~~~~~l~~~l~~ 343 (433)
T 1zod_A 306 SDPLPAAVGLRVLDVVQRD-G---LVARANVMGDRLRRGLLD 343 (433)
T ss_dssp TCHHHHHHHHHHHHHHHHT-T---HHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHhC-C---HHHHHHHHHHHHHHHHHH
Confidence 4667777878888877654 3 345555556666666554
No 217
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.56 E-value=1.4e-13 Score=125.99 Aligned_cols=216 Identities=11% Similarity=0.047 Sum_probs=122.0
Q ss_pred HHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHHh--cCCCCeEEEecCCCCCcccccccccccccce------
Q 022463 31 AESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKISA------ 101 (297)
Q Consensus 31 ~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~~--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~------ 101 (297)
..++..++++++++ ++++ +++++|. .++..+++.. ...++.|++.+..|++...........+...
T Consensus 93 ~~~~la~~l~~~~~-~~~~----v~~~~ggsea~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 167 (427)
T 3fq8_A 93 LENVLAEMVNDAVP-SIEM----VRFVNSGTEACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSS 167 (427)
T ss_dssp HHHHHHHHHHHHST-TCSE----EEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSC
T ss_pred HHHHHHHHHHHhCC-CCCE----EEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCC
Confidence 33344488999987 4443 6666555 6777666332 2345778887766655432211111001000
Q ss_pred eeee----eEeeecccCCCCCcCCHHHHHHHhhhc--CCcEEEEcCC--CCCCccc----HHHHHHHHHhcCCEEEEehh
Q 022463 102 VSIF----FETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAGAS--AYARLYD----YERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 102 ~g~~----~~~v~~~~~~~~~~~d~~~l~~~l~~~--~~~~v~~~~~--~~G~~~~----~~~i~~la~~~g~~livD~a 169 (297)
.+.. ...+.++. -|++++++.++++ ++++|++.+. +.|...| +++|.++|++||+++|+|++
T Consensus 168 ~~~~~~~~~~~~~~~~------~d~~~le~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv 241 (427)
T 3fq8_A 168 PGVPKKTTANTLTTPY------NDLEAVKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEV 241 (427)
T ss_dssp SSSCHHHHTTEEEEET------TCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECT
T ss_pred CCCCCcccCceeecCC------CCHHHHHHHHHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 0000 00111111 1899999999863 5677777433 3577777 99999999999999999999
Q ss_pred hhccccccc------CCCCCCCCccEEEecCCccCCCC-CceEEEEecCchhhccCCccchhhHHHHhhhcc--cCCCCC
Q 022463 170 HISGLVAAG------VIPSPFEYADVVTTTTHKSLRGP-RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV--FPGLQG 240 (297)
Q Consensus 170 ~~~g~~~~~------~~~~~~~~~D~~~~s~~K~l~gp-~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~ 240 (297)
|+ |. ..+ .... ..|++++| |++++. +.|+++.+++ +.+.+.... .-..+.
T Consensus 242 ~~-g~-~~g~~~~~~~~~~---~~di~t~s--K~~~~G~~~G~~~~~~~--------------~~~~~~~~~~~~~~~t~ 300 (427)
T 3fq8_A 242 IT-GF-RIAYGGVQEKFGV---TPDLTTLG--KIIGGGLPVGAYGGKRE--------------IMQLVAPAGPMYQAGTL 300 (427)
T ss_dssp TT-BT-TTBTTHHHHHTTC---CCSEEEEC--GGGGTTSSCEEEEECHH--------------HHTTBTTTSSBCCCCTT
T ss_pred cc-cc-ccCcchhhHhcCC---CCChhhhh--hhhhCCcceEEEEEcHH--------------HHHhhccCCCccccCCC
Confidence 87 33 111 1111 46877666 998753 3488888773 333333211 011122
Q ss_pred CCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhcc
Q 022463 241 GPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQN 282 (297)
Q Consensus 241 t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~ 282 (297)
+.+....++..++++.+.+. .+.++.+++.+++.+.|+
T Consensus 301 ~~~~~~~aa~~aal~~~~~~----~~~~~~~~~~~~~~~~l~ 338 (427)
T 3fq8_A 301 SGNPLAMTAGIKTLELLRQP----GTYEYLDQITKRLSDGLL 338 (427)
T ss_dssp TTCHHHHHHHHHHHHHHTST----THHHHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHH
Confidence 34677788888888877543 234444444444444443
No 218
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.55 E-value=2.7e-13 Score=124.20 Aligned_cols=210 Identities=11% Similarity=0.052 Sum_probs=118.7
Q ss_pred HHHHHHcCCCCCCCcceEEecC-ChHHHHHHHHHhc--CCCCeEEEecCCCCCccccccccccccccee------ee---
Q 022463 37 KRALEAFRLDPEKWGVNVQSLS-GSPSNFQVYTALL--KPHDRIMALDLPHGGHLSHGYQTDTKKISAV------SI--- 104 (297)
Q Consensus 37 ~~la~~~g~~~~~~~~~v~~~s-G~~~~~~~~~~~~--~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~------g~--- 104 (297)
++++++++ ..++ +++++ |+.++..+++.+. .+++.|++.+..+++...........+.... +.
T Consensus 100 ~~la~~~~-~~~~----v~~~~~Gsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~ 174 (429)
T 3k28_A 100 KLVIERVP-SIEI----VRMVNSGTEATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEG 174 (429)
T ss_dssp HHHHHHST-TCSE----EEEESSHHHHHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHH
T ss_pred HHHHHhCC-CCCE----EEEeCChHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCc
Confidence 78888886 3443 66655 5578877776654 3678888877665543321111100000000 00
Q ss_pred -eeEeeecccCCCCCcCCHHHHHHHhhh--cCCcEEEEcCCC--CCCccc----HHHHHHHHHhcCCEEEEehhhhcccc
Q 022463 105 -FFETMPYRLNESTGYIDYDQLEKSATL--FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLV 175 (297)
Q Consensus 105 -~~~~v~~~~~~~~~~~d~~~l~~~l~~--~~~~~v~~~~~~--~G~~~~----~~~i~~la~~~g~~livD~a~~~g~~ 175 (297)
....+.++. -|++++++++++ .++++|++.+.+ .|...| +++|.++|++||+++|+|++|. |.
T Consensus 175 ~~~~~~~~~~------~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-g~- 246 (429)
T 3k28_A 175 VAKNTITVAY------NDLESVKYAFEQFGDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMT-GF- 246 (429)
T ss_dssp HHTTEEEEET------TCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTT-TT-
T ss_pred ccCceeecCC------CCHHHHHHHHHhCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccc-cc-
Confidence 000011111 179999999874 256677774333 567777 9999999999999999999984 33
Q ss_pred cccC------CCCCCCCccEEEecCCccCCCC-CceEEEEecCchhhccCCccchhhHHHHhhhcc--cCCCCCCCchHH
Q 022463 176 AAGV------IPSPFEYADVVTTTTHKSLRGP-RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV--FPGLQGGPHNHT 246 (297)
Q Consensus 176 ~~~~------~~~~~~~~D~~~~s~~K~l~gp-~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~t~~~~~ 246 (297)
..+. ... ..|++++| |+++++ +.|+++++++ +.+.+.... ....+.+.+...
T Consensus 247 ~~g~~~~~~~~~~---~~di~t~s--K~~~~G~~iG~~~~~~~--------------~~~~~~~~~~~~~~~t~~~~~~a 307 (429)
T 3k28_A 247 RVAYNCGQGYYGV---TPDLTCLG--KVIGGGLPVGAYGGKAE--------------IMRQVAPSGPIYQAGTLSGNPLA 307 (429)
T ss_dssp TSSTTHHHHHHTC---CCSEEEEC--GGGGTTSCCEEEEECHH--------------HHTTBTTTSSBCCCCTTTTCHHH
T ss_pred ccCcchHHHHhCC---CCceehhh--hhhcCCCCeEEEEEcHH--------------HHhhhccCCCccccCCCCCChHH
Confidence 1110 011 46777665 988653 3388888773 333332211 111123455666
Q ss_pred HHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccC
Q 022463 247 ITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNN 283 (297)
Q Consensus 247 ~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~ 283 (297)
.++..++|+.+. ++..++.+++.+++.+.|++
T Consensus 308 ~aaa~aal~~~~-----~~~~~~~~~~~~~l~~~L~~ 339 (429)
T 3k28_A 308 MAAGYETLVQLT-----PESYVEFERKAEMLEAGLRK 339 (429)
T ss_dssp HHHHHHHHHTCC-----HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHH
Confidence 667667776553 34555555555555555544
No 219
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.54 E-value=6.4e-13 Score=121.65 Aligned_cols=216 Identities=10% Similarity=0.118 Sum_probs=117.3
Q ss_pred HHHHHHHHcCCCCCCCcceEEecC-ChHHHHHHHHHh--cCCCCeEEEecCCCCCccccccccccccc------ceeeee
Q 022463 35 CQKRALEAFRLDPEKWGVNVQSLS-GSPSNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKI------SAVSIF 105 (297)
Q Consensus 35 ~~~~la~~~g~~~~~~~~~v~~~s-G~~~~~~~~~~~--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~------~~~g~~ 105 (297)
..++++++++ ..++ +++++ |+.++..+++.. ...++.|++.+..+++...........+. ...+..
T Consensus 98 la~~l~~~~~-~~~~----v~~~~sGsea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (429)
T 4e77_A 98 MAQLVTDLVP-TMDM----VRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVP 172 (429)
T ss_dssp HHHHHHHHST-TCSE----EEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSC
T ss_pred HHHHHHhhCC-CCCE----EEEeCcHHHHHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCC
Confidence 3388888887 4443 66655 556777676643 23567788877665544321000000000 000000
Q ss_pred ----eEeeecccCCCCCcCCHHHHHHHhhhc--CCcEEEEcCCC--CCCccc----HHHHHHHHHhcCCEEEEehhhhcc
Q 022463 106 ----FETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISG 173 (297)
Q Consensus 106 ----~~~v~~~~~~~~~~~d~~~l~~~l~~~--~~~~v~~~~~~--~G~~~~----~~~i~~la~~~g~~livD~a~~~g 173 (297)
.....++ ..|+++|++.+++. ++++|++.+.+ .|...| +++|.++|++||+++|+|++|+ |
T Consensus 173 ~~~~~~~~~~~------~~d~~~le~~l~~~~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~-g 245 (429)
T 4e77_A 173 TDFAKHTLTCT------YNDLASVRQAFEQYPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMT-G 245 (429)
T ss_dssp GGGGTTEEEEC------TTCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTT-B
T ss_pred CccCCceeecC------CCCHHHHHHHHHhcCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-C
Confidence 0001111 12899999999852 45666665443 466666 9999999999999999999997 3
Q ss_pred cccccC-CCC-CCC-CccEEEecCCccCCCC-CceEEEEecCchhhccCCccchhhHHHHhhhcc--cCCCCCCCchHHH
Q 022463 174 LVAAGV-IPS-PFE-YADVVTTTTHKSLRGP-RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV--FPGLQGGPHNHTI 247 (297)
Q Consensus 174 ~~~~~~-~~~-~~~-~~D~~~~s~~K~l~gp-~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~t~~~~~~ 247 (297)
. ..+. ... .+. ..|++++| |+++++ +.|+++.+++ +.+.+.... ....+.+.+....
T Consensus 246 ~-r~g~~~~~~~~~~~pdi~t~s--K~~~~G~~~G~~~~~~~--------------~~~~l~~~~~~~~~~t~~~~~~~~ 308 (429)
T 4e77_A 246 F-RVALAGAQDYYHVIPDLTCLG--KIIGGGMPVGAFGGRRE--------------VMNALAPTGPVYQAGTLSGNPIAM 308 (429)
T ss_dssp T-TTBTTCHHHHTTCCCSEEEEE--GGGGTTSCCEEEEECHH--------------HHTTBTTTSSBCC--CCCCCHHHH
T ss_pred c-ccCcchHHHhcCCCCCeeeec--ccccCCCCeEEEEECHH--------------HHHHhccCCCccccCCCCCCHHHH
Confidence 2 1110 000 000 45877665 988653 3488888773 333332211 0111234667788
Q ss_pred HHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccC
Q 022463 248 TGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNN 283 (297)
Q Consensus 248 ~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~ 283 (297)
++..++|+.+.+. .+.++.+++.+++.+.|++
T Consensus 309 aaa~aal~~~~~~----~~~~~~~~~~~~l~~~L~~ 340 (429)
T 4e77_A 309 AAGFACLTEISQV----GVYETLTELTDSLATGLRH 340 (429)
T ss_dssp HHHHHHHHHHTST----THHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHH
Confidence 8888888887543 3344444444444444443
No 220
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.52 E-value=4.2e-13 Score=123.07 Aligned_cols=218 Identities=12% Similarity=0.088 Sum_probs=126.7
Q ss_pred HHHHHHHHHHcCCCCCCCcceEEecCC-hHHHHHHHHHh--cCCCCeEEEecCCCCCcccccccc-ccc----c-cceee
Q 022463 33 SLCQKRALEAFRLDPEKWGVNVQSLSG-SPSNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQT-DTK----K-ISAVS 103 (297)
Q Consensus 33 ~~~~~~la~~~g~~~~~~~~~v~~~sG-~~~~~~~~~~~--~~~gd~Vl~~~~~~~~~~~~~~~~-~~~----~-~~~~g 103 (297)
++.+++++++++ ..++ +++++| +.++..+++.. +.+++.|++.+..|++........ ... + ....|
T Consensus 99 ~~l~~~la~~~~-~~~~----v~~~~sgseA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g 173 (434)
T 2epj_A 99 VLLAEKILGYVK-RGGM----IRFVNSGTEATMTAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAG 173 (434)
T ss_dssp HHHHHHHHHHHC-TTCE----EEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESSTT
T ss_pred HHHHHHHHHhCC-CCCE----EEEeCCHHHHHHHHHHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCC
Confidence 334488888884 3332 666554 56887777651 344567887777766543221100 000 0 00001
Q ss_pred ee----eEeeecccCCCCCcCCHHHHHHHhhh--cCCcEEEEcCC--CCCCccc----HHHHHHHHHhcCCEEEEehhhh
Q 022463 104 IF----FETMPYRLNESTGYIDYDQLEKSATL--FRPKLIVAGAS--AYARLYD----YERIRKVCNKQKAIMLADMAHI 171 (297)
Q Consensus 104 ~~----~~~v~~~~~~~~~~~d~~~l~~~l~~--~~~~~v~~~~~--~~G~~~~----~~~i~~la~~~g~~livD~a~~ 171 (297)
.. ...++++. .|++.+++.+++ .++++|++.+. ++|.+.| +++|.++|++||+++|+|++|+
T Consensus 174 ~~~~~~~~~~~~~~------~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~ 247 (434)
T 2epj_A 174 VPEAVARLTLVTPY------NDVEALERVFAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVT 247 (434)
T ss_dssp CCHHHHTTEEEEET------TCHHHHHHHHHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTT
T ss_pred CCCcccCceEecCC------CCHHHHHHHHHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchh
Confidence 00 01122222 389999999974 26777777433 3688887 9999999999999999999997
Q ss_pred cccccccCCCCC---CC-CccEEEecCCccCCCC-CceEEEEecCchhhccCCccchhhHHHHhhhcc--cCCCCCCCch
Q 022463 172 SGLVAAGVIPSP---FE-YADVVTTTTHKSLRGP-RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV--FPGLQGGPHN 244 (297)
Q Consensus 172 ~g~~~~~~~~~~---~~-~~D~~~~s~~K~l~gp-~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~t~~~ 244 (297)
|.. .+. ... +. .+|++++| |++++. +.|+++++++ +.+.+.... ......+.+.
T Consensus 248 -g~~-~g~-~~~~~~~~~~~di~s~s--K~l~~G~~~G~v~~~~~--------------~~~~l~~~~~~~~~~t~~~~~ 308 (434)
T 2epj_A 248 -GFR-LGL-EGAQGYFNIEGDIIVLG--KIIGGGFPVGAVAGSRE--------------VMSLLTPQGKVFNAGTFNAHP 308 (434)
T ss_dssp -TTT-SST-THHHHHHTCCCSEEEEE--GGGGTTSSCEEEEECHH--------------HHTTBTTTSSBCCCCTTTTCH
T ss_pred -cee-CCc-chhhHHhCCCCCeeeec--chhcCCcceeeeeecHH--------------HHHhhccCCCcccCCCCCcCH
Confidence 442 111 000 00 46877655 998662 4588888873 333332210 0111223566
Q ss_pred HHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 245 HTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 245 ~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
..+++..++|+.+.+. .+.++.+++.+++.+.|+++
T Consensus 309 ~~~aa~~a~l~~~~~~----~~~~~~~~~~~~l~~~L~~~ 344 (434)
T 2epj_A 309 ITMAAGLATLKALEEE----PVYSVSREAAKALEEAASEV 344 (434)
T ss_dssp HHHHHHHHHHHHHHHS----CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHH
Confidence 7777888888877643 35566666777777766654
No 221
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.52 E-value=4.4e-13 Score=123.86 Aligned_cols=240 Identities=12% Similarity=0.049 Sum_probs=129.4
Q ss_pred HHHHHHHHHHHHcCCC-CCCCcceEEecC-ChHHHHHHHHHhc--CCCCeEEEecCCCCCcccccccc------cccccc
Q 022463 31 AESLCQKRALEAFRLD-PEKWGVNVQSLS-GSPSNFQVYTALL--KPHDRIMALDLPHGGHLSHGYQT------DTKKIS 100 (297)
Q Consensus 31 ~e~~~~~~la~~~g~~-~~~~~~~v~~~s-G~~~~~~~~~~~~--~~gd~Vl~~~~~~~~~~~~~~~~------~~~~~~ 100 (297)
...+.+++++++++.+ .++ +++++ |+.++..+++... ..++.|++.+..+++........ ...+..
T Consensus 108 ~~~~la~~l~~~~~~~~~~~----v~~~~sGseA~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 183 (453)
T 4ffc_A 108 QYVQVAELLNALTPGDHDKR----TALFNSGAEAVENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFG 183 (453)
T ss_dssp HHHHHHHHHHHHSSCSSCEE----EEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSC
T ss_pred HHHHHHHHHHHhCCCCCCcE----EEEeCcHHHHHHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCC
Confidence 3334448899998854 333 66655 5568887776553 35688888887766543211100 000000
Q ss_pred eeeeeeEeeecccCC-CCCcCC--------HHHHHHHhhhcCCcEEEEcCCC-C-CCccc----HHHHHHHHHhcCCEEE
Q 022463 101 AVSIFFETMPYRLNE-STGYID--------YDQLEKSATLFRPKLIVAGASA-Y-ARLYD----YERIRKVCNKQKAIML 165 (297)
Q Consensus 101 ~~g~~~~~v~~~~~~-~~~~~d--------~~~l~~~l~~~~~~~v~~~~~~-~-G~~~~----~~~i~~la~~~g~~li 165 (297)
.....+..++++... +....+ ++.+++.+...++.+|++.+.+ . |...+ +++|.++|++||+++|
T Consensus 184 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI 263 (453)
T 4ffc_A 184 PFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFI 263 (453)
T ss_dssp SCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEE
T ss_pred CCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEE
Confidence 001112333333210 111122 3556666654345566665444 3 55555 8999999999999999
Q ss_pred Eehhhh-cccccccCCCCC-C-CCccEEEecCCccCCCCCc-eEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCC
Q 022463 166 ADMAHI-SGLVAAGVIPSP-F-EYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGG 241 (297)
Q Consensus 166 vD~a~~-~g~~~~~~~~~~-~-~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t 241 (297)
+|++|+ .|.... ..... + -..|++++| |++++.-. |+++++++ +.+.+..... ....+
T Consensus 264 ~DEv~~g~g~~g~-~~a~~~~~~~pdi~t~s--K~~~~G~~~G~~~~~~~--------------i~~~~~~~~~-~~t~~ 325 (453)
T 4ffc_A 264 ADEVQTGFARTGA-WFASEHEGIVPDIVTMA--KGIAGGMPLSAVTGRAE--------------LMDAVYAGGL-GGTYG 325 (453)
T ss_dssp EECTTTTTTTTSS-SSTHHHHTCCCSEEEEC--GGGGTTSSCEEEEEEHH--------------HHTTSCTTSS-CCSSS
T ss_pred EecCccCCCcccc-cchhhhcCCCcchHhhh--hhhcCCcCeEEEEECHH--------------HHhhhcccCc-CCCCC
Confidence 999985 221110 00000 0 046877766 98865323 88888773 3333332211 11234
Q ss_pred CchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcccccC
Q 022463 242 PHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIEEDKG 292 (297)
Q Consensus 242 ~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~~~g 292 (297)
.+.+..++..++|+.+.+..-.+++++....+.+.+.+.+++.+.+..++|
T Consensus 326 ~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 376 (453)
T 4ffc_A 326 GNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIGEVRG 376 (453)
T ss_dssp SCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEEEEEE
T ss_pred cCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEe
Confidence 456777777888887765422455555555555656555555666555444
No 222
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.52 E-value=2.7e-13 Score=125.09 Aligned_cols=217 Identities=9% Similarity=0.027 Sum_probs=124.8
Q ss_pred HHHHHHcC-CCCCCCcceEEecCCh-HHHHHHHHHhc---C-----------CCCeEEEecCCCCCcccccccccc----
Q 022463 37 KRALEAFR-LDPEKWGVNVQSLSGS-PSNFQVYTALL---K-----------PHDRIMALDLPHGGHLSHGYQTDT---- 96 (297)
Q Consensus 37 ~~la~~~g-~~~~~~~~~v~~~sG~-~~~~~~~~~~~---~-----------~gd~Vl~~~~~~~~~~~~~~~~~~---- 96 (297)
++++++++ .+.++ +++++|. .++..+++... . +||+|++.+..|++..........
T Consensus 108 ~~la~~~~~~~~~~----v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~ 183 (449)
T 2cjg_A 108 ETFARVLGDPALPH----LFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPT 183 (449)
T ss_dssp HHHHHHHCCTTCCE----EEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHH
T ss_pred HHHHHhcCCCCCCE----EEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchh
Confidence 78888887 34443 6666554 67776665432 2 289999998877665443221111
Q ss_pred --cccceeeeeeEeeecccCC--CC-------CcCCHHHHHHHhhh--cCCcEEEEcCC-C-CCCccc----HHHHHHHH
Q 022463 97 --KKISAVSIFFETMPYRLNE--ST-------GYIDYDQLEKSATL--FRPKLIVAGAS-A-YARLYD----YERIRKVC 157 (297)
Q Consensus 97 --~~~~~~g~~~~~v~~~~~~--~~-------~~~d~~~l~~~l~~--~~~~~v~~~~~-~-~G~~~~----~~~i~~la 157 (297)
.+..-....+ +.++.+. .. ...|++.|++.+++ .++++|++++. | +|...+ +++|.++|
T Consensus 184 ~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~ 261 (449)
T 2cjg_A 184 ITARFPKFDWPR--IDAPYMRPGLDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELC 261 (449)
T ss_dssp HHTTSCCCCCCE--ECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHH
T ss_pred hcccCCCCCCCc--EEEcCCCchhhccccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHH
Confidence 0110000012 2223331 01 12566779998863 26778888543 3 686666 89999999
Q ss_pred HhcCCEEEEehhhh-cccccccCCCCC-C-CCccEEEecCCccCCCCCceEEEEecCchhhccCCccchhhHHHHhhhc-
Q 022463 158 NKQKAIMLADMAHI-SGLVAAGVIPSP-F-EYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQA- 233 (297)
Q Consensus 158 ~~~g~~livD~a~~-~g~~~~~~~~~~-~-~~~D~~~~s~~K~l~gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~- 233 (297)
++||+++|+|++|+ .|.... ..... + -..|++++| |++ | -|++++++++ .+.+.+.
T Consensus 262 ~~~g~lli~DEv~~g~g~~g~-~~~~~~~~~~~di~t~s--K~l--~-iG~~~~~~~~--------------~~~l~~~~ 321 (449)
T 2cjg_A 262 DEFDALLIFDEVQTGCGLTGT-AWAYQQLDVAPDIVAFG--KKT--Q-VCGVMAGRRV--------------DEVADNVF 321 (449)
T ss_dssp HHTTCEEEEECTTTTTTTTSS-SSTHHHHTCCCSEEEEC--GGG--S-SEEEEECGGG--------------GGSTTCTT
T ss_pred HHCCcEEEEeccccCCCccCc-ceeecccCCCceEEEec--Ccc--c-EEEEEECHHH--------------hhhhhhcc
Confidence 99999999999997 322111 00000 0 046887665 998 4 4666777643 2211110
Q ss_pred ---ccCCCCCCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccC
Q 022463 234 ---VFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNN 283 (297)
Q Consensus 234 ---~~~~~~~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~ 283 (297)
.......+.+.+..++..++|+.+.+. + +.++.+++.+++.+.|++
T Consensus 322 ~~~~~~~~t~~~n~~~~~aa~aal~~~~~~-~---~~~~~~~~~~~l~~~L~~ 370 (449)
T 2cjg_A 322 AVPSRLNSTWGGNLTDMVRARRILEVIEAE-G---LFERAVQHGKYLRARLDE 370 (449)
T ss_dssp TSTTSSCCSSSSCHHHHHHHHHHHHHHHHH-T---HHHHHHHHHHHHHHHHHH
T ss_pred cCCcccccCCCCCHHHHHHHHHHHHHHHhc-c---HHHHHHHHHHHHHHHHHH
Confidence 001112344667778888889877654 3 456666667777777764
No 223
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.51 E-value=3.4e-13 Score=124.38 Aligned_cols=221 Identities=11% Similarity=0.043 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcceEEecCCh-HHHHHHHHH---hcCCCCeEEEecCCCCCccccccccc-c-cc-cc
Q 022463 28 IDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-PSNFQVYTA---LLKPHDRIMALDLPHGGHLSHGYQTD-T-KK-IS 100 (297)
Q Consensus 28 ~~~~e~~~~~~la~~~g~~~~~~~~~v~~~sG~-~~~~~~~~~---~~~~gd~Vl~~~~~~~~~~~~~~~~~-~-~~-~~ 100 (297)
..++++...+++++.++ +.++ +++++|. +++..+++. +.++ +.|++.+..|++......... . .+ ..
T Consensus 95 ~~~~~~~la~~l~~~~~-~~~~----v~~~~gg~eA~~~al~~ar~~~~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~ 168 (453)
T 2cy8_A 95 SHPLEVRWAERIVAAFP-SIRK----LRFTGSGTETTLLALRVARAFTGR-RMILRFEGHYHGWHDFSASGYNSHFDGQP 168 (453)
T ss_dssp SCHHHHHHHHHHHHHCT-TCSE----EEEESCHHHHHHHHHHHHHHHHCC-CEEEEECC---------------------
T ss_pred CCHHHHHHHHHHHhhCC-CCCE----EEEeCCHHHHHHHHHHHHHHhhCC-CEEEEEcCCcCCCchhhHhhcCCccCCCc
Confidence 34566666688888886 4443 6665555 677777776 5554 667777766654332211100 0 00 00
Q ss_pred eeeeee----EeeecccCCCCCcCCHHHHHHHhhh--cCCcEEEEcCC-C-CCCccc----HHHHHHHHHhcCCEEEEeh
Q 022463 101 AVSIFF----ETMPYRLNESTGYIDYDQLEKSATL--FRPKLIVAGAS-A-YARLYD----YERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 101 ~~g~~~----~~v~~~~~~~~~~~d~~~l~~~l~~--~~~~~v~~~~~-~-~G~~~~----~~~i~~la~~~g~~livD~ 168 (297)
..|... ..+.++. .|++++++.+++ .++++|++++. + +|...| +++|.++|++||+++|+|+
T Consensus 169 ~~g~~~~~~~~~~~~~~------~d~~~le~~l~~~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DE 242 (453)
T 2cy8_A 169 APGVLPETTANTLLIRP------DDIEGMREVFANHGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDE 242 (453)
T ss_dssp -------CGGGEEEECT------TCHHHHHHHHHHHGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCCCccccCceeecCC------CCHHHHHHHHHhcCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 011100 0111121 389999999974 26778777543 2 687777 9999999999999999999
Q ss_pred hhhcccccccCCCCC---CC-CccEEEecCCccCCC-CCceEEEEecCchhhccCCccchhhHHHHhhh---cc-cCCCC
Q 022463 169 AHISGLVAAGVIPSP---FE-YADVVTTTTHKSLRG-PRGAMIFFRKGVKEINKQGKEVFYDYEEKINQ---AV-FPGLQ 239 (297)
Q Consensus 169 a~~~g~~~~~~~~~~---~~-~~D~~~~s~~K~l~g-p~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~---~~-~~~~~ 239 (297)
+|+ |. ..+. ... +. ..|++++| |++++ .+.|++++++++ .+.+.. .. .....
T Consensus 243 v~~-g~-~~g~-~~~~~~~~~~~di~s~s--K~l~~G~~~G~v~~~~~~--------------~~~l~~~~~~~~~~~~t 303 (453)
T 2cy8_A 243 VIS-GF-RVGN-HGMQALLDVQPDLTCLA--KASAGGLPGGILGGREDV--------------MGVLSRGSDRKVLHQGT 303 (453)
T ss_dssp TTT-TT-TTCT-THHHHHHTCCCSEEEEE--GGGGTTSSCEEEEECHHH--------------HTTSSSCC---------
T ss_pred Ccc-cc-ccCc-hhhhHHhCCCCcEEEEC--hhhhCCcceEEEechHHH--------------HHHhccccCCCceeCCC
Confidence 997 44 2111 000 01 46877555 99875 345999988743 222221 00 00112
Q ss_pred CCCchHHHHHHHHHHHH-HhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 240 GGPHNHTITGLAVALKQ-VCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 240 ~t~~~~~~~al~~al~~-~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
.+.+....++..++|+. + .. .+.++.+++.+++.+.|+++
T Consensus 304 ~~~n~~~~aa~~aal~~~~-~~----~~~~~~~~~~~~l~~~L~~~ 344 (453)
T 2cy8_A 304 FTGNPITAAAAIAAIDTIL-ED----DVCAKINDLGQFAREAMNHL 344 (453)
T ss_dssp CCCCHHHHHHHHHHHHHHH-HT----THHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHh-hh----hHHHHHHHHHHHHHHHHHHH
Confidence 24556777777888887 6 32 34556666666666666553
No 224
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.50 E-value=2.2e-13 Score=128.64 Aligned_cols=168 Identities=13% Similarity=0.118 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHHHcCC-----CCCCCcceEEecCChH-HHHHHHHH-----hcCCCCeEEEecCCCCCcccccccccccc
Q 022463 30 MAESLCQKRALEAFRL-----DPEKWGVNVQSLSGSP-SNFQVYTA-----LLKPHDRIMALDLPHGGHLSHGYQTDTKK 98 (297)
Q Consensus 30 ~~e~~~~~~la~~~g~-----~~~~~~~~v~~~sG~~-~~~~~~~~-----~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~ 98 (297)
..++.++.++.+..+. +++ +|++++|++ ++..++.+ +++|||.|+++.+.|++.....
T Consensus 143 lr~~ia~~~~~~~~~~~~~~~~~~----~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~------- 211 (546)
T 2zy4_A 143 ISEKIVRQYIIREMGADAIPSESV----NLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIP------- 211 (546)
T ss_dssp HHHHHHHHHHHHHTTCTTSCGGGE----EEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHH-------
T ss_pred HHHHHHHHHHHHhccCCCCCCCcc----eEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHH-------
Confidence 3344455666665533 223 499999985 55546655 4789999999997766654321
Q ss_pred cceeeeeeEeeecccCCC-CCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccH---HHHHHHH--HhcCCEEEEehhh
Q 022463 99 ISAVSIFFETMPYRLNES-TGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDY---ERIRKVC--NKQKAIMLADMAH 170 (297)
Q Consensus 99 ~~~~g~~~~~v~~~~~~~-~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~---~~i~~la--~~~g~~livD~a~ 170 (297)
.+.+...+.++++.+++ ++.+|++.+++.++. ++++|++ +++| +|.+.+. ++|.++| +++|+++|+|+++
T Consensus 212 -~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~-~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y 289 (546)
T 2zy4_A 212 -ELAQYALEEVAINADPSLNWQYPDSELDKLKDP-AIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVY 289 (546)
T ss_dssp -HSTTSCCEEEEEECBGGGTTBCCHHHHGGGGST-TEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTT
T ss_pred -HHcCCCcEEEEEecCcccCCCCCHHHHHHhhCC-CCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcc
Confidence 11111123344444432 367999999988765 7899888 7888 8988764 5677888 7899999999998
Q ss_pred hccccc-ccCCCCCCCCccEEEecCCccCCC--CCceEEEEecC
Q 022463 171 ISGLVA-AGVIPSPFEYADVVTTTTHKSLRG--PRGAMIFFRKG 211 (297)
Q Consensus 171 ~~g~~~-~~~~~~~~~~~D~~~~s~~K~l~g--p~gG~i~~~~~ 211 (297)
+..... ..+... ..+.++++.|++|+++. -+.|+++++++
T Consensus 290 ~~~~~~~~s~~~~-~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~ 332 (546)
T 2zy4_A 290 GTFADDFQSLFAI-CPENTLLVYSFSKYFGATGWRLGVVAAHQQ 332 (546)
T ss_dssp GGGSTTCCCHHHH-CGGGEEEEEESTTTTTCGGGCEEEEEEESS
T ss_pred hhhcccCcCHHHh-CCCCEEEEEeCccccCCCCcceEEEEECCH
Confidence 743321 000000 01356889999998743 33499999875
No 225
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.50 E-value=2.9e-13 Score=124.95 Aligned_cols=237 Identities=9% Similarity=0.023 Sum_probs=127.5
Q ss_pred HHHHHHHHHHHcCCC-CCCCcceEEec-CChHHHHHHHHHhcC--CCCeEEEecCCCCCcccccccc------cccccce
Q 022463 32 ESLCQKRALEAFRLD-PEKWGVNVQSL-SGSPSNFQVYTALLK--PHDRIMALDLPHGGHLSHGYQT------DTKKISA 101 (297)
Q Consensus 32 e~~~~~~la~~~g~~-~~~~~~~v~~~-sG~~~~~~~~~~~~~--~gd~Vl~~~~~~~~~~~~~~~~------~~~~~~~ 101 (297)
+.+..++++++++.+ .+. ++++ +|+.++..+++.... .++.|++.+..+++........ ...+...
T Consensus 106 ~~~la~~l~~~~~~~~~~~----v~~~~sGseA~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~ 181 (451)
T 3oks_A 106 YVAVCEQLNRLTPVRGDKR----SALFNSGSEAVENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGP 181 (451)
T ss_dssp HHHHHHHHHHHSSCCSSEE----EEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCS
T ss_pred HHHHHHHHHHhCCcCCCCE----EEEeCcHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCC
Confidence 334448899998754 232 5555 555788877766543 4588888887766543211100 0001100
Q ss_pred eeeeeEeeecccC-------CCC---CcCCHHHHHHHhh----hcCCcEEEEcCCC--CCCccc----HHHHHHHHHhcC
Q 022463 102 VSIFFETMPYRLN-------EST---GYIDYDQLEKSAT----LFRPKLIVAGASA--YARLYD----YERIRKVCNKQK 161 (297)
Q Consensus 102 ~g~~~~~v~~~~~-------~~~---~~~d~~~l~~~l~----~~~~~~v~~~~~~--~G~~~~----~~~i~~la~~~g 161 (297)
....+..++++.. .+. ...+++.+++.+. ..++++|++.+.+ .|...+ +++|.++|++||
T Consensus 182 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g 261 (451)
T 3oks_A 182 FAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKND 261 (451)
T ss_dssp CCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTT
T ss_pred CCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcC
Confidence 1111333333210 000 1123444545554 2245666664433 355555 899999999999
Q ss_pred CEEEEehhhh-ccccc----ccCCCCCCCCccEEEecCCccCCCCCc-eEEEEecCchhhccCCccchhhHHHHhhhccc
Q 022463 162 AIMLADMAHI-SGLVA----AGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVF 235 (297)
Q Consensus 162 ~~livD~a~~-~g~~~----~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 235 (297)
+++|+|++|+ .|... ...... ..|++++| |++++.-. |+++.+++ +.+.+.....
T Consensus 262 ~~lI~DEv~~g~g~~g~~~~~~~~~~---~pdi~t~s--K~l~~G~~iG~v~~~~~--------------~~~~~~~~~~ 322 (451)
T 3oks_A 262 VVFIADEVQTGFARTGAMFACEHEGI---DPDLIVTA--KGIAGGLPLSAVTGRAE--------------IMDSPHVSGL 322 (451)
T ss_dssp CEEEEECTTTTTTTTSSSSGGGGGTC---CCSEEEEC--GGGGTTSSCEEEEEEHH--------------HHTCSCTTSB
T ss_pred CEEEEEecccCCCccccchhhhhcCC---CCCeeeeh--hhhhCCcceEEEEECHH--------------HHhhhcCCCc
Confidence 9999999986 22111 010111 46877665 99866323 88888773 3333332211
Q ss_pred CCCCCCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcccccC
Q 022463 236 PGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIEEDKG 292 (297)
Q Consensus 236 ~~~~~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~~~g 292 (297)
. ...+.+.+..++..++|+.+.+..-+++++++...+.+.+.+.+++.+.+..++|
T Consensus 323 ~-~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 378 (451)
T 3oks_A 323 G-GTYGGNPIACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAEDDRIGDVRG 378 (451)
T ss_dssp C-CSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEE
T ss_pred C-CCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEE
Confidence 1 1234456777777888887765412455555555555555555555565555443
No 226
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.49 E-value=1.6e-12 Score=118.84 Aligned_cols=219 Identities=13% Similarity=0.058 Sum_probs=127.7
Q ss_pred HHHHHHHHHHHHcCCCCCCCcceEEecC-ChHHHHHHHHH---hcCCCCeEEEecCCCCCcccccccc-ccc--c---cc
Q 022463 31 AESLCQKRALEAFRLDPEKWGVNVQSLS-GSPSNFQVYTA---LLKPHDRIMALDLPHGGHLSHGYQT-DTK--K---IS 100 (297)
Q Consensus 31 ~e~~~~~~la~~~g~~~~~~~~~v~~~s-G~~~~~~~~~~---~~~~gd~Vl~~~~~~~~~~~~~~~~-~~~--~---~~ 100 (297)
++++.+++++++++ +.++ +++++ |+.++..+++. +.+ ++.|++.+..+++........ ... . ..
T Consensus 93 ~~~~l~~~l~~~~~-~~~~----v~~~~~g~ea~~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~ 166 (424)
T 2e7u_A 93 LEVALAKKVKRAYP-FVDL----VRFVNSGTEATMSALRLARGYTG-RPYIVKFRGNYHGHADGLLVEAGSGALTLGVPS 166 (424)
T ss_dssp HHHHHHHHHHHHCT-TCCE----EEEESSHHHHHHHHHHHHHHHHC-CCEEEEETTCCCCCCGGGSEECCSSSCCBCEES
T ss_pred HHHHHHHHHHHhCC-CCCE----EEEeCCHHHHHHHHHHHHHHhhC-CCEEEEECCCcCCCcHHHHHhcCCcccccCCCC
Confidence 33444488888885 4443 66655 45677767764 444 577888777766543211110 000 0 00
Q ss_pred eeeee----eEeeecccCCCCCcCCHHHHHHHhhh--cCCcEEEEcCC--CCCCccc----HHHHHHHHHhcCCEEEEeh
Q 022463 101 AVSIF----FETMPYRLNESTGYIDYDQLEKSATL--FRPKLIVAGAS--AYARLYD----YERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 101 ~~g~~----~~~v~~~~~~~~~~~d~~~l~~~l~~--~~~~~v~~~~~--~~G~~~~----~~~i~~la~~~g~~livD~ 168 (297)
..|.. ...++++. .|++++++.+++ .++++|++++. ++|...| +++|.++ ++||+++|+|+
T Consensus 167 ~~g~~~~~~~~~~~~~~------~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DE 239 (424)
T 2e7u_A 167 SAGVPEEYAKLTLVLEY------NDPEGLREVLKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADE 239 (424)
T ss_dssp STTCCHHHHTTEEEECT------TCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEEC
T ss_pred CCCCCCccCCceEeCCC------CCHHHHHHHHHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEec
Confidence 00100 01122222 389999999974 25677777543 3687777 9999999 99999999999
Q ss_pred hhhcccccccCCCCC---C-CCccEEEecCCccCCCC-CceEEEEecCchhhccCCccchhhHHHHhhhcc--cCCCCCC
Q 022463 169 AHISGLVAAGVIPSP---F-EYADVVTTTTHKSLRGP-RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV--FPGLQGG 241 (297)
Q Consensus 169 a~~~g~~~~~~~~~~---~-~~~D~~~~s~~K~l~gp-~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~t 241 (297)
+|+ |.. .+. ... + ...|++++ +|+++++ +.|+++++++ +.+.+.... ......+
T Consensus 240 v~~-g~~-~g~-~~~~~~~~~~~di~s~--sK~l~~G~~~G~~~~~~~--------------~~~~~~~~~~~~~~~t~~ 300 (424)
T 2e7u_A 240 VMT-GFR-LAF-GGATELLGLKPDLVTL--GKILGGGLPAAAYAGRRE--------------IMEKVAPLGPVYQAGTLS 300 (424)
T ss_dssp TTT-TTT-SST-THHHHHHTCCCSEEEE--CGGGGTTSSCEEEEECHH--------------HHTTBTTTSSBCCCCTTC
T ss_pred Ccc-ccc-cch-hHHHHHhCCCcchhhh--hhhhhCCcceEEEEEcHH--------------HHhhhcccCCcccCCCCC
Confidence 997 442 111 000 0 04687644 5998753 4488888873 333333210 0111224
Q ss_pred CchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 242 PHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 242 ~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
.+...+++..++|+.+.+ .+.+.++.+++.+++.+.|+++
T Consensus 301 ~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~~l~~~L~~~ 340 (424)
T 2e7u_A 301 GNPLAMAAGLATLELLEE---NPGYYAYLEDLGARLEAGLKEV 340 (424)
T ss_dssp SCHHHHHHHHHHHHHHHH---CTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHH
Confidence 456777788888887754 2456677777777777777664
No 227
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.48 E-value=7.5e-14 Score=126.55 Aligned_cols=224 Identities=11% Similarity=0.000 Sum_probs=133.7
Q ss_pred CCccCCCchhH-----HHHHHHHHHHHHHHcCC--CCCCCcceEEecCChH-HHHHHHHHhcCCCC----eEEEecCCCC
Q 022463 18 GARYYGGNEYI-----DMAESLCQKRALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHD----RIMALDLPHG 85 (297)
Q Consensus 18 ~~~~~~~~~~~-----~~~e~~~~~~la~~~g~--~~~~~~~~v~~~sG~~-~~~~~~~~~~~~gd----~Vl~~~~~~~ 85 (297)
+...|+..... .++++.+.+++. ..|. ++++ +|++|+|++ ++..++.+++++|| +|+++.++|.
T Consensus 55 ~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~---~i~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~ 130 (391)
T 3bwn_A 55 LMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDR---YIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYS 130 (391)
T ss_dssp TCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSS---EEEEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCT
T ss_pred hhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCC---eEEEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCch
Confidence 34456655555 788855555554 2333 3322 499999984 66668888899999 9999998777
Q ss_pred CcccccccccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCE
Q 022463 86 GHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAI 163 (297)
Q Consensus 86 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~ 163 (297)
+...... ..|..+..+ +.|.+. ++ .+ ++++|++ +++| +|.+.+ +|.+.++.++++
T Consensus 131 ~~~~~~~--------~~g~~~~~~--~~d~~~--l~--------~~-~~k~v~l~~p~NPtG~~~~--~l~~~~~~~~~~ 187 (391)
T 3bwn_A 131 TYVEETT--------YVRSGMYKW--EGDAWG--FD--------KK-GPYIELVTSPNNPDGTIRE--TVVNRPDDDEAK 187 (391)
T ss_dssp HHHHHHH--------TTCBTTEEE--EEESTT--CC--------CC-SCEEEEEESSCTTTCCCCC--CCC-----CCCE
T ss_pred hHHHHHH--------HcCCeEEEe--cCCHHH--cC--------CC-CCEEEEECCCCCCCchhHH--HHHHHhhcCCCE
Confidence 6543222 223223333 333221 22 23 7899888 7888 897775 444322223399
Q ss_pred EEEehhhhcccccccCCCCCCCCccEEEecCCccCCC--CCceEEEE-ecCchhhccCCccchhhHHHHhhhcccCCCCC
Q 022463 164 MLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRG--PRGAMIFF-RKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240 (297)
Q Consensus 164 livD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~g--p~gG~i~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 240 (297)
+|+|++++.+... .+.. ..+.++++.|+||.++. .+-|++++ +++ +.+.+...... ...
T Consensus 188 ii~De~y~~~~~~-~l~~--~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~--------------l~~~l~~~~~~-~~~ 249 (391)
T 3bwn_A 188 VIHDFAYYWPHYT-PITR--RQDHDIMLFTFSKITGHAGSRIGWALVKDKE--------------VAKKMVEYIIV-NSI 249 (391)
T ss_dssp EEEECTTCSTTTS-CCCC--CBCCSEEEEEHHHHHSCGGGCEEEEEECCHH--------------HHHHHHHHHHH-HHS
T ss_pred EEEeCCCCCCCCC-cccc--CCCCeEEEEechhhcCCCccceEEEEecCHH--------------HHHHHHHHhcc-ccc
Confidence 9999998742110 1111 12568999999997632 22399987 553 33333222110 012
Q ss_pred CCchHHHHHHHHHHHHHh---------hhcChhhHHHHhhhhHHHHHhhccCCCCc
Q 022463 241 GPHNHTITGLAVALKQVC---------TLITFSHIHVFSLHVYPAFVSNQNNSENI 287 (297)
Q Consensus 241 t~~~~~~~al~~al~~~~---------~~~g~~~~~~~~~~l~~~l~~~l~~~~~~ 287 (297)
+++.+...++..+|+... +. .+++++++.++..+++.+.|++.+.+
T Consensus 250 ~~~~~~q~a~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~ 304 (391)
T 3bwn_A 250 GVSKESQVRTAKILNVLKETCKSESESEN-FFKYGREMMKNRWEKLREVVKESDAF 304 (391)
T ss_dssp SCCHHHHHHHHHHHHHHHHHTTCCCTTTS-HHHHHHHHHHHHHHHHHHHHHTCSSE
T ss_pred CCCHHHHHHHHHHHhCcchhccccccHHH-HHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 445566666666776532 23 57778888888999999999887643
No 228
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.47 E-value=3.4e-12 Score=116.20 Aligned_cols=178 Identities=13% Similarity=0.143 Sum_probs=112.7
Q ss_pred CCccCCCchhHHHHHHHHHHHHHHHcCC--CCCCCcceEEecCCh-HHHHHHHHHhcC--CCCeEEEecCCCCCcccccc
Q 022463 18 GARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGS-PSNFQVYTALLK--PHDRIMALDLPHGGHLSHGY 92 (297)
Q Consensus 18 ~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~~v~~~sG~-~~~~~~~~~~~~--~gd~Vl~~~~~~~~~~~~~~ 92 (297)
+...|+...+..++++.+.+++.+..+. ++++ ..+++|+|+ .+...++..++. | |+|+++++.++.+..
T Consensus 64 ~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~--i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~--- 137 (405)
T 3k7y_A 64 KEKPYLLGNGTEDFSTLTQNLIFGNNSKYIEDKK--ICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVN--- 137 (405)
T ss_dssp CCCCCCTTSSCHHHHHHHHHHHHCSSCTTTTTTC--EEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHH---
T ss_pred CCCCCCCCCCcHHHHHHHHHHHcCCCCccccccc--eEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHH---
Confidence 3445666677888997777776544433 2232 235777787 466556777766 8 999999866555533
Q ss_pred cccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhc-CCcEEEEc-C-CC-CCCccc---HHHHHHHHHhcCCEEE
Q 022463 93 QTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-RPKLIVAG-A-SA-YARLYD---YERIRKVCNKQKAIML 165 (297)
Q Consensus 93 ~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~-~~~~v~~~-~-~~-~G~~~~---~~~i~~la~~~g~~li 165 (297)
.++..|..+..+++. +++++.+|++.+++.+++. ++++++++ + +| +|.+.+ +++|.++|++|++++|
T Consensus 138 -----~~~~~g~~~~~v~~~-~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi 211 (405)
T 3k7y_A 138 -----MIESRGFNLKYINFF-DYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVII 211 (405)
T ss_dssp -----HHHTTTCEEEEECCE-ETTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEE
T ss_pred -----HHHHcCCeEEEEecc-ccccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEE
Confidence 233444444444431 3346889999999999852 45788884 3 57 897766 4578888999999999
Q ss_pred EehhhhcccccccCCC--CC---C-C-C-ccEEEecCCccCC--CCCceEEEE
Q 022463 166 ADMAHISGLVAAGVIP--SP---F-E-Y-ADVVTTTTHKSLR--GPRGAMIFF 208 (297)
Q Consensus 166 vD~a~~~g~~~~~~~~--~~---~-~-~-~D~~~~s~~K~l~--gp~gG~i~~ 208 (297)
+|+++.- ....+... .+ + . + -=+++.|++|+++ |-+-|++++
T Consensus 212 ~De~Y~~-l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~ 263 (405)
T 3k7y_A 212 FDIAYQG-FGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSLYGERAGALHI 263 (405)
T ss_dssp EEESCTT-TSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCCTTTTEEEEEE
T ss_pred EecCccc-ccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCCccccceEEEE
Confidence 9998642 11111000 00 0 0 1 1266789999874 455598864
No 229
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.47 E-value=1.5e-12 Score=119.68 Aligned_cols=222 Identities=13% Similarity=0.053 Sum_probs=128.0
Q ss_pred HHHHHHcCCCCCCCcceEEecCChHHHHHHHHHh--cCCCCeEEEecCCCCCccccc-ccccccccceeeeeeEeeeccc
Q 022463 37 KRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL--LKPHDRIMALDLPHGGHLSHG-YQTDTKKISAVSIFFETMPYRL 113 (297)
Q Consensus 37 ~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~--~~~gd~Vl~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~v~~~~ 113 (297)
+++++.+..-. . ..+.+||+.+|+.+++.. ....++|+.....|++..... .......+. .....++.
T Consensus 134 e~l~~~~p~~~-~---v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~-----~~~~~~p~ 204 (454)
T 4ao9_A 134 RLICERFPQIE-Q---LRFTNSGTEANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVP-----FDFLVLPY 204 (454)
T ss_dssp HHHHHHSTTCS-E---EEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCC-----SEEEEECT
T ss_pred HHHHHhCCCCC-E---EEEeCchHHHHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCC-----CCcccCCC
Confidence 67777775322 1 244468888888777654 234567777776655432211 111111111 12222233
Q ss_pred CCCCCcCCHHHHHHHhhhc--CCcEEEEc--CCCCCCccc----HHHHHHHHHhcCCEEEEehhhhcccccccC----CC
Q 022463 114 NESTGYIDYDQLEKSATLF--RPKLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV----IP 181 (297)
Q Consensus 114 ~~~~~~~d~~~l~~~l~~~--~~~~v~~~--~~~~G~~~~----~~~i~~la~~~g~~livD~a~~~g~~~~~~----~~ 181 (297)
-|++.+++.+.++ ++.+|++- ..+.|.+.| +++|+++|++||+++|+|++|+ |-..... ..
T Consensus 205 ------nd~~~l~~~l~~~~~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~t-GR~G~~~a~e~~g 277 (454)
T 4ao9_A 205 ------NDAQTARAQIERHGPEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMT-SRLAPHGLANKLG 277 (454)
T ss_dssp ------TCHHHHHHHHHHTGGGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTG-GGGSTTCHHHHHT
T ss_pred ------chHHHHHHHHhhcCCceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCc-CCCccccchhccC
Confidence 3788999998763 35667762 344676666 8899999999999999999986 4221110 00
Q ss_pred CCCCCccEEEecCCccCCCCCc-eEEEEecCchhhccCCccchhhHHHHhhhcccCCC-CC--CCchHHHHHHHHHHHHH
Q 022463 182 SPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGL-QG--GPHNHTITGLAVALKQV 257 (297)
Q Consensus 182 ~~~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~--t~~~~~~~al~~al~~~ 257 (297)
. .+|+++++ |.++|... |++.++++ ..+.+.+...+.. .+ +-+...+++..++|+.+
T Consensus 278 v---~PDi~t~g--K~lggG~Piga~~~~~e--------------i~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l 338 (454)
T 4ao9_A 278 I---RSDLTTLG--KYIGGGMSFGAFGGRAD--------------VMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKL 338 (454)
T ss_dssp C---CCSEEEEE--GGGGTTSSCEEEEECHH--------------HHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHT
T ss_pred C---CCcEEEec--cccCCCCcceeeeeHHH--------------HHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHH
Confidence 1 36998887 88876444 78888873 4444433211111 22 23557777778888888
Q ss_pred hhhcChhhHHHHhhhhHHHHHhhccCCCCcccccCC
Q 022463 258 CTLITFSHIHVFSLHVYPAFVSNQNNSENIEEDKGR 293 (297)
Q Consensus 258 ~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~~~g~ 293 (297)
.++.-++++.++...+.+.|.+.+++.+.+.+++|.
T Consensus 339 ~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~ 374 (454)
T 4ao9_A 339 FTPEAAGALAERGEALRARLNALCANEGVAMQFTGI 374 (454)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHTBSCEEEEE
T ss_pred hccChhHHHHHHHHHHHHHHHHHHhhCCCCEEEeee
Confidence 765234444554445555554444445555555553
No 230
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.37 E-value=1.4e-11 Score=114.28 Aligned_cols=139 Identities=12% Similarity=0.077 Sum_probs=86.0
Q ss_pred CHHHHHHHhhhc-----CCcEEEE-c-CCCCCCccc----HHHHHHHHHhcCCEEEEehhhh-cccccc--cCCCCCCC-
Q 022463 121 DYDQLEKSATLF-----RPKLIVA-G-ASAYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFE- 185 (297)
Q Consensus 121 d~~~l~~~l~~~-----~~~~v~~-~-~~~~G~~~~----~~~i~~la~~~g~~livD~a~~-~g~~~~--~~~~~~~~- 185 (297)
|+++|++.++++ ++++|++ . .+++|.+.| +++|.++|++||+++|+|++|+ .|.... ........
T Consensus 241 d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~ 320 (472)
T 1ohv_A 241 CLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDD 320 (472)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSS
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCCC
Confidence 688999999762 6788888 3 334787777 9999999999999999999997 332211 11111000
Q ss_pred CccEEEecCCccCCCCCceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHHHHHHHHhhhcChhh
Q 022463 186 YADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSH 265 (297)
Q Consensus 186 ~~D~~~~s~~K~l~gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~g~~~ 265 (297)
.+|++++| |++.| ||+++ +++ +. .+..... ....+.+....+++.++|+.+.+. +
T Consensus 321 ~~Di~t~s--K~~l~--GG~~~-~~~--------------~~-~~~~~~~-~~T~~~~~~~~aaa~aal~~~~~~-~--- 375 (472)
T 1ohv_A 321 PADVMTFS--KKMMT--GGFFH-KEE--------------FR-PNAPYRI-FNTWLGDPSKNLLLAEVINIIKRE-D--- 375 (472)
T ss_dssp CCSEEEEC--GGGSS--EEEEE-CGG--------------GS-CSSSSSS-CCSSSSCHHHHHHHHHHHHHHHHT-T---
T ss_pred CCCEEEEc--ccccc--CCccC-chh--------------hc-ccccccc-cCccCccHHHHHHHHHHHHHHHhC-C---
Confidence 17888766 98412 47665 442 10 0111100 112234567777778889888654 3
Q ss_pred HHHHhhhhHHHHHhhccCC
Q 022463 266 IHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 266 ~~~~~~~l~~~l~~~l~~~ 284 (297)
+.++.+++.+++.++|+++
T Consensus 376 ~~~~~~~~~~~l~~~L~~l 394 (472)
T 1ohv_A 376 LLSNAAHAGKVLLTGLLDL 394 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4566666667776666654
No 231
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.05 E-value=6.3e-14 Score=129.55 Aligned_cols=215 Identities=15% Similarity=0.043 Sum_probs=124.9
Q ss_pred HHHHHHHHHcCCCCCCCcceEEecCChHHHHHHHHHh--cCCCCeEEEecCCCCCcccccccccccccceeeeeeEeeec
Q 022463 34 LCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 111 (297)
Q Consensus 34 ~~~~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 111 (297)
+..++|+++++ ..+. .++++||+.++..+++.. ...++.|++.+..+++...... . +....|.....+++
T Consensus 144 ~Lae~L~~~~p-~~~~---v~~~nSGseA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~-s---g~~~~g~~~~~~~~ 215 (465)
T 2yky_A 144 LFAEAVCDRFP-SIDL---VRFTNSGTEANLMALATATAITGRKTVLAFDGGYHGGLLNFA-S---GHAPTNAPYHVVLG 215 (465)
Confidence 34488888884 2222 355677888888777654 2456888888766554322111 0 00011110012222
Q ss_pred ccCCCCCcCCHHHHHHHhhh--cCCcEEEEc--CCCCCCccc----HHHHHHHHHhcCCEEEEehhhhcccccccCCCCC
Q 022463 112 RLNESTGYIDYDQLEKSATL--FRPKLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 183 (297)
Q Consensus 112 ~~~~~~~~~d~~~l~~~l~~--~~~~~v~~~--~~~~G~~~~----~~~i~~la~~~g~~livD~a~~~g~~~~~~~~~~ 183 (297)
+. .|++.|++++++ .++++|++. .+|+|...| +++|.++|++||+++|+|++++ + .........
T Consensus 216 ~~------~d~~~l~~~l~~~~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~-r~g~~~a~~ 287 (465)
T 2yky_A 216 VY------NDVEGTADLLKRHGHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-S-RLSGGGAQE 287 (465)
Confidence 22 378899999873 278888883 345786666 8999999999999999999998 4 211110000
Q ss_pred -CC-CccEEEecCCccCCCCC-ceEEEEecCchhhccCCccchhhHHHHhhhc--c--cCCCCCCCchHHHHHHHHHHHH
Q 022463 184 -FE-YADVVTTTTHKSLRGPR-GAMIFFRKGVKEINKQGKEVFYDYEEKINQA--V--FPGLQGGPHNHTITGLAVALKQ 256 (297)
Q Consensus 184 -~~-~~D~~~~s~~K~l~gp~-gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~--~--~~~~~~t~~~~~~~al~~al~~ 256 (297)
+. .+|+++ ++|++++.- .|+++++++ +.+.+... . ....+.+.+...+++..++|+.
T Consensus 288 ~~gv~pDi~t--~sK~lg~G~piG~v~~~~~--------------i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~ 351 (465)
T 2yky_A 288 MLGISADLTT--LGKYIGGGMSFGAFGGRRD--------------LMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQ 351 (465)
Confidence 01 367665 559987632 288888874 33333320 0 0111223345666777788888
Q ss_pred HhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 257 VCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 257 ~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
+.+. + +.++..++.+++.++|+++
T Consensus 352 l~~~-~---~~~~~~~~~~~l~~~L~~~ 375 (465)
T 2yky_A 352 IYTR-Q---AASDLSASGDRFRANLNRI 375 (465)
Confidence 7654 2 4555556666666666554
No 232
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.32 E-value=1.8e-12 Score=118.78 Aligned_cols=215 Identities=9% Similarity=-0.085 Sum_probs=130.4
Q ss_pred HHHHHHHHHHHHHHHcC--CCCCCCcceEEecCChH-HHHHHHHHh--------cCCCCeEEEecCCCCCcccccccccc
Q 022463 28 IDMAESLCQKRALEAFR--LDPEKWGVNVQSLSGSP-SNFQVYTAL--------LKPHDRIMALDLPHGGHLSHGYQTDT 96 (297)
Q Consensus 28 ~~~~e~~~~~~la~~~g--~~~~~~~~~v~~~sG~~-~~~~~~~~~--------~~~gd~Vl~~~~~~~~~~~~~~~~~~ 96 (297)
..++++.+.+++.+..+ ++++ +|++++|++ ++..++.++ ++|||.|+++.+.|++......
T Consensus 102 ~~~lr~aia~~~~~~~~~~~~~~----~iv~t~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~---- 173 (427)
T 2hox_A 102 SFELEKTIKELHEVVGNAAAKDR----YIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTK---- 173 (427)
T ss_dssp CHHHHHHHHHHHHHHTCBCCTTC----EEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHH----
T ss_pred hHHHHHHHHHHHHHhCCcCCCCC----EEEEeCCHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHH----
Confidence 67888666666655433 4554 489999884 666688888 8999999999877765543222
Q ss_pred cccceeeeeeEeeecccCCCCCcCCHHHHHHHhhhcCCcEEEE-cCCC-CCCcccHHHHHHHHHhcCCEEEEehhhhccc
Q 022463 97 KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA-YARLYDYERIRKVCNKQKAIMLADMAHISGL 174 (297)
Q Consensus 97 ~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~-~~~~-~G~~~~~~~i~~la~~~g~~livD~a~~~g~ 174 (297)
..|..+ + .+.+|++.|++.+++ ++++|++ +++| +|.+.+ + +++ ++..++|+++....
T Consensus 174 ----~~g~~~--~-------~~~~d~~~l~~~~~~-~~k~v~l~~p~NPtG~~~~-~----~l~--~~~~i~d~~~~~~~ 232 (427)
T 2hox_A 174 ----YFDKKG--Y-------VWAGNAANYVNVSNP-EQYIEMVTSPNNPEGLLRH-A----VIK--GCKSIYDMVYYWPH 232 (427)
T ss_dssp ----HSCBTT--E-------EEEEEGGGGTTCSCG-GGEEEEEESSCTTTCCCCC-C----SST--TCEEEEECTTCSTT
T ss_pred ----HcCCee--e-------eecCCHHHHHHhhcC-CceEEEEcCCCCCcccccH-H----HHc--CCCEEEeecccCCC
Confidence 222111 1 124567788887776 7898888 7888 898888 4 233 56788998764211
Q ss_pred ccccCCCCCCCCccEEEecCCccCCCC--CceEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCchHHHHHHHH
Q 022463 175 VAAGVIPSPFEYADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAV 252 (297)
Q Consensus 175 ~~~~~~~~~~~~~D~~~~s~~K~l~gp--~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~ 252 (297)
.+. .... .+.|++++|++|.++.| +.|+++++++ ++.+.+....... ..+.+.+...++..
T Consensus 233 ~s~--~~~~-~~~~i~~~S~SK~~g~~G~RiG~~~~~~~-------------~l~~~l~~~~~~~-~~~~~~~~q~a~~~ 295 (427)
T 2hox_A 233 YTP--IKYK-ADEDILLFTMSKFTGHSGSRFGWALIKDE-------------SVYNNLLNYMTKN-TEGTPRETQLRSLK 295 (427)
T ss_dssp TSC--CCSC-BCCSEEEEEHHHHTSCGGGCCEEEEECCH-------------HHHHHHHHHHHHH-TSSCCHHHHHHHHH
T ss_pred CCc--cccC-CCceEEEEeChhcCCCCCceEEEEEECCH-------------HHHHHHHHHHHhc-CCCCCHHHHHHHHH
Confidence 111 1110 25789999999976433 3499998532 3333333221111 12234444444445
Q ss_pred HHHHHhh---------hcChhhHHHHhhhhHHHHHhhccCCCCcc
Q 022463 253 ALKQVCT---------LITFSHIHVFSLHVYPAFVSNQNNSENIE 288 (297)
Q Consensus 253 al~~~~~---------~~g~~~~~~~~~~l~~~l~~~l~~~~~~~ 288 (297)
+|+...+ ..-+++.+++.++..+++.+.|++++.++
T Consensus 296 ~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 340 (427)
T 2hox_A 296 VLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFS 340 (427)
T ss_dssp HHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEE
T ss_pred HhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCcc
Confidence 5554211 10234566777788889999998876543
No 233
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.26 E-value=7.7e-10 Score=101.92 Aligned_cols=232 Identities=12% Similarity=0.049 Sum_probs=121.5
Q ss_pred HHHHHHcCCCCCCCcceEEecCChHHHHHHHHHh--cCCCCeEEEecCCCCCcccccccc------cc--cccceeeeee
Q 022463 37 KRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQT------DT--KKISAVSIFF 106 (297)
Q Consensus 37 ~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~--~~~gd~Vl~~~~~~~~~~~~~~~~------~~--~~~~~~g~~~ 106 (297)
++|.+++..+..+ -.++++||+.++..+++.. ......|+.....|++........ .. .+....+ +
T Consensus 114 e~L~~~~p~~~~~--~v~f~~sGsEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~--~ 189 (456)
T 4atq_A 114 EQLNRLTPGDHAK--RTVLFNSGAEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPE--V 189 (456)
T ss_dssp HHHHHHSSCSSCE--EEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSS--E
T ss_pred HHHHHhCCCCCCc--EEEEeCChHHHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCcccc--c
Confidence 6777887654222 1245578888888776543 335567888777765543111000 00 0111111 2
Q ss_pred Eeeecc--cCCCC-CcCCHHHHHHHhh-------hcCCcEEEEcC--CCCCCcc----cHHHHHHHHHhcCCEEEEehhh
Q 022463 107 ETMPYR--LNEST-GYIDYDQLEKSAT-------LFRPKLIVAGA--SAYARLY----DYERIRKVCNKQKAIMLADMAH 170 (297)
Q Consensus 107 ~~v~~~--~~~~~-~~~d~~~l~~~l~-------~~~~~~v~~~~--~~~G~~~----~~~~i~~la~~~g~~livD~a~ 170 (297)
..+|.+ ..... ...+.+.++..++ ..++.+|++-+ .+-|... -+++|+++|++||+++|+|+.+
T Consensus 190 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~ 269 (456)
T 4atq_A 190 YRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQ 269 (456)
T ss_dssp EEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTT
T ss_pred eecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccc
Confidence 122222 11111 1223333333332 23566777732 2245443 3789999999999999999998
Q ss_pred hc-ccccc----cCCCCCCCCccEEEecCCccCCCCCc-eEEEEecCchhhccCCccchhhHHHHhhhcccCCCCCCCch
Q 022463 171 IS-GLVAA----GVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHN 244 (297)
Q Consensus 171 ~~-g~~~~----~~~~~~~~~~D~~~~s~~K~l~gp~g-G~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~ 244 (297)
+. |-... ..... .+|+++++ |.++|..- |+++++++ ..+.+......+ +.+-+.
T Consensus 270 tG~GRtG~~~a~e~~gv---~PDivt~g--K~lggg~P~~av~~~~~--------------i~~~~~~~~~~~-Tf~gnp 329 (456)
T 4atq_A 270 SGFCRTGEWFAVDHEGV---VPDIITMA--KGIAGGLPLSAITGRAD--------------LLDAVHPGGLGG-TYGGNP 329 (456)
T ss_dssp TTTTTTSSSSGGGGTTC---CCSEEEEC--GGGGTTSSCEEEEEEHH--------------HHTTSCTTSSCC-SSSSCH
T ss_pred cccCCccccccccccCC---CCchhhhh--hcccCcCCceeeEecHH--------------HHhcccccCCCC-CCCCCh
Confidence 64 21111 11111 46999988 88866433 77787773 333333222111 223356
Q ss_pred HHHHHHHHHHHHHhhhcC-hhhHHHHhhhhHHHHHhhccCC-----CCcccccCC
Q 022463 245 HTITGLAVALKQVCTLIT-FSHIHVFSLHVYPAFVSNQNNS-----ENIEEDKGR 293 (297)
Q Consensus 245 ~~~~al~~al~~~~~~~g-~~~~~~~~~~l~~~l~~~l~~~-----~~~~~~~g~ 293 (297)
..+++..++|+.+.++ + ++++.+....+.+.|.+..+++ +.|.+++|+
T Consensus 330 la~aaala~L~~i~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~VRG~ 383 (456)
T 4atq_A 330 VACAAALAAIDTMEQH-DLNGRARHIEELALGKLRELAAELSAGGGSVVGDIRGR 383 (456)
T ss_dssp HHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEEEE
T ss_pred HHHHhhHHHHHHHhhc-cHHHHHHHHHHHHHHHHHHHHHhcccccCCceEEeeec
Confidence 7888888999988876 4 2333333333333333333332 457777764
No 234
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.08 E-value=3.7e-10 Score=103.04 Aligned_cols=243 Identities=12% Similarity=0.021 Sum_probs=127.3
Q ss_pred CccCCCchhHHHHHHHHHHHHHHHcCCC--CCCCcceEEecCChHHHHHHH----HHhcCCCCeEEEecCCCCCcccccc
Q 022463 19 ARYYGGNEYIDMAESLCQKRALEAFRLD--PEKWGVNVQSLSGSPSNFQVY----TALLKPHDRIMALDLPHGGHLSHGY 92 (297)
Q Consensus 19 ~~~~~~~~~~~~~e~~~~~~la~~~g~~--~~~~~~~v~~~sG~~~~~~~~----~~~~~~gd~Vl~~~~~~~~~~~~~~ 92 (297)
...|....+..++++.+.+.+ +|-+ .... ..+...+|+.+...++ +.++.|||+|+++++.++.+.....
T Consensus 80 ~~~Y~p~~G~p~lr~aia~~~---~g~~~~~~~~-~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~ 155 (420)
T 4h51_A 80 DYEYLPISGYQPFIDEAVKII---YGNTVELENL-VAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVK 155 (420)
T ss_dssp CCCCCCTTCCHHHHHHHHHHH---HC---CGGGE-EEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHH
T ss_pred CCCCCCcCChHHHHHHHHHHh---cCCCcccccc-ceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHH
Confidence 344666677888886665543 3332 1110 1222334444333222 3345799999999977766543222
Q ss_pred cccccccceeeee-eEeeecccCCCCCcCCHHHHHHHhhhc--CCcEEEE-cCCC-CCCcc---cHHHHHHHHHhcCCEE
Q 022463 93 QTDTKKISAVSIF-FETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVA-GASA-YARLY---DYERIRKVCNKQKAIM 164 (297)
Q Consensus 93 ~~~~~~~~~~g~~-~~~v~~~~~~~~~~~d~~~l~~~l~~~--~~~~v~~-~~~~-~G~~~---~~~~i~~la~~~g~~l 164 (297)
..|.. +...+ ..++++..+|.+.+.+.+... ++++++. +++| +|... .+++|.++|+++++++
T Consensus 156 --------~aG~~~V~~~~-~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~ 226 (420)
T 4h51_A 156 --------AAGWKNICTYA-YYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQV 226 (420)
T ss_dssp --------HTTCCCEEEEE-CEEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEE
T ss_pred --------HcCCeEEEeec-cccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceE
Confidence 22222 22222 234356788999998888642 3445555 4777 88655 4668999999999999
Q ss_pred EEehhhhcccccccCCCCCC------C--CccEEEecCCccCC--CCCceEEEEecCchhhccCCccchhhHHHHhhhcc
Q 022463 165 LADMAHISGLVAAGVIPSPF------E--YADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV 234 (297)
Q Consensus 165 ivD~a~~~g~~~~~~~~~~~------~--~~D~~~~s~~K~l~--gp~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 234 (297)
++|+++. +....+....++ + .-=+++.|++|.++ |-+-|++++..+..... ......+....
T Consensus 227 ~~D~~Y~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~-------~~~~~~l~~~~ 298 (420)
T 4h51_A 227 FFDSAYQ-GYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKR-------ADVKSVMDSLI 298 (420)
T ss_dssp EEEESCT-TTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHH-------HHHHHHHHHHH
T ss_pred eeehhhh-hhccCCcccchHHHHhHHhhCceEEEEeccccccccccCceEEEEecccCHHHH-------HHHHHHHHHhh
Confidence 9999853 222111100000 0 11266789999763 33349888876431000 00111111111
Q ss_pred cCCCCCCCchHHHHHHHHHHHH-----HhhhcChhhHHHHhhhhHHHHHhhccCC
Q 022463 235 FPGLQGGPHNHTITGLAVALKQ-----VCTLITFSHIHVFSLHVYPAFVSNQNNS 284 (297)
Q Consensus 235 ~~~~~~t~~~~~~~al~~al~~-----~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 284 (297)
.. ..+.++..........+.. ..+. -++.++++.+..++.+.+.|++.
T Consensus 299 r~-~~s~~p~~~a~~~~~~l~d~~l~~~~~~-~~~~m~~r~~~~R~~l~~~L~~~ 351 (420)
T 4h51_A 299 RE-EYTCPPAHGARLAHLILSNNELRKEWEA-ELSAMAERIRTMRRTVYDELLRL 351 (420)
T ss_dssp HT-TTSSCCHHHHHHHHHHHHSHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hc-ccCcchHHHHHHHHHHhcCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHh
Confidence 11 1234444443333333321 1112 35566677777777777777654
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.05 E-value=2.2e-08 Score=92.61 Aligned_cols=231 Identities=14% Similarity=0.090 Sum_probs=122.9
Q ss_pred HHHHHHcCCCCCCCcceEEecCChHHHHHHHHHhc-------CC-CCeEEEecCCCCCccc-ccccc-----ccccccee
Q 022463 37 KRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALL-------KP-HDRIMALDLPHGGHLS-HGYQT-----DTKKISAV 102 (297)
Q Consensus 37 ~~la~~~g~~~~~~~~~v~~~sG~~~~~~~~~~~~-------~~-gd~Vl~~~~~~~~~~~-~~~~~-----~~~~~~~~ 102 (297)
++|.+++..+.+. ..+.+||++++..+++... ++ ...|+.....|++... ..... ...+.-+.
T Consensus 118 e~L~~~~p~~~~~---v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~ 194 (473)
T 4e3q_A 118 EKLVEVSPFDSGR---VFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLP 194 (473)
T ss_dssp HHHHHHSSCSSCE---EEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCT
T ss_pred HHHHhhCCCCccE---EEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCC
Confidence 6777777655432 2344677888887776432 23 3567777766555321 11000 00011111
Q ss_pred eeeeEeeecc----cCCCCCc-------CCHHHHHHHhhhc---CCcEEEEcC--CCCCCcc----cHHHHHHHHHhcCC
Q 022463 103 SIFFETMPYR----LNESTGY-------IDYDQLEKSATLF---RPKLIVAGA--SAYARLY----DYERIRKVCNKQKA 162 (297)
Q Consensus 103 g~~~~~v~~~----~~~~~~~-------~d~~~l~~~l~~~---~~~~v~~~~--~~~G~~~----~~~~i~~la~~~g~ 162 (297)
+ +..++.+ .. ..+. ...+++++.+.+. ++.+|++-+ .+-|... -+++|+++|++||+
T Consensus 195 ~--~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gi 271 (473)
T 4e3q_A 195 G--FVHLTCPHYWRYG-EEGETEEQFVARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDI 271 (473)
T ss_dssp T--EEEECCCCHHHHS-CTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTC
T ss_pred c--ccccCCCcccccc-cccchhhHHHHHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccce
Confidence 1 1112211 11 1111 1124455555432 345666632 2235333 37899999999999
Q ss_pred EEEEehhhhcc-ccc----ccCCCCCCCCccEEEecCCccCCCC--CceEEEEecCchhhccCCccchhhHHHHhhhc--
Q 022463 163 IMLADMAHISG-LVA----AGVIPSPFEYADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQA-- 233 (297)
Q Consensus 163 ~livD~a~~~g-~~~----~~~~~~~~~~~D~~~~s~~K~l~gp--~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~-- 233 (297)
++|.|+.++.- -.. ...... .+|+++++ |.|+|. +-|+++++++ ..+.+...
T Consensus 272 lLI~DEV~tGfGRtG~~fa~e~~gv---~PDi~t~~--K~l~gG~~Pl~av~~~~~--------------i~~~~~~~~~ 332 (473)
T 4e3q_A 272 PVISDEVICGFGRTGNTWGCVTYDF---TPDAIISS--KNLTAGFFPMGAVILGPE--------------LSKRLETAIE 332 (473)
T ss_dssp CEEEECTTTSSSTTSSSCHHHHTTC---CCSEEEEC--GGGGTTSSCCEEEEECHH--------------HHHHHHHHHH
T ss_pred EEeccCccccCCcccchhHHHhcCC---CCChHHhc--ccccCCCCCcccccccHH--------------HHHHhccccc
Confidence 99999998631 111 000111 46999887 988664 3388888884 33333211
Q ss_pred -ccC---CCCCCCchHHHHHHHHHHHHHhhhcChhhHHHHhhhhHHHHHhhccCCCCcccccCC
Q 022463 234 -VFP---GLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIEEDKGR 293 (297)
Q Consensus 234 -~~~---~~~~t~~~~~~~al~~al~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~~~g~ 293 (297)
..+ +.+.+-+...+++..++|+.+.++.-++++.+....+.+.|.+ |.+.+.|.+++|+
T Consensus 333 ~~~~~~hg~T~~Gnpla~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~-l~~~~~v~~vRG~ 395 (473)
T 4e3q_A 333 AIEEFPHGFTASGHPVGCAIALKAIDVVMNEGLAENVRRLAPRFEERLKH-IAERPNIGEYRGI 395 (473)
T ss_dssp HHSCCCCCCTTTTCHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHH-HTTSTTEEEEEEE
T ss_pred cccccccCCCCCCCcchhhhhhhhhhhhccccHHHHHHHHHHHHHHHHHH-HhcCCCeeEEeec
Confidence 011 1122345677888888999888772245555555555555543 5556778777764
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=98.83 E-value=2.7e-08 Score=97.97 Aligned_cols=153 Identities=11% Similarity=0.020 Sum_probs=89.1
Q ss_pred HHHHHHhhh-------cCCcEEEEcC--CCC-CCccc----HHHHHHHHHhcCCEEEEehhhh-cccccccCCCC-CCC-
Q 022463 123 DQLEKSATL-------FRPKLIVAGA--SAY-ARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGVIPS-PFE- 185 (297)
Q Consensus 123 ~~l~~~l~~-------~~~~~v~~~~--~~~-G~~~~----~~~i~~la~~~g~~livD~a~~-~g~~~~~~~~~-~~~- 185 (297)
+.|++.|.+ .++.+|++-+ .+. |...+ +++|+++|++||+++|+|++++ +|-... .... .+.
T Consensus 577 ~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~-~fa~e~~gv 655 (831)
T 4a0g_A 577 AYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGV-ETTTELLGC 655 (831)
T ss_dssp HHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSB-SSTHHHHSS
T ss_pred HHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCC-chhhHhcCC
Confidence 567777752 2356666633 343 44443 8899999999999999999875 222111 1000 000
Q ss_pred CccEEEecCCccCCCC--CceEEEEecCchhhccCCccchhhHHHHhhhcc-----cCCCCCCCchHHHHHHHHHHHHHh
Q 022463 186 YADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV-----FPGLQGGPHNHTITGLAVALKQVC 258 (297)
Q Consensus 186 ~~D~~~~s~~K~l~gp--~gG~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~~~t~~~~~~~al~~al~~~~ 258 (297)
..|+++++ |.|+|. +-|+++++++ +.+.+.... .-+.+.+.+...+++..++|+.+.
T Consensus 656 ~PDiitls--K~L~gG~~Plgav~~~~~--------------i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~ 719 (831)
T 4a0g_A 656 KPDIACFA--KLLTGGMVPLAVTLATDA--------------VFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFK 719 (831)
T ss_dssp CCSEEEEC--GGGGTTSSCCEEEEECHH--------------HHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEe--cccccCccCcEEEEECHH--------------HHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHH
Confidence 36888766 999773 2388888884 344333211 111133446678888889999987
Q ss_pred hhcChhhHHHHhhhh----HHHHHhhccCCCCcccccC
Q 022463 259 TLITFSHIHVFSLHV----YPAFVSNQNNSENIEEDKG 292 (297)
Q Consensus 259 ~~~g~~~~~~~~~~l----~~~l~~~l~~~~~~~~~~g 292 (297)
++.-.+++.+....+ .+.+.+.+++.+.|.+++|
T Consensus 720 ~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vrg 757 (831)
T 4a0g_A 720 DPETNHNITSQGKTLRELWDEELVQQISSHSAVQRVVV 757 (831)
T ss_dssp CTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEEEE
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeEee
Confidence 662233333333333 3345566667777777665
No 237
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=62.52 E-value=3.6 Score=37.18 Aligned_cols=28 Identities=11% Similarity=0.230 Sum_probs=25.4
Q ss_pred CCCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 142 SAYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 142 ~~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
+.+|+..+++++.+-||++|+.||+|.+
T Consensus 71 ~~~Gt~~df~~lv~~aH~~Gi~VilD~V 98 (496)
T 4gqr_A 71 TRSGNEDEFRNMVTRCNNVGVRIYVDAV 98 (496)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 3478889999999999999999999986
No 238
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=59.32 E-value=28 Score=25.14 Aligned_cols=50 Identities=8% Similarity=-0.057 Sum_probs=36.8
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
.+++++++..+.. +|.+++++.-..+...+..++.+..+++|+-+-+-.+
T Consensus 48 ~l~~~~l~~ll~~-~~evliiGtG~~~~~~~~~~~~~~l~~~gI~ve~m~T 97 (122)
T 2ab1_A 48 GVQPADVKEVVEK-GVQTLVIGRGMSEALKVPSSTVEYLKKHGIDVRVLQT 97 (122)
T ss_dssp CCCHHHHHHHHTT-CCSEEEEEECSSCCSCCCHHHHHHHHHTTCEEEEECH
T ss_pred HCCHHHHHHHhhC-CCCEEEECCCCCCccCCCHHHHHHHHHcCCEEEEeCH
Confidence 5788999999887 8999999533334333457889999999987665443
No 239
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=57.31 E-value=17 Score=27.70 Aligned_cols=50 Identities=12% Similarity=-0.068 Sum_probs=37.8
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcC---CEEEEeh
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK---AIMLADM 168 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g---~~livD~ 168 (297)
..+++++.+.+.+.++++|.++..++.....+.++.+.+++.+ +++++=+
T Consensus 55 ~~p~e~lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vGG 107 (161)
T 2yxb_A 55 RQTPEQVAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVLGG 107 (161)
T ss_dssp BCCHHHHHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEEEE
T ss_pred CCCHHHHHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEEeC
Confidence 3578888888887799999997666667777888888888764 5566543
No 240
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=53.79 E-value=7.9 Score=26.09 Aligned_cols=18 Identities=17% Similarity=0.217 Sum_probs=16.9
Q ss_pred HHHHHHHHhcCCEEEEeh
Q 022463 151 ERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 151 ~~i~~la~~~g~~livD~ 168 (297)
++|.++|+++|++++.|-
T Consensus 30 ~~I~~~A~e~~VPi~e~~ 47 (83)
T 3bzy_B 30 LQIIKLAELYDIPVIEDI 47 (83)
T ss_dssp HHHHHHHHHTTCCEEECH
T ss_pred HHHHHHHHHcCCCEEeCH
Confidence 599999999999999996
No 241
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=53.57 E-value=6.8 Score=34.76 Aligned_cols=28 Identities=14% Similarity=0.229 Sum_probs=24.6
Q ss_pred CCCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 142 SAYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 142 ~~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
+.+|+..+++++.+.||++|+.||.|.+
T Consensus 63 ~~~Gt~~d~~~lv~~~h~~Gi~VilD~V 90 (405)
T 1ht6_A 63 SKYGNAAELKSLIGALHGKGVQAIADIV 90 (405)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4567788899999999999999999975
No 242
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=53.11 E-value=6.9 Score=35.09 Aligned_cols=27 Identities=7% Similarity=0.266 Sum_probs=24.2
Q ss_pred CCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 143 AYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 143 ~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
.+|+..+++++.+.||++|+.||+|.+
T Consensus 65 ~~Gt~~df~~lv~~aH~~Gi~VilD~V 91 (441)
T 1lwj_A 65 EYGSEREFKEMIEAFHDSGIKVVLDLP 91 (441)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 467888899999999999999999986
No 243
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=53.11 E-value=6.4 Score=35.44 Aligned_cols=28 Identities=11% Similarity=0.107 Sum_probs=25.2
Q ss_pred CCCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 142 SAYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 142 ~~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
+.+|+..+++++.+.||++|+.||.|.+
T Consensus 59 p~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 86 (448)
T 1g94_A 59 SRGGNRAQFIDMVNRCSAAGVDIYVDTL 86 (448)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3478889999999999999999999986
No 244
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=53.07 E-value=7 Score=35.53 Aligned_cols=27 Identities=7% Similarity=0.142 Sum_probs=24.7
Q ss_pred CCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 143 AYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 143 ~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
.+|+..+++++.+.||++|+.||+|.+
T Consensus 74 ~~Gt~~df~~lv~~aH~~Gi~VilD~V 100 (483)
T 3bh4_A 74 KYGTKSELQDAIGSLHSRNVQVYGDVV 100 (483)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 478888999999999999999999985
No 245
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=52.82 E-value=27 Score=27.56 Aligned_cols=51 Identities=8% Similarity=0.108 Sum_probs=39.5
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcC----CEEEEehh
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK----AIMLADMA 169 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g----~~livD~a 169 (297)
.++++++.+.+.+.+|++|.++..++.....+.++.+.+++.+ +++++=++
T Consensus 125 ~vp~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~~~v~vGG~ 179 (210)
T 1y80_A 125 DIEPGKFVEAVKKYQPDIVGMSALLTTTMMNMKSTIDALIAAGLRDRVKVIVGGA 179 (210)
T ss_dssp SBCHHHHHHHHHHHCCSEEEEECCSGGGTHHHHHHHHHHHHTTCGGGCEEEEEST
T ss_pred CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEECC
Confidence 4678999988887799999997666666677888888888765 77877554
No 246
>1n8f_A DAHP synthetase; (beta/alpha)8 barrel, metal binding protein; HET: PEP; 1.75A {Escherichia coli} SCOP: c.1.10.4 PDB: 1gg1_A 1kfl_A* 1qr7_A*
Probab=52.75 E-value=16 Score=31.67 Aligned_cols=41 Identities=15% Similarity=0.231 Sum_probs=26.9
Q ss_pred CCcEEEE--cCC--CCCCcccHHHHHHHHHhcCCE--EEEehhhhccc
Q 022463 133 RPKLIVA--GAS--AYARLYDYERIRKVCNKQKAI--MLADMAHISGL 174 (297)
Q Consensus 133 ~~~~v~~--~~~--~~G~~~~~~~i~~la~~~g~~--livD~a~~~g~ 174 (297)
++.++++ +.. || ...++..+.+..++.+++ ||+|++|+.+.
T Consensus 226 N~~~~lilRG~~~~ny-~~~di~~~~~~l~~~~lp~~VivD~SH~ns~ 272 (350)
T 1n8f_A 226 NGDCHIILRGGKEPNY-SAKHVAEVKEGLNKAGLPAQVMIDFSHANSS 272 (350)
T ss_dssp CSCEEEEECCSSSCCC-SHHHHHHHHHHHHHTTCCCCEEEECSGGGTT
T ss_pred CCCEEEEECCCCCCCC-CHHHHHHHHHHHHHcCCCCeEEEECCCcccC
Confidence 4555555 322 22 444566666566777999 99999998754
No 247
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=52.33 E-value=7.3 Score=35.43 Aligned_cols=27 Identities=7% Similarity=0.094 Sum_probs=24.5
Q ss_pred CCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 143 AYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 143 ~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
.+|+..+++++.+.||++|+.||+|.+
T Consensus 78 ~~Gt~~df~~Lv~~aH~~Gi~VilD~V 104 (485)
T 1wpc_A 78 KYGTRSQLQAAVTSLKNNGIQVYGDVV 104 (485)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 378888999999999999999999985
No 248
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=52.15 E-value=7.4 Score=35.34 Aligned_cols=27 Identities=15% Similarity=0.160 Sum_probs=24.5
Q ss_pred CCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 143 AYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 143 ~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
.+|+..+++++.+.||++|+.||.|.+
T Consensus 76 ~~Gt~~df~~lv~~aH~~Gi~VilD~V 102 (480)
T 1ud2_A 76 KYGTKAQLERAIGSLKSNDINVYGDVV 102 (480)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 378888999999999999999999975
No 249
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=51.55 E-value=7.6 Score=35.69 Aligned_cols=28 Identities=14% Similarity=0.222 Sum_probs=25.2
Q ss_pred CCCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 142 SAYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 142 ~~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
+.+|+..+++++.+.||++|+.||+|.+
T Consensus 76 p~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 103 (515)
T 1hvx_A 76 TKYGTKAQYLQAIQAAHAAGMQVYADVV 103 (515)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3478889999999999999999999985
No 250
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=50.28 E-value=8.3 Score=34.57 Aligned_cols=28 Identities=11% Similarity=0.212 Sum_probs=25.0
Q ss_pred CCCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 142 SAYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 142 ~~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
+.+|+..+++++.+.||++|+.||+|.+
T Consensus 81 ~~~Gt~~df~~lv~~~H~~Gi~VilD~V 108 (435)
T 1mxg_A 81 TRFGSKEELVRLIQTAHAYGIKVIADVV 108 (435)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 3478888999999999999999999985
No 251
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=50.14 E-value=39 Score=29.75 Aligned_cols=54 Identities=15% Similarity=0.255 Sum_probs=39.3
Q ss_pred CCHHHHHHHhhh----cCCcEEEEc--CCCCC----CcccHHHHHHHHHhcCCEEEEehhhhcc
Q 022463 120 IDYDQLEKSATL----FRPKLIVAG--ASAYA----RLYDYERIRKVCNKQKAIMLADMAHISG 173 (297)
Q Consensus 120 ~d~~~l~~~l~~----~~~~~v~~~--~~~~G----~~~~~~~i~~la~~~g~~livD~a~~~g 173 (297)
.+++++..++.. .+..+++++ .++|+ ...++..|..+.+..+++|++|.+|+.|
T Consensus 260 ~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~lpV~~D~th~~G 323 (385)
T 3nvt_A 260 ATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKETHLPVMVDVTHSTG 323 (385)
T ss_dssp CCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEEEHHHHHC
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHhcCCCEEEcCCCCCC
Confidence 677777766542 346777773 44453 3457888888888899999999999876
No 252
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=49.70 E-value=35 Score=24.52 Aligned_cols=46 Identities=7% Similarity=0.174 Sum_probs=29.5
Q ss_pred CCHHHHHHHhhh--------cCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEE
Q 022463 120 IDYDQLEKSATL--------FRPKLIVAGASAYARLYDYERIRKVCNKQKAIML 165 (297)
Q Consensus 120 ~d~~~l~~~l~~--------~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~li 165 (297)
.|++.+.+.|++ ++-.-|+++.+......++.++.++++++|+.++
T Consensus 25 ~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~~~~dl~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 25 AEPEVIRQALEDKIAQAPAFLKHAPVVINVSGLESPVNWPELHKIVTSTGLRII 78 (120)
T ss_dssp CCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEECCSSCCHHHHHHHHHTTTCEEE
T ss_pred CCHHHHHHHHHHHHHhChHhhCCCcEEEEccccCChHHHHHHHHHHHHcCCEEE
Confidence 467676666653 1234555532232245789999999999998763
No 253
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=49.23 E-value=9.6 Score=35.12 Aligned_cols=28 Identities=11% Similarity=0.093 Sum_probs=25.4
Q ss_pred CCCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 142 SAYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 142 ~~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
+.+|+..+++++.+.||++|+.||.|.+
T Consensus 87 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V 114 (527)
T 1gcy_A 87 GRYGSDAQLRQAASALGGAGVKVLYDVV 114 (527)
T ss_dssp SSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 4578889999999999999999999975
No 254
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=49.15 E-value=8.7 Score=34.80 Aligned_cols=29 Identities=10% Similarity=0.275 Sum_probs=25.8
Q ss_pred CCCCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 141 ASAYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 141 ~~~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
.+.+|+..+++++.+.||++|+.||+|.+
T Consensus 91 dp~~Gt~~df~~lv~~~H~~Gi~VilD~V 119 (478)
T 2guy_A 91 NENYGTADDLKALSSALHERGMYLMVDVV 119 (478)
T ss_dssp CTTSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 34578889999999999999999999985
No 255
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=48.75 E-value=9.2 Score=35.10 Aligned_cols=27 Identities=11% Similarity=0.341 Sum_probs=23.8
Q ss_pred CCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 143 AYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 143 ~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
.+|+..+++++.+.||++|+.||.|.+
T Consensus 75 ~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 101 (549)
T 4aie_A 75 QYGTMADMDELISKAKEHHIKIVMDLV 101 (549)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 356777899999999999999999985
No 256
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=48.28 E-value=54 Score=27.16 Aligned_cols=51 Identities=6% Similarity=0.179 Sum_probs=39.3
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCC---CcccHHHHHHHHHhcC----CEEEEehh
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYA---RLYDYERIRKVCNKQK----AIMLADMA 169 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G---~~~~~~~i~~la~~~g----~~livD~a 169 (297)
.+.++++.+++.+.++++|.++...+. ....+.++.+.+++.| +++++=++
T Consensus 166 ~vp~e~iv~aa~e~~~d~VglS~l~t~~~~~~~~~~~~i~~L~~~g~~~~i~vivGG~ 223 (262)
T 1xrs_B 166 QVANEDFIKKAVELEADVLLVSQTVTQKNVHIQNMTHLIELLEAEGLRDRFVLLCGGP 223 (262)
T ss_dssp SBCHHHHHHHHHHTTCSEEEEECCCCTTSHHHHHHHHHHHHHHHTTCGGGSEEEEECT
T ss_pred CCCHHHHHHHHHHcCCCEEEEEeecCCccchHHHHHHHHHHHHhcCCCCCCEEEEECC
Confidence 478899988888779999999755555 5667788888888766 77777655
No 257
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=48.04 E-value=47 Score=23.80 Aligned_cols=44 Identities=11% Similarity=0.069 Sum_probs=30.5
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEE
Q 022463 122 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 122 ~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~liv 166 (297)
.....+++...+.++|++. ++.....-...|..+|+++|++++.
T Consensus 25 ~~~v~kai~~gkakLViiA-~D~~~~~~~~~l~~lc~~~~VP~~~ 68 (121)
T 2lbw_A 25 VKEVVKALRKGEKGLVVIA-GDIWPADVISHIPVLCEDHSVPYIF 68 (121)
T ss_dssp HHHHHHHHHHSCCCEEEEC-TTCSCTTHHHHHHHHHHHTCCCEEE
T ss_pred HHHHHHHHHcCCceEEEEe-CCCCHHHHHHHHHHHHHhcCCcEEE
Confidence 4567788887688999982 1222222256788999999999754
No 258
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=47.54 E-value=14 Score=32.10 Aligned_cols=49 Identities=6% Similarity=-0.175 Sum_probs=40.9
Q ss_pred CcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEe
Q 022463 118 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 118 ~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD 167 (297)
..+|+..+..++.. ....+-++|.|+|....++++.+.|+++|+++.+-
T Consensus 91 iHf~~~lal~a~e~-G~dklRINPGNig~~~~~~~vv~~ak~~~~piRIG 139 (366)
T 3noy_A 91 IHFAPSYAFLSMEK-GVHGIRINPGNIGKEEIVREIVEEAKRRGVAVRIG 139 (366)
T ss_dssp CCSCHHHHHHHHHT-TCSEEEECHHHHSCHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCCHHHHHHHHHh-CCCeEEECCcccCchhHHHHHHHHHHHcCCCEEEe
Confidence 45788877777765 67788889999998778899999999999998884
No 259
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=47.31 E-value=8.3 Score=35.05 Aligned_cols=27 Identities=15% Similarity=0.448 Sum_probs=24.1
Q ss_pred CCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 143 AYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 143 ~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
.+|+..+++++.+.||++|+.||+|.+
T Consensus 77 ~~Gt~~d~~~Lv~~aH~~Gi~VilD~V 103 (488)
T 1wza_A 77 DYGTLEDFHKLVEAAHQRGIKVIIDLP 103 (488)
T ss_dssp GGCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 467788899999999999999999986
No 260
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=46.61 E-value=12 Score=25.83 Aligned_cols=18 Identities=22% Similarity=0.241 Sum_probs=16.8
Q ss_pred HHHHHHHHhcCCEEEEeh
Q 022463 151 ERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 151 ~~i~~la~~~g~~livD~ 168 (297)
.+|.++|+++|++++.|-
T Consensus 30 ~~I~e~A~e~gVPi~e~~ 47 (93)
T 2vt1_B 30 LAVRKYANEVGIPTVRDV 47 (93)
T ss_dssp HHHHHHHHHTTCCEEECH
T ss_pred HHHHHHHHHcCCCEEECH
Confidence 599999999999999996
No 261
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=46.56 E-value=11 Score=26.17 Aligned_cols=19 Identities=16% Similarity=0.235 Sum_probs=17.2
Q ss_pred HHHHHHHHhcCCEEEEehh
Q 022463 151 ERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 151 ~~i~~la~~~g~~livD~a 169 (297)
++|.++|+++|++++.|-.
T Consensus 45 ~~I~~~A~e~gVPi~e~~~ 63 (97)
T 3t7y_A 45 KRIIAEAEKYGVPIMRNVP 63 (97)
T ss_dssp HHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHcCCeEEECHH
Confidence 5899999999999999963
No 262
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=46.27 E-value=27 Score=27.48 Aligned_cols=43 Identities=14% Similarity=0.112 Sum_probs=34.3
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEe
Q 022463 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 121 d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD 167 (297)
|.++|++++.. ....+++- +|.+..++++.+.++++|-.+++.
T Consensus 18 ~~~~l~~al~s-~~~~ifll---~g~i~~l~~~v~~lk~~~K~v~Vh 60 (192)
T 3kts_A 18 NQKDMEKILEL-DLTYMVML---ETHVAQLKALVKYAQAGGKKVLLH 60 (192)
T ss_dssp SSHHHHHHTTS-SCCEEEEC---SEETTTHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHcC-CCCEEEEe---cCcHHHHHHHHHHHHHcCCeEEEe
Confidence 56889999987 67777773 466789999999999998776653
No 263
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=45.94 E-value=9.8 Score=34.54 Aligned_cols=29 Identities=7% Similarity=0.229 Sum_probs=25.8
Q ss_pred CCCCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 141 ASAYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 141 ~~~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
.+.+|+..+++++.+.||++|+.||.|.+
T Consensus 91 d~~~Gt~~df~~lv~~~H~~Gi~VilD~V 119 (484)
T 2aaa_A 91 NSNFGTADNLKSLSDALHARGMYLMVDVV 119 (484)
T ss_dssp CTTTCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 34578889999999999999999999986
No 264
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=45.79 E-value=9.6 Score=34.07 Aligned_cols=27 Identities=11% Similarity=0.346 Sum_probs=24.3
Q ss_pred CCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 143 AYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 143 ~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
.+|+..+++++.+.||++|+.||.|.+
T Consensus 77 ~~Gt~~d~~~lv~~ah~~Gi~vilD~V 103 (424)
T 2dh2_A 77 NFGSKEDFDSLLQSAKKKSIRVILDLT 103 (424)
T ss_dssp GGCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred cCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 367888999999999999999999975
No 265
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=45.57 E-value=49 Score=27.64 Aligned_cols=58 Identities=12% Similarity=0.183 Sum_probs=40.3
Q ss_pred CCc-CCHHHHHHHhhh----cCCcEEEEc--CCCC---C-CcccHHHHHHHHHhcCCEEEEehhhhccc
Q 022463 117 TGY-IDYDQLEKSATL----FRPKLIVAG--ASAY---A-RLYDYERIRKVCNKQKAIMLADMAHISGL 174 (297)
Q Consensus 117 ~~~-~d~~~l~~~l~~----~~~~~v~~~--~~~~---G-~~~~~~~i~~la~~~g~~livD~a~~~g~ 174 (297)
++. .++++++.++.. .++.+++++ .++| . ...++..|..+.+..+++|++|..|+.|.
T Consensus 152 ~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~~lpVi~dssH~~g~ 220 (276)
T 1vs1_A 152 RGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTLDVAAVAVLKEATHLPVIVDPSHPAGR 220 (276)
T ss_dssp CCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCBHHHHHHHHHHBSSCEEECCHHHHCS
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcchhCHHHHHHHHHHhCCCEEEeCCCCCCc
Confidence 344 378887776652 346777773 3233 2 45677888888777899999999999874
No 266
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=44.96 E-value=12 Score=26.02 Aligned_cols=18 Identities=17% Similarity=0.263 Sum_probs=16.8
Q ss_pred HHHHHHHHhcCCEEEEeh
Q 022463 151 ERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 151 ~~i~~la~~~g~~livD~ 168 (297)
.+|.++|+++|++++.|-
T Consensus 30 ~~I~e~A~e~gVPi~e~~ 47 (98)
T 3c01_E 30 LAVRAYAEKVGVPVIVDI 47 (98)
T ss_dssp HHHHHHHHHHTCCEEECH
T ss_pred HHHHHHHHHcCCCeecCH
Confidence 599999999999999996
No 267
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=44.46 E-value=10 Score=34.28 Aligned_cols=27 Identities=7% Similarity=0.033 Sum_probs=24.3
Q ss_pred CCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 143 AYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 143 ~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
.+|+..+++++.+.||++|+.||+|.+
T Consensus 92 ~~Gt~~df~~lv~~~h~~Gi~VilD~V 118 (475)
T 2z1k_A 92 ILGGNEALRHLLEVAHAHGVRVILDGV 118 (475)
T ss_dssp GGTCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 467888999999999999999999975
No 268
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=44.24 E-value=30 Score=30.17 Aligned_cols=51 Identities=10% Similarity=0.023 Sum_probs=43.1
Q ss_pred CcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEeh
Q 022463 118 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 118 ~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~ 168 (297)
...+++++++.+.....++|.+.....|......++.++|+++|+.+++=+
T Consensus 245 ~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 295 (379)
T 2rdx_A 245 CVTGLHMAQRIVADRGAEICCLKISNLGGLSKARRTRDFLIDNRMPVVAED 295 (379)
T ss_dssp TCCSHHHHHHHHHHTCCSEEEEETTTTTSHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEEee
Confidence 346788999999875678888877778999999999999999999888763
No 269
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=43.10 E-value=12 Score=35.13 Aligned_cols=25 Identities=16% Similarity=0.255 Sum_probs=21.9
Q ss_pred CCcccHHHHHHHHHhcCCEEEEehh
Q 022463 145 ARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 145 G~~~~~~~i~~la~~~g~~livD~a 169 (297)
|+..+++++.+.||++|+.||+|.+
T Consensus 196 Gt~~df~~Lv~~aH~~Gi~VilD~V 220 (601)
T 3edf_A 196 GSNEDFVRLSTEARKRGMGLIQDVV 220 (601)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEEC
Confidence 4556788999999999999999986
No 270
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=43.09 E-value=8.3 Score=34.94 Aligned_cols=27 Identities=11% Similarity=0.240 Sum_probs=24.2
Q ss_pred CCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 143 AYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 143 ~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
.+|+..+++++.+.||++|+.||+|.+
T Consensus 70 ~~Gt~~d~~~lv~~~h~~Gi~VilD~V 96 (471)
T 1jae_A 70 RSGDESAFTDMTRRCNDAGVRIYVDAV 96 (471)
T ss_dssp TTEEHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 367788899999999999999999975
No 271
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=43.03 E-value=12 Score=35.79 Aligned_cols=28 Identities=4% Similarity=0.237 Sum_probs=25.4
Q ss_pred CCCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 142 SAYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 142 ~~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
+.+|+..+++++.+.||++|+.||+|.+
T Consensus 102 p~~Gt~~df~~Lv~~aH~~GikVilD~V 129 (686)
T 1qho_A 102 EHFGNWTTFDTLVNDAHQNGIKVIVDFV 129 (686)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 4578889999999999999999999985
No 272
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=42.78 E-value=11 Score=33.90 Aligned_cols=26 Identities=15% Similarity=0.377 Sum_probs=23.0
Q ss_pred CCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 144 YARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 144 ~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
+|+..+++++.+.||++|+.||+|..
T Consensus 80 ~Gt~~~~~~lv~~~h~~Gi~vi~D~V 105 (449)
T 3dhu_A 80 YGTLADFKALTDRAHELGMKVMLDIV 105 (449)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 46677889999999999999999975
No 273
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=42.75 E-value=58 Score=23.61 Aligned_cols=44 Identities=5% Similarity=0.142 Sum_probs=30.3
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEE
Q 022463 122 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 122 ~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~liv 166 (297)
.....++++..+.++|++. ++.....-...|..+|++++++++.
T Consensus 29 ~~~v~Kai~~gka~LViiA-~D~~p~~~~~~i~~lc~~~~Ip~~~ 72 (126)
T 2xzm_U 29 LHEVLRTIEAKQALFVCVA-EDCDQGNYVKLVKALCAKNEIKYVS 72 (126)
T ss_dssp HHHHHHHHHHTCCSEEEEE-SSCCSTTHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHcCCceEEEEe-CCCChHHHHHHHHHHHHHhCCCEEE
Confidence 3466777777688899882 1222223347889999999999764
No 274
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=42.71 E-value=46 Score=27.54 Aligned_cols=54 Identities=17% Similarity=0.126 Sum_probs=38.5
Q ss_pred CHHHHHHHhh----hcCCcEEEEc----C-CCCC-CcccHHHHHHHHHhcCCEEEEehhhhccc
Q 022463 121 DYDQLEKSAT----LFRPKLIVAG----A-SAYA-RLYDYERIRKVCNKQKAIMLADMAHISGL 174 (297)
Q Consensus 121 d~~~l~~~l~----~~~~~~v~~~----~-~~~G-~~~~~~~i~~la~~~g~~livD~a~~~g~ 174 (297)
+++++..++. ..++.+++++ . ++|. ...++..+..+.+..++++|+|..|+.|.
T Consensus 142 t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~ 205 (262)
T 1zco_A 142 TIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGR 205 (262)
T ss_dssp CHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCS
T ss_pred CHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCc
Confidence 7888777664 2245677763 2 3443 44577888888888899999999998775
No 275
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=42.57 E-value=13 Score=34.45 Aligned_cols=26 Identities=19% Similarity=0.464 Sum_probs=23.3
Q ss_pred CCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 144 YARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 144 ~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
+|+..+++++.+.||++|+.||.|.+
T Consensus 76 ~Gt~~df~~Lv~~aH~~Gi~VilD~V 101 (557)
T 1zja_A 76 YGTMEDFDRLMAELKKRGMRLMVDVV 101 (557)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 56777899999999999999999986
No 276
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=42.53 E-value=33 Score=29.77 Aligned_cols=48 Identities=8% Similarity=0.142 Sum_probs=39.3
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEE
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~liv 166 (297)
..+++++++.+.....++|.+.....|.+.+..++.++|+++|+.+++
T Consensus 242 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~ 289 (368)
T 1sjd_A 242 IVSARAAADAIKLGAVQIVNIKPGRVGGYLEARRVHDVCAAHGIPVWC 289 (368)
T ss_dssp CCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCcEEe
Confidence 456788888887656788888776789999999999999999999544
No 277
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=42.02 E-value=13 Score=35.57 Aligned_cols=28 Identities=18% Similarity=0.409 Sum_probs=25.4
Q ss_pred CCCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 142 SAYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 142 ~~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
+.+|+..+++++.+.||++|+.||+|.+
T Consensus 106 p~~Gt~~df~~Lv~~aH~~GIkVilD~V 133 (680)
T 1cyg_A 106 PFFGTLSDFQRLVDAAHAKGIKVIIDFA 133 (680)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 4578899999999999999999999985
No 278
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=41.53 E-value=9.9 Score=34.57 Aligned_cols=27 Identities=4% Similarity=0.086 Sum_probs=23.8
Q ss_pred CCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 143 AYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 143 ~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
.+|+..+++++.+.||++|+.||.|.+
T Consensus 98 ~~Gt~~df~~Lv~~aH~~Gi~VilD~V 124 (488)
T 2wc7_A 98 MLGGNEAFKELLDAAHQRNIKVVLDGV 124 (488)
T ss_dssp GGTHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 367778899999999999999999975
No 279
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=41.48 E-value=11 Score=35.05 Aligned_cols=26 Identities=15% Similarity=0.418 Sum_probs=22.4
Q ss_pred CCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 144 YARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 144 ~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
+|+..+++++.+.||++|+.||+|.+
T Consensus 89 ~Gt~~df~~lv~~aH~~Gi~VilD~V 114 (570)
T 1m53_A 89 YGTMEDFDSLVAEMKKRNMRLMIDVV 114 (570)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 35666788999999999999999985
No 280
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=40.74 E-value=12 Score=34.79 Aligned_cols=26 Identities=8% Similarity=0.388 Sum_probs=23.1
Q ss_pred CCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 144 YARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 144 ~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
+|+..+++++.+.||++|+.||+|.+
T Consensus 75 ~Gt~~df~~lv~~~h~~Gi~VilD~V 100 (558)
T 1uok_A 75 FGTMEDWDELLHEMHERNMKLMMDLV 100 (558)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 56777889999999999999999985
No 281
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=40.72 E-value=14 Score=35.21 Aligned_cols=28 Identities=18% Similarity=0.434 Sum_probs=25.1
Q ss_pred CCCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 142 SAYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 142 ~~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
+.+|+..+++++.+.||++|+.||+|.+
T Consensus 110 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V 137 (686)
T 1d3c_A 110 PAYGTIADFQNLIAAAHAKNIKVIIDFA 137 (686)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 3478888999999999999999999985
No 282
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=40.71 E-value=14 Score=35.37 Aligned_cols=28 Identities=11% Similarity=0.351 Sum_probs=25.1
Q ss_pred CCCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 142 SAYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 142 ~~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
+.+|+..+++++.+.||++|+.||+|.+
T Consensus 111 p~~Gt~~dfk~Lv~~aH~~GikVilD~V 138 (683)
T 3bmv_A 111 PYFGSFTDFQNLINTAHAHNIKVIIDFA 138 (683)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 3578888999999999999999999986
No 283
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=40.66 E-value=14 Score=34.59 Aligned_cols=26 Identities=8% Similarity=0.243 Sum_probs=22.2
Q ss_pred CCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 144 YARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 144 ~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
+|+..+++++.+.||++|+.||.|.+
T Consensus 219 ~Gt~~df~~lv~~~H~~Gi~VilD~V 244 (588)
T 1j0h_A 219 FGDKETLKTLIDRCHEKGIRVMLDAV 244 (588)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 34566788999999999999999975
No 284
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=40.27 E-value=14 Score=34.57 Aligned_cols=26 Identities=15% Similarity=0.169 Sum_probs=22.7
Q ss_pred CCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 144 YARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 144 ~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
+|+..+++++.+.||++|+.||+|.+
T Consensus 84 ~Gt~~df~~lv~~~h~~Gi~VilD~V 109 (589)
T 3aj7_A 84 YGTNEDCFALIEKTHKLGMKFITDLV 109 (589)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 45667788999999999999999986
No 285
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=40.11 E-value=13 Score=34.82 Aligned_cols=26 Identities=12% Similarity=0.107 Sum_probs=22.1
Q ss_pred CCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 144 YARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 144 ~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
+|+..+++++.+.||++|+.||+|.+
T Consensus 205 ~Gt~~dfk~Lv~~aH~~GI~VilD~V 230 (599)
T 3bc9_A 205 YGTKGELENAIDALHNNDIKVYFDAV 230 (599)
T ss_dssp TBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 45566788999999999999999985
No 286
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=40.08 E-value=51 Score=29.56 Aligned_cols=46 Identities=7% Similarity=0.010 Sum_probs=34.7
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEE
Q 022463 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 121 d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~liv 166 (297)
+++++++.+...-..++.+..+..|.+.+.-++.++|+++|+.+++
T Consensus 333 n~~~i~~~Ie~~a~n~IlIKvnqiGGITEalkaa~lA~~~G~~vmv 378 (441)
T 3qtp_A 333 NPARVQMAMDKNACNSVLIKVNQIGTLTETFKTIKMAQEKGWGVMA 378 (441)
T ss_dssp CHHHHHHHHHHTCCSEEEECGGGTCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHcCCCCEEEecccccccHHHHHHHHHHHHHcCCeEEE
Confidence 4666777776534567777555678888888999999999988776
No 287
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=39.63 E-value=54 Score=22.44 Aligned_cols=43 Identities=14% Similarity=-0.010 Sum_probs=30.7
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEE
Q 022463 122 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 122 ~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~liv 166 (297)
.++..+++...+.++|++.. + ....-.+.|..+|++++++++.
T Consensus 20 ~~~v~kai~~gka~lViiA~-D-~~~~~~~~i~~~c~~~~ip~~~ 62 (99)
T 3j21_Z 20 SNETIRLAKTGGAKLIIVAK-N-APKEIKDDIYYYAKLSDIPVYE 62 (99)
T ss_dssp HHHHHHHHHHTCCSEEEEEC-C-CCHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHcCCccEEEEeC-C-CCHHHHHHHHHHHHHcCCCEEE
Confidence 46778888877888988831 2 2233356888899999999754
No 288
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=39.45 E-value=13 Score=35.31 Aligned_cols=26 Identities=4% Similarity=-0.041 Sum_probs=22.7
Q ss_pred CCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 144 YARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 144 ~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
+|+..+++++.+.||++|+.||.|.+
T Consensus 282 ~Gt~~df~~LV~~aH~~GI~VIlD~V 307 (645)
T 4aef_A 282 LGGDRAFVDLLSELKRFDIKVILDGV 307 (645)
T ss_dssp GTCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHhhhcCCEEEEEec
Confidence 35667789999999999999999985
No 289
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=39.45 E-value=14 Score=34.52 Aligned_cols=26 Identities=12% Similarity=0.333 Sum_probs=22.1
Q ss_pred CCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 144 YARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 144 ~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
+|+..+++++.+.||++|+.||.|.+
T Consensus 216 ~Gt~~dfk~lv~~~H~~Gi~VilD~V 241 (585)
T 1wzl_A 216 FGDLPTFRRLVDEAHRRGIKIILDAV 241 (585)
T ss_dssp TCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 34566788999999999999999975
No 290
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=39.18 E-value=40 Score=29.29 Aligned_cols=48 Identities=13% Similarity=0.035 Sum_probs=38.8
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEE
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~liv 166 (297)
..+++++++.+......+|.+.....|.+.+..+|.++|+++|+.+++
T Consensus 248 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~ 295 (375)
T 1r0m_A 248 VASASDARKALALGAGGVINLKVARVGGHAESRRVHDVAQSFGAPVWC 295 (375)
T ss_dssp CCSHHHHHHHHHHTSCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCHHHHHHHHHhCCCCEEEECcchhcCHHHHHHHHHHHHHcCCcEEe
Confidence 356778888887645788888776789999999999999999999544
No 291
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=38.96 E-value=30 Score=25.38 Aligned_cols=49 Identities=12% Similarity=0.144 Sum_probs=33.9
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcC---CEEEEeh
Q 022463 120 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK---AIMLADM 168 (297)
Q Consensus 120 ~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g---~~livD~ 168 (297)
.+++++.+++.+.++++|.++.+.+.....++++.+..++.+ +.+++=+
T Consensus 41 ~p~e~~v~~a~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~g~~~i~v~vGG 92 (137)
T 1ccw_A 41 SPQELFIKAAIETKADAILVSSLYGQGEIDCKGLRQKCDEAGLEGILLYVGG 92 (137)
T ss_dssp ECHHHHHHHHHHHTCSEEEEEECSSTHHHHHTTHHHHHHHTTCTTCEEEEEE
T ss_pred CCHHHHHHHHHhcCCCEEEEEecCcCcHHHHHHHHHHHHhcCCCCCEEEEEC
Confidence 567888888877799999996555545555667777776654 5566644
No 292
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=38.92 E-value=11 Score=33.43 Aligned_cols=28 Identities=4% Similarity=0.101 Sum_probs=24.5
Q ss_pred CCCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 142 SAYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 142 ~~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
+.+|+..+++++.+.||++|+.||+|.+
T Consensus 69 ~~~G~~~d~~~lv~~~h~~Gi~VilD~V 96 (422)
T 1ua7_A 69 RYLGTEQEFKEMCAAAEEYGIKVIVDAV 96 (422)
T ss_dssp TTTEEHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 3478888999999999999999999975
No 293
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=38.47 E-value=13 Score=34.44 Aligned_cols=26 Identities=8% Similarity=0.294 Sum_probs=22.4
Q ss_pred CCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 144 YARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 144 ~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
+|+..+++++.+.||++|+.||+|.+
T Consensus 75 ~Gt~~df~~lv~~~h~~Gi~VilD~V 100 (543)
T 2zic_A 75 FGNMADMDNLLTQAKMRGIKIIMDLV 100 (543)
T ss_dssp GCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 45666788999999999999999975
No 294
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=38.25 E-value=49 Score=28.90 Aligned_cols=50 Identities=6% Similarity=-0.006 Sum_probs=41.3
Q ss_pred CcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEe
Q 022463 118 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 118 ~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD 167 (297)
...+++++++.+.....++|.+..+..|-+.+..+|.++|+++|+.+.+=
T Consensus 253 ~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~ 302 (383)
T 3i4k_A 253 SVWTPAEALAVVKAQAADVIALKTTKHGGLLESKKIAAIAEAGGLACHGA 302 (383)
T ss_dssp TCSSHHHHHHHHHHTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCEEEEC
T ss_pred ccCCHHHHHHHHHcCCCCEEEEcccccCCHHHHHHHHHHHHHcCCeEEeC
Confidence 34567888888876457888887777899999999999999999998764
No 295
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=38.18 E-value=42 Score=29.16 Aligned_cols=51 Identities=8% Similarity=-0.060 Sum_probs=42.5
Q ss_pred CcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEeh
Q 022463 118 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 118 ~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~ 168 (297)
...+++++++.+.....++|.+..+..|-..+..+|.++|+++|+.+.+-+
T Consensus 243 ~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~ 293 (368)
T 3q45_A 243 SCCNSFDAERLIQIQACDSFNLKLSKSAGITNALNIIRLAEQAHMPVQVGG 293 (368)
T ss_dssp TCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECC
T ss_pred CcCCHHHHHHHHHcCCCCeEEechhhcCCHHHHHHHHHHHHHcCCcEEecC
Confidence 346788888888865678888877778999999999999999999988753
No 296
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=38.13 E-value=56 Score=22.89 Aligned_cols=43 Identities=12% Similarity=-0.056 Sum_probs=30.1
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEE
Q 022463 122 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 122 ~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~liv 166 (297)
.+...+++...+.++|++. ++. ...-...|..+|++++++++.
T Consensus 26 ~~~v~kai~~gka~lViiA-~D~-~~~~~~~l~~~c~~~~Vp~~~ 68 (110)
T 3cpq_A 26 SKRTIKFVKHGEGKLVVLA-GNI-PKDLEEDVKYYAKLSNIPVYQ 68 (110)
T ss_dssp HHHHHHHHHTTCCSEEEEC-TTC-BHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHcCCceEEEEe-CCC-CHHHHHHHHHHHHHcCCCEEE
Confidence 4577788887678888882 122 233356888999999999653
No 297
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=37.71 E-value=15 Score=34.07 Aligned_cols=26 Identities=8% Similarity=0.377 Sum_probs=22.9
Q ss_pred CCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 144 YARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 144 ~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
+|+..+++++.+.||++|+.||+|.+
T Consensus 75 ~Gt~~d~~~lv~~~h~~Gi~vilD~V 100 (555)
T 2ze0_A 75 FGTMDDFDELLAQAHRRGLKVILDLV 100 (555)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 56677889999999999999999975
No 298
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=37.61 E-value=38 Score=22.41 Aligned_cols=45 Identities=11% Similarity=-0.097 Sum_probs=31.3
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEeh
Q 022463 122 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 122 ~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~ 168 (297)
..+..++++..+.++|++.. +... .-.+.+..+|++++++++.-.
T Consensus 16 ~~~v~kai~~gkaklViiA~-D~~~-~~~~~i~~lc~~~~Ip~~~v~ 60 (82)
T 3v7e_A 16 TKQTVKALKRGSVKEVVVAK-DADP-ILTSSVVSLAEDQGISVSMVE 60 (82)
T ss_dssp HHHHHHHHTTTCEEEEEEET-TSCH-HHHHHHHHHHHHHTCCEEEES
T ss_pred HHHHHHHHHcCCeeEEEEeC-CCCH-HHHHHHHHHHHHcCCCEEEEC
Confidence 45777888876778888821 2221 345688999999999987643
No 299
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=36.89 E-value=33 Score=29.87 Aligned_cols=51 Identities=4% Similarity=0.046 Sum_probs=41.6
Q ss_pred CcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEeh
Q 022463 118 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 118 ~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~ 168 (297)
...+++++++.+.....++|.+.....|.+....++.++|+++|+.+++=+
T Consensus 250 ~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~gi~~~~h~ 300 (371)
T 2ovl_A 250 NLHTLYDFHNAVRAGSLTLPEPDVSNIGGYTTFRKVAALAEANNMLLTSHG 300 (371)
T ss_dssp TCCSHHHHHHHHHHTCCSEECCCTTTTTSHHHHHHHHHHHHHTTCCEEECS
T ss_pred CCCCHHHHHHHHHcCCCCEEeeCccccCCHHHHHHHHHHHHHcCCeEcccc
Confidence 345788888888875577887766678999999999999999999988854
No 300
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=36.71 E-value=17 Score=34.30 Aligned_cols=25 Identities=8% Similarity=0.118 Sum_probs=21.3
Q ss_pred CCcccHHHHHHHHHhcCCEEEEehh
Q 022463 145 ARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 145 G~~~~~~~i~~la~~~g~~livD~a 169 (297)
|+..+++++.+-||++|+.||+|.+
T Consensus 160 Gt~~d~~~Lv~~ah~~GI~VilD~V 184 (628)
T 1g5a_A 160 GTIGDLREVIAALHEAGISAVVDFI 184 (628)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 4455688999999999999999975
No 301
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=36.61 E-value=53 Score=27.66 Aligned_cols=52 Identities=12% Similarity=0.098 Sum_probs=34.6
Q ss_pred CHHHHHHHhh----hcCCcEEEEc-CCCCCCc---ccHHHHHHHHHhc-CCEEEEehhhhc
Q 022463 121 DYDQLEKSAT----LFRPKLIVAG-ASAYARL---YDYERIRKVCNKQ-KAIMLADMAHIS 172 (297)
Q Consensus 121 d~~~l~~~l~----~~~~~~v~~~-~~~~G~~---~~~~~i~~la~~~-g~~livD~a~~~ 172 (297)
+++++..++. ..++.+++++ .++++.. .++..|..+.+.. +++|++|..|+.
T Consensus 144 t~~ei~~Av~~i~~~Gn~~i~L~~rg~~~~y~~~~~dl~~i~~lk~~~~~~pV~~D~sH~~ 204 (292)
T 1o60_A 144 SPSQMGNIVEKIEECGNDKIILCDRGTNFGYDNLIVDMLGFSVMKKASKGSPVIFDVTHSL 204 (292)
T ss_dssp CGGGHHHHHHHHHHTTCCCEEEEECCEECSTTCEECCTTHHHHHHHHTTSCCEEEEHHHHC
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCccccCHHHHHHHHhhCCCCCEEEECCCcc
Confidence 4555554432 3356777773 3334432 5888998877777 899999999983
No 302
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=36.60 E-value=15 Score=35.22 Aligned_cols=26 Identities=19% Similarity=0.446 Sum_probs=22.7
Q ss_pred CCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 144 YARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 144 ~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
+|+..+++++.+.||++|+.||+|.+
T Consensus 308 ~Gt~~df~~Lv~~aH~~GikVilD~V 333 (696)
T 4aee_A 308 LGTMEDFEKLVQVLHSRKIKIVLDIT 333 (696)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEecc
Confidence 35667788999999999999999986
No 303
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=36.49 E-value=56 Score=27.34 Aligned_cols=51 Identities=16% Similarity=0.117 Sum_probs=34.5
Q ss_pred CHHHHHHHhh----hcCCcEEEEc-CCCCCCc---ccHHHHHHHHHhc-CCEEEEehhhh
Q 022463 121 DYDQLEKSAT----LFRPKLIVAG-ASAYARL---YDYERIRKVCNKQ-KAIMLADMAHI 171 (297)
Q Consensus 121 d~~~l~~~l~----~~~~~~v~~~-~~~~G~~---~~~~~i~~la~~~-g~~livD~a~~ 171 (297)
+++++..++. ..++.+++++ .++|+.. .++..|..+.+.. +.+|++|..|+
T Consensus 141 t~~e~~~A~~~i~~~Gn~~i~L~~rg~~~~~~~~~~dl~~i~~lk~~~~~~pV~~D~sH~ 200 (280)
T 2qkf_A 141 SPSQMKNIVEKFHEAGNGKLILCERGSSFGYDNLVVDMLGFGVMKQTCGNLPVIFDVTHS 200 (280)
T ss_dssp CGGGHHHHHHHHHHTTCCCEEEEECCEECSTTCEECCTTHHHHHHHHTTTCCEEEEHHHH
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCccccCHHHHHHHHHhCCCCCEEEECCCC
Confidence 4555554442 3356777773 3345432 5888888888877 89999999998
No 304
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=36.37 E-value=15 Score=34.22 Aligned_cols=49 Identities=8% Similarity=0.185 Sum_probs=33.5
Q ss_pred CHHHHHHHhh---hcCCcEEEEc-----CCC--------------CCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 121 DYDQLEKSAT---LFRPKLIVAG-----ASA--------------YARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 121 d~~~l~~~l~---~~~~~~v~~~-----~~~--------------~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
|+..+.+.|. +-....|.+. +++ +|+..+++++.+.||++|+.||.|.+
T Consensus 170 d~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V 240 (583)
T 1ea9_C 170 DLQGVIDHLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAV 240 (583)
T ss_dssp CHHHHHHTHHHHHHHTCSEEEECCCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEECC
T ss_pred CHHHHHHhhHHHHHcCCCEEEECCCccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 6666655443 3356777772 222 23455688999999999999999985
No 305
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=36.31 E-value=62 Score=22.18 Aligned_cols=43 Identities=19% Similarity=0.032 Sum_probs=30.3
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEE
Q 022463 122 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 122 ~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~liv 166 (297)
.+...++++..+.++|++.. + ....-...|..+|++++++++.
T Consensus 21 ~~~v~kai~~gka~lViiA~-D-~~~~~~~~l~~~c~~~~vp~~~ 63 (101)
T 1w41_A 21 ARKSIQYAKMGGAKLIIVAR-N-ARPDIKEDIEYYARLSGIPVYE 63 (101)
T ss_dssp HHHHHHHHHHTCCSEEEEET-T-SCHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHcCCCcEEEEeC-C-CCHHHHHHHHHHHHhcCCCEEE
Confidence 45777888876788888821 2 2233356888999999999664
No 306
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=36.14 E-value=55 Score=24.02 Aligned_cols=44 Identities=7% Similarity=0.095 Sum_probs=29.4
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEE
Q 022463 122 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 122 ~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~liv 166 (297)
.....++++..+.++|++. .+.....-...|..+|+++|++++.
T Consensus 37 ~~~v~kai~~gkakLViiA-~D~~p~~~~~~l~~lc~~~~VP~~~ 80 (134)
T 2ale_A 37 ANEATKTLNRGISEFIIMA-ADCEPIEILLHLPLLCEDKNVPYVF 80 (134)
T ss_dssp HHHHHHHHHHTCEEEEEEE-TTCSSGGGGTHHHHHHHHHTCCEEE
T ss_pred chHHHHHHHhCCCeEEEEe-CCCCHHHHHHHHHHHHHhcCCCEEE
Confidence 4567777877677888882 1222222356888999999999654
No 307
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=36.10 E-value=59 Score=28.95 Aligned_cols=50 Identities=8% Similarity=-0.073 Sum_probs=37.7
Q ss_pred CcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEe
Q 022463 118 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 118 ~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD 167 (297)
...+++++.+.+...-..+|.+.....|.+.+..++.++|+++|+.+++-
T Consensus 319 ~~~~~~~~~~~i~~~a~d~i~ik~~~~GGite~~~i~~~A~~~g~~~~~~ 368 (431)
T 2fym_A 319 FVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVIS 368 (431)
T ss_dssp TTTCHHHHHHHHHTTCCSEEEECGGGTCSHHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCHHHHHHHHHhCCCCEEEECccccCCHHHHHHHHHHHHHCCCeEEEe
Confidence 34566777777765346777776666888888889999999999988763
No 308
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=35.79 E-value=70 Score=27.71 Aligned_cols=55 Identities=16% Similarity=0.199 Sum_probs=38.8
Q ss_pred CCHHHHHHHhh----hcCCcEEEE-c-CCCC----CCcccHHHHHHHHHhcCCEEEEehhhhccc
Q 022463 120 IDYDQLEKSAT----LFRPKLIVA-G-ASAY----ARLYDYERIRKVCNKQKAIMLADMAHISGL 174 (297)
Q Consensus 120 ~d~~~l~~~l~----~~~~~~v~~-~-~~~~----G~~~~~~~i~~la~~~g~~livD~a~~~g~ 174 (297)
.+++++..++. ..++.++++ . .++| -...++..|..+.+.+++++++|..|+.|-
T Consensus 224 ~tl~ei~~Ave~i~~~GN~~viLceRG~~typ~~~~~~vdl~ai~~lk~~~~lpVi~dssHs~G~ 288 (350)
T 1vr6_A 224 NTIEEFLLSAEYIANSGNTKIILCERGIRTFEKATRNTLDISAVPIIRKESHLPILVDPSHSGGR 288 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECHHHHHCS
T ss_pred CCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcChhhhhHHHHHHHHHhhCCCEEEeCCCCCcc
Confidence 37777776654 234677777 2 3233 345678888888888899999999999874
No 309
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=35.35 E-value=61 Score=27.22 Aligned_cols=41 Identities=12% Similarity=0.199 Sum_probs=30.2
Q ss_pred cCCcEEEEc-CCCCCCc---ccHHHHHHHHHhc-CCEEEEehhhhc
Q 022463 132 FRPKLIVAG-ASAYARL---YDYERIRKVCNKQ-KAIMLADMAHIS 172 (297)
Q Consensus 132 ~~~~~v~~~-~~~~G~~---~~~~~i~~la~~~-g~~livD~a~~~ 172 (297)
.+..+++++ .++|+.. .|+..|..+.+.. |++|++|..|+.
T Consensus 161 Gn~~i~L~erg~~y~~~~~~vdl~~i~~lk~~~~~~pV~~D~sHs~ 206 (285)
T 3sz8_A 161 GNDRVMLCERGSSFGYDNLVVDMLGFRQMAETTGGCPVIFDVTHSL 206 (285)
T ss_dssp TCCCEEEEECCEECSSSCEECCTTHHHHHHHHTTSCCEEEETTTTC
T ss_pred CCCcEEEEeCCCCCCCCcCccCHHHHHHHHHhCCCCCEEEeCCCcc
Confidence 356777773 4456533 4788888888777 799999999974
No 310
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=35.31 E-value=52 Score=24.21 Aligned_cols=46 Identities=11% Similarity=0.060 Sum_probs=34.7
Q ss_pred HHHHHhhhcCCcEEEEcCC--CCCC-cccHHHHHHHHHhcCCEEEEehh
Q 022463 124 QLEKSATLFRPKLIVAGAS--AYAR-LYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 124 ~l~~~l~~~~~~~v~~~~~--~~G~-~~~~~~i~~la~~~g~~livD~a 169 (297)
++.+.|.+.+..+|+..+. +-.. ..|...|++.|-.|+++++-.-+
T Consensus 65 ~I~d~I~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~la 113 (134)
T 2xw6_A 65 QMGARVAEGRILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPLATNPM 113 (134)
T ss_dssp HHHHHHHTTCEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCEECSHH
T ss_pred hHHHHHHCCCccEEEEccCcccCCCccchHHHHHHHHHHcCCCeEcCHH
Confidence 5777887767788877433 3223 67889999999999999997654
No 311
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=34.93 E-value=16 Score=34.57 Aligned_cols=25 Identities=12% Similarity=0.050 Sum_probs=21.2
Q ss_pred CCcccHHHHHHHHHhcCCEEEEehh
Q 022463 145 ARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 145 G~~~~~~~i~~la~~~g~~livD~a 169 (297)
|+..+++++.+.||++|+.||+|.+
T Consensus 153 Gt~~df~~Lv~~aH~~GI~VilD~V 177 (644)
T 3czg_A 153 GSNDDLVALTSRLREAGISLCADFV 177 (644)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3455788999999999999999975
No 312
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=34.60 E-value=52 Score=29.14 Aligned_cols=50 Identities=8% Similarity=0.025 Sum_probs=40.6
Q ss_pred CcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEe
Q 022463 118 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 118 ~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD 167 (297)
...+++++.+.+...-..+|.+..+..|.+.+..++.++|+++|+.+++=
T Consensus 309 ~~~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~i~~~A~~~gi~~~~~ 358 (413)
T 1kko_A 309 WCNTYQDIVDFTDAGSCHMVQIKTPDLGGIHNIVDAVLYCNKHGMEAYQG 358 (413)
T ss_dssp TCCSHHHHHHHHHTTCCSEEEECGGGGSSTHHHHHHHHHHHHHTCEEEEC
T ss_pred CCCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEec
Confidence 45678888888876456788876666888899999999999999998774
No 313
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=34.01 E-value=56 Score=28.35 Aligned_cols=49 Identities=6% Similarity=-0.075 Sum_probs=39.9
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEe
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD 167 (297)
..+++++++.+.....++|.+..+..|-+.+..+|.++|+++|+.+.+-
T Consensus 248 ~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~g~~~~~~ 296 (370)
T 1chr_A 248 LSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGG 296 (370)
T ss_dssp CCSHHHHHHHHTTTSCSEEEECTTTSCSHHHHHHHHHHHHHHTCEEEEC
T ss_pred cCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCeEEec
Confidence 4567778887776457888887777899999999999999999998764
No 314
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=33.98 E-value=55 Score=26.06 Aligned_cols=51 Identities=10% Similarity=0.064 Sum_probs=38.9
Q ss_pred cCCHHHHHHHhhhcCCcEEEE--cCCCCCCcccHHHHHHHHHhcC----CEEEEehh
Q 022463 119 YIDYDQLEKSATLFRPKLIVA--GASAYARLYDYERIRKVCNKQK----AIMLADMA 169 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~--~~~~~G~~~~~~~i~~la~~~g----~~livD~a 169 (297)
.++++++.+.+.+.++++|.+ +...+.....++++.+..++.+ +++++=++
T Consensus 129 ~vp~e~iv~~~~~~~~d~v~l~~S~l~~~~~~~~~~~i~~l~~~~~~~~v~v~vGG~ 185 (215)
T 3ezx_A 129 DVLNENVVEEAAKHKGEKVLLVGSALMTTSMLGQKDLMDRLNEEKLRDSVKCMFGGA 185 (215)
T ss_dssp SCCHHHHHHHHHHTTTSCEEEEEECSSHHHHTHHHHHHHHHHHTTCGGGSEEEEESS
T ss_pred CCCHHHHHHHHHHcCCCEEEEEchhcccCcHHHHHHHHHHHHHcCCCCCCEEEEECC
Confidence 467899988888779999999 6555666777888888888875 56777544
No 315
>3b1s_B Flagellar biosynthetic protein FLHB; type III secretion system, protein transport, MEMB protein; 2.55A {Aquifex aeolicus}
Probab=40.21 E-value=8.6 Score=26.15 Aligned_cols=18 Identities=6% Similarity=0.165 Sum_probs=16.6
Q ss_pred HHHHHHHHhcCCEEEEeh
Q 022463 151 ERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 151 ~~i~~la~~~g~~livD~ 168 (297)
.+|.++|+++|++++.|-
T Consensus 30 ~~I~e~A~e~~VPi~e~~ 47 (87)
T 3b1s_B 30 QKIVEIAENYSIPVVRKP 47 (87)
Confidence 589999999999999995
No 316
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=33.72 E-value=85 Score=24.30 Aligned_cols=46 Identities=4% Similarity=-0.086 Sum_probs=35.6
Q ss_pred HHHHHhhhcCCcEEEEcCC--CCCC-cccHHHHHHHHHhcCCEEEEehh
Q 022463 124 QLEKSATLFRPKLIVAGAS--AYAR-LYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 124 ~l~~~l~~~~~~~v~~~~~--~~G~-~~~~~~i~~la~~~g~~livD~a 169 (297)
++.+.|.+.+..+|+..+. +-.. ..|...|+++|-.||++++---+
T Consensus 89 qI~d~I~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~Tnla 137 (178)
T 1vmd_A 89 QIGAMIAEGKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAITRS 137 (178)
T ss_dssp HHHHHHHTTSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEESSHH
T ss_pred hHHHHHHCCCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEeCHH
Confidence 5777888768888887433 3323 67899999999999999997654
No 317
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=33.27 E-value=67 Score=26.31 Aligned_cols=50 Identities=6% Similarity=0.156 Sum_probs=37.7
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcC--CEEEEehh
Q 022463 120 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK--AIMLADMA 169 (297)
Q Consensus 120 ~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g--~~livD~a 169 (297)
+.++++.+.+.+.++++|.++...+.....+.++.+..++.+ +++++=++
T Consensus 161 vp~e~l~~~~~~~~~d~V~lS~l~~~~~~~~~~~i~~l~~~~~~~~v~vGG~ 212 (258)
T 2i2x_B 161 VPAEEVLAAVQKEKPIMLTGTALMTTTMYAFKEVNDMLLENGIKIPFACGGG 212 (258)
T ss_dssp CCSHHHHHHHHHHCCSEEEEECCCTTTTTHHHHHHHHHHTTTCCCCEEEEST
T ss_pred CCHHHHHHHHHHcCCCEEEEEeeccCCHHHHHHHHHHHHhcCCCCcEEEECc
Confidence 567888888877799999997666667777888888888765 66666443
No 318
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=33.24 E-value=59 Score=28.74 Aligned_cols=49 Identities=2% Similarity=-0.041 Sum_probs=40.5
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEe
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD 167 (297)
..+++++.+.+...-..+|.+-.+..|.+.+..++.++|+++|+.+++=
T Consensus 310 ~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~i~~~A~~~gi~~~~~ 358 (413)
T 1kcz_A 310 CNTVEDVKFFTDNKAGHMVQIKTPDLGGVNNIADAIMYCKANGMGAYCG 358 (413)
T ss_dssp CCSHHHHHHHHHTTCSSEEEECTGGGSSTHHHHHHHHHHHHTTCEEEEC
T ss_pred cCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEec
Confidence 5678888888876456788876666888989999999999999998884
No 319
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=33.22 E-value=30 Score=30.10 Aligned_cols=51 Identities=14% Similarity=-0.083 Sum_probs=41.6
Q ss_pred CcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEeh
Q 022463 118 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 118 ~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~ 168 (297)
...+++++++.+......+|.+.....|.+....++.++|+++|+.+++=+
T Consensus 247 ~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 297 (371)
T 2ps2_A 247 LATNEMSIVKILADDAAEGIDLKISKAGGLTRGRRQRDICLAAGYSVSVQE 297 (371)
T ss_dssp TCCSHHHHHHHHHHTCCSEEEEEHHHHTSHHHHHHHHHHHHHHTCEEEEEC
T ss_pred CcCCHHHHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHcCCeEEecC
Confidence 345788899988875678888865568889999999999999999988753
No 320
>2gm2_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Xanthomonas campestris PV}
Probab=32.89 E-value=60 Score=23.71 Aligned_cols=49 Identities=12% Similarity=0.228 Sum_probs=34.8
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
.+++++++..+.. +|.+|+++.-..+. .+-.++.+..+++|+-+-+-.+
T Consensus 51 ~l~~e~l~~ll~~-~pevliiGTG~~~~-~l~p~~~~~l~~~GI~vE~m~T 99 (132)
T 2gm2_A 51 QLQPAHMDAVLAL-NPAVILLGTGERQQ-FPSTDVLAACLTRGIGLEAMTN 99 (132)
T ss_dssp GCCTTTSHHHHHH-CCSEEEEECTTSCC-CCCHHHHHHHHHHTCEEEEECH
T ss_pred cCCHHHHHHHHhc-CCCEEEECCCCCCC-cCCHHHHHHHHHcCCEEEEeCH
Confidence 5677788888877 79999995333333 4446889999999987655443
No 321
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=32.83 E-value=28 Score=30.49 Aligned_cols=50 Identities=6% Similarity=0.007 Sum_probs=41.1
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEeh
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~ 168 (297)
..+++++++.+.....++|.+.....|.+....++.++|+++|+.+++=+
T Consensus 250 i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 299 (384)
T 2pgw_A 250 AFTLYDVYEICRQRAADMICIGPREIGGIQPMMKAAAVAEAAGLKICIHS 299 (384)
T ss_dssp CCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEECC
T ss_pred cCCHHHHHHHHHcCCCCEEEEcchhhCCHHHHHHHHHHHHHCCCeEeecc
Confidence 45788888888765678888866567888999999999999999888765
No 322
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=32.68 E-value=33 Score=29.94 Aligned_cols=50 Identities=8% Similarity=-0.097 Sum_probs=41.2
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEeh
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~ 168 (297)
..+++++++.+.....++|.+.....|......++.++|+++|+.+++=+
T Consensus 246 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~~ 295 (378)
T 2qdd_A 246 LHEFSDHLAAWSRGACEGVKIKPNRVGGLTRARQIRDFGVSVGWQMHIED 295 (378)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECC
T ss_pred cCCHHHHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEecC
Confidence 45678888888775678888865567889999999999999999988873
No 323
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=32.61 E-value=46 Score=24.25 Aligned_cols=38 Identities=5% Similarity=0.024 Sum_probs=26.5
Q ss_pred HHHHHhh-hcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEE
Q 022463 124 QLEKSAT-LFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 124 ~l~~~l~-~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~liv 166 (297)
.+..++. . ++.+|++ +|...|-+++.++|+++|++++.
T Consensus 65 ~~l~a~~~~-~~~~iIl----t~g~~~~~~i~~~A~~~~ipvl~ 103 (139)
T 2ioj_A 65 LLLTALEMP-NVRCLIL----TGNLEPVQLVLTKAEERGVPVIL 103 (139)
T ss_dssp HHHHHTTCT-TEEEEEE----ETTCCCCHHHHHHHHHHTCCEEE
T ss_pred HHHHHHhCC-CCcEEEE----cCCCCCCHHHHHHHHHCCCeEEE
Confidence 3445554 4 6677777 23345668899999999999876
No 324
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=32.57 E-value=73 Score=25.28 Aligned_cols=35 Identities=6% Similarity=0.138 Sum_probs=28.7
Q ss_pred cCCcEEEEc-CCC-CCCcccHHHHHHHHHhcCCEEEE
Q 022463 132 FRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 132 ~~~~~v~~~-~~~-~G~~~~~~~i~~la~~~g~~liv 166 (297)
.+|..|++- ..| -|......++.++|++||++++.
T Consensus 158 l~Pa~vicEi~~~~dG~mar~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 158 LQPAGVICELVRDEDGLMMRLDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp SCSBEEEEEBBCTTTCCBCBHHHHHHHHHHHTCCEEE
T ss_pred CCceEEEEEEeECCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 368888884 324 69999999999999999998774
No 325
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=32.17 E-value=60 Score=27.47 Aligned_cols=52 Identities=10% Similarity=0.113 Sum_probs=34.5
Q ss_pred CCHHHHHHHhh----hcCCcEEEEc-CCCCCCc---ccHHHHHHHHHhcCCEEEEehhhhc
Q 022463 120 IDYDQLEKSAT----LFRPKLIVAG-ASAYARL---YDYERIRKVCNKQKAIMLADMAHIS 172 (297)
Q Consensus 120 ~d~~~l~~~l~----~~~~~~v~~~-~~~~G~~---~~~~~i~~la~~~g~~livD~a~~~ 172 (297)
.++++++.++. ..+..+++++ .++|+.. .|+..|..+.+ .+++|++|..|+.
T Consensus 166 ~t~~ei~~ave~i~~~Gn~~iiL~erg~~y~~~~~~vdl~~i~~lk~-~~~PV~~D~sHsv 225 (298)
T 3fs2_A 166 LAPWDMKNVLAKITESGNPNVLATERGVSFGYNTLVSDMRALPIMAG-LGAPVIFDATHSV 225 (298)
T ss_dssp CCGGGHHHHHHHHHTTTCCCEEEEECCEECSSSCEECCTTHHHHHHT-TTSCEEEEHHHHT
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccCHHHHHHHHH-cCCcEEEcCCCcc
Confidence 35555544433 2356777773 4445532 47888888766 8999999999984
No 326
>1xbi_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich fold, RNA binding protein/structural protein complex; HET: EPE; 1.45A {Methanocaldococcus jannaschii} SCOP: d.79.3.1 PDB: 1ra4_A* 1sds_A 3paf_A
Probab=32.17 E-value=72 Score=22.74 Aligned_cols=45 Identities=9% Similarity=0.042 Sum_probs=29.1
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEe
Q 022463 122 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 122 ~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD 167 (297)
.....+++...+.++|++.. +.....-...|..+|++++++++.-
T Consensus 34 ~~~v~kai~~gka~lViiA~-D~~p~~~~~~l~~lc~~~~VP~~~v 78 (120)
T 1xbi_A 34 ANEVTKAVERGIAKLVIIAE-DVKPEEVVAHLPYLCEEKGIPYAYV 78 (120)
T ss_dssp HHHHHHHHHHTCCSEEEEES-CCSSGGGTTTHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHcCCceEEEEcC-CCChHHHHHHHHHHHHhcCCCEEEe
Confidence 45677888776788888821 1111111467888999999886543
No 327
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=31.79 E-value=93 Score=24.71 Aligned_cols=35 Identities=6% Similarity=0.204 Sum_probs=28.5
Q ss_pred cCCcEEEEcC--CC-CCCcccHHHHHHHHHhcCCEEEE
Q 022463 132 FRPKLIVAGA--SA-YARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 132 ~~~~~v~~~~--~~-~G~~~~~~~i~~la~~~g~~liv 166 (297)
..|..+++.. .| -|......++.++|++||++++.
T Consensus 157 l~Pa~vicEiv~~~~dG~mar~~~l~~fA~~h~l~~it 194 (206)
T 3mio_A 157 LQPAGAICEIVSQKDEGSMAHTDELRVFADEHGLALIT 194 (206)
T ss_dssp SCSBEEEEEBBCSSSTTSBCCHHHHHHHHHHHTCEEEE
T ss_pred CCceEEEEEEeeeCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 3688888833 34 68999999999999999998874
No 328
>2jli_A YSCU, YOP proteins translocation protein; cell membrane, transmembrane, protein transport, type III secretion system, plasmid, membrane; 1.13A {Yersinia pestis}
Probab=31.73 E-value=25 Score=25.50 Aligned_cols=18 Identities=17% Similarity=0.460 Sum_probs=16.8
Q ss_pred HHHHHHHHhcCCEEEEeh
Q 022463 151 ERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 151 ~~i~~la~~~g~~livD~ 168 (297)
.+|.++|+++|++++.|-
T Consensus 74 ~~I~~~A~e~~VPi~e~~ 91 (123)
T 2jli_A 74 QTVRKIAEEEGVPILQRI 91 (123)
T ss_dssp HHHHHHHHHHTCCEEECH
T ss_pred HHHHHHHHHcCCCEEeCH
Confidence 489999999999999996
No 329
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=31.70 E-value=61 Score=28.40 Aligned_cols=49 Identities=8% Similarity=0.114 Sum_probs=39.3
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEe
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD 167 (297)
..+++++++.+......++.+.....|.+.+..+|.++|+++|+.+++=
T Consensus 261 ~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~~ 309 (393)
T 1wuf_A 261 IRSVKDVEQAHSIGSCRAINLKLARVGGMSSALKIAEYCALNEILVWCG 309 (393)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECTGGGTSHHHHHHHHHHHHHTTCEEEEC
T ss_pred cCCHHHHHHHHHhCCCCEEEeChhhhCCHHHHHHHHHHHHHcCCeEEec
Confidence 3567788888876446788876666899999999999999999998764
No 330
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=31.64 E-value=64 Score=28.50 Aligned_cols=52 Identities=4% Similarity=0.008 Sum_probs=42.3
Q ss_pred CcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 118 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 118 ~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
...+++++++.+.....++|.+..+..|-..+..+|.++|+++|+.+..-+.
T Consensus 273 ~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 324 (410)
T 3dip_A 273 NLAGTRRFHEMLCADAIDFVMLDLTWCGGLSEGRKIAALAETHARPLAPHXT 324 (410)
T ss_dssp TCCSHHHHHHHHHTTCCSEEEECTTTSSCHHHHHHHHHHHHHTTCCEEECSS
T ss_pred CcCCHHHHHHHHHcCCCCeEeecccccCCHHHHHHHHHHHHHcCCEEeeeCc
Confidence 3457788888887656788888777789999999999999999999976543
No 331
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=31.52 E-value=79 Score=21.64 Aligned_cols=44 Identities=9% Similarity=0.108 Sum_probs=30.4
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEe
Q 022463 122 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 122 ~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD 167 (297)
.++..++++..+.++|++.. +.. ..-.+.|..+|++++++++.-
T Consensus 23 ~~~v~kai~~gka~lViiA~-D~~-~~~~~~i~~~c~~~~ip~~~~ 66 (101)
T 3on1_A 23 EEQVVKAVQNGQVTLVILSS-DAG-IHTKKKLLDKCGSYQIPVKVV 66 (101)
T ss_dssp HHHHHHHHHTTCCSEEEEET-TSC-HHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHcCCCcEEEEeC-CCC-HHHHHHHHHHHHHcCCCEEEe
Confidence 46778888876788888821 111 123568888999999987653
No 332
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=31.15 E-value=23 Score=33.27 Aligned_cols=25 Identities=12% Similarity=0.116 Sum_probs=21.4
Q ss_pred CCcccHHHHHHHHHhcCCEEEEehh
Q 022463 145 ARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 145 G~~~~~~~i~~la~~~g~~livD~a 169 (297)
|+..+++++.+.||++|+.||.|.+
T Consensus 190 Gt~~d~~~lv~~~H~~Gi~VilD~V 214 (602)
T 2bhu_A 190 GRPEDLMALVDAAHRLGLGVFLDVV 214 (602)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEec
Confidence 4556788999999999999999975
No 333
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*
Probab=31.14 E-value=24 Score=33.79 Aligned_cols=25 Identities=20% Similarity=0.243 Sum_probs=21.4
Q ss_pred CCcccHHHHHHHHHhcCCEEEEehh
Q 022463 145 ARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 145 G~~~~~~~i~~la~~~g~~livD~a 169 (297)
|+..+++++.+.||++|+.||.|.+
T Consensus 318 Gt~edfk~LV~~aH~~GI~VilD~V 342 (695)
T 3zss_A 318 GTLDDFDHFVTEAGKLGLEIALDFA 342 (695)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEee
Confidence 4456788999999999999999986
No 334
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=31.03 E-value=37 Score=29.43 Aligned_cols=49 Identities=4% Similarity=-0.025 Sum_probs=39.4
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEe
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD 167 (297)
..+++++++.+.....++|.+.....|.+....++.++|+++|+.+++-
T Consensus 246 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 294 (369)
T 2p8b_A 246 LKSSREMRQIIKLEAADKVNIKLMKCGGIYPAVKLAHQAEMAGIECQVG 294 (369)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEEC
T ss_pred CCCHHHHHHHHHhCCCCEEEeecchhCCHHHHHHHHHHHHHcCCcEEec
Confidence 4577888888876557888885555788888899999999999998764
No 335
>1rlg_A 50S ribosomal protein L7AE; protein-RNA, structural protein/RNA complex; HET: 5BU; 2.70A {Archaeoglobus fulgidus} SCOP: d.79.3.1
Probab=30.99 E-value=93 Score=22.04 Aligned_cols=45 Identities=9% Similarity=0.040 Sum_probs=29.1
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEe
Q 022463 122 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 122 ~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD 167 (297)
.+++.+.+...+.++|++.. +.....-...|..+|++++++++.-
T Consensus 32 ~~~v~kal~~gka~lViiA~-D~~~~~~~~~l~~lc~~~~Vp~~~~ 76 (119)
T 1rlg_A 32 TNETTKAVERGLAKLVYIAE-DVDPPEIVAHLPLLCEEKNVPYIYV 76 (119)
T ss_dssp HHHHHHHHTTTCCSEEEEES-CCSCSTTTTHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHcCCCcEEEEeC-CCChHHHHHHHHHHHHHcCCCEEEe
Confidence 45677788776788888821 1111111467888999999886543
No 336
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=30.89 E-value=32 Score=30.01 Aligned_cols=50 Identities=2% Similarity=-0.162 Sum_probs=41.1
Q ss_pred CcCC-HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEe
Q 022463 118 GYID-YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 118 ~~~d-~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD 167 (297)
...+ ++++++.+.....++|.+.....|.+....+|.++|+++|+.+++=
T Consensus 259 ~~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 309 (382)
T 1rvk_A 259 SAAGKHWHRAEWIKAGACDILRTGVNDVGGITPALKTMHLAEAFGMECEVH 309 (382)
T ss_dssp SCSSHHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEEC
T ss_pred CccCcHHHHHHHHHcCCCCEEeeCchhcCCHHHHHHHHHHHHHcCCeEeec
Confidence 3456 8889988887567888886656888999999999999999988876
No 337
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=30.68 E-value=69 Score=24.10 Aligned_cols=46 Identities=7% Similarity=-0.057 Sum_probs=34.9
Q ss_pred HHHHHhhhcCCcEEEEcCC--CCCC-cccHHHHHHHHHhcCCEEEEehh
Q 022463 124 QLEKSATLFRPKLIVAGAS--AYAR-LYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 124 ~l~~~l~~~~~~~v~~~~~--~~G~-~~~~~~i~~la~~~g~~livD~a 169 (297)
++.+.|.+.+..+|+..+. +-.. ..|...|+++|-.||++++---+
T Consensus 73 ~I~d~I~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~la 121 (152)
T 1b93_A 73 QVGALISEGKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNVA 121 (152)
T ss_dssp HHHHHHHTTCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESSHH
T ss_pred hHHHHHHCCCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeCHH
Confidence 5777888768888887433 3222 56788999999999999997654
No 338
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=30.56 E-value=49 Score=29.65 Aligned_cols=47 Identities=9% Similarity=0.019 Sum_probs=29.2
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEE
Q 022463 120 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 120 ~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~liv 166 (297)
.+++++.+.+...-..+|.+.....|.+.+..++.++|+++|+.+++
T Consensus 333 ~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~ia~lA~~~g~~v~~ 379 (444)
T 1w6t_A 333 TNTDYLARGIQEGAANSILIKVNQIGTLTETFEAIEMAKEAGYTAVV 379 (444)
T ss_dssp TCHHHHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHcCCCCEEEEcccccCCHHHHHHHHHHHHHCCCeEEe
Confidence 34555555555423455555444456677777788888888877766
No 339
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=30.35 E-value=51 Score=29.34 Aligned_cols=45 Identities=7% Similarity=0.053 Sum_probs=31.9
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEE
Q 022463 122 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 122 ~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~liv 166 (297)
++++++.+...-..+|.+..+..|.+.+..++.++|+++|+.+++
T Consensus 317 ~~~~~~~i~~~a~d~i~iKv~qiGGiTea~kia~lA~~~G~~v~v 361 (417)
T 3qn3_A 317 EDILREGIIKKMANAVLIKPNQIGTITQTMRTVRLAQRNNYKCVM 361 (417)
T ss_dssp HHHHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHhCCCCEEEecCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 566666666534556666444567778888888999999988876
No 340
>3bzs_A ESCU; auto cleavage protein, intein, T3SS, TTSS, asparagine cycliz membrane, membrane protein, protein transport; 1.48A {Escherichia coli} PDB: 3bzr_A 3bzp_A 3bzt_A 3c03_A
Probab=30.28 E-value=27 Score=25.86 Aligned_cols=19 Identities=16% Similarity=0.211 Sum_probs=17.1
Q ss_pred HHHHHHHHhcCCEEEEehh
Q 022463 151 ERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 151 ~~i~~la~~~g~~livD~a 169 (297)
.+|.++|+++|++++.|-.
T Consensus 84 ~~I~e~A~e~gVPi~e~~~ 102 (137)
T 3bzs_A 84 LQIIKLAELYDIPVIEDIP 102 (137)
T ss_dssp HHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHcCCCEEeCHH
Confidence 4899999999999999963
No 341
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=30.25 E-value=38 Score=29.27 Aligned_cols=51 Identities=8% Similarity=0.050 Sum_probs=41.1
Q ss_pred CcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEeh
Q 022463 118 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 118 ~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~ 168 (297)
...+++++++.+.....++|.+..+..|-..+..+|.++|+++|+.+.+-+
T Consensus 242 ~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~ 292 (354)
T 3jva_A 242 SCFDAQDALELVKKGTVDVINIKLMKCGGIHEALKINQICETAGIECMIGC 292 (354)
T ss_dssp TCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred CcCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCeEEecC
Confidence 355778888888765678888866668888889999999999999998754
No 342
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=29.96 E-value=92 Score=21.35 Aligned_cols=44 Identities=18% Similarity=0.129 Sum_probs=30.4
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEe
Q 022463 122 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 122 ~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD 167 (297)
.+.+.++++..+.++|++. ++.. ..-.+.+..+|+.++++++.-
T Consensus 24 ~~~v~kai~~gka~lViiA-~D~~-~~~~~~i~~~c~~~~vp~~~~ 67 (101)
T 3v7q_A 24 EDLVIKEIRNARAKLVLLT-EDAS-SNTAKKVTDKCNYYKVPYKKV 67 (101)
T ss_dssp HHHHHHHHHTTCCSEEEEE-TTSC-HHHHHHHHHHHHHTTCCEEEE
T ss_pred hhhhHHHHhcCceeEEEEe-cccc-ccchhhhcccccccCCCeeee
Confidence 4677888887688888882 1111 123567888899999987654
No 343
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A*
Probab=29.68 E-value=27 Score=34.22 Aligned_cols=26 Identities=19% Similarity=0.227 Sum_probs=22.1
Q ss_pred CCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 144 YARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 144 ~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
+|+..+++++.+.||++|+.||.|.+
T Consensus 689 ~Gt~~df~~lv~~~H~~GI~VilD~V 714 (844)
T 3aie_A 689 YGTADDLVKAIKALHSKGIKVMADWV 714 (844)
T ss_dssp TBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 45566788999999999999999975
No 344
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=29.60 E-value=72 Score=26.45 Aligned_cols=40 Identities=8% Similarity=0.083 Sum_probs=26.5
Q ss_pred hcCCcEEEEc-CCCCCCc---ccHHHHHHHHHhcCCEEEEehhhhc
Q 022463 131 LFRPKLIVAG-ASAYARL---YDYERIRKVCNKQKAIMLADMAHIS 172 (297)
Q Consensus 131 ~~~~~~v~~~-~~~~G~~---~~~~~i~~la~~~g~~livD~a~~~ 172 (297)
..++.+++++ .++++.. .++..|..+.+. + ++++|++|+.
T Consensus 144 ~GN~~i~L~~rG~~~~y~~~~~dl~~i~~lk~~-~-pVivD~sH~~ 187 (267)
T 2nwr_A 144 GGAKEIYLTERGTTFGYNNLVVDFRSLPIMKQW-A-KVIYDATHSV 187 (267)
T ss_dssp TTCSSEEEEECCEECSSSCEECCTTHHHHHTTT-S-EEEEETTGGG
T ss_pred cCCCeEEEEECCCCCCCCccccCHHHHHHHHHc-C-CEEEcCCccc
Confidence 3456777772 3334432 577777776554 7 9999999985
No 345
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=29.47 E-value=1e+02 Score=22.67 Aligned_cols=52 Identities=21% Similarity=0.269 Sum_probs=35.0
Q ss_pred CcCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHH-HHHHHH----HhcCCE-EEEehh
Q 022463 118 GYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYE-RIRKVC----NKQKAI-MLADMA 169 (297)
Q Consensus 118 ~~~d~~~l~~~l~~~~~~~v~~~-~~~-~G~~~~~~-~i~~la----~~~g~~-livD~a 169 (297)
...+.+.|.+.+.+.++..|+++ |-| .|+..+.. .+.+++ +..+++ ..+|+-
T Consensus 38 ~~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~~lpV~~~DER 97 (138)
T 1nu0_A 38 GTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDER 97 (138)
T ss_dssp TEECHHHHHHHHHHHCCSEEEEEEEECTTSCBCHHHHHHHHHHHHHHHHHCCCEEEEEEE
T ss_pred cchHHHHHHHHHHHcCCCEEEEecccCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCC
Confidence 45688999999998899999885 555 57666543 333333 345655 667874
No 346
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=29.43 E-value=57 Score=27.93 Aligned_cols=51 Identities=8% Similarity=0.014 Sum_probs=41.5
Q ss_pred CcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEeh
Q 022463 118 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 118 ~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~ 168 (297)
...+..++.+.+.....+++.+.+...|-..+..+|.++|+++|+.+.+=+
T Consensus 222 s~~~~~~~~~~i~~~a~d~i~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~ 272 (342)
T 2okt_A 222 KATSLLDIINLIELYNVKVVVLKPFRLGGIDKVQTAIDTLKSHGAKVVIGG 272 (342)
T ss_dssp TCCCHHHHHHHHHHSCCCEEEECHHHHTSGGGHHHHHHHHHHTTCEEEEBC
T ss_pred CCCCHHHHHHHHHhCCCCEEEEChhhcCCHHHHHHHHHHHHHCCCEEEEcC
Confidence 345788888888874577888766668889999999999999999988764
No 347
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=29.20 E-value=56 Score=29.41 Aligned_cols=46 Identities=7% Similarity=-0.070 Sum_probs=32.4
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEE
Q 022463 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 121 d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~liv 166 (297)
+++++++.+...-..++.+-.+..|.+.+.-++.++|+++|..+++
T Consensus 336 n~~~i~~~Ie~~a~n~IlIKvnQIGgITEalka~~lA~~~G~~vmv 381 (452)
T 3otr_A 336 NILRIEKALKDKACNCLLLKVNQIGSVTEAIEACLLAQKSGWGVQV 381 (452)
T ss_dssp CHHHHHHHHHHTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHhcCCCCEEEeeccccccHHHHHHHHHHHHHcCCeEEE
Confidence 4566666665534456666444567888888999999999988777
No 348
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=29.11 E-value=1.3e+02 Score=25.74 Aligned_cols=37 Identities=11% Similarity=0.102 Sum_probs=28.2
Q ss_pred CCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 133 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 133 ~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
+.++++++....+....+.++.+.|+++|+++++|-.
T Consensus 186 ~~~~v~~~g~~~~~~~~~~~~~~~a~~~g~~v~~D~~ 222 (352)
T 4e84_A 186 QHDVVLMSDYAKGGLTHVTTMIEKARAAGKAVLVDPK 222 (352)
T ss_dssp GCSEEEEECCSSSSCSSHHHHHHHHHHTTCEEEEECC
T ss_pred cCCEEEEeCCCCCCHHHHHHHHHHHHhcCCEEEEECC
Confidence 4778888422234555688999999999999999974
No 349
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=29.00 E-value=26 Score=32.93 Aligned_cols=25 Identities=8% Similarity=0.081 Sum_probs=21.5
Q ss_pred CCcccHHHHHHHHHhcCCEEEEehh
Q 022463 145 ARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 145 G~~~~~~~i~~la~~~g~~livD~a 169 (297)
|+..+++++.+.||++|+.||.|.+
T Consensus 202 Gt~~~~~~lv~~~H~~Gi~VilD~V 226 (617)
T 1m7x_A 202 GTRDDFRYFIDAAHAAGLNVILDWV 226 (617)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 4556788999999999999999975
No 350
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=28.93 E-value=40 Score=29.57 Aligned_cols=52 Identities=8% Similarity=0.005 Sum_probs=41.4
Q ss_pred CcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 118 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 118 ~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
...+++++++.+......+|.+.....|......++.++|+++|+.+++=+.
T Consensus 253 ~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~ 304 (391)
T 2qgy_A 253 KQSGLVHFRELISRNAADIFNPDISGMGGLIDIIEISNEASNNGIFISPHCW 304 (391)
T ss_dssp TCCSHHHHHHHHHTTCCSEECCBTTTSSCHHHHHHHHHHHHHTTCEECCBCC
T ss_pred CcCCHHHHHHHHHcCCCCEEEECcchhCCHHHHHHHHHHHHHCCCEEeccCC
Confidence 3456788888887645677777666689999999999999999998877643
No 351
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=28.90 E-value=53 Score=29.42 Aligned_cols=46 Identities=2% Similarity=-0.053 Sum_probs=33.9
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEE
Q 022463 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 121 d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~liv 166 (297)
+++++.+.+...-...|.+..+..|.+.+..++.++|+++|+.+++
T Consensus 326 ~~~~~~~~i~~~a~d~i~ikv~qiGGitea~~ia~lA~~~g~~~~~ 371 (436)
T 2al1_A 326 NPKRIATAIEKKAADALLLKVNQIGTLSESIKAAQDSFAAGWGVMV 371 (436)
T ss_dssp CHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHcCCeEEE
Confidence 5677777776533566666555578888888999999999988766
No 352
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=28.80 E-value=38 Score=29.36 Aligned_cols=50 Identities=4% Similarity=-0.090 Sum_probs=40.2
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEeh
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~ 168 (297)
..+++++++.+......+|.+.....|......++.++|+++|+.+++=+
T Consensus 248 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 297 (370)
T 1nu5_A 248 LSSLSSAFELARDHAVDAFSLKLCNMGGIANTLKVAAVAEAAGISSYGGT 297 (370)
T ss_dssp CCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECC
T ss_pred CCCHHHHHHHHHhCCCCEEEEchhhcCCHHHHHHHHHHHHHcCCcEEecC
Confidence 45778888888764578888865567888899999999999999987653
No 353
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=28.71 E-value=3e+02 Score=24.11 Aligned_cols=84 Identities=13% Similarity=0.123 Sum_probs=53.2
Q ss_pred CCcCCHHHHHHHhh---h-cCCcEEEE-cCCCCC---CcccHHHHHHHHHhc-CCEEEEehhhhccc-ccc-cCCCCCCC
Q 022463 117 TGYIDYDQLEKSAT---L-FRPKLIVA-GASAYA---RLYDYERIRKVCNKQ-KAIMLADMAHISGL-VAA-GVIPSPFE 185 (297)
Q Consensus 117 ~~~~d~~~l~~~l~---~-~~~~~v~~-~~~~~G---~~~~~~~i~~la~~~-g~~livD~a~~~g~-~~~-~~~~~~~~ 185 (297)
+|.-++++++.++. . .+..++++ +.+.|+ ...++..|..+.+.+ +++| .|-.|+.|- ... --...
T Consensus 165 tGmaTl~Ei~~Ave~i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~~lpV-G~SdHt~G~~~~~~AAvAl--- 240 (385)
T 1vli_A 165 TAGAEISDVHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPEAVI-GFSDHSEHPTEAPCAAVRL--- 240 (385)
T ss_dssp CTTCCHHHHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHSTTSEE-EEEECCSSSSHHHHHHHHT---
T ss_pred CCCCCHHHHHHHHHHHHHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHHHcCCCCE-EeCCCCCCchHHHHHHHHc---
Confidence 34447777777654 2 23477777 455565 345788999999999 8887 678888772 110 00011
Q ss_pred CccEE--EecCCccCCCCCce
Q 022463 186 YADVV--TTTTHKSLRGPRGA 204 (297)
Q Consensus 186 ~~D~~--~~s~~K~l~gp~gG 204 (297)
|||++ -++..|.+.||-+.
T Consensus 241 GA~iIEkHftldra~~G~D~~ 261 (385)
T 1vli_A 241 GAKLIEKHFTIDKNLPGADHS 261 (385)
T ss_dssp TCSEEEEEBCSCTTSSCSSCT
T ss_pred CCCEEEeCCCccccCCCCchh
Confidence 77865 46677888776663
No 354
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=28.36 E-value=54 Score=29.17 Aligned_cols=45 Identities=7% Similarity=0.080 Sum_probs=25.8
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEE
Q 022463 122 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 122 ~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~liv 166 (297)
+.++.+.+...-..+|.+.....|.+.+..+|.++|+++|+.+++
T Consensus 321 ~~~~~~~i~~~a~d~i~ik~~~~GGitea~~ia~lA~~~g~~~~~ 365 (427)
T 2pa6_A 321 VERLRKGIEMKAANALLLKVNQIGTLSEAVDAAQLAFRNGYGVVV 365 (427)
T ss_dssp HHHHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHhCCCCEEEEcccccCCHHHHHHHHHHHHHcCCeEEE
Confidence 455555554423455555433456666666777777777776655
No 355
>3u5e_c L32, RP73, YL38, 60S ribosomal protein L30; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_f 3izs_f 3o58_Z 3o5h_Z 1t0k_B 3u5i_c 4b6a_c 1ck2_A 1cn7_A 1nmu_B* 3jyw_2
Probab=28.35 E-value=1.1e+02 Score=21.19 Aligned_cols=43 Identities=19% Similarity=0.138 Sum_probs=31.0
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEE
Q 022463 122 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 122 ~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~liv 166 (297)
.++..++|+..+.++|++.. +.+ ..-.++|..+|+.++++++.
T Consensus 27 ~~~v~kai~~gkaklVilA~-D~~-~~~~~~i~~~c~~~~ip~~~ 69 (105)
T 3u5e_c 27 YKSTVKSLRQGKSKLIIIAA-NTP-VLRKSELEYYAMLSKTKVYY 69 (105)
T ss_dssp HHHHHHHHHTTCCSEEEECT-TSC-HHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHcCCceEEEEeC-CCC-HHHHHHHHHHHHHcCCCEEE
Confidence 45777888876888998821 221 22357889999999999983
No 356
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=28.34 E-value=90 Score=22.32 Aligned_cols=38 Identities=11% Similarity=0.197 Sum_probs=26.4
Q ss_pred HHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEE
Q 022463 123 DQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 123 ~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~liv 166 (297)
+-++++... .++.++++. |.. -+++.++|+++|+.++-
T Consensus 73 ~~v~e~~~~-g~k~v~~~~---G~~--~~e~~~~a~~~Girvv~ 110 (122)
T 3ff4_A 73 SEYNYILSL-KPKRVIFNP---GTE--NEELEEILSENGIEPVI 110 (122)
T ss_dssp GGHHHHHHH-CCSEEEECT---TCC--CHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHhc-CCCEEEECC---CCC--hHHHHHHHHHcCCeEEC
Confidence 345555555 788877732 322 26999999999999883
No 357
>2jlj_A YSCU, YOP proteins translocation protein U; cell membrane, transmembrane, yersinia pesits, protein trans type III secretion system, membrane; 1.3A {Yersinia pestis} PDB: 2jlh_A* 2v5g_A 2w0r_A
Probab=28.31 E-value=31 Score=25.82 Aligned_cols=19 Identities=16% Similarity=0.441 Sum_probs=17.1
Q ss_pred HHHHHHHHhcCCEEEEehh
Q 022463 151 ERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 151 ~~i~~la~~~g~~livD~a 169 (297)
.+|.++|+++|++++.|-.
T Consensus 83 ~~I~e~A~e~gVPi~e~~~ 101 (144)
T 2jlj_A 83 QTVRKIAEEEGVPILQRIP 101 (144)
T ss_dssp HHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHcCCCEEeCHH
Confidence 5899999999999999963
No 358
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=27.98 E-value=37 Score=29.81 Aligned_cols=50 Identities=6% Similarity=-0.041 Sum_probs=41.0
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEeh
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~ 168 (297)
..+++++++.+......+|.+.....|.+.+..++.++|+++|+.+++=+
T Consensus 249 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 298 (397)
T 2qde_A 249 AQELHDLLAIINKGAADGLMIKTQKAGGLLKAQRWLTLARLANLPVICGC 298 (397)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCCEEECC
T ss_pred cCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEEec
Confidence 45678888888775678888865567888899999999999999988874
No 359
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=27.88 E-value=42 Score=29.29 Aligned_cols=50 Identities=10% Similarity=0.018 Sum_probs=40.6
Q ss_pred CcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEe
Q 022463 118 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 118 ~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD 167 (297)
...+++++++.+.....++|.+.....|-..+..+|.++|+++|+.+.+=
T Consensus 245 ~~~~~~~~~~~l~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~g~~~~~~ 294 (378)
T 3eez_A 245 CLVTLQDAARVARDGLAEVFGIKLNRVGGLTRAARMRDIALTHGIDMFVM 294 (378)
T ss_dssp TCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHcCCEEEcC
Confidence 34577888888876457888886666788889999999999999999864
No 360
>2fc3_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich, ribosome, RNA binding protein; 1.56A {Aeropyrum pernix} SCOP: d.79.3.1 PDB: 3pla_C* 3id5_C* 3hax_D* 2hvy_D* 3hay_D* 3nvi_B 3nmu_C 3nvk_E* 3lwr_C 3lwo_C* 3lwq_C* 3lwp_C 3lwv_C 3hjw_C* 2czw_A 1pxw_A
Probab=27.83 E-value=93 Score=22.26 Aligned_cols=44 Identities=14% Similarity=0.095 Sum_probs=28.2
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEE
Q 022463 122 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 122 ~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~liv 166 (297)
.+++.+.++..+.++|++.. +.....-...|..+|++++++++.
T Consensus 33 ~~~v~kal~~gka~lViiA~-D~~~~~~~~~l~~lc~~~~Vp~~~ 76 (124)
T 2fc3_A 33 TNETTKAVERGLAKLVVIAE-DVDPPEIVMHLPLLCDEKKIPYVY 76 (124)
T ss_dssp HHHHHHHHHTTCCSEEEEET-TCSSGGGTTTHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHcCCceEEEEcC-CCChHHHHHHHHHHHHHcCCCEEE
Confidence 45677788776788888821 111111145777889999988654
No 361
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=27.67 E-value=26 Score=30.30 Aligned_cols=51 Identities=10% Similarity=0.146 Sum_probs=40.6
Q ss_pred CcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEeh
Q 022463 118 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 118 ~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~ 168 (297)
...+++++++.+.....++|.+.....|......++.++|+++|+.+++=+
T Consensus 248 ~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~~ 298 (359)
T 1mdl_A 248 NWLGPEEMFKALSIGACRLAMPDAMKIGGVTGWIRASALAQQFGIPMSSHL 298 (359)
T ss_dssp TCCSHHHHHHHHHTTCCSEECCBTTTTTHHHHHHHHHHHHHHTTCCBCCBS
T ss_pred CCCCHHHHHHHHHcCCCCEEeecchhhCCHHHHHHHHHHHHHcCCeEeecc
Confidence 345688888888764567777766668888889999999999998877763
No 362
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=27.61 E-value=1.2e+02 Score=20.91 Aligned_cols=43 Identities=12% Similarity=0.031 Sum_probs=30.5
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEE
Q 022463 122 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 122 ~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~liv 166 (297)
.++..++++..+.++|++.. +.. ..-.++|..+|++++++++.
T Consensus 27 ~~~v~kai~~gkaklViiA~-D~~-~~~~~~i~~~c~~~~ip~~~ 69 (104)
T 4a18_G 27 YKSTIKAIRNGTAKLVFISN-NCP-TVRKSEIEYYASLAQISIHH 69 (104)
T ss_dssp HHHHHHHHHHTCCCEEEECT-TSC-HHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHcCCceEEEEeC-CCC-HHHHHHHHHHHHHcCCcEEE
Confidence 45778888876888888821 111 12257888899999999883
No 363
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=27.48 E-value=32 Score=32.42 Aligned_cols=25 Identities=8% Similarity=0.123 Sum_probs=21.3
Q ss_pred CCcccHHHHHHHHHhcCCEEEEehh
Q 022463 145 ARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 145 G~~~~~~~i~~la~~~g~~livD~a 169 (297)
|...+++++.+.||++|+.||.|.+
T Consensus 200 G~~~~~~~lv~~~H~~Gi~VilD~V 224 (618)
T 3m07_A 200 GTPDDFKAFIDAAHGYGLSVVLDIV 224 (618)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEeec
Confidence 4455688999999999999999975
No 364
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=27.42 E-value=1.1e+02 Score=24.53 Aligned_cols=35 Identities=11% Similarity=0.226 Sum_probs=28.2
Q ss_pred cCCcEEEEcCCC-CCCcccHHHHHHHHHhcCCEEEE
Q 022463 132 FRPKLIVAGASA-YARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 132 ~~~~~v~~~~~~-~G~~~~~~~i~~la~~~g~~liv 166 (297)
..|.+|++...+ -|......++.++|++||++++.
T Consensus 166 l~Pa~vicEi~~~dG~mar~~~l~~fA~~h~l~~it 201 (217)
T 1g57_A 166 FKPAGVLCELTNDDGTMARAPECIEFANKHNMALVT 201 (217)
T ss_dssp SCSCEEEEEBBCTTSSBCCHHHHHHHHHHTTCEEEE
T ss_pred CCceEEEEEEeCCCCCccCHHHHHHHHHHcCCCEEE
Confidence 368888884224 58999999999999999988764
No 365
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=27.41 E-value=69 Score=26.92 Aligned_cols=38 Identities=11% Similarity=0.181 Sum_probs=28.3
Q ss_pred CcEEEEc-CCCCCCc---ccHHHHHHHHHhcCCEEEEehhhhc
Q 022463 134 PKLIVAG-ASAYARL---YDYERIRKVCNKQKAIMLADMAHIS 172 (297)
Q Consensus 134 ~~~v~~~-~~~~G~~---~~~~~i~~la~~~g~~livD~a~~~ 172 (297)
..+++++ .++|+.. .|+..|..+.+ .+++|++|..|+.
T Consensus 166 ~~i~L~erg~~y~~~~~~vdl~~i~~lk~-~~~pV~~D~sHs~ 207 (288)
T 3tml_A 166 DRFMACERGVSFGYNNLVSDMRSLAIMRE-TNAPVVFDATHSV 207 (288)
T ss_dssp CCEEEEECCEECSSSCEECCHHHHHHGGG-GSSCEEEEHHHHT
T ss_pred CcEEEEeCCCCCCCCcCcCCHHHHHHHHh-cCCcEEEcCCccc
Confidence 5677773 4456633 38888888765 9999999999984
No 366
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=27.38 E-value=40 Score=29.17 Aligned_cols=49 Identities=10% Similarity=-0.031 Sum_probs=39.6
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEe
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD 167 (297)
..+++++++.+.....++|.+.....|.+....++.++|+++|+.+++=
T Consensus 247 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 295 (366)
T 1tkk_A 247 VFTPRQAFEVLQTRSADLINIKLMKAGGISGAEKINAMAEACGVECMVG 295 (366)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCCEEEC
T ss_pred CCCHHHHHHHHHhCCCCEEEeehhhhcCHHHHHHHHHHHHHcCCcEEec
Confidence 4577888888876557888886556788888999999999999988775
No 367
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=27.12 E-value=32 Score=30.17 Aligned_cols=49 Identities=10% Similarity=0.014 Sum_probs=40.0
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEe
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD 167 (297)
..+++++++.+......+|.+.....|.+.+..++.++|+++|+.+++=
T Consensus 259 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h 307 (392)
T 2poz_A 259 VYTRFGFRKIFELQACGIIQPDIGTAGGLMETKKICAMAEAYNMRVAPH 307 (392)
T ss_dssp CCHHHHHHHHHTTTCCSEECCCTTTSSCHHHHHHHHHHHHTTTCEECCC
T ss_pred cCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEecC
Confidence 4467888888876456777776666899999999999999999998874
No 368
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=27.07 E-value=45 Score=29.34 Aligned_cols=49 Identities=8% Similarity=0.049 Sum_probs=39.4
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEe
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD 167 (297)
..+++++++.+......+|.+.....|.+....++.++|+++|+.++.=
T Consensus 256 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h 304 (401)
T 2hzg_A 256 AHNFHMAQHLMDYGRIGFIQIDCGRIGGLGPAKRVADAAQARGITYVNH 304 (401)
T ss_dssp CSSHHHHHHHHHHSCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEEC
T ss_pred cCCHHHHHHHHHCCCCCEEEeCcchhCCHHHHHHHHHHHHHcCCEEecC
Confidence 4567888888877557888885555788888889999999999997765
No 369
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=27.06 E-value=42 Score=29.10 Aligned_cols=48 Identities=6% Similarity=0.026 Sum_probs=37.0
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEE
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~liv 166 (297)
..+++++++.+......+|.+.....|.+....+|.++|+++|+.+++
T Consensus 241 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~ 288 (369)
T 2zc8_A 241 LTGAEKARKAIELGAGRVFNVKPARLGGHGESLRVHALAESAGIPLWM 288 (369)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCHHHHHHHHHhCCCCEEEEchhhhCCHHHHHHHHHHHHHcCCcEEe
Confidence 356777777777645778877555578888889999999999999544
No 370
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A*
Probab=26.92 E-value=29 Score=32.96 Aligned_cols=27 Identities=7% Similarity=0.197 Sum_probs=23.7
Q ss_pred CCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 143 AYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 143 ~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
.+|+..+++++.+-||++|+.||+|.+
T Consensus 156 ~~Gt~~d~~~lv~~~h~~Gi~Vi~D~V 182 (655)
T 3ucq_A 156 DLGTMDDLSALARALRGRGISLVLDLV 182 (655)
T ss_dssp GGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCHHHHHHHHHHHHHCCCEEEEEee
Confidence 367778899999999999999999975
No 371
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=26.92 E-value=60 Score=29.08 Aligned_cols=46 Identities=4% Similarity=0.025 Sum_probs=34.0
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEE
Q 022463 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 121 d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~liv 166 (297)
+++++.+.+...-..+|.+-.+..|.+.+..++.++|+++|+.+++
T Consensus 323 ~~~~~~~~i~~~a~d~i~iKv~qiGGitea~~ia~lA~~~g~~~~~ 368 (439)
T 2akz_A 323 NPKRIERAVEEKACNCLLLKVNQIGSVTEAIQACKLAQENGWGVMV 368 (439)
T ss_dssp CHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHCCCeEEe
Confidence 6677777776633566666554578888888999999999988766
No 372
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=26.87 E-value=95 Score=21.32 Aligned_cols=13 Identities=31% Similarity=0.585 Sum_probs=8.9
Q ss_pred HhcCCCCeEEEec
Q 022463 69 ALLKPHDRIMALD 81 (297)
Q Consensus 69 ~~~~~gd~Vl~~~ 81 (297)
-+.++||.|++..
T Consensus 53 rl~~~GD~vII~a 65 (96)
T 1vc3_B 53 HLVKPGDLVILVA 65 (96)
T ss_dssp GTCCTTCEEEEEE
T ss_pred ccCCCCCEEEEEE
Confidence 3567888877654
No 373
>1vq8_F 50S ribosomal protein L7AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.79.3.1 PDB: 1vq4_F* 1vq5_F* 1vq6_F* 1vq7_F* 1s72_F* 1vq9_F* 1vqk_F* 1vql_F* 1vqm_F* 1vqn_F* 1vqo_F* 1vqp_F* 1yhq_F* 1yi2_F* 1yij_F* 1yit_F* 1yj9_F* 1yjn_F* 1yjw_F* 2otj_F* ...
Probab=26.85 E-value=1e+02 Score=21.92 Aligned_cols=45 Identities=9% Similarity=-0.000 Sum_probs=28.5
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEe
Q 022463 122 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 122 ~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD 167 (297)
.++..+++...+.++|++.. +.....-...|..+|++++++++.-
T Consensus 34 ~~~v~kal~~gka~lViiA~-D~~~~~~~~~l~~lc~~~~Vp~~~~ 78 (120)
T 1vq8_F 34 TNETTKSIERGSAELVFVAE-DVQPEEIVMHIPELADEKGVPFIFV 78 (120)
T ss_dssp HHHHHHHHHHTCCSEEEEES-CCSSGGGTTTHHHHHHTTCCCEEEE
T ss_pred HHHHHHHHHcCCceEEEEeC-CCChHHHHHHHHHHHHhcCCCEEEE
Confidence 45677788776788888821 1111111357778899999886543
No 374
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=26.65 E-value=55 Score=28.83 Aligned_cols=50 Identities=6% Similarity=-0.082 Sum_probs=40.4
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEeh
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~ 168 (297)
..+++++++.+.....++|.+..+..|-..+..+|.++|+++|+.+..-+
T Consensus 270 ~~~~~~~~~~l~~~a~d~v~~d~~~~GGit~~~kia~~A~~~gi~~~~h~ 319 (400)
T 4dxk_A 270 LGSRWAFRDLLETGAAGVVMLDISWCGGLSEARKIASMAEAWHLPVAPHX 319 (400)
T ss_dssp CCHHHHHHHHHHTTCCCEEEECTTTTTHHHHHHHHHHHHHHTTCCEEEC-
T ss_pred cCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 45677888888764578888877778989999999999999999997753
No 375
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=26.28 E-value=80 Score=23.10 Aligned_cols=44 Identities=9% Similarity=0.089 Sum_probs=28.5
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEE
Q 022463 122 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 122 ~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~liv 166 (297)
.+.+.++++..+.++|++. ++.....-++.|..+|++++++++.
T Consensus 46 ~~~v~kal~~gkaklViiA-~D~~~~~~~~~l~~lc~~~~IP~~~ 89 (135)
T 2aif_A 46 ANEATKALNRGIAEIVLLA-ADAEPLEILLHLPLVCEDKNTPYVF 89 (135)
T ss_dssp HHHHHHHHHTTCEEEEEEE-TTCSCHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHcCCCeEEEEe-cCCChHHHHhHHHHHHHhcCCcEEE
Confidence 4567778877567777772 1111111137888999999988764
No 376
>3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A*
Probab=26.18 E-value=35 Score=32.47 Aligned_cols=25 Identities=12% Similarity=0.238 Sum_probs=21.6
Q ss_pred CCcccHHHHHHHHHhcCCEEEEehh
Q 022463 145 ARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 145 G~~~~~~~i~~la~~~g~~livD~a 169 (297)
|+..+++++.+.||++|+.||+|.+
T Consensus 104 Gt~~d~~~lv~~~h~~gi~vi~D~V 128 (669)
T 3k8k_A 104 GTESDFDRLVTEAHNRGIKIYLDYV 128 (669)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEEC
Confidence 4566788999999999999999975
No 377
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=25.89 E-value=32 Score=32.45 Aligned_cols=26 Identities=4% Similarity=0.070 Sum_probs=22.2
Q ss_pred CCCcccHHHHHHHHHhcC--C--EEEEehh
Q 022463 144 YARLYDYERIRKVCNKQK--A--IMLADMA 169 (297)
Q Consensus 144 ~G~~~~~~~i~~la~~~g--~--~livD~a 169 (297)
+|+..+++++.+.||++| + .||.|.+
T Consensus 235 ~Gt~~dfk~LV~~~H~~G~~I~~~VIlD~V 264 (637)
T 1ji1_A 235 FGDNSTLQTLINDIHSTANGPKGYLILDGV 264 (637)
T ss_dssp TCCHHHHHHHHHHHHCSSSSSCCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHhCCCCccceEEEEEC
Confidence 345667889999999999 9 9999985
No 378
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=25.61 E-value=2.2e+02 Score=21.59 Aligned_cols=40 Identities=10% Similarity=0.149 Sum_probs=26.0
Q ss_pred HHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEE
Q 022463 124 QLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 124 ~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~liv 166 (297)
.+...+++ + +++++ .|..|...++-++.+.||++|+.+|.
T Consensus 106 ~~~~~~~~-~-DvvI~-iS~SG~t~~~i~~~~~ak~~g~~vI~ 145 (199)
T 1x92_A 106 QIRALGQP-G-DVLLA-ISTSGNSANVIQAIQAAHDREMLVVA 145 (199)
T ss_dssp HHHHHCCT-T-CEEEE-ECSSSCCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHhCCCC-C-CEEEE-EeCCCCCHHHHHHHHHHHHCCCEEEE
Confidence 34444443 3 33333 34567777888999999999988654
No 379
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=25.37 E-value=96 Score=27.05 Aligned_cols=43 Identities=9% Similarity=0.025 Sum_probs=37.2
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEe
Q 022463 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 121 d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD 167 (297)
+++++++.+.....++|.+. |.+.+..+|.++|+++|+.+++=
T Consensus 254 ~~~~~~~~i~~~~~d~v~ik----GGit~a~~i~~~A~~~gi~~~~~ 296 (389)
T 2oz8_A 254 DLQGKRLLLEAHAADILNVH----GQVTDVMRIGWLAAELGIPISIG 296 (389)
T ss_dssp CHHHHHHHHHTTCCSEEEEC----SCHHHHHHHHHHHHHHTCCEEEC
T ss_pred CHHHHHHHHHcCCCCEEEEC----cCHHHHHHHHHHHHHcCCeEeec
Confidence 88899988887557788775 88888899999999999998887
No 380
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=25.34 E-value=97 Score=25.00 Aligned_cols=35 Identities=11% Similarity=0.184 Sum_probs=28.1
Q ss_pred cCCcEEEEcCCC-CCCcccHHHHHHHHHhcCCEEEE
Q 022463 132 FRPKLIVAGASA-YARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 132 ~~~~~v~~~~~~-~G~~~~~~~i~~la~~~g~~liv 166 (297)
.+|..|++---| -|......++.++|++||++++.
T Consensus 177 l~Pa~VicEi~~ddG~mar~~~l~~fA~~h~l~~it 212 (227)
T 1snn_A 177 LVPITTICEMMGDDGNAMSKNETKRYAEKHNLIYLS 212 (227)
T ss_dssp SCSEEEEEEEBCTTSSBCCHHHHHHHHHHHTCCEEE
T ss_pred CCceEEEEEEeCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 368888873223 59999999999999999998875
No 381
>3o85_A Ribosomal protein L7AE; alpha beta sandwich fold, K-turn RNA binding protein, KINK T ribosomal protein; 1.81A {Giardia lamblia}
Probab=25.29 E-value=1.1e+02 Score=21.84 Aligned_cols=44 Identities=9% Similarity=0.083 Sum_probs=29.1
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCccc-HHHHHHHHHhcCCEEEEe
Q 022463 122 YDQLEKSATLFRPKLIVAGASAYARLYD-YERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 122 ~~~l~~~l~~~~~~~v~~~~~~~G~~~~-~~~i~~la~~~g~~livD 167 (297)
.+...+++...+.++|++.. +.. ... ...+..+|+++|++++.-
T Consensus 36 ~~~v~kai~~gka~lViiA~-D~~-p~~~~~~l~~lc~~~~VP~~~v 80 (122)
T 3o85_A 36 ANEALKQVNRGKAELVIIAA-DAD-PIEIVLHLPLACEDKGVPYVFI 80 (122)
T ss_dssp HHHHHHHHHTTCCSEEEEET-TCS-SGGGGTTHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHcCCceEEEEeC-CCC-hHHHHHHHHHHHHHhCCCEEEE
Confidence 45677888876788988821 111 112 357778999999986553
No 382
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=25.18 E-value=35 Score=30.15 Aligned_cols=50 Identities=4% Similarity=-0.103 Sum_probs=40.8
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEeh
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~ 168 (297)
..+++++++.+......+|.+.....|.+.+..+|.++|+++|+.+++=+
T Consensus 278 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~ 327 (410)
T 2gl5_A 278 SYTRWGYRELLEKQSIAVAQPDLCLCGGITEGKKICDYANIYDTTVQVHV 327 (410)
T ss_dssp CCTTHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCC
T ss_pred cCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeecC
Confidence 44778889888874567777766668999999999999999999988853
No 383
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=25.12 E-value=40 Score=29.61 Aligned_cols=50 Identities=8% Similarity=-0.051 Sum_probs=39.9
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEeh
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~ 168 (297)
..+++++++.+.....++|.+.....|-+.+..+|.++|+++|+.+..-+
T Consensus 256 i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~ 305 (389)
T 3ozy_A 256 LYTRNAFNDYIRNDAIDVLQADASRAGGITEALAISASAASAHLAWNPHT 305 (389)
T ss_dssp CCHHHHHHHHHHTTCCSEECCCTTTSSCHHHHHHHHHHHHHTTCEECCCC
T ss_pred CCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 44677788888764567777767678889999999999999999987753
No 384
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=24.77 E-value=2.1e+02 Score=22.85 Aligned_cols=48 Identities=17% Similarity=0.192 Sum_probs=35.0
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 121 d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
+.++++.++.. ..+.|++..+.......++++.+.++++|+.+++|..
T Consensus 90 ~~~~i~~~~~~-Gad~V~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~ 137 (232)
T 3igs_A 90 FLDDVDALAQA-GAAIIAVDGTARQRPVAVEALLARIHHHHLLTMADCS 137 (232)
T ss_dssp SHHHHHHHHHH-TCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECC
T ss_pred cHHHHHHHHHc-CCCEEEECccccCCHHHHHHHHHHHHHCCCEEEEeCC
Confidence 34677777766 7888877433322336788999999999999999853
No 385
>3b0z_B Flagellar biosynthetic protein FLHB; type III secretion system, protein transport, MEMB protein; 2.45A {Salmonella enterica subsp}
Probab=30.51 E-value=16 Score=26.24 Aligned_cols=19 Identities=21% Similarity=0.286 Sum_probs=17.0
Q ss_pred HHHHHHHHhcCCEEEEehh
Q 022463 151 ERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 151 ~~i~~la~~~g~~livD~a 169 (297)
.+|.++|+++|++++.|-.
T Consensus 30 ~~I~e~A~e~gVPi~e~~~ 48 (114)
T 3b0z_B 30 LRIREIGAEHRVPTLEAPP 48 (114)
Confidence 5899999999999999963
No 386
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=24.60 E-value=53 Score=28.93 Aligned_cols=50 Identities=14% Similarity=0.045 Sum_probs=38.0
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEeh
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~ 168 (297)
..+++++++.+.....++|.+.....|-+.+..+|.++|+++|+.+.+-+
T Consensus 264 ~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~ 313 (400)
T 3mwc_A 264 LISSRVAEFVAKLGISNIWNIKIQRVGGLLEAIKIYKIATDNGIKLWGGT 313 (400)
T ss_dssp CCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred cCCHHHHHHHHhcCCCCEEEEcchhhCCHHHHHHHHHHHHHcCCEEEecC
Confidence 34567777777654567777765567888888999999999999988753
No 387
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=24.58 E-value=2.7e+02 Score=23.17 Aligned_cols=46 Identities=11% Similarity=0.062 Sum_probs=31.3
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcC-CEEEE
Q 022463 120 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK-AIMLA 166 (297)
Q Consensus 120 ~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g-~~liv 166 (297)
-|.+.+.+++.+.++..|+... ....+.....+.+.|++.| +..++
T Consensus 70 ~d~~~l~~~~~~~~~d~Vi~~a-~~~n~~~~~~l~~aa~~~g~v~~~v 116 (346)
T 3i6i_A 70 NEQEAMEKILKEHEIDIVVSTV-GGESILDQIALVKAMKAVGTIKRFL 116 (346)
T ss_dssp TCHHHHHHHHHHTTCCEEEECC-CGGGGGGHHHHHHHHHHHCCCSEEE
T ss_pred CCHHHHHHHHhhCCCCEEEECC-chhhHHHHHHHHHHHHHcCCceEEe
Confidence 3789999999865677776521 1123344578999999998 76555
No 388
>2cyj_A Hypothetical protein PH1505; conserved hypothetical protein, structural genomics, NPPSFA; HET: OCS; 1.50A {Pyrococcus horikoshii} SCOP: c.103.1.1
Probab=24.43 E-value=49 Score=23.67 Aligned_cols=52 Identities=15% Similarity=0.213 Sum_probs=36.2
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEehhhhc
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHIS 172 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~a~~~ 172 (297)
.+++++++..+.. +|.+|+++.-..+...+..++.++.++. -.-++|-..++
T Consensus 47 ~l~~~~~~~ll~~-~~evlliGTG~~~~~~~~~~~~~~l~~~-~ve~M~T~aAc 98 (118)
T 2cyj_A 47 KLDPEELEKYLVE-DFDVLLVGTGIYGMLSLLPESKKLVEDK-EVIEKPTKEAL 98 (118)
T ss_dssp EECHHHHHTTTTS-CCSEEEEEECTTCCCEECHHHHHHTTTS-EEEEECHHHHH
T ss_pred cCCHHHHHHHHhc-CCCEEEECCCCCccccCCHHHHHHHHHC-CcEEeCHHHHH
Confidence 4789999998887 8999999533444455557777887777 45556644443
No 389
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=24.41 E-value=29 Score=32.13 Aligned_cols=25 Identities=8% Similarity=0.154 Sum_probs=20.9
Q ss_pred CCcccHHHHHHHHHhcCCEEEEehh
Q 022463 145 ARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 145 G~~~~~~~i~~la~~~g~~livD~a 169 (297)
|+..+++++.+.||++|+.||.|.+
T Consensus 165 Gt~~d~~~lv~~~h~~Gi~VilD~V 189 (558)
T 3vgf_A 165 GGPEGFRKLVDEAHKKGLGVILDVV 189 (558)
T ss_dssp THHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEEe
Confidence 3345678999999999999999975
No 390
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=24.37 E-value=66 Score=28.07 Aligned_cols=49 Identities=4% Similarity=-0.208 Sum_probs=38.4
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEe
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD 167 (297)
..++.++.+.+.......+.+.....|-+.+..+|.++|+++|+.+.+-
T Consensus 253 ~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~ 301 (381)
T 3fcp_A 253 VATAYDGYQLAQQGFTGAYALKIAKAGGPNSVLALARVAQAAGIGLYGG 301 (381)
T ss_dssp CCSHHHHHHHHHTTCCSEEEECHHHHTSTTHHHHHHHHHHHHTCEEEEC
T ss_pred cCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCceecC
Confidence 4567777777765356777776556788899999999999999998764
No 391
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=24.26 E-value=44 Score=29.39 Aligned_cols=51 Identities=2% Similarity=-0.020 Sum_probs=41.7
Q ss_pred CcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 118 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 118 ~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
...+++++++.+... .++|.+..+..|-+.+..+|.++|+++|+.+..-+.
T Consensus 250 ~~~~~~~~~~~i~~~-~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 300 (393)
T 4dwd_A 250 QTYTLQALKDLILSG-VRMVQPDIVKMGGITGMMQCAALAHAHGVEFVPHQT 300 (393)
T ss_dssp TCCSHHHHHHHHHHT-CCEECCCTTTTTHHHHHHHHHHHHHHHTCEECCCCC
T ss_pred CcCCHHHHHHHHHcC-CCEEEeCccccCCHHHHHHHHHHHHHcCCEEeecCC
Confidence 345788888888885 777777677788888999999999999999887654
No 392
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=24.20 E-value=33 Score=30.25 Aligned_cols=49 Identities=4% Similarity=-0.121 Sum_probs=39.9
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEe
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD 167 (297)
..+++++++.+......+|.+.....|.+.+..+|.++|+++|+.+++=
T Consensus 275 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h 323 (407)
T 2o56_A 275 IYWRWGYRPFLENGSLSVIQPDICTCGGITEVKKICDMAHVYDKTVQIH 323 (407)
T ss_dssp CCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECCC
T ss_pred cCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeec
Confidence 4467888888876456777776666898999999999999999998874
No 393
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=24.17 E-value=1.3e+02 Score=21.20 Aligned_cols=44 Identities=16% Similarity=0.049 Sum_probs=31.5
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEe
Q 022463 122 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 122 ~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD 167 (297)
.++..++|+..+.++|++. ++.+ ..-.++|..+|..++++++.-
T Consensus 31 ~~~t~kai~~gkakLVilA-~D~~-~~~~~~i~~~c~~~~ipv~~~ 74 (112)
T 3iz5_f 31 YKTVLKTLRSSLGKLIILA-NNCP-PLRKSEIETYAMLAKISVHHF 74 (112)
T ss_dssp HHHHHHHHHTTCCSEEEEC-SCCC-HHHHHHHHHHHHHTTCCEECC
T ss_pred HHHHHHHHHcCCceEEEEe-CCCC-HHHHHHHHHHHHHcCCcEEEe
Confidence 4567788887688999982 1222 233578889999999998853
No 394
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=24.07 E-value=54 Score=28.73 Aligned_cols=49 Identities=10% Similarity=-0.082 Sum_probs=39.1
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEe
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD 167 (297)
..+++++++.+.....++|.+..+..|-..+..+|.++|+++|+.+.+=
T Consensus 252 ~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~ 300 (386)
T 3fv9_G 252 IQTETDLIAAIRDDLCDGVGLKVSKQGGITPMLRQRAIAAAAGMVMSVQ 300 (386)
T ss_dssp CCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCHHHHHHHHHhCCCCEEEECccccCCHHHHHHHHHHHHHcCCEEEeC
Confidence 4567788888876456777776666788888899999999999999865
No 395
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=24.01 E-value=43 Score=29.27 Aligned_cols=49 Identities=6% Similarity=-0.094 Sum_probs=39.2
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEe
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD 167 (297)
..+++++++.+......+|.+.....|.+....++.++|+++|+.+++=
T Consensus 245 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 293 (382)
T 2gdq_A 245 MKGPAQYVPLLSQRCLDIIQPDVMHVNGIDEFRDCLQLARYFGVRASAH 293 (382)
T ss_dssp CCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHHTCEECCC
T ss_pred cCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEeec
Confidence 4567888888876456777776666888888899999999999988776
No 396
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=23.75 E-value=59 Score=28.44 Aligned_cols=49 Identities=4% Similarity=-0.039 Sum_probs=37.3
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEe
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD 167 (297)
..+++++++.+.....++|.+.....|-+.+..+|.++|+++|+.+.+-
T Consensus 252 ~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~ 300 (385)
T 3i6e_A 252 VYGPEDMVRAAHEGICDGVSIKIMKSGGLTRAQTVARIAAAHGLMAYGG 300 (385)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEEC
T ss_pred cCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCEEEeC
Confidence 4456777777765456777775555788888889999999999998764
No 397
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=23.75 E-value=2.3e+02 Score=22.60 Aligned_cols=47 Identities=17% Similarity=0.185 Sum_probs=34.5
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 122 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 122 ~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
.++++.++.. ..+.|++..+.......++++.+.++++|+.+++|..
T Consensus 91 ~~~i~~~~~a-Gad~I~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~ 137 (229)
T 3q58_A 91 LQDVDALAQA-GADIIAFDASFRSRPVDIDSLLTRIRLHGLLAMADCS 137 (229)
T ss_dssp HHHHHHHHHH-TCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECS
T ss_pred HHHHHHHHHc-CCCEEEECccccCChHHHHHHHHHHHHCCCEEEEecC
Confidence 4677777765 8888877433322336788999999999999999853
No 398
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=23.74 E-value=60 Score=28.35 Aligned_cols=49 Identities=8% Similarity=0.076 Sum_probs=38.0
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEe
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD 167 (297)
..+++++.+.+......+|.+.....|.+.+..+|.++|+++|+.+++=
T Consensus 261 ~~~~~~~~~~i~~~a~d~i~ik~~~~GGit~~~~i~~~A~~~gi~~~~~ 309 (386)
T 1wue_A 261 IRSLKDCQVALALGSCRSINLKIPRVGGIHEALKIAAFCQENDLLVWLG 309 (386)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEEC
T ss_pred cCCHHHHHHHHHcCCCCEEEEchhhhCCHHHHHHHHHHHHHCCCeEEEC
Confidence 3456777777776446777775555788888899999999999998764
No 399
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=23.72 E-value=44 Score=29.53 Aligned_cols=51 Identities=4% Similarity=0.005 Sum_probs=41.0
Q ss_pred CcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEeh
Q 022463 118 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 118 ~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~ 168 (297)
...+++++++.+.....++|.+..+..|-+.+..+|.++|+++|+.+..-+
T Consensus 237 ~i~~~~~~~~~l~~~a~d~v~~d~~~~GGitea~kia~lA~~~gi~v~~h~ 287 (405)
T 3rr1_A 237 RMFSRFDFKRVLEAGGVSILQPDLSHAGGITECVKIAAMAEAYDVALAPHC 287 (405)
T ss_dssp TCCSHHHHHHHHHHCCCSEECCBTTTTTHHHHHHHHHHHHHTTTCEECCBC
T ss_pred CcCCHHHHHHHHHHhCCCeEEEChhhcCCHHHHHHHHHHHHHcCCEEEeCC
Confidence 345778888888764567777767778888999999999999999987754
No 400
>3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A*
Probab=23.68 E-value=44 Score=33.62 Aligned_cols=26 Identities=15% Similarity=0.190 Sum_probs=22.5
Q ss_pred CCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 144 YARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 144 ~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
+|+..+++++.+.||++|+.||.|.+
T Consensus 909 yGt~edfk~LV~alH~~GI~VIlDvV 934 (1108)
T 3ttq_A 909 YGTDGDLRATIQALHHANMQVMADVV 934 (1108)
T ss_dssp SCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 45666789999999999999999976
No 401
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=23.42 E-value=59 Score=28.42 Aligned_cols=49 Identities=4% Similarity=-0.153 Sum_probs=39.0
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEe
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD 167 (297)
..++.++++.+.......|.+.....|-+.+..+|.++|+++|+.+.+-
T Consensus 254 ~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~ 302 (382)
T 3dgb_A 254 IECVEDAFNLAREGAASVFALKIAKNGGPRATLRTAAIAEAAGIGLYGG 302 (382)
T ss_dssp CSSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEEC
T ss_pred cCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEeec
Confidence 4567778888776456777776656788889999999999999998764
No 402
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=23.32 E-value=38 Score=32.79 Aligned_cols=25 Identities=12% Similarity=0.080 Sum_probs=21.6
Q ss_pred CCcccHHHHHHHHHhcCCEEEEehh
Q 022463 145 ARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 145 G~~~~~~~i~~la~~~g~~livD~a 169 (297)
|+..+++++.+.||++|+.||.|.+
T Consensus 248 Gt~~df~~lv~~~H~~Gi~VilD~V 272 (755)
T 3aml_A 248 GTPEDLKYLVDKAHSLGLRVLMDVV 272 (755)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 4566788999999999999999976
No 403
>1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1
Probab=23.21 E-value=36 Score=32.70 Aligned_cols=27 Identities=11% Similarity=0.215 Sum_probs=23.9
Q ss_pred CCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 143 AYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 143 ~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
.+|...+++++.+.||++|+.||+|.+
T Consensus 61 ~lGt~edfk~LV~aaH~~GIkVIlDvV 87 (720)
T 1iv8_A 61 ELGGEKEYRRLIETAHTIGLGIIQDIV 87 (720)
T ss_dssp TTTHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 467778899999999999999999975
No 404
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=23.10 E-value=39 Score=32.53 Aligned_cols=25 Identities=8% Similarity=0.123 Sum_probs=21.6
Q ss_pred CCcccHHHHHHHHHhcCCEEEEehh
Q 022463 145 ARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 145 G~~~~~~~i~~la~~~g~~livD~a 169 (297)
|+..+++++.+.||++|+.||.|.+
T Consensus 310 Gt~~dfk~lV~~~H~~GI~VilD~V 334 (722)
T 3k1d_A 310 GTPDDFRALVDALHQAGIGVIVDWV 334 (722)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEEE
Confidence 4556788999999999999999976
No 405
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=22.99 E-value=1.2e+02 Score=22.85 Aligned_cols=26 Identities=15% Similarity=0.051 Sum_probs=20.3
Q ss_pred CCCCCCcccHHHHHHHHHhcCCEEEE
Q 022463 141 ASAYARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 141 ~~~~G~~~~~~~i~~la~~~g~~liv 166 (297)
.|..|...++-++.+.++++|+.+|.
T Consensus 94 iS~sG~t~~~~~~~~~ak~~g~~vi~ 119 (187)
T 3sho_A 94 VSVWRYLRDTVAALAGAAERGVPTMA 119 (187)
T ss_dssp ECCSSCCHHHHHHHHHHHHTTCCEEE
T ss_pred EeCCCCCHHHHHHHHHHHHCCCCEEE
Confidence 34567777888999999999987654
No 406
>4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron}
Probab=22.99 E-value=3.2e+02 Score=23.41 Aligned_cols=70 Identities=6% Similarity=0.092 Sum_probs=43.6
Q ss_pred ccccceeeeeeEeeecccCCCCCcCCHHHHHHHhh---hcCCcEEEE---cCCC---C------------CCcccHHHHH
Q 022463 96 TKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAT---LFRPKLIVA---GASA---Y------------ARLYDYERIR 154 (297)
Q Consensus 96 ~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~---~~~~~~v~~---~~~~---~------------G~~~~~~~i~ 154 (297)
..+.+++|..+..+.-++ .....|+++.++.+. +...+-|++ +..+ + +....++++.
T Consensus 29 ~~~~~itgtfld~~~~d~--~~qnWd~~eW~~~~~~mK~~GikyvIl~~~~~~gf~~~pS~~~~~~~~~~p~~Dlv~~~l 106 (340)
T 4h41_A 29 NNGLKITGTFLDEISHDI--PHQNWGEKEWDLDFQHMKRIGIDTVIMIRSGYRKFMTYPSPYLLKKGCYMPSVDLVDMYL 106 (340)
T ss_dssp SCSCCEEEEEECTTCSSS--CCCCCCHHHHHHHHHHHHHTTCCEEEESCSEETTEESSCCHHHHHTTCCCCSBCHHHHHH
T ss_pred cCCccceEEEehhhcCCC--cccCCCHHHHHHHHHHHHHcCCCEEEEEEEeeCCeeccCcccccccCccCCcccHHHHHH
Confidence 345667776665543333 345689999887664 435565555 1111 1 1234488999
Q ss_pred HHHHhcCCEEEEe
Q 022463 155 KVCNKQKAIMLAD 167 (297)
Q Consensus 155 ~la~~~g~~livD 167 (297)
+.|+++|+.|++-
T Consensus 107 ~aa~k~Gmkv~~G 119 (340)
T 4h41_A 107 RLAEKYNMKFYFG 119 (340)
T ss_dssp HHHHHTTCEEEEE
T ss_pred HHHHHhCCeEEEe
Confidence 9999999998773
No 407
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=22.91 E-value=67 Score=28.16 Aligned_cols=50 Identities=4% Similarity=-0.059 Sum_probs=40.7
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEeh
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~ 168 (297)
..+++++++.+......+|.+..+..|-+.+..+|.++|+++|+.+.+-+
T Consensus 247 ~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~ 296 (391)
T 3gd6_A 247 VWSFKQQQEMIKKDAIDIFNISPVFIGGLTSAKKAAYAAEVASKDVVLGT 296 (391)
T ss_dssp CCCHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCEEEecC
Confidence 45778888888764578888866668888899999999999999988743
No 408
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=22.90 E-value=47 Score=29.24 Aligned_cols=52 Identities=10% Similarity=0.059 Sum_probs=41.8
Q ss_pred CcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 118 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 118 ~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
...+++++++.+.....++|.+..+..|-+.+..+|.++|+++|+.+..-+.
T Consensus 260 ~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~kia~~A~~~gi~~~~h~~ 311 (401)
T 3sbf_A 260 LFNNPEEWKSLIANRRIDFIRCHVSQIGGITPALKLGHLCQNFGVRIAWHCA 311 (401)
T ss_dssp TCCSHHHHHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHHTCEECCCCC
T ss_pred ccCCHHHHHHHHhcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 3457888999888645778777666789899999999999999999876543
No 409
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=22.29 E-value=66 Score=28.20 Aligned_cols=49 Identities=10% Similarity=0.023 Sum_probs=36.6
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEe
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD 167 (297)
..+..++.+.+.....+++.+..+..|-+.+..+|.++|+++|+.+.+-
T Consensus 249 ~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~ 297 (388)
T 3qld_A 249 VRSVRELKLTARLGAARVLNVKPGRLGGFGATLRALDVAGEAGMAAWVG 297 (388)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEEC
T ss_pred CCCHHHHHHHHHcCCCCEEEECchhhCCHHHHHHHHHHHHHCCCeEEec
Confidence 3456666666665346677775556788888889999999999998764
No 410
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=22.17 E-value=1.4e+02 Score=24.14 Aligned_cols=52 Identities=12% Similarity=0.103 Sum_probs=37.7
Q ss_pred cCCCCCcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEE
Q 022463 113 LNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 113 ~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~liv 166 (297)
.|| +-..+.+.+++.+.. .+++|.++.+..-+..++.++.+.+++++++++.
T Consensus 18 ~DP-dk~~~~~~l~~~~~~-GtDaI~vGgs~gvt~~~~~~~v~~ik~~~~Piil 69 (235)
T 3w01_A 18 LDP-AKHISDDDLDAICMS-QTDAIMIGGTDDVTEDNVIHLMSKIRRYPLPLVL 69 (235)
T ss_dssp ECT-TSCCCHHHHHHHHTS-SCSEEEECCSSCCCHHHHHHHHHHHTTSCSCEEE
T ss_pred ECC-CCcCCHHHHHHHHHc-CCCEEEECCcCCcCHHHHHHHHHHhcCcCCCEEE
Confidence 453 335577888877665 8999999544333667788888888889988877
No 411
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=22.13 E-value=1.9e+02 Score=23.21 Aligned_cols=47 Identities=13% Similarity=0.073 Sum_probs=33.4
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEe
Q 022463 120 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 120 ~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD 167 (297)
.+.+.+++.+.. .+++|.++.|.--+...+.++.+.+++++++++.=
T Consensus 19 ~~~~~~~~~~~~-GtD~i~vGGs~gvt~~~~~~~v~~ik~~~~Pvvlf 65 (228)
T 3vzx_A 19 LPDEQLEILCES-GTDAVIIGGSDGVTEDNVLRMMSKVRRFLVPCVLE 65 (228)
T ss_dssp CCTTHHHHHHTS-SCSEEEECCCSCCCHHHHHHHHHHHTTSSSCEEEE
T ss_pred CCHHHHHHHHHc-CCCEEEECCcCCCCHHHHHHHHHHhhccCCCEEEe
Confidence 344667776655 89999995443224567788888888899998874
No 412
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=22.13 E-value=52 Score=27.98 Aligned_cols=51 Identities=10% Similarity=0.049 Sum_probs=32.1
Q ss_pred cCCHHHHHHHhhhcCCcEEEE--cCCCCCC------cccHHHHHHHHHhcCCEEEEehh
Q 022463 119 YIDYDQLEKSATLFRPKLIVA--GASAYAR------LYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~--~~~~~G~------~~~~~~i~~la~~~g~~livD~a 169 (297)
.++.++++.+.++....+|=+ .+...|. ...++++.+.|+++|+++|+|--
T Consensus 68 ~~~~~~~~~l~~~~G~N~VRi~~~~~~~~~~~~~~~~~~ld~~v~~a~~~Gi~VilD~H 126 (327)
T 3pzt_A 68 YVNKDSLKWLRDDWGITVFRAAMYTADGGYIDNPSVKNKVKEAVEAAKELGIYVIIDWH 126 (327)
T ss_dssp GCSHHHHHHHHHHTCCSEEEEEEESSTTSTTTCGGGHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred CCCHHHHHHHHHhcCCCEEEEEeEECCCCcccCHHHHHHHHHHHHHHHHCCCEEEEEec
Confidence 355667766554435555544 2221222 23468999999999999999953
No 413
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=21.83 E-value=1.2e+02 Score=20.79 Aligned_cols=14 Identities=7% Similarity=0.413 Sum_probs=9.6
Q ss_pred hhcCCcEEEEcCCC
Q 022463 130 TLFRPKLIVAGASA 143 (297)
Q Consensus 130 ~~~~~~~v~~~~~~ 143 (297)
..++|++|++...|
T Consensus 73 ~~~~P~vV~vd~~N 86 (97)
T 1uhe_A 73 NAHKPSIVLVDEKN 86 (97)
T ss_dssp HHCCCEEEEECTTS
T ss_pred hcCCCEEEEECCCC
Confidence 34688888885444
No 414
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=21.66 E-value=1.7e+02 Score=21.61 Aligned_cols=14 Identities=14% Similarity=0.304 Sum_probs=9.3
Q ss_pred hhcCCcEEEEcCCC
Q 022463 130 TLFRPKLIVAGASA 143 (297)
Q Consensus 130 ~~~~~~~v~~~~~~ 143 (297)
..++|++|++...|
T Consensus 116 ~~~~P~VV~vd~~N 129 (143)
T 1pqh_A 116 RTWRPNVAYFEGDN 129 (143)
T ss_dssp TTCCCEEEEEETTT
T ss_pred ccCCCeEEEECCCC
Confidence 44678888885444
No 415
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=21.58 E-value=67 Score=28.04 Aligned_cols=50 Identities=10% Similarity=0.123 Sum_probs=38.3
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEeh
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~ 168 (297)
..+..++++.+.....+++.+.....|-..+..+|.++|+++|+.+.+-+
T Consensus 248 ~~~~~~~~~~i~~~a~d~v~~k~~~~GGi~~~~~ia~~A~~~gi~~~~~~ 297 (379)
T 3r0u_A 248 VFDAKDAERVIDEQACNMINIKLAKTGGILEAQKIKKLADSAGISCMVGC 297 (379)
T ss_dssp CSSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred cCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCEEEEeC
Confidence 45667777777653467777755567888888999999999999998864
No 416
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=21.51 E-value=62 Score=28.62 Aligned_cols=49 Identities=8% Similarity=0.062 Sum_probs=38.4
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEe
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD 167 (297)
..+++++++.+.....++|.+.....|-+.+..+|.++|+++|+.+..-
T Consensus 261 ~~~~~~~~~~i~~~a~d~v~~d~~~~GGit~~~kia~~A~~~gi~v~~h 309 (412)
T 4e4u_A 261 LTTKYEFHKLLQAGGASILQLNVARVGGLLEAKKIATLAEVHYAQIAPH 309 (412)
T ss_dssp CCHHHHHHHHHHTTCCSEECCCTTTTTSHHHHHHHHHHHHHTTCEECCC
T ss_pred cCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEec
Confidence 3456777777776456777776667888899999999999999998654
No 417
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=21.49 E-value=2.9e+02 Score=21.46 Aligned_cols=91 Identities=7% Similarity=-0.041 Sum_probs=47.1
Q ss_pred EEecCCh-HHHHHHHHHhcCCC-CeEEEecCCCCCcccccccccccccceeeeeeEeeecccCCCCCcCCHHHHHHHhhh
Q 022463 54 VQSLSGS-PSNFQVYTALLKPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL 131 (297)
Q Consensus 54 v~~~sG~-~~~~~~~~~~~~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~ 131 (297)
+++|.++ ..-..++..+++.| -.|++..-. ... ...... ..+..+. .| .-|.+++++++.
T Consensus 26 vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~-~~~---~~~~~~-------~~~~~~~--~D----l~d~~~~~~~~~- 87 (236)
T 3qvo_A 26 VLILGAGGQIARHVINQLADKQTIKQTLFARQ-PAK---IHKPYP-------TNSQIIM--GD----VLNHAALKQAMQ- 87 (236)
T ss_dssp EEEETTTSHHHHHHHHHHTTCTTEEEEEEESS-GGG---SCSSCC-------TTEEEEE--CC----TTCHHHHHHHHT-
T ss_pred EEEEeCCcHHHHHHHHHHHhCCCceEEEEEcC-hhh---hccccc-------CCcEEEE--ec----CCCHHHHHHHhc-
Confidence 6665555 34444777888888 466654311 110 000000 1122332 33 237888998887
Q ss_pred cCCcEEEEcCCCCCCcccHHHHHHHHHhcCCE
Q 022463 132 FRPKLIVAGASAYARLYDYERIRKVCNKQKAI 163 (297)
Q Consensus 132 ~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~ 163 (297)
..++|+.+..........+.+.+.+++.+..
T Consensus 88 -~~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~ 118 (236)
T 3qvo_A 88 -GQDIVYANLTGEDLDIQANSVIAAMKACDVK 118 (236)
T ss_dssp -TCSEEEEECCSTTHHHHHHHHHHHHHHTTCC
T ss_pred -CCCEEEEcCCCCchhHHHHHHHHHHHHcCCC
Confidence 4666664322122223356788888888754
No 418
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=21.46 E-value=71 Score=28.72 Aligned_cols=46 Identities=11% Similarity=0.047 Sum_probs=28.6
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEE
Q 022463 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 121 d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~liv 166 (297)
++.++++.+...-..+|.+..+..|.+.+..++.++|+++|+.+++
T Consensus 344 n~~~~~~~i~~~a~d~i~iKv~~iGGiTea~kia~lA~~~Gi~~~v 389 (449)
T 3uj2_A 344 NTERLNKGIKERCGNSILIKLNQIGTVSETLEAIKMAHKAGYTAVV 389 (449)
T ss_dssp CHHHHHHHHHTTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCeEEE
Confidence 3555555555423455555444456677777888888888887665
No 419
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=21.15 E-value=73 Score=28.46 Aligned_cols=46 Identities=15% Similarity=0.063 Sum_probs=29.3
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEE
Q 022463 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 121 d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~liv 166 (297)
+++++++.+...-..+|.+..+..|.+.+..++.++|+++|+.+++
T Consensus 318 ~~~~~~~~i~~~a~d~i~iKv~~iGGiTealkia~lA~~~G~~~~v 363 (428)
T 3tqp_A 318 NPDILEKGIKKNIANAILVKLNQIGTLTETLATVGLAKSNKYGVII 363 (428)
T ss_dssp CHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEE
Confidence 4555555555423455555444466777777888888888888665
No 420
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=21.06 E-value=59 Score=28.53 Aligned_cols=51 Identities=12% Similarity=0.011 Sum_probs=39.7
Q ss_pred CcCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEeh
Q 022463 118 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 118 ~~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~ 168 (297)
...+..++.+.+.....+++.+.....|-..+..+|.++|+++|+.+.+=+
T Consensus 266 ~~~~~~~~~~~~~~~a~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~~~ 316 (391)
T 4e8g_A 266 SGEDLSTVIRAAGQGLCDGFGMKLTRIGGLQQMAAFRDICEARALPHSCDD 316 (391)
T ss_dssp TCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEeCC
Confidence 345677888888764567777766667888888999999999999987653
No 421
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=20.92 E-value=69 Score=28.24 Aligned_cols=49 Identities=6% Similarity=0.055 Sum_probs=38.2
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEe
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 167 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD 167 (297)
..+++++++.+.....++|.+.....|-..+..+|.++|+++|+.+..-
T Consensus 268 ~~~~~~~~~~i~~~a~d~v~~d~~~~GGit~~~~ia~~A~~~gi~~~~h 316 (404)
T 4e5t_A 268 LCTKYEFSRVLETGAASILQMNLGRVGGLLEAKKIAAMAECHSAQIAPH 316 (404)
T ss_dssp CCHHHHHHHHHHHTCCSEECCCTTTSSCHHHHHHHHHHHHHTTCEECCC
T ss_pred cCCHHHHHHHHHhCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEeec
Confidence 3456777777776456777776667888899999999999999988654
No 422
>3jyw_G 60S ribosomal protein L8(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_G
Probab=20.85 E-value=76 Score=22.50 Aligned_cols=44 Identities=9% Similarity=0.058 Sum_probs=28.7
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEE
Q 022463 122 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 122 ~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~liv 166 (297)
.....+++...+..+|++.. +.....-+..|..+|+++|++++.
T Consensus 30 ~~~v~kaI~~gka~LVvIA~-D~~p~~i~~~l~~lC~~~~VP~~~ 73 (113)
T 3jyw_G 30 LNHVVALIENKKAKLVLIAN-DVDPIELVVFLPALCKKMGVPYAI 73 (113)
T ss_dssp HHHHHHTTTTTCCSEEEECS-CCSSHHHHTTHHHHHHHTTCCCEE
T ss_pred HHHHHHHHHcCCceEEEEeC-CCCHHHHHHHHHHHHHHcCCCEEE
Confidence 46777888876788998821 111111124577899999997655
No 423
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=20.78 E-value=93 Score=27.72 Aligned_cols=46 Identities=4% Similarity=0.068 Sum_probs=28.7
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEE
Q 022463 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 121 d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~liv 166 (297)
+++++++.+...-..+|.+.....|.+.+..++.++|+++|+.+++
T Consensus 327 ~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~i~~lA~~~g~~v~~ 372 (432)
T 2ptz_A 327 NTERIKMAIEKKACNSLLLKINQIGTISEAIASSKLCMENGWSVMV 372 (432)
T ss_dssp CHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEe
Confidence 4455555554423455555443456677777888888888888765
No 424
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=20.77 E-value=43 Score=29.17 Aligned_cols=51 Identities=4% Similarity=0.081 Sum_probs=40.9
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEehh
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~a 169 (297)
..+++++++.+.....++|.+..+..|-..+..+|.++|+++|+.+..-+.
T Consensus 254 ~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 304 (374)
T 3sjn_A 254 LTTRYEFQEFITKSNADIVQPDITRCGGITEMKKIYDIAQMNGTQLIPHGF 304 (374)
T ss_dssp CCHHHHHHHHHHHHCCSEECCBTTTSSHHHHHHHHHHHHHHHTCEECCBCC
T ss_pred cCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 446777888887656778777666788888999999999999999887653
No 425
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=20.72 E-value=36 Score=29.87 Aligned_cols=50 Identities=4% Similarity=0.074 Sum_probs=38.7
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEeh
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~ 168 (297)
..+++++++.+.....++|.+.....|-+.+..+|.++|+++|+.++.-.
T Consensus 267 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~h~ 316 (393)
T 2og9_A 267 LTSAAEHGDLIRHRAADYLMPDAPRVGGITPFLKIASLAEHAGLMLAPHF 316 (393)
T ss_dssp CCSHHHHHHHHHTTCCSEECCCHHHHTSHHHHHHHHHHHHHTTCEECCCS
T ss_pred cCCHHHHHHHHHCCCCCEEeeCccccCCHHHHHHHHHHHHHcCCEEeccC
Confidence 44778888888764567777655557888888999999999999987543
No 426
>3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A
Probab=20.60 E-value=51 Score=33.09 Aligned_cols=25 Identities=16% Similarity=0.061 Sum_probs=21.3
Q ss_pred CCcccHHHHHHHHHhcCCEEEEehh
Q 022463 145 ARLYDYERIRKVCNKQKAIMLADMA 169 (297)
Q Consensus 145 G~~~~~~~i~~la~~~g~~livD~a 169 (297)
|...+++++.+.||++|+.||.|-+
T Consensus 743 Gt~~efk~lV~alH~~GI~VIlDvV 767 (1039)
T 3klk_A 743 GSDEDLRNALQALHKAGLQAIADWV 767 (1039)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 4455788999999999999999976
No 427
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=20.57 E-value=61 Score=26.72 Aligned_cols=20 Identities=10% Similarity=0.262 Sum_probs=17.7
Q ss_pred cHHHHHHHHHhcCCEEEEeh
Q 022463 149 DYERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 149 ~~~~i~~la~~~g~~livD~ 168 (297)
.++++.++|+++|++||.|.
T Consensus 91 ~~d~~~~~a~~~Gi~vil~~ 110 (351)
T 3vup_A 91 DMKDLLDTAKKYNILVFPCL 110 (351)
T ss_dssp HHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHCCCeEEEEe
Confidence 46799999999999999885
No 428
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=20.50 E-value=53 Score=28.10 Aligned_cols=49 Identities=4% Similarity=-0.096 Sum_probs=38.9
Q ss_pred cCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHhcCCEEEEeh
Q 022463 119 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 168 (297)
Q Consensus 119 ~~d~~~l~~~l~~~~~~~v~~~~~~~G~~~~~~~i~~la~~~g~~livD~ 168 (297)
..+++++++.+......+|.+.... |...+..++.++|+++|+.+++=+
T Consensus 244 ~~~~~~~~~~i~~~~~d~v~ik~~~-GGit~~~~i~~~A~~~g~~~~~~~ 292 (345)
T 2zad_A 244 ARTKFDVMRLVKEEAVDYVNIKLMK-SGISDALAIVEIAESSGLKLMIGC 292 (345)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECHHH-HHHHHHHHHHHHHHTTTCEEEECC
T ss_pred cCCHHHHHHHHHhCCCCEEEEeccc-ccHHHHHHHHHHHHHcCCeEEEec
Confidence 4477888888877557888885556 888888899999999999987763
No 429
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=20.38 E-value=1.1e+02 Score=24.81 Aligned_cols=35 Identities=6% Similarity=0.053 Sum_probs=27.2
Q ss_pred cCCcEEEEc-CCC-----------CCCcccHHHHHHHHHhcCCEEEE
Q 022463 132 FRPKLIVAG-ASA-----------YARLYDYERIRKVCNKQKAIMLA 166 (297)
Q Consensus 132 ~~~~~v~~~-~~~-----------~G~~~~~~~i~~la~~~g~~liv 166 (297)
.+|..|++- ..- -|......++.++|++||++++.
T Consensus 166 l~PagVicEi~~~~~~~~~~~~~~dG~mar~~~l~~fA~~h~L~iit 212 (233)
T 1k4i_A 166 KRPVAVISEIVDDGQEVEGRAVRAAPGMLRGDECVAFARRWGLKVCT 212 (233)
T ss_dssp CCSBEEEEEBEECCEECTTSSCEESCEECCHHHHHHHHHHTTCEEEE
T ss_pred CCceEEEEEeCCCcccccccccCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 368888872 111 38889999999999999998775
No 430
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=20.38 E-value=60 Score=27.12 Aligned_cols=51 Identities=8% Similarity=0.022 Sum_probs=30.7
Q ss_pred CCHHHHHHHhhhcCCcEEEE--cCCCCCC------cccHHHHHHHHHhcCCEEEEehhh
Q 022463 120 IDYDQLEKSATLFRPKLIVA--GASAYAR------LYDYERIRKVCNKQKAIMLADMAH 170 (297)
Q Consensus 120 ~d~~~l~~~l~~~~~~~v~~--~~~~~G~------~~~~~~i~~la~~~g~~livD~a~ 170 (297)
++.++++.+.++..-..|=+ .+..-|. ...++++.+.|+++|+++|+|--.
T Consensus 44 ~~~~~~~~l~~~~G~N~VRip~~~~~~~~~~~~~~~~~ld~~v~~a~~~Gi~Vild~H~ 102 (303)
T 7a3h_A 44 VNYESMKWLRDDWGINVFRAAMYTSSGGYIDDPSVKEKVKEAVEAAIDLDIYVIIDWHI 102 (303)
T ss_dssp CSHHHHHHHHHHTCCCEEEEEEESSTTSTTTCTTHHHHHHHHHHHHHHHTCEEEEEEEC
T ss_pred CCHHHHHHHHHhcCCCEEEEEEEeCCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecc
Confidence 45566655543324444444 2222222 234678999999999999999643
Done!