Query 022466
Match_columns 297
No_of_seqs 241 out of 1966
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 03:44:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022466.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022466hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 1.5E-73 3.2E-78 498.9 17.9 252 14-271 2-259 (303)
2 PTZ00480 serine/threonine-prot 100.0 8.9E-67 1.9E-71 485.2 27.7 260 14-273 10-277 (320)
3 KOG0374 Serine/threonine speci 100.0 2.8E-67 6.1E-72 490.1 21.8 274 10-283 4-296 (331)
4 KOG0373 Serine/threonine speci 100.0 3E-67 6.5E-72 453.2 15.6 269 13-287 4-286 (306)
5 cd07420 MPP_RdgC Drosophila me 100.0 1.6E-65 3.6E-70 477.2 27.6 267 10-282 2-309 (321)
6 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 8.4E-66 1.8E-70 475.6 24.1 266 15-280 2-276 (293)
7 PTZ00244 serine/threonine-prot 100.0 1.6E-65 3.5E-70 473.4 25.6 272 14-285 3-289 (294)
8 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 1.6E-64 3.5E-69 465.4 25.1 253 15-273 2-260 (285)
9 PTZ00239 serine/threonine prot 100.0 3.7E-64 8E-69 465.8 25.8 253 15-273 3-262 (303)
10 cd07416 MPP_PP2B PP2B, metallo 100.0 3.7E-63 8E-68 460.6 27.3 261 15-280 3-282 (305)
11 smart00156 PP2Ac Protein phosp 100.0 2E-63 4.4E-68 455.9 25.0 249 33-281 1-255 (271)
12 cd07417 MPP_PP5_C PP5, C-termi 100.0 8.4E-63 1.8E-67 459.5 25.6 268 9-282 10-289 (316)
13 cd07418 MPP_PP7 PP7, metalloph 100.0 4.5E-60 9.7E-65 447.2 27.8 276 8-284 5-352 (377)
14 cd07419 MPP_Bsu1_C Arabidopsis 100.0 2E-60 4.4E-65 443.7 24.4 263 19-281 2-297 (311)
15 KOG0375 Serine-threonine phosp 100.0 2.1E-60 4.6E-65 434.6 13.9 262 31-292 59-353 (517)
16 KOG0371 Serine/threonine prote 100.0 7.3E-59 1.6E-63 409.0 13.0 265 14-284 19-296 (319)
17 KOG0377 Protein serine/threoni 100.0 1.5E-48 3.2E-53 364.2 12.1 258 10-273 116-408 (631)
18 KOG0376 Serine-threonine phosp 100.0 5.2E-42 1.1E-46 326.0 10.9 243 31-274 181-434 (476)
19 cd00144 MPP_PPP_family phospho 100.0 9.9E-34 2.1E-38 251.4 18.3 200 63-273 1-212 (225)
20 PRK13625 bis(5'-nucleosyl)-tet 100.0 1.5E-27 3.2E-32 216.0 14.8 122 60-183 1-146 (245)
21 PRK00166 apaH diadenosine tetr 99.9 4.7E-26 1E-30 209.1 14.8 204 60-271 1-247 (275)
22 cd07413 MPP_PA3087 Pseudomonas 99.9 2.1E-25 4.6E-30 199.1 16.2 115 63-180 2-143 (222)
23 cd07423 MPP_PrpE Bacillus subt 99.9 3.4E-25 7.3E-30 199.2 17.1 120 60-182 1-142 (234)
24 cd07425 MPP_Shelphs Shewanella 99.9 2.3E-25 4.9E-30 197.1 14.8 162 63-259 1-183 (208)
25 cd07422 MPP_ApaH Escherichia c 99.9 3E-25 6.5E-30 201.8 13.5 119 62-184 1-126 (257)
26 TIGR00668 apaH bis(5'-nucleosy 99.9 3.2E-24 6.9E-29 196.0 13.7 121 60-184 1-128 (279)
27 PRK11439 pphA serine/threonine 99.9 9.1E-24 2E-28 188.0 15.6 175 60-271 17-206 (218)
28 PHA02239 putative protein phos 99.9 4.8E-23 1E-27 185.3 16.0 171 60-271 1-219 (235)
29 cd07424 MPP_PrpA_PrpB PrpA and 99.9 8E-23 1.7E-27 180.4 15.4 168 60-258 1-183 (207)
30 cd07421 MPP_Rhilphs Rhilph pho 99.9 9.2E-23 2E-27 186.9 14.9 149 60-213 2-243 (304)
31 PRK09968 serine/threonine-spec 99.9 6.9E-22 1.5E-26 176.0 10.6 115 60-180 15-144 (218)
32 PF00149 Metallophos: Calcineu 99.5 6.3E-13 1.4E-17 108.4 12.8 159 60-254 1-199 (200)
33 cd00841 MPP_YfcE Escherichia c 99.2 1.7E-10 3.6E-15 96.6 10.8 84 61-181 1-87 (155)
34 PRK09453 phosphodiesterase; Pr 99.1 2E-10 4.4E-15 99.2 9.4 69 60-132 1-77 (182)
35 TIGR00040 yfcE phosphoesterase 99.1 4.1E-10 9E-15 94.9 11.0 63 60-131 1-64 (158)
36 PF12850 Metallophos_2: Calcin 99.1 3.4E-10 7.4E-15 94.0 9.9 125 60-259 1-125 (156)
37 cd07397 MPP_DevT Myxococcus xa 99.0 2.6E-09 5.7E-14 96.1 10.7 156 61-255 2-208 (238)
38 cd07379 MPP_239FB Homo sapiens 99.0 3E-09 6.4E-14 87.3 9.4 118 61-259 1-120 (135)
39 cd00838 MPP_superfamily metall 98.9 1.7E-08 3.6E-13 79.9 10.1 117 63-259 1-119 (131)
40 cd07388 MPP_Tt1561 Thermus the 98.7 3.4E-08 7.4E-13 88.4 7.5 71 60-131 5-75 (224)
41 cd07394 MPP_Vps29 Homo sapiens 98.7 2.4E-07 5.2E-12 80.1 11.3 110 61-256 1-119 (178)
42 cd07392 MPP_PAE1087 Pyrobaculu 98.6 1E-06 2.2E-11 75.3 14.3 65 62-132 1-66 (188)
43 COG0639 ApaH Diadenosine tetra 98.6 2.5E-08 5.5E-13 81.0 3.9 129 133-262 3-140 (155)
44 cd07403 MPP_TTHA0053 Thermus t 98.6 8E-07 1.7E-11 72.7 10.8 107 63-259 1-107 (129)
45 cd07400 MPP_YydB Bacillus subt 98.5 2.8E-06 6E-11 70.0 12.0 118 62-260 1-130 (144)
46 cd07404 MPP_MS158 Microscilla 98.5 9.9E-07 2.1E-11 74.6 9.2 67 62-131 1-68 (166)
47 PRK05340 UDP-2,3-diacylglucosa 98.3 2.4E-06 5.3E-11 77.0 8.9 175 60-256 1-200 (241)
48 TIGR01854 lipid_A_lpxH UDP-2,3 98.3 2.3E-06 4.9E-11 76.8 7.5 177 62-259 1-201 (231)
49 COG0622 Predicted phosphoester 98.2 8.5E-06 1.8E-10 70.1 9.7 118 60-256 2-122 (172)
50 PRK11340 phosphodiesterase Yae 98.2 2.7E-06 5.9E-11 78.2 6.7 70 60-131 50-125 (271)
51 cd07385 MPP_YkuE_C Bacillus su 98.2 2.8E-06 6.1E-11 74.9 6.2 71 60-132 2-77 (223)
52 cd07383 MPP_Dcr2 Saccharomyces 98.1 5.4E-05 1.2E-09 66.1 12.9 70 60-129 3-87 (199)
53 cd07399 MPP_YvnB Bacillus subt 98.1 2.8E-05 6.1E-10 68.9 10.4 147 61-254 2-160 (214)
54 TIGR03729 acc_ester putative p 98.0 1E-05 2.2E-10 72.8 6.4 68 61-131 1-74 (239)
55 cd07396 MPP_Nbla03831 Homo sap 97.9 2.9E-05 6.3E-10 71.0 7.2 72 61-132 2-87 (267)
56 TIGR00619 sbcd exonuclease Sbc 97.9 2.7E-05 5.9E-10 70.9 6.8 72 60-131 1-88 (253)
57 PHA02546 47 endonuclease subun 97.8 4.1E-05 8.8E-10 72.7 6.5 72 60-131 1-89 (340)
58 cd07402 MPP_GpdQ Enterobacter 97.7 9.1E-05 2E-09 66.0 7.3 69 61-131 1-83 (240)
59 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.7 0.0001 2.2E-09 67.6 7.0 70 62-132 1-87 (262)
60 cd07391 MPP_PF1019 Pyrococcus 97.7 0.00011 2.5E-09 62.7 6.9 58 75-132 30-89 (172)
61 COG2908 Uncharacterized protei 97.6 0.00011 2.3E-09 65.9 5.9 172 64-260 2-204 (237)
62 cd07398 MPP_YbbF-LpxH Escheric 97.6 0.0002 4.2E-09 62.8 7.5 69 63-132 1-83 (217)
63 PRK04036 DNA polymerase II sma 97.6 0.00012 2.5E-09 73.2 6.6 114 59-179 243-388 (504)
64 KOG0376 Serine-threonine phosp 97.6 1.5E-05 3.2E-10 77.4 0.2 216 31-254 13-261 (476)
65 cd00840 MPP_Mre11_N Mre11 nucl 97.6 0.00012 2.7E-09 64.1 5.7 73 61-133 1-91 (223)
66 PRK11148 cyclic 3',5'-adenosin 97.6 0.00018 3.8E-09 66.1 6.6 71 59-131 14-98 (275)
67 PRK10966 exonuclease subunit S 97.5 0.00019 4.2E-09 69.8 6.7 72 60-132 1-88 (407)
68 cd07390 MPP_AQ1575 Aquifex aeo 97.5 0.00023 5E-09 60.6 5.6 67 62-133 1-84 (168)
69 TIGR00024 SbcD_rel_arch putati 97.4 0.00041 8.9E-09 62.2 6.8 69 60-132 15-103 (225)
70 COG2129 Predicted phosphoester 97.4 0.0062 1.4E-07 54.2 13.9 182 59-263 3-195 (226)
71 cd08165 MPP_MPPE1 human MPPE1 97.4 0.00024 5.2E-09 60.0 4.7 47 85-131 37-89 (156)
72 TIGR00583 mre11 DNA repair pro 97.3 0.00053 1.1E-08 66.7 7.1 73 60-132 4-124 (405)
73 cd07393 MPP_DR1119 Deinococcus 97.3 0.00044 9.6E-09 62.0 6.1 67 62-130 1-83 (232)
74 COG1409 Icc Predicted phosphoh 97.3 0.00088 1.9E-08 60.8 7.8 75 60-135 1-82 (301)
75 cd07401 MPP_TMEM62_N Homo sapi 97.1 0.0011 2.5E-08 60.3 6.4 70 62-131 2-89 (256)
76 COG0420 SbcD DNA repair exonuc 97.0 0.0013 2.9E-08 63.4 6.3 73 60-132 1-89 (390)
77 cd07395 MPP_CSTP1 Homo sapiens 97.0 0.0019 4.2E-08 58.6 6.9 71 61-131 6-99 (262)
78 cd07386 MPP_DNA_pol_II_small_a 96.8 0.0018 3.9E-08 58.3 5.4 68 63-132 2-95 (243)
79 cd00839 MPP_PAPs purple acid p 96.8 0.0014 3E-08 60.3 4.1 69 60-132 5-82 (294)
80 COG1408 Predicted phosphohydro 96.7 0.0033 7.1E-08 58.4 5.9 71 60-132 45-119 (284)
81 cd08163 MPP_Cdc1 Saccharomyces 96.7 0.053 1.1E-06 49.6 13.6 24 230-253 203-226 (257)
82 cd07380 MPP_CWF19_N Schizosacc 96.6 0.0055 1.2E-07 51.5 6.2 119 63-254 1-121 (150)
83 cd07384 MPP_Cdc1_like Saccharo 96.6 0.0032 6.9E-08 54.0 4.8 50 83-132 42-101 (171)
84 cd08166 MPP_Cdc1_like_1 unchar 96.4 0.0056 1.2E-07 53.7 5.2 46 86-131 42-93 (195)
85 COG4186 Predicted phosphoester 96.4 0.011 2.5E-07 49.8 6.7 68 61-132 5-87 (186)
86 cd00845 MPP_UshA_N_like Escher 96.3 0.0067 1.4E-07 54.6 5.3 66 61-131 2-82 (252)
87 PF14582 Metallophos_3: Metall 95.7 0.01 2.3E-07 53.0 3.6 73 60-132 6-103 (255)
88 cd08164 MPP_Ted1 Saccharomyces 95.4 0.026 5.7E-07 49.4 5.1 65 67-131 24-111 (193)
89 cd07410 MPP_CpdB_N Escherichia 95.3 0.023 4.9E-07 52.1 4.6 65 61-130 2-94 (277)
90 PLN02533 probable purple acid 94.8 0.038 8.2E-07 54.2 4.9 71 59-132 139-212 (427)
91 COG1407 Predicted ICC-like pho 94.7 0.089 1.9E-06 47.4 6.5 102 59-183 19-142 (235)
92 KOG2863 RNA lariat debranching 94.7 0.077 1.7E-06 50.4 6.3 73 60-132 1-89 (456)
93 cd07378 MPP_ACP5 Homo sapiens 94.7 0.069 1.5E-06 48.6 5.8 70 61-131 2-83 (277)
94 COG1311 HYS2 Archaeal DNA poly 94.4 0.47 1E-05 46.8 11.1 121 61-191 227-372 (481)
95 cd07408 MPP_SA0022_N Staphyloc 94.0 0.087 1.9E-06 47.8 5.1 65 61-130 2-81 (257)
96 cd07412 MPP_YhcR_N Bacillus su 93.4 0.099 2.2E-06 48.4 4.4 66 61-131 2-88 (288)
97 PF08321 PPP5: PPP5 TPR repeat 93.3 0.26 5.5E-06 38.3 5.8 45 9-58 51-95 (95)
98 KOG3325 Membrane coat complex 92.4 0.9 2E-05 38.2 8.1 119 62-263 3-127 (183)
99 KOG1432 Predicted DNA repair e 91.7 0.4 8.8E-06 45.4 6.0 72 61-132 55-148 (379)
100 cd07411 MPP_SoxB_N Thermus the 91.5 0.3 6.5E-06 44.5 4.9 65 61-131 2-95 (264)
101 PF06874 FBPase_2: Firmicute f 91.3 0.2 4.3E-06 50.8 3.7 60 70-134 167-227 (640)
102 COG1768 Predicted phosphohydro 91.1 0.43 9.3E-06 41.4 5.0 73 86-169 43-117 (230)
103 KOG3662 Cell division control 90.8 0.41 8.9E-06 46.5 5.2 71 60-130 49-143 (410)
104 cd00842 MPP_ASMase acid sphing 90.3 0.49 1.1E-05 43.6 5.1 61 73-133 53-124 (296)
105 KOG3339 Predicted glycosyltran 89.8 3.9 8.5E-05 35.7 9.7 87 88-179 40-143 (211)
106 cd07409 MPP_CD73_N CD73 ecto-5 89.7 0.68 1.5E-05 42.7 5.6 66 61-131 2-94 (281)
107 PRK09419 bifunctional 2',3'-cy 89.7 0.43 9.3E-06 52.6 4.9 66 60-130 661-735 (1163)
108 TIGR00282 metallophosphoestera 89.0 0.93 2E-05 41.7 5.9 67 60-131 1-71 (266)
109 cd07406 MPP_CG11883_N Drosophi 88.4 0.86 1.9E-05 41.4 5.2 56 70-130 21-82 (257)
110 PF04042 DNA_pol_E_B: DNA poly 87.7 0.84 1.8E-05 39.8 4.5 72 62-133 1-93 (209)
111 cd07405 MPP_UshA_N Escherichia 86.0 0.94 2E-05 41.9 4.1 66 61-131 2-87 (285)
112 COG0737 UshA 5'-nucleotidase/2 84.5 1.2 2.7E-05 44.6 4.4 68 59-131 26-115 (517)
113 cd07407 MPP_YHR202W_N Saccharo 84.2 1.3 2.8E-05 41.0 4.1 66 61-131 7-97 (282)
114 KOG2476 Uncharacterized conser 83.7 2.2 4.9E-05 41.9 5.6 69 59-128 5-75 (528)
115 PF14164 YqzH: YqzH-like prote 81.3 5.3 0.00011 28.6 5.3 45 10-54 1-47 (64)
116 cd08162 MPP_PhoA_N Synechococc 80.9 2.5 5.5E-05 39.7 4.7 65 61-130 2-90 (313)
117 PRK09420 cpdB bifunctional 2', 80.3 2.4 5.3E-05 43.9 4.8 68 58-130 24-121 (649)
118 TIGR01390 CycNucDiestase 2',3' 80.2 2.3 5E-05 43.9 4.6 66 60-130 3-98 (626)
119 cd07382 MPP_DR1281 Deinococcus 78.8 5.5 0.00012 36.4 6.1 66 61-131 1-70 (255)
120 PRK09419 bifunctional 2',3'-cy 78.5 2.6 5.6E-05 46.6 4.6 66 60-130 42-138 (1163)
121 KOG3947 Phosphoesterases [Gene 77.8 4 8.7E-05 37.7 4.8 93 32-132 25-127 (305)
122 PRK09558 ushA bifunctional UDP 76.2 3.4 7.5E-05 41.8 4.4 68 59-131 34-121 (551)
123 KOG1378 Purple acid phosphatas 75.4 3 6.6E-05 41.1 3.6 26 233-258 322-347 (452)
124 PTZ00235 DNA polymerase epsilo 73.6 9.7 0.00021 35.5 6.3 72 60-131 28-122 (291)
125 COG3855 Fbp Uncharacterized pr 72.0 2.1 4.5E-05 42.2 1.6 41 88-133 192-232 (648)
126 PRK11907 bifunctional 2',3'-cy 71.6 5.8 0.00013 42.2 4.8 66 60-130 116-212 (814)
127 PTZ00422 glideosome-associated 71.0 6.8 0.00015 38.1 4.8 72 60-131 27-109 (394)
128 cd07387 MPP_PolD2_C PolD2 (DNA 69.4 13 0.00028 34.0 6.1 87 88-178 44-152 (257)
129 TIGR01530 nadN NAD pyrophospha 67.7 10 0.00022 38.5 5.5 65 62-131 3-94 (550)
130 KOG0918 Selenium-binding prote 62.7 0.24 5.3E-06 47.7 -6.7 95 87-187 48-146 (476)
131 PRK09418 bifunctional 2',3'-cy 60.4 12 0.00027 39.7 4.6 67 59-130 39-141 (780)
132 COG4077 Uncharacterized protei 51.8 12 0.00026 30.7 2.3 40 67-107 101-150 (156)
133 COG0634 Hpt Hypoxanthine-guani 48.1 1.8E+02 0.004 25.1 9.3 79 29-111 8-117 (178)
134 PF02875 Mur_ligase_C: Mur lig 44.9 65 0.0014 23.8 5.4 73 56-128 8-82 (91)
135 PF06874 FBPase_2: Firmicute f 43.2 21 0.00046 36.6 3.0 25 231-255 507-535 (640)
136 PF15007 CEP44: Centrosomal sp 41.7 25 0.00055 28.8 2.7 22 67-88 1-22 (131)
137 KOG2310 DNA repair exonuclease 40.2 73 0.0016 32.4 6.1 52 60-111 14-77 (646)
138 COG4320 Uncharacterized protei 37.8 40 0.00087 32.0 3.7 60 49-116 46-109 (410)
139 PRK10773 murF UDP-N-acetylmura 36.9 1.2E+02 0.0025 29.8 7.1 67 59-126 324-392 (453)
140 PF12641 Flavodoxin_3: Flavodo 36.7 1.6E+02 0.0034 24.8 6.9 102 63-183 2-116 (160)
141 TIGR00282 metallophosphoestera 31.5 29 0.00064 31.9 1.8 39 89-131 2-41 (266)
142 cd07382 MPP_DR1281 Deinococcus 30.6 40 0.00086 30.8 2.5 37 89-126 1-37 (255)
143 PRK10853 putative reductase; P 30.1 1.9E+02 0.0041 23.0 6.1 57 8-66 35-98 (118)
144 PF09893 DUF2120: Uncharacteri 29.0 52 0.0011 27.5 2.6 23 62-85 90-112 (146)
145 TIGR03439 methyl_EasF probable 28.6 5.1E+02 0.011 24.4 11.5 97 62-160 132-233 (319)
146 COG0770 MurF UDP-N-acetylmuram 27.7 2.8E+02 0.0062 27.5 8.0 74 60-134 326-401 (451)
147 cd03035 ArsC_Yffb Arsenate Red 27.6 1.6E+02 0.0035 22.8 5.2 23 43-67 75-97 (105)
148 PF09949 DUF2183: Uncharacteri 26.9 1.7E+02 0.0036 22.8 5.1 36 83-124 60-95 (100)
149 PF13258 DUF4049: Domain of un 26.9 2.9E+02 0.0063 25.3 7.1 57 118-181 127-186 (318)
150 COG3207 DIT1 Pyoverdine/dityro 25.2 1.3E+02 0.0028 28.0 4.6 41 56-96 102-156 (330)
151 PRK11534 DNA-binding transcrip 24.4 4.6E+02 0.01 22.6 8.6 73 3-79 1-82 (224)
152 PF05046 Img2: Mitochondrial l 22.3 2.4E+02 0.0051 21.2 5.0 16 62-77 28-43 (87)
153 COG3357 Predicted transcriptio 21.3 1.1E+02 0.0025 23.5 3.0 41 233-273 41-81 (97)
154 COG1692 Calcineurin-like phosp 21.1 1.1E+02 0.0024 28.0 3.4 12 232-243 212-223 (266)
155 PLN02965 Probable pheophorbida 20.8 3.2E+02 0.007 23.8 6.5 21 233-253 59-81 (255)
156 PF06861 BALF1: BALF1 protein; 20.7 1.8E+02 0.0039 25.1 4.4 83 32-132 52-134 (182)
157 TIGR01143 murF UDP-N-acetylmur 20.3 4.3E+02 0.0093 25.4 7.7 77 42-128 312-406 (417)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-73 Score=498.93 Aligned_cols=252 Identities=48% Similarity=0.964 Sum_probs=241.9
Q ss_pred HHHHHHHHHHcCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEecCCCCHHHHHHHHHhCCCCCCCceeec
Q 022466 14 VLDDIIRRLLEGRGGKQVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLFL 93 (297)
Q Consensus 14 ~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~vfL 93 (297)
++++.|+++.+. ..++++++..||.+++++|.+|||++.++.|++|+|||||+++||..+|+..|-+++++|+||
T Consensus 2 dldr~ie~L~~~-----~li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~YLFL 76 (303)
T KOG0372|consen 2 DLDRQIEQLRRC-----ELIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNYLFL 76 (303)
T ss_pred cHHHHHHHHHhc-----CCCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCceEee
Confidence 468889998754 467899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhhhcChHHHHHHHH-HHHHHHHHHHhhcCCeEEEEcCcE
Q 022466 94 GDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFN-VRLWKIFTDCFNCLPVAALINEKI 172 (297)
Q Consensus 94 GD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~~~~LPl~a~i~~~i 172 (297)
|||||||.+|+|++.+|+.||++||+++++||||||++.+++.|||++||.+||+ ..+|+.+.+.|+.||++|+|++++
T Consensus 77 GDyVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~ki 156 (303)
T KOG0372|consen 77 GDYVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDGKI 156 (303)
T ss_pred cchhccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecCcE
Confidence 9999999999999999999999999999999999999999999999999999995 789999999999999999999999
Q ss_pred EEecCCCCCCCCChHHhhccCCCCCCCCCCcccccccCCCCCCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEccc
Q 022466 173 LCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQ 252 (297)
Q Consensus 173 l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~ 252 (297)
||||||+||.++++|||+.+.|..++|..+.++|+|||||.+. ++|..+|||+|+.||.+++++|++.||+++|+|+||
T Consensus 157 fCVHGGlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~-~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~RaHQ 235 (303)
T KOG0372|consen 157 FCVHGGLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEG-PGWGLSPRGAGYLFGEDVVESFLEANGLSLICRAHQ 235 (303)
T ss_pred EEEcCCCCcchhhHHHHHHhhccccCCCCCcchheeccCcccC-CCcccCCCCccccccHHHHHHHHHhCChHHHHHHHH
Confidence 9999999999999999999999999999999999999999964 799999999999999999999999999999999999
Q ss_pred ccccchhcc-cc----ccccCCcc
Q 022466 253 VRHFHFEHA-DY----SFTISRSC 271 (297)
Q Consensus 253 ~~~~G~~~~-~~----~~s~~~~c 271 (297)
.+.+||++. +. +.||||||
T Consensus 236 Lv~eGyk~~F~~~v~TVWSAPNYC 259 (303)
T KOG0372|consen 236 LVMEGYKWHFDEKVVTVWSAPNYC 259 (303)
T ss_pred HHHhhHHHhcCCceEEEecCCchh
Confidence 999999984 44 56999998
No 2
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=8.9e-67 Score=485.16 Aligned_cols=260 Identities=69% Similarity=1.252 Sum_probs=247.8
Q ss_pred HHHHHHHHHHcCC---CCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEecCCCCHHHHHHHHHhCCCCCCCce
Q 022466 14 VLDDIIRRLLEGR---GGKQVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANY 90 (297)
Q Consensus 14 ~~~~~i~~~~~~~---~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~ 90 (297)
+++++|+++++.+ ++....|+++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..++++.++|
T Consensus 10 ~~~~~i~~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~~~y 89 (320)
T PTZ00480 10 DVDNIIERLLSVRGSKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPESNY 89 (320)
T ss_pred CHHHHHHHHHhccccCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCcceE
Confidence 3888999998763 3455679999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhhhcChHHHHHHHHHHHHHHHHHHhhcCCeEEEEcC
Q 022466 91 LFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINE 170 (297)
Q Consensus 91 vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~LPl~a~i~~ 170 (297)
||||||||||++++|++.+++++|+.+|.++++||||||...++..|||..|+..+|+..+|..+.++|+.||+||+|++
T Consensus 90 lfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~~~l~~~~~~~F~~LPlaAiI~~ 169 (320)
T PTZ00480 90 LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYTIKLWKTFTDCFNCLPVAALIDE 169 (320)
T ss_pred EEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcCHHHHHHHHHHHHhccHhheecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCCCCChHHhhccCCCCCCCCCCcccccccCCCCCCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEc
Q 022466 171 KILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRG 250 (297)
Q Consensus 171 ~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrg 250 (297)
++|||||||+|.+.++++|+.++||.+.++.++++|+|||||.....+|.+|+||.|+.||++++++||++||+++||||
T Consensus 170 ~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~IiR~ 249 (320)
T PTZ00480 170 KILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLICRA 249 (320)
T ss_pred cEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcEEEEc
Confidence 99999999999999999999999999999999999999999998778999999999999999999999999999999999
Q ss_pred ccccccchhcccc-----ccccCCccee
Q 022466 251 HQVRHFHFEHADY-----SFTISRSCKV 273 (297)
Q Consensus 251 H~~~~~G~~~~~~-----~~s~~~~c~v 273 (297)
||++++||+++.+ +||+++||+.
T Consensus 250 Hq~v~~G~~~~~~~~~iTvFSa~~Y~~~ 277 (320)
T PTZ00480 250 HQVVEDGYEFFSKRQLVTLFSAPNYCGE 277 (320)
T ss_pred CccccCceEEeCCCcEEEEeCCcccCCC
Confidence 9999999998654 6899999875
No 3
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=2.8e-67 Score=490.10 Aligned_cols=274 Identities=62% Similarity=1.089 Sum_probs=255.2
Q ss_pred CChHHHHHHHHHHHcCC---CC--ccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEecCCCCHHHHHHHHHhCC-
Q 022466 10 MDKVVLDDIIRRLLEGR---GG--KQVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGG- 83 (297)
Q Consensus 10 ~~~~~~~~~i~~~~~~~---~~--~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~vvGDIHG~~~~L~~il~~~~- 83 (297)
+....++++|.+++... .. .+..++++++.+||..+.++|..+|+++++++||.|+||||||+.||.++|+..|
T Consensus 4 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~ 83 (331)
T KOG0374|consen 4 MASLDLDELIRKLLSVGNKKTEKKRQVPLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGS 83 (331)
T ss_pred cchhhHHHHHHHHhhccccCCCcccceeccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCC
Confidence 44567788888887762 22 2456999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhhhcChHHHHHHHH-HHHHHHHHHHhhcC
Q 022466 84 YPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFN-VRLWKIFTDCFNCL 162 (297)
Q Consensus 84 ~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~~~~L 162 (297)
+|++++|||||||||||++|+|++.+|+++|++||++++++|||||.+.++..|||++||.++|+ ..+|+.|++.|..|
T Consensus 84 ~pp~~~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~m 163 (331)
T KOG0374|consen 84 FPPDQNYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCL 163 (331)
T ss_pred CCCcccEEEecccccCCccceEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999998 69999999999999
Q ss_pred CeEEEEcCcEEEecCCCCCCCCChHHhhccCCCCCCCCCCcccccccCCCCCCCCCCccCCCCCccccCHHHHHHHHHHC
Q 022466 163 PVAALINEKILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKN 242 (297)
Q Consensus 163 Pl~a~i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~ 242 (297)
|++|+|+++++|+|||++|.+.++++|+.|.||.+.++.++++|++||||.....+|.+|.||.++.||++++++||+++
T Consensus 164 p~~a~i~~kI~CmhGGlsp~l~~~~~i~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~ 243 (331)
T KOG0374|consen 164 PLAALIDGKILCMHGGLSPHLKSLDQIRAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKL 243 (331)
T ss_pred chhheecceEEEecCCCChhhcChHHHhhccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999988899999999999999999999999999
Q ss_pred CCcEEEEcccccccchhcccc-----ccccCCccee-------eeecceeeEe
Q 022466 243 DLDLICRGHQVRHFHFEHADY-----SFTISRSCKV-------HAIEDILSFR 283 (297)
Q Consensus 243 g~~~iIrgH~~~~~G~~~~~~-----~~s~~~~c~v-------~~~~~~~~~~ 283 (297)
++++||||||++++||++|++ .|||++||+. +.+++.+...
T Consensus 244 ~ldlivRaHqvv~dGyeffa~r~lvTIFSAP~Ycg~~~n~gavm~Vd~~l~~s 296 (331)
T KOG0374|consen 244 DLDLIVRAHQVVEDGYEFFAGRKLVTIFSAPNYCGEFDNAGAVMRVDKNLKCS 296 (331)
T ss_pred CcceEEEcCccccccceEecCceEEEEecCchhccccCCceEEEEECCCCeEE
Confidence 999999999999999999987 4899999865 4455544433
No 4
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=3e-67 Score=453.15 Aligned_cols=269 Identities=45% Similarity=0.878 Sum_probs=249.8
Q ss_pred HHHHHHHHHHHcCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEecCCCCHHHHHHHHHhCCCCCCCceee
Q 022466 13 VVLDDIIRRLLEGRGGKQVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLF 92 (297)
Q Consensus 13 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~vf 92 (297)
-+++++|+....+ ..|+++++..||+-++++|..|.|+.+++.|+.|+|||||+++||.++|+..|..|.++|||
T Consensus 4 ~d~d~wi~~vk~c-----kyLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~tnYiF 78 (306)
T KOG0373|consen 4 MDLDQWIETVKKC-----KYLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPDTNYIF 78 (306)
T ss_pred CCHHHHHHHHHHc-----CCCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCCcceEE
Confidence 3678999999655 48899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhhhcChHHHHHHHH-HHHHHHHHHHhhcCCeEEEEcCc
Q 022466 93 LGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFN-VRLWKIFTDCFNCLPVAALINEK 171 (297)
Q Consensus 93 LGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~~~~LPl~a~i~~~ 171 (297)
+|||||||.+|+|++.+|+.||.+||.++.+||||||++.+.+.|||++||+.+|+ ...|+.+.+.|+.|+++|+|+++
T Consensus 79 mGDfVDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaAiID~~ 158 (306)
T KOG0373|consen 79 MGDFVDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAAIIDEK 158 (306)
T ss_pred eccccccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHHHhcCc
Confidence 99999999999999999999999999999999999999999999999999999995 78999999999999999999999
Q ss_pred EEEecCCCCCCCCChHHhhccCCCCCCCCCCcccccccCCCCCCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcc
Q 022466 172 ILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGH 251 (297)
Q Consensus 172 il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH 251 (297)
++|||||+||++.++|||+-+.|..++|..+.+||++||||+. .+.|.-+|||+|+.||.+++++|...|++++|+|+|
T Consensus 159 vLCVHGGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPed-ve~W~vSpRGAGwlFGskVt~eF~~iN~L~LicRaH 237 (306)
T KOG0373|consen 159 VLCVHGGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPED-VETWAVSPRGAGWLFGSKVTTEFNHINNLNLICRAH 237 (306)
T ss_pred EEEEcCCCCccceeHHHHHhHHhhccCCCCCCccceeccChhh-hhhheeCCCCcceeechhhhHHHHhccchHHHHhHH
Confidence 9999999999999999999999999999999999999999985 799999999999999999999999999999999999
Q ss_pred cccccchhc-ccc-----ccccCCcc-------eeeeecceeeEeeCce
Q 022466 252 QVRHFHFEH-ADY-----SFTISRSC-------KVHAIEDILSFRFPFV 287 (297)
Q Consensus 252 ~~~~~G~~~-~~~-----~~s~~~~c-------~v~~~~~~~~~~~~~~ 287 (297)
|.+++||++ |++ +.|++||| .|+.+++..+-++-++
T Consensus 238 QLV~EG~KymF~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F 286 (306)
T KOG0373|consen 238 QLVQEGFKYMFDEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIF 286 (306)
T ss_pred HHHHhhHHhccCCCCEEEEecCCchhhhccCeeeEEEecccCCccceee
Confidence 999999997 444 57999997 3444554444343333
No 5
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=1.6e-65 Score=477.25 Aligned_cols=267 Identities=34% Similarity=0.625 Sum_probs=237.2
Q ss_pred CChHHHHHHHHHHHcCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecC----cEEEEecCCCCHHHHHHHHHhCCCC
Q 022466 10 MDKVVLDDIIRRLLEGRGGKQVQLSESEIRQLCVNARQIFLSQPNLVEVEA----PIRICGDVHGQYQDLLRLFEHGGYP 85 (297)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~----~i~vvGDIHG~~~~L~~il~~~~~~ 85 (297)
.+.+.++++|+++.+. ..|+++++.+||++|+++|++||++++++. |++||||||||+++|.++|+..|++
T Consensus 2 ~~~~~~~~~i~~~~~~-----~~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~~ 76 (321)
T cd07420 2 LTKDHIDALIEAFKEK-----QLLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLP 76 (321)
T ss_pred CCHHHHHHHHHHHHcc-----CCCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCCC
Confidence 3567899999999753 268899999999999999999999999976 8999999999999999999999998
Q ss_pred C-CCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhhhcChHHHHHHHH---HHHHHHHHHHhhc
Q 022466 86 P-TANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFN---VRLWKIFTDCFNC 161 (297)
Q Consensus 86 ~-~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~---~~~~~~~~~~~~~ 161 (297)
+ .++|||||||||||++|+||+.+|++||+.+|+++++||||||.+.++..|||.+||..+|+ ..+|+.+.++|+.
T Consensus 77 ~~~~~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F~~ 156 (321)
T cd07420 77 SPENPYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVFSW 156 (321)
T ss_pred CccceEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHHHh
Confidence 5 46799999999999999999999999999999999999999999999999999999999996 7899999999999
Q ss_pred CCeEEEEcCcEEEecCCCCCCCCChHHhhccCCCCC-----CCC----------------------CCcccccccCCCCC
Q 022466 162 LPVAALINEKILCMHGGLSPELENLDQIRNISRPTD-----IPD----------------------NGLLCDLLWSDPDA 214 (297)
Q Consensus 162 LPl~a~i~~~il~vHgGi~p~~~~l~~i~~i~r~~~-----~~~----------------------~~~~~dllWsdp~~ 214 (297)
||+||++++++|||||||+| ..++++|+.++|+.. +|. .+++.|+|||||..
T Consensus 157 LPlaaii~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~~ 235 (321)
T cd07420 157 LPLATIIDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSDPKA 235 (321)
T ss_pred CCceEEEcCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecCCcc
Confidence 99999999999999999997 578999999887421 111 14678999999996
Q ss_pred CCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcccccccchhcccc-----ccccCCccee-eeecceeeE
Q 022466 215 NIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVRHFHFEHADY-----SFTISRSCKV-HAIEDILSF 282 (297)
Q Consensus 215 ~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~~~~~-----~~s~~~~c~v-~~~~~~~~~ 282 (297)
....|.+++||.|+.||++++++||++|++++||||||++++||+++.+ +||+++||+. .+.++.+.+
T Consensus 236 ~~~~~~~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~~~~~iTvFSa~nY~~~~~N~gavl~i 309 (321)
T cd07420 236 QKGCKPNTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRGAYIKL 309 (321)
T ss_pred CCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEecCCeEEEEecCCccCCCCCccEEEEEE
Confidence 5455777899999999999999999999999999999999999998654 6899999975 355554444
No 6
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=8.4e-66 Score=475.63 Aligned_cols=266 Identities=68% Similarity=1.254 Sum_probs=248.8
Q ss_pred HHHHHHHHHcCC---CCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEecCCCCHHHHHHHHHhCCCCCCCcee
Q 022466 15 LDDIIRRLLEGR---GGKQVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANYL 91 (297)
Q Consensus 15 ~~~~i~~~~~~~---~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~v 91 (297)
++++|+++++.+ .+....|+++++.+||++|+++|++||++++++.+++||||||||+.+|.++|+..++++.++||
T Consensus 2 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~l 81 (293)
T cd07414 2 IDSIIERLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 81 (293)
T ss_pred HHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceEE
Confidence 567888887753 35567899999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhhhcChHHHHHHHHHHHHHHHHHHhhcCCeEEEEcCc
Q 022466 92 FLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINEK 171 (297)
Q Consensus 92 fLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~LPl~a~i~~~ 171 (297)
|||||||||++++|++.+++++|+.+|.++++||||||.+.++..|||.+|+..+|+..+|..+.++|++||++|+++++
T Consensus 82 fLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaa~i~~~ 161 (293)
T cd07414 82 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIIDEK 161 (293)
T ss_pred EEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhhHHHHHHHHHHHHHhHHHHhhCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCCCChHHhhccCCCCCCCCCCcccccccCCCCCCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcc
Q 022466 172 ILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGH 251 (297)
Q Consensus 172 il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH 251 (297)
++|||||++|.+.++++|+.++||.+.++.++++|+|||||.....+|.+|+||.|+.||++++++||++||+++|||||
T Consensus 162 i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~H 241 (293)
T cd07414 162 IFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICRAH 241 (293)
T ss_pred EEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEECC
Confidence 99999999999999999999999999999999999999999987889999999999999999999999999999999999
Q ss_pred cccccchhcccc-----ccccCCccee-eeeccee
Q 022466 252 QVRHFHFEHADY-----SFTISRSCKV-HAIEDIL 280 (297)
Q Consensus 252 ~~~~~G~~~~~~-----~~s~~~~c~v-~~~~~~~ 280 (297)
|++++||+++.+ +||+++||+. .+.++.+
T Consensus 242 e~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l 276 (293)
T cd07414 242 QVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMM 276 (293)
T ss_pred ccccCeEEEeCCCcEEEEecCCcccCCCCceEEEE
Confidence 999999998654 5899999973 3333333
No 7
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=1.6e-65 Score=473.44 Aligned_cols=272 Identities=51% Similarity=0.994 Sum_probs=251.5
Q ss_pred HHHHHHHHHHcCC---CCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEecCCCCHHHHHHHHHhCCCCCCCce
Q 022466 14 VLDDIIRRLLEGR---GGKQVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANY 90 (297)
Q Consensus 14 ~~~~~i~~~~~~~---~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~ 90 (297)
.++++|.++++.. .+....++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..++++.++|
T Consensus 3 ~~~~~i~~~~~~~~~~~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~~~ 82 (294)
T PTZ00244 3 LVQTLIEKMLTVKGNRTQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYSNY 82 (294)
T ss_pred hHHHHHHHHHhcccCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCcccE
Confidence 4678888888763 2455678999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhhhcChHHHHHHHHHHHHHHHHHHhhcCCeEEEEcC
Q 022466 91 LFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINE 170 (297)
Q Consensus 91 vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~LPl~a~i~~ 170 (297)
||||||||||++|.|++.+++++|+.+|.+++++|||||...++..|||.+++..+|+..+|..+.++|+.||++|++++
T Consensus 83 lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaaii~~ 162 (294)
T PTZ00244 83 LFLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYNIKLFKAFTDVFNTMPVCCVISE 162 (294)
T ss_pred EEeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhhHHHHHHHHHHHHhCchheEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCCCCChHHhhccCCCCCCCCCCcccccccCCCCCCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEc
Q 022466 171 KILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRG 250 (297)
Q Consensus 171 ~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrg 250 (297)
+++|||||++|.+.++++++.++||.+.++.++++|++||||.....+|.+++||.|+.||++++++||++||+++||||
T Consensus 163 ~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 242 (294)
T PTZ00244 163 KIICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIVRA 242 (294)
T ss_pred eeEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEEEEc
Confidence 99999999999999999999999999999999999999999997778999999999999999999999999999999999
Q ss_pred ccccccchhcccc-----ccccCCccee-------eeecceeeEeeC
Q 022466 251 HQVRHFHFEHADY-----SFTISRSCKV-------HAIEDILSFRFP 285 (297)
Q Consensus 251 H~~~~~G~~~~~~-----~~s~~~~c~v-------~~~~~~~~~~~~ 285 (297)
||++++||+++.+ +||+++||+. ..+++.+.++|.
T Consensus 243 Hq~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~f~ 289 (294)
T PTZ00244 243 HQVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVMNIDDKLQCSFL 289 (294)
T ss_pred CccccCceEEcCCCeEEEEeCCccccCCCCceEEEEEECCCCcEeEE
Confidence 9999999998654 6899999853 445554444443
No 8
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=1.6e-64 Score=465.42 Aligned_cols=253 Identities=51% Similarity=0.967 Sum_probs=239.9
Q ss_pred HHHHHHHHHcCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEecCCCCHHHHHHHHHhCCCCCCCceeecc
Q 022466 15 LDDIIRRLLEGRGGKQVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLG 94 (297)
Q Consensus 15 ~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLG 94 (297)
++++|+++++. ..++++++.+||++|++++++||++++++.|++||||||||+.+|.++|+..++++.++|||||
T Consensus 2 ~~~~~~~~~~~-----~~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLG 76 (285)
T cd07415 2 LDKWIEQLKKC-----ELLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLG 76 (285)
T ss_pred HHHHHHHHHcc-----CCCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEe
Confidence 57788888753 3689999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhhhcChHHHHHHHH-HHHHHHHHHHhhcCCeEEEEcCcEE
Q 022466 95 DYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFN-VRLWKIFTDCFNCLPVAALINEKIL 173 (297)
Q Consensus 95 D~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~~~~LPl~a~i~~~il 173 (297)
||||||++|+|++.+++++|+.+|.++++||||||...++..|||.+|+..+|+ ..+|..+.++|+.||++|+++++++
T Consensus 77 DyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~i~ 156 (285)
T cd07415 77 DYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDNQIF 156 (285)
T ss_pred EECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCCeEE
Confidence 999999999999999999999999999999999999999999999999999997 4899999999999999999999999
Q ss_pred EecCCCCCCCCChHHhhccCCCCCCCCCCcccccccCCCCCCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcccc
Q 022466 174 CMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQV 253 (297)
Q Consensus 174 ~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~ 253 (297)
||||||+|.+.++++|++++||.+.+..+.++|+|||||... .+|.+|+||.|+.||++++++||++||+++||||||+
T Consensus 157 cvHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~ 235 (285)
T cd07415 157 CVHGGLSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDI-EGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRAHQL 235 (285)
T ss_pred EEcCCCCCCcccHHHhhcccCCCCCCCCCCccceEecCCCcc-CCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEcCcc
Confidence 999999999999999999999999999999999999999964 8999999999999999999999999999999999999
Q ss_pred cccchhcccc-----ccccCCccee
Q 022466 254 RHFHFEHADY-----SFTISRSCKV 273 (297)
Q Consensus 254 ~~~G~~~~~~-----~~s~~~~c~v 273 (297)
+++||++..+ +||+++||+.
T Consensus 236 ~~~G~~~~~~~~~~TvfSa~~y~~~ 260 (285)
T cd07415 236 VMEGYQWMFDDKLVTVWSAPNYCYR 260 (285)
T ss_pred ccceEEEecCCcEEEEecCCcccCC
Confidence 9999998654 6899999854
No 9
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=3.7e-64 Score=465.83 Aligned_cols=253 Identities=46% Similarity=0.924 Sum_probs=238.7
Q ss_pred HHHHHHHHHcCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEecCCCCHHHHHHHHHhCCCCCCCceeecc
Q 022466 15 LDDIIRRLLEGRGGKQVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLG 94 (297)
Q Consensus 15 ~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLG 94 (297)
++++|+++.+. ..++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..+.++.++|+|||
T Consensus 3 ~~~~~~~~~~~-----~~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLG 77 (303)
T PTZ00239 3 IDRHIATLLNG-----GCLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANYIFIG 77 (303)
T ss_pred HHHHHHHHHcc-----CCCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEee
Confidence 67888888753 2689999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhhhcChHHHHHHHH-HHHHHHHHHHhhcCCeEEEEcCcEE
Q 022466 95 DYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFN-VRLWKIFTDCFNCLPVAALINEKIL 173 (297)
Q Consensus 95 D~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~~~~LPl~a~i~~~il 173 (297)
||||||++++|++.+++++|+.+|.++++||||||.+.++..|||.+|+..+|+ ..+|+.+.++|+.||++|+++++++
T Consensus 78 DyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~~i~ 157 (303)
T PTZ00239 78 DFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEGQIL 157 (303)
T ss_pred eEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcCeEE
Confidence 999999999999999999999999999999999999999999999999999996 4789999999999999999999999
Q ss_pred EecCCCCCCCCChHHhhccCCCCCCCCCCcccccccCCCCCCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcccc
Q 022466 174 CMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQV 253 (297)
Q Consensus 174 ~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~ 253 (297)
|||||++|.++++++|+.++||.+.|..+.++|+|||||.. ..+|.+|+||.|+.||++++++||++||+++||||||+
T Consensus 158 cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~-~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~ 236 (303)
T PTZ00239 158 CVHGGLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEE-VEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICRAHQL 236 (303)
T ss_pred EEcCccCcccccHhhhccccCCCCCCCCCCceeeEecCccc-cCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChh
Confidence 99999999999999999999999999999999999999984 57899999999999999999999999999999999999
Q ss_pred cccchhcc-cc-----ccccCCccee
Q 022466 254 RHFHFEHA-DY-----SFTISRSCKV 273 (297)
Q Consensus 254 ~~~G~~~~-~~-----~~s~~~~c~v 273 (297)
+++||+++ .+ +||+++||+.
T Consensus 237 ~~~G~~~~~~~~~~iTvfSa~~Y~~~ 262 (303)
T PTZ00239 237 VMEGYKYWFPDQNLVTVWSAPNYCYR 262 (303)
T ss_pred hccceEEEeCCCeEEEEECCCcccCC
Confidence 99999974 33 5799999853
No 10
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=3.7e-63 Score=460.61 Aligned_cols=261 Identities=40% Similarity=0.763 Sum_probs=239.1
Q ss_pred HHHHHHHHHcCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEecCCCCHHHHHHHHHhCCCCCCCceeecc
Q 022466 15 LDDIIRRLLEGRGGKQVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLG 94 (297)
Q Consensus 15 ~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLG 94 (297)
++-+++.+... ..++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..+.++.++|||||
T Consensus 3 ~~~~~~~~~~~-----~~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLG 77 (305)
T cd07416 3 IDVLKAHFMRE-----GRLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLG 77 (305)
T ss_pred HHHHHHHHHcC-----CCCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEEC
Confidence 45566666532 3588999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhhhcChHHHHHHHHHHHHHHHHHHhhcCCeEEEEcCcEEE
Q 022466 95 DYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINEKILC 174 (297)
Q Consensus 95 D~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~LPl~a~i~~~il~ 174 (297)
||||||++|+||+.+|+++|+.+|.++++||||||.+.++..|||.+|+..+|+..+|..+.++|++||++++++++++|
T Consensus 78 DyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~~~l~~~~~~~f~~LPlaaii~~~i~~ 157 (305)
T cd07416 78 DYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMEAFDCLPLAALMNQQFLC 157 (305)
T ss_pred CccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhccHHHHHHHHHHHhhccceeEEcCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCChHHhhccCCCCCCCCCCcccccccCCCCCCCC------CCccC-CCCCccccCHHHHHHHHHHCCCcEE
Q 022466 175 MHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIE------GWADS-DRGVSCTFGSDVVADFLDKNDLDLI 247 (297)
Q Consensus 175 vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~------~~~~~-~rg~~~~fg~~~~~~fl~~~g~~~i 247 (297)
||||++|.+.++++|++++||.+.+..++++|+|||||..... +|.+| +||.|+.||++++++||++||+++|
T Consensus 158 vHGGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l~~i 237 (305)
T cd07416 158 VHGGLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNLLSI 237 (305)
T ss_pred EcCCCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCCeEE
Confidence 9999999999999999999999999899999999999975432 47776 8999999999999999999999999
Q ss_pred EEcccccccchhccc--------c---ccccCCcceee-eeccee
Q 022466 248 CRGHQVRHFHFEHAD--------Y---SFTISRSCKVH-AIEDIL 280 (297)
Q Consensus 248 IrgH~~~~~G~~~~~--------~---~~s~~~~c~v~-~~~~~~ 280 (297)
|||||++++||+++. . +||+++||+.. +.++++
T Consensus 238 iR~He~~~~G~~~~~~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l 282 (305)
T cd07416 238 IRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVL 282 (305)
T ss_pred EEeccccccceEEecCCCcCCCCcEEEEeCCccccCCCCceEEEE
Confidence 999999999999853 2 47999999873 434443
No 11
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=2e-63 Score=455.87 Aligned_cols=249 Identities=53% Similarity=0.960 Sum_probs=235.5
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEecCCCCHHHHHHHHHhCCCCCCCceeeccCccCCCCCcHHHHHHHHH
Q 022466 33 LSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLA 112 (297)
Q Consensus 33 ~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~ 112 (297)
++++++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..+.++.+++||||||||||++|+|++.++++
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhCCCcEEEecCCchhhhhHhhhcChHHHHHHHHHHHHHHHHHHhhcCCeEEEEcCcEEEecCCCCCCCCChHHhhcc
Q 022466 113 YKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPELENLDQIRNI 192 (297)
Q Consensus 113 lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~LPl~a~i~~~il~vHgGi~p~~~~l~~i~~i 192 (297)
+|+.+|.++++||||||.+.++..|||.+|+..+|+.++|+.+.++|+.||++|+++++++|||||++|.+.++++|+++
T Consensus 81 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~i 160 (271)
T smart00156 81 LKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYGEEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRKL 160 (271)
T ss_pred HHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcCHHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccccccCCCCCCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcccccccchhcccc-----cccc
Q 022466 193 SRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVRHFHFEHADY-----SFTI 267 (297)
Q Consensus 193 ~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~~~~~-----~~s~ 267 (297)
+||.+.++.+.++|++||||.....+|.+|+||.++.||++++++||++||+++||||||++++||+++.+ +||+
T Consensus 161 ~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa 240 (271)
T smart00156 161 KRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFHDRKLVTIFSA 240 (271)
T ss_pred cCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEecCCcEEEEECC
Confidence 99999999999999999999877789999999999999999999999999999999999999999998654 6899
Q ss_pred CCccee-eeecceee
Q 022466 268 SRSCKV-HAIEDILS 281 (297)
Q Consensus 268 ~~~c~v-~~~~~~~~ 281 (297)
++||+. .+.++.+.
T Consensus 241 ~~y~~~~~n~~a~~~ 255 (271)
T smart00156 241 PNYCGRFGNKAAVLK 255 (271)
T ss_pred cccccCCCceEEEEE
Confidence 999975 44444433
No 12
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=8.4e-63 Score=459.49 Aligned_cols=268 Identities=40% Similarity=0.774 Sum_probs=245.7
Q ss_pred cCChHHHHHHHHHHHcCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCc----EEEEecCCCCHHHHHHHHHhCCC
Q 022466 9 MMDKVVLDDIIRRLLEGRGGKQVQLSESEIRQLCVNARQIFLSQPNLVEVEAP----IRICGDVHGQYQDLLRLFEHGGY 84 (297)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~----i~vvGDIHG~~~~L~~il~~~~~ 84 (297)
.++.+.++++++++... ..|+++++.+||++|+++|++||++++++.| ++||||||||+.+|.++|+..++
T Consensus 10 ~i~~~~~~~~~~~~~~~-----~~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~g~ 84 (316)
T cd07417 10 KVTLEFVKEMIEWFKDQ-----KKLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNGL 84 (316)
T ss_pred CCCHHHHHHHHHHHHcc-----CCCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhcCC
Confidence 37888999999999753 2688999999999999999999999999865 99999999999999999999998
Q ss_pred CCC-CceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhhhcChHHHHHHHHHHHHHHHHHHhhcCC
Q 022466 85 PPT-ANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLP 163 (297)
Q Consensus 85 ~~~-~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~LP 163 (297)
++. ++|||||||||||++|+||+.+++++|+.+|.++++||||||.+.++..|||..|+..+|+..+|..+.++|++||
T Consensus 85 ~~~~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~~~l~~~~~~~f~~LP 164 (316)
T cd07417 85 PSETNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYNEQMFDLFSEVFNWLP 164 (316)
T ss_pred CCccCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhcccHHHHHHHHHHHHhch
Confidence 765 4699999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCcEEEecCCC-CCCCCChHHhhccCCCCCCCCCCcccccccCCCCCCCCCCccCCCCCccccCHHHHHHHHHHC
Q 022466 164 VAALINEKILCMHGGL-SPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKN 242 (297)
Q Consensus 164 l~a~i~~~il~vHgGi-~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~ 242 (297)
++++++++++|||||+ +|...+++++++++||.+.++.++++|+|||||.+. .+|.+|+||.|+.||++++++||++|
T Consensus 165 laaii~~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~~~~s~Rg~g~~fg~~~~~~Fl~~n 243 (316)
T cd07417 165 LAHLINGKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQ-PGRSPSKRGVGCQFGPDVTKRFLEEN 243 (316)
T ss_pred HhheeCCeEEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCC-CCCCccCCCCceEeCHHHHHHHHHHc
Confidence 9999999999999999 567889999999999998888999999999999864 68999999999999999999999999
Q ss_pred CCcEEEEcccccccchhcccc-----ccccCCccee-eeecceeeE
Q 022466 243 DLDLICRGHQVRHFHFEHADY-----SFTISRSCKV-HAIEDILSF 282 (297)
Q Consensus 243 g~~~iIrgH~~~~~G~~~~~~-----~~s~~~~c~v-~~~~~~~~~ 282 (297)
|+++||||||++++||+++.+ +||+++||+. .+.++.+.+
T Consensus 244 ~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N~ga~~~i 289 (316)
T cd07417 244 NLEYIIRSHEVKDEGYEVEHDGKCITVFSAPNYCDQMGNKGAFIRI 289 (316)
T ss_pred CCcEEEECCcccceeEEEecCCeEEEEeCCccccCCCCcceEEEEE
Confidence 999999999999999998654 6899999964 344444444
No 13
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=4.5e-60 Score=447.24 Aligned_cols=276 Identities=32% Similarity=0.587 Sum_probs=242.5
Q ss_pred ccCChHHHHHHHHHHHcCC----C-CccccCCHHHHHHHHHHHHHHHhhCCCeeeec----CcEEEEecCCCCHHHHHHH
Q 022466 8 GMMDKVVLDDIIRRLLEGR----G-GKQVQLSESEIRQLCVNARQIFLSQPNLVEVE----APIRICGDVHGQYQDLLRL 78 (297)
Q Consensus 8 ~~~~~~~~~~~i~~~~~~~----~-~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~----~~i~vvGDIHG~~~~L~~i 78 (297)
+.++.+.++++|.++.+.. + .....++++++.+||++|+++|++||++++++ .|++||||||||+.+|.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~l 84 (377)
T cd07418 5 GALTNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFL 84 (377)
T ss_pred CccCHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHH
Confidence 4478899999999996651 1 12345789999999999999999999999998 7999999999999999999
Q ss_pred HHhCCCCCCC-ceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhhhcChHHHHHHHH---HHHHHH
Q 022466 79 FEHGGYPPTA-NYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFN---VRLWKI 154 (297)
Q Consensus 79 l~~~~~~~~~-~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~---~~~~~~ 154 (297)
|+..++++.+ .|||||||||||++|+||+.+|+++|+.+|.++++||||||.+.++..|||.+|+..+|+ ..+|+.
T Consensus 85 l~~~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~ 164 (377)
T cd07418 85 LEDAGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRK 164 (377)
T ss_pred HHHhCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHH
Confidence 9999998754 599999999999999999999999999999999999999999999999999999999995 479999
Q ss_pred HHHHhhcCCeEEEEcCcEEEecCCC---------------------------CCCCCChHHhhccCCCC-CCCCCC---c
Q 022466 155 FTDCFNCLPVAALINEKILCMHGGL---------------------------SPELENLDQIRNISRPT-DIPDNG---L 203 (297)
Q Consensus 155 ~~~~~~~LPl~a~i~~~il~vHgGi---------------------------~p~~~~l~~i~~i~r~~-~~~~~~---~ 203 (297)
+.++|++||++++++++++|||||| +|.++++++|+.++||. +++..+ +
T Consensus 165 ~~~~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i 244 (377)
T cd07418 165 CLGCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLI 244 (377)
T ss_pred HHHHHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCcccc
Confidence 9999999999999999999999999 44567999999999974 555544 4
Q ss_pred ccccccCCCCCCCCCCccC-CCCCccccCHHHHHHHHHHCCCcEEEEcccc------------cccchhccc----c---
Q 022466 204 LCDLLWSDPDANIEGWADS-DRGVSCTFGSDVVADFLDKNDLDLICRGHQV------------RHFHFEHAD----Y--- 263 (297)
Q Consensus 204 ~~dllWsdp~~~~~~~~~~-~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~------------~~~G~~~~~----~--- 263 (297)
++|+|||||... .+|.+| +||.|+.||++++++||++|++++||||||+ +++||++.. +
T Consensus 245 ~~dlLWSDP~~~-~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~~~~li 323 (377)
T cd07418 245 PGDVLWSDPSLT-PGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVESGKLI 323 (377)
T ss_pred ceeeEeeCCccC-CCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccCCCCcEE
Confidence 789999999864 677776 7999999999999999999999999999996 679999854 2
Q ss_pred -ccccCCccee-------eeecceeeEee
Q 022466 264 -SFTISRSCKV-------HAIEDILSFRF 284 (297)
Q Consensus 264 -~~s~~~~c~v-------~~~~~~~~~~~ 284 (297)
+||+++||++ .+.+++..++-
T Consensus 324 TvFSa~nY~~~~~~~~~~~N~ga~~~~~~ 352 (377)
T cd07418 324 TLFSAPDYPQFQATEERYNNKGAYIILQP 352 (377)
T ss_pred EEecCCccccccccccccCcceEEEEEec
Confidence 5899999964 56666666544
No 14
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=2e-60 Score=443.75 Aligned_cols=263 Identities=44% Similarity=0.826 Sum_probs=234.5
Q ss_pred HHHHHcCCC-----CccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEecCCCCHHHHHHHHHhCCCCCC------
Q 022466 19 IRRLLEGRG-----GKQVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPT------ 87 (297)
Q Consensus 19 i~~~~~~~~-----~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~vvGDIHG~~~~L~~il~~~~~~~~------ 87 (297)
|.+++.+.. ..+..|+++++.+||++|.++|++||++++++.|++||||||||+++|.++|+..++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~ 81 (311)
T cd07419 2 ITHLLKPRIWKPPTDRRFFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDI 81 (311)
T ss_pred hHHhcCcccccCccccccCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCCC
Confidence 455665521 345779999999999999999999999999999999999999999999999999998754
Q ss_pred --CceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhhhcChHHHHHHHHH------HHHHHHHHHh
Q 022466 88 --ANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNV------RLWKIFTDCF 159 (297)
Q Consensus 88 --~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~------~~~~~~~~~~ 159 (297)
.+|||||||||||++|+||+.+++++|+.+|.++++||||||.+.++..+||..++..+|+. .+|..+.++|
T Consensus 82 ~~~~~vfLGDyVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f 161 (311)
T cd07419 82 EYIDYLFLGDYVDRGSNSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLF 161 (311)
T ss_pred cCceEEEECCccCCCCChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999988864 6899999999
Q ss_pred hcCCeEEEEcCcEEEecCCCCCCCCChHHhhccCCCC-CCCCCCcccccccCCCCCC--CCCCccCC---CCCc--cccC
Q 022466 160 NCLPVAALINEKILCMHGGLSPELENLDQIRNISRPT-DIPDNGLLCDLLWSDPDAN--IEGWADSD---RGVS--CTFG 231 (297)
Q Consensus 160 ~~LPl~a~i~~~il~vHgGi~p~~~~l~~i~~i~r~~-~~~~~~~~~dllWsdp~~~--~~~~~~~~---rg~~--~~fg 231 (297)
+.||++++++++++|||||++|.+.++++|+.+.||. ..+..+.++|++||||... ..+|.+++ ||.| +.||
T Consensus 162 ~~LPl~avi~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~fg 241 (311)
T cd07419 162 EWLPLAAIIEDKILCMHGGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKFG 241 (311)
T ss_pred HhCchhheecccEEEEccCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeEC
Confidence 9999999999999999999999999999999999998 4456688999999999864 35777776 9988 7999
Q ss_pred HHHHHHHHHHCCCcEEEEcccccccchhcccc-----ccccCCccee-eeecceee
Q 022466 232 SDVVADFLDKNDLDLICRGHQVRHFHFEHADY-----SFTISRSCKV-HAIEDILS 281 (297)
Q Consensus 232 ~~~~~~fl~~~g~~~iIrgH~~~~~G~~~~~~-----~~s~~~~c~v-~~~~~~~~ 281 (297)
++++++||++||+++||||||++++||+++.+ +||+++||+. .+.++++.
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~~ai~~ 297 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHECVMDGFERFAQGKLITLFSATNYCGTAGNAGAILV 297 (311)
T ss_pred HHHHHHHHHHCCCeEEEEechhhhCCeEEeCCCeEEEEecCCcccCCCCceEEEEE
Confidence 99999999999999999999999999998544 6899999976 34444443
No 15
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=2.1e-60 Score=434.60 Aligned_cols=262 Identities=39% Similarity=0.753 Sum_probs=243.7
Q ss_pred ccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEecCCCCHHHHHHHHHhCCCCCCCceeeccCccCCCCCcHHHHHHH
Q 022466 31 VQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLL 110 (297)
Q Consensus 31 ~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll 110 (297)
..++++....++.++..+|++|++++++++||+|+|||||||.||+++|+..|-|.+++|+|||||||||..|+||+.+|
T Consensus 59 Grl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDYVDRGyFSiECvlYL 138 (517)
T KOG0375|consen 59 GRLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYL 138 (517)
T ss_pred cchhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeeccccccceeeeehHHHH
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhCCCcEEEecCCchhhhhHhhhcChHHHHHHHHHHHHHHHHHHhhcCCeEEEEcCcEEEecCCCCCCCCChHHhh
Q 022466 111 LAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPELENLDQIR 190 (297)
Q Consensus 111 ~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~LPl~a~i~~~il~vHgGi~p~~~~l~~i~ 190 (297)
.+||+.||..+++||||||++.+...+.|..||..+|+.++|+++.+.|+.||+||+.+.+++|||||+||.+.++++|+
T Consensus 139 wsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKYse~vYdaCmesFd~LPLAAlmNqQflCVHGGlSPEi~tl~DIr 218 (517)
T KOG0375|consen 139 WSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMESFDCLPLAALMNQQFLCVHGGLSPEIHTLDDIR 218 (517)
T ss_pred HHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhccHHHHHHHHHHhccchHHHHhcCceEEecCCCCcccccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCcccccccCCCCCCC------CCCccC-CCCCccccCHHHHHHHHHHCCCcEEEEcccccccchhcccc
Q 022466 191 NISRPTDIPDNGLLCDLLWSDPDANI------EGWADS-DRGVSCTFGSDVVADFLDKNDLDLICRGHQVRHFHFEHADY 263 (297)
Q Consensus 191 ~i~r~~~~~~~~~~~dllWsdp~~~~------~~~~~~-~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~~~~~ 263 (297)
++.|..++|.-+..||+|||||.++. +-|..| .||+++.|...++.+||+.||+--|||+|+.++.||+.+.+
T Consensus 219 ~l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAHEAQDaGYRMYrk 298 (517)
T KOG0375|consen 219 KLDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRK 298 (517)
T ss_pred hhhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhhhhhhhhhhhhhhhc
Confidence 99999999999999999999997652 335555 69999999999999999999999999999999999999876
Q ss_pred -----------ccccCCcc--------------eeeeecceeeEeeCcee-cccc
Q 022466 264 -----------SFTISRSC--------------KVHAIEDILSFRFPFVS-HFYD 292 (297)
Q Consensus 264 -----------~~s~~~~c--------------~v~~~~~~~~~~~~~~~-~~~~ 292 (297)
.||++||= .|++|-|+---.+||-. +|-|
T Consensus 299 sqttGFPSLiTiFSAPNYLDvYnNKAAvLKYEnNVMNIRQFncSPHPYWLPnFMD 353 (517)
T KOG0375|consen 299 SQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSPHPYWLPNFMD 353 (517)
T ss_pred ccccCCchheeeecCCchhhhhccHHHHhhhhcccceeeccCCCCCCccccchhh
Confidence 47999994 45777777766677655 4443
No 16
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-59 Score=409.00 Aligned_cols=265 Identities=46% Similarity=0.918 Sum_probs=246.9
Q ss_pred HHHHHHHHHHcCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEecCCCCHHHHHHHHHhCCCCCCCceeec
Q 022466 14 VLDDIIRRLLEGRGGKQVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLFL 93 (297)
Q Consensus 14 ~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~vfL 93 (297)
.++..|+++... .++++.++..+|+.|+++|.+|.++.+++.|++|+||+||||++|.++++..|..++..|+|+
T Consensus 19 ~vd~~ie~L~~c-----k~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdtnylfm 93 (319)
T KOG0371|consen 19 DVDPWIEQLYKC-----KPLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDTNYLFM 93 (319)
T ss_pred ccccchHHHHhc-----CCCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCcceeee
Confidence 466778888755 478899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhhhcChHHHHHHH-HHHHHHHHHHHhhcCCeEEEEcCcE
Q 022466 94 GDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRF-NVRLWKIFTDCFNCLPVAALINEKI 172 (297)
Q Consensus 94 GD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~-~~~~~~~~~~~~~~LPl~a~i~~~i 172 (297)
|||||||++|.|++.+|.++|++||++|.+||||||.+.+.+.|||++||.++| +..+|+.|.+.|+.+|++|.|++++
T Consensus 94 GDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali~~~i 173 (319)
T KOG0371|consen 94 GDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESKI 173 (319)
T ss_pred eeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhhccce
Confidence 999999999999999999999999999999999999999999999999999999 5789999999999999999999999
Q ss_pred EEecCCCCCCCCChHHhhccCCCCCCCCCCcccccccCCCCCCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEccc
Q 022466 173 LCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQ 252 (297)
Q Consensus 173 l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~ 252 (297)
+|+|||++|.+.+++.++.+.|..++|..+.+||+|||||.. ..+|..+|||.++.||.+..++|-++||++++-|+||
T Consensus 174 fc~HGgLspsi~tld~~r~~dr~~evphegpmcDlLwsdpdd-r~gwg~sprgag~tfg~di~~~fn~~n~lslisRahq 252 (319)
T KOG0371|consen 174 FCLHGGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHKNGLSLISRAHQ 252 (319)
T ss_pred eeccCCcCcccchHHHHHHHHHhhcccCCCChhheeccCccc-CCCCCCCCCCCCcccchhhHHHhhccCCchHhHHHHH
Confidence 999999999999999999999999999999999999999985 5899999999999999999999999999999999999
Q ss_pred ccccchhcccc-----ccccCCcc-------eeeeecceeeEee
Q 022466 253 VRHFHFEHADY-----SFTISRSC-------KVHAIEDILSFRF 284 (297)
Q Consensus 253 ~~~~G~~~~~~-----~~s~~~~c-------~v~~~~~~~~~~~ 284 (297)
.+++||.|++. .||++||| +.+-+++.+-.+|
T Consensus 253 lvm~g~nW~~~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f 296 (319)
T KOG0371|consen 253 LVMEGYNWYHLWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDF 296 (319)
T ss_pred HHhcccceeeecceeEEccCCchhhccccHHHHhhhhhccCcce
Confidence 99999999875 58999997 3344455544433
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-48 Score=364.22 Aligned_cols=258 Identities=32% Similarity=0.647 Sum_probs=225.6
Q ss_pred CChHHHHHHHHHHHcCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeec----CcEEEEecCCCCHHHHHHHHHhCCCC
Q 022466 10 MDKVVLDDIIRRLLEGRGGKQVQLSESEIRQLCVNARQIFLSQPNLVEVE----APIRICGDVHGQYQDLLRLFEHGGYP 85 (297)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~----~~i~vvGDIHG~~~~L~~il~~~~~~ 85 (297)
.....++.+|+.... +..|++..+..++.+|+++|++-|++-+++ ..|+|+||+||.++||.-+|.+.|+|
T Consensus 116 l~~~~i~~lieaFk~-----kq~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlP 190 (631)
T KOG0377|consen 116 LRKNHIDLLIEAFKK-----KQRLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLP 190 (631)
T ss_pred cCchHHHHHHHHHHH-----hhhccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCC
Confidence 344566677776643 348899999999999999999999999986 46999999999999999999999999
Q ss_pred CCC-ceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhhhcChHHHHHHH---HHHHHHHHHHHhhc
Q 022466 86 PTA-NYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRF---NVRLWKIFTDCFNC 161 (297)
Q Consensus 86 ~~~-~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~---~~~~~~~~~~~~~~ 161 (297)
..+ .|||.||+||||.+|+|+|..|+++.+.||..+++-|||||..++|..|||..|...+| +.++.+.+.++|++
T Consensus 191 S~~npYvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy~W 270 (631)
T KOG0377|consen 191 SSSNPYVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVYRW 270 (631)
T ss_pred CCCCCeeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHHHh
Confidence 765 59999999999999999999999999999999999999999999999999999999999 56899999999999
Q ss_pred CCeEEEEcCcEEEecCCCCCCCCChHHhhccCCCC---------CCC-------------CCCcccccccCCCCCCCCCC
Q 022466 162 LPVAALINEKILCMHGGLSPELENLDQIRNISRPT---------DIP-------------DNGLLCDLLWSDPDANIEGW 219 (297)
Q Consensus 162 LPl~a~i~~~il~vHgGi~p~~~~l~~i~~i~r~~---------~~~-------------~~~~~~dllWsdp~~~~~~~ 219 (297)
||++.+++.++|.||||+|. .++++-+.+|+|.. +.. ++..+.|++||||......|
T Consensus 271 LPi~tiid~~ilvvHGGiSd-~Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~ 349 (631)
T KOG0377|consen 271 LPIGTIIDSRILVVHGGISD-STDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCV 349 (631)
T ss_pred cchhhhcccceEEEecCccc-chhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCC
Confidence 99999999999999999984 45777777766521 110 13456799999999775666
Q ss_pred ccCCCCCccccCHHHHHHHHHHCCCcEEEEcccccccchhcccc-----ccccCCccee
Q 022466 220 ADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVRHFHFEHADY-----SFTISRSCKV 273 (297)
Q Consensus 220 ~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~~~~~-----~~s~~~~c~v 273 (297)
...-||.|.+||+|++..||++.+++++||+|||.++||+++++ .||++||-.+
T Consensus 350 pNt~RGgG~yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~Hd~kvlTiFSASNYYe~ 408 (631)
T KOG0377|consen 350 PNTLRGGGCYFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCHDNKVLTIFSASNYYEI 408 (631)
T ss_pred cccccCCcceeCchHHHHHHHHhCceeeeeecccCCCcceeeeCCeEEEEEeccchhee
Confidence 66679999999999999999999999999999999999999887 5899999433
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=5.2e-42 Score=326.00 Aligned_cols=243 Identities=43% Similarity=0.795 Sum_probs=227.0
Q ss_pred ccCCHHHHHHHHHHHHHHHhhCCCeeeecC----cEEEEecCCCCHHHHHHHHHhCCCCCC-CceeeccCccCCCCCcHH
Q 022466 31 VQLSESEIRQLCVNARQIFLSQPNLVEVEA----PIRICGDVHGQYQDLLRLFEHGGYPPT-ANYLFLGDYVDRGKQSLE 105 (297)
Q Consensus 31 ~~~~~~~~~~l~~~~~~il~~ep~~l~~~~----~i~vvGDIHG~~~~L~~il~~~~~~~~-~~~vfLGD~VDrG~~s~e 105 (297)
..++...+.+|+..+.++++++|++++++. .+.|+||+||++.++.++++..|.|+. ..|+|.||++|||..|.|
T Consensus 181 ~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfngdfv~rgs~s~e 260 (476)
T KOG0376|consen 181 KKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSWSVE 260 (476)
T ss_pred cccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccccccCceeeeccccee
Confidence 356667788999999999999999999863 589999999999999999999999875 569999999999999999
Q ss_pred HHHHHHHhhhhCCCcEEEecCCchhhhhHhhhcChHHHHHHHHHHHHHHHHHHhhcCCeEEEEcCcEEEecCCCC-CCCC
Q 022466 106 TICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLS-PELE 184 (297)
Q Consensus 106 vl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~LPl~a~i~~~il~vHgGi~-p~~~ 184 (297)
+...+...|+.+|++++++|||||+..++..|||.+++..+|..+.+..+.+.|..||++..|+++++.+|||+. |+-.
T Consensus 261 ~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte~~~~~f~~~f~~LPl~~~i~~~~~~~hgglf~~~~v 340 (476)
T KOG0376|consen 261 VILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTEEMFNLFSEVFIWLPLAHLINNKVLVMHGGLFSPDGV 340 (476)
T ss_pred eeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHHHHHHhhhhhhccccchhhhcCceEEEecCcCCCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999996 4556
Q ss_pred ChHHhhccCCCCCCCCCCcccccccCCCCCCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcccccccchhcccc-
Q 022466 185 NLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVRHFHFEHADY- 263 (297)
Q Consensus 185 ~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~~~~~- 263 (297)
+++++++|.|+...++.+..+++|||||.+. ++..++.||.|..||++++++||+.|+++.|||||++.+.||++-+.
T Consensus 341 ~l~d~r~i~r~~~~~~~~~~~~~lws~pq~~-~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~rshe~~d~gy~~eh~g 419 (476)
T KOG0376|consen 341 TLEDFRNIDRFEQPPEEGLMCELLWSDPQPA-NGRSPSKRGVGLQFGPDVTERFLQDNNLDKIIRSHEVKDEGYEVEHSG 419 (476)
T ss_pred cHHHHHhhhhccCCcccccccccccCCCccc-cCCCccccCceeeeCCCchhhHHhhcchHHHhhccccCCCceeeecCC
Confidence 8999999999988889999999999999964 89999999999999999999999999999999999999999998764
Q ss_pred ----ccccCCcceee
Q 022466 264 ----SFTISRSCKVH 274 (297)
Q Consensus 264 ----~~s~~~~c~v~ 274 (297)
+||+||||..+
T Consensus 420 ~l~tvfsapnycd~~ 434 (476)
T KOG0376|consen 420 KLITVFSAPNYCDQM 434 (476)
T ss_pred cEEEEecCcchhhhc
Confidence 79999999653
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=9.9e-34 Score=251.42 Aligned_cols=200 Identities=51% Similarity=0.861 Sum_probs=163.2
Q ss_pred EEEecCCCCHHHHHHHHHhCCCCCCCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhhhcChHH
Q 022466 63 RICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDE 142 (297)
Q Consensus 63 ~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e 142 (297)
+|||||||++++|.++++..+..+.+.+|||||+||||+.+.+++.++.+++.. |.++++|+||||.+.++...++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 589999999999999999999988999999999999999999999999999877 8899999999999988776655433
Q ss_pred H---------HHHHHHHHHHHHHHHhhcCCeEEEEcC-cEEEecCCCCCCCCChHHhhccCCCCCCCCCCcccccccCCC
Q 022466 143 C---------KRRFNVRLWKIFTDCFNCLPVAALINE-KILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDP 212 (297)
Q Consensus 143 ~---------~~~~~~~~~~~~~~~~~~LPl~a~i~~-~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp 212 (297)
. .......++..+.+++..||+++.++. +++|||||++|.....++.. ..+......+++|++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 2 222345677888999999999999986 89999999999876555544 2233456789999999
Q ss_pred CCCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcccccccchh--ccccccccCCccee
Q 022466 213 DANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVRHFHFE--HADYSFTISRSCKV 273 (297)
Q Consensus 213 ~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~--~~~~~~s~~~~c~v 273 (297)
.........+.++. |+++.+.|++.++.+.|||||+++..|+. ...+.++++..|..
T Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~ 212 (225)
T cd00144 154 LELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNY 212 (225)
T ss_pred CCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecCCcc
Confidence 85433333444444 99999999999999999999999999975 45556777777643
No 20
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.95 E-value=1.5e-27 Score=216.03 Aligned_cols=122 Identities=23% Similarity=0.417 Sum_probs=98.5
Q ss_pred CcEEEEecCCCCHHHHHHHHHhCCCC---------CCCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchh
Q 022466 60 APIRICGDVHGQYQDLLRLFEHGGYP---------PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHED 130 (297)
Q Consensus 60 ~~i~vvGDIHG~~~~L~~il~~~~~~---------~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~ 130 (297)
++++||||||||++.|.++|+++++. +.+++|||||||||||+|.+|+++++++. .+.++++||||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHH
Confidence 57999999999999999999998874 45789999999999999999999998874 56689999999999
Q ss_pred hhhHhhhcC-------hHHHHHHH-------HHHHHHHHHHHhhcCCeEEEEc-CcEEEecCCCCCCC
Q 022466 131 AKINRIYGF-------YDECKRRF-------NVRLWKIFTDCFNCLPVAALIN-EKILCMHGGLSPEL 183 (297)
Q Consensus 131 ~~~~~~~gf-------~~e~~~~~-------~~~~~~~~~~~~~~LPl~a~i~-~~il~vHgGi~p~~ 183 (297)
++++...+- ..+....| ...+.+.+.+|++++|++..++ ++++|||||+.|..
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~ 146 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDY 146 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHh
Confidence 987654321 11222233 1346678899999999998774 57999999998863
No 21
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.94 E-value=4.7e-26 Score=209.09 Aligned_cols=204 Identities=19% Similarity=0.318 Sum_probs=137.9
Q ss_pred CcEEEEecCCCCHHHHHHHHHhCCCC-CCCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhhhc
Q 022466 60 APIRICGDVHGQYQDLLRLFEHGGYP-PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYG 138 (297)
Q Consensus 60 ~~i~vvGDIHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~g 138 (297)
|+++||||||||++.|.++|+.+++. ..+.++||||+|||||+|.+|++++.++ +.++++|+||||.+.++..++
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~g 76 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAAG 76 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhcC
Confidence 57999999999999999999999875 4678999999999999999999999876 457999999999998877666
Q ss_pred ChH-----HHHHHHHHHHHHHHHHHhhcCCeEEEE-cCcEEEecCCCCCCCCChHHh---hccCCCCCCCCC-Ccccccc
Q 022466 139 FYD-----ECKRRFNVRLWKIFTDCFNCLPVAALI-NEKILCMHGGLSPELENLDQI---RNISRPTDIPDN-GLLCDLL 208 (297)
Q Consensus 139 f~~-----e~~~~~~~~~~~~~~~~~~~LPl~a~i-~~~il~vHgGi~p~~~~l~~i---~~i~r~~~~~~~-~~~~dll 208 (297)
... ...........+.+.+|++++|+...+ ++++++||||++|.+...+.+ ++++..+..++. ..+..+.
T Consensus 77 ~~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~~~~~~~~a~eve~~l~~~~~~~~~~~my 156 (275)
T PRK00166 77 IKRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWDLATALALAREVEAVLRSDDYRDFLANMY 156 (275)
T ss_pred CccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCCHHHHHHHHHHHHHHhcCCcHHHHHHHhc
Confidence 431 111111223456688999999999776 567999999999987422211 112111211111 2344445
Q ss_pred cCCCCCCCCCCccCCCCCc-cccCHHHHHH--HHHHC-----------------------------CCcEEEEccccccc
Q 022466 209 WSDPDANIEGWADSDRGVS-CTFGSDVVAD--FLDKN-----------------------------DLDLICRGHQVRHF 256 (297)
Q Consensus 209 Wsdp~~~~~~~~~~~rg~~-~~fg~~~~~~--fl~~~-----------------------------g~~~iIrgH~~~~~ 256 (297)
|+.|. .|.++-.|.. ..|.-.++.+ ||... .-..||-||...-.
T Consensus 157 ~~~p~----~W~~~l~~~~r~r~~~n~~trmR~~~~~g~l~~~~k~~~~~~~~~~~pWf~~~~~~~~~~~i~fGHwa~l~ 232 (275)
T PRK00166 157 GNEPD----RWSPDLTGLERLRYIINAFTRMRFCTPDGRLDFKCKGPPDEAPAGLKPWFEVPGRKTRDYTIVFGHWAALE 232 (275)
T ss_pred CCCcC----ccCcccCchHHHHHHHHHHhhhhcccCCCceeecccCCcccCCcCCCCCccCcCccCCCCeEEEecCcccC
Confidence 54443 3444333321 1111111111 22222 23479999999988
Q ss_pred chhccccccccCCcc
Q 022466 257 HFEHADYSFTISRSC 271 (297)
Q Consensus 257 G~~~~~~~~s~~~~c 271 (297)
|.....+...++..|
T Consensus 233 G~~~~~~~~~LDtGc 247 (275)
T PRK00166 233 GLTTPPNIIALDTGC 247 (275)
T ss_pred CccCCCCeEEeeccc
Confidence 998888888888888
No 22
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.93 E-value=2.1e-25 Score=199.13 Aligned_cols=115 Identities=24% Similarity=0.369 Sum_probs=91.9
Q ss_pred EEEecCCCCHHHHHHHHHhCCCC--------CCCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhH
Q 022466 63 RICGDVHGQYQDLLRLFEHGGYP--------PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKIN 134 (297)
Q Consensus 63 ~vvGDIHG~~~~L~~il~~~~~~--------~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~ 134 (297)
+||||||||++.|.++|+.+++. +.+.+|||||||||||+|.+|++++.+++ .+.++++|+||||.+++.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~--~~~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMV--DAGHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhh--cCCCEEEEEccCcHHHHH
Confidence 68999999999999999998875 46789999999999999999999999885 345899999999999875
Q ss_pred hhhcC------------h-----HHHHHHHH--HHHHHHHHHHhhcCCeEEEEcCcEEEecCCCC
Q 022466 135 RIYGF------------Y-----DECKRRFN--VRLWKIFTDCFNCLPVAALINEKILCMHGGLS 180 (297)
Q Consensus 135 ~~~gf------------~-----~e~~~~~~--~~~~~~~~~~~~~LPl~a~i~~~il~vHgGi~ 180 (297)
...+. . .+..+.+. .+..+.+.+||++||+....+ +++|||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~~-~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDLG-GVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEEC-CEEEEECCcC
Confidence 43221 0 11222222 345678899999999998765 6999999986
No 23
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.93 E-value=3.4e-25 Score=199.15 Aligned_cols=120 Identities=28% Similarity=0.526 Sum_probs=97.8
Q ss_pred CcEEEEecCCCCHHHHHHHHHhCCCCC----------CCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCch
Q 022466 60 APIRICGDVHGQYQDLLRLFEHGGYPP----------TANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHE 129 (297)
Q Consensus 60 ~~i~vvGDIHG~~~~L~~il~~~~~~~----------~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE 129 (297)
+||.||||||||+.+|+++|+.+++.+ .++++||||||||||+|.||+++|.+++. +.++++|+||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~--~~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVA--AGAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhh--CCcEEEEECCcH
Confidence 589999999999999999999998753 45899999999999999999999998864 357999999999
Q ss_pred hhhhHhhhc--------ChHHHHHHHH---HHHHHHHHHHhhcCCeEEEEc-CcEEEecCCCCCC
Q 022466 130 DAKINRIYG--------FYDECKRRFN---VRLWKIFTDCFNCLPVAALIN-EKILCMHGGLSPE 182 (297)
Q Consensus 130 ~~~~~~~~g--------f~~e~~~~~~---~~~~~~~~~~~~~LPl~a~i~-~~il~vHgGi~p~ 182 (297)
.+.++...+ +. +....+. ..+.+.+.+||+.||+...++ ++++|||||+++.
T Consensus 79 ~~l~~~~~~~~~~~~~~~~-~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~ 142 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLE-ETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEE 142 (234)
T ss_pred HHHHHHhcCCCccccCccc-chHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChH
Confidence 998765322 22 2223332 456778899999999998775 4699999998874
No 24
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.93 E-value=2.3e-25 Score=197.09 Aligned_cols=162 Identities=22% Similarity=0.338 Sum_probs=119.2
Q ss_pred EEEecCCCCHHHHHHHHHhCCC--------CCCCceeeccCccCCCCCcHHHHHHHHHhhhh---CCCcEEEecCCchhh
Q 022466 63 RICGDVHGQYQDLLRLFEHGGY--------PPTANYLFLGDYVDRGKQSLETICLLLAYKIR---YPDKIHLLRGNHEDA 131 (297)
Q Consensus 63 ~vvGDIHG~~~~L~~il~~~~~--------~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~---~p~~v~~lrGNHE~~ 131 (297)
+||||||||+++|.++|+.+++ .+.+.+|++||+||||+++.++++++.+++.. .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999999885 35678999999999999999999999999754 467899999999999
Q ss_pred hhHhhhcChH--HHHHHHH-----HHH---HHHHHHHhhcCCeEEEEcCcEEEecCCCCCCCCChHHhhccCCCCCCCCC
Q 022466 132 KINRIYGFYD--ECKRRFN-----VRL---WKIFTDCFNCLPVAALINEKILCMHGGLSPELENLDQIRNISRPTDIPDN 201 (297)
Q Consensus 132 ~~~~~~gf~~--e~~~~~~-----~~~---~~~~~~~~~~LPl~a~i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~ 201 (297)
.++..+.+.. +...... ..+ ...+.+|++++|+...++ +++|||||++|
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~-------------------- 139 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGP-------------------- 139 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHH--------------------
Confidence 9875443321 1111100 111 134578999999998886 59999999943
Q ss_pred CcccccccCCCCCCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcccccccchh
Q 022466 202 GLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVRHFHFE 259 (297)
Q Consensus 202 ~~~~dllWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~ 259 (297)
+|++........ .+ -+.+.++++++.++.+++|+|||+++.|..
T Consensus 140 ------~w~r~y~~~~~~---~~-----~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~ 183 (208)
T cd07425 140 ------LWYRGYSKETSD---KE-----CAAAHLDKVLERLGAKRMVVGHTPQEGGIV 183 (208)
T ss_pred ------HHhhHhhhhhhh---cc-----chHHHHHHHHHHcCCCeEEEcCeeeecCce
Confidence 332221000000 00 022568889999999999999999998874
No 25
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.93 E-value=3e-25 Score=201.82 Aligned_cols=119 Identities=26% Similarity=0.404 Sum_probs=98.9
Q ss_pred EEEEecCCCCHHHHHHHHHhCCCC-CCCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhhhcCh
Q 022466 62 IRICGDVHGQYQDLLRLFEHGGYP-PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFY 140 (297)
Q Consensus 62 i~vvGDIHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~ 140 (297)
++||||||||+++|+++|+++++. +.+.++|+||+|||||+|.||++++.+++ .++++|+||||.+.++..++..
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 589999999999999999999986 57889999999999999999999998875 5899999999999987766643
Q ss_pred H-----HHHHHHHHHHHHHHHHHhhcCCeEEEEcC-cEEEecCCCCCCCC
Q 022466 141 D-----ECKRRFNVRLWKIFTDCFNCLPVAALINE-KILCMHGGLSPELE 184 (297)
Q Consensus 141 ~-----e~~~~~~~~~~~~~~~~~~~LPl~a~i~~-~il~vHgGi~p~~~ 184 (297)
. .....+.....+.+.+|++++|+...+++ ++++||||++|.+.
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~ 126 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQWS 126 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCCC
Confidence 1 11111233344678899999999988875 79999999999873
No 26
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.91 E-value=3.2e-24 Score=195.98 Aligned_cols=121 Identities=23% Similarity=0.388 Sum_probs=101.8
Q ss_pred CcEEEEecCCCCHHHHHHHHHhCCCC-CCCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhhhc
Q 022466 60 APIRICGDVHGQYQDLLRLFEHGGYP-PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYG 138 (297)
Q Consensus 60 ~~i~vvGDIHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~g 138 (297)
|+++||||||||+++|+++|+++++. ..+.++|+||+|||||+|++|+.++.++. +++++|+||||.+.++..+|
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g 76 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAG 76 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcC
Confidence 57899999999999999999999976 46789999999999999999999998773 46889999999999987776
Q ss_pred Ch-----HHHHHHHHHHHHHHHHHHhhcCCeEEEEc-CcEEEecCCCCCCCC
Q 022466 139 FY-----DECKRRFNVRLWKIFTDCFNCLPVAALIN-EKILCMHGGLSPELE 184 (297)
Q Consensus 139 f~-----~e~~~~~~~~~~~~~~~~~~~LPl~a~i~-~~il~vHgGi~p~~~ 184 (297)
+. +.....+.....+.+.+|++++|+....+ .++++||||++|.+.
T Consensus 77 ~~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~ 128 (279)
T TIGR00668 77 ISRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWD 128 (279)
T ss_pred CCccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCc
Confidence 52 23333345566788999999999997664 369999999999883
No 27
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.91 E-value=9.1e-24 Score=188.05 Aligned_cols=175 Identities=21% Similarity=0.309 Sum_probs=116.1
Q ss_pred CcEEEEecCCCCHHHHHHHHHhCCCC-CCCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhhhc
Q 022466 60 APIRICGDVHGQYQDLLRLFEHGGYP-PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYG 138 (297)
Q Consensus 60 ~~i~vvGDIHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~g 138 (297)
+|++||||||||+++|+++|+.+++. ..++++||||+|||||+|.+|++++.+ .++++|+||||.+.++...+
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~------~~~~~v~GNHE~~~l~~~~~ 90 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEE------HWVRAVRGNHEQMALDALAS 90 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHc------CCceEeeCchHHHHHHHHHC
Confidence 59999999999999999999999886 567899999999999999999999854 26889999999998875322
Q ss_pred ChH--------HHHHHH---HHHHHHHHHHHhhcCCeEEEEc---CcEEEecCCCCCCCCChHHhhccCCCCCCCCCCcc
Q 022466 139 FYD--------ECKRRF---NVRLWKIFTDCFNCLPVAALIN---EKILCMHGGLSPELENLDQIRNISRPTDIPDNGLL 204 (297)
Q Consensus 139 f~~--------e~~~~~---~~~~~~~~~~~~~~LPl~a~i~---~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~ 204 (297)
-.. +....+ ..+.+..+.+|+++||+...+. +++++||||++... .+. ..+ ...
T Consensus 91 ~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p~~~--~~~----~~~------~~~ 158 (218)
T PRK11439 91 QQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYPADV--YEW----QKD------VDL 158 (218)
T ss_pred CccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCCCCc--hhh----hcc------CCc
Confidence 110 000111 1234456678999999997653 46999999984321 010 011 012
Q ss_pred cccccCCCCCCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcccccccchhccccccccCCcc
Q 022466 205 CDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVRHFHFEHADYSFTISRSC 271 (297)
Q Consensus 205 ~dllWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~~~~~~~s~~~~c 271 (297)
.+++|+++... ..+. .+ ...|.+.||.|||+++... ...+...+.-.|
T Consensus 159 ~~~~w~r~~~~-~~~~--~~---------------~~~~~~~vv~GHT~~~~~~-~~~~~i~IDtGa 206 (218)
T PRK11439 159 HQVLWSRSRLG-ERQK--GQ---------------GITGADHFWFGHTPLRHRV-DIGNLHYIDTGA 206 (218)
T ss_pred cceEEcChhhh-hccc--cc---------------cccCCCEEEECCccCCCcc-ccCCEEEEECCC
Confidence 35688654311 0000 00 1125678999999987543 334444444444
No 28
>PHA02239 putative protein phosphatase
Probab=99.90 E-value=4.8e-23 Score=185.34 Aligned_cols=171 Identities=23% Similarity=0.309 Sum_probs=119.1
Q ss_pred CcEEEEecCCCCHHHHHHHHHhCCCC--CCCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhhh
Q 022466 60 APIRICGDVHGQYQDLLRLFEHGGYP--PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIY 137 (297)
Q Consensus 60 ~~i~vvGDIHG~~~~L~~il~~~~~~--~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~ 137 (297)
|++++||||||+++.|.++++.+... +.+.+||+|||||||++|.+++..++.+. ..+.++++|+||||.++++...
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~-~~~~~~~~l~GNHE~~~l~~~~ 79 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLM-SNDDNVVTLLGNHDDEFYNIME 79 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHh-hcCCCeEEEECCcHHHHHHHHh
Confidence 57999999999999999999987543 46789999999999999999999998875 3466899999999998765321
Q ss_pred cC-----h---------HHHHHHHH-------------------------------HHHHHHHHHHhhcCCeEEEEcCcE
Q 022466 138 GF-----Y---------DECKRRFN-------------------------------VRLWKIFTDCFNCLPVAALINEKI 172 (297)
Q Consensus 138 gf-----~---------~e~~~~~~-------------------------------~~~~~~~~~~~~~LPl~a~i~~~i 172 (297)
.. . .+....|+ ...+..+..|+++||+....+ ++
T Consensus 80 ~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~~-~~ 158 (235)
T PHA02239 80 NVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKED-KY 158 (235)
T ss_pred CchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEEC-CE
Confidence 10 0 11122331 012345567999999997765 69
Q ss_pred EEecCCCCCCCCChHHhhccCCCCCCCCCCcccccccCCCCCCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEccc
Q 022466 173 LCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQ 252 (297)
Q Consensus 173 l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~ 252 (297)
+|||||+.|... +++ ....+++|.++ . .+. ..=+.||.|||
T Consensus 159 ifVHAGi~p~~~-~~~-------------q~~~~llWiR~-f-----~~~-------------------~~g~~vV~GHT 199 (235)
T PHA02239 159 IFSHSGGVSWKP-VEE-------------QTIDQLIWSRD-F-----QPR-------------------KDGFTYVCGHT 199 (235)
T ss_pred EEEeCCCCCCCC-hhh-------------CCHhHeEEecc-c-----CCC-------------------CCCcEEEECCC
Confidence 999999988632 221 12358899765 2 110 12347999999
Q ss_pred ccccchhc-cccccccCCcc
Q 022466 253 VRHFHFEH-ADYSFTISRSC 271 (297)
Q Consensus 253 ~~~~G~~~-~~~~~s~~~~c 271 (297)
++.++... ..+...++-.|
T Consensus 200 p~~~~~~~~~~~~I~IDtGa 219 (235)
T PHA02239 200 PTDSGEVEINGDMLMCDVGA 219 (235)
T ss_pred CCCCCcccccCCEEEeecCc
Confidence 99765322 23345555555
No 29
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.90 E-value=8e-23 Score=180.37 Aligned_cols=168 Identities=23% Similarity=0.306 Sum_probs=115.6
Q ss_pred CcEEEEecCCCCHHHHHHHHHhCCCC-CCCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhhhc
Q 022466 60 APIRICGDVHGQYQDLLRLFEHGGYP-PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYG 138 (297)
Q Consensus 60 ~~i~vvGDIHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~g 138 (297)
+|++||||||||+.+|+++++..+.. ..+.++++||+||||+++.+++.++.+ .++++|+||||.+.+....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 47999999999999999999998875 467788999999999999999998854 36899999999998876544
Q ss_pred C--hHHHHHHH---------HHHHHHHHHHHhhcCCeEEEEc---CcEEEecCCCCCCCCChHHhhccCCCCCCCCCCcc
Q 022466 139 F--YDECKRRF---------NVRLWKIFTDCFNCLPVAALIN---EKILCMHGGLSPELENLDQIRNISRPTDIPDNGLL 204 (297)
Q Consensus 139 f--~~e~~~~~---------~~~~~~~~~~~~~~LPl~a~i~---~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~ 204 (297)
- ..+..... ....++.+.+|+++||+...++ .++++||||+++... ...+. + +..+....
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~-~~~~~---~--~~~~~~~~ 148 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDW-SDGVG---A--VTLRPEDI 148 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchh-hhhhh---c--cccCcccc
Confidence 2 11111111 1224566788999999998774 369999999865431 11100 0 11122344
Q ss_pred cccccCCCCCCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcccccccch
Q 022466 205 CDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVRHFHF 258 (297)
Q Consensus 205 ~dllWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~ 258 (297)
.+++|+++...... +...-+.+.||.||++.+..+
T Consensus 149 ~~~~w~~~~~~~~~-------------------~~~~~~~~~iV~GHTh~~~~~ 183 (207)
T cd07424 149 EELLWSRTRIQKAQ-------------------TQPIKGVDAVVHGHTPVKRPL 183 (207)
T ss_pred eeeeeccchhhhcC-------------------ccccCCCCEEEECCCCCCcce
Confidence 57889866421000 000114578999999987543
No 30
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.89 E-value=9.2e-23 Score=186.89 Aligned_cols=149 Identities=22% Similarity=0.309 Sum_probs=107.8
Q ss_pred CcEEEEecCCCCHHHHHHHHHhCCCC------CCCceeeccCccCCCCCcHHHHHHHHHhhhhCCC-cEEEecCCchhhh
Q 022466 60 APIRICGDVHGQYQDLLRLFEHGGYP------PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPD-KIHLLRGNHEDAK 132 (297)
Q Consensus 60 ~~i~vvGDIHG~~~~L~~il~~~~~~------~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~-~v~~lrGNHE~~~ 132 (297)
.++++||||||+++.|.++|+.+... ..+.+|||||||||||+|.+|+++|.+++..+|. ++++|+||||.++
T Consensus 2 ~~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~ 81 (304)
T cd07421 2 RVVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAF 81 (304)
T ss_pred ceEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHH
Confidence 37999999999999999999865422 2456999999999999999999999999888875 6899999999887
Q ss_pred hHhhhc---------Ch------------------------------------------------------HHHHHHHH-
Q 022466 133 INRIYG---------FY------------------------------------------------------DECKRRFN- 148 (297)
Q Consensus 133 ~~~~~g---------f~------------------------------------------------------~e~~~~~~- 148 (297)
+..... |. .+....|+
T Consensus 82 l~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv 161 (304)
T cd07421 82 AAFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGV 161 (304)
T ss_pred HhHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCC
Confidence 643211 00 12223342
Q ss_pred --------HHHHHHHHHHhhcCCeEEEEcCcE-------------EEecCCCCCCCCChHHhhccC-CCCCCCCCCcccc
Q 022466 149 --------VRLWKIFTDCFNCLPVAALINEKI-------------LCMHGGLSPELENLDQIRNIS-RPTDIPDNGLLCD 206 (297)
Q Consensus 149 --------~~~~~~~~~~~~~LPl~a~i~~~i-------------l~vHgGi~p~~~~l~~i~~i~-r~~~~~~~~~~~d 206 (297)
..+.....+|++.||.....++ + +|||||+.|...--+|.+.+. +....|. .+
T Consensus 162 ~~~~~~l~~avP~~H~~fl~~l~~~~~~~~-~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p~----~~ 236 (304)
T cd07421 162 PHGSSDLIKAVPEEHKKFLRNLVWVHEEDD-VCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIPK----IA 236 (304)
T ss_pred CcchHHHHHhCCHHHHHHHHhCCceEEeCc-ccccccccccccceEEEEcccCCCCChHHhhhhhhcccccccc----cc
Confidence 1344567899999999977653 5 999999999986555655432 2222222 27
Q ss_pred cccCCCC
Q 022466 207 LLWSDPD 213 (297)
Q Consensus 207 llWsdp~ 213 (297)
++|.+..
T Consensus 237 ~l~~R~~ 243 (304)
T cd07421 237 PLSGRKN 243 (304)
T ss_pred ccccchh
Confidence 7886654
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.87 E-value=6.9e-22 Score=176.04 Aligned_cols=115 Identities=25% Similarity=0.294 Sum_probs=86.6
Q ss_pred CcEEEEecCCCCHHHHHHHHHhCCCC-CCCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhhhc
Q 022466 60 APIRICGDVHGQYQDLLRLFEHGGYP-PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYG 138 (297)
Q Consensus 60 ~~i~vvGDIHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~g 138 (297)
.|++||||||||+++|+++|+.+.+. ..+.++|+||+|||||+|.+|++++.+ .+++.||||||.+.+.....
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~~ 88 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFET 88 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHhc
Confidence 48999999999999999999998865 467788999999999999999998853 36899999999988864321
Q ss_pred ChH--------HHHHHHH---HHHHHHHHHHhhcCCeEEEEc---CcEEEecCCCC
Q 022466 139 FYD--------ECKRRFN---VRLWKIFTDCFNCLPVAALIN---EKILCMHGGLS 180 (297)
Q Consensus 139 f~~--------e~~~~~~---~~~~~~~~~~~~~LPl~a~i~---~~il~vHgGi~ 180 (297)
-.. +....+. .........|+++||+...+. .++++||||++
T Consensus 89 ~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 89 GDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred CChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 000 0001111 122334566899999998763 46899999984
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.48 E-value=6.3e-13 Score=108.45 Aligned_cols=159 Identities=24% Similarity=0.279 Sum_probs=102.7
Q ss_pred CcEEEEecCCCCHHHH----HHHHHhCCCCCCCceeeccCccCCCCCcHHHHHHH--HHhhhhCCCcEEEecCCchhhhh
Q 022466 60 APIRICGDVHGQYQDL----LRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLL--LAYKIRYPDKIHLLRGNHEDAKI 133 (297)
Q Consensus 60 ~~i~vvGDIHG~~~~L----~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll--~~lk~~~p~~v~~lrGNHE~~~~ 133 (297)
+||+++||+|+..... ..+.......+.+.+|++||+++++..+.+..... .......+..+++++||||....
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 4799999999999987 44444444556677889999999999988777654 45555678899999999999876
Q ss_pred HhhhcChHHHH----------------------------------HHHHHHHHHHHHHHhhcCCeEEEEcCcEEEecCCC
Q 022466 134 NRIYGFYDECK----------------------------------RRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGL 179 (297)
Q Consensus 134 ~~~~gf~~e~~----------------------------------~~~~~~~~~~~~~~~~~LPl~a~i~~~il~vHgGi 179 (297)
...+....... .............+.............++++|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~ 160 (200)
T PF00149_consen 81 NSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPP 160 (200)
T ss_dssp HHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSS
T ss_pred ccccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEEecCC
Confidence 54322111110 00111111222222223333334455799999999
Q ss_pred CCCCCChHHhhccCCCCCCCCCCcccccccCCCCCCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEccccc
Q 022466 180 SPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVR 254 (297)
Q Consensus 180 ~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~ 254 (297)
.+....-... .....+.+.+..++++.++++++.||+..
T Consensus 161 ~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 161 YSSSSDSSSY------------------------------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp STTSSSTHHH------------------------------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred CCcccccccc------------------------------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 8643221111 12345678889999999999999999864
No 33
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.19 E-value=1.7e-10 Score=96.61 Aligned_cols=84 Identities=25% Similarity=0.344 Sum_probs=64.0
Q ss_pred cEEEEecCCCCHHHHHHHHHhCCCCCCCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhhhcCh
Q 022466 61 PIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFY 140 (297)
Q Consensus 61 ~i~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~ 140 (297)
++.++||+||+...+.++++.... .+.++++||++++++.+. + .....+++++||||....
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~--~~~~~~~~V~GNhD~~~~------- 61 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------L--ELKAPVIAVRGNCDGEVD------- 61 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------h--hcCCcEEEEeCCCCCcCC-------
Confidence 588999999999999999998654 678889999999998765 1 123479999999997532
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCeEEEE--c-CcEEEecCCCCC
Q 022466 141 DECKRRFNVRLWKIFTDCFNCLPVAALI--N-EKILCMHGGLSP 181 (297)
Q Consensus 141 ~e~~~~~~~~~~~~~~~~~~~LPl~a~i--~-~~il~vHgGi~p 181 (297)
+..+|....+ + .+++++||...+
T Consensus 62 ------------------~~~~p~~~~~~~~g~~i~v~Hg~~~~ 87 (155)
T cd00841 62 ------------------FPILPEEAVLEIGGKRIFLTHGHLYG 87 (155)
T ss_pred ------------------cccCCceEEEEECCEEEEEECCcccc
Confidence 3456655444 3 369999997643
No 34
>PRK09453 phosphodiesterase; Provisional
Probab=99.14 E-value=2e-10 Score=99.16 Aligned_cols=69 Identities=26% Similarity=0.333 Sum_probs=56.0
Q ss_pred CcEEEEecCCCCHHHHHHHHHhCCCCCCCceeeccCccCCCCC--------cHHHHHHHHHhhhhCCCcEEEecCCchhh
Q 022466 60 APIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQ--------SLETICLLLAYKIRYPDKIHLLRGNHEDA 131 (297)
Q Consensus 60 ~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~--------s~evl~ll~~lk~~~p~~v~~lrGNHE~~ 131 (297)
|++.++||+||++.++.++++.+...+.+.++++||++|+|+. +.+++..+..+ +..+++++||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~----~~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY----ADKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc----CCceEEEccCCcch
Confidence 6899999999999999999988766667889999999999873 45666665433 34799999999975
Q ss_pred h
Q 022466 132 K 132 (297)
Q Consensus 132 ~ 132 (297)
.
T Consensus 77 ~ 77 (182)
T PRK09453 77 V 77 (182)
T ss_pred h
Confidence 3
No 35
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.14 E-value=4.1e-10 Score=94.90 Aligned_cols=63 Identities=19% Similarity=0.174 Sum_probs=49.4
Q ss_pred CcEEEEecCCCCHHHHHHHHHhCCCC-CCCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhh
Q 022466 60 APIRICGDVHGQYQDLLRLFEHGGYP-PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDA 131 (297)
Q Consensus 60 ~~i~vvGDIHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~ 131 (297)
|++.|+||+||+..++..+++..... +.+.++++||++ +.+++..+..+ ...++.++||||..
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~----~~~~~~V~GN~D~~ 64 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDL----AAKVIAVRGNNDGE 64 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHh----CCceEEEccCCCch
Confidence 58999999999998887777666555 567788999998 45677766544 23599999999973
No 36
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.13 E-value=3.4e-10 Score=93.96 Aligned_cols=125 Identities=24% Similarity=0.347 Sum_probs=81.5
Q ss_pred CcEEEEecCCCCHHHHHHHHHhCCCCCCCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhhhcC
Q 022466 60 APIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGF 139 (297)
Q Consensus 60 ~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf 139 (297)
|||+++||+|++...+.++++.+ ...+.++++||++++ .++++.+... .++.++||||..........
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~~~~~~~~ 68 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWAFPNENDE 68 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTHHHSEECT
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCcccccchhhhhc
Confidence 68999999999999999999988 346778899999993 7777776444 79999999996653322110
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcCCeEEEEcCcEEEecCCCCCCCCChHHhhccCCCCCCCCCCcccccccCCCCCCCCCC
Q 022466 140 YDECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGW 219 (297)
Q Consensus 140 ~~e~~~~~~~~~~~~~~~~~~~LPl~a~i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~ 219 (297)
. + +.....+. .-+.+++++||.+..
T Consensus 69 ~--~--------------~~~~~~~~-~~~~~i~~~H~~~~~-------------------------------------- 93 (156)
T PF12850_consen 69 E--Y--------------LLDALRLT-IDGFKILLSHGHPYD-------------------------------------- 93 (156)
T ss_dssp C--S--------------SHSEEEEE-ETTEEEEEESSTSSS--------------------------------------
T ss_pred c--c--------------cccceeee-ecCCeEEEECCCCcc--------------------------------------
Confidence 0 0 11111111 113479999996653
Q ss_pred ccCCCCCccccCHHHHHHHHHHCCCcEEEEcccccccchh
Q 022466 220 ADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVRHFHFE 259 (297)
Q Consensus 220 ~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~ 259 (297)
...+.+.+.+.+...++++++.||.-.+.-.+
T Consensus 94 --------~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 125 (156)
T PF12850_consen 94 --------VQWDPAELREILSRENVDLVLHGHTHRPQVFK 125 (156)
T ss_dssp --------STTTHHHHHHHHHHTTSSEEEESSSSSEEEEE
T ss_pred --------cccChhhhhhhhcccCCCEEEcCCcccceEEE
Confidence 01234556677889999999999998765443
No 37
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.00 E-value=2.6e-09 Score=96.15 Aligned_cols=156 Identities=21% Similarity=0.296 Sum_probs=94.5
Q ss_pred cEEEEecCCCCHHHHH-HHHHhCCCCCCCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhh---
Q 022466 61 PIRICGDVHGQYQDLL-RLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRI--- 136 (297)
Q Consensus 61 ~i~vvGDIHG~~~~L~-~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~--- 136 (297)
+|+++|||||++.... +.++. ...+.++++||+++ .+.+++..+.++ +..+++++||||.......
T Consensus 2 rIa~isDiHg~~~~~~~~~l~~---~~pD~Vl~~GDi~~---~~~~~~~~l~~l----~~p~~~V~GNHD~~~~~~~~~k 71 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALHL---LQPDLVLFVGDFGN---ESVQLVRAISSL----PLPKAVILGNHDAWYDATFRKK 71 (238)
T ss_pred EEEEEecCCCCchHHHHHHHhc---cCCCEEEECCCCCc---ChHHHHHHHHhC----CCCeEEEcCCCcccccccccch
Confidence 6899999999987642 23333 23478889999986 456777766544 3468999999997553200
Q ss_pred -----------------hc------------------------Ch-HHHHHHHH-HHHHHHHHHHhhcCCeEEEEcCcEE
Q 022466 137 -----------------YG------------------------FY-DECKRRFN-VRLWKIFTDCFNCLPVAALINEKIL 173 (297)
Q Consensus 137 -----------------~g------------------------f~-~e~~~~~~-~~~~~~~~~~~~~LPl~a~i~~~il 173 (297)
++ +. .++...|+ ...++.+...++.++.+......|+
T Consensus 72 ~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vl 151 (238)
T cd07397 72 GDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLIL 151 (238)
T ss_pred HHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEE
Confidence 00 00 24555553 3455666777777763333344699
Q ss_pred EecCCCCCCCCChHHhhccCCCCCCCCCCcccccccCCCCCCCCCCccCCCCCccccCHHHHHHHHHHCC----CcEEEE
Q 022466 174 CMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKND----LDLICR 249 (297)
Q Consensus 174 ~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g----~~~iIr 249 (297)
+.|++++-.... .+. .|. ..|.+. +..+|...+.+.+++.. +++++-
T Consensus 152 iaH~~~~G~g~~---~~~------------~cg----------~d~~~~----~~~~G~~~l~~ai~~~~~~~~~~l~~f 202 (238)
T cd07397 152 LAHNGPSGLGSD---AED------------PCG----------RDWKPP----GGDWGDPDLALAISQIQQGRQVPLVVF 202 (238)
T ss_pred EeCcCCcCCCcc---ccc------------ccc----------cccCCc----CCCCCCHHHHHHHHHHhccCCCCEEEe
Confidence 999998753211 110 111 234321 12467666666666544 799999
Q ss_pred cccccc
Q 022466 250 GHQVRH 255 (297)
Q Consensus 250 gH~~~~ 255 (297)
||--..
T Consensus 203 GH~H~~ 208 (238)
T cd07397 203 GHMHHR 208 (238)
T ss_pred CCccCc
Confidence 997654
No 38
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.98 E-value=3e-09 Score=87.34 Aligned_cols=118 Identities=20% Similarity=0.222 Sum_probs=78.8
Q ss_pred cEEEEecCCCCHHHHHHHHHhCCCCCCCceeeccCccCCCCCcH--HHHHHHHHhhhhCCCcEEEecCCchhhhhHhhhc
Q 022466 61 PIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSL--ETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYG 138 (297)
Q Consensus 61 ~i~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~--evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~g 138 (297)
++.++||+||++. .....+.+.++++||+++++..+. +.+.++..++ . ..++++.||||....
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~-~~~~~v~GNHD~~~~----- 65 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP--H-PHKIVIAGNHDLTLD----- 65 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--C-CeEEEEECCCCCcCC-----
Confidence 5899999999987 122345677889999999986532 2444444332 1 236789999996421
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhcCCeEEEEcCcEEEecCCCCCCCCChHHhhccCCCCCCCCCCcccccccCCCCCCCCC
Q 022466 139 FYDECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEG 218 (297)
Q Consensus 139 f~~e~~~~~~~~~~~~~~~~~~~LPl~a~i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~ 218 (297)
.-+.+++++||.+.+.. +..+.
T Consensus 66 ----------------------------~~~~~ilv~H~~p~~~~----------------------~~~~~-------- 87 (135)
T cd07379 66 ----------------------------PEDTDILVTHGPPYGHL----------------------DLVSS-------- 87 (135)
T ss_pred ----------------------------CCCCEEEEECCCCCcCc----------------------ccccc--------
Confidence 11346999999543210 00000
Q ss_pred CccCCCCCccccCHHHHHHHHHHCCCcEEEEcccccccchh
Q 022466 219 WADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVRHFHFE 259 (297)
Q Consensus 219 ~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~ 259 (297)
....|.+.+.+++++.+.++++.||+-.+.|++
T Consensus 88 --------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 88 --------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred --------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 123566788899999999999999999988876
No 39
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.88 E-value=1.7e-08 Score=79.85 Aligned_cols=117 Identities=26% Similarity=0.362 Sum_probs=85.2
Q ss_pred EEEecCCCCHHHHHHHH--HhCCCCCCCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhhhcCh
Q 022466 63 RICGDVHGQYQDLLRLF--EHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFY 140 (297)
Q Consensus 63 ~vvGDIHG~~~~L~~il--~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~ 140 (297)
+++||+|+......... ........+.+|++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----------
Confidence 47899999999888765 34444556778899999999988777655433334456778999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCeEEEEcCcEEEecCCCCCCCCChHHhhccCCCCCCCCCCcccccccCCCCCCCCCCc
Q 022466 141 DECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWA 220 (297)
Q Consensus 141 ~e~~~~~~~~~~~~~~~~~~~LPl~a~i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~ 220 (297)
++++|..+.+...... +.
T Consensus 70 -------------------------------i~~~H~~~~~~~~~~~---------------------~~---------- 87 (131)
T cd00838 70 -------------------------------ILLTHGPPYDPLDELS---------------------PD---------- 87 (131)
T ss_pred -------------------------------EEEeccCCCCCchhhc---------------------cc----------
Confidence 8899998865321000 00
Q ss_pred cCCCCCccccCHHHHHHHHHHCCCcEEEEcccccccchh
Q 022466 221 DSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVRHFHFE 259 (297)
Q Consensus 221 ~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~ 259 (297)
.......+...+.+.+...++.||+-....+.
T Consensus 88 -------~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 88 -------EDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred -------chhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 00045677888899999999999998876655
No 40
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.71 E-value=3.4e-08 Score=88.40 Aligned_cols=71 Identities=8% Similarity=0.135 Sum_probs=58.0
Q ss_pred CcEEEEecCCCCHHHHHHHHHhCCCCCCCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhh
Q 022466 60 APIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDA 131 (297)
Q Consensus 60 ~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~ 131 (297)
++|.+++|+||++..+.++++.+...+.+.+|++||++++|+..-++..++..+. ..+..+++++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~-~l~~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILG-EAHLPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHH-hcCCceEEEcCCCChH
Confidence 6899999999999999999987755567789999999999976766666665553 2335799999999975
No 41
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.67 E-value=2.4e-07 Score=80.06 Aligned_cols=110 Identities=23% Similarity=0.378 Sum_probs=73.7
Q ss_pred cEEEEecCC-CCHH-----HHHHHHHhCCCCCCCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhH
Q 022466 61 PIRICGDVH-GQYQ-----DLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKIN 134 (297)
Q Consensus 61 ~i~vvGDIH-G~~~-----~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~ 134 (297)
+|.||||.| |.-. .+.++++. .+.+.++.+||+++ .+++.++..++ ..++.++||||...
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~~~-- 66 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---GKIQHVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDENL-- 66 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---CCCCEEEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCccc--
Confidence 478999999 5533 35555543 34577889999987 67777765542 26999999999631
Q ss_pred hhhcChHHHHHHHHHHHHHHHHHHhhcCCeEEEE---cCcEEEecCCCCCCCCChHHhhccCCCCCCCCCCcccccccCC
Q 022466 135 RIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALI---NEKILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSD 211 (297)
Q Consensus 135 ~~~gf~~e~~~~~~~~~~~~~~~~~~~LPl~a~i---~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsd 211 (297)
.+|....+ +.+++++||..-. .|.
T Consensus 67 --------------------------~lp~~~~~~~~g~~i~l~HG~~~~--------------------------~~~- 93 (178)
T cd07394 67 --------------------------NYPETKVITVGQFKIGLIHGHQVV--------------------------PWG- 93 (178)
T ss_pred --------------------------cCCCcEEEEECCEEEEEEECCcCC--------------------------CCC-
Confidence 34554444 3379999994210 000
Q ss_pred CCCCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEccccccc
Q 022466 212 PDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVRHF 256 (297)
Q Consensus 212 p~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~ 256 (297)
..+.+.++.+..+.+.+|.||+-.+.
T Consensus 94 -------------------~~~~~~~~~~~~~~dvii~GHTH~p~ 119 (178)
T cd07394 94 -------------------DPDSLAALQRQLDVDILISGHTHKFE 119 (178)
T ss_pred -------------------CHHHHHHHHHhcCCCEEEECCCCcce
Confidence 12345566777899999999998763
No 42
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.64 E-value=1e-06 Score=75.27 Aligned_cols=65 Identities=22% Similarity=0.237 Sum_probs=46.7
Q ss_pred EEEEecCCCCHHHHHHHHHhCCCCCCCceeeccCccCCCCCc-HHHHHHHHHhhhhCCCcEEEecCCchhhh
Q 022466 62 IRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQS-LETICLLLAYKIRYPDKIHLLRGNHEDAK 132 (297)
Q Consensus 62 i~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s-~evl~ll~~lk~~~p~~v~~lrGNHE~~~ 132 (297)
|.++||+||++..+.. ......+.+.+|+.||++++|... .+.+..+. ..+..++++.||||...
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~----~~~~p~~~v~GNHD~~~ 66 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLL----AIGVPVLAVPGNCDTPE 66 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHH----hcCCCEEEEcCCCCCHH
Confidence 5789999999999877 333334557788999999998763 33333332 23456999999999754
No 43
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=98.63 E-value=2.5e-08 Score=80.96 Aligned_cols=129 Identities=38% Similarity=0.617 Sum_probs=104.0
Q ss_pred hHhhhcChHHHHHHHHHH-HHHH---HHHHhhcCCeEEEEcC-cEEEecCCCCCCC-CChHHhhccCCCC--CCCCCCcc
Q 022466 133 INRIYGFYDECKRRFNVR-LWKI---FTDCFNCLPVAALINE-KILCMHGGLSPEL-ENLDQIRNISRPT--DIPDNGLL 204 (297)
Q Consensus 133 ~~~~~gf~~e~~~~~~~~-~~~~---~~~~~~~LPl~a~i~~-~il~vHgGi~p~~-~~l~~i~~i~r~~--~~~~~~~~ 204 (297)
++..+++.+++...++.. .|.. ..++|+.+|+.+.+++ .++|.|++++|.. ..+++++.+.|.. .....+..
T Consensus 3 l~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~ 82 (155)
T COG0639 3 LTALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHT 82 (155)
T ss_pred hhhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCcccc
Confidence 345567777766666543 4555 9999999999999988 8999999999976 6788888777765 56666777
Q ss_pred cccccCCCCCC-CCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcccccccchhccc
Q 022466 205 CDLLWSDPDAN-IEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVRHFHFEHAD 262 (297)
Q Consensus 205 ~dllWsdp~~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~~~~ 262 (297)
.+.+|+++... ...|.++++|.+..+ .+....|+..+..+.+.++|+....++....
T Consensus 83 ~~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~ 140 (155)
T COG0639 83 HDLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVF 140 (155)
T ss_pred ccccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEe
Confidence 78899999863 688999999998877 7888899988888889999999998888644
No 44
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.56 E-value=8e-07 Score=72.71 Aligned_cols=107 Identities=18% Similarity=0.182 Sum_probs=74.3
Q ss_pred EEEecCCCCHHHHHHHHHhCCCCCCCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhhhcChHH
Q 022466 63 RICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDE 142 (297)
Q Consensus 63 ~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e 142 (297)
.|+||.||..+.+.++... ..+.+.++++||+. .+++..+..+ .+..++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~---~~~~~~~V~GN~D------------- 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTM---LNVPVYYVHGNHD------------- 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHH---cCCCEEEEeCCCc-------------
Confidence 3899999998877776664 45567899999973 3445555544 2335899999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCeEEEEcCcEEEecCCCCCCCCChHHhhccCCCCCCCCCCcccccccCCCCCCCCCCccC
Q 022466 143 CKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADS 222 (297)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~LPl~a~i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~ 222 (297)
-+++++|+-+.+.. +.+.
T Consensus 57 ---------------------------~~Ilv~H~pp~~~~-------------------------~~~~---------- 74 (129)
T cd07403 57 ---------------------------VDILLTHAPPAGIG-------------------------DGED---------- 74 (129)
T ss_pred ---------------------------cCEEEECCCCCcCc-------------------------Cccc----------
Confidence 26999998432100 0000
Q ss_pred CCCCccccCHHHHHHHHHHCCCcEEEEcccccccchh
Q 022466 223 DRGVSCTFGSDVVADFLDKNDLDLICRGHQVRHFHFE 259 (297)
Q Consensus 223 ~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~ 259 (297)
...-|.+.+.+++++.+.+.++.||.-.+..+.
T Consensus 75 ----~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 75 ----FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred ----ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 011255777889999999999999999887765
No 45
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.47 E-value=2.8e-06 Score=69.99 Aligned_cols=118 Identities=21% Similarity=0.230 Sum_probs=75.0
Q ss_pred EEEEecCCCCHH----------HHHHHHHhCCCCCCCceeeccCccCCCCCc-H-HHHHHHHHhhhhCCCcEEEecCCch
Q 022466 62 IRICGDVHGQYQ----------DLLRLFEHGGYPPTANYLFLGDYVDRGKQS-L-ETICLLLAYKIRYPDKIHLLRGNHE 129 (297)
Q Consensus 62 i~vvGDIHG~~~----------~L~~il~~~~~~~~~~~vfLGD~VDrG~~s-~-evl~ll~~lk~~~p~~v~~lrGNHE 129 (297)
|+.++|+|=... .|.++++.....+.+.++++||+++.|... . +...++..++... ..++.++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 467899993211 122344444445567788999999998742 1 2233444433211 37999999999
Q ss_pred hhhhHhhhcChHHHHHHHHHHHHHHHHHHhhcCCeEEEEcCcEEEecCCCCCCCCChHHhhccCCCCCCCCCCccccccc
Q 022466 130 DAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLW 209 (297)
Q Consensus 130 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~LPl~a~i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllW 209 (297)
. ++++|..+.+.-.. |
T Consensus 80 ~-----------------------------------------iv~~Hhp~~~~~~~-----------------------~ 95 (144)
T cd07400 80 V-----------------------------------------IVVLHHPLVPPPGS-----------------------G 95 (144)
T ss_pred E-----------------------------------------EEEecCCCCCCCcc-----------------------c
Confidence 7 78889766542100 0
Q ss_pred CCCCCCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcccccccchhc
Q 022466 210 SDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVRHFHFEH 260 (297)
Q Consensus 210 sdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~~ 260 (297)
... .. +.+.+.+.+++.++++++.||+-.+..+.+
T Consensus 96 ----------~~~-----~~-~~~~~~~~l~~~~~~~~l~GH~H~~~~~~~ 130 (144)
T cd07400 96 ----------RER-----LL-DAGDALKLLAEAGVDLVLHGHKHVPYVGNI 130 (144)
T ss_pred ----------ccc-----CC-CHHHHHHHHHHcCCCEEEECCCCCcCeeec
Confidence 000 01 567788899999999999999988766554
No 46
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.46 E-value=9.9e-07 Score=74.64 Aligned_cols=67 Identities=22% Similarity=0.198 Sum_probs=47.4
Q ss_pred EEEEecCCCCHHHHHHHHH-hCCCCCCCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhh
Q 022466 62 IRICGDVHGQYQDLLRLFE-HGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDA 131 (297)
Q Consensus 62 i~vvGDIHG~~~~L~~il~-~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~ 131 (297)
+.++||+|++.......+. .......+.++++||+++++..+.... ++. ....+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~--~~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLL--ALKGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHH--hhcCCccEEEeCCCcceE
Confidence 4689999999887766552 233344567889999999987665543 221 223456799999999985
No 47
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.32 E-value=2.4e-06 Score=77.00 Aligned_cols=175 Identities=17% Similarity=0.231 Sum_probs=90.3
Q ss_pred CcEEEEecCCCC------HHHHHHHHHhCCCCCCCceeeccCccCC--C-----CCcHHHHHHHHHhhhhCCCcEEEecC
Q 022466 60 APIRICGDVHGQ------YQDLLRLFEHGGYPPTANYLFLGDYVDR--G-----KQSLETICLLLAYKIRYPDKIHLLRG 126 (297)
Q Consensus 60 ~~i~vvGDIHG~------~~~L~~il~~~~~~~~~~~vfLGD~VDr--G-----~~s~evl~ll~~lk~~~p~~v~~lrG 126 (297)
|++++++|+|.. ...+.+.++.. ....+.++++||++|. | +...+++.++..++. .+..++++.|
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~-~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~-~g~~v~~v~G 78 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGE-ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSD-SGVPCYFMHG 78 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhh-hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHH-cCCeEEEEeC
Confidence 689999999954 22455555432 1345678899999985 2 234566777766652 3457999999
Q ss_pred CchhhhhHhhhcChHHHHHHHHHHHHHHHHHHhhcCCeEEEEcC-cEEEecCCCCCCCC-ChHHhhccCC-CC------C
Q 022466 127 NHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINE-KILCMHGGLSPELE-NLDQIRNISR-PT------D 197 (297)
Q Consensus 127 NHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~LPl~a~i~~-~il~vHgGi~p~~~-~l~~i~~i~r-~~------~ 197 (297)
|||..... ...+..+. ..+.. |....+++ +++++||-.-+... ....++++-| |. .
T Consensus 79 NHD~~~~~-------~~~~~~g~-------~~l~~-~~~~~~~g~~i~l~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~ 143 (241)
T PRK05340 79 NRDFLLGK-------RFAKAAGM-------TLLPD-PSVIDLYGQRVLLLHGDTLCTDDKAYQRFRRKVRNPWLQWLFLA 143 (241)
T ss_pred CCchhhhH-------HHHHhCCC-------EEeCC-cEEEEECCEEEEEECCcccccCCHHHHHHHHHHhCHHHHHHHHh
Confidence 99974311 00111110 11111 33333444 59999998765321 1122222222 10 0
Q ss_pred CCCCCcccccc--cCCCCCCCCCCccCCCCC-ccccCHHHHHHHHHHCCCcEEEEccccccc
Q 022466 198 IPDNGLLCDLL--WSDPDANIEGWADSDRGV-SCTFGSDVVADFLDKNDLDLICRGHQVRHF 256 (297)
Q Consensus 198 ~~~~~~~~dll--Wsdp~~~~~~~~~~~rg~-~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~ 256 (297)
.|. ..-.++- |+.-+.. . ..++.. -....++.+.+.+++.+++.+|.||+-.+.
T Consensus 144 ~p~-~~~~~ia~~~~~~s~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~ 200 (241)
T PRK05340 144 LPL-SIRLRIAAKMRAKSKA--A--NQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPA 200 (241)
T ss_pred CCH-HHHHHHHHHHHHHHHH--h--cCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcc
Confidence 000 0000000 0000000 0 000111 123356778888999999999999998763
No 48
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.27 E-value=2.3e-06 Score=76.78 Aligned_cols=177 Identities=15% Similarity=0.133 Sum_probs=88.1
Q ss_pred EEEEecCCCCH------HHHHHHHHhCCCCCCCceeeccCccCCC-----CC--cHHHHHHHHHhhhhCCCcEEEecCCc
Q 022466 62 IRICGDVHGQY------QDLLRLFEHGGYPPTANYLFLGDYVDRG-----KQ--SLETICLLLAYKIRYPDKIHLLRGNH 128 (297)
Q Consensus 62 i~vvGDIHG~~------~~L~~il~~~~~~~~~~~vfLGD~VDrG-----~~--s~evl~ll~~lk~~~p~~v~~lrGNH 128 (297)
+++++|+|... ..+.+.+..... ..+.++++||++|.. +. ..++...+..++. .+..++++.|||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~-~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~-~~~~v~~v~GNH 78 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR-KADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSD-QGVPCYFMHGNR 78 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc-cCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHH-CCCeEEEEcCCC
Confidence 36899999542 234444443322 456788999999952 11 1344555555542 356799999999
Q ss_pred hhhhhHhhhcChHHHHHHHHHHHHHHHHHHhhcCCeEEEE-cCcEEEecCCCCCCCC-ChHHhhccCC-CC------CCC
Q 022466 129 EDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALI-NEKILCMHGGLSPELE-NLDQIRNISR-PT------DIP 199 (297)
Q Consensus 129 E~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~LPl~a~i-~~~il~vHgGi~p~~~-~l~~i~~i~r-~~------~~~ 199 (297)
|...-. ...+..+ ...+.. |....+ +.+++++||-.-..-. ...-.+++-| |. ..|
T Consensus 79 D~~~~~-------~~~~~~g-------i~~l~~-~~~~~~~g~~ill~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~l~ 143 (231)
T TIGR01854 79 DFLIGK-------RFAREAG-------MTLLPD-PSVIDLYGQKVLLMHGDTLCTDDTAYQAFRAKVHQPWLQRLFLHLP 143 (231)
T ss_pred chhhhH-------HHHHHCC-------CEEECC-CEEEEECCEEEEEEcCccccCCCHHHHHHHHHHhCHHHHHHHHhCC
Confidence 974211 0000000 011111 222233 4579999998653111 1111222211 10 000
Q ss_pred --CCCcccccccCCCCCCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcccccccchh
Q 022466 200 --DNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVRHFHFE 259 (297)
Q Consensus 200 --~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~ 259 (297)
....+...+++..... .. .+.-.-....++.+++.++..+++++|.||+-.+.-..
T Consensus 144 ~~~r~~l~~~~~~~s~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~GHtH~~~~~~ 201 (231)
T TIGR01854 144 LAVRVKLARKIRAESRAD-KQ---MKSQDIMDVNPAEVAAVMRRYGVDRLIHGHTHRPAIHP 201 (231)
T ss_pred HHHHHHHHHHHHHHHHHh-cC---CCcchhhCCCHHHHHHHHHHcCCCEEEECCccCcceee
Confidence 0111222233221110 00 00001123356778888999999999999998765443
No 49
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.23 E-value=8.5e-06 Score=70.09 Aligned_cols=118 Identities=18% Similarity=0.197 Sum_probs=80.3
Q ss_pred CcEEEEecCCCCHHHHHHHHHhCCCCCCCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhhhcC
Q 022466 60 APIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGF 139 (297)
Q Consensus 60 ~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf 139 (297)
++|.|++|.||...+..+..+.......+.+|.+||++....... +.. ....+++.++||.|.....
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~~~-----l~~---~~~~~i~~V~GN~D~~~~~----- 68 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTLDA-----LEG---GLAAKLIAVRGNCDGEVDQ----- 68 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccchHH-----hhc---ccccceEEEEccCCCcccc-----
Confidence 689999999999986666666666666778889999997664321 111 0246899999999976422
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcCCeEE--EEc-CcEEEecCCCCCCCCChHHhhccCCCCCCCCCCcccccccCCCCCCC
Q 022466 140 YDECKRRFNVRLWKIFTDCFNCLPVAA--LIN-EKILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANI 216 (297)
Q Consensus 140 ~~e~~~~~~~~~~~~~~~~~~~LPl~a--~i~-~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~ 216 (297)
..+|-.. .++ -+++++||..-..
T Consensus 69 --------------------~~~p~~~~~~~~g~ki~l~HGh~~~~---------------------------------- 94 (172)
T COG0622 69 --------------------EELPEELVLEVGGVKIFLTHGHLYFV---------------------------------- 94 (172)
T ss_pred --------------------ccCChhHeEEECCEEEEEECCCcccc----------------------------------
Confidence 1222222 333 4799999965320
Q ss_pred CCCccCCCCCccccCHHHHHHHHHHCCCcEEEEccccccc
Q 022466 217 EGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVRHF 256 (297)
Q Consensus 217 ~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~ 256 (297)
......++...+..+.+.+|.||+-.+.
T Consensus 95 ------------~~~~~~l~~la~~~~~Dvli~GHTH~p~ 122 (172)
T COG0622 95 ------------KTDLSLLEYLAKELGADVLIFGHTHKPV 122 (172)
T ss_pred ------------ccCHHHHHHHHHhcCCCEEEECCCCccc
Confidence 0123456677778899999999998763
No 50
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.21 E-value=2.7e-06 Score=78.17 Aligned_cols=70 Identities=19% Similarity=0.053 Sum_probs=51.3
Q ss_pred CcEEEEecCCCC----HHHHHHHHHhCCCCCCCceeeccCccCCC--CCcHHHHHHHHHhhhhCCCcEEEecCCchhh
Q 022466 60 APIRICGDVHGQ----YQDLLRLFEHGGYPPTANYLFLGDYVDRG--KQSLETICLLLAYKIRYPDKIHLLRGNHEDA 131 (297)
Q Consensus 60 ~~i~vvGDIHG~----~~~L~~il~~~~~~~~~~~vfLGD~VDrG--~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~ 131 (297)
.+|++++|+|.. ...+.++++.......+-++++||++|++ ....++...|..++.. ..++.+.||||..
T Consensus 50 ~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~--~pv~~V~GNHD~~ 125 (271)
T PRK11340 50 FKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAEC--APTFACFGNHDRP 125 (271)
T ss_pred cEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhc--CCEEEecCCCCcc
Confidence 689999999976 55677777766555667788999999954 2333455666666543 4599999999964
No 51
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.19 E-value=2.8e-06 Score=74.94 Aligned_cols=71 Identities=27% Similarity=0.197 Sum_probs=52.6
Q ss_pred CcEEEEecCCCCHH----HHHHHHHhCCCCCCCceeeccCccCCCCCcH-HHHHHHHHhhhhCCCcEEEecCCchhhh
Q 022466 60 APIRICGDVHGQYQ----DLLRLFEHGGYPPTANYLFLGDYVDRGKQSL-ETICLLLAYKIRYPDKIHLLRGNHEDAK 132 (297)
Q Consensus 60 ~~i~vvGDIHG~~~----~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~-evl~ll~~lk~~~p~~v~~lrGNHE~~~ 132 (297)
.++++++|+|+... .+.++++.+.....+.+++.||++|.+.... ....++..++ .+..++++.||||...
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~--~~~~v~~v~GNHD~~~ 77 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLK--APLGVYAVLGNHDYYS 77 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccC--CCCCEEEECCCccccc
Confidence 58999999998743 6677777665555677889999999987765 4555554432 4467999999999753
No 52
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.13 E-value=5.4e-05 Score=66.06 Aligned_cols=70 Identities=13% Similarity=0.006 Sum_probs=45.0
Q ss_pred CcEEEEecCCCCHH------------HHHHHHHhCCCCCCCceeeccCccCCCCCc---HHHHHHHHHhhhhCCCcEEEe
Q 022466 60 APIRICGDVHGQYQ------------DLLRLFEHGGYPPTANYLFLGDYVDRGKQS---LETICLLLAYKIRYPDKIHLL 124 (297)
Q Consensus 60 ~~i~vvGDIHG~~~------------~L~~il~~~~~~~~~~~vfLGD~VDrG~~s---~evl~ll~~lk~~~p~~v~~l 124 (297)
.++.+++|+|-... .+..+.+.+.....+.+|++||+++.+... .+.+..+++.....+-.++++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 82 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAAT 82 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 47899999995221 122222222333456788999999977653 555555544433345679999
Q ss_pred cCCch
Q 022466 125 RGNHE 129 (297)
Q Consensus 125 rGNHE 129 (297)
.||||
T Consensus 83 ~GNHD 87 (199)
T cd07383 83 FGNHD 87 (199)
T ss_pred CccCC
Confidence 99999
No 53
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.09 E-value=2.8e-05 Score=68.95 Aligned_cols=147 Identities=17% Similarity=0.184 Sum_probs=78.5
Q ss_pred cEEEEecCCCC----HHHH----HHHHHhCCCCCCCceeeccCccCCCCCcH--HHH-HHHHHhhhhCCCcEEEecCCch
Q 022466 61 PIRICGDVHGQ----YQDL----LRLFEHGGYPPTANYLFLGDYVDRGKQSL--ETI-CLLLAYKIRYPDKIHLLRGNHE 129 (297)
Q Consensus 61 ~i~vvGDIHG~----~~~L----~~il~~~~~~~~~~~vfLGD~VDrG~~s~--evl-~ll~~lk~~~p~~v~~lrGNHE 129 (297)
+++++||+|-- ...+ ..+.+.+.....+.+|++||+++.+.... +.+ ..+..++ ..+-.++.++||||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~-~~~~p~~~~~GNHD 80 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLD-KAGIPYSVLAGNHD 80 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHH-HcCCcEEEECCCCc
Confidence 58899999942 2223 33344433334567889999999998433 222 2222222 13456899999999
Q ss_pred hhhhHhhhcChHHHHHHHHHHHHHHHHHHhhcCCeEEEEcCcEEEecCCCCCCCCChHHhhccCCCCCCCCCCccccccc
Q 022466 130 DAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLW 209 (297)
Q Consensus 130 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~LPl~a~i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllW 209 (297)
... ...+.. ..+.++.+.+.++..|- ..-++++|--+.+.-.. .....|
T Consensus 81 ~~~-~ld~~~--------~~~ql~WL~~~L~~~~~----~~~iv~~H~p~~~~~~~------------------~~~~~~ 129 (214)
T cd07399 81 LVL-ALEFGP--------RDEVLQWANEVLKKHPD----RPAILTTHAYLNCDDSR------------------PDSIDY 129 (214)
T ss_pred chh-hCCCCC--------CHHHHHHHHHHHHHCCC----CCEEEEecccccCCCCc------------------Cccccc
Confidence 432 211111 12223334444444331 12377888754431100 000111
Q ss_pred CCCCCCCCCCccCCCCCccccCHHHHHHHHHHC-CCcEEEEccccc
Q 022466 210 SDPDANIEGWADSDRGVSCTFGSDVVADFLDKN-DLDLICRGHQVR 254 (297)
Q Consensus 210 sdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~-g~~~iIrgH~~~ 254 (297)
.. ...-+.+.+.+.++++ ++++++-||.-.
T Consensus 130 ~~---------------~~~~~~~~~~~ll~~~~~V~~v~~GH~H~ 160 (214)
T cd07399 130 DS---------------DVNDGQQIWDKLVKKNDNVFMVLSGHVHG 160 (214)
T ss_pred cc---------------ccccHHHHHHHHHhCCCCEEEEEccccCC
Confidence 10 1123456677888888 799999999764
No 54
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.03 E-value=1e-05 Score=72.82 Aligned_cols=68 Identities=22% Similarity=0.148 Sum_probs=49.3
Q ss_pred cEEEEecCCCCH------HHHHHHHHhCCCCCCCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhh
Q 022466 61 PIRICGDVHGQY------QDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDA 131 (297)
Q Consensus 61 ~i~vvGDIHG~~------~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~ 131 (297)
+|.+++|+|+++ ..+.++++.+...+.+.+|+.||++++.+.+.+.+..+.++ .+..++++.||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 588999999763 23556666555455677889999999876666666555442 345799999999964
No 55
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.90 E-value=2.9e-05 Score=71.05 Aligned_cols=72 Identities=22% Similarity=0.262 Sum_probs=49.1
Q ss_pred cEEEEecCC-CC------------HHHHHHHHHhCCCCCCCceeeccCccCCCCC-cHHHHHHHHHhhhhCCCcEEEecC
Q 022466 61 PIRICGDVH-GQ------------YQDLLRLFEHGGYPPTANYLFLGDYVDRGKQ-SLETICLLLAYKIRYPDKIHLLRG 126 (297)
Q Consensus 61 ~i~vvGDIH-G~------------~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~-s~evl~ll~~lk~~~p~~v~~lrG 126 (297)
|+.+++|+| +. ...+.++++.+.....+.+|++||+++.|.. +.+-+..+.+.-...+-.++.+.|
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~G 81 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLG 81 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecC
Confidence 689999999 22 4566777777654456778899999998873 223333333332233457999999
Q ss_pred Cchhhh
Q 022466 127 NHEDAK 132 (297)
Q Consensus 127 NHE~~~ 132 (297)
|||...
T Consensus 82 NHD~~~ 87 (267)
T cd07396 82 NHDLYN 87 (267)
T ss_pred cccccc
Confidence 999864
No 56
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.89 E-value=2.7e-05 Score=70.94 Aligned_cols=72 Identities=24% Similarity=0.229 Sum_probs=49.3
Q ss_pred CcEEEEecCCC-C-----------HHHHHHHHHhCCCCCCCceeeccCccCCCCCcHHHH----HHHHHhhhhCCCcEEE
Q 022466 60 APIRICGDVHG-Q-----------YQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETI----CLLLAYKIRYPDKIHL 123 (297)
Q Consensus 60 ~~i~vvGDIHG-~-----------~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl----~ll~~lk~~~p~~v~~ 123 (297)
|+++.++|+|- . ...|.++++.+.....+.+++.||++|+...+.+.. .++..++...|-.+++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 57899999993 2 234555665554455677889999999986554433 3444444333357999
Q ss_pred ecCCchhh
Q 022466 124 LRGNHEDA 131 (297)
Q Consensus 124 lrGNHE~~ 131 (297)
+.||||..
T Consensus 81 i~GNHD~~ 88 (253)
T TIGR00619 81 ISGNHDSA 88 (253)
T ss_pred EccCCCCh
Confidence 99999975
No 57
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.80 E-value=4.1e-05 Score=72.73 Aligned_cols=72 Identities=24% Similarity=0.282 Sum_probs=49.4
Q ss_pred CcEEEEecCC-C-----------CHHHHHHHHHhCCCCCCCceeeccCccCCC-CCcHHHHHHHHH----hhhhCCCcEE
Q 022466 60 APIRICGDVH-G-----------QYQDLLRLFEHGGYPPTANYLFLGDYVDRG-KQSLETICLLLA----YKIRYPDKIH 122 (297)
Q Consensus 60 ~~i~vvGDIH-G-----------~~~~L~~il~~~~~~~~~~~vfLGD~VDrG-~~s~evl~ll~~----lk~~~p~~v~ 122 (297)
|+++.++|+| | ....|.++++.+.....+.+|+.||++|+. +.+.+++.++.. .-...+-.++
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 6899999999 4 234556666665555667888999999985 445555444432 1122456799
Q ss_pred EecCCchhh
Q 022466 123 LLRGNHEDA 131 (297)
Q Consensus 123 ~lrGNHE~~ 131 (297)
+|.||||..
T Consensus 81 ~I~GNHD~~ 89 (340)
T PHA02546 81 VLVGNHDMY 89 (340)
T ss_pred EEccCCCcc
Confidence 999999974
No 58
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=97.73 E-value=9.1e-05 Score=66.00 Aligned_cols=69 Identities=25% Similarity=0.268 Sum_probs=46.0
Q ss_pred cEEEEecCCCC------------HHHHHHHHHhCCCC--CCCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecC
Q 022466 61 PIRICGDVHGQ------------YQDLLRLFEHGGYP--PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRG 126 (297)
Q Consensus 61 ~i~vvGDIHG~------------~~~L~~il~~~~~~--~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrG 126 (297)
|+++++|+|=. ...+.++++.+... +.+-+|++||+++.|... ....+.+.....+-.++.++|
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~--~~~~~~~~l~~~~~p~~~v~G 78 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPE--SYERLRELLAALPIPVYLLPG 78 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHH--HHHHHHHHHhhcCCCEEEeCC
Confidence 58899999944 34577777765443 556788999999987532 122222222223557999999
Q ss_pred Cchhh
Q 022466 127 NHEDA 131 (297)
Q Consensus 127 NHE~~ 131 (297)
|||..
T Consensus 79 NHD~~ 83 (240)
T cd07402 79 NHDDR 83 (240)
T ss_pred CCCCH
Confidence 99974
No 59
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.68 E-value=0.0001 Score=67.61 Aligned_cols=70 Identities=19% Similarity=0.301 Sum_probs=46.0
Q ss_pred EEEEecCCCCHHHHHHHHHh---CCCCCCCceeeccCccCCCCC-cHHHH-------------HHHHHhhhhCCCcEEEe
Q 022466 62 IRICGDVHGQYQDLLRLFEH---GGYPPTANYLFLGDYVDRGKQ-SLETI-------------CLLLAYKIRYPDKIHLL 124 (297)
Q Consensus 62 i~vvGDIHG~~~~L~~il~~---~~~~~~~~~vfLGD~VDrG~~-s~evl-------------~ll~~lk~~~p~~v~~l 124 (297)
|+|+||+||+++.+.+.++. ....+.+-+|++||+-..+.. ..+.+ .++.. ....|-.+++|
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g-~~~~p~~t~fi 79 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSG-EKKAPILTIFI 79 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcC-CccCCeeEEEE
Confidence 68999999999999775443 233456778899999754433 22222 11111 22356678999
Q ss_pred cCCchhhh
Q 022466 125 RGNHEDAK 132 (297)
Q Consensus 125 rGNHE~~~ 132 (297)
.||||...
T Consensus 80 ~GNHE~~~ 87 (262)
T cd00844 80 GGNHEASN 87 (262)
T ss_pred CCCCCCHH
Confidence 99999753
No 60
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.68 E-value=0.00011 Score=62.70 Aligned_cols=58 Identities=19% Similarity=0.118 Sum_probs=34.7
Q ss_pred HHHHHHhCCCCCCCceeeccCccCCCCCcH-HHHHHH-HHhhhhCCCcEEEecCCchhhh
Q 022466 75 LLRLFEHGGYPPTANYLFLGDYVDRGKQSL-ETICLL-LAYKIRYPDKIHLLRGNHEDAK 132 (297)
Q Consensus 75 L~~il~~~~~~~~~~~vfLGD~VDrG~~s~-evl~ll-~~lk~~~p~~v~~lrGNHE~~~ 132 (297)
+.++.+.+...+.+.+|++||+++....+. +....+ .......+..+++++||||...
T Consensus 30 ~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 30 LERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGGL 89 (172)
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccch
Confidence 344444444445678999999998654322 212111 1112234568999999999754
No 61
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.62 E-value=0.00011 Score=65.89 Aligned_cols=172 Identities=19% Similarity=0.230 Sum_probs=90.5
Q ss_pred EEecCCCC------HHHHHHHHHhCCCCCCCceeeccCccCC--CCC-----cHHHHHHHHHhhhhCCCcEEEecCCchh
Q 022466 64 ICGDVHGQ------YQDLLRLFEHGGYPPTANYLFLGDYVDR--GKQ-----SLETICLLLAYKIRYPDKIHLLRGNHED 130 (297)
Q Consensus 64 vvGDIHG~------~~~L~~il~~~~~~~~~~~vfLGD~VDr--G~~-----s~evl~ll~~lk~~~p~~v~~lrGNHE~ 130 (297)
.|+|+|=. .+.|.+.|+...- ..+.+.++||++|- |.+ -.+|...|..+ .+.+.+++++.||||.
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a~-~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~-a~~G~~v~~i~GN~Df 79 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEAA-QADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRL-ARKGTRVYYIHGNHDF 79 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhccc-cCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHH-HhcCCeEEEecCchHH
Confidence 68999933 3344455554332 45678889999962 322 23344444333 3467899999999995
Q ss_pred hhhHhhhcChHHHHHHHHHHHHHHHHHHhhcCCeEEEE---cCcEEEecCCCCCCCC-C-----------hHHhhccCCC
Q 022466 131 AKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALI---NEKILCMHGGLSPELE-N-----------LDQIRNISRP 195 (297)
Q Consensus 131 ~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~LPl~a~i---~~~il~vHgGi~p~~~-~-----------l~~i~~i~r~ 195 (297)
.. ...+ +.. ..-+.-+|-...+ +.+++.+||..-.... . +.+..-+..|
T Consensus 80 ll-~~~f----------~~~-----~g~~~l~~~~~~~~l~g~~~Ll~HGD~f~t~~~~y~~~r~~~~~~~~~~lflnl~ 143 (237)
T COG2908 80 LL-GKRF----------AQE-----AGGMTLLPDPIVLDLYGKRILLAHGDTFCTDDRAYQWFRYKVHWAWLQLLFLNLP 143 (237)
T ss_pred HH-HHHH----------Hhh-----cCceEEcCcceeeeecCcEEEEEeCCcccchHHHHHHHHHHcccHHHHHHHHHhH
Confidence 43 2111 100 0112344544444 5689999997642110 0 1111111111
Q ss_pred CCCCCCCcccccccCCCCCCCCCCccCCCCCc---cccCHHHHHHHHHHCCCcEEEEcccccccchhc
Q 022466 196 TDIPDNGLLCDLLWSDPDANIEGWADSDRGVS---CTFGSDVVADFLDKNDLDLICRGHQVRHFHFEH 260 (297)
Q Consensus 196 ~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~---~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~~ 260 (297)
+. -.-.+..-+|+.. .|...+.... ....++++.+-++++|++.+|.||+-.+..-..
T Consensus 144 l~--~R~ri~~k~r~~s-----~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i 204 (237)
T COG2908 144 LR--VRRRIAYKIRSLS-----SWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHNI 204 (237)
T ss_pred HH--HHHHHHHHHHHhh-----HHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhccC
Confidence 10 0001112245433 2333222211 234677788889999999999999988765443
No 62
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.61 E-value=0.0002 Score=62.85 Aligned_cols=69 Identities=23% Similarity=0.273 Sum_probs=38.9
Q ss_pred EEEecCC---CCHHH---HHHHHHhCCCCCCCceeeccCccCCC--C-----C-cHHHHHHHHHhhhhCCCcEEEecCCc
Q 022466 63 RICGDVH---GQYQD---LLRLFEHGGYPPTANYLFLGDYVDRG--K-----Q-SLETICLLLAYKIRYPDKIHLLRGNH 128 (297)
Q Consensus 63 ~vvGDIH---G~~~~---L~~il~~~~~~~~~~~vfLGD~VDrG--~-----~-s~evl~ll~~lk~~~p~~v~~lrGNH 128 (297)
++|+|+| +...+ +...++.......+.+|++||++|.- . . ..+.+..+..+. ..+..++.+.|||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~~v~GNH 79 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLA-DRGTRVYYVPGNH 79 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHH-HCCCeEEEECCCc
Confidence 4799999 22111 22222221113567899999999841 1 1 122223333322 3566899999999
Q ss_pred hhhh
Q 022466 129 EDAK 132 (297)
Q Consensus 129 E~~~ 132 (297)
|...
T Consensus 80 D~~~ 83 (217)
T cd07398 80 DFLL 83 (217)
T ss_pred hHHH
Confidence 9754
No 63
>PRK04036 DNA polymerase II small subunit; Validated
Probab=97.60 E-value=0.00012 Score=73.21 Aligned_cols=114 Identities=19% Similarity=0.228 Sum_probs=60.9
Q ss_pred cCcEEEEecCC-CCH----HHHHHHHHhCC-C--------CCCCceeeccCccCC-CCCc---------------HHHHH
Q 022466 59 EAPIRICGDVH-GQY----QDLLRLFEHGG-Y--------PPTANYLFLGDYVDR-GKQS---------------LETIC 108 (297)
Q Consensus 59 ~~~i~vvGDIH-G~~----~~L~~il~~~~-~--------~~~~~~vfLGD~VDr-G~~s---------------~evl~ 108 (297)
+.++++++|+| |.- ..+..+++.+. . ...+.+|++||++|. |..+ .++..
T Consensus 243 ~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~ 322 (504)
T PRK04036 243 KVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAE 322 (504)
T ss_pred ccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHH
Confidence 35799999999 652 22333333322 1 223578899999994 3221 13444
Q ss_pred HHHHhhhhCCCcEEEecCCchhhhhHhhh-cChHHHHHHHHHHHHHHHHHHhhcCCeEEEEcC-cEEEecCCC
Q 022466 109 LLLAYKIRYPDKIHLLRGNHEDAKINRIY-GFYDECKRRFNVRLWKIFTDCFNCLPVAALINE-KILCMHGGL 179 (297)
Q Consensus 109 ll~~lk~~~p~~v~~lrGNHE~~~~~~~~-gf~~e~~~~~~~~~~~~~~~~~~~LPl~a~i~~-~il~vHgGi 179 (297)
+|.++. ..-.+++++||||........ .+.......+. ..-..++.. |....+++ +++++||-.
T Consensus 323 ~L~~L~--~~i~V~~ipGNHD~~~~~lPQ~~l~~~l~~~l~----~~~v~~lsN-P~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 323 YLKQIP--EDIKIIISPGNHDAVRQAEPQPAFPEEIRSLFP----EHNVTFVSN-PALVNLHGVDVLIYHGRS 388 (504)
T ss_pred HHHhhh--cCCeEEEecCCCcchhhccCCCCccHHHHHhcC----cCCeEEecC-CeEEEECCEEEEEECCCC
Confidence 444442 345799999999976432211 12111111110 011233444 65555554 689999964
No 64
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=97.60 E-value=1.5e-05 Score=77.44 Aligned_cols=216 Identities=14% Similarity=-0.011 Sum_probs=145.2
Q ss_pred ccCCHHHHHHHHHHHHHHHhhCCCeeeecC-c---EEEEecCCCCHHHHHHHHHhCCCCCC-CceeeccCccCCCCCcHH
Q 022466 31 VQLSESEIRQLCVNARQIFLSQPNLVEVEA-P---IRICGDVHGQYQDLLRLFEHGGYPPT-ANYLFLGDYVDRGKQSLE 105 (297)
Q Consensus 31 ~~~~~~~~~~l~~~~~~il~~ep~~l~~~~-~---i~vvGDIHG~~~~L~~il~~~~~~~~-~~~vfLGD~VDrG~~s~e 105 (297)
..|...++..+++.+.+++..+||...+.. | .+.++|.||.+.|+.++++.- |.. .-|++-|++++++....+
T Consensus 13 ~~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~~~~ 90 (476)
T KOG0376|consen 13 EALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGEFKK 90 (476)
T ss_pred hhcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHHHHH
Confidence 356667888999999999999998888753 3 789999999999999988764 333 348999999999999999
Q ss_pred HHHHHHHhhhhCCCcEEEecCCchhhhhHhhhcChHHHHHHHHH---HHHHHHHHHhhcCC-eEEEEcCcEEEecCCCCC
Q 022466 106 TICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNV---RLWKIFTDCFNCLP-VAALINEKILCMHGGLSP 181 (297)
Q Consensus 106 vl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~---~~~~~~~~~~~~LP-l~a~i~~~il~vHgGi~p 181 (297)
.+..+...+...|++..+.|++||+..+-..++|..+....++. .+...+.. ..++ ++....+.+ .-+.-++-
T Consensus 91 A~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~~s~~~~~~~~--~~~~~i~~~y~g~~-le~~kvt~ 167 (476)
T KOG0376|consen 91 ALLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDKKSVVEMKIDE--EDMDLIESDYSGPV-LEDHKVTL 167 (476)
T ss_pred HHHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCCcccccccccc--ccccccccccCCcc-cccchhhH
Confidence 99999999999999999999999999888877777655444421 11211111 1111 333333211 11111100
Q ss_pred C--------------C-----CC-hHHh----hccCCCCCCCCCCcccccccCCCCCCCCCCccCCCCCccccCHHHHHH
Q 022466 182 E--------------L-----EN-LDQI----RNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVAD 237 (297)
Q Consensus 182 ~--------------~-----~~-l~~i----~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fg~~~~~~ 237 (297)
. + -+ +++. +.++.+.+.. ...+..|+++......+....++.+...+++....
T Consensus 168 e~vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~---~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ 244 (476)
T KOG0376|consen 168 EFVKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEIS---VPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNP 244 (476)
T ss_pred HHHHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEee---cCCCceEEecCCccccccchhhhHhhcCCCCCccc
Confidence 0 0 00 1111 1111122222 44677899888665567777777777777888888
Q ss_pred HHHHCCCcEEEEccccc
Q 022466 238 FLDKNDLDLICRGHQVR 254 (297)
Q Consensus 238 fl~~~g~~~iIrgH~~~ 254 (297)
|+...+..-+.+.|.-+
T Consensus 245 ylfngdfv~rgs~s~e~ 261 (476)
T KOG0376|consen 245 YLFNGDFVDRGSWSVEV 261 (476)
T ss_pred ccccCceeeecccceee
Confidence 88888887777777543
No 65
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.57 E-value=0.00012 Score=64.06 Aligned_cols=73 Identities=22% Similarity=0.243 Sum_probs=48.9
Q ss_pred cEEEEecCC-CCH--------------HHHHHHHHhCCCCCCCceeeccCccCCCCCcHHHHHHHHHhhhh---CCCcEE
Q 022466 61 PIRICGDVH-GQY--------------QDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIR---YPDKIH 122 (297)
Q Consensus 61 ~i~vvGDIH-G~~--------------~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~---~p~~v~ 122 (297)
+++.++|+| |.. ..|.++++.+.....+.+|+.||++|....+.+.+..+...-.. .+-.++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 578999999 322 23666666655555667889999999886555443333322222 255799
Q ss_pred EecCCchhhhh
Q 022466 123 LLRGNHEDAKI 133 (297)
Q Consensus 123 ~lrGNHE~~~~ 133 (297)
++.||||....
T Consensus 81 ~~~GNHD~~~~ 91 (223)
T cd00840 81 IIAGNHDSPSR 91 (223)
T ss_pred EecCCCCCccc
Confidence 99999997653
No 66
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=97.55 E-value=0.00018 Score=66.14 Aligned_cols=71 Identities=15% Similarity=0.048 Sum_probs=47.7
Q ss_pred cCcEEEEecCC-C-----------CHHHHHHHHHhCCC--CCCCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEe
Q 022466 59 EAPIRICGDVH-G-----------QYQDLLRLFEHGGY--PPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLL 124 (297)
Q Consensus 59 ~~~i~vvGDIH-G-----------~~~~L~~il~~~~~--~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~l 124 (297)
+.+++.++|+| . ....|.++++.+.. ++.+-+|+.||+++.|. .+-+..+.+.-...+..++.+
T Consensus 14 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~v 91 (275)
T PRK11148 14 RVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVWL 91 (275)
T ss_pred CEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEEe
Confidence 36899999999 1 24667777776532 23467889999999874 222333333222345679999
Q ss_pred cCCchhh
Q 022466 125 RGNHEDA 131 (297)
Q Consensus 125 rGNHE~~ 131 (297)
.||||..
T Consensus 92 ~GNHD~~ 98 (275)
T PRK11148 92 PGNHDFQ 98 (275)
T ss_pred CCCCCCh
Confidence 9999974
No 67
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.52 E-value=0.00019 Score=69.83 Aligned_cols=72 Identities=22% Similarity=0.291 Sum_probs=47.1
Q ss_pred CcEEEEecCC-CC-H------HH----HHHHHHhCCCCCCCceeeccCccCCCCCcHHHH----HHHHHhhhhCCCcEEE
Q 022466 60 APIRICGDVH-GQ-Y------QD----LLRLFEHGGYPPTANYLFLGDYVDRGKQSLETI----CLLLAYKIRYPDKIHL 123 (297)
Q Consensus 60 ~~i~vvGDIH-G~-~------~~----L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl----~ll~~lk~~~p~~v~~ 123 (297)
++++.++|+| |. + .+ |.++.+.+.....+.+|+.||++|++..+.+.. .++..++. .+-.+++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~-~~~~v~~ 79 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQ-TGCQLVV 79 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHh-cCCcEEE
Confidence 5789999999 42 1 11 334444444456678889999999986554332 33334432 3456999
Q ss_pred ecCCchhhh
Q 022466 124 LRGNHEDAK 132 (297)
Q Consensus 124 lrGNHE~~~ 132 (297)
+.||||...
T Consensus 80 I~GNHD~~~ 88 (407)
T PRK10966 80 LAGNHDSVA 88 (407)
T ss_pred EcCCCCChh
Confidence 999999753
No 68
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.45 E-value=0.00023 Score=60.62 Aligned_cols=67 Identities=27% Similarity=0.380 Sum_probs=43.3
Q ss_pred EEEEecCCCCHHHH---------------HHHHHhCC--CCCCCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEe
Q 022466 62 IRICGDVHGQYQDL---------------LRLFEHGG--YPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLL 124 (297)
Q Consensus 62 i~vvGDIHG~~~~L---------------~~il~~~~--~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~l 124 (297)
+++++|+|=..... .++++... ..+.+.++++||+++++..+.. +..+.++ +..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~~----~~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSRL----NGRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHhC----CCCeEEE
Confidence 47889999444322 12233221 2345788999999999986644 4444333 4579999
Q ss_pred cCCchhhhh
Q 022466 125 RGNHEDAKI 133 (297)
Q Consensus 125 rGNHE~~~~ 133 (297)
+||||....
T Consensus 76 ~GNHD~~~~ 84 (168)
T cd07390 76 KGNHDSSLE 84 (168)
T ss_pred eCCCCchhh
Confidence 999997643
No 69
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.40 E-value=0.00041 Score=62.22 Aligned_cols=69 Identities=17% Similarity=0.171 Sum_probs=43.8
Q ss_pred CcEEEEecCC-CCHHH----------------HHHHHHhCCCCCCCceeeccCccCCCCCc---HHHHHHHHHhhhhCCC
Q 022466 60 APIRICGDVH-GQYQD----------------LLRLFEHGGYPPTANYLFLGDYVDRGKQS---LETICLLLAYKIRYPD 119 (297)
Q Consensus 60 ~~i~vvGDIH-G~~~~----------------L~~il~~~~~~~~~~~vfLGD~VDrG~~s---~evl~ll~~lk~~~p~ 119 (297)
.++.||+|+| |--.. |.++.+.......+.+|++||+.+..... .++..++..+ ..
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~----~~ 90 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVT----FR 90 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhc----CC
Confidence 5789999999 54332 22333333334457899999999765542 2333333332 34
Q ss_pred cEEEecCCchhhh
Q 022466 120 KIHLLRGNHEDAK 132 (297)
Q Consensus 120 ~v~~lrGNHE~~~ 132 (297)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 8999999999754
No 70
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=97.38 E-value=0.0062 Score=54.21 Aligned_cols=182 Identities=18% Similarity=0.185 Sum_probs=103.6
Q ss_pred cCcEEEEecCCCCHHHHHHHHHhCCCCCCCceeeccCcc--CCCCCcHHHHHH-HHHhhhhCCCcEEEecCCchhhhhHh
Q 022466 59 EAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYV--DRGKQSLETICL-LLAYKIRYPDKIHLLRGNHEDAKINR 135 (297)
Q Consensus 59 ~~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~V--DrG~~s~evl~l-l~~lk~~~p~~v~~lrGNHE~~~~~~ 135 (297)
++++..+.|+||..+.+.++++.+.....+-+++.||+. +.|+.-...-.. +..++ ...-.++.++||.|...+-.
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~~~e~l~-~~~~~v~avpGNcD~~~v~~ 81 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELNKLEALK-ELGIPVLAVPGNCDPPEVID 81 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhhHHHHHH-hcCCeEEEEcCCCChHHHHH
Confidence 478999999999999999999998877778888999999 888753322221 33333 24568999999998875432
Q ss_pred hhcChHHHHHHHHHHHHHHHHHHhhcCCeEEEEcCcEEEecCCCCCCC-C-----ChHHhhccCCCC-CCCCCCcc-ccc
Q 022466 136 IYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPEL-E-----NLDQIRNISRPT-DIPDNGLL-CDL 207 (297)
Q Consensus 136 ~~gf~~e~~~~~~~~~~~~~~~~~~~LPl~a~i~~~il~vHgGi~p~~-~-----~l~~i~~i~r~~-~~~~~~~~-~dl 207 (297)
.. ...+..+ .+-...+++-.+|-=||..|.- . +-++|....+.. +... ... --+
T Consensus 82 ~l-------~~~~~~v----------~~~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~-~~~~Il~ 143 (226)
T COG2129 82 VL-------KNAGVNV----------HGRVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKAD-NPVNILL 143 (226)
T ss_pred HH-------Hhccccc----------ccceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhccc-CcceEEE
Confidence 11 1111111 1122233432333346665422 1 234443321111 0000 000 001
Q ss_pred ccCCCCCCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcccccccchhcccc
Q 022466 208 LWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVRHFHFEHADY 263 (297)
Q Consensus 208 lWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~~~~~ 263 (297)
+-+-|... ...++-| -..-|..+++++.++.+-.+.+.||=-...|..--.+
T Consensus 144 ~HaPP~gt---~~d~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~iG~ 195 (226)
T COG2129 144 THAPPYGT---LLDTPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKIGN 195 (226)
T ss_pred ecCCCCCc---cccCCCC-ccccchHHHHHHHHHhCCceEEEeeecccccccccCC
Confidence 11111111 0001222 1345899999999999999999999877788775543
No 71
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.37 E-value=0.00024 Score=60.02 Aligned_cols=47 Identities=28% Similarity=0.293 Sum_probs=29.4
Q ss_pred CCCCceeeccCccCCCCCc-HHHH-HHHHHhhhh---C-CCcEEEecCCchhh
Q 022466 85 PPTANYLFLGDYVDRGKQS-LETI-CLLLAYKIR---Y-PDKIHLLRGNHEDA 131 (297)
Q Consensus 85 ~~~~~~vfLGD~VDrG~~s-~evl-~ll~~lk~~---~-p~~v~~lrGNHE~~ 131 (297)
...+.+|++||++|.+... .+.. ..+..++.. . +-.++++.||||..
T Consensus 37 ~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 37 LQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred cCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 3456788999999987642 2222 222222221 1 35799999999974
No 72
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.33 E-value=0.00053 Score=66.67 Aligned_cols=73 Identities=18% Similarity=0.217 Sum_probs=56.3
Q ss_pred CcEEEEecCCCC------------HHHHHHHHHhCCCCCCCceeeccCccCCCCCcHHHHHHHHHhhhh-----------
Q 022466 60 APIRICGDVHGQ------------YQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIR----------- 116 (297)
Q Consensus 60 ~~i~vvGDIHG~------------~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~----------- 116 (297)
+||.+++|+|-- +..|.++++.+.....+-+|+.||++|+..-|.+++..++.+-.+
T Consensus 4 mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~~~ 83 (405)
T TIGR00583 4 IRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPCELE 83 (405)
T ss_pred eEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCccchh
Confidence 689999999932 557788888887666788889999999999888887554433221
Q ss_pred -------------------------CCCcEEEecCCchhhh
Q 022466 117 -------------------------YPDKIHLLRGNHEDAK 132 (297)
Q Consensus 117 -------------------------~p~~v~~lrGNHE~~~ 132 (297)
..-.|+.|-||||...
T Consensus 84 ~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 84 FLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred hccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 2347999999999864
No 73
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=97.32 E-value=0.00044 Score=61.99 Aligned_cols=67 Identities=25% Similarity=0.232 Sum_probs=39.7
Q ss_pred EEEEecCCCC---------H-----HHHHHHHHhCC--CCCCCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEec
Q 022466 62 IRICGDVHGQ---------Y-----QDLLRLFEHGG--YPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLR 125 (297)
Q Consensus 62 i~vvGDIHG~---------~-----~~L~~il~~~~--~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lr 125 (297)
|++++|||-. + +-+.++.+... .++.+-+|+.||++++++.. +....+..++. .+..++++.
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~-~~~~~l~~l~~-l~~~v~~V~ 78 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLE-EAKLDLAWIDA-LPGTKVLLK 78 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChH-HHHHHHHHHHh-CCCCeEEEe
Confidence 5789999955 1 22223333211 13566788999999887643 22222222332 234589999
Q ss_pred CCchh
Q 022466 126 GNHED 130 (297)
Q Consensus 126 GNHE~ 130 (297)
||||.
T Consensus 79 GNHD~ 83 (232)
T cd07393 79 GNHDY 83 (232)
T ss_pred CCccc
Confidence 99997
No 74
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=97.28 E-value=0.00088 Score=60.78 Aligned_cols=75 Identities=21% Similarity=0.276 Sum_probs=52.9
Q ss_pred CcEEEEecCCCC------HHHHHHHHHhCCCCCCCceeeccCccCCCCC-cHHHHHHHHHhhhhCCCcEEEecCCchhhh
Q 022466 60 APIRICGDVHGQ------YQDLLRLFEHGGYPPTANYLFLGDYVDRGKQ-SLETICLLLAYKIRYPDKIHLLRGNHEDAK 132 (297)
Q Consensus 60 ~~i~vvGDIHG~------~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~-s~evl~ll~~lk~~~p~~v~~lrGNHE~~~ 132 (297)
++++.|+|+|-. ...+.++++.+...+.+.+|+.||+.+.|.. +.+-+..++. +...+..+++++||||...
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~~~~~~~~~~~l~-~~~~~~~~~~vpGNHD~~~ 79 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGEPEEYRRLKELLA-RLELPAPVIVVPGNHDARV 79 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCCHHHHHHHHHHHh-hccCCCceEeeCCCCcCCc
Confidence 478999999976 3455666777776666889999999999632 2222222222 2356788999999999886
Q ss_pred hHh
Q 022466 133 INR 135 (297)
Q Consensus 133 ~~~ 135 (297)
...
T Consensus 80 ~~~ 82 (301)
T COG1409 80 VNG 82 (301)
T ss_pred hHH
Confidence 553
No 75
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.09 E-value=0.0011 Score=60.31 Aligned_cols=70 Identities=19% Similarity=0.061 Sum_probs=42.2
Q ss_pred EEEEecCCCCHH------HH-HHHHHhCCCCCCCceeeccCccCCCCCc--------H---HHHHHHHHhhhhCCCcEEE
Q 022466 62 IRICGDVHGQYQ------DL-LRLFEHGGYPPTANYLFLGDYVDRGKQS--------L---ETICLLLAYKIRYPDKIHL 123 (297)
Q Consensus 62 i~vvGDIHG~~~------~L-~~il~~~~~~~~~~~vfLGD~VDrG~~s--------~---evl~ll~~lk~~~p~~v~~ 123 (297)
++.++|+|-... .. ..+++.+.....+.+|++||++|+.... . +.+..+..+....+..++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 567899995221 12 3344444444566788999999986521 1 1222222222223578999
Q ss_pred ecCCchhh
Q 022466 124 LRGNHEDA 131 (297)
Q Consensus 124 lrGNHE~~ 131 (297)
++||||..
T Consensus 82 v~GNHD~~ 89 (256)
T cd07401 82 IRGNHDLF 89 (256)
T ss_pred eCCCCCcC
Confidence 99999985
No 76
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=97.01 E-value=0.0013 Score=63.35 Aligned_cols=73 Identities=22% Similarity=0.200 Sum_probs=53.0
Q ss_pred CcEEEEecCCCC-------------HHHHHHHHHhCCCCCCCceeeccCccCCCCCcHHHHHHHHHhhhh---CCCcEEE
Q 022466 60 APIRICGDVHGQ-------------YQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIR---YPDKIHL 123 (297)
Q Consensus 60 ~~i~vvGDIHG~-------------~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~---~p~~v~~ 123 (297)
+|+..++|.|=- +.+|..+++.+.-...+-+|.-||+.|+..-|.+++..+...-.. ..-.+++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 578889999933 345556666665556677889999999998887776655443332 2357999
Q ss_pred ecCCchhhh
Q 022466 124 LRGNHEDAK 132 (297)
Q Consensus 124 lrGNHE~~~ 132 (297)
|.||||...
T Consensus 81 I~GNHD~~~ 89 (390)
T COG0420 81 IAGNHDSPS 89 (390)
T ss_pred ecCCCCchh
Confidence 999999875
No 77
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=97.00 E-value=0.0019 Score=58.57 Aligned_cols=71 Identities=11% Similarity=-0.033 Sum_probs=43.7
Q ss_pred cEEEEecCCCCH----------------HHHHHHHHhCCCC--CCCceeeccCccCCCCCcH---HHHHHHHH-hhh-hC
Q 022466 61 PIRICGDVHGQY----------------QDLLRLFEHGGYP--PTANYLFLGDYVDRGKQSL---ETICLLLA-YKI-RY 117 (297)
Q Consensus 61 ~i~vvGDIHG~~----------------~~L~~il~~~~~~--~~~~~vfLGD~VDrG~~s~---evl~ll~~-lk~-~~ 117 (297)
+++++||+|-.. ..|+++++.+... ..+-++++||+++.|.... +....+.+ ++. ..
T Consensus 6 ~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (262)
T cd07395 6 YFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLDP 85 (262)
T ss_pred EEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhccC
Confidence 578889998553 2355666665432 4456778999999887541 11122111 221 12
Q ss_pred CCcEEEecCCchhh
Q 022466 118 PDKIHLLRGNHEDA 131 (297)
Q Consensus 118 p~~v~~lrGNHE~~ 131 (297)
+-.++.+.||||..
T Consensus 86 ~vp~~~i~GNHD~~ 99 (262)
T cd07395 86 DIPLVCVCGNHDVG 99 (262)
T ss_pred CCcEEEeCCCCCCC
Confidence 45699999999974
No 78
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=96.85 E-value=0.0018 Score=58.31 Aligned_cols=68 Identities=22% Similarity=0.231 Sum_probs=39.0
Q ss_pred EEEecCC--CCH---HHHHHHHHhC-CCC----CCCceeeccCccCCCCC------------c----HHHHHHHHHhhhh
Q 022466 63 RICGDVH--GQY---QDLLRLFEHG-GYP----PTANYLFLGDYVDRGKQ------------S----LETICLLLAYKIR 116 (297)
Q Consensus 63 ~vvGDIH--G~~---~~L~~il~~~-~~~----~~~~~vfLGD~VDrG~~------------s----~evl~ll~~lk~~ 116 (297)
++|+|+| +.. ..+..+++.+ +.. ..+.+|++||++|+... . .++..++.++.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~-- 79 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVP-- 79 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcc--
Confidence 6799999 331 2223333322 221 23678899999997310 0 12233333332
Q ss_pred CCCcEEEecCCchhhh
Q 022466 117 YPDKIHLLRGNHEDAK 132 (297)
Q Consensus 117 ~p~~v~~lrGNHE~~~ 132 (297)
..-.|+++.||||...
T Consensus 80 ~~~~v~~ipGNHD~~~ 95 (243)
T cd07386 80 SHIKIIIIPGNHDAVR 95 (243)
T ss_pred cCCeEEEeCCCCCccc
Confidence 3457999999999753
No 79
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=96.77 E-value=0.0014 Score=60.30 Aligned_cols=69 Identities=16% Similarity=0.098 Sum_probs=40.4
Q ss_pred CcEEEEecCCC----CHHHHHHHHHhCCCCCCCceeeccCccCCCCCc----H-HHHHHHHHhhhhCCCcEEEecCCchh
Q 022466 60 APIRICGDVHG----QYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQS----L-ETICLLLAYKIRYPDKIHLLRGNHED 130 (297)
Q Consensus 60 ~~i~vvGDIHG----~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s----~-evl~ll~~lk~~~p~~v~~lrGNHE~ 130 (297)
-+++|+||.|. ....+.++.+. ....+-+|++||+++-+... . ..+..+..+. ..-.++.++||||.
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD~ 80 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLA--SYVPYMVTPGNHEA 80 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHH--hcCCcEEcCccccc
Confidence 47899999995 23333333332 23445678899999544322 1 1222222221 23468999999998
Q ss_pred hh
Q 022466 131 AK 132 (297)
Q Consensus 131 ~~ 132 (297)
..
T Consensus 81 ~~ 82 (294)
T cd00839 81 DY 82 (294)
T ss_pred cc
Confidence 64
No 80
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=96.68 E-value=0.0033 Score=58.38 Aligned_cols=71 Identities=23% Similarity=0.184 Sum_probs=48.5
Q ss_pred CcEEEEecCCCCHHH--HHHHHHhCCCCCCCceeeccCccCC-CC-CcHHHHHHHHHhhhhCCCcEEEecCCchhhh
Q 022466 60 APIRICGDVHGQYQD--LLRLFEHGGYPPTANYLFLGDYVDR-GK-QSLETICLLLAYKIRYPDKIHLLRGNHEDAK 132 (297)
Q Consensus 60 ~~i~vvGDIHG~~~~--L~~il~~~~~~~~~~~vfLGD~VDr-G~-~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~ 132 (297)
-+|+-++|+|-.... ..+.+........+-+++.|||+|+ .+ ....+...|..|+ .|-.++++.||||...
T Consensus 45 ~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~--~~~gv~av~GNHd~~~ 119 (284)
T COG1408 45 LKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLK--APLGVFAVLGNHDYGV 119 (284)
T ss_pred eEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhhh--ccCCEEEEeccccccc
Confidence 469999999977655 2233333333334778899999995 44 4445555565554 6778999999998654
No 81
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=96.66 E-value=0.053 Score=49.59 Aligned_cols=24 Identities=8% Similarity=0.079 Sum_probs=21.6
Q ss_pred cCHHHHHHHHHHCCCcEEEEcccc
Q 022466 230 FGSDVVADFLDKNDLDLICRGHQV 253 (297)
Q Consensus 230 fg~~~~~~fl~~~g~~~iIrgH~~ 253 (297)
-.++..++.|++.+-.+|.-||+-
T Consensus 203 l~~~~s~~il~~~~P~~vfsGhdH 226 (257)
T cd08163 203 LEPSLSEVILKAVQPVIAFSGDDH 226 (257)
T ss_pred cCHHHHHHHHHhhCCcEEEecCCC
Confidence 478999999999999999999974
No 82
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.60 E-value=0.0055 Score=51.55 Aligned_cols=119 Identities=20% Similarity=0.257 Sum_probs=80.5
Q ss_pred EEEecCCCCHHHHHHHHHhCC--CCCCCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhhhcCh
Q 022466 63 RICGDVHGQYQDLLRLFEHGG--YPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFY 140 (297)
Q Consensus 63 ~vvGDIHG~~~~L~~il~~~~--~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~ 140 (297)
.|+||+||+++.+.+-++... ..+-+-++++||+..-...+-+ +.-+..=....|--.+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~-~~~y~~g~~~~pipTyf~ggn~~----------- 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEE-LEAYKDGSKKVPIPTYFLGGNNP----------- 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhh-HHHHhcCCccCCCCEEEECCCCC-----------
Confidence 389999999999988776532 2345668899999976666534 33334445568889999999998
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCeEEEEcCcEEEecCCCCCCCCChHHhhccCCCCCCCCCCcccccccCCCCCCCCCCc
Q 022466 141 DECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWA 220 (297)
Q Consensus 141 ~e~~~~~~~~~~~~~~~~~~~LPl~a~i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~ 220 (297)
+-.||.+|.=+.. +...+++ ..+
T Consensus 69 ----------------------------~~DILlTh~wP~g-i~~~~~~-------------------~~~--------- 91 (150)
T cd07380 69 ----------------------------GVDILLTSEWPKG-ISKLSKV-------------------PFE--------- 91 (150)
T ss_pred ----------------------------CCCEEECCCCchh-hhhhCCC-------------------ccc---------
Confidence 3358888874421 1000000 000
Q ss_pred cCCCCCccccCHHHHHHHHHHCCCcEEEEccccc
Q 022466 221 DSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVR 254 (297)
Q Consensus 221 ~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~ 254 (297)
..+..-|...+++++++..-++.+-||..+
T Consensus 92 ----~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~ 121 (150)
T cd07380 92 ----ETLLICGSDLIAELAKKLKPRYHFAGLEGV 121 (150)
T ss_pred ----ccccCCCCHHHHHHHHHcCCCeEeecCCCc
Confidence 012244778999999999999999999754
No 83
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=96.59 E-value=0.0032 Score=53.96 Aligned_cols=50 Identities=22% Similarity=0.197 Sum_probs=31.4
Q ss_pred CCCCCCceeeccCccCCCCCcH--H---HHHHHHHhhh-hC----CCcEEEecCCchhhh
Q 022466 83 GYPPTANYLFLGDYVDRGKQSL--E---TICLLLAYKI-RY----PDKIHLLRGNHEDAK 132 (297)
Q Consensus 83 ~~~~~~~~vfLGD~VDrG~~s~--e---vl~ll~~lk~-~~----p~~v~~lrGNHE~~~ 132 (297)
...+.+.+|++||++|.+.... + .+..+.++.. .. +..++.+.||||...
T Consensus 42 ~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 42 QRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred HhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 3345678889999999887432 2 2222222211 11 457999999999864
No 84
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=96.40 E-value=0.0056 Score=53.70 Aligned_cols=46 Identities=24% Similarity=0.356 Sum_probs=33.3
Q ss_pred CCCceeeccCccCCCCCc--HHHHHHHHHhhhhC----CCcEEEecCCchhh
Q 022466 86 PTANYLFLGDYVDRGKQS--LETICLLLAYKIRY----PDKIHLLRGNHEDA 131 (297)
Q Consensus 86 ~~~~~vfLGD~VDrG~~s--~evl~ll~~lk~~~----p~~v~~lrGNHE~~ 131 (297)
..+-++|+||++|.|+.+ .+....+..++..+ .-.++.|.||||.-
T Consensus 42 ~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 42 QPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred CCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 457788999999999964 33566555555332 25689999999965
No 85
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.40 E-value=0.011 Score=49.76 Aligned_cols=68 Identities=18% Similarity=0.224 Sum_probs=43.3
Q ss_pred cEEEEecCCCC------------HHHHHHH-HHhCC--CCCCCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEec
Q 022466 61 PIRICGDVHGQ------------YQDLLRL-FEHGG--YPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLR 125 (297)
Q Consensus 61 ~i~vvGDIHG~------------~~~L~~i-l~~~~--~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lr 125 (297)
.++.+||.|=. .+....+ +.... ..|++.+.+|||+.-.-....+....+.+| +++.++++
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~IlerL----nGrkhlv~ 80 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILERL----NGRKHLVP 80 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHHHc----CCcEEEee
Confidence 47889999832 3333322 22111 245677889999986555555555555444 78999999
Q ss_pred CCchhhh
Q 022466 126 GNHEDAK 132 (297)
Q Consensus 126 GNHE~~~ 132 (297)
||||...
T Consensus 81 GNhDk~~ 87 (186)
T COG4186 81 GNHDKCH 87 (186)
T ss_pred CCCCCCc
Confidence 9999754
No 86
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=96.30 E-value=0.0067 Score=54.59 Aligned_cols=66 Identities=27% Similarity=0.282 Sum_probs=43.4
Q ss_pred cEEEEecCCCCH---------HHHHHHHHhCCCC-CCCceeeccCccCCCCCcH-----HHHHHHHHhhhhCCCcEEEec
Q 022466 61 PIRICGDVHGQY---------QDLLRLFEHGGYP-PTANYLFLGDYVDRGKQSL-----ETICLLLAYKIRYPDKIHLLR 125 (297)
Q Consensus 61 ~i~vvGDIHG~~---------~~L~~il~~~~~~-~~~~~vfLGD~VDrG~~s~-----evl~ll~~lk~~~p~~v~~lr 125 (297)
+|+.++|+||.+ ..+.++++...-. +..-++..||+++..+.+. .++..+.++ +..+ +..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~----g~d~-~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNAL----GYDA-VTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhc----CCCE-Eee
Confidence 588999999886 5566666665443 3345667999999887643 445544333 2344 445
Q ss_pred CCchhh
Q 022466 126 GNHEDA 131 (297)
Q Consensus 126 GNHE~~ 131 (297)
||||.-
T Consensus 77 GNHe~d 82 (252)
T cd00845 77 GNHEFD 82 (252)
T ss_pred cccccc
Confidence 999963
No 87
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=95.70 E-value=0.01 Score=53.04 Aligned_cols=73 Identities=18% Similarity=0.208 Sum_probs=45.5
Q ss_pred CcEEEEecCCCCHHHHHHHHHhCCCCCCCceeeccCccCCCCCcHH-------------------------HHHHHHHhh
Q 022466 60 APIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLE-------------------------TICLLLAYK 114 (297)
Q Consensus 60 ~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~e-------------------------vl~ll~~lk 114 (297)
.+|.+++|.||+++.|.++.+.+.-...+-++|+||++-....+.| .++-++..-
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~L 85 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRIL 85 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHHH
Confidence 4799999999999999999887766677889999999865443333 233333333
Q ss_pred hhCCCcEEEecCCchhhh
Q 022466 115 IRYPDKIHLLRGNHEDAK 132 (297)
Q Consensus 115 ~~~p~~v~~lrGNHE~~~ 132 (297)
...+-.++.|+||||...
T Consensus 86 ~~~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 86 GELGVPVFVVPGNMDAPE 103 (255)
T ss_dssp HCC-SEEEEE--TTS-SH
T ss_pred HhcCCcEEEecCCCCchH
Confidence 446778999999999864
No 88
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=95.42 E-value=0.026 Score=49.44 Aligned_cols=65 Identities=18% Similarity=0.184 Sum_probs=41.6
Q ss_pred cCCCCHHHHHHHHHhCCC-CCCCceeeccCccCCCCCcHHH-HHHHHHhhhhC---------------------CCcEEE
Q 022466 67 DVHGQYQDLLRLFEHGGY-PPTANYLFLGDYVDRGKQSLET-ICLLLAYKIRY---------------------PDKIHL 123 (297)
Q Consensus 67 DIHG~~~~L~~il~~~~~-~~~~~~vfLGD~VDrG~~s~ev-l~ll~~lk~~~---------------------p~~v~~ 123 (297)
|++|+=.-|.++++.+.. -..+.++||||++|.|--+-+- .....+.+..+ ...++.
T Consensus 24 d~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~ 103 (193)
T cd08164 24 DLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLIN 103 (193)
T ss_pred hhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEE
Confidence 566777777777776543 3456778999999987533222 23333333322 245799
Q ss_pred ecCCchhh
Q 022466 124 LRGNHEDA 131 (297)
Q Consensus 124 lrGNHE~~ 131 (297)
|.||||.-
T Consensus 104 V~GNHDIG 111 (193)
T cd08164 104 IAGNHDVG 111 (193)
T ss_pred ECCcccCC
Confidence 99999984
No 89
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=95.31 E-value=0.023 Score=52.15 Aligned_cols=65 Identities=22% Similarity=0.219 Sum_probs=38.5
Q ss_pred cEEEEecCCCCH----------------HHHHHHHHhCCCCCCCceee-ccCccCCCCCc-----------HHHHHHHHH
Q 022466 61 PIRICGDVHGQY----------------QDLLRLFEHGGYPPTANYLF-LGDYVDRGKQS-----------LETICLLLA 112 (297)
Q Consensus 61 ~i~vvGDIHG~~----------------~~L~~il~~~~~~~~~~~vf-LGD~VDrG~~s-----------~evl~ll~~ 112 (297)
+|+.++|+||.+ ..+..+++.......+.+++ .||+++..+.+ ..++..+-.
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 578899999986 33555565544332333333 79999876522 224444443
Q ss_pred hhhhCCCcEEEecCCchh
Q 022466 113 YKIRYPDKIHLLRGNHED 130 (297)
Q Consensus 113 lk~~~p~~v~~lrGNHE~ 130 (297)
+. -. ++..||||.
T Consensus 82 ~g----~d-~~~lGNHe~ 94 (277)
T cd07410 82 LG----YD-AGTLGNHEF 94 (277)
T ss_pred cC----CC-EEeecccCc
Confidence 32 23 455699995
No 90
>PLN02533 probable purple acid phosphatase
Probab=94.84 E-value=0.038 Score=54.21 Aligned_cols=71 Identities=17% Similarity=0.098 Sum_probs=40.5
Q ss_pred cCcEEEEecCCCCHHHHHHHHHhCCCCCCCceeeccCccCCCCCcH--H-HHHHHHHhhhhCCCcEEEecCCchhhh
Q 022466 59 EAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSL--E-TICLLLAYKIRYPDKIHLLRGNHEDAK 132 (297)
Q Consensus 59 ~~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~--e-vl~ll~~lk~~~p~~v~~lrGNHE~~~ 132 (297)
+-+++++||+|-. ......++.+.....+-++++||+++-+.... + -..++..+. ..-.++.+.||||...
T Consensus 139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~--s~~P~m~~~GNHE~~~ 212 (427)
T PLN02533 139 PIKFAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLA--SQRPWMVTHGNHELEK 212 (427)
T ss_pred CeEEEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHh--hcCceEEeCccccccc
Confidence 3579999999632 22223344333344566788999997543321 1 122222221 1235889999999753
No 91
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=94.74 E-value=0.089 Score=47.41 Aligned_cols=102 Identities=21% Similarity=0.281 Sum_probs=58.7
Q ss_pred cCcEEEEecCCCCHHH----------------HHHHHH-hCCCCCCCceeeccCccCCCCC-----cHHHHHHHHHhhhh
Q 022466 59 EAPIRICGDVHGQYQD----------------LLRLFE-HGGYPPTANYLFLGDYVDRGKQ-----SLETICLLLAYKIR 116 (297)
Q Consensus 59 ~~~i~vvGDIHG~~~~----------------L~~il~-~~~~~~~~~~vfLGD~VDrG~~-----s~evl~ll~~lk~~ 116 (297)
..++.||+|+|=-+.. +.+.++ ....-..+++|.+||+-.-.+. ..++-.++..++ .
T Consensus 19 ~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~-~ 97 (235)
T COG1407 19 LGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLD-E 97 (235)
T ss_pred cCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhc-c
Confidence 4789999999954432 222332 2223345789999999854332 233333333332 2
Q ss_pred CCCcEEEecCCchhhhhHhhhcChHHHHHHHHHHHHHHHHHHhhcCCeEEEEcCcEEEecCCCCCCC
Q 022466 117 YPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPEL 183 (297)
Q Consensus 117 ~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~LPl~a~i~~~il~vHgGi~p~~ 183 (297)
+ .+++++||||...-....++. ....+.. .+ ++++++||---|..
T Consensus 98 ~--evi~i~GNHD~~i~~~~~~~~------------------v~v~~~~-~i-~~~~~~HGh~~~~~ 142 (235)
T COG1407 98 R--EVIIIRGNHDNGIEEILPGFN------------------VEVVDEL-EI-GGLLFRHGHKEPEP 142 (235)
T ss_pred C--cEEEEeccCCCccccccccCC------------------ceeeeeE-Ee-cCEEEEeCCCCCcc
Confidence 2 599999999986533333321 1122333 23 46999999776543
No 92
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=94.73 E-value=0.077 Score=50.41 Aligned_cols=73 Identities=25% Similarity=0.430 Sum_probs=48.8
Q ss_pred CcEEEEecCCCCHHHHHH---HHHhCCCCCCCceeeccCccC-CCC---CcHHH---------HHHHHHhhhhCCCcEEE
Q 022466 60 APIRICGDVHGQYQDLLR---LFEHGGYPPTANYLFLGDYVD-RGK---QSLET---------ICLLLAYKIRYPDKIHL 123 (297)
Q Consensus 60 ~~i~vvGDIHG~~~~L~~---il~~~~~~~~~~~vfLGD~VD-rG~---~s~ev---------l~ll~~lk~~~p~~v~~ 123 (297)
|||.|=|=-||+++.+-+ ..++.|-.+.+.+++.||+=. |.. +++.+ +.--.+=.+.+|---++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 689999999999999984 445566667788999999752 211 12111 11112222346777889
Q ss_pred ecCCchhhh
Q 022466 124 LRGNHEDAK 132 (297)
Q Consensus 124 lrGNHE~~~ 132 (297)
|-||||.++
T Consensus 81 IGGNHEAsn 89 (456)
T KOG2863|consen 81 IGGNHEASN 89 (456)
T ss_pred ecCchHHHH
Confidence 999999975
No 93
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=94.66 E-value=0.069 Score=48.62 Aligned_cols=70 Identities=21% Similarity=0.167 Sum_probs=40.0
Q ss_pred cEEEEecCCCC--H--HHHHHHHH-hCCCCCCCceeeccCcc-CCCCCcH------HHHHHHHHhhhhCCCcEEEecCCc
Q 022466 61 PIRICGDVHGQ--Y--QDLLRLFE-HGGYPPTANYLFLGDYV-DRGKQSL------ETICLLLAYKIRYPDKIHLLRGNH 128 (297)
Q Consensus 61 ~i~vvGDIHG~--~--~~L~~il~-~~~~~~~~~~vfLGD~V-DrG~~s~------evl~ll~~lk~~~p~~v~~lrGNH 128 (297)
+++++||.=.. . ..+.+.+. .+...+.+-+|++||++ +-|..+. +.+..++.. ....-.++.+.|||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~-~~~~~P~~~v~GNH 80 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSA-PSLQVPWYLVLGNH 80 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccc-hhhcCCeEEecCCc
Confidence 57899998653 1 23333332 33334456688999997 5553221 222322221 11345799999999
Q ss_pred hhh
Q 022466 129 EDA 131 (297)
Q Consensus 129 E~~ 131 (297)
|..
T Consensus 81 D~~ 83 (277)
T cd07378 81 DYS 83 (277)
T ss_pred ccC
Confidence 976
No 94
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=94.40 E-value=0.47 Score=46.84 Aligned_cols=121 Identities=24% Similarity=0.366 Sum_probs=65.8
Q ss_pred cEEEEecCC-CCHHHHHHHHH----hCC----CCCCCcee-eccCccCC-CC-----------CcHHHHHHHHHhhhhCC
Q 022466 61 PIRICGDVH-GQYQDLLRLFE----HGG----YPPTANYL-FLGDYVDR-GK-----------QSLETICLLLAYKIRYP 118 (297)
Q Consensus 61 ~i~vvGDIH-G~~~~L~~il~----~~~----~~~~~~~v-fLGD~VDr-G~-----------~s~evl~ll~~lk~~~p 118 (297)
.++.++|+| |...-+...+. -++ ..+..+|+ ..||.||. |- +..|-++.+..+-.+-|
T Consensus 227 ~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~vp 306 (481)
T COG1311 227 YVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQVP 306 (481)
T ss_pred EEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhCC
Confidence 488999999 45444443332 222 22334555 68899994 21 22333444444444455
Q ss_pred C--cEEEecCCchhhhhHhhhcChHHHHHHHHHHHHHHHHHHhhcCCeEEEEcC-cEEEecCCCCCCCCChHHhhc
Q 022466 119 D--KIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINE-KILCMHGGLSPELENLDQIRN 191 (297)
Q Consensus 119 ~--~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~LPl~a~i~~-~il~vHgGi~p~~~~l~~i~~ 191 (297)
. .+++.+||||..-.........+.. ..++...+-.|-.=|....+++ .++..|| .+++++.+
T Consensus 307 ~~I~v~i~PGnhDa~r~a~PQp~~~~~~----kslf~~~n~~~v~NP~~~~l~G~~vL~~hG------~sidDii~ 372 (481)
T COG1311 307 EHIKVFIMPGNHDAVRQALPQPHFPELI----KSLFSLNNLLFVSNPALVSLHGVDVLIYHG------RSIDDIIK 372 (481)
T ss_pred CCceEEEecCCCCccccccCCCCcchhh----cccccccceEecCCCcEEEECCEEEEEecC------CCHHHHHh
Confidence 4 4889999999876543322222211 1222222223444466666655 5888888 36666644
No 95
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=94.03 E-value=0.087 Score=47.85 Aligned_cols=65 Identities=22% Similarity=0.138 Sum_probs=40.3
Q ss_pred cEEEEecCCCCH----------HHHHHHHHhCCCCCCCceeeccCccCCCCCc-----HHHHHHHHHhhhhCCCcEEEec
Q 022466 61 PIRICGDVHGQY----------QDLLRLFEHGGYPPTANYLFLGDYVDRGKQS-----LETICLLLAYKIRYPDKIHLLR 125 (297)
Q Consensus 61 ~i~vvGDIHG~~----------~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s-----~evl~ll~~lk~~~p~~v~~lr 125 (297)
+|+-++|+||++ ..+..+++.....+.+-++..||.++..+.+ ..++..+-.+ +-.+ ...
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~----g~d~-~~~ 76 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAV----GYDA-VTP 76 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhc----CCcE-Ecc
Confidence 578899999975 3455566555433455566799999876543 2333333332 2344 456
Q ss_pred CCchh
Q 022466 126 GNHED 130 (297)
Q Consensus 126 GNHE~ 130 (297)
||||.
T Consensus 77 GNHef 81 (257)
T cd07408 77 GNHEF 81 (257)
T ss_pred ccccc
Confidence 99995
No 96
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=93.42 E-value=0.099 Score=48.42 Aligned_cols=66 Identities=26% Similarity=0.277 Sum_probs=41.3
Q ss_pred cEEEEecCCCCHHH--------------HHHHHHhCCCC-CCCceeeccCccCCCCC-c-----HHHHHHHHHhhhhCCC
Q 022466 61 PIRICGDVHGQYQD--------------LLRLFEHGGYP-PTANYLFLGDYVDRGKQ-S-----LETICLLLAYKIRYPD 119 (297)
Q Consensus 61 ~i~vvGDIHG~~~~--------------L~~il~~~~~~-~~~~~vfLGD~VDrG~~-s-----~evl~ll~~lk~~~p~ 119 (297)
+|+.+.|+||++.. +..+++..... +..-++..||++...+. + ..++..+-++. -
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g----~ 77 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMG----V 77 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhC----C
Confidence 57889999998543 55666655432 34456679999987654 2 23455554443 2
Q ss_pred cEEEecCCchhh
Q 022466 120 KIHLLRGNHEDA 131 (297)
Q Consensus 120 ~v~~lrGNHE~~ 131 (297)
.+ +..||||.-
T Consensus 78 Da-~t~GNHefd 88 (288)
T cd07412 78 DA-SAVGNHEFD 88 (288)
T ss_pred ee-eeecccccc
Confidence 34 555999953
No 97
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=93.30 E-value=0.26 Score=38.28 Aligned_cols=45 Identities=18% Similarity=0.327 Sum_probs=33.6
Q ss_pred cCChHHHHHHHHHHHcCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeee
Q 022466 9 MMDKVVLDDIIRRLLEGRGGKQVQLSESEIRQLCVNARQIFLSQPNLVEV 58 (297)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~ 58 (297)
.++.+.+.++|+++... ..|+...+..++.++.++|+++|+++++
T Consensus 51 ~it~efv~~mie~FK~~-----K~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 51 PITLEFVKAMIEWFKNQ-----KKLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp B--HHHHHHHHHHHHCT---------HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred CCCHHHHHHHHHHHHhC-----CCccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 47888899999998532 3677899999999999999999999985
No 98
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=92.43 E-value=0.9 Score=38.20 Aligned_cols=119 Identities=25% Similarity=0.406 Sum_probs=80.0
Q ss_pred EEEEecCCC--CHHHHHHHHHhCCCCCC-CceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhhhc
Q 022466 62 IRICGDVHG--QYQDLLRLFEHGGYPPT-ANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYG 138 (297)
Q Consensus 62 i~vvGDIHG--~~~~L~~il~~~~~~~~-~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~g 138 (297)
+.++||+|= ...+|-.-|++.-.|.. ..++++|++ .|.|++++|..+ .++++++||--|..
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNl-----cs~e~~dylk~l----~~dvhiVrGeFD~~------- 66 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNL-----CSKESYDYLKTL----SSDVHIVRGEFDEN------- 66 (183)
T ss_pred EEEeccccCCccccccCHHHHhccCCCceeEEEEeCCc-----chHHHHHHHHhh----CCCcEEEecccCcc-------
Confidence 678999993 34455555666556654 567899996 577889998766 36899999987653
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhcCCeEEEE--c-CcEEEecCCCCCCCCChHHhhccCCCCCCCCCCcccccccCCCCCC
Q 022466 139 FYDECKRRFNVRLWKIFTDCFNCLPVAALI--N-EKILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDAN 215 (297)
Q Consensus 139 f~~e~~~~~~~~~~~~~~~~~~~LPl~a~i--~-~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~ 215 (297)
..-|..-++ + =++-|+||-.- +=|+||.
T Consensus 67 ---------------------~~yP~~kvvtvGqfkIG~chGhqV--------------------------iP~gd~~-- 97 (183)
T KOG3325|consen 67 ---------------------LKYPENKVVTVGQFKIGLCHGHQV--------------------------IPWGDPE-- 97 (183)
T ss_pred ---------------------ccCCccceEEeccEEEEeecCcEe--------------------------ecCCCHH--
Confidence 112333222 2 26899998532 2355553
Q ss_pred CCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcccccccchhcccc
Q 022466 216 IEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVRHFHFEHADY 263 (297)
Q Consensus 216 ~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~~~~~ 263 (297)
.+...-+..+++.++-||+..-+-|+...+
T Consensus 98 ------------------sL~~LaRqldvDILl~G~Th~f~Aye~eg~ 127 (183)
T KOG3325|consen 98 ------------------SLALLARQLDVDILLTGHTHKFEAYEHEGK 127 (183)
T ss_pred ------------------HHHHHHHhcCCcEEEeCCceeEEEEEeCCc
Confidence 444556678999999999998888875443
No 99
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=91.74 E-value=0.4 Score=45.39 Aligned_cols=72 Identities=19% Similarity=0.175 Sum_probs=46.3
Q ss_pred cEEEEecCCCCHH-----------------HHH--HHH-HhCCCCCCCceeeccCccCCCC--CcHHHHHHHHHhhhhCC
Q 022466 61 PIRICGDVHGQYQ-----------------DLL--RLF-EHGGYPPTANYLFLGDYVDRGK--QSLETICLLLAYKIRYP 118 (297)
Q Consensus 61 ~i~vvGDIHG~~~-----------------~L~--~il-~~~~~~~~~~~vfLGD~VDrG~--~s~evl~ll~~lk~~~p 118 (297)
+|+.|.|+|=... |+. ..+ +.+.....+.+||+||.|+.-. +...++....+-.+.+.
T Consensus 55 KIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~t~Da~~sl~kAvaP~I~~~ 134 (379)
T KOG1432|consen 55 KILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHSTQDAATSLMKAVAPAIDRK 134 (379)
T ss_pred EEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccccccHhHHHHHHHHhhhHhhcC
Confidence 6899999994443 111 111 1223345577899999998621 34445555555556676
Q ss_pred CcEEEecCCchhhh
Q 022466 119 DKIHLLRGNHEDAK 132 (297)
Q Consensus 119 ~~v~~lrGNHE~~~ 132 (297)
-....+.||||...
T Consensus 135 IPwA~~lGNHDdes 148 (379)
T KOG1432|consen 135 IPWAAVLGNHDDES 148 (379)
T ss_pred CCeEEEeccccccc
Confidence 77889999999864
No 100
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=91.50 E-value=0.3 Score=44.50 Aligned_cols=65 Identities=18% Similarity=0.124 Sum_probs=36.6
Q ss_pred cEEEEecCCCCHH----------------------HHHHHHHhCCCC-CCCc-eeeccCccCCCCCc-----HHHHHHHH
Q 022466 61 PIRICGDVHGQYQ----------------------DLLRLFEHGGYP-PTAN-YLFLGDYVDRGKQS-----LETICLLL 111 (297)
Q Consensus 61 ~i~vvGDIHG~~~----------------------~L~~il~~~~~~-~~~~-~vfLGD~VDrG~~s-----~evl~ll~ 111 (297)
.+..++|+||++. .+..+++..... ..+. ++..||+++..+.+ ..++..+-
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~ 81 (264)
T cd07411 2 TLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALN 81 (264)
T ss_pred EEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHH
Confidence 3667888888753 334455544322 2333 45699999877643 23344443
Q ss_pred HhhhhCCCcEEEecCCchhh
Q 022466 112 AYKIRYPDKIHLLRGNHEDA 131 (297)
Q Consensus 112 ~lk~~~p~~v~~lrGNHE~~ 131 (297)
++ +-.+.. ||||.-
T Consensus 82 ~~----g~da~~--GNHefd 95 (264)
T cd07411 82 AL----GVDAMV--GHWEFT 95 (264)
T ss_pred hh----CCeEEe--cccccc
Confidence 32 333333 999953
No 101
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=91.27 E-value=0.2 Score=50.85 Aligned_cols=60 Identities=18% Similarity=0.322 Sum_probs=42.9
Q ss_pred CCHHHHHHHHHh-CCCCCCCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhH
Q 022466 70 GQYQDLLRLFEH-GGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKIN 134 (297)
Q Consensus 70 G~~~~L~~il~~-~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~ 134 (297)
|..++|...|.. +..-..+++-.+||+.||||.+-.+++.|+.. ..|=+--||||-.++.
T Consensus 167 ~~a~~fI~al~~lIqrL~VDhLHIvGDIyDRGp~pd~ImD~Lm~~-----hsvDIQWGNHDIlWMG 227 (640)
T PF06874_consen 167 GRADEFIIALSELIQRLAVDHLHIVGDIYDRGPRPDKIMDRLMNY-----HSVDIQWGNHDILWMG 227 (640)
T ss_pred CcHHHHHHHHHHHHHHHhhhheeecccccCCCCChhHHHHHHhcC-----CCccccccchHHHHHH
Confidence 345555444332 11122467778999999999999999999865 3788889999987763
No 102
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=91.13 E-value=0.43 Score=41.42 Aligned_cols=73 Identities=19% Similarity=0.238 Sum_probs=43.9
Q ss_pred CCCceeeccCcc--CCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhhhcChHHHHHHHHHHHHHHHHHHhhcCC
Q 022466 86 PTANYLFLGDYV--DRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLP 163 (297)
Q Consensus 86 ~~~~~vfLGD~V--DrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~LP 163 (297)
+++.++.-||+- -|=+...+-+.++-+| |+.=+++|||||...-.. ..+...+... .-..++.|..+.
T Consensus 43 ~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~K~m~rGNHDYWw~s~-----skl~n~lp~~-l~~~n~~f~l~n 112 (230)
T COG1768 43 PEDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGTKYMIRGNHDYWWSSI-----SKLNNALPPI-LFYLNNGFELLN 112 (230)
T ss_pred hhhEEEecccchhheechhhhhhhhhhhcC----CCcEEEEecCCccccchH-----HHHHhhcCch-HhhhccceeEee
Confidence 455666789975 3555666667777655 899999999999875321 1122222222 234456666666
Q ss_pred eEEEEc
Q 022466 164 VAALIN 169 (297)
Q Consensus 164 l~a~i~ 169 (297)
.| +++
T Consensus 113 ~a-I~G 117 (230)
T COG1768 113 YA-IVG 117 (230)
T ss_pred EE-EEE
Confidence 43 444
No 103
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=90.85 E-value=0.41 Score=46.50 Aligned_cols=71 Identities=25% Similarity=0.370 Sum_probs=46.4
Q ss_pred CcEEEEecCC--CCH---------------HHHHHHHHhCCCC-CCCceeeccCccCCCCC--cHHHHHHHHHhhhhCCC
Q 022466 60 APIRICGDVH--GQY---------------QDLLRLFEHGGYP-PTANYLFLGDYVDRGKQ--SLETICLLLAYKIRYPD 119 (297)
Q Consensus 60 ~~i~vvGDIH--G~~---------------~~L~~il~~~~~~-~~~~~vfLGD~VDrG~~--s~evl~ll~~lk~~~p~ 119 (297)
.++..|+|-| |+. .-|.+.+...-+. ..+-.+||||++|-|.. .-|--....++|..++.
T Consensus 49 ~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~ 128 (410)
T KOG3662|consen 49 TKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGR 128 (410)
T ss_pred eEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhCC
Confidence 4788888876 421 1234455544443 34556689999998875 34445556666666554
Q ss_pred ----cEEEecCCchh
Q 022466 120 ----KIHLLRGNHED 130 (297)
Q Consensus 120 ----~v~~lrGNHE~ 130 (297)
.+..+.||||-
T Consensus 129 k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 129 KGNIKVIYIAGNHDI 143 (410)
T ss_pred CCCCeeEEeCCcccc
Confidence 68999999996
No 104
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=90.29 E-value=0.49 Score=43.63 Aligned_cols=61 Identities=21% Similarity=0.225 Sum_probs=36.8
Q ss_pred HHHHHHHHhCCC--CCCCceeeccCccCCCCCcH--H------HHHHHHHhhhhCC-CcEEEecCCchhhhh
Q 022466 73 QDLLRLFEHGGY--PPTANYLFLGDYVDRGKQSL--E------TICLLLAYKIRYP-DKIHLLRGNHEDAKI 133 (297)
Q Consensus 73 ~~L~~il~~~~~--~~~~~~vfLGD~VDrG~~s~--e------vl~ll~~lk~~~p-~~v~~lrGNHE~~~~ 133 (297)
..+..+++.+.. ++.+-+|+.||+++.+.... + .-.+...++...| -.++.+.||||....
T Consensus 53 ~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~ 124 (296)
T cd00842 53 RLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPV 124 (296)
T ss_pred HHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCcc
Confidence 445555554433 35667889999998876431 1 1222223333333 469999999998654
No 105
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=89.77 E-value=3.9 Score=35.65 Aligned_cols=87 Identities=15% Similarity=0.261 Sum_probs=67.5
Q ss_pred CceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhhhcCh----------------HHHHHHHHHHH
Q 022466 88 ANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFY----------------DECKRRFNVRL 151 (297)
Q Consensus 88 ~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~----------------~e~~~~~~~~~ 151 (297)
..+|+||- |-+.-|.++++-+++..|.++.+. .|+-|.|..++...|. .|..+.|-..+
T Consensus 40 ~~lVvlGS----GGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~ltSv 114 (211)
T KOG3339|consen 40 STLVVLGS----GGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSWLTSV 114 (211)
T ss_pred eEEEEEcC----CCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhhhhhH
Confidence 45888985 999999999999999998877766 8999999887654432 34444555567
Q ss_pred HHHHHHHhhcCCeEEEEcCcEEEecC-CC
Q 022466 152 WKIFTDCFNCLPVAALINEKILCMHG-GL 179 (297)
Q Consensus 152 ~~~~~~~~~~LPl~a~i~~~il~vHg-Gi 179 (297)
|..+...+.++++...+..+++.+-| |-
T Consensus 115 ~Tti~all~s~~lv~RirPdlil~NGPGT 143 (211)
T KOG3339|consen 115 FTTIWALLQSFVLVWRIRPDLILCNGPGT 143 (211)
T ss_pred HHHHHHHHHHheEEEecCCCEEEECCCCc
Confidence 78888888889998888777777777 44
No 106
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=89.73 E-value=0.68 Score=42.67 Aligned_cols=66 Identities=18% Similarity=0.133 Sum_probs=37.8
Q ss_pred cEEEEecCCCCH---------------------HHHHHHHHhCCCC-CCCceeeccCccCCCCC-----cHHHHHHHHHh
Q 022466 61 PIRICGDVHGQY---------------------QDLLRLFEHGGYP-PTANYLFLGDYVDRGKQ-----SLETICLLLAY 113 (297)
Q Consensus 61 ~i~vvGDIHG~~---------------------~~L~~il~~~~~~-~~~~~vfLGD~VDrG~~-----s~evl~ll~~l 113 (297)
+|+-++|+||++ ..+..+++..... +..-++-.||.++..+. ....+..+-.+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~ 81 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL 81 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc
Confidence 467889999875 3444555554332 33334458999987653 23334444333
Q ss_pred hhhCCCcEEEecCCchhh
Q 022466 114 KIRYPDKIHLLRGNHEDA 131 (297)
Q Consensus 114 k~~~p~~v~~lrGNHE~~ 131 (297)
+-.+.. .||||.-
T Consensus 82 ----g~D~~~-lGNHefd 94 (281)
T cd07409 82 ----GYDAMT-LGNHEFD 94 (281)
T ss_pred ----CCCEEE-ecccccc
Confidence 224444 4999963
No 107
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=89.72 E-value=0.43 Score=52.64 Aligned_cols=66 Identities=20% Similarity=0.115 Sum_probs=40.5
Q ss_pred CcEEEEecCCCCH---HHHHHHHHhCCCCCCCcee-eccCccCCCCCc-----HHHHHHHHHhhhhCCCcEEEecCCchh
Q 022466 60 APIRICGDVHGQY---QDLLRLFEHGGYPPTANYL-FLGDYVDRGKQS-----LETICLLLAYKIRYPDKIHLLRGNHED 130 (297)
Q Consensus 60 ~~i~vvGDIHG~~---~~L~~il~~~~~~~~~~~v-fLGD~VDrG~~s-----~evl~ll~~lk~~~p~~v~~lrGNHE~ 130 (297)
-+|+.++|+||.+ ..+..+++...-...+.++ ..||+++..+.+ ...+..+-++. --+...||||.
T Consensus 661 l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg-----~d~~~~GNHEf 735 (1163)
T PRK09419 661 LTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMG-----YDASTFGNHEF 735 (1163)
T ss_pred EEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcC-----CCEEEeccccc
Confidence 3588999999885 4444455544322233343 489999887644 24455554432 23558899996
No 108
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=89.03 E-value=0.93 Score=41.73 Aligned_cols=67 Identities=16% Similarity=0.081 Sum_probs=48.2
Q ss_pred CcEEEEecCCCC--HHHHHHHHHhCCCCCC-CceeeccCccCCC-CCcHHHHHHHHHhhhhCCCcEEEecCCchhh
Q 022466 60 APIRICGDVHGQ--YQDLLRLFEHGGYPPT-ANYLFLGDYVDRG-KQSLETICLLLAYKIRYPDKIHLLRGNHEDA 131 (297)
Q Consensus 60 ~~i~vvGDIHG~--~~~L~~il~~~~~~~~-~~~vfLGD~VDrG-~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~ 131 (297)
|+|.++|||=|. ...+...|..+...-. +-+|..||-..-| .-+.++...|.+. +-+++.+ |||+.-
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~----GvDviT~-GNH~~D 71 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQS----GVNYITM-GNHTWF 71 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhc----CCCEEEc-cchhcc
Confidence 689999999999 5667777776654433 3444589998766 4577788877655 4466666 999864
No 109
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=88.40 E-value=0.86 Score=41.39 Aligned_cols=56 Identities=21% Similarity=0.107 Sum_probs=35.2
Q ss_pred CCHHHHHHHHHhCCCCC-CCceeeccCccCCCCC-----cHHHHHHHHHhhhhCCCcEEEecCCchh
Q 022466 70 GQYQDLLRLFEHGGYPP-TANYLFLGDYVDRGKQ-----SLETICLLLAYKIRYPDKIHLLRGNHED 130 (297)
Q Consensus 70 G~~~~L~~il~~~~~~~-~~~~vfLGD~VDrG~~-----s~evl~ll~~lk~~~p~~v~~lrGNHE~ 130 (297)
|.+..+..+++...... ..-++..||+++..+. ...++..+-.+. --+...||||.
T Consensus 21 gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~-----~d~~~~GNHef 82 (257)
T cd07406 21 GGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG-----VDLACFGNHEF 82 (257)
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcC-----CcEEeeccccc
Confidence 44677777777655433 3356679999987753 234555554442 23556899996
No 110
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=87.68 E-value=0.84 Score=39.76 Aligned_cols=72 Identities=11% Similarity=0.161 Sum_probs=41.5
Q ss_pred EEEEecCCCC-----HHHHHHHHHhCC-CCCCCceeeccCccCCCCCcH-------------HHHHHHHHhhhh--CCCc
Q 022466 62 IRICGDVHGQ-----YQDLLRLFEHGG-YPPTANYLFLGDYVDRGKQSL-------------ETICLLLAYKIR--YPDK 120 (297)
Q Consensus 62 i~vvGDIHG~-----~~~L~~il~~~~-~~~~~~~vfLGD~VDrG~~s~-------------evl~ll~~lk~~--~p~~ 120 (297)
|++++|+|=. ++.|.++|+... ....+.+|++|+++|.-.... +.+..+.+.... .--+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5778888854 667778888777 666678999999999632211 111111111111 3368
Q ss_pred EEEecCCchhhhh
Q 022466 121 IHLLRGNHEDAKI 133 (297)
Q Consensus 121 v~~lrGNHE~~~~ 133 (297)
|+++.|+||....
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999998764
No 111
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=85.97 E-value=0.94 Score=41.86 Aligned_cols=66 Identities=18% Similarity=0.020 Sum_probs=36.0
Q ss_pred cEEEEecCCCCHHH----------HHHHHHhCCC-----CCCCceeeccCccCCCCC-----cHHHHHHHHHhhhhCCCc
Q 022466 61 PIRICGDVHGQYQD----------LLRLFEHGGY-----PPTANYLFLGDYVDRGKQ-----SLETICLLLAYKIRYPDK 120 (297)
Q Consensus 61 ~i~vvGDIHG~~~~----------L~~il~~~~~-----~~~~~~vfLGD~VDrG~~-----s~evl~ll~~lk~~~p~~ 120 (297)
.|+.+.|+||++.. +..+++.... .++.-++-.||.+...+. ...++.++-++. -.
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g----~D 77 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG----YD 77 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhC----Cc
Confidence 47788999998533 3344443321 233445559999843332 223344444432 24
Q ss_pred EEEecCCchhh
Q 022466 121 IHLLRGNHEDA 131 (297)
Q Consensus 121 v~~lrGNHE~~ 131 (297)
+.. .||||.-
T Consensus 78 a~~-~GNHEfD 87 (285)
T cd07405 78 AMA-VGNHEFD 87 (285)
T ss_pred EEe-ecccccc
Confidence 444 4999953
No 112
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=84.53 E-value=1.2 Score=44.58 Aligned_cols=68 Identities=26% Similarity=0.262 Sum_probs=41.9
Q ss_pred cCcEEEEecCCCCHH------------HHHH---HHHhCCCCC-CCceeeccCccCCCC------CcHHHHHHHHHhhhh
Q 022466 59 EAPIRICGDVHGQYQ------------DLLR---LFEHGGYPP-TANYLFLGDYVDRGK------QSLETICLLLAYKIR 116 (297)
Q Consensus 59 ~~~i~vvGDIHG~~~------------~L~~---il~~~~~~~-~~~~vfLGD~VDrG~------~s~evl~ll~~lk~~ 116 (297)
+-+|+-..|+||.+. .+.+ +.++..-.. +..+|=.||+++..+ .....+.++-.++.
T Consensus 26 ~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~y- 104 (517)
T COG0737 26 KLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALGY- 104 (517)
T ss_pred eEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcCC-
Confidence 347889999999998 3333 333322222 233445999999843 33445666665542
Q ss_pred CCCcEEEecCCchhh
Q 022466 117 YPDKIHLLRGNHEDA 131 (297)
Q Consensus 117 ~p~~v~~lrGNHE~~ 131 (297)
=....||||.-
T Consensus 105 ----Da~tiGNHEFd 115 (517)
T COG0737 105 ----DAMTLGNHEFD 115 (517)
T ss_pred ----cEEeecccccc
Confidence 25667999975
No 113
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=84.16 E-value=1.3 Score=41.04 Aligned_cols=66 Identities=18% Similarity=0.059 Sum_probs=36.9
Q ss_pred cEEEEecCCCCHH----------------HHHHHHHh-CCC-CCCCceeeccCccCCCCCc-------HHHHHHHHHhhh
Q 022466 61 PIRICGDVHGQYQ----------------DLLRLFEH-GGY-PPTANYLFLGDYVDRGKQS-------LETICLLLAYKI 115 (297)
Q Consensus 61 ~i~vvGDIHG~~~----------------~L~~il~~-~~~-~~~~~~vfLGD~VDrG~~s-------~evl~ll~~lk~ 115 (297)
+|+-+.|+||.+. .+.+.++. ... .++.-++..||.++.-+.+ ...+.++-.+.
T Consensus 7 tILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~mg- 85 (282)
T cd07407 7 NFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMMP- 85 (282)
T ss_pred EEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhcC-
Confidence 6888999999864 22222221 111 2233455699999765432 22344444332
Q ss_pred hCCCcEEEecCCchhh
Q 022466 116 RYPDKIHLLRGNHEDA 131 (297)
Q Consensus 116 ~~p~~v~~lrGNHE~~ 131 (297)
-=....||||.-
T Consensus 86 ----yDa~tlGNHEFd 97 (282)
T cd07407 86 ----YDLLTIGNHELY 97 (282)
T ss_pred ----CcEEeecccccC
Confidence 335677999984
No 114
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=83.75 E-value=2.2 Score=41.93 Aligned_cols=69 Identities=22% Similarity=0.386 Sum_probs=53.2
Q ss_pred cCcEEEEecCCCCHHHHHHHHHhCCC--CCCCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCc
Q 022466 59 EAPIRICGDVHGQYQDLLRLFEHGGY--PPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNH 128 (297)
Q Consensus 59 ~~~i~vvGDIHG~~~~L~~il~~~~~--~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNH 128 (297)
+.+|.|+||+-|+++.|.+-.+.... .|-+.++++|++.+-..++.|++.+...- ...|-.++++-+|-
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~-~~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGT-KKVPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCC-ccCceeEEEecCCC
Confidence 47999999999999999877665543 23567889999999877888888776543 35677788887775
No 115
>PF14164 YqzH: YqzH-like protein
Probab=81.30 E-value=5.3 Score=28.63 Aligned_cols=45 Identities=20% Similarity=0.362 Sum_probs=37.9
Q ss_pred CChHHHHHHHHHHHcC--CCCccccCCHHHHHHHHHHHHHHHhhCCC
Q 022466 10 MDKVVLDDIIRRLLEG--RGGKQVQLSESEIRQLCVNARQIFLSQPN 54 (297)
Q Consensus 10 ~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~l~~~~~~il~~ep~ 54 (297)
|+.-.|+++|.+.+.. ......+|++.|...|+......-.++|.
T Consensus 1 M~ek~I~Kmi~~~l~QYg~d~~~~pls~~E~~~L~~~i~~~~~~~~~ 47 (64)
T PF14164_consen 1 MNEKLIEKMIINCLRQYGYDVECMPLSDEEWEELCKHIQERKNEEPD 47 (64)
T ss_pred CcHHHHHHHHHHHHHHhCCcccCCCCCHHHHHHHHHHHHHHHhcCCC
Confidence 4566889999999887 34567899999999999999999999886
No 116
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=80.86 E-value=2.5 Score=39.69 Aligned_cols=65 Identities=20% Similarity=0.062 Sum_probs=38.7
Q ss_pred cEEEEecCCCCHH------HHHHHHHhCCC-----CCCCceeeccCccCCCCC-------------cHHHHHHHHHhhhh
Q 022466 61 PIRICGDVHGQYQ------DLLRLFEHGGY-----PPTANYLFLGDYVDRGKQ-------------SLETICLLLAYKIR 116 (297)
Q Consensus 61 ~i~vvGDIHG~~~------~L~~il~~~~~-----~~~~~~vfLGD~VDrG~~-------------s~evl~ll~~lk~~ 116 (297)
.|+-+.|+||++. .+..+++.... .++.-++..||.+.-++. ...++.++-++.
T Consensus 2 ~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g-- 79 (313)
T cd08162 2 QLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALG-- 79 (313)
T ss_pred eEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccC--
Confidence 3667899999953 33333443221 234456679999875543 334455555553
Q ss_pred CCCcEEEecCCchh
Q 022466 117 YPDKIHLLRGNHED 130 (297)
Q Consensus 117 ~p~~v~~lrGNHE~ 130 (297)
-=....||||.
T Consensus 80 ---~Da~tlGNHEF 90 (313)
T cd08162 80 ---VQAIALGNHEF 90 (313)
T ss_pred ---CcEEecccccc
Confidence 23566899995
No 117
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=80.32 E-value=2.4 Score=43.90 Aligned_cols=68 Identities=18% Similarity=0.076 Sum_probs=42.1
Q ss_pred ecCcEEEEecCCCCHHH----------------HHHHHHhCCC-CCCCceeeccCccCCCCCcH-------------HHH
Q 022466 58 VEAPIRICGDVHGQYQD----------------LLRLFEHGGY-PPTANYLFLGDYVDRGKQSL-------------ETI 107 (297)
Q Consensus 58 ~~~~i~vvGDIHG~~~~----------------L~~il~~~~~-~~~~~~vfLGD~VDrG~~s~-------------evl 107 (297)
..-+|.-..|+||++.. +..+++.... .++.-+|-.||.+...+.+- .++
T Consensus 24 ~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i 103 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVY 103 (649)
T ss_pred ceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHH
Confidence 35688999999999743 3333443322 23445666999998665421 245
Q ss_pred HHHHHhhhhCCCcEEEecCCchh
Q 022466 108 CLLLAYKIRYPDKIHLLRGNHED 130 (297)
Q Consensus 108 ~ll~~lk~~~p~~v~~lrGNHE~ 130 (297)
..+-.+. --....||||.
T Consensus 104 ~amN~lg-----yDa~tlGNHEF 121 (649)
T PRK09420 104 KAMNTLD-----YDVGNLGNHEF 121 (649)
T ss_pred HHHHhcC-----CcEEeccchhh
Confidence 5555553 33567899995
No 118
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=80.19 E-value=2.3 Score=43.85 Aligned_cols=66 Identities=18% Similarity=0.061 Sum_probs=39.5
Q ss_pred CcEEEEecCCCCHHH----------------HHHHHHhCCCC-CCCceeeccCccCCCCCc-------------HHHHHH
Q 022466 60 APIRICGDVHGQYQD----------------LLRLFEHGGYP-PTANYLFLGDYVDRGKQS-------------LETICL 109 (297)
Q Consensus 60 ~~i~vvGDIHG~~~~----------------L~~il~~~~~~-~~~~~vfLGD~VDrG~~s-------------~evl~l 109 (297)
-+|.-..|+||++.. +..+++..... ++.-+|-.||.+...+.+ ..++.+
T Consensus 3 l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~ 82 (626)
T TIGR01390 3 LRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKA 82 (626)
T ss_pred EEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHH
Confidence 368889999999743 33344433222 334455699999865433 234555
Q ss_pred HHHhhhhCCCcEEEecCCchh
Q 022466 110 LLAYKIRYPDKIHLLRGNHED 130 (297)
Q Consensus 110 l~~lk~~~p~~v~~lrGNHE~ 130 (297)
+-.+. -=....||||.
T Consensus 83 mN~lg-----yDa~tlGNHEF 98 (626)
T TIGR01390 83 MNLLK-----YDVGNLGNHEF 98 (626)
T ss_pred HhhcC-----ccEEecccccc
Confidence 54443 23567799994
No 119
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=78.83 E-value=5.5 Score=36.39 Aligned_cols=66 Identities=17% Similarity=0.098 Sum_probs=43.2
Q ss_pred cEEEEecCCCCHH--HHHHHHHhCCCCC-CCceeeccCccCCC-CCcHHHHHHHHHhhhhCCCcEEEecCCchhh
Q 022466 61 PIRICGDVHGQYQ--DLLRLFEHGGYPP-TANYLFLGDYVDRG-KQSLETICLLLAYKIRYPDKIHLLRGNHEDA 131 (297)
Q Consensus 61 ~i~vvGDIHG~~~--~L~~il~~~~~~~-~~~~vfLGD~VDrG-~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~ 131 (297)
+|.+||||=|.-- .+.+.|....... .+-++-.||-.--| .-+.++...|..+. -.+..+ ||||.-
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G----~D~iTl-GNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAG----VDVITM-GNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcC----CCEEEe-cccccC
Confidence 5889999999854 3455555543322 23444589988766 36777888776663 355555 999754
No 120
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=78.51 E-value=2.6 Score=46.65 Aligned_cols=66 Identities=23% Similarity=0.209 Sum_probs=38.6
Q ss_pred CcEEEEecCCCCHHH----------------HHHHHHhCCCC-CCCceeeccCccCCCCC--------------cHHHHH
Q 022466 60 APIRICGDVHGQYQD----------------LLRLFEHGGYP-PTANYLFLGDYVDRGKQ--------------SLETIC 108 (297)
Q Consensus 60 ~~i~vvGDIHG~~~~----------------L~~il~~~~~~-~~~~~vfLGD~VDrG~~--------------s~evl~ 108 (297)
-+|....|+||++.. +..+++..... ++.-+|-.||.+...+- ...++.
T Consensus 42 l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i~ 121 (1163)
T PRK09419 42 IQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMIK 121 (1163)
T ss_pred EEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHHH
Confidence 479999999998632 33344443322 23334449999986652 123444
Q ss_pred HHHHhhhhCCCcEEEecCCchh
Q 022466 109 LLLAYKIRYPDKIHLLRGNHED 130 (297)
Q Consensus 109 ll~~lk~~~p~~v~~lrGNHE~ 130 (297)
.+-.+. --....||||.
T Consensus 122 ~mN~lg-----yDa~~lGNHEF 138 (1163)
T PRK09419 122 AMNALG-----YDAGTLGNHEF 138 (1163)
T ss_pred HHhhcC-----ccEEeeccccc
Confidence 444432 33556899996
No 121
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=77.79 E-value=4 Score=37.72 Aligned_cols=93 Identities=18% Similarity=0.196 Sum_probs=54.1
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCeeee---------cCcEEEEecCCCCHHHHHHHHHhCCCCCCCceeeccCccCCCCC
Q 022466 32 QLSESEIRQLCVNARQIFLSQPNLVEV---------EAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQ 102 (297)
Q Consensus 32 ~~~~~~~~~l~~~~~~il~~ep~~l~~---------~~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~ 102 (297)
.++++....--+-++..-.-+|++-++ ..+.+.|+|.|+...+.. ..++.+-++-+||+-.-| .
T Consensus 25 ~~ssnpt~a~~~~~~~q~~~kp~vkpi~~~ap~~~~~~r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g-~ 97 (305)
T KOG3947|consen 25 EYSSNPTQAFTFYNKNQRRFKPPVKPIRLDAPVGPGYARFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLG-L 97 (305)
T ss_pred CcCCChHHHHHHHHHhcCcccCCCCCcCCCCCCCCCceEEEEecCcccccCccc------cCCCCceEEeccCCcccc-C
Confidence 445555444444444444445543333 146899999998555442 355566678899987755 3
Q ss_pred cHHHHHHHHHhhhhCC-CcEEEecCCchhhh
Q 022466 103 SLETICLLLAYKIRYP-DKIHLLRGNHEDAK 132 (297)
Q Consensus 103 s~evl~ll~~lk~~~p-~~v~~lrGNHE~~~ 132 (297)
+-||..+-..+- ..| ..=+.|+||||.-.
T Consensus 98 ~~ev~~fn~~~g-slph~yKIVIaGNHELtF 127 (305)
T KOG3947|consen 98 PEEVIKFNEWLG-SLPHEYKIVIAGNHELTF 127 (305)
T ss_pred HHHHHhhhHHhc-cCcceeeEEEeeccceee
Confidence 445544432221 122 34578999999854
No 122
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=76.18 E-value=3.4 Score=41.78 Aligned_cols=68 Identities=19% Similarity=0.047 Sum_probs=37.7
Q ss_pred cCcEEEEecCCCCHHH----------HHHHHHhCC-----CCCCCceeeccCccCCCCCc-----HHHHHHHHHhhhhCC
Q 022466 59 EAPIRICGDVHGQYQD----------LLRLFEHGG-----YPPTANYLFLGDYVDRGKQS-----LETICLLLAYKIRYP 118 (297)
Q Consensus 59 ~~~i~vvGDIHG~~~~----------L~~il~~~~-----~~~~~~~vfLGD~VDrG~~s-----~evl~ll~~lk~~~p 118 (297)
+-.|+-+.|+||++.. +..+++... ..++.-+|..||.+...+.+ ..++.++-.+ +
T Consensus 34 ~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~----g 109 (551)
T PRK09558 34 KITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLI----G 109 (551)
T ss_pred EEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcC----C
Confidence 3468899999998741 223333322 12344566799998643321 2233444333 2
Q ss_pred CcEEEecCCchhh
Q 022466 119 DKIHLLRGNHEDA 131 (297)
Q Consensus 119 ~~v~~lrGNHE~~ 131 (297)
-.+.. .||||.-
T Consensus 110 ~Da~t-lGNHEFD 121 (551)
T PRK09558 110 YDAMA-VGNHEFD 121 (551)
T ss_pred CCEEc-ccccccC
Confidence 34444 4999954
No 123
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=75.40 E-value=3 Score=41.06 Aligned_cols=26 Identities=23% Similarity=0.363 Sum_probs=21.7
Q ss_pred HHHHHHHHHCCCcEEEEcccccccch
Q 022466 233 DVVADFLDKNDLDLICRGHQVRHFHF 258 (297)
Q Consensus 233 ~~~~~fl~~~g~~~iIrgH~~~~~G~ 258 (297)
..++..+-+++++.++-||.-.-+..
T Consensus 322 ~~LE~l~~~~~VDvvf~GHvH~YER~ 347 (452)
T KOG1378|consen 322 EGLEPLFVKYKVDVVFWGHVHRYERF 347 (452)
T ss_pred HHHHHHHHHhceeEEEeccceehhcc
Confidence 46899999999999999998765553
No 124
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=73.59 E-value=9.7 Score=35.49 Aligned_cols=72 Identities=14% Similarity=0.226 Sum_probs=47.5
Q ss_pred CcEEEEecCCC----CHHHHHHHHHhCC-CCC----CCceeeccCccCCC----CCc----HHHHHHHHHh-hhhCC---
Q 022466 60 APIRICGDVHG----QYQDLLRLFEHGG-YPP----TANYLFLGDYVDRG----KQS----LETICLLLAY-KIRYP--- 118 (297)
Q Consensus 60 ~~i~vvGDIHG----~~~~L~~il~~~~-~~~----~~~~vfLGD~VDrG----~~s----~evl~ll~~l-k~~~p--- 118 (297)
..++|+||+|= .++.|.++|+... ..+ ..-+|++|+++-+. ..+ .+-++-|..+ ...+|
T Consensus 28 ~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L~ 107 (291)
T PTZ00235 28 HNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLIL 107 (291)
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHHH
Confidence 46899999994 4677888888662 222 34688999998663 222 2334444432 22344
Q ss_pred --CcEEEecCCchhh
Q 022466 119 --DKIHLLRGNHEDA 131 (297)
Q Consensus 119 --~~v~~lrGNHE~~ 131 (297)
.++++|+|-.|-.
T Consensus 108 ~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 108 EHCYLIFIPGINDPC 122 (291)
T ss_pred hcCeEEEECCCCCCC
Confidence 7899999999974
No 125
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=72.02 E-value=2.1 Score=42.22 Aligned_cols=41 Identities=24% Similarity=0.416 Sum_probs=33.3
Q ss_pred CceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhh
Q 022466 88 ANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKI 133 (297)
Q Consensus 88 ~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~ 133 (297)
+++=.+||+-||||++-.+++-|..+ ..+-+--||||...+
T Consensus 192 DhLHiVGDIyDRGP~pd~Imd~L~~y-----hsvDiQWGNHDilWm 232 (648)
T COG3855 192 DHLHIVGDIYDRGPYPDKIMDTLINY-----HSVDIQWGNHDILWM 232 (648)
T ss_pred hheeeecccccCCCCchHHHHHHhhc-----ccccccccCcceEEe
Confidence 45567999999999999999988765 266777899997554
No 126
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=71.57 E-value=5.8 Score=42.20 Aligned_cols=66 Identities=21% Similarity=0.098 Sum_probs=39.6
Q ss_pred CcEEEEecCCCCHHH----------------HHHHHHhCCC-CCCCceeeccCccCCCCCc--------------HHHHH
Q 022466 60 APIRICGDVHGQYQD----------------LLRLFEHGGY-PPTANYLFLGDYVDRGKQS--------------LETIC 108 (297)
Q Consensus 60 ~~i~vvGDIHG~~~~----------------L~~il~~~~~-~~~~~~vfLGD~VDrG~~s--------------~evl~ 108 (297)
-+|+-..|+||++.. +..+++.... .++.-+|-.||.+..-+.+ ..++.
T Consensus 116 LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i~ 195 (814)
T PRK11907 116 VRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMYA 195 (814)
T ss_pred EEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHHH
Confidence 468889999999642 2223333321 2334466699999764432 13566
Q ss_pred HHHHhhhhCCCcEEEecCCchh
Q 022466 109 LLLAYKIRYPDKIHLLRGNHED 130 (297)
Q Consensus 109 ll~~lk~~~p~~v~~lrGNHE~ 130 (297)
.+-.|. --....||||.
T Consensus 196 amN~LG-----yDA~tLGNHEF 212 (814)
T PRK11907 196 ALEALG-----FDAGTLGNHEF 212 (814)
T ss_pred HHhccC-----CCEEEechhhc
Confidence 655553 23567799995
No 127
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=71.03 E-value=6.8 Score=38.12 Aligned_cols=72 Identities=11% Similarity=0.038 Sum_probs=40.0
Q ss_pred CcEEEEecCC-CCHHHHH--HHHHhC-CCCCCCceeeccCccCCCCCcHH------HHHHHHHhhh-hCCCcEEEecCCc
Q 022466 60 APIRICGDVH-GQYQDLL--RLFEHG-GYPPTANYLFLGDYVDRGKQSLE------TICLLLAYKI-RYPDKIHLLRGNH 128 (297)
Q Consensus 60 ~~i~vvGDIH-G~~~~L~--~il~~~-~~~~~~~~vfLGD~VDrG~~s~e------vl~ll~~lk~-~~p~~v~~lrGNH 128 (297)
-+.+++||-= |...... +.+... ...+.+-+|-+||-++.|..++. .++-+..-+. .-.-.++.+.|||
T Consensus 27 l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLGNH 106 (394)
T PTZ00422 27 LRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQA 106 (394)
T ss_pred EEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCCcc
Confidence 4789999953 3322211 222222 22344556679998888876543 2333332211 0123789999999
Q ss_pred hhh
Q 022466 129 EDA 131 (297)
Q Consensus 129 E~~ 131 (297)
|..
T Consensus 107 Dy~ 109 (394)
T PTZ00422 107 DWD 109 (394)
T ss_pred ccc
Confidence 973
No 128
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=69.37 E-value=13 Score=34.04 Aligned_cols=87 Identities=15% Similarity=0.150 Sum_probs=44.4
Q ss_pred CceeeccCccCCCCC------------------cHHHHHHHHHhhhh--CCCcEEEecCCchhhhhHhhh-cChHHHHHH
Q 022466 88 ANYLFLGDYVDRGKQ------------------SLETICLLLAYKIR--YPDKIHLLRGNHEDAKINRIY-GFYDECKRR 146 (297)
Q Consensus 88 ~~~vfLGD~VDrG~~------------------s~evl~ll~~lk~~--~p~~v~~lrGNHE~~~~~~~~-gf~~e~~~~ 146 (297)
.++|..||.|+.-.. ..+.+..+-.+-.+ .--.|.+++||||-....... .+...+..+
T Consensus 44 ~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~l~~l~~~i~V~imPG~~Dp~~~~lPQqplh~~lfp~ 123 (257)
T cd07387 44 VRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAVKELDNFLSQLASSVPVDLMPGEFDPANHSLPQQPLHRCLFPK 123 (257)
T ss_pred EEEEEECCcccccccccchhhhhhccccccchhhHHHHHHHHHHHHhhhcCCeEEECCCCCCcccccCCCCCCCHHHhhc
Confidence 368899999986432 12223222222212 223699999999987654322 122221100
Q ss_pred HHHHHHHHHHHHhhcCCeEEEEcC-cEEEecCC
Q 022466 147 FNVRLWKIFTDCFNCLPVAALINE-KILCMHGG 178 (297)
Q Consensus 147 ~~~~~~~~~~~~~~~LPl~a~i~~-~il~vHgG 178 (297)
- ..+. .=.+-+=|....+++ +++.+||-
T Consensus 124 s--~~~~--~~~~vtNP~~~~i~g~~vLgtsGq 152 (257)
T cd07387 124 S--SNYS--TLNLVTNPYEFSIDGVRVLGTSGQ 152 (257)
T ss_pred c--cccC--CcEEeCCCeEEEECCEEEEEECCC
Confidence 0 0000 011334477777766 57778883
No 129
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=67.74 E-value=10 Score=38.52 Aligned_cols=65 Identities=22% Similarity=0.056 Sum_probs=37.2
Q ss_pred EEEEecCCCCHHH---------------------HHHHHHhCCC-CCCCceeeccCccCCCCCc-----HHHHHHHHHhh
Q 022466 62 IRICGDVHGQYQD---------------------LLRLFEHGGY-PPTANYLFLGDYVDRGKQS-----LETICLLLAYK 114 (297)
Q Consensus 62 i~vvGDIHG~~~~---------------------L~~il~~~~~-~~~~~~vfLGD~VDrG~~s-----~evl~ll~~lk 114 (297)
|.-+.|+||++.. +..+++.... .++.-++..||.+...+.+ ...+.++-++.
T Consensus 3 ILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g 82 (550)
T TIGR01530 3 IIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAAG 82 (550)
T ss_pred EEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhccC
Confidence 5667888887543 3333433321 2345566799998765432 23344444443
Q ss_pred hhCCCcEEEecCCchhh
Q 022466 115 IRYPDKIHLLRGNHEDA 131 (297)
Q Consensus 115 ~~~p~~v~~lrGNHE~~ 131 (297)
--....||||.-
T Consensus 83 -----~Da~~lGNHEFd 94 (550)
T TIGR01530 83 -----FDFFTLGNHEFD 94 (550)
T ss_pred -----CCEEEecccccc
Confidence 346778999953
No 130
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=62.72 E-value=0.24 Score=47.66 Aligned_cols=95 Identities=8% Similarity=-0.162 Sum_probs=69.1
Q ss_pred CCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhHhhhcChHHHHHHH----HHHHHHHHHHHhhcC
Q 022466 87 TANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRF----NVRLWKIFTDCFNCL 162 (297)
Q Consensus 87 ~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~----~~~~~~~~~~~~~~L 162 (297)
.-..|+++++.+++.+.++.+.+-...+..+..+....++||+.. +++++++.-.. ...+++..++-++..
T Consensus 48 ~latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~-----~~~R~~LVlp~l~S~riyvid~~~ep~~~~ 122 (476)
T KOG0918|consen 48 YLATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDS-----SFKRRYLVLPSLNSGRIYVIDVKTEPRKPS 122 (476)
T ss_pred ceeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCc-----chhhhheeecccccCceEEEEeccCcCccc
Confidence 345789999999999999999998888888888999999999543 22222211111 123455667777777
Q ss_pred CeEEEEcCcEEEecCCCCCCCCChH
Q 022466 163 PVAALINEKILCMHGGLSPELENLD 187 (297)
Q Consensus 163 Pl~a~i~~~il~vHgGi~p~~~~l~ 187 (297)
+..++.+ ++++.||+..|......
T Consensus 123 l~k~i~~-~il~~~~l~~Pht~hcl 146 (476)
T KOG0918|consen 123 LEKTIDP-DILEKTGLACPHTSHCL 146 (476)
T ss_pred eeeeech-hhHhhcCCcCCcccccc
Confidence 8886665 89999999999765433
No 131
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=60.41 E-value=12 Score=39.65 Aligned_cols=67 Identities=18% Similarity=0.085 Sum_probs=39.5
Q ss_pred cCcEEEEecCCCCHHH----------------HHHHHHhCCC-CCCCceeeccCccCCCCC-------------------
Q 022466 59 EAPIRICGDVHGQYQD----------------LLRLFEHGGY-PPTANYLFLGDYVDRGKQ------------------- 102 (297)
Q Consensus 59 ~~~i~vvGDIHG~~~~----------------L~~il~~~~~-~~~~~~vfLGD~VDrG~~------------------- 102 (297)
.-+|+-..|+||++.. +..++++... .++..+|-.||++-.-+.
T Consensus 39 ~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~~ 118 (780)
T PRK09418 39 NLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPSY 118 (780)
T ss_pred EEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhccccccccccccc
Confidence 4579999999999632 2233333321 234456669998854332
Q ss_pred cHHHHHHHHHhhhhCCCcEEEecCCchh
Q 022466 103 SLETICLLLAYKIRYPDKIHLLRGNHED 130 (297)
Q Consensus 103 s~evl~ll~~lk~~~p~~v~~lrGNHE~ 130 (297)
...++.++-.+. -=....||||.
T Consensus 119 ~~p~i~~mN~lg-----yDa~tlGNHEF 141 (780)
T PRK09418 119 THPLYRLMNLMK-----YDVISLGNHEF 141 (780)
T ss_pred chHHHHHHhccC-----CCEEecccccc
Confidence 134555555553 23566799994
No 132
>COG4077 Uncharacterized protein conserved in archaea [Function unknown]
Probab=51.78 E-value=12 Score=30.72 Aligned_cols=40 Identities=28% Similarity=0.411 Sum_probs=27.5
Q ss_pred cCCCCHHHHHHHHHhCCCCC-------CCceeeccCccCC---CCCcHHHH
Q 022466 67 DVHGQYQDLLRLFEHGGYPP-------TANYLFLGDYVDR---GKQSLETI 107 (297)
Q Consensus 67 DIHG~~~~L~~il~~~~~~~-------~~~~vfLGD~VDr---G~~s~evl 107 (297)
|.-| +..|++-|+..|..- .+.-||+-=|.|| ||.++|++
T Consensus 101 d~~G-feRlKeslE~~gc~~~Y~~~~~d~~gvfv~~y~Drsg~gPkfVE~v 150 (156)
T COG4077 101 DTFG-FERLKESLEMIGCECDYVIAKKDNIGVFVCMYFDRSGKGPKFVEVV 150 (156)
T ss_pred Ccch-HHHHHHHHHHcCceEEEEEEecccceEEEEEEeccCCCCCceEEEE
Confidence 4555 888899999988742 3345666667787 67776654
No 133
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=48.11 E-value=1.8e+02 Score=25.13 Aligned_cols=79 Identities=19% Similarity=0.215 Sum_probs=59.0
Q ss_pred ccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEecCCCCHHHHHHHHHhCCCCC----------------------
Q 022466 29 KQVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPP---------------------- 86 (297)
Q Consensus 29 ~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~vvGDIHG~~~~L~~il~~~~~~~---------------------- 86 (297)
+...++++++.+-+.++.+.+.++..= ...++||=++|++--+-.++..+.++.
T Consensus 8 ~evLisee~I~~ri~ela~~I~~~y~g----~~~~vv~iLkGs~~F~~dL~r~i~~~~e~dFm~vSSYg~~t~ssg~v~i 83 (178)
T COG0634 8 KEVLISEEQIKARIKELAAQITEDYGG----KDPLVVGVLKGSFPFMADLIRAIDFPLEVDFMHVSSYGGGTSSSGEVKI 83 (178)
T ss_pred ceEeeCHHHHHHHHHHHHHHHHHhhCC----CceEEEEEcccchhhHHHHHHhcCCCceeEEEEEeccCCCcccCCceEE
Confidence 345788999999888888887776542 577889999999988887777665432
Q ss_pred ---------CCceeeccCccCCCCCcHHHHHHHH
Q 022466 87 ---------TANYLFLGDYVDRGKQSLETICLLL 111 (297)
Q Consensus 87 ---------~~~~vfLGD~VDrG~~s~evl~ll~ 111 (297)
..+++.+=|++|-|..=-.+.++|.
T Consensus 84 ~kDld~di~grdVLiVeDIiDsG~TLs~i~~~l~ 117 (178)
T COG0634 84 LKDLDEDIKGRDVLIVEDIIDSGLTLSKVRDLLK 117 (178)
T ss_pred ecccccCCCCCeEEEEecccccChhHHHHHHHHH
Confidence 1357889999999976666666553
No 134
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=44.91 E-value=65 Score=23.80 Aligned_cols=73 Identities=15% Similarity=0.068 Sum_probs=47.1
Q ss_pred eeecCcEEEEecCCCCHHHHHHHHHhCCC--CCCCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCc
Q 022466 56 VEVEAPIRICGDVHGQYQDLLRLFEHGGY--PPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNH 128 (297)
Q Consensus 56 l~~~~~i~vvGDIHG~~~~L~~il~~~~~--~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNH 128 (297)
+.....+.|+=|---|.+.+..+++.+.. +....++.+|+.-|+|..+.+....+..+...+...+++...|+
T Consensus 8 v~~~~~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 82 (91)
T PF02875_consen 8 VREPNGPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDNP 82 (91)
T ss_dssp EEEETTEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSBT
T ss_pred EeeCCCcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCCC
Confidence 33334577788877788888888876642 34555678999999888877766666666555566655555554
No 135
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=43.21 E-value=21 Score=36.64 Aligned_cols=25 Identities=24% Similarity=0.403 Sum_probs=22.5
Q ss_pred CHHHHHHHHHHCCCc----EEEEcccccc
Q 022466 231 GSDVVADFLDKNDLD----LICRGHQVRH 255 (297)
Q Consensus 231 g~~~~~~fl~~~g~~----~iIrgH~~~~ 255 (297)
.++..++.|+..|++ .||-||+||.
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk 535 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVK 535 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccc
Confidence 577788999999998 9999999987
No 136
>PF15007 CEP44: Centrosomal spindle body, CEP44
Probab=41.67 E-value=25 Score=28.85 Aligned_cols=22 Identities=23% Similarity=0.409 Sum_probs=19.8
Q ss_pred cCCCCHHHHHHHHHhCCCCCCC
Q 022466 67 DVHGQYQDLLRLFEHGGYPPTA 88 (297)
Q Consensus 67 DIHG~~~~L~~il~~~~~~~~~ 88 (297)
||.|++..|++.|+.+++|..-
T Consensus 1 Dl~~~l~~L~~~Lr~~~yp~~v 22 (131)
T PF15007_consen 1 DLKGNLRRLEQELRSLKYPDEV 22 (131)
T ss_pred ChhhHHHHHHHHHHHCCCCCcc
Confidence 8999999999999999999543
No 137
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=40.24 E-value=73 Score=32.45 Aligned_cols=52 Identities=21% Similarity=0.201 Sum_probs=39.4
Q ss_pred CcEEEEecCCC------------CHHHHHHHHHhCCCCCCCceeeccCccCCCCCcHHHHHHHH
Q 022466 60 APIRICGDVHG------------QYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLL 111 (297)
Q Consensus 60 ~~i~vvGDIHG------------~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~ 111 (297)
.||.|-.|.|= .+..|..+|..+.-...+-++.=||++.--.-|..+|.-.+
T Consensus 14 irILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~i 77 (646)
T KOG2310|consen 14 IRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRCL 77 (646)
T ss_pred eEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHHH
Confidence 58899999992 35788899988877777778888999987776666654433
No 138
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=37.82 E-value=40 Score=32.05 Aligned_cols=60 Identities=18% Similarity=0.372 Sum_probs=39.6
Q ss_pred HhhCCCeeeecCcEEEEecCC-CCHHHHHHHHHhCCCCCCCceee-ccCccC--CCCCcHHHHHHHHHhhhh
Q 022466 49 FLSQPNLVEVEAPIRICGDVH-GQYQDLLRLFEHGGYPPTANYLF-LGDYVD--RGKQSLETICLLLAYKIR 116 (297)
Q Consensus 49 l~~ep~~l~~~~~i~vvGDIH-G~~~~L~~il~~~~~~~~~~~vf-LGD~VD--rG~~s~evl~ll~~lk~~ 116 (297)
++.-|-.++-.+.+.|+||.| |||.++... +..++| .-|+=. -|+...++++++.+|...
T Consensus 46 ~~~~p~~lp~~p~tw~cGD~HLgN~ga~~~~--------~G~V~f~i~DFDe~~~g~~~~DlvRl~~Sl~~a 109 (410)
T COG4320 46 MKTWPWSLPKTPFTWLCGDAHLGNFGAARNS--------KGNVVFKIADFDEGHLGQYIWDLVRLAVSLVLA 109 (410)
T ss_pred HhcCccccCCCCceEEecccccccchhhccC--------CCceEEEecccchhhccchHHHHHHHHHHHHHH
Confidence 345565677678899999999 888776432 233444 555421 267778888888877643
No 139
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=36.87 E-value=1.2e+02 Score=29.83 Aligned_cols=67 Identities=13% Similarity=0.029 Sum_probs=47.8
Q ss_pred cCcEEEEecCCC-CHHHHHHHHHhCCCCCCCceeeccCccCCCCCcHHHHHHHHHhhhhCC-CcEEEecC
Q 022466 59 EAPIRICGDVHG-QYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYP-DKIHLLRG 126 (297)
Q Consensus 59 ~~~i~vvGDIHG-~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p-~~v~~lrG 126 (297)
...+.||=|-|. +.+.+.++|+.+...+..+++.+||+...|+.+.+...-+...-...+ +.+++ -|
T Consensus 324 ~~g~~iIDDsYn~nP~s~~aaL~~l~~~~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~~-~G 392 (453)
T PRK10773 324 AEGQLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVLS-VG 392 (453)
T ss_pred CCCeEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEEE-EC
Confidence 345788999554 688888888776543445788999999999999988877765544443 44544 46
No 140
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=36.65 E-value=1.6e+02 Score=24.84 Aligned_cols=102 Identities=17% Similarity=0.257 Sum_probs=59.3
Q ss_pred EEEecCCCCHHHHHHHHHh-CCC------------CCCCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCch
Q 022466 63 RICGDVHGQYQDLLRLFEH-GGY------------PPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHE 129 (297)
Q Consensus 63 ~vvGDIHG~~~~L~~il~~-~~~------------~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE 129 (297)
++.+=.+||-..+.+.+.. ++- ..+.++||+|=-+|+|.-+-++..+|-.|+ +.+|++. |..
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~---~KkV~lF-~T~- 76 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLK---GKKVALF-GTA- 76 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHcc---CCeEEEE-Eec-
Confidence 4455567777776654432 222 234679999999999999999999998875 4455442 221
Q ss_pred hhhhHhhhcChHHHHHHHHHHHHHHHHHHhhcCCeEEEEcCcEEEecCCCCCCC
Q 022466 130 DAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPEL 183 (297)
Q Consensus 130 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~LPl~a~i~~~il~vHgGi~p~~ 183 (297)
|+.. ...|...+.+....++..= ..+- ..++|+|-++|.+
T Consensus 77 --------G~~~--~s~~~~~~~~~~~~~~~~~---~~~l-g~f~CqGk~~~~~ 116 (160)
T PF12641_consen 77 --------GAGP--DSEYAKKILKNVEALLPKG---NEIL-GTFMCQGKMDPKV 116 (160)
T ss_pred --------CCCC--chHHHHHHHHHHHHhhccC---Ceec-ceEEeCCcCCHHH
Confidence 1111 1122223333333333332 2222 2788899998854
No 141
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=31.51 E-value=29 Score=31.91 Aligned_cols=39 Identities=23% Similarity=0.416 Sum_probs=25.6
Q ss_pred ceeeccCccCCCCCcHH-HHHHHHHhhhhCCCcEEEecCCchhh
Q 022466 89 NYLFLGDYVDRGKQSLE-TICLLLAYKIRYPDKIHLLRGNHEDA 131 (297)
Q Consensus 89 ~~vfLGD~VDrG~~s~e-vl~ll~~lk~~~p~~v~~lrGNHE~~ 131 (297)
+++|+||+|.+ ...+ +-..|-.+|.+++..+++. |=|..
T Consensus 2 ~ilfiGDi~G~--~Gr~~l~~~L~~lk~~~~~D~vIa--NgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVYGK--AGRKIVKNNLPQLKSKYQADLVIA--NGENT 41 (266)
T ss_pred eEEEEEecCCH--HHHHHHHHHHHHHHHhCCCCEEEE--cCccc
Confidence 58999999955 2222 2356777888887776665 44543
No 142
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=30.61 E-value=40 Score=30.78 Aligned_cols=37 Identities=24% Similarity=0.333 Sum_probs=26.4
Q ss_pred ceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecC
Q 022466 89 NYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRG 126 (297)
Q Consensus 89 ~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrG 126 (297)
+++|+||+|.+.-.. -+...|-.+|.+++..+++.-|
T Consensus 1 ~ilfigdi~g~~G~~-~~~~~l~~lk~~~~~D~vi~Ng 37 (255)
T cd07382 1 KILFIGDIVGKPGRK-AVKEHLPKLKKEYKIDFVIANG 37 (255)
T ss_pred CEEEEEeCCCHHHHH-HHHHHHHHHHHHCCCCEEEECC
Confidence 478999999875433 3456677888888777666544
No 143
>PRK10853 putative reductase; Provisional
Probab=30.08 E-value=1.9e+02 Score=22.98 Aligned_cols=57 Identities=25% Similarity=0.440 Sum_probs=30.8
Q ss_pred ccCChHHHHHHHHHH-----HcCCCCccccCCHHHHHHH--HHHHHHHHhhCCCeeeecCcEEEEe
Q 022466 8 GMMDKVVLDDIIRRL-----LEGRGGKQVQLSESEIRQL--CVNARQIFLSQPNLVEVEAPIRICG 66 (297)
Q Consensus 8 ~~~~~~~~~~~i~~~-----~~~~~~~~~~~~~~~~~~l--~~~~~~il~~ep~~l~~~~~i~vvG 66 (297)
.-++.+.|.+++..+ ++.+......+..++-..+ .+++.+++..+|.+++ .||++.+
T Consensus 35 ~p~s~~eL~~~l~~~g~~~l~n~~~~~~r~L~~~~k~~~~~~~e~~~ll~~~P~Lik--RPIv~~~ 98 (118)
T PRK10853 35 DGLDSELLQGFIDELGWEALLNTRGTTWRKLDETQRNAITDAASAAALMLEQPAIIK--RPLLCAP 98 (118)
T ss_pred CCcCHHHHHHHHHHcCHHHHHhcCCchHHhCCHhHhhcCCCHHHHHHHHHhCcCeee--ccEEEeC
Confidence 336777777777543 2222111222333322122 2667888888888887 4666654
No 144
>PF09893 DUF2120: Uncharacterized protein conserved in archaea (DUF2120); InterPro: IPR014515 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=29.04 E-value=52 Score=27.46 Aligned_cols=23 Identities=30% Similarity=0.403 Sum_probs=17.8
Q ss_pred EEEEecCCCCHHHHHHHHHhCCCC
Q 022466 62 IRICGDVHGQYQDLLRLFEHGGYP 85 (297)
Q Consensus 62 i~vvGDIHG~~~~L~~il~~~~~~ 85 (297)
.=+..|-+| +..|++-|+..|..
T Consensus 90 s~~~~D~~G-ferlKesfE~mGc~ 112 (146)
T PF09893_consen 90 SDIYPDEFG-FERLKESFEAMGCE 112 (146)
T ss_pred CccchhhhH-HHHHHHHHHhcCce
Confidence 344567777 89999999998874
No 145
>TIGR03439 methyl_EasF probable methyltransferase domain, EasF family. This model represents an uncharacterized domain of about 300 amino acids with homology to S-adenosylmethionine-dependent methyltransferases. Proteins with this domain are exclusively fungal. A few, such as EasF from Neotyphodium lolii, are associated with the biosynthesis of ergot alkaloids, a class of fungal secondary metabolites. EasF may, in fact, be the AdoMet:dimethylallyltryptophan N-methyltransferase, the enzyme that follows tryptophan dimethylallyltransferase (DMATS) in ergot alkaloid biosynthesis. Several other members of this family, including mug158 (meiotically up-regulated gene 158 protein) from Schizosaccharomyces pombe, contain an additional uncharacterized domain DUF323 (pfam03781).
Probab=28.57 E-value=5.1e+02 Score=24.45 Aligned_cols=97 Identities=21% Similarity=0.314 Sum_probs=58.3
Q ss_pred EEEEecCCCCHHHHHHHHHhCCCCC-CCceeeccCccCCCCCcHHHHHHHHHhhh--hCCCcEEEe--cCCchhhhhHhh
Q 022466 62 IRICGDVHGQYQDLLRLFEHGGYPP-TANYLFLGDYVDRGKQSLETICLLLAYKI--RYPDKIHLL--RGNHEDAKINRI 136 (297)
Q Consensus 62 i~vvGDIHG~~~~L~~il~~~~~~~-~~~~vfLGD~VDrG~~s~evl~ll~~lk~--~~p~~v~~l--rGNHE~~~~~~~ 136 (297)
+.|.| |+|+|.+....+.....+. ...++|+|--+.- -...|...+|..+.. ..|+..++| =+..+...+...
T Consensus 132 l~v~~-l~gdy~~~l~~l~~~~~~~~~r~~~flGSsiGN-f~~~ea~~fL~~~~~~~l~~~d~lLiG~D~~k~~~~l~~A 209 (319)
T TIGR03439 132 VRCAG-LLGTYDDGLAWLKRPENRSRPTTILWLGSSIGN-FSRPEAAAFLAGFLATALSPSDSFLIGLDGCKDPDKVLRA 209 (319)
T ss_pred eEEEE-EEecHHHHHhhcccccccCCccEEEEeCccccC-CCHHHHHHHHHHHHHhhCCCCCEEEEecCCCCCHHHHHHH
Confidence 44444 8899999888775422222 3446689977643 345667777766654 356555444 345555556666
Q ss_pred hcChHHHHHHHHHHHHHHHHHHhh
Q 022466 137 YGFYDECKRRFNVRLWKIFTDCFN 160 (297)
Q Consensus 137 ~gf~~e~~~~~~~~~~~~~~~~~~ 160 (297)
|.-.....+.|+..+...+++.+.
T Consensus 210 Y~d~~gvTa~FnlN~L~~~Nr~Lg 233 (319)
T TIGR03439 210 YNDPGGVTRRFVLNGLVHANEILG 233 (319)
T ss_pred hcCCcchhHHHHHHHHHHHHHHhC
Confidence 655555566676666666665554
No 146
>COG0770 MurF UDP-N-acetylmuramyl pentapeptide synthase [Cell envelope biogenesis, outer membrane]
Probab=27.65 E-value=2.8e+02 Score=27.52 Aligned_cols=74 Identities=16% Similarity=0.158 Sum_probs=55.0
Q ss_pred CcEEEEec-CCCCHHHHHHHHHhCCCCCCCc-eeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCchhhhhH
Q 022466 60 APIRICGD-VHGQYQDLLRLFEHGGYPPTAN-YLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKIN 134 (297)
Q Consensus 60 ~~i~vvGD-IHG~~~~L~~il~~~~~~~~~~-~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~ 134 (297)
..+.+|-| ..++.+.+...++.....+..+ ++.|||+..=|.+|.++-.-+.+.-....-...++-|. +...+.
T Consensus 326 ~g~~iIdD~YNAnp~sm~aai~~l~~~~~~~~i~VlGdM~ELG~~s~~~H~~v~~~~~~~~~d~v~~~G~-~~~~i~ 401 (451)
T COG0770 326 NGKTLIDDSYNANPDSMRAALDLLAALPGRKGIAVLGDMLELGEESEELHEEVGEYAVEAGIDLVFLVGE-LSKAIA 401 (451)
T ss_pred CCcEEEEcCCCCCHHHHHHHHHHHhhCccCCcEEEeCChhhhCccHHHHHHHHHHHHHhcCceEEEEEcc-chHHHH
Confidence 44455555 5689999999998877666555 78999999999999998888877766554467777787 444443
No 147
>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.
Probab=27.58 E-value=1.6e+02 Score=22.78 Aligned_cols=23 Identities=26% Similarity=0.561 Sum_probs=15.8
Q ss_pred HHHHHHHhhCCCeeeecCcEEEEec
Q 022466 43 VNARQIFLSQPNLVEVEAPIRICGD 67 (297)
Q Consensus 43 ~~~~~il~~ep~~l~~~~~i~vvGD 67 (297)
+++.+++..+|.+++ .||++.|+
T Consensus 75 ~e~~~~l~~~p~Lik--RPIi~~~~ 97 (105)
T cd03035 75 AKAIALMLEHPSLIK--RPVLETGG 97 (105)
T ss_pred HHHHHHHHhCcCeee--cceEEeCC
Confidence 566777888888877 46665443
No 148
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=26.93 E-value=1.7e+02 Score=22.76 Aligned_cols=36 Identities=22% Similarity=0.505 Sum_probs=24.9
Q ss_pred CCCCCCceeeccCccCCCCCcHHHHHHHHHhhhhCCCcEEEe
Q 022466 83 GYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLL 124 (297)
Q Consensus 83 ~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~l 124 (297)
..-|+.++|++|| -|....|+..-+. ..+|+++..+
T Consensus 60 ~~fP~~kfiLIGD---sgq~DpeiY~~ia---~~~P~~i~ai 95 (100)
T PF09949_consen 60 RDFPERKFILIGD---SGQHDPEIYAEIA---RRFPGRILAI 95 (100)
T ss_pred HHCCCCcEEEEee---CCCcCHHHHHHHH---HHCCCCEEEE
Confidence 3456778899998 4666677777653 3488887654
No 149
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=26.88 E-value=2.9e+02 Score=25.29 Aligned_cols=57 Identities=23% Similarity=0.284 Sum_probs=31.2
Q ss_pred CCcEEEecCCchhhhhHhhhcChHHHH-HHH-HHHHHHHHHHHhhcCCeEEEEc-CcEEEecCCCCC
Q 022466 118 PDKIHLLRGNHEDAKINRIYGFYDECK-RRF-NVRLWKIFTDCFNCLPVAALIN-EKILCMHGGLSP 181 (297)
Q Consensus 118 p~~v~~lrGNHE~~~~~~~~gf~~e~~-~~~-~~~~~~~~~~~~~~LPl~a~i~-~~il~vHgGi~p 181 (297)
..+|++|-||||.-. ++.|.- ... .+. ..+.| ..+..+|++-.-. .+++-.|-||-.
T Consensus 127 nknvvvlagnhein~-ngny~a--rlanhkls~gDTY----nlIKtldVC~YD~erkvltsHHGIir 186 (318)
T PF13258_consen 127 NKNVVVLAGNHEINF-NGNYMA--RLANHKLSAGDTY----NLIKTLDVCNYDPERKVLTSHHGIIR 186 (318)
T ss_pred ccceEEEecCceecc-CchHHH--HHhhCCCCccchh----hccccccccccCcchhhhhcccCcee
Confidence 368999999999742 333310 000 000 11222 2356677764433 258888888864
No 150
>COG3207 DIT1 Pyoverdine/dityrosine biosynthesis protein [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=25.22 E-value=1.3e+02 Score=27.98 Aligned_cols=41 Identities=29% Similarity=0.344 Sum_probs=28.9
Q ss_pred eeecCcEEEEecCCC-------------CH-HHHHHHHHhCCCCCCCceeeccCc
Q 022466 56 VEVEAPIRICGDVHG-------------QY-QDLLRLFEHGGYPPTANYLFLGDY 96 (297)
Q Consensus 56 l~~~~~i~vvGDIHG-------------~~-~~L~~il~~~~~~~~~~~vfLGD~ 96 (297)
.+..++|+|++|=|- .| ++|..+.+..+.+...+++++||.
T Consensus 102 Y~PG~ki~I~SDghvFsD~I~Vdddh~s~Y~d~Lr~m~~~i~~~~i~kI~n~e~~ 156 (330)
T COG3207 102 YAPGAKITICSDGHVFSDLIRVDDDHISAYQDALRLMIEEIGATHIGKIFNLEDV 156 (330)
T ss_pred cCCCCEEEEEeCCceehhhccccchhHHHHHHHHHHHHHHcCCCCccceeecchh
Confidence 344578888888772 22 345667788888888888998873
No 151
>PRK11534 DNA-binding transcriptional regulator CsiR; Provisional
Probab=24.39 E-value=4.6e+02 Score=22.60 Aligned_cols=73 Identities=14% Similarity=0.097 Sum_probs=50.1
Q ss_pred cccccccCChHHHHHHHHHHHcC--CCCccccCCHHHHHH-------HHHHHHHHHhhCCCeeeecCcEEEEecCCCCHH
Q 022466 3 MMTMEGMMDKVVLDDIIRRLLEG--RGGKQVQLSESEIRQ-------LCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQ 73 (297)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~-------l~~~~~~il~~ep~~l~~~~~i~vvGDIHG~~~ 73 (297)
|+++.+-....-.+.+-+.++++ .+|. .|++.++.+ -+.+|...|..+.-|...+.+=+.|..+ +..
T Consensus 1 ~~~~~~~~~~~vy~~i~~~I~~g~l~pG~--~L~e~eLae~lgVSRtpVREAL~~L~~eGlv~~~~~~G~~V~~~--~~~ 76 (224)
T PRK11534 1 MTAPMQITALDGYRWLKNDIIRGNFQPDE--KLRMSLLTSRYALGVGPLREALSQLVAERLVTVVNQKGYRVASM--SEQ 76 (224)
T ss_pred CchhHHhhhHHHHHHHHHHHHhCCCCCCC--cCCHHHHHHHHCCChHHHHHHHHHHHHCCCEEEeCCCceEeCCC--CHH
Confidence 67777777777778888888877 4554 556666665 4678999999998887776664555555 344
Q ss_pred HHHHHH
Q 022466 74 DLLRLF 79 (297)
Q Consensus 74 ~L~~il 79 (297)
++..++
T Consensus 77 ~~~ei~ 82 (224)
T PRK11534 77 ELLDIF 82 (224)
T ss_pred HHHHHH
Confidence 444444
No 152
>PF05046 Img2: Mitochondrial large subunit ribosomal protein (Img2); InterPro: IPR007740 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family of proteins has been identified as part of the mitochondrial large ribosomal subunit in Saccharomyces cerevisiae [].; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome
Probab=22.28 E-value=2.4e+02 Score=21.20 Aligned_cols=16 Identities=19% Similarity=0.360 Sum_probs=7.2
Q ss_pred EEEEecCCCCHHHHHH
Q 022466 62 IRICGDVHGQYQDLLR 77 (297)
Q Consensus 62 i~vvGDIHG~~~~L~~ 77 (297)
+++|=-|+||..+|.+
T Consensus 28 ~T~IrkI~GD~~aL~~ 43 (87)
T PF05046_consen 28 ITVIRKIEGDIWALKK 43 (87)
T ss_pred EEEEEeecCCHHHHHH
Confidence 3444444444444443
No 153
>COG3357 Predicted transcriptional regulator containing an HTH domain fused to a Zn-ribbon [Transcription]
Probab=21.31 E-value=1.1e+02 Score=23.47 Aligned_cols=41 Identities=20% Similarity=0.338 Sum_probs=34.9
Q ss_pred HHHHHHHHHCCCcEEEEcccccccchhccccccccCCccee
Q 022466 233 DVVADFLDKNDLDLICRGHQVRHFHFEHADYSFTISRSCKV 273 (297)
Q Consensus 233 ~~~~~fl~~~g~~~iIrgH~~~~~G~~~~~~~~s~~~~c~v 273 (297)
..+.+.+++-|-.++++--.+..=||+|.+...-.++.|.-
T Consensus 41 ~hiak~lkr~g~~Llv~Pa~CkkCGfef~~~~ik~pSRCP~ 81 (97)
T COG3357 41 EHIAKSLKRKGKRLLVRPARCKKCGFEFRDDKIKKPSRCPK 81 (97)
T ss_pred HHHHHHHHhCCceEEecChhhcccCccccccccCCcccCCc
Confidence 45678899999999999999999999999977777777654
No 154
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=21.11 E-value=1.1e+02 Score=27.98 Aligned_cols=12 Identities=17% Similarity=0.271 Sum_probs=7.5
Q ss_pred HHHHHHHHHHCC
Q 022466 232 SDVVADFLDKND 243 (297)
Q Consensus 232 ~~~~~~fl~~~g 243 (297)
+..+++||....
T Consensus 212 e~~i~rFl~~~p 223 (266)
T COG1692 212 EEPIKRFLTGLP 223 (266)
T ss_pred hHHHHHHHhCCC
Confidence 345677777655
No 155
>PLN02965 Probable pheophorbidase
Probab=20.83 E-value=3.2e+02 Score=23.77 Aligned_cols=21 Identities=19% Similarity=0.268 Sum_probs=17.0
Q ss_pred HHHHHHHHHCCC--cEEEEcccc
Q 022466 233 DVVADFLDKNDL--DLICRGHQV 253 (297)
Q Consensus 233 ~~~~~fl~~~g~--~~iIrgH~~ 253 (297)
+.+.++++..+. +.++.||..
T Consensus 59 ~dl~~~l~~l~~~~~~~lvGhSm 81 (255)
T PLN02965 59 RPLFALLSDLPPDHKVILVGHSI 81 (255)
T ss_pred HHHHHHHHhcCCCCCEEEEecCc
Confidence 447788998875 799999986
No 156
>PF06861 BALF1: BALF1 protein; InterPro: IPR010677 Epstein-Barr virus (strain GD1) (HHV-4), a human tumour DNA virus and a prominent member of gamma-herpesviruses, encodes homologues of cellular antiapoptotic viral Bcl-2 proteins BALF1 and BHRF1. They protect the virus from apoptosis in its host cell during virus synthesis [, ]. The virus infects B lymphocytes to establish a latent infection and yield proliferating, growth-transformed B cells in vitro. Bcl-2 genes are essential for the initial evasion of apoptosis which allows it to establish a latent infection or cause cellular transformation, or both []. Bcl-2 family proteins can inhibit or induce programmed cell death in part by counteracting the activity of other BCL-2 family members. BALF1, inhibits the antiapoptotic activity of EBV BHRF1 and of KSBcl-2 in several transfected cell lines. BALF1 fails, however, to inhibit the cellular BCL-2 family member, BCL-x(L). Thus, BALF1 acts as a negative regulator of the survival function of BHRF1, similar to the counterbalance observed between cellular BCL-2 family members [].
Probab=20.65 E-value=1.8e+02 Score=25.07 Aligned_cols=83 Identities=22% Similarity=0.207 Sum_probs=52.1
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEecCCCCHHHHHHHHHhCCCCCCCceeeccCccCCCCCcHHHHHHHH
Q 022466 32 QLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLL 111 (297)
Q Consensus 32 ~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~ 111 (297)
..++..+.+|+.+.++.- .-..+++-......||-|+....++.+++..-- -|.++.+=++-.+
T Consensus 52 t~~E~lL~~LVk~~iKk~--~~~~~elv~~~~~~~~~h~~iq~l~~iir~~Y~--------------D~~D~~~rL~~tL 115 (182)
T PF06861_consen 52 TTEEALLCWLVKQSIKKN--FKQLAELVCQPSHNADKHAHIQWLMSIIRAVYR--------------DHYDSWSRLCATL 115 (182)
T ss_pred CcHHHHHHHHHHHHHHHH--HHHHHHHHhccCCCCchhHHHHHHHHHHHHHHh--------------chhhHHHHHHHHH
Confidence 344566777777776533 334555656668899999999999999887432 2455555555555
Q ss_pred HhhhhCCCcEEEecCCchhhh
Q 022466 112 AYKIRYPDKIHLLRGNHEDAK 132 (297)
Q Consensus 112 ~lk~~~p~~v~~lrGNHE~~~ 132 (297)
++...| -++.+.+-||...
T Consensus 116 a~a~~y--~~~~l~~d~e~~s 134 (182)
T PF06861_consen 116 AYASMY--AMRNLLNDHENAS 134 (182)
T ss_pred HHHHHH--HHHHhcCchHHHH
Confidence 554443 3344556676654
No 157
>TIGR01143 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase. This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ.
Probab=20.25 E-value=4.3e+02 Score=25.43 Aligned_cols=77 Identities=18% Similarity=0.201 Sum_probs=0.0
Q ss_pred HHHHHHHHhhCCCeeeecCcEEEEecCC--CCHHH-----HHHHHHhCCCCCCCceeeccCc-----------cCCCCCc
Q 022466 42 CVNARQIFLSQPNLVEVEAPIRICGDVH--GQYQD-----LLRLFEHGGYPPTANYLFLGDY-----------VDRGKQS 103 (297)
Q Consensus 42 ~~~~~~il~~ep~~l~~~~~i~vvGDIH--G~~~~-----L~~il~~~~~~~~~~~vfLGD~-----------VDrG~~s 103 (297)
++.+.+.++..+ ..+++|+|+.- |+++. +.+++.... .+.+++.||- +-.=++.
T Consensus 312 ~~~al~~l~~~~-----~r~i~VlG~~~e~G~~~~~~~~~l~~~~~~~~---~d~vi~~g~~~~~~~~~~~~~~~~~~~~ 383 (417)
T TIGR01143 312 MRAALDALARFP-----GKKILVLGDMAELGEYSEELHAEVGRYANSLG---IDLVFLVGEEAAVIYDSLGCKGFHFADK 383 (417)
T ss_pred HHHHHHHHHhCC-----CCEEEEEcCchhcChHHHHHHHHHHHHHHHcC---CCEEEEECHHHHHHHHhcccCcEEECCH
Q ss_pred HHHHHHHHHhhhhCCCcEEEecCCc
Q 022466 104 LETICLLLAYKIRYPDKIHLLRGNH 128 (297)
Q Consensus 104 ~evl~ll~~lk~~~p~~v~~lrGNH 128 (297)
-++...+. +...|+.++++.|.+
T Consensus 384 ~~~~~~l~--~~~~~~d~VLlkGSr 406 (417)
T TIGR01143 384 DELLAFLK--LELGEGDVVLVKGSR 406 (417)
T ss_pred HHHHHHHH--HhcCCCCEEEEEeCC
Done!