Query 022469
Match_columns 296
No_of_seqs 338 out of 2274
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 05:58:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022469.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022469hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3elb_A Ethanolamine-phosphate 100.0 1.6E-55 5.6E-60 420.2 23.4 239 47-295 3-246 (341)
2 3hl4_A Choline-phosphate cytid 100.0 2.6E-32 9E-37 247.7 16.6 140 46-189 71-212 (236)
3 3elb_A Ethanolamine-phosphate 99.9 8.7E-28 3E-32 229.0 14.5 139 46-188 193-336 (341)
4 2b7l_A Glycerol-3-phosphate cy 99.9 4.1E-24 1.4E-28 176.0 12.0 127 52-189 2-129 (132)
5 1coz_A Protein (glycerol-3-pho 99.9 6E-24 2.1E-28 174.2 11.4 125 52-187 2-127 (129)
6 3glv_A Lipopolysaccharide core 99.9 5.1E-23 1.8E-27 172.8 11.8 132 51-189 2-138 (143)
7 3op1_A Macrolide-efflux protei 99.9 3.9E-22 1.3E-26 187.7 13.2 135 52-189 21-177 (308)
8 2x0k_A Riboflavin biosynthesis 99.8 1.4E-20 4.9E-25 179.1 11.2 135 53-189 17-174 (338)
9 1mrz_A Riboflavin kinase/FMN a 99.8 6.3E-20 2.1E-24 171.6 11.8 130 54-189 2-147 (293)
10 3k9w_A Phosphopantetheine aden 99.8 5.5E-19 1.9E-23 155.5 9.8 127 50-189 21-159 (187)
11 1qjc_A Phosphopantetheine aden 99.7 3.9E-18 1.3E-22 143.5 9.9 127 53-189 3-138 (158)
12 1o6b_A Phosphopantetheine aden 99.7 8E-18 2.7E-22 143.8 10.9 127 53-189 4-139 (169)
13 3nv7_A Phosphopantetheine aden 99.7 1.4E-18 4.8E-23 148.9 4.1 125 52-189 3-139 (157)
14 2qtr_A Nicotinate (nicotinamid 99.7 3E-17 1E-21 142.0 10.8 133 52-189 3-166 (189)
15 4f3r_A Phosphopantetheine aden 99.7 2.1E-17 7.2E-22 142.1 7.7 128 52-189 6-141 (162)
16 1kam_A Deamido-NAD(+), nicotin 99.7 8.6E-16 3E-20 134.2 16.0 132 52-189 8-171 (194)
17 1od6_A PPAT, phosphopantethein 99.7 3.8E-16 1.3E-20 131.7 12.4 122 54-189 3-139 (160)
18 3f3m_A Phosphopantetheine aden 99.6 3.1E-16 1E-20 135.7 9.0 124 52-189 4-140 (168)
19 3nbk_A Phosphopantetheine aden 99.6 9.2E-16 3.1E-20 133.9 10.2 131 48-189 18-157 (177)
20 1k4m_A NAMN adenylyltransferas 99.6 1.4E-15 4.7E-20 134.9 10.9 92 54-149 6-110 (213)
21 3nd5_A Phosphopantetheine aden 99.6 1.3E-15 4.4E-20 132.1 7.7 127 52-189 3-140 (171)
22 1vlh_A Phosphopantetheine aden 99.6 3.5E-15 1.2E-19 128.9 9.0 123 52-189 13-149 (173)
23 1yum_A 'probable nicotinate-nu 99.6 1.1E-14 3.8E-19 132.3 11.6 94 51-148 23-129 (242)
24 2h29_A Probable nicotinate-nuc 99.5 4.5E-14 1.5E-18 122.8 9.2 132 52-189 3-166 (189)
25 2qjo_A Bifunctional NMN adenyl 99.5 1E-13 3.4E-18 129.0 10.1 130 51-190 7-152 (341)
26 3gmi_A UPF0348 protein MJ0951; 99.5 3.6E-13 1.2E-17 129.0 13.4 134 50-189 51-239 (357)
27 3do8_A Phosphopantetheine aden 99.5 2E-14 6.8E-19 121.8 3.2 124 53-188 2-142 (148)
28 1ej2_A Nicotinamide mononucleo 99.5 4E-13 1.4E-17 116.2 11.5 123 53-189 5-142 (181)
29 3h05_A Uncharacterized protein 99.4 4.8E-13 1.6E-17 116.3 9.4 132 52-189 3-149 (177)
30 1f9a_A Hypothetical protein MJ 99.4 6.7E-12 2.3E-16 107.3 14.4 126 53-189 2-136 (168)
31 2ejc_A Pantoate--beta-alanine 99.3 1.6E-13 5.4E-18 127.5 0.0 135 44-182 16-189 (280)
32 1kqn_A Nmnat, nicotinamide mon 99.3 8.2E-12 2.8E-16 115.7 11.5 87 49-138 6-106 (279)
33 3hl4_A Choline-phosphate cytid 99.3 3.9E-12 1.3E-16 115.3 6.2 54 243-296 70-125 (236)
34 1nup_A FKSG76; NAD biosynthesi 99.3 1.9E-11 6.4E-16 111.4 10.5 88 51-138 6-104 (252)
35 1lw7_A Transcriptional regulat 99.2 1.3E-10 4.3E-15 110.1 12.9 127 53-186 4-154 (365)
36 2qjt_B Nicotinamide-nucleotide 99.1 6.1E-10 2.1E-14 104.1 12.7 129 52-188 8-152 (352)
37 1v8f_A Pantoate-beta-alanine l 98.9 5.4E-11 1.9E-15 110.2 -2.1 127 52-183 20-186 (276)
38 3ag6_A Pantothenate synthetase 98.9 5.1E-10 1.8E-14 104.0 2.8 134 44-182 17-190 (283)
39 3glv_A Lipopolysaccharide core 98.7 2.7E-08 9.3E-13 82.8 6.0 43 249-291 2-44 (143)
40 1jhd_A Sulfate adenylyltransfe 98.6 6.7E-07 2.3E-11 86.7 13.7 146 39-190 181-372 (396)
41 2b7l_A Glycerol-3-phosphate cy 98.5 1.2E-07 4E-12 77.3 6.1 40 250-289 2-41 (132)
42 1v47_A ATP sulfurylase; produc 98.5 1.4E-06 4.7E-11 83.1 14.2 146 39-190 144-330 (349)
43 1coz_A Protein (glycerol-3-pho 98.5 1.3E-07 4.6E-12 76.5 5.9 38 250-287 2-39 (129)
44 3cov_A Pantothenate synthetase 98.4 1.4E-08 4.8E-13 95.1 -1.9 109 54-165 35-172 (301)
45 1vlh_A Phosphopantetheine aden 98.2 9.3E-07 3.2E-11 75.9 5.4 39 249-287 12-50 (173)
46 3nbk_A Phosphopantetheine aden 98.2 8.7E-07 3E-11 77.0 4.7 48 240-287 11-59 (177)
47 3k9w_A Phosphopantetheine aden 98.2 1.1E-06 3.7E-11 77.0 4.7 39 249-287 22-60 (187)
48 2ejc_A Pantoate--beta-alanine 97.7 2.2E-05 7.6E-10 72.7 4.3 41 248-289 21-63 (280)
49 3uk2_A Pantothenate synthetase 97.6 0.00012 4E-09 67.9 8.2 78 39-120 12-92 (283)
50 1yum_A 'probable nicotinate-nu 97.5 6E-05 2.1E-09 68.0 4.2 39 249-287 23-63 (242)
51 3inn_A Pantothenate synthetase 97.5 0.00065 2.2E-08 63.7 10.6 76 40-120 33-113 (314)
52 3q12_A Pantoate--beta-alanine 97.2 0.00078 2.7E-08 62.5 7.5 75 41-120 16-95 (287)
53 3mxt_A Pantothenate synthetase 96.7 0.0073 2.5E-07 55.9 9.7 74 41-120 16-94 (285)
54 2x0k_A Riboflavin biosynthesis 96.4 0.0014 4.9E-08 62.0 3.3 39 249-287 15-56 (338)
55 1r6x_A ATP:sulfate adenylyltra 96.2 0.24 8.3E-06 47.7 17.6 106 39-150 176-292 (395)
56 3op1_A Macrolide-efflux protei 96.2 0.0031 1E-07 59.1 3.9 39 249-287 20-61 (308)
57 3q12_A Pantoate--beta-alanine 96.1 0.0062 2.1E-07 56.5 5.7 36 248-286 24-61 (287)
58 1g8f_A Sulfate adenylyltransfe 95.8 0.3 1E-05 48.5 16.2 106 39-150 177-293 (511)
59 3n8h_A Pantothenate synthetase 95.5 0.034 1.2E-06 50.9 7.6 66 54-120 26-94 (264)
60 3gmi_A UPF0348 protein MJ0951; 95.1 0.025 8.4E-07 54.0 5.7 36 248-284 51-86 (357)
61 3inn_A Pantothenate synthetase 93.7 0.066 2.3E-06 50.1 5.1 36 248-286 42-79 (314)
62 2gks_A Bifunctional SAT/APS ki 93.3 0.76 2.6E-05 45.8 12.3 106 39-150 152-269 (546)
63 3ag6_A Pantothenate synthetase 92.2 0.19 6.4E-06 46.5 5.7 37 248-287 22-60 (283)
64 3mxt_A Pantothenate synthetase 92.1 0.15 5.2E-06 47.1 5.1 35 248-286 24-60 (285)
65 1v8f_A Pantoate-beta-alanine l 91.7 0.17 5.7E-06 46.6 4.8 35 250-287 20-54 (276)
66 3cr8_A Sulfate adenylyltranfer 91.1 3.4 0.00012 41.1 14.0 106 39-150 152-268 (552)
67 3n8h_A Pantothenate synthetase 90.8 0.16 5.4E-06 46.5 3.6 39 247-286 22-60 (264)
68 1x6v_B Bifunctional 3'-phospho 90.4 6.1 0.00021 40.1 15.3 107 39-150 401-525 (630)
69 1m8p_A Sulfate adenylyltransfe 89.9 1.4 5E-05 44.0 10.2 106 39-150 179-295 (573)
70 3cov_A Pantothenate synthetase 87.4 0.62 2.1E-05 43.3 5.1 30 257-286 40-70 (301)
71 3uk2_A Pantothenate synthetase 82.9 0.89 3.1E-05 41.9 3.8 39 248-287 21-59 (283)
72 1v47_A ATP sulfurylase; produc 77.5 1.3 4.3E-05 42.0 3.0 30 252-281 158-187 (349)
73 1jhd_A Sulfate adenylyltransfe 74.7 1.3 4.4E-05 42.6 2.2 29 252-280 195-225 (396)
74 2l2t_A Receptor tyrosine-prote 31.0 30 0.001 22.9 2.3 29 5-33 4-32 (44)
75 2pp6_A Gifsy-2 prophage ATP-bi 31.0 32 0.0011 26.8 2.8 22 232-253 51-72 (102)
76 1m8p_A Sulfate adenylyltransfe 23.6 44 0.0015 33.2 3.0 30 252-281 193-223 (573)
77 1w3i_A EDA, 2-keto-3-deoxy glu 22.3 3.9E+02 0.013 23.6 9.0 65 98-162 47-115 (293)
78 2nuw_A 2-keto-3-deoxygluconate 21.7 4.2E+02 0.014 23.4 9.3 89 67-162 22-115 (288)
No 1
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-55 Score=420.16 Aligned_cols=239 Identities=48% Similarity=0.845 Sum_probs=198.8
Q ss_pred cCCCCeEEEEeCcCCcCCHHHHHHHHHHHHhcCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHhcCCccEEEEcCCCCc
Q 022469 47 KKKKPVRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNAVKWVDEVISDAPYAI 126 (296)
Q Consensus 47 ~~~~~~rV~~~G~FD~vH~GH~~lL~qAk~lgd~LiVgV~sD~~i~~~Kg~pi~s~eER~~~l~~~k~VD~Vv~~~py~~ 126 (296)
..+++++|++.||||++|.||+++|++|++++|+|+|||++|+.+...|++|++|.+||++++++|+|||+|++..||..
T Consensus 3 ~~~~~~~v~~~G~FD~lH~GH~~lL~~A~~l~d~LiVgV~~d~~v~~~K~~pi~s~eER~~~l~~l~~VD~Vv~f~~~~~ 82 (341)
T 3elb_A 3 GGRRAVRVWCDGCYDMVHYGHSNQLRQARAMGDYLIVGVHTDEEIAKHKGPPVFTQEERYKMVQAIKWVDEVVPAAPYVT 82 (341)
T ss_dssp -CCCCCEEEEEECCCSCCHHHHHHHHHHHHTSSEEEEEECCHHHHHHHSSCCSSCHHHHHHHHHHBTTCCEEEETCCSSC
T ss_pred CCCCceEEEEEeeCCCCCHHHHHHHHHHHHhCCcCEEEeecCHHHhccCCCCCCCHHHHHHHHHHcCCCCEEEecCCCCC
Confidence 45677899999999999999999999999999999999999998766777899999999999999999999998777766
Q ss_pred cHHHHHHHHHhcCccEEEEcCCCCcCCCCCchHHHHHHCCeEEEcCCCCCCCHHHHHHHHhhchhcCcccCcC--Ccchh
Q 022469 127 TKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGRYKQIKRTEGVSSTDIVGRMLLCVRERSISDSH--NHSSL 204 (296)
Q Consensus 127 t~efl~~ll~~~~~d~VV~GdD~~fg~~g~d~y~~lk~~g~v~~v~rt~~VSST~Ir~rIl~~~~~~~~~~~~--~~~~~ 204 (296)
+.+|+ +++++|++|+|+||++|.++.+.|+.++++|+++++++++++|||+|++||++++|+|+..... ...+.
T Consensus 83 ~~efi----~~~~~d~vV~G~D~~~g~~~~~~~~~~k~~G~~~~~~~t~g~STT~ii~ri~~~~~~~~~~~~~~~~~~~~ 158 (341)
T 3elb_A 83 TLETL----DKYNCDFCVHGNDITLTVDGRDTYEEVKQAGRYRECKRTQGVSTTDLVGRMLLVTKAHHSSQEMSSEYREY 158 (341)
T ss_dssp CHHHH----HHTTCSEEEECSCCCBCTTSCBTTHHHHHTTCEEECCCCTTCCHHHHHHHHHC------------------
T ss_pred HHHHH----HHhCCCEEEECCCCCCCCCCcchHHHHHhCCEEEEeCCCCCCCHHHHHHHHHHhccccccccccchhhHHH
Confidence 78887 4689999999999999999999999999999999999999999999999999999988753221 11122
Q ss_pred hhhhccCCCccccccccc-cccccccccccceeeeccCCCCCCCCCeEEEEeCcccccCHHHHHHHHHHHhCCC--EEEE
Q 022469 205 QRQFSHGHNQKVEERGSG-GTRVSHFLPTSRRIVQFSNGKGPGPDARIIYIDGAFDLFHAGHVEILRIARGLGD--FLLV 281 (296)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~t~~~i~~f~~~~~~~~~~~~v~~~G~FDl~H~GHi~~L~~a~~~g~--~liv 281 (296)
...++.+. .+.+ |+.+++|++|+++|.||++|+.|.+++++||++|+||+||.||+++|++|+++|| +|||
T Consensus 159 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~f~~g~~~~~~~~iv~~~GsFD~~h~GHl~~L~rA~~l~D~~~LiV 232 (341)
T 3elb_A 159 ADSFGKCP------GGRNPWTGVSQFLQTSQKIIQFASGKEPQPGETVIYVAGAFDLFHIGHVDFLEKVHRLAERPYIIA 232 (341)
T ss_dssp -------------------CCCCCCCCCCHHHHHHHCCCCCCCTTCEEEEEEECCTTCCHHHHHHHHHHHTTSSSEEEEE
T ss_pred HHhhccCc------cccCCCcceecccCCcceeeeeccCCCCCCCCEEEEEecccCCCCHHHHHHHHHHHHhCCCCEEEE
Confidence 22333322 2233 8889999999999999999999999999999999999999999999999999999 9999
Q ss_pred EEeCchhhhhcCCC
Q 022469 282 GIHNDQTVRLKNPS 295 (296)
Q Consensus 282 gv~~d~~~~~~k~~ 295 (296)
||++|++++.+||+
T Consensus 233 gV~~d~~v~~~Kg~ 246 (341)
T 3elb_A 233 GLHFDQEVNHYKGK 246 (341)
T ss_dssp EEECHHHHHHHHCT
T ss_pred EEccCHhhHhhcCC
Confidence 99999999988763
No 2
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus}
Probab=100.00 E-value=2.6e-32 Score=247.66 Aligned_cols=140 Identities=40% Similarity=0.651 Sum_probs=130.0
Q ss_pred hcCCCCeEEEEeCcCCcCCHHHHHHHHHHHHh--cCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHhcCCccEEEEcCC
Q 022469 46 RKKKKPVRVYMDGCFDMMHYGHCNALRQARAL--GDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNAVKWVDEVISDAP 123 (296)
Q Consensus 46 ~~~~~~~rV~~~G~FD~vH~GH~~lL~qAk~l--gd~LiVgV~sD~~i~~~Kg~pi~s~eER~~~l~~~k~VD~Vv~~~p 123 (296)
.+.+++++||+.|+||++|.||+++|++|+++ +|+|+|||++|+.+...|++|+|+.+||++++++|+|||+|++++|
T Consensus 71 ~~~~~~~~V~~~GtFD~~H~GHl~iL~rAk~lf~gD~LIVgV~~D~~v~~~Kg~pi~s~eER~e~v~~~k~VD~Vvv~~p 150 (236)
T 3hl4_A 71 TPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVRNAP 150 (236)
T ss_dssp CCTTSCEEEEEEECCTTCCHHHHHHHHHHHTSSSSEEEEEEECCHHHHHHHTCCCSSCHHHHHHHHHTBTTCSEEESSCC
T ss_pred CCCCCCeEEEEeccCCCCCHHHHHHHHHHHHhcCCCeEEEEEcccHHHhhcCCCCCCCHHHHHHHHHHhCCCCeEEECCc
Confidence 45678889999999999999999999999999 4799999999998877788899999999999999999999999999
Q ss_pred CCccHHHHHHHHHhcCccEEEEcCCCCcCCCCCchHHHHHHCCeEEEcCCCCCCCHHHHHHHHhhc
Q 022469 124 YAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGRYKQIKRTEGVSSTDIVGRMLLC 189 (296)
Q Consensus 124 y~~t~efl~~ll~~~~~d~VV~GdD~~fg~~g~d~y~~lk~~g~v~~v~rt~~VSST~Ir~rIl~~ 189 (296)
|.++.+|+ +++++|+||+|+|+.++.++.|.|+.+++.|++.++++++++|||+|++||+..
T Consensus 151 ~~l~~d~i----~~~~~d~Vv~GDd~~~~~~~~d~y~~lk~~G~~~~v~rt~giSTT~Ii~RI~~~ 212 (236)
T 3hl4_A 151 WTLTPEFL----AEHRIDFVAHDDIPYSSAGSDDVYKHIKEAGMFAPTQRTEGISTSDIITRIVRD 212 (236)
T ss_dssp SSCCHHHH----HHTTCCEEEEESSCCCCSSCSCTTHHHHHTTCEEEECCCTTCCHHHHHHHHHHH
T ss_pred CcCcHHHH----HHcCCCEEEECCccccCCCchhHHHHHHhCCeEEEeccCCCCCHHHHHHHHHHh
Confidence 99888887 468999999999999888888999999999999999999999999999999864
No 3
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=99.95 E-value=8.7e-28 Score=229.05 Aligned_cols=139 Identities=31% Similarity=0.620 Sum_probs=125.8
Q ss_pred hcCCCCeEEEEeCcCCcCCHHHHHHHHHHHHhcC--eEEEEEeCChhhhhcCC--CCCCCHHHHHHHHHhcCCccEEEEc
Q 022469 46 RKKKKPVRVYMDGCFDMMHYGHCNALRQARALGD--QLVVGVVSDAEIIANKG--PPVTPLHERMIMVNAVKWVDEVISD 121 (296)
Q Consensus 46 ~~~~~~~rV~~~G~FD~vH~GH~~lL~qAk~lgd--~LiVgV~sD~~i~~~Kg--~pi~s~eER~~~l~~~k~VD~Vv~~ 121 (296)
.+.+..++|++.||||++|.||+.+|++|++++| +|+|||++|+.++..|+ +|+|+.+||++++++|++||+|+++
T Consensus 193 ~~~~~~~iv~~~GsFD~~h~GHl~~L~rA~~l~D~~~LiVgV~~d~~v~~~Kg~~~pi~~~~ER~~~v~~~~~vd~V~v~ 272 (341)
T 3elb_A 193 EPQPGETVIYVAGAFDLFHIGHVDFLEKVHRLAERPYIIAGLHFDQEVNHYKGKNYPIMNLHERTLSVLACRYVSEVVIG 272 (341)
T ss_dssp CCCTTCEEEEEEECCTTCCHHHHHHHHHHHTTSSSEEEEEEEECHHHHHHHHCTTCCSSCHHHHHHHHHTBTTCCEEEEE
T ss_pred CCCCCCEEEEEecccCCCCHHHHHHHHHHHHhCCCCEEEEEEccCHhhHhhcCCCCCCCCHHHHHHHHHHcCCCCCEEEC
Confidence 3445567899999999999999999999999999 99999999998877777 5999999999999999999999999
Q ss_pred CCCCccHHHHHHHHHhcCccEEEEcCCCCc-CCCCCchHHHHHHCCeEEEcCCCCCCCHHHHHHHHhh
Q 022469 122 APYAITKDFMKKLFDEYNIDYIIHGDDPCV-LPDGTDAYELAKKAGRYKQIKRTEGVSSTDIVGRMLL 188 (296)
Q Consensus 122 ~py~~t~efl~~ll~~~~~d~VV~GdD~~f-g~~g~d~y~~lk~~g~v~~v~rt~~VSST~Ir~rIl~ 188 (296)
+||.++.+|+ ++++++++|+|+|+.. ...|.|+|+..+++|+++.+++++++|||+|++||+.
T Consensus 273 ~~~~l~~~~~----~~~~~~~iv~G~d~~~~~~~g~d~y~~~k~~G~~~~i~~~~~~STt~ii~RI~~ 336 (341)
T 3elb_A 273 APYAVTAELL----SHFKVDLVCHGKTEIIPDRDGSDPYQEPKRRGIFRQIDSGSNLTTDLIVQRIIT 336 (341)
T ss_dssp ECSSCCHHHH----HHTTCSEEEECSSCCCCCTTSCCTTHHHHHHTCEEECCCSCCCCHHHHHHHHHC
T ss_pred CCCcchHHHH----HhcCCcEEEECCCCccccCCccchHHHHHhCCEEEEcCCCCCCCHHHHHHHHHH
Confidence 9998888887 4689999999999875 3456789999999999999999999999999999974
No 4
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus}
Probab=99.91 E-value=4.1e-24 Score=176.01 Aligned_cols=127 Identities=28% Similarity=0.481 Sum_probs=93.6
Q ss_pred eEEEEeCcCCcCCHHHHHHHHHHHHhcCeEEEEEeCChhhhhcCC-CCCCCHHHHHHHHHhcCCccEEEEcCCCCccHHH
Q 022469 52 VRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKG-PPVTPLHERMIMVNAVKWVDEVISDAPYAITKDF 130 (296)
Q Consensus 52 ~rV~~~G~FD~vH~GH~~lL~qAk~lgd~LiVgV~sD~~i~~~Kg-~pi~s~eER~~~l~~~k~VD~Vv~~~py~~t~ef 130 (296)
.+++++|+|||+|.||+.++++|++.+++++|++++|+.... ++ +|+++.+||++++++++++|.++...+|. +|
T Consensus 2 ~~~~~~G~FDp~H~GH~~li~~a~~~~~~~~v~v~~~~~~~~-~~~~~l~~~~eR~~~l~~~~~~d~v~~~~~~~---~~ 77 (132)
T 2b7l_A 2 KRVITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDEFNQI-KHKKSYYDYEQRKMMLESIRYVDLVIPEKGWG---QK 77 (132)
T ss_dssp CEEEEEECCCSCCHHHHHHHHHHHHTSSEEEEEEECHHHHHH-TTCCCSSCHHHHHHHHHTBTTCCEEEEECCGG---GH
T ss_pred eEEEEeeecCcCCHHHHHHHHHHHHhCCcEEEEEECCHHHhc-cCCCCCCCHHHHHHHHHhcCCCCEEEECCChH---HH
Confidence 369999999999999999999999999999999999874322 33 57999999999999998899998755543 57
Q ss_pred HHHHHHhcCccEEEEcCCCCcCCCCCchHHHHHHCCeEEEcCCCCCCCHHHHHHHHhhc
Q 022469 131 MKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGRYKQIKRTEGVSSTDIVGRMLLC 189 (296)
Q Consensus 131 l~~ll~~~~~d~VV~GdD~~fg~~g~d~y~~lk~~g~v~~v~rt~~VSST~Ir~rIl~~ 189 (296)
++. +++++++++|+|+|+.. .++.++..+++.++++...||||.||++|...
T Consensus 78 ~~~-~~~~~~~~iv~G~D~~~------~~~~L~~~~~v~~i~~~~~iSST~IR~~i~~g 129 (132)
T 2b7l_A 78 EDD-VEKFDVDVFVMGHDWEG------EFDFLKDKCEVIYLKRTEGISTTKIKQELYGK 129 (132)
T ss_dssp HHH-HHHTTCCEEEECGGGTT------TTGGGTTTSEEEECSSCC--------------
T ss_pred HHH-HHHcCCCEEEECCCCcC------cHHHHHhCCEEEEECCCCCcCHHHHHHHHHhc
Confidence 665 46789999999999832 23456777899999999999999999998754
No 5
>1coz_A Protein (glycerol-3-phosphate cytidylyltransferase); HET: CTP; 2.00A {Bacillus subtilis} SCOP: c.26.1.2 PDB: 1n1d_A*
Probab=99.90 E-value=6e-24 Score=174.19 Aligned_cols=125 Identities=30% Similarity=0.498 Sum_probs=103.6
Q ss_pred eEEEEeCcCCcCCHHHHHHHHHHHHhcCeEEEEEeCChhh-hhcCCCCCCCHHHHHHHHHhcCCccEEEEcCCCCccHHH
Q 022469 52 VRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEI-IANKGPPVTPLHERMIMVNAVKWVDEVISDAPYAITKDF 130 (296)
Q Consensus 52 ~rV~~~G~FD~vH~GH~~lL~qAk~lgd~LiVgV~sD~~i-~~~Kg~pi~s~eER~~~l~~~k~VD~Vv~~~py~~t~ef 130 (296)
.+++++|+|||+|.||+.++++|++.+++++|++++|+.. .+.+ +++++.+||++|+++++++|.++...+|. +|
T Consensus 2 ~~~~~~G~FDp~H~GH~~li~~a~~~~d~~~v~v~~~~~~~~~~~-~~l~~~~eR~~~l~~~~~~d~v~~~~~~~---~~ 77 (129)
T 1coz_A 2 KKVITYGTFDLLHWGHIKLLERAKQLGDYLVVAISTDEFNLQKQK-KAYHSYEHRKLILETIRYVDEVIPEKNWE---QK 77 (129)
T ss_dssp CEEEEEECCCSCCHHHHHHHHHHHTTSSEEEEEEECHHHHHHHTC-CCSSCHHHHHHHHTTBTTCCEEEEECCST---TH
T ss_pred cEEEEEEeCCCCCHHHHHHHHHHHHhCCCeEEEEECCHHHhcCCC-CCCCCHHHHHHHHHhcCCCCEEEeCCCHH---HH
Confidence 3689999999999999999999999999999999998732 2222 68999999999999998899988755554 56
Q ss_pred HHHHHHhcCccEEEEcCCCCcCCCCCchHHHHHHCCeEEEcCCCCCCCHHHHHHHHh
Q 022469 131 MKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGRYKQIKRTEGVSSTDIVGRML 187 (296)
Q Consensus 131 l~~ll~~~~~d~VV~GdD~~fg~~g~d~y~~lk~~g~v~~v~rt~~VSST~Ir~rIl 187 (296)
++. +++++++++|+|+||. +.++.+++.+++.++++...||||.||++|.
T Consensus 78 ~~~-l~~~~~~~iv~G~D~~------~~~~~L~~~~~v~~~~~~~~iSST~IR~~i~ 127 (129)
T 1coz_A 78 KQD-IIDHNIDVFVMGDDWE------GKFDFLKDQCEVVYLPRTEGISTTKIKEEIA 127 (129)
T ss_dssp HHH-HHHTTCSEEEEEGGGT------TTTGGGTTTSEEEEECCCTTCCHHHHHHTC-
T ss_pred HHH-HHHhCCcEEEECCCCC------CcHHHHHhCCeEEEcCCCCCcCHHHHHHHHH
Confidence 655 4678999999999984 2344667778999999999999999999875
No 6
>3glv_A Lipopolysaccharide core biosynthesis protein; structural GEN PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1}
Probab=99.89 E-value=5.1e-23 Score=172.83 Aligned_cols=132 Identities=27% Similarity=0.354 Sum_probs=88.2
Q ss_pred CeEEEEeCcCCcCCHHHHHHHHHHHHhcCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHhcCCccEEEEcCCCCccHHH
Q 022469 51 PVRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNAVKWVDEVISDAPYAITKDF 130 (296)
Q Consensus 51 ~~rV~~~G~FD~vH~GH~~lL~qAk~lgd~LiVgV~sD~~i~~~Kg~pi~s~eER~~~l~~~k~VD~Vv~~~py~~t~ef 130 (296)
+++|+++|+|||+|.||+.+|++|++++++++|++++|+.....+.++++|.+||+++++++++||.++...| .+|
T Consensus 2 m~~v~~~G~FD~vH~GH~~li~~a~~~~~~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~~~~vd~v~~~~~----~~f 77 (143)
T 3glv_A 2 MIRVMATGVFDILHLGHIHYLKESKKLGDELVVVVARDSTARNNGKIPIFDENSRLALISELKVVDRAILGHE----GDM 77 (143)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTSSEEEEEECCHHHHHHTTCCCSSCHHHHHHHHTTBTTCSEEEECCT----TCH
T ss_pred ceEEEEEeecCCCCHHHHHHHHHHHHhCCCcEEEEECCcchhhcCCCCCCCHHHHHHHHHhcCCCCEEEEcCc----hhH
Confidence 4579999999999999999999999999999999999876544223689999999999999978999988544 246
Q ss_pred HHHHHHhcCccEEEEcCCCCcCCCCCchHHHHHH-CCeEEEcCC----CCCCCHHHHHHHHhhc
Q 022469 131 MKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKK-AGRYKQIKR----TEGVSSTDIVGRMLLC 189 (296)
Q Consensus 131 l~~ll~~~~~d~VV~GdD~~fg~~g~d~y~~lk~-~g~v~~v~r----t~~VSST~Ir~rIl~~ 189 (296)
++ ++++++++++|+|+|++|+.. +-....++ ...+.+++. .+.||||.||++|...
T Consensus 78 ~~-~~~~l~~~~iv~G~d~~f~~~--~l~~~~~~~g~~v~vv~~~~~~~~~iSST~IR~~i~~~ 138 (143)
T 3glv_A 78 MK-TVIEVKPDIITLGYDQKFDEA--ELQSKINKLGITVKIVRISKYDGQLNSSSSVRKKIMEL 138 (143)
T ss_dssp HH-HHHHHCCSEEEECTTCHHHHH--HHHHHHHHHTCCCEEEECCCCC----------------
T ss_pred HH-HHHhcCCCEEEECCCCCCCHH--HHHHHHHHcCCeEEEEEeeccCCCcCCHHHHHHHHHHH
Confidence 64 567899999999999998421 11112222 233444333 3579999999998754
No 7
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=99.87 E-value=3.9e-22 Score=187.70 Aligned_cols=135 Identities=19% Similarity=0.159 Sum_probs=111.4
Q ss_pred eEEEEeCcCCcCCHHHHHHHHHHHHhcCeE---EEEEeCChh---hhhc---CC-CCCCCHHHHHHHHHhcCCccEEEEc
Q 022469 52 VRVYMDGCFDMMHYGHCNALRQARALGDQL---VVGVVSDAE---IIAN---KG-PPVTPLHERMIMVNAVKWVDEVISD 121 (296)
Q Consensus 52 ~rV~~~G~FD~vH~GH~~lL~qAk~lgd~L---iVgV~sD~~---i~~~---Kg-~pi~s~eER~~~l~~~k~VD~Vv~~ 121 (296)
..|+++|+|||+|.||+++|++|++.++++ .+++++|+. +... +. +++++.+||.++++++ +||.++.
T Consensus 21 ~~vvtiG~FDGvH~GHq~li~~a~~~a~~~~~~~vV~TFdphP~~v~~~~~~~~~~~Lt~~~eK~~ll~~l-GVD~v~~- 98 (308)
T 3op1_A 21 DSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPAERERKLKRE-GVEELYL- 98 (308)
T ss_dssp CEEEEESCCSSCCHHHHHHHHHHHHHSSTTCCCEEEEEESSCTHHHHSCCCGGGGCBSSCHHHHHHHHHHH-TCCEEEE-
T ss_pred CeEEEEecCCcccHHHHHHHHHHHHHHHhcCCceEEEEecCCHHHHhCccccCCcccCCCHHHHHHHHHHc-CCCEEEE-
Confidence 369999999999999999999999998643 556666652 2211 12 4799999999999999 6999998
Q ss_pred CCCC-----c-cHHHHHHHHHhcCccEEEEcCCCCcCCCCCchHHHHHHCCe--EEEcCC----CCCCCHHHHHHHHhhc
Q 022469 122 APYA-----I-TKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGR--YKQIKR----TEGVSSTDIVGRMLLC 189 (296)
Q Consensus 122 ~py~-----~-t~efl~~ll~~~~~d~VV~GdD~~fg~~g~d~y~~lk~~g~--v~~v~r----t~~VSST~Ir~rIl~~ 189 (296)
.||+ + +++|+++++.+++++.+|+|+||+||. +.++.+.+++.++ +.++++ .+.||||.||+.|..+
T Consensus 99 ~~F~~~~a~ls~e~Fv~~ll~~l~~~~ivvG~DfrFG~-r~G~~~~L~~~~~~~V~~v~~~~~~~~~ISST~IR~~L~~G 177 (308)
T 3op1_A 99 LDFSSQFASLTAQEFFATYIKAMNAKIIVAGFDYTFGS-DKKTAEDLKNYFDGEVIIVPPVEDEKGKISSTRIRQAILDG 177 (308)
T ss_dssp ECCCHHHHTCCHHHHHHHHHHHHTEEEEEEETTCCBTT-TTBCSTTHHHHCSSEEEEECCCBCSSCBCCHHHHHHHHHHT
T ss_pred ecCCHHHHcCCHHHHHHHHHHHcCCCEEEECcCCCCCC-cCCCHHHHHHhCCCCEEEeCCEecCCceEeHHHHHHHHHcC
Confidence 8885 2 478998877889999999999999999 9988888888764 778877 3579999999999854
No 8
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}
Probab=99.83 E-value=1.4e-20 Score=179.11 Aligned_cols=135 Identities=16% Similarity=0.207 Sum_probs=109.9
Q ss_pred EEEEeCcCCcCCHHHHHHHHHHHHhcCe---EEEEEeCChh---h-hhcCC-CCCCCHHHHHHHHHhcCCccEEEEcCCC
Q 022469 53 RVYMDGCFDMMHYGHCNALRQARALGDQ---LVVGVVSDAE---I-IANKG-PPVTPLHERMIMVNAVKWVDEVISDAPY 124 (296)
Q Consensus 53 rV~~~G~FD~vH~GH~~lL~qAk~lgd~---LiVgV~sD~~---i-~~~Kg-~pi~s~eER~~~l~~~k~VD~Vv~~~py 124 (296)
.|+++|+|||+|.||+.+|++|++.++. ..+++++|+. + ...+. +++++.+||+++++++ +||.++. .||
T Consensus 17 ~vvtiG~FDGvH~GHq~Li~~a~~~a~~~~~~~vvvtFdphP~~v~~~~~~~~~L~~~~eR~~ll~~~-gVD~v~v-~~F 94 (338)
T 2x0k_A 17 SAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAESF-GIDGVLV-IDF 94 (338)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCHHHHHSTTCSCCBSSCHHHHHHHHHHT-TCSEEEE-ECT
T ss_pred eEEEEEeCCcccHHHHHHHHHHHHHHHHcCCcEEEEEecCCHHHHcCCccCCCCCCCHHHHHHHHHhc-CCCEEEE-ccc
Confidence 6999999999999999999999998864 4677777763 2 22222 4699999999999998 6999988 677
Q ss_pred C-----c-cHHHHHH-HHHhcCccEEEEcCCCCcCCCCCchHHHHHHC----CeEEEcCC----CCCCCHHHHHHHHhhc
Q 022469 125 A-----I-TKDFMKK-LFDEYNIDYIIHGDDPCVLPDGTDAYELAKKA----GRYKQIKR----TEGVSSTDIVGRMLLC 189 (296)
Q Consensus 125 ~-----~-t~efl~~-ll~~~~~d~VV~GdD~~fg~~g~d~y~~lk~~----g~v~~v~r----t~~VSST~Ir~rIl~~ 189 (296)
+ . .++|++. ++++++++++|+|+||+||.++.++.+.+++. .++.++++ ...||||.||+.|..+
T Consensus 95 ~~~~a~ls~e~Fi~~il~~~l~~~~ivvG~Df~FG~~r~g~~~~L~~~~~~g~~V~~v~~~~~~~~~ISST~IR~~L~~G 174 (338)
T 2x0k_A 95 TRELSGTSPEKYVEFLLEDTLHASHVVVGANFTFGENAAGTADSLRQICQSRLTVDVIDLLDDEGVRISSTTVREFLSEG 174 (338)
T ss_dssp TTSSSSCCHHHHHHHCCCCCTCEEEEEEETTCEESGGGCEEHHHHHHHTTTTSEEEEECCCEETTEECSHHHHHHHHHTT
T ss_pred cHHHHhCCHHHHHHHHHHhhcCCCEEEEeecCCCCCCCCCCHHHHHHHhcCCeEEEEECcEecCCcccccchHHHHHhcC
Confidence 4 2 3679987 55678999999999999999998888888764 36777877 3579999999998754
No 9
>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A
Probab=99.81 E-value=6.3e-20 Score=171.64 Aligned_cols=130 Identities=17% Similarity=0.165 Sum_probs=102.2
Q ss_pred EEEeCcCCcCCHHHHHHHHHHHHhcCe---EEEEEeCCh--hhhh-cCCCCCCCHHHHHHHHHhcCCccEEEEcCCC---
Q 022469 54 VYMDGCFDMMHYGHCNALRQARALGDQ---LVVGVVSDA--EIIA-NKGPPVTPLHERMIMVNAVKWVDEVISDAPY--- 124 (296)
Q Consensus 54 V~~~G~FD~vH~GH~~lL~qAk~lgd~---LiVgV~sD~--~i~~-~Kg~pi~s~eER~~~l~~~k~VD~Vv~~~py--- 124 (296)
|+++|+||++|.||+++|++|+++++. ..+++++|+ .+.. .+.+++++.+||.+++++++ ++.+ .||
T Consensus 2 vvtiG~FDgvH~GH~~ll~~a~~~a~~~~~~~vVvtFdphP~~l~~~~~~~l~~~~eR~~ll~~lg-~~~v---~~F~~~ 77 (293)
T 1mrz_A 2 VVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPPEYFLPDFPGLLMTVESRVEMLSRYA-RTVV---LDFFRI 77 (293)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHHHHHHHTCCCEEEEESSCGGGGSTTCCCBSSCHHHHHHHHTTTS-CEEE---ECHHHH
T ss_pred EEEEeeCccccHHHHHHHHHHHHHHHHcCCeEEEEEecCCHHHhCCCCCCCCCCHHHHHHHHHhCC-CEEE---EEhHHh
Confidence 789999999999999999999999865 235555554 3322 22257999999999999995 3333 455
Q ss_pred --CccHHHHHHHHHhcCccEEEEcCCCCcCCCCCchHHHHHHC-CeEEEcCCC----CCCCHHHHHHHHhhc
Q 022469 125 --AITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKA-GRYKQIKRT----EGVSSTDIVGRMLLC 189 (296)
Q Consensus 125 --~~t~efl~~ll~~~~~d~VV~GdD~~fg~~g~d~y~~lk~~-g~v~~v~rt----~~VSST~Ir~rIl~~ 189 (296)
..+++|++.++ ++++++|+|+||+||.++.++++.+++. +++.+++.. ..||||.||+.|...
T Consensus 78 a~ls~~~Fi~~il--l~~~~iVvG~Df~fG~~~~g~~~~L~~~G~~V~~v~~~~~~~~~iSST~IR~~L~~G 147 (293)
T 1mrz_A 78 KDLTPEGFVERYL--SGVSAVVVGRDFRFGKNASGNASFLRKKGVEVYEIEDVVVQGKRVSSSLIRNLVQEG 147 (293)
T ss_dssp TTCCHHHHHHHHC--TTCCEEEEETTCCBSGGGCBCHHHHHHTTCEEEEECCCEETTEECCHHHHHHHHHTT
T ss_pred hcCCHHHHHHHHh--cCCCEEEECCCCCCCCCCCCCHHHHHhCCCEEEEECCEEeCCccccHhHHHHHHhcC
Confidence 23468887765 8999999999999999888888888864 588888863 579999999999765
No 10
>3k9w_A Phosphopantetheine adenylyltransferase; niaid, ssgcid, seattle structural genomics center for infect disease, coenzyme A, COA; HET: 4PS ADE PG4; 1.60A {Burkholderia pseudomallei} PDB: 3ikz_A* 3pxu_A*
Probab=99.77 E-value=5.5e-19 Score=155.47 Aligned_cols=127 Identities=24% Similarity=0.274 Sum_probs=94.4
Q ss_pred CCeEEEEeCcCCcCCHHHHHHHHHHHHhcCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHh-cCCccEEEEcCCCC-cc
Q 022469 50 KPVRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNA-VKWVDEVISDAPYA-IT 127 (296)
Q Consensus 50 ~~~rV~~~G~FD~vH~GH~~lL~qAk~lgd~LiVgV~sD~~i~~~Kg~pi~s~eER~~~l~~-~k~VD~Vv~~~py~-~t 127 (296)
.++++++.|+|||+|.||+.++++|++++|+++++|.+++ .| +|+++.+||+++++. ++++|.+.+ .+|. ++
T Consensus 21 ~mki~v~~GsFDpiH~GHl~li~~A~~~~d~viv~v~~~p----~K-~~l~s~eeR~~ml~~~~~~v~~v~v-~~f~~~~ 94 (187)
T 3k9w_A 21 SMVVAVYPGTFDPLTRGHEDLVRRASSIFDTLVVGVADSR----AK-KPFFSLEERLKIANEVLGHYPNVKV-MGFTGLL 94 (187)
T ss_dssp CCCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEEECCG----GG-CCSSCHHHHHHHHHHHHTTCTTEEE-EEESSCH
T ss_pred CcEEEEEEEeCCcCcHHHHHHHHHHHHHCCcEEEEEecCC----cc-CCCCCHHHHHHHHHHHhccCCcEEE-EechhhH
Confidence 3557999999999999999999999999999999999875 23 589999999999998 688998876 4554 44
Q ss_pred HHHHHHHHHhcCccEEEEc----CCCCcCCCCCchHHHHHH---CCeEEEcCCC---CCCCHHHHHHHHhhc
Q 022469 128 KDFMKKLFDEYNIDYIIHG----DDPCVLPDGTDAYELAKK---AGRYKQIKRT---EGVSSTDIVGRMLLC 189 (296)
Q Consensus 128 ~efl~~ll~~~~~d~VV~G----dD~~fg~~g~d~y~~lk~---~g~v~~v~rt---~~VSST~Ir~rIl~~ 189 (296)
.+++ ++++++++|+| .||.+... ....-+. ..+...+.+. ..||||.||+++...
T Consensus 95 ~d~l----~~l~~~~iv~G~r~~~Df~~E~~---la~~nr~l~~~ietv~l~~~~~~~~ISST~IRe~~~~g 159 (187)
T 3k9w_A 95 KDFV----RANDARVIVRGLRAVSDFEYEFQ---MAGMNRYLLPDVETMFMTPSDQYQFISGTIVREIAQLG 159 (187)
T ss_dssp HHHH----HHTTCSEEEEECCTTSCHHHHHH---HHHHHHHHCTTCEEEEECCCGGGTTCCHHHHHHHHHTT
T ss_pred HHHH----HHcCCCEEEECCCcccccchHHH---HHHHHHHhCCCCcEEEEecccccccccHHHHHHHHHcC
Confidence 4554 56899999999 56553210 0011112 2234444443 479999999998754
No 11
>1qjc_A Phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.64A {Escherichia coli} SCOP: c.26.1.3 PDB: 1h1t_A* 1gn8_A* 1b6t_A* 3l92_A* 3l93_A
Probab=99.75 E-value=3.9e-18 Score=143.51 Aligned_cols=127 Identities=15% Similarity=0.204 Sum_probs=92.5
Q ss_pred EEEEeCcCCcCCHHHHHHHHHHHHhcCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHh-cCCccEEEEcCCCC-ccHHH
Q 022469 53 RVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNA-VKWVDEVISDAPYA-ITKDF 130 (296)
Q Consensus 53 rV~~~G~FD~vH~GH~~lL~qAk~lgd~LiVgV~sD~~i~~~Kg~pi~s~eER~~~l~~-~k~VD~Vv~~~py~-~t~ef 130 (296)
++++.|+|||+|.||+.++++|++.+|++++++++++ .| +++++.+||++|++. +.++|.+.. .+|+ ++.++
T Consensus 3 i~i~~GsFDpvH~GH~~l~~~a~~~~d~v~v~~~~~p----~k-~~~~~~~~R~~ml~~a~~~~~~v~v-~~~~~~~~~~ 76 (158)
T 1qjc_A 3 RAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASP----SK-KPMFTLEERVALAQQATAHLGNVEV-VGFSDLMANF 76 (158)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHHTTSSEEEEEEESCC----SS-CCSSCHHHHHHHHHHHTTTCTTEEE-EEECSCHHHH
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHhCCEEEEEECCCC----CC-CCCCCHHHHHHHHHHHHhcCCCeEE-cccchHHHHH
Confidence 5899999999999999999999999999999998875 34 478999999999996 778998766 4553 33333
Q ss_pred HHHHHHhcCccEEEEcCCCCcCCCCCchHHHH-HHC----CeEEEcCCC--CCCCHHHHHHHHhhc
Q 022469 131 MKKLFDEYNIDYIIHGDDPCVLPDGTDAYELA-KKA----GRYKQIKRT--EGVSSTDIVGRMLLC 189 (296)
Q Consensus 131 l~~ll~~~~~d~VV~GdD~~fg~~g~d~y~~l-k~~----g~v~~v~rt--~~VSST~Ir~rIl~~ 189 (296)
+++++++++++|.|..++......+..+ +.. ..+..++.. ..||||.||+++..+
T Consensus 77 ----l~~l~~~~~v~G~d~~~~~~~~~~~~~~~r~~~~~~~~i~~~~~~~~~~iSST~IR~~i~~g 138 (158)
T 1qjc_A 77 ----ARNQHATVLIRGLRAVADFEYEMQLAHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHQ 138 (158)
T ss_dssp ----HHHTTCCEEEEECCTTCCHHHHHHHHHHHHHHCTTSEEEEECCCGGGTTCCHHHHHHHHHTT
T ss_pred ----HHHcCCCEEEEeccchhhhHHHHHHHHhCccCCCCCCEEEEECCCCCCccCHHHHHHHHHcC
Confidence 4668899999999977643221111111 221 123334332 469999999999755
No 12
>1o6b_A Phosphopantetheine adenylyltransferase; structural genomics; HET: ADP; 2.20A {Bacillus subtilis} SCOP: c.26.1.3
Probab=99.74 E-value=8e-18 Score=143.77 Aligned_cols=127 Identities=16% Similarity=0.141 Sum_probs=92.0
Q ss_pred EEEEeCcCCcCCHHHHHHHHHHHHhcCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHh-cCCccEEEEcCCCC-ccHHH
Q 022469 53 RVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNA-VKWVDEVISDAPYA-ITKDF 130 (296)
Q Consensus 53 rV~~~G~FD~vH~GH~~lL~qAk~lgd~LiVgV~sD~~i~~~Kg~pi~s~eER~~~l~~-~k~VD~Vv~~~py~-~t~ef 130 (296)
+++++|+|||+|.||+.++++|++.+|+++|.+..++ .| +++++.+||++|++. +.++|.+.. .||+ ++.+
T Consensus 4 i~i~~GsFDpvH~GH~~li~~a~~~~d~v~v~~~~~p----~k-~~l~~~~~R~~ml~~a~~~~~~v~v-~~~e~~~~~- 76 (169)
T 1o6b_A 4 IAVCPGSFDPVTYGHLDIIKRGAHIFEQVYVCVLNNS----SK-KPLFSVEERCELLREVTKDIPNITV-ETSQGLLID- 76 (169)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEECCCC----SS-CCSSCHHHHHHHHHHHHTTCTTEEE-EECSSCHHH-
T ss_pred EEEEEEeeCCCCHHHHHHHHHHHHhCCEEEEEECCCC----cc-CCCCCHHHHHHHHHHHHhcCCCEEE-cccchHHHH-
Confidence 5899999999999999999999999999887776543 34 478999999999996 568887766 4554 3333
Q ss_pred HHHHHHhcCccEEEEcCCCCcCCCCCchHHHHHH----CCeEEE-cCC--CCCCCHHHHHHHHhhc
Q 022469 131 MKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKK----AGRYKQ-IKR--TEGVSSTDIVGRMLLC 189 (296)
Q Consensus 131 l~~ll~~~~~d~VV~GdD~~fg~~g~d~y~~lk~----~g~v~~-v~r--t~~VSST~Ir~rIl~~ 189 (296)
.+++++++++++|.|+.++.+.......+.+ ...... .+. ...||||.||+++..+
T Consensus 77 ---~l~~l~~~~~i~G~d~~~~~~~~~~~~~~~r~~~~~~~~i~~~~~~~~~~ISST~IR~~l~~G 139 (169)
T 1o6b_A 77 ---YARRKNAKAILRGLRAVSDFEYEMQGTSVNRVLDESIETFFMMANNQYSFLSSSIVKEVARYD 139 (169)
T ss_dssp ---HHHHTTCSEEEEEECSGGGHHHHHHHHHHHHHHCTTSEEEEEECCSTTTTCCHHHHHHHHHTT
T ss_pred ---HHHHcCCCEEEEcCccccchHHHHHHHHHhccccCCCCEEEEECCCCCCcCcHHHHHHHHHcC
Confidence 3466889999999999876433222222222 123333 322 2469999999999865
No 13
>3nv7_A Phosphopantetheine adenylyltransferase; helicobacter pylori 26695 strain, mutant I4V/N76Y, phosphopa adenylyltransferase; 1.75A {Helicobacter pylori} PDB: 3otw_A*
Probab=99.72 E-value=1.4e-18 Score=148.89 Aligned_cols=125 Identities=20% Similarity=0.206 Sum_probs=91.5
Q ss_pred eEEEEeCcCCcCCHHHHHHHHHHHHhcCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHh-cCCccEEEEcCCCC-ccHH
Q 022469 52 VRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNA-VKWVDEVISDAPYA-ITKD 129 (296)
Q Consensus 52 ~rV~~~G~FD~vH~GH~~lL~qAk~lgd~LiVgV~sD~~i~~~Kg~pi~s~eER~~~l~~-~k~VD~Vv~~~py~-~t~e 129 (296)
+++++.|+|||+|.||+.++++|++++|+|+|++.+++ .| .|+++.+||++|++. ++.+|.+.. .+|. +..+
T Consensus 3 ~i~i~~GsFDPiH~GHl~ii~~A~~~~D~viv~v~~~~----~K-~~~~~~~eR~~ml~~a~~~~~~v~v-~~~~~l~~~ 76 (157)
T 3nv7_A 3 KVGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAHSS----AK-NPMFSLDERLKMIQLATKSFKNVEC-VAFEGLLAY 76 (157)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHTTSSEEEEEEECCG----GG-CCSSCHHHHHHHHHHHHTTSTTEEE-EEECSCHHH
T ss_pred EEEEEEEEcCCCCHHHHHHHHHHHHhCCceEEEEccCC----CC-CCCCCHHHHHHHHHHHhcCCCcEEE-EecCchHHH
Confidence 46999999999999999999999999999999998886 34 589999999999997 678888755 3443 3445
Q ss_pred HHHHHHHhcCccEEEEc----CCCCcCCCCCchHHHHHHC---CeEEEcCCCC---CCCHHHHHHHHhhc
Q 022469 130 FMKKLFDEYNIDYIIHG----DDPCVLPDGTDAYELAKKA---GRYKQIKRTE---GVSSTDIVGRMLLC 189 (296)
Q Consensus 130 fl~~ll~~~~~d~VV~G----dD~~fg~~g~d~y~~lk~~---g~v~~v~rt~---~VSST~Ir~rIl~~ 189 (296)
++ ++++++++|.| .||.+.. +....-+.. .+...+++++ .||||.||+.+..+
T Consensus 77 ~~----~~~~~~~ivrG~r~~~D~~ye~---~~a~~n~~l~~~ietv~l~~~~~~~~iSSt~vRe~~~~g 139 (157)
T 3nv7_A 77 LA----KEYHCKVLVRGLRVVSDFEYEL---QMGYANKSLNHELETLYFMPTLQNAFISSSIVRSIIAHK 139 (157)
T ss_dssp HH----HHTTCCCBCCCCSCCCCHHHHH---HHHHHHHHSSCCCCCCCCCCCHHHHTCCHHHHHHHHHTT
T ss_pred HH----HHcCCCEEEECCcccchhhhhH---HHHHHHHHhCCCceEEEEcCCcccceeeHHHHHHHHHcC
Confidence 54 56899999999 5654211 100111222 1233344543 79999999988744
No 14
>2qtr_A Nicotinate (nicotinamide) nucleotide adenylyltran; NAD, nucleotidyltransferase, pyridine nucleotide biosynthesi transferase; HET: NXX; 1.70A {Bacillus anthracis} PDB: 3dv2_A 3mla_A* 3hfj_A* 3mlb_A* 3mmx_A* 3e27_A* 2qtn_A* 2qtm_A*
Probab=99.71 E-value=3e-17 Score=142.04 Aligned_cols=133 Identities=20% Similarity=0.113 Sum_probs=99.8
Q ss_pred eEEEEeCcCCcCCHHHHHHHHHHHHhc--CeEEEEEeCChhhhhcCC-CCCCCHHHHHHHHHh-cCCccEEEEcCCCC--
Q 022469 52 VRVYMDGCFDMMHYGHCNALRQARALG--DQLVVGVVSDAEIIANKG-PPVTPLHERMIMVNA-VKWVDEVISDAPYA-- 125 (296)
Q Consensus 52 ~rV~~~G~FD~vH~GH~~lL~qAk~lg--d~LiVgV~sD~~i~~~Kg-~pi~s~eER~~~l~~-~k~VD~Vv~~~py~-- 125 (296)
.++++.|+|||+|.||+.++++|++.+ +.+++.+++++. .|. +++++.+||++|++. ++++|.+.. .+|+
T Consensus 3 ~i~i~~GsFDPvH~GH~~li~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~~R~~ml~~~~~~~~~v~v-~~~e~~ 78 (189)
T 2qtr_A 3 KIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPP---HKQGRNITSVESRLQMLELATEAEEHFSI-CLEELS 78 (189)
T ss_dssp EEEEEEECCSSCCHHHHC-CHHHHHHTTCSEEEEEECSSCT---TCTTSCCCCHHHHHHHHHHHHTTCTTEEE-CCTGGG
T ss_pred eEEEEecCcccccHHHHHHHHHHHHHcCCCEEEEEECCCCC---CccCCCCCCHHHHHHHHHHHhCCCCCEEE-ehHHhc
Confidence 358999999999999999999999998 889888887662 343 468999999999995 778888877 5664
Q ss_pred -----ccHHHHHHHHHhcCcc---EEEEcCCCCcCCCCCchHHHHHHCCeEEEcCCC-----------------CCCCHH
Q 022469 126 -----ITKDFMKKLFDEYNID---YIIHGDDPCVLPDGTDAYELAKKAGRYKQIKRT-----------------EGVSST 180 (296)
Q Consensus 126 -----~t~efl~~ll~~~~~d---~VV~GdD~~fg~~g~d~y~~lk~~g~v~~v~rt-----------------~~VSST 180 (296)
++.++++.+-.++ ++ ++|+|.|+.++..+-..++.+.+.+.+.+++|. ..||||
T Consensus 79 ~~~~~~~~~~l~~l~~~~-p~~~~~~v~G~D~~~~~~~w~~~~~l~~~~~~~v~~r~~~~~~~~~~v~~~~~~~~~iSST 157 (189)
T 2qtr_A 79 RKGPSYTYDTMLQLTKKY-PDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPYPITTVEIPEFAVSSS 157 (189)
T ss_dssp SCSCCCHHHHHHHHHHHC-TTCEEEEEEEHHHHHHGGGSTTHHHHTTTCEEEEECCTTCCCCCSSCCEEECCCCCCCCHH
T ss_pred CCCCCCHHHHHHHHHHHC-CCCCEEEEEehhhhhhhhccCCHHHHHHhCCEEEEECCCCCccCCceEEEEcCCCCccCHH
Confidence 3445554443333 33 399999998765544567777777776666541 369999
Q ss_pred HHHHHHhhc
Q 022469 181 DIVGRMLLC 189 (296)
Q Consensus 181 ~Ir~rIl~~ 189 (296)
.||+++..+
T Consensus 158 ~IR~~l~~g 166 (189)
T 2qtr_A 158 LLRERYKEK 166 (189)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 999999754
No 15
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii}
Probab=99.70 E-value=2.1e-17 Score=142.13 Aligned_cols=128 Identities=20% Similarity=0.196 Sum_probs=85.7
Q ss_pred eEEEEeCcCCcCCHHHHHHHHHHHHhcCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHhcCCccEEEEcCCCC-ccHHH
Q 022469 52 VRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNAVKWVDEVISDAPYA-ITKDF 130 (296)
Q Consensus 52 ~rV~~~G~FD~vH~GH~~lL~qAk~lgd~LiVgV~sD~~i~~~Kg~pi~s~eER~~~l~~~k~VD~Vv~~~py~-~t~ef 130 (296)
.++++.|+|||+|.||+.++++|++++|+++|+++.++ .| +|+++.+||++|++.+...|.+.. .+|. .+.++
T Consensus 6 ~i~i~~GsFDPiH~GHl~li~~A~~~~d~viv~v~~~~----~K-~~~~~~~~R~~m~~~~~~~~~v~V-~~~~~l~~~~ 79 (162)
T 4f3r_A 6 PIAIYPGTFDPLTNGHVDIIERALPLFNKIIVACAPTS----RK-DPHLKLEERVNLIADVLTDERVEV-LPLTGLLVDF 79 (162)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHGGGCSEEEEEECCC-----------CCHHHHHHHHHHHCCCTTEEE-EECCSCHHHH
T ss_pred EEEEEEEEcCCCCHHHHHHHHHHHHHCCcEEEEEecCC----cc-CCCCCHHHHHHHHHHhhCCCCEEE-EeccchHHHH
Confidence 46999999999999999999999999999999999875 34 589999999999998544476644 3343 44555
Q ss_pred HHHHHHhcCccEEEEc----CCCCcCCCCCchHHHHHHCCeEEEcCCC---CCCCHHHHHHHHhhc
Q 022469 131 MKKLFDEYNIDYIIHG----DDPCVLPDGTDAYELAKKAGRYKQIKRT---EGVSSTDIVGRMLLC 189 (296)
Q Consensus 131 l~~ll~~~~~d~VV~G----dD~~fg~~g~d~y~~lk~~g~v~~v~rt---~~VSST~Ir~rIl~~ 189 (296)
+ ++++++++|.| .||.+..+-......+....+...+.++ ..||||.||+++..+
T Consensus 80 ~----~~~~~~~~v~G~r~~~Df~~e~~~a~~nr~l~~~ietv~l~~~~~~~~ISST~IRe~~~~g 141 (162)
T 4f3r_A 80 A----KTHQANFILRGLRAVSDFDYEFQLAHMNYQLSPEIETIFLPAREGYSYVSGTMVREIVTLG 141 (162)
T ss_dssp H----HHTTCCEEEEEECSHHHHHHHHHHHHHHHHHCTTCEEEEEECCGGGSSCCHHHHHHHHHTT
T ss_pred H----HHcCCCEEEECCCchhhhhhHHHHHHHHHHhCCCccEEEEECCcccccccHHHHHHHHHcC
Confidence 5 56899999999 4443210000000011112344444444 379999999998754
No 16
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A*
Probab=99.68 E-value=8.6e-16 Score=134.17 Aligned_cols=132 Identities=20% Similarity=0.117 Sum_probs=92.6
Q ss_pred eEEEEeCcCCcCCHHHHHHHHHHHHhc--CeEEEEEeCChhhhhcCC-CCCCCHHHHHHHHHh-cCCccEEEEcCCCC--
Q 022469 52 VRVYMDGCFDMMHYGHCNALRQARALG--DQLVVGVVSDAEIIANKG-PPVTPLHERMIMVNA-VKWVDEVISDAPYA-- 125 (296)
Q Consensus 52 ~rV~~~G~FD~vH~GH~~lL~qAk~lg--d~LiVgV~sD~~i~~~Kg-~pi~s~eER~~~l~~-~k~VD~Vv~~~py~-- 125 (296)
.++++.|+|||+|.||+.++++|++.+ +.+++.+++++. .|. +++++.+||++|++. ++++|.+.+ .+|+
T Consensus 8 ~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~~R~~ml~~a~~~~~~v~v-~~~e~~ 83 (194)
T 1kam_A 8 KIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPP---HKQNEDYTDSFHRVEMLKLAIQSNPSFKL-ELVEME 83 (194)
T ss_dssp EEEEEEECCSSCCHHHHHHHHHHHHHTTCSEEEEEECCCC------------CHHHHHHHHHHHHTTCTTEEE-CCGGGS
T ss_pred EEEEEEeccccccHHHHHHHHHHHHHhCCCEEEEEECCCCC---CcCCcCCCCHHHHHHHHHHHHcCCCCeEE-eHHHhc
Confidence 468999999999999999999999998 888888887652 343 578999999999995 788888766 4553
Q ss_pred -----ccHHHHHHHHHhcCcc---EEEEcCCCCcC-CCCCchHHHHHHCCeEEEcCCC-----------------CCCCH
Q 022469 126 -----ITKDFMKKLFDEYNID---YIIHGDDPCVL-PDGTDAYELAKKAGRYKQIKRT-----------------EGVSS 179 (296)
Q Consensus 126 -----~t~efl~~ll~~~~~d---~VV~GdD~~fg-~~g~d~y~~lk~~g~v~~v~rt-----------------~~VSS 179 (296)
++.++++.+..++ ++ ++|+|.|..++ ..|. .|+.+.....+.+++|. ..|||
T Consensus 84 ~~~~~~t~~~l~~l~~~~-p~~~~~~v~G~D~~~~~~~W~-~~e~i~~~~~~~v~~R~g~~~~l~~~i~~~~~~~~~ISS 161 (194)
T 1kam_A 84 REGPSYTFDTVSLLKQRY-PNDQLFFIIGADMIEYLPKWY-KLDELLNLIQFIGVKRPGFHVETPYPLLFADVPEFEVSS 161 (194)
T ss_dssp TTCCCSHHHHHHHHHHHS-TTSEEEEEEETTTTTTCCCCH-HHHHHHHHSEEEEEECSSCCCCCSSCCEEEECCCBCCCH
T ss_pred CCCCCChHHHHHHHHHHC-CCCcEEEEEecchhhhhcccc-CHHHHHHhCcEEEEECCCcchhcCCCEEEeCCCCCCcCH
Confidence 4556666655555 44 99999998765 3343 34433334444444432 26999
Q ss_pred HHHHHHHhhc
Q 022469 180 TDIVGRMLLC 189 (296)
Q Consensus 180 T~Ir~rIl~~ 189 (296)
|.||+++..+
T Consensus 162 T~IR~~i~~g 171 (194)
T 1kam_A 162 TMIRERFKSK 171 (194)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHcC
Confidence 9999999755
No 17
>1od6_A PPAT, phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.5A {Thermus thermophilus} SCOP: c.26.1.3
Probab=99.67 E-value=3.8e-16 Score=131.69 Aligned_cols=122 Identities=19% Similarity=0.255 Sum_probs=86.7
Q ss_pred EEEeCcCCcCCHHHHHHHHHHHHhcCeEEEEEeCChhhhhcCC-CCCCCHHHHHHHHHh-cCCccEEEEcCCCCccHHHH
Q 022469 54 VYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKG-PPVTPLHERMIMVNA-VKWVDEVISDAPYAITKDFM 131 (296)
Q Consensus 54 V~~~G~FD~vH~GH~~lL~qAk~lgd~LiVgV~sD~~i~~~Kg-~pi~s~eER~~~l~~-~k~VD~Vv~~~py~~t~efl 131 (296)
+++.|+|||+|.||+.++++|++.+|+++++++.++ .|. +++++.+||++|++. +.++|.+.. .+|+ +|.
T Consensus 3 ~v~~GsFdp~H~GH~~l~~~a~~~~d~v~v~~~~~p----~k~~~~~~~~~~R~~ml~~a~~~~~~v~v-~~~e---~~~ 74 (160)
T 1od6_A 3 VVYPGSFDPLTNGHLDVIQRASRLFEKVTVAVLENP----SKRGQYLFSAEERLAIIREATAHLANVEA-ATFS---GLL 74 (160)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHSSEEEEEEECC---------CCSSCHHHHHHHHHHHTTTCTTEEE-EEEC---SCH
T ss_pred EEEEeeeCCCCHHHHHHHHHHHHHCCEEEEEEcCCC----CCCCCCCCCHHHHHHHHHHHhcCCCCEEE-EecC---chH
Confidence 899999999999999999999999999988888665 243 468999999999995 678887765 4543 133
Q ss_pred HHHHHhcCccEEEEcCCCCcCCCCCchHHHHH-------HC---C-eEEEcCC--CCCCCHHHHHHHHhhc
Q 022469 132 KKLFDEYNIDYIIHGDDPCVLPDGTDAYELAK-------KA---G-RYKQIKR--TEGVSSTDIVGRMLLC 189 (296)
Q Consensus 132 ~~ll~~~~~d~VV~GdD~~fg~~g~d~y~~lk-------~~---g-~v~~v~r--t~~VSST~Ir~rIl~~ 189 (296)
.+++++++++++++|.|-. . .++.++ .. . .+..++. ...||||.||+++..+
T Consensus 75 ~~~l~~l~~~~~v~G~d~~-----~-~~~~~~~~~~~~r~~~~~~~~i~~~~~~~~~~ISST~IR~~l~~G 139 (160)
T 1od6_A 75 VDFVRRVGAQAIVKGLRAV-----S-DYEYELQMAHLNRQLYPGLETLFILAATRYSFVSSTMVKEIARYG 139 (160)
T ss_dssp HHHHHHTTCSEEEEEECTT-----S-CHHHHHHHHHHHHHHTTTCEEEEEECCGGGTTCCHHHHHHHHHTT
T ss_pred HHHHHHcCCCEEEEeCCcc-----c-chHHHHHHHHhCcCCCCCCCEEEEeCCCCCCcccHHHHHHHHHcC
Confidence 3345678999999998722 1 122222 11 1 2333332 2479999999999765
No 18
>3f3m_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway, coenzyme A biosynthesis, nucleotidyltransferase; HET: PPS; 2.40A {Staphylococcus aureus} SCOP: c.26.1.0
Probab=99.65 E-value=3.1e-16 Score=135.68 Aligned_cols=124 Identities=23% Similarity=0.295 Sum_probs=86.0
Q ss_pred eEEEEeCcCCcCCHHHHHHHHHHHHhcCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHh-cCCccEEEEcCCCC-ccHH
Q 022469 52 VRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNA-VKWVDEVISDAPYA-ITKD 129 (296)
Q Consensus 52 ~rV~~~G~FD~vH~GH~~lL~qAk~lgd~LiVgV~sD~~i~~~Kg~pi~s~eER~~~l~~-~k~VD~Vv~~~py~-~t~e 129 (296)
+++++.|+|||+|.||+.++++|++.+|+++|+++.++ .| +++++.+||++|++. ++..+.+.+ .+|+ ++.+
T Consensus 4 ki~i~~GsFDPiH~GHl~i~~~a~~~~d~viv~v~~~p----~K-~~~~~~~~R~~ml~~a~~~~~~v~v-~~~e~~tvd 77 (168)
T 3f3m_A 4 TIAVIPGSFDPITYGHLDIIERSTDRFDEIHVCVLKNS----KK-EGTFSLEERMDLIEQSVKHLPNVKV-HQFSGLLVD 77 (168)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHGGGSSEEEEEECC----------CCSCHHHHHHHHHHHTTTCTTEEE-EECCSCHHH
T ss_pred eEEEEEEEcCcCCHHHHHHHHHHHHhCCEEEEEEcCCC----CC-CCCCCHHHHHHhHHHHhcCCCCEEE-EEcCCCHHH
Confidence 46999999999999999999999999999999998765 34 589999999999996 566776644 3443 4556
Q ss_pred HHHHHHHhcCccEEEEcCCCCcCCCCCchHHH--H---HH----CCeEEEcCC--CCCCCHHHHHHHHhhc
Q 022469 130 FMKKLFDEYNIDYIIHGDDPCVLPDGTDAYEL--A---KK----AGRYKQIKR--TEGVSSTDIVGRMLLC 189 (296)
Q Consensus 130 fl~~ll~~~~~d~VV~GdD~~fg~~g~d~y~~--l---k~----~g~v~~v~r--t~~VSST~Ir~rIl~~ 189 (296)
++ +++++++++.|-|-..+ . .|+. . +. ...+...+. ...||||.||+++..+
T Consensus 78 ~~----~~l~~~~~I~G~d~~~d--~--~~e~~~a~~~r~l~~~~e~v~l~~~p~~~~ISST~IRe~~~~g 140 (168)
T 3f3m_A 78 YC----EQVGAKTIIRGLRAVSD--F--EYELRLTSMNKKLNNEIETLYMMSSTNYSFISSSIVKEVAAYR 140 (168)
T ss_dssp HH----HHHTCCEEEEEECTTCC--H--HHHHHHHHHHHHHCTTSEEEEEECCTTTTTCCHHHHHHHHHTT
T ss_pred HH----HHcCCCEEEEcCCchhh--h--hHHHHHhHHhHhhCCCCcEEEEeCCcccccccHHHHHHHHHcC
Confidence 65 45789999999653321 1 1221 0 11 112333222 2349999999998754
No 19
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3pnb_A* 4e1a_A 3lcj_A 3rba_A* 1tfu_A* 3rff_A 3rhs_A* 3uc5_A*
Probab=99.63 E-value=9.2e-16 Score=133.90 Aligned_cols=131 Identities=18% Similarity=0.163 Sum_probs=91.0
Q ss_pred CCCCeEEEEeCcCCcCCHHHHHHHHHHHHhcCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHh-cCCccEEEEcCCCC-
Q 022469 48 KKKPVRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNA-VKWVDEVISDAPYA- 125 (296)
Q Consensus 48 ~~~~~rV~~~G~FD~vH~GH~~lL~qAk~lgd~LiVgV~sD~~i~~~Kg~pi~s~eER~~~l~~-~k~VD~Vv~~~py~- 125 (296)
+.+++++++.|+|||+|.||+.++++|++++|+|+|++..++ .| +++++.+||++|++. ++..+.+.+ .+|+
T Consensus 18 ~~~mki~i~~GsFDPiH~GHl~ii~~A~~~~D~Viv~v~~np----~K-~~~~s~eeR~~mv~~a~~~~~~v~V-~~~e~ 91 (177)
T 3nbk_A 18 GSHMTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNP----AK-TGMFDLDERIAMVKESTTHLPNLRV-QVGHG 91 (177)
T ss_dssp --CCCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEECCCT----TS-CCSSCHHHHHHHHHHHCTTCTTEEE-EECCS
T ss_pred CCCCEEEEEEEeeCCCCHHHHHHHHHHHHHCCEEEEEEcCCC----CC-CCCCCHHHHHHHHHHHhCCCCCEEE-EecCc
Confidence 345567999999999999999999999999999999998775 44 478999999999996 666776655 3443
Q ss_pred ccHHHHHHHHHhcCccEEEEcCCCCcCCCCC----chHHHHHHCCeEEEcCC---CCCCCHHHHHHHHhhc
Q 022469 126 ITKDFMKKLFDEYNIDYIIHGDDPCVLPDGT----DAYELAKKAGRYKQIKR---TEGVSSTDIVGRMLLC 189 (296)
Q Consensus 126 ~t~efl~~ll~~~~~d~VV~GdD~~fg~~g~----d~y~~lk~~g~v~~v~r---t~~VSST~Ir~rIl~~ 189 (296)
++.+|+ +++++++++.|-+...+-+.+ .....+ ...+...+.. ...||||.||+++...
T Consensus 92 l~vd~~----~~~~a~~ivrGlr~~~Dfeye~~~a~~nr~l-~~ietvfl~~~~~~~~ISST~IRe~~~~g 157 (177)
T 3nbk_A 92 LVVDFV----RSCGMTAIVKGLRTGTDFEYELQMAQMNKHI-AGVDTFFVATAPRYSFVSSSLAKEVAMLG 157 (177)
T ss_dssp CHHHHH----HHTTCCEEEEEECTTCCHHHHHHHHHHHHHH-HCCEEEEEECCGGGSSCCHHHHHHHHHTT
T ss_pred hHHHHH----HHcCCCEEEECCCchhHHHHHHHHHHHHHhc-CCCceEEEeCCCcccccchHHHHHHHHcC
Confidence 456666 468999999994422110000 000112 3333333332 3579999999987643
No 20
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A*
Probab=99.62 E-value=1.4e-15 Score=134.86 Aligned_cols=92 Identities=21% Similarity=0.236 Sum_probs=75.8
Q ss_pred EEEeCcCCcCCHHHHHHHHHHHHhc--CeEEEEEeCChhhhhcCCCCCCCHHHHHHHHH-hcCCccEEEEcCCCC-----
Q 022469 54 VYMDGCFDMMHYGHCNALRQARALG--DQLVVGVVSDAEIIANKGPPVTPLHERMIMVN-AVKWVDEVISDAPYA----- 125 (296)
Q Consensus 54 V~~~G~FD~vH~GH~~lL~qAk~lg--d~LiVgV~sD~~i~~~Kg~pi~s~eER~~~l~-~~k~VD~Vv~~~py~----- 125 (296)
+++.|+|||+|.||+.++++|++.+ |++++.++.++. .|..++++.+||++|++ +++++|.+.+ .+|+
T Consensus 6 ~i~~GsFdPiH~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~R~~ml~~a~~~~~~v~v-~~~e~~~~~ 81 (213)
T 1k4m_A 6 ALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPP---HRPQPEANSVQRKHMLELAIADKPLFTL-DERELKRNA 81 (213)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHTCSCEEEEECSSCT---TSCCCSSCHHHHHHHHHHHHTTCTTEEE-CCHHHHCSS
T ss_pred EEEEeCcCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCC---CCCCCCCCHHHHHHHHHHHhccCCCEEE-eHHHhcCCC
Confidence 8999999999999999999999987 888888887652 34346899999999999 5778888776 4543
Q ss_pred --ccHHHHHHHHHhcCcc---EEEEcCCC
Q 022469 126 --ITKDFMKKLFDEYNID---YIIHGDDP 149 (296)
Q Consensus 126 --~t~efl~~ll~~~~~d---~VV~GdD~ 149 (296)
++.+|++.+.++++++ ++++|.|.
T Consensus 82 ~s~t~~~l~~l~~~~~~~~~~~~i~G~D~ 110 (213)
T 1k4m_A 82 PSYTAQTLKEWRQEQGPDVPLAFIIGQDS 110 (213)
T ss_dssp CCCHHHHHHHHHHHHCTTSCEEEEEEHHH
T ss_pred CCcHHHHHHHHHHHhCCCCcEEEEEehhh
Confidence 4578888776777899 99999975
No 21
>3nd5_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway; 2.30A {Enterococcus faecalis} SCOP: c.26.1.0 PDB: 3nd6_A* 3nd7_A*
Probab=99.59 E-value=1.3e-15 Score=132.12 Aligned_cols=127 Identities=17% Similarity=0.190 Sum_probs=84.9
Q ss_pred eEEEEeCcCCcCCHHHHHHHHHHHHhcCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHh-cCCccEEEEcCCC-CccHH
Q 022469 52 VRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNA-VKWVDEVISDAPY-AITKD 129 (296)
Q Consensus 52 ~rV~~~G~FD~vH~GH~~lL~qAk~lgd~LiVgV~sD~~i~~~Kg~pi~s~eER~~~l~~-~k~VD~Vv~~~py-~~t~e 129 (296)
+++++.|+|||+|.||+.++++|++++|+++|++..++ .| +|+++.+||++|++. ++.++.+.+..+| ..+.+
T Consensus 3 ~i~i~~GsFDPiH~GHl~i~~~a~~~~D~viv~v~~~~----~K-~~~~~~~~R~~ml~~a~~~~~~v~v~~~~e~~tvd 77 (171)
T 3nd5_A 3 KIALFPGSFDPMTNGHLNLIERSAKLFDEVIIGVFINT----SK-QTLFTPEEKKYLIEEATKEMPNVRVIMQETQLTVE 77 (171)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHTTCSEEEEEEEC-----------CCCHHHHHHHHHHHHTTCTTEEEEEECSSCHHH
T ss_pred eEEEEEEEccccCHHHHHHHHHHHHHCCCeEEEEecCC----CC-CCCCCHHHHHHHHHHHHccCCCEEEeeCCCCcHHH
Confidence 36899999999999999999999999999999997765 34 479999999999995 6778777441223 24566
Q ss_pred HHHHHHHhcCccEEEEcCCCCcCCCCCchHHH--H-HH----CCeEEEcCC--CCCCCHHHHHHHHhhc
Q 022469 130 FMKKLFDEYNIDYIIHGDDPCVLPDGTDAYEL--A-KK----AGRYKQIKR--TEGVSSTDIVGRMLLC 189 (296)
Q Consensus 130 fl~~ll~~~~~d~VV~GdD~~fg~~g~d~y~~--l-k~----~g~v~~v~r--t~~VSST~Ir~rIl~~ 189 (296)
++ +++++++++.|.|-..+ .+.-.++ + +. ...+...+. ...||||.||+++..+
T Consensus 78 ~~----~~l~~~~~i~G~~~~~d--~~~e~~la~~nr~l~~~~etv~l~~~~~~~~ISST~IRe~~~~g 140 (171)
T 3nd5_A 78 SA----KSLGANFLIRGIRNVKD--YEYEKDIAKMNQHLAPEIETVFLLAEEPYAHVSSSLLKEVLRFG 140 (171)
T ss_dssp HH----HHHTCCEEEEEECSHHH--HHHHHHHHHHHHHHCTTSEEEEEECCGGGTTCCHHHHHHHHHTT
T ss_pred HH----HHCCCCEEEECCCchhh--hHHHHHHHHHhhhhcCCccEEEEeCCccccccchHHHHHHHHcC
Confidence 66 45689999999553211 0000000 0 11 112333322 3479999999998754
No 22
>1vlh_A Phosphopantetheine adenylyltransferase; TM0741, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: PNS; 2.20A {Thermotoga maritima} SCOP: c.26.1.3
Probab=99.58 E-value=3.5e-15 Score=128.95 Aligned_cols=123 Identities=24% Similarity=0.270 Sum_probs=87.2
Q ss_pred eEEEEeCcCCcCCHHHHHHHHHHHHhcCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHH-hcCCccEEEEcCCCC-ccHH
Q 022469 52 VRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVN-AVKWVDEVISDAPYA-ITKD 129 (296)
Q Consensus 52 ~rV~~~G~FD~vH~GH~~lL~qAk~lgd~LiVgV~sD~~i~~~Kg~pi~s~eER~~~l~-~~k~VD~Vv~~~py~-~t~e 129 (296)
..+++.|+|||+|.||+.++++|++++|+|+|++.+++ .| +++++.+||++|++ +++.++.+.. .+|. ++.+
T Consensus 13 ~i~i~~GsFdP~H~GHl~l~~~A~~~~D~viv~v~~~~----~k-k~~~~~~~R~~ml~~a~~~~~~v~v-~~~e~~tvd 86 (173)
T 1vlh_A 13 MKAVYPGSFDPITLGHVDIIKRALSIFDELVVLVTENP----RK-KCMFTLEERKKLIEEVLSDLDGVKV-DVHHGLLVD 86 (173)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHTTCSEEEEEEECCT----TC-CCSSCHHHHHHHHHHHTTTCTTEEE-EEECSCHHH
T ss_pred eEEEEEEEECcCcHHHHHHHHHHHHHCCEEEEEEeCCC----CC-CCCCCHHHHHHHHHHHhcCCCCEEE-ecCcchHHH
Confidence 46999999999999999999999999999999999975 23 37899999999999 6888887755 3333 4555
Q ss_pred HHHHHHHhcCccEEEEcCCCCcCCCCCch---HH--HH-HHC---CeEEEcCC---CCCCCHHHHHHHHhhc
Q 022469 130 FMKKLFDEYNIDYIIHGDDPCVLPDGTDA---YE--LA-KKA---GRYKQIKR---TEGVSSTDIVGRMLLC 189 (296)
Q Consensus 130 fl~~ll~~~~~d~VV~GdD~~fg~~g~d~---y~--~l-k~~---g~v~~v~r---t~~VSST~Ir~rIl~~ 189 (296)
++ +++++++++.|-. .|.|- .. .. +.. .....+.. .+.||||.||+++...
T Consensus 87 ~l----~~l~~~~~i~gl~-----~w~d~~~~~~~~~~~r~~~~~~~~i~l~~~~~~~~iSST~IR~~i~~g 149 (173)
T 1vlh_A 87 YL----KKHGIKVLVRGLR-----AVTDYEYELQMALANKKLYSDLETVFLIASEKFSFISSSLVKEVALYG 149 (173)
T ss_dssp HH----HHHTCCEEEEEEC-----TTSCHHHHHHHHHHHHHHSTTCEEEEEECCGGGTTCCHHHHHHHHHTT
T ss_pred HH----HHhCCCeEEeCCC-----cccchhhccchhhcCCCCCCCCcEEEEeCCCCCCceeHHHHHHHHHcC
Confidence 55 4578899998832 12210 10 11 111 12222222 2469999999998754
No 23
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A*
Probab=99.57 E-value=1.1e-14 Score=132.26 Aligned_cols=94 Identities=22% Similarity=0.296 Sum_probs=76.0
Q ss_pred CeEEEEeCcCCcCCHHHHHHHHHHHHhc--CeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHh-cCCccEEEEcCCCC--
Q 022469 51 PVRVYMDGCFDMMHYGHCNALRQARALG--DQLVVGVVSDAEIIANKGPPVTPLHERMIMVNA-VKWVDEVISDAPYA-- 125 (296)
Q Consensus 51 ~~rV~~~G~FD~vH~GH~~lL~qAk~lg--d~LiVgV~sD~~i~~~Kg~pi~s~eER~~~l~~-~k~VD~Vv~~~py~-- 125 (296)
+.++++.|+|||+|.||+.++++|++.+ |+++++++.++. .|..++++.+||++|++. +++++.+.+ .+|.
T Consensus 23 ~~i~i~~GsFdPiH~GHl~li~~a~~~~~ld~v~v~~~~~~p---~K~~~~~~~~~R~~ml~~a~~~~~~v~v-~~~e~~ 98 (242)
T 1yum_A 23 KRIGLFGGTFDPVHIGHMRSAVEMAEQFALDELRLLPNARPP---HRETPQVSAAQRLAMVERAVAGVERLTV-DPRELQ 98 (242)
T ss_dssp CEEEEEEECCTTCCHHHHHHHHHHHHHHTCSEEEEEECCCCG---GGSCTTCCHHHHHHHHHHHHTTCTTEEE-CCGGGG
T ss_pred ceEEEEEeeCcHhhHHHHHHHHHHHHHcCCCEEEEEEcCCCC---CCCCCCCCHHHHHHHHHHHhcCCCeEEE-eeeeec
Confidence 3468999999999999999999999998 899999988752 243468999999999994 778888766 4553
Q ss_pred -----ccHHHHHHHHHhcCcc---EEEEcCC
Q 022469 126 -----ITKDFMKKLFDEYNID---YIIHGDD 148 (296)
Q Consensus 126 -----~t~efl~~ll~~~~~d---~VV~GdD 148 (296)
++.++++.+-.+++++ ++++|.|
T Consensus 99 ~~~~sytvdtl~~l~~~~~p~~~~~fI~G~D 129 (242)
T 1yum_A 99 RDKPSYTIDTLESVRAELAADDQLFMLIGWD 129 (242)
T ss_dssp SSSSCCHHHHHHHHHHHSCTTCEEEEEEEHH
T ss_pred CCCCCCHHHHHHHHHHHhCCCCcEEEEEehh
Confidence 5678887766667677 8899986
No 24
>2h29_A Probable nicotinate-nucleotide adenylyltransferase; NADD, namnat, nmnat; HET: DND; 2.00A {Staphylococcus aureus} PDB: 2h2a_A*
Probab=99.50 E-value=4.5e-14 Score=122.77 Aligned_cols=132 Identities=19% Similarity=0.129 Sum_probs=91.9
Q ss_pred eEEEEeCcCCcCCHHHHHHHHHHHHhc--CeEEEEEeCChhhhhcCC-CCCCCHHHHHHHHHh-cCCccEEEEcCCC---
Q 022469 52 VRVYMDGCFDMMHYGHCNALRQARALG--DQLVVGVVSDAEIIANKG-PPVTPLHERMIMVNA-VKWVDEVISDAPY--- 124 (296)
Q Consensus 52 ~rV~~~G~FD~vH~GH~~lL~qAk~lg--d~LiVgV~sD~~i~~~Kg-~pi~s~eER~~~l~~-~k~VD~Vv~~~py--- 124 (296)
.++++.|+|||+|.||+.++++|++.+ +.+++.++.++. .|+ .++++.+||++|++. ++..+.+.+ .+|
T Consensus 3 ~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~~R~~m~~~a~~~~~~v~v-~~~e~~ 78 (189)
T 2h29_A 3 KIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSP---LKKHHDFIDVQHRLTMIQMIIDELGFGDI-CDDEIK 78 (189)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHHHCCSEEEEEECSBCT---TSCCCSSCCCHHHHHHHHHHHHHHTCCEE-CCHHHH
T ss_pred eEEEEEecCCcccHHHHHHHHHHHHHcCCCEEEEEECCCCC---CCcCCCCCCHHHHHHHHHHHHcCCCCEEE-ehHHhc
Confidence 358999999999999999999999987 788777776653 343 578999999999985 555554444 222
Q ss_pred ----CccHHHHHHHHHhcCcc---EEEEcCCCCc-CCCCCchHHHHHHCCeEEEcCCC-----------------CCCCH
Q 022469 125 ----AITKDFMKKLFDEYNID---YIIHGDDPCV-LPDGTDAYELAKKAGRYKQIKRT-----------------EGVSS 179 (296)
Q Consensus 125 ----~~t~efl~~ll~~~~~d---~VV~GdD~~f-g~~g~d~y~~lk~~g~v~~v~rt-----------------~~VSS 179 (296)
.++.++++.+.+.+ ++ +++.|.|... ...|.+. +.+-....+.+++|. ..|||
T Consensus 79 ~~~~syt~dtl~~l~~~~-p~~~~~~i~G~D~~~~~~~W~~~-~~i~~~~~~~v~~R~~~~~~~~~~i~~~~~~~~~ISS 156 (189)
T 2h29_A 79 RGGQSYTYDTIKAFKEQH-KDSELYFVIGTDQYNQLEKWYQI-EYLKEMVTFVVVNRDKNSQNVENAMIAIQIPRVDISS 156 (189)
T ss_dssp HCSBCCHHHHHHHHHHHS-TTEEEEEEEEHHHHTTGGGSTTH-HHHHHHCEEEEECCSSSCCCCCTTSEEECCCCBCCCH
T ss_pred CCCCCCHHHHHHHHHHHC-CCCcEEEEEecchhhhhccccCH-HHHHhhCcEEEEECCCCccccCCcEEEEcCCCCccCH
Confidence 24667777665545 55 9999988421 2345533 333334455555553 36999
Q ss_pred HHHHHHHhhc
Q 022469 180 TDIVGRMLLC 189 (296)
Q Consensus 180 T~Ir~rIl~~ 189 (296)
|.||+++...
T Consensus 157 T~IR~~i~~g 166 (189)
T 2h29_A 157 TMIRQRVSEG 166 (189)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHcC
Confidence 9999998754
No 25
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.48 E-value=1e-13 Score=128.96 Aligned_cols=130 Identities=17% Similarity=0.063 Sum_probs=88.8
Q ss_pred CeEEEEeCcCCcCCHHHHHHHHHHHHhcCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHhcCCccE----EEEcCCCC-
Q 022469 51 PVRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNAVKWVDE----VISDAPYA- 125 (296)
Q Consensus 51 ~~rV~~~G~FD~vH~GH~~lL~qAk~lgd~LiVgV~sD~~i~~~Kg~pi~s~eER~~~l~~~k~VD~----Vv~~~py~- 125 (296)
+.+++++|+|||+|.||+.++++|++.+|+++|+|.+++.. .+....++.++|++|++.. ..|. ++. .++.
T Consensus 7 ~~~~i~~G~FdP~H~GH~~li~~a~~~~d~v~v~v~~~~~p--~~~~~~~~~~~R~~m~~~~-~~~~~~~~~~~-i~~~d 82 (341)
T 2qjo_A 7 YQYGIYIGRFQPFHLGHLRTLNLALEKAEQVIIILGSHRVA--ADTRNPWRSPERMAMIEAC-LSPQILKRVHF-LTVRD 82 (341)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHEEEEEEEEEEETCC--CCSSSCSCHHHHHHHHHTT-SCHHHHTTEEE-EEEEC
T ss_pred eeEEEEEEEeCCCCHHHHHHHHHHHHhCCeEEEEECCcccC--CCCCCCCCHHHHHHHHHHH-hhhccCCeEEE-EECCC
Confidence 35799999999999999999999999999988888776422 2223458999999999975 3343 332 2221
Q ss_pred ----c--cHHHHHHHHHhcC---ccEEEEcCCCCcCCCCCchHHHHHH--CCeEEEcCCCCCCCHHHHHHHHhhch
Q 022469 126 ----I--TKDFMKKLFDEYN---IDYIIHGDDPCVLPDGTDAYELAKK--AGRYKQIKRTEGVSSTDIVGRMLLCV 190 (296)
Q Consensus 126 ----~--t~efl~~ll~~~~---~d~VV~GdD~~fg~~g~d~y~~lk~--~g~v~~v~rt~~VSST~Ir~rIl~~~ 190 (296)
. -.+|++++++.+. ++++++|.++.... . ..+. ...+..++....||||.||+++..+.
T Consensus 83 ~~~~~~~w~~~~~~l~~~l~r~~~~~~~~g~~~~~~~----~--~~~~~~~~~~~~~~~~~~iSST~IR~~l~~g~ 152 (341)
T 2qjo_A 83 WLYSDNLWLAAVQQQVLKITGGSNSVVVLGHRKDASS----Y--YLNLFPQWDYLETGHYPDFSSTAIRGAYFEGK 152 (341)
T ss_dssp CTTCHHHHHHHHHHHHHHHHTTCSCEEEEECCCSGGG----G--GGGSCTTSEEEECCCCTTCCHHHHHHHHHHTC
T ss_pred CcCChHHHHHHHHHHhHHhcCCCceEEEEcCCCCCCh----H--HHHhccccceeecccCCCCCcHHHHHHHHcCC
Confidence 1 1455555555433 78999998874211 1 1121 23556666567899999999998553
No 26
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii}
Probab=99.47 E-value=3.6e-13 Score=129.02 Aligned_cols=134 Identities=22% Similarity=0.251 Sum_probs=97.9
Q ss_pred CCeEEEEeCcCCcCCHHHHHHHHHHHHhcCeEEEEEeCChh--hhhcCC-CCCCCHHHHHHHHHhcCCccEEEEcCCCCc
Q 022469 50 KPVRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAE--IIANKG-PPVTPLHERMIMVNAVKWVDEVISDAPYAI 126 (296)
Q Consensus 50 ~~~rV~~~G~FD~vH~GH~~lL~qAk~lgd~LiVgV~sD~~--i~~~Kg-~pi~s~eER~~~l~~~k~VD~Vv~~~py~~ 126 (296)
.+..|+++|.|||+|.||+.+|++|++ .+ ++++|.+-+. +. ++ +.+++.++|.++++.+ +||.|++ .||.+
T Consensus 51 ~~~~v~~lG~FDg~H~GHq~lI~~a~~-~~-~~~~Vms~~~~~vq--rg~~~l~~~~~R~~~~~~~-GvD~vie-lpF~~ 124 (357)
T 3gmi_A 51 KDKIVCDFTEYNPLHKGHKYALEKGKE-HG-IFISVLPGPLERSG--RGIPYFLNRYIRAEMAIRA-GADIVVE-GPPMG 124 (357)
T ss_dssp CCCEEEEECCCTTCCHHHHHHHHHHHT-SS-EEEEEECCTTSBCT--TSSBCSSCHHHHHHHHHHH-TCSEEEE-CCCGG
T ss_pred CCCEEEEEEecCccCHHHHHHHHHHHH-cC-CeEEEEcCchHHhc--CCCCcCCCHHHHHHHHHHC-CCCEEEE-cCchh
Confidence 334699999999999999999999999 54 5555555332 32 33 6799999999999998 8999999 88853
Q ss_pred ---cHHHHHH---HHHhcCccEEEEcCCCCcC--------CC------------------------CCchHH-------H
Q 022469 127 ---TKDFMKK---LFDEYNIDYIIHGDDPCVL--------PD------------------------GTDAYE-------L 161 (296)
Q Consensus 127 ---t~efl~~---ll~~~~~d~VV~GdD~~fg--------~~------------------------g~d~y~-------~ 161 (296)
+.+|++. ++.++++++||+|...... .. ..+++- .
T Consensus 125 ~~s~~~Fv~~~v~ll~~l~~~~iv~G~~~~~~~~~~~~~i~~~~~~~~kp~~~~g~ey~~~~~~~l~~pn~il~~y~kai 204 (357)
T 3gmi_A 125 IMGSGQYMRCLIKMFYSLGAEIIPRGYIPEKTMEKVIDCINKGYHIQVKPYKIICIETGEILGEKLNIDNYVIASMSQMI 204 (357)
T ss_dssp GSCHHHHHHHHHHHHHHHTCCEEEEEECCCHHHHHHHHHHHTTCCEEEETTEEEETTTCCEEESCCCGGGHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEECCCCchhHHHHHHHHhcccccccccchhccCcHHHHHHHhccCCChHHHHHHHHH
Confidence 4789876 7888999999999822110 00 012222 2
Q ss_pred HHHC-------CeEEEcCCCCCCCHHHHHHHHhhc
Q 022469 162 AKKA-------GRYKQIKRTEGVSSTDIVGRMLLC 189 (296)
Q Consensus 162 lk~~-------g~v~~v~rt~~VSST~Ir~rIl~~ 189 (296)
.+.. -++.+++|...+|.|.||+.|...
T Consensus 205 ~~~~~~~~~~~i~~~~i~R~~~~SAS~IR~~i~~g 239 (357)
T 3gmi_A 205 YKLNREGLKFNPKFVFVKRLEGISGTKIREAIFSG 239 (357)
T ss_dssp HHHHHTTCCCCCEEEEEECSCCCCHHHHHHHHHTT
T ss_pred HHhCcCcCCCCCeEEEecCCCcccHHHHHHHHHcC
Confidence 2211 256778887789999999999864
No 27
>3do8_A Phosphopantetheine adenylyltransferase; protein with unknown function, structural genomics, MCSG, PSI-2, protein structure initiative; 1.60A {Archaeoglobus fulgidus}
Probab=99.45 E-value=2e-14 Score=121.77 Aligned_cols=124 Identities=23% Similarity=0.302 Sum_probs=84.0
Q ss_pred EEEEeCcCCcCCHHHHHHHHHHHHhc-CeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHh-c-CC----ccEEEEcCCCC
Q 022469 53 RVYMDGCFDMMHYGHCNALRQARALG-DQLVVGVVSDAEIIANKGPPVTPLHERMIMVNA-V-KW----VDEVISDAPYA 125 (296)
Q Consensus 53 rV~~~G~FD~vH~GH~~lL~qAk~lg-d~LiVgV~sD~~i~~~Kg~pi~s~eER~~~l~~-~-k~----VD~Vv~~~py~ 125 (296)
+|++.|+||++|.||+.++++|.+++ |+++|++++++...+. ..++++.+||++|++. + +. +..+-+..+|.
T Consensus 2 ~~i~gGtFDPiH~GHl~l~~~a~~~~~d~viv~v~~~~~~~k~-~~~~~~~~~R~~ml~~a~~~~~~~~~~i~~i~D~~g 80 (148)
T 3do8_A 2 KVALGGTFEPLHEGHKKLIDVAIKLGGRDITIGVTSDRMARAR-IRSVLPFAIRAENVKRYVMRKYGFEPEIVKITNPYG 80 (148)
T ss_dssp CEEEEECCSSCCHHHHHHHHHHHHHHTTCEEEEEECHHHHHHH-SCCCSCHHHHHHHHHHHHHHHHSSCCEEEEECSTTT
T ss_pred EEEEEeeCCCCCHHHHHHHHHHHHhCCCEEEEEECCCcccccc-CCCCCCHHHHHHHHHHHHhcccCCcEEEEeecCCCC
Confidence 68999999999999999999999997 8999999998855221 3589999999999887 3 21 22222224443
Q ss_pred ccHHHHHHHHHhcCccEEEEcCCCCcCCCCCchHH-HHHH-CC---eEEEcCCC-----CCCCHHHHHHHHhh
Q 022469 126 ITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYE-LAKK-AG---RYKQIKRT-----EGVSSTDIVGRMLL 188 (296)
Q Consensus 126 ~t~efl~~ll~~~~~d~VV~GdD~~fg~~g~d~y~-~lk~-~g---~v~~v~rt-----~~VSST~Ir~rIl~ 188 (296)
.+. ..++|++|++.+-..+ ..... +.++ .. .+.+++.. ..||||.||++|+.
T Consensus 81 ~~~--------~~~~d~ivvs~Et~~~---~~~l~~~~~~~G~~~l~V~~v~~~~~~~~~~iSST~IR~~~id 142 (148)
T 3do8_A 81 KTL--------DVDFEYLVVSPETYEM---ALKINQKREELGKRKITIVKVDWMMAEDGKPISSTRIKRGEID 142 (148)
T ss_dssp TTT--------TSCCSEEEECTTTHHH---HHHHHHHHHHHTCCCCEEEEEECCC-------CCCCCCCSCCC
T ss_pred CCC--------CCCCCEEEEChhhccc---HHHHHHHHHHcCCCeeEEEEeccEEcCCCCEEEHHHHHHHHHh
Confidence 321 2578999999875432 11111 1122 34 56665553 46999999998864
No 28
>1ej2_A Nicotinamide mononucleotide adenylyltransferase; dinucleotide binding fold, structural genomics, PSI; HET: NAD; 1.90A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.26.1.3 PDB: 1m8g_A* 1hyb_A* 1m8j_A* 1m8f_A* 1m8k_A*
Probab=99.45 E-value=4e-13 Score=116.20 Aligned_cols=123 Identities=17% Similarity=0.145 Sum_probs=83.4
Q ss_pred EEEEeCcCCcCCHHHHHHHHHHHHhcCeEEEEE-eCChhhhhcCCCCCCCHHHHHHHHHhc-CCc----cEEEEcCCCC-
Q 022469 53 RVYMDGCFDMMHYGHCNALRQARALGDQLVVGV-VSDAEIIANKGPPVTPLHERMIMVNAV-KWV----DEVISDAPYA- 125 (296)
Q Consensus 53 rV~~~G~FD~vH~GH~~lL~qAk~lgd~LiVgV-~sD~~i~~~Kg~pi~s~eER~~~l~~~-k~V----D~Vv~~~py~- 125 (296)
++++.|+|||+|.||+.++++|++.++++++++ +.++ ..|..++++.+||++|++.. ... |.+++ .+++
T Consensus 5 ~~i~~G~Fdp~H~GH~~l~~~a~~~~d~v~v~v~~~~~---p~~~~~~~~~~~R~~~~~~a~~~~~~~~~~v~v-~~~d~ 80 (181)
T 1ej2_A 5 RGLLVGRMQPFHRGHLQVIKSILEEVDELIICIGSAQL---SHSIRDPFTAGERVMMLTKALSENGIPASRYYI-IPVQD 80 (181)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHTTTCSEEEEEECSTTC---CSSSSSCSCHHHHHHHHHHHHHHTTCCGGGEEE-EECCC
T ss_pred EEEEEEEcCCcCHHHHHHHHHHHHhCCeeEEEECCCCC---CcCCCCCCCHHHHHHHHHHHHhhCCCCCCcEEE-EecCc
Confidence 699999999999999999999999999998888 4443 22334578999999999873 322 34433 2332
Q ss_pred --cc---HHHHHHHHHhcCccEEEEcCCCCcCCCCCchHHHHHH-CCeEEEcCCCC--CCCHHHHHHHHhhc
Q 022469 126 --IT---KDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKK-AGRYKQIKRTE--GVSSTDIVGRMLLC 189 (296)
Q Consensus 126 --~t---~efl~~ll~~~~~d~VV~GdD~~fg~~g~d~y~~lk~-~g~v~~v~rt~--~VSST~Ir~rIl~~ 189 (296)
.. .+|++++. ..++.+++|.|+. -.+.+. ...+..++..+ .||||.||+++..+
T Consensus 81 ~~~~~~w~~~~~~l~--~~~~~~v~gr~~~--------~~~~~~~~i~~~~~~~~~~~~ISST~IR~~l~~G 142 (181)
T 1ej2_A 81 IECNALWVGHIKMLT--PPFDRVYSGNPLV--------QRLFSEDGYEVTAPPLFYRDRYSGTEVRRRMLDD 142 (181)
T ss_dssp CSCHHHHHHHHHHHS--CCCSEEECCCHHH--------HHHHHHTTCCEECCCCSSTTTSSHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHC--CCCCEEEECCHHH--------HHHHHhCCeEEEecCCCccCcCcHHHHHHHHHcC
Confidence 11 23333322 4788999986641 122332 33455566543 59999999999754
No 29
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus}
Probab=99.41 E-value=4.8e-13 Score=116.34 Aligned_cols=132 Identities=16% Similarity=0.115 Sum_probs=91.3
Q ss_pred eEEEEeCcCCcCCHHHHHHHHHHHHhcCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHh-cCCcc--EEEEc-------
Q 022469 52 VRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNA-VKWVD--EVISD------- 121 (296)
Q Consensus 52 ~rV~~~G~FD~vH~GH~~lL~qAk~lgd~LiVgV~sD~~i~~~Kg~pi~s~eER~~~l~~-~k~VD--~Vv~~------- 121 (296)
.++++.|+|||+|.||+.+++ |.+..|++++++..+. ..| +++.+.++|++|++. ++..+ .+...
T Consensus 3 ~igi~gGsFdPih~GHl~i~~-a~~~~d~v~~~p~~~~---~~k-~~~~~~~~R~~m~~~a~~~~~~~~~~v~~~E~~l~ 77 (177)
T 3h05_A 3 KIAIFGSAFNPPSLGHKSVIE-SLSHFDLVLLEPSIAH---AWG-KNMLDYPIRCKLVDAFIKDMGLSNVQRSDLEQALY 77 (177)
T ss_dssp EEEEEEECCSSCCHHHHHHHT-TCTTSSEEEEEECC-----------CCCHHHHHHHHHHHHHHHCCTTEEECCHHHHHC
T ss_pred EEEEEEeccchhhHHHHHHHH-HHHHCCEEEEEECCCC---CCC-CCCCCHHHHHHHHHHHHhcCCCCcEEEEehhhhcc
Confidence 368999999999999999998 7777799999888752 123 468999999999986 32211 22210
Q ss_pred -CC-CCccHHHHHHHHHhc-Ccc-EEEEcCCCC-cCCCCCchHHHHHHCCeEEEcCCCCCCCHHHHHHHHhhc
Q 022469 122 -AP-YAITKDFMKKLFDEY-NID-YIIHGDDPC-VLPDGTDAYELAKKAGRYKQIKRTEGVSSTDIVGRMLLC 189 (296)
Q Consensus 122 -~p-y~~t~efl~~ll~~~-~~d-~VV~GdD~~-fg~~g~d~y~~lk~~g~v~~v~rt~~VSST~Ir~rIl~~ 189 (296)
.. .+.|.+.++.+.+.+ +.+ ++++|.|.- ..+.|.+ ++.+-+...+.+++|...||||+||+++...
T Consensus 78 ~~~~~syT~dTl~~l~~~~p~~~~~~iiG~D~l~~l~~W~~-~~~l~~~~~~vv~~r~~~iSST~IR~~i~~g 149 (177)
T 3h05_A 78 QPGQSVTTYALLEKIQEIYPTADITFVIGPDNFFKFAKFYK-AEEITERWTVMACPEKVKIRSTDIRNALIEG 149 (177)
T ss_dssp ----CCCHHHHHHHHHHHSTTSEEEEEECHHHHHTGGGSTT-HHHHHHHSEEEECCCSSCCCHHHHHHHHHHT
T ss_pred cCCCCcchHHHHHHHHHHhcCCCeEEEEecchhhhcccchh-HHHHHHhCCEEEEcCCCCCcHHHHHHHHHcC
Confidence 01 345667777665555 234 688999843 3345665 4555555689999998999999999999865
No 30
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3
Probab=99.38 E-value=6.7e-12 Score=107.27 Aligned_cols=126 Identities=18% Similarity=0.228 Sum_probs=79.7
Q ss_pred EEEEeCcCCcCCHHHHHHHHHHHHhcCeEEEEE-eCChhhhhcCCCCCCCHHHHHHHHHh-cCCcc-EEEE--cCCCCcc
Q 022469 53 RVYMDGCFDMMHYGHCNALRQARALGDQLVVGV-VSDAEIIANKGPPVTPLHERMIMVNA-VKWVD-EVIS--DAPYAIT 127 (296)
Q Consensus 53 rV~~~G~FD~vH~GH~~lL~qAk~lgd~LiVgV-~sD~~i~~~Kg~pi~s~eER~~~l~~-~k~VD-~Vv~--~~py~~t 127 (296)
++++.|+|||+|.||+.++++|++.+|++++++ +.++ ..|..+.++.+||++|++. ++..+ .+.. -..+...
T Consensus 2 i~i~~GsFdp~H~GH~~l~~~a~~~~d~v~v~v~~~~~---p~~~~~~~~~~~R~~m~~~~~~~~~~~v~v~~~d~l~~~ 78 (168)
T 1f9a_A 2 RGFIIGRFQPFHKGHLEVIKKIAEEVDEIIIGIGSAQK---SHTLENPFTAGERILMITQSLKDYDLTYYPIPIKDIEFN 78 (168)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHTTTCSEEEEEECSTTC---CSSSSCCSCHHHHHHHHHHHHTTSSCEEEEEECCCCSCG
T ss_pred EEEEEEecCCcCHHHHHHHHHHHHhCCeEEEEEcCCCC---CCCCCCCCCHHHHHHHHHHHHhcCCCceEEEeeCCcccH
Confidence 589999999999999999999999999998888 5554 1233346799999999986 55555 4422 1111111
Q ss_pred HHHHHHHHH-hcCccEEEEcCCCCcCCCCCchHHHHHH-CCeEEEcCCCC--CCCHHHHHHHHhhc
Q 022469 128 KDFMKKLFD-EYNIDYIIHGDDPCVLPDGTDAYELAKK-AGRYKQIKRTE--GVSSTDIVGRMLLC 189 (296)
Q Consensus 128 ~efl~~ll~-~~~~d~VV~GdD~~fg~~g~d~y~~lk~-~g~v~~v~rt~--~VSST~Ir~rIl~~ 189 (296)
..+.+.+.+ ...++.++.|.+. ...++.. ...+...+..+ .||||.||+++..+
T Consensus 79 ~~w~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~i~~~~~~~~~~~~ISST~IR~~~~~g 136 (168)
T 1f9a_A 79 SIWVSYVESLTPPFDIVYSGNPL--------VRVLFEERGYEVKRPEMFNRKEYSGTEIRRRMLNG 136 (168)
T ss_dssp GGHHHHHHHHSCCCSEEECCCHH--------HHHHHHHTTCEEECCCCCSTTTSSHHHHHHHHHHT
T ss_pred HHHHHHHHHhccCCCEEEECcHH--------HHHhhhhcCcEEEeCCccccCcccHHHHHHHHHcC
Confidence 223322111 1456777766432 1122222 23344444433 59999999999754
No 31
>2ejc_A Pantoate--beta-alanine ligase; X-RAY diffraction, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Thermotoga maritima}
Probab=99.31 E-value=1.6e-13 Score=127.52 Aligned_cols=135 Identities=17% Similarity=0.164 Sum_probs=87.5
Q ss_pred HhhcCCCCeEEEEeCcCCcCCHHHHHHHHHHHHhcCeEEEEEeCChh--hhhcCC-CCCCCHHHHHHHHHhcCCccEEEE
Q 022469 44 WTRKKKKPVRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAE--IIANKG-PPVTPLHERMIMVNAVKWVDEVIS 120 (296)
Q Consensus 44 ~~~~~~~~~rV~~~G~FD~vH~GH~~lL~qAk~lgd~LiVgV~sD~~--i~~~Kg-~pi~s~eER~~~l~~~k~VD~Vv~ 120 (296)
.++...+. |.+.|+||++|.||+.+|++|++.++.++|++..+|. ....+. +.+.+.++|.++++++ +||.++.
T Consensus 16 ~~r~~g~~--V~~vgtfdgLH~GH~sLI~~A~~~ad~vVVSffvnP~qf~~~ed~~~yp~tle~d~~lL~~~-GVD~vf~ 92 (280)
T 2ejc_A 16 EMREKKKT--IGFVPTMGYLHEGHLSLVRRARAENDVVVVSIFVNPTQFGPNEDYERYPRDFERDRKLLEKE-NVDCIFH 92 (280)
T ss_dssp HHHHTTCC--EEEEEECSCCCHHHHHHHHHHHHHSSEEEEEECCCGGGCCTTSCGGGSCCCHHHHHHHHHTT-TCSEEEC
T ss_pred HHHhcCCE--EEEEcCCccccHHHHHHHHHHHHhCCEEEEEEeCChHHhcCCcccccCCCCHHHHHHHHHHC-CCCEEEe
Confidence 45555443 5555999999999999999999999999999966653 221111 3467899999999999 6999986
Q ss_pred cCCCC--ccHHHH--------HH-HHHhcCccE------------EEEc-CCCCcCCCCCchHHHHHHCC-----eEE--
Q 022469 121 DAPYA--ITKDFM--------KK-LFDEYNIDY------------IIHG-DDPCVLPDGTDAYELAKKAG-----RYK-- 169 (296)
Q Consensus 121 ~~py~--~t~efl--------~~-ll~~~~~d~------------VV~G-dD~~fg~~g~d~y~~lk~~g-----~v~-- 169 (296)
.++. .+.+|. .. +...++|.+ .++| +|++||.+..+....+++.+ .+.
T Consensus 93 -p~~~~m~p~~f~~~v~~~~~~~~l~G~~rp~hF~Gv~tvv~kLf~iv~p~~~~FG~kd~qq~~~l~~~~~dl~~~v~iv 171 (280)
T 2ejc_A 93 -PSVEEMYPPDFSTYVEETKLSKHLCGRSRPGHFRGVCTVVTKLFNIVKPHRAYFGQKDAQQFRVLRRMVRDLNMDVEMI 171 (280)
T ss_dssp -CCHHHHSCTTCCCCCCCCSGGGTTTGGGSTTHHHHHHHHHHHHHHHHCCSEEEEEGGGHHHHHHHHHHHHHTTCCCEEE
T ss_pred -CCHHHCCCcCceEEEEcCCcceEEecCCCCCeecceEEEEeeeceeccCceEEeCCCCCcCHHHHHHHHHHcCCeEEEE
Confidence 3321 112222 11 112233333 3444 48999988777777777643 233
Q ss_pred EcCCC-----CCCCHHHH
Q 022469 170 QIKRT-----EGVSSTDI 182 (296)
Q Consensus 170 ~v~rt-----~~VSST~I 182 (296)
.+|.. ..+|||.+
T Consensus 172 ~vp~vr~~dGlaiSSrn~ 189 (280)
T 2ejc_A 172 ECPIVREPDGLAMSSRNV 189 (280)
T ss_dssp EECCCBCTTSCBCCGGGG
T ss_pred eeCcEEcCCCCEeccCcc
Confidence 34542 24899875
No 32
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A*
Probab=99.31 E-value=8.2e-12 Score=115.74 Aligned_cols=87 Identities=18% Similarity=0.207 Sum_probs=59.9
Q ss_pred CCCeEEEEeCcCCcCCHHHHHHHHHHHHhcC--e---EEEEE-eCChhhhhcCCCCCCCHHHHHHHHHh-cCCccEEEEc
Q 022469 49 KKPVRVYMDGCFDMMHYGHCNALRQARALGD--Q---LVVGV-VSDAEIIANKGPPVTPLHERMIMVNA-VKWVDEVISD 121 (296)
Q Consensus 49 ~~~~rV~~~G~FD~vH~GH~~lL~qAk~lgd--~---LiVgV-~sD~~i~~~Kg~pi~s~eER~~~l~~-~k~VD~Vv~~ 121 (296)
+.++.+++.|+|||+|.||+.++++|++.++ . ++|++ .+.+. ...| .++++.++|++|++. +...+.+.+
T Consensus 6 ~~~~i~i~gGsFDPiH~GHl~l~~~a~~~~~~d~~~~vvv~~f~P~~~-~~~K-~~l~s~~~R~~ml~~ai~~~~~~~v- 82 (279)
T 1kqn_A 6 KTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGD-AYKK-KGLIPAYHRVIMAELATKNSKWVEV- 82 (279)
T ss_dssp CEEEEEEEEECCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEEEEECCG-GGCC-TTCCCHHHHHHHHHHHTTTCSSEEE-
T ss_pred CCceEEEEEeeecHhhHHHHHHHHHHHHHhcccCCceEEEEEEcCCCC-Cccc-cCCCCHHHHHHHHHHHhcCCCcEEE-
Confidence 3355789999999999999999999998863 2 44432 22211 1234 468999999999986 567777766
Q ss_pred CCC-------CccHHHHHHHHHhc
Q 022469 122 APY-------AITKDFMKKLFDEY 138 (296)
Q Consensus 122 ~py-------~~t~efl~~ll~~~ 138 (296)
.+| ..|.+.++.+.+++
T Consensus 83 ~~~E~~~~~~syTidtL~~l~~~~ 106 (279)
T 1kqn_A 83 DTWESLQKEWKETLKVLRHHQEKL 106 (279)
T ss_dssp CCTGGGCSSCCCHHHHHHHHHHHH
T ss_pred eccccccCCCCcHHHHHHHHHHHH
Confidence 444 34566666655555
No 33
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus}
Probab=99.26 E-value=3.9e-12 Score=115.34 Aligned_cols=54 Identities=33% Similarity=0.565 Sum_probs=48.0
Q ss_pred CCCCCCCeEEEEeCcccccCHHHHHHHHHHHhC--CCEEEEEEeCchhhhhcCCCC
Q 022469 243 KGPGPDARIIYIDGAFDLFHAGHVEILRIARGL--GDFLLVGIHNDQTVRLKNPSC 296 (296)
Q Consensus 243 ~~~~~~~~~v~~~G~FDl~H~GHi~~L~~a~~~--g~~livgv~~d~~~~~~k~~~ 296 (296)
..|.+..++||++|+||+||.||+++|++|+++ ||+|||||++|+.++++||+|
T Consensus 70 ~~~~~~~~~V~~~GtFD~~H~GHl~iL~rAk~lf~gD~LIVgV~~D~~v~~~Kg~p 125 (236)
T 3hl4_A 70 GTPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFT 125 (236)
T ss_dssp CCCTTSCEEEEEEECCTTCCHHHHHHHHHHHTSSSSEEEEEEECCHHHHHHHTCCC
T ss_pred CCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHhcCCCeEEEEEcccHHHhhcCCCC
Confidence 345566789999999999999999999999999 689999999999998888754
No 34
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A*
Probab=99.26 E-value=1.9e-11 Score=111.36 Aligned_cols=88 Identities=18% Similarity=0.176 Sum_probs=58.3
Q ss_pred CeEEEEeCcCCcCCHHHHHHHHHHHHhcCe----EEEEEeCChhhhhcCCCCCCCHHHHHHHHHh-cCCccEEEEc----
Q 022469 51 PVRVYMDGCFDMMHYGHCNALRQARALGDQ----LVVGVVSDAEIIANKGPPVTPLHERMIMVNA-VKWVDEVISD---- 121 (296)
Q Consensus 51 ~~rV~~~G~FD~vH~GH~~lL~qAk~lgd~----LiVgV~sD~~i~~~Kg~pi~s~eER~~~l~~-~k~VD~Vv~~---- 121 (296)
++++++.|+|||+|.||+.++++|++.++. .+|++...+.....+.+++++.++|++|++. +...+.+.++
T Consensus 6 ~~i~i~~GsFdPiH~GHl~l~~~a~~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~m~~~ai~~~~~~~v~~~E~ 85 (252)
T 1nup_A 6 PVVLLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDTYGKKDLAASHHRVAMARLALQTSDWIRVDPWES 85 (252)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHHHTTSEEEEEEEEEECCTTCSSSCCCCHHHHHHHHHHHGGGCSSEEECCHHH
T ss_pred ceEEEEEecCcHhhHHHHHHHHHHHHHhcccCCceEEEEEEeCCCCcccCCCCCCHHHHHHHHHHHhcCCCceEeehHHh
Confidence 457899999999999999999999998743 5554443332111122468999999999985 5444444331
Q ss_pred --CCCCccHHHHHHHHHhc
Q 022469 122 --APYAITKDFMKKLFDEY 138 (296)
Q Consensus 122 --~py~~t~efl~~ll~~~ 138 (296)
..+..|.+.++.+.+++
T Consensus 86 ~~~~~syTidtL~~l~~~~ 104 (252)
T 1nup_A 86 EQAQWMETVKVLRHHHSKL 104 (252)
T ss_dssp HSSSCCCHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHH
Confidence 22344666766654555
No 35
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=99.19 E-value=1.3e-10 Score=110.09 Aligned_cols=127 Identities=20% Similarity=0.197 Sum_probs=82.1
Q ss_pred EEEEeCcCCcCCHHHHHHHHHHHHhcCeEEEEEeCChhh-----hhcCCCCCCCHHHHHHHHHh-cCCccE-EEE----c
Q 022469 53 RVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEI-----IANKGPPVTPLHERMIMVNA-VKWVDE-VIS----D 121 (296)
Q Consensus 53 rV~~~G~FD~vH~GH~~lL~qAk~lgd~LiVgV~sD~~i-----~~~Kg~pi~s~eER~~~l~~-~k~VD~-Vv~----~ 121 (296)
++++.|+|||+|.||+.++++|++.+|+|+|++.+++.. ...+.+..++.+||++|++. ++..+. +.+ +
T Consensus 4 ~~i~~GtFdP~h~GHl~~~~~a~~~~d~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~R~~m~~~~~~~~~~~~~v~~~~~ 83 (365)
T 1lw7_A 4 VGVIFGKFYPVHTGHINMIYEAFSKVDELHVIVCSDTVRDLKLFYDSKMKRMPTVQDRLRWMQQIFKYQKNQIFIHHLVE 83 (365)
T ss_dssp EEEEEECCSSCCHHHHHHHHHHHTTCSEEEEEEEECHHHHHHHHHHTTCSSCCCHHHHHHHHHHHTSTTTTTEEEEEEEC
T ss_pred EEEEEEeeCCCCHHHHHHHHHHHHHCCEEEEEECCCCccccccccccccCCCCCHHHHHHHHHHHhhcCCCcEEEEEecc
Confidence 589999999999999999999999999999999998742 11111234999999999985 555443 321 1
Q ss_pred --CCC-C-cc---HHHHHHHHH--hcCccEEEEcCCCCcCCCCCchHHHHHHC-CeEEEcC--C-CCCCCHHHHHHHH
Q 022469 122 --APY-A-IT---KDFMKKLFD--EYNIDYIIHGDDPCVLPDGTDAYELAKKA-GRYKQIK--R-TEGVSSTDIVGRM 186 (296)
Q Consensus 122 --~py-~-~t---~efl~~ll~--~~~~d~VV~GdD~~fg~~g~d~y~~lk~~-g~v~~v~--r-t~~VSST~Ir~rI 186 (296)
.|+ . .. .+.+..++. .++++.++.++++. .-...+.. .++..++ + ...||||.||+..
T Consensus 84 ~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~~~~~e~~~-------~~~~~~~~~~e~v~l~~~~~~~~iSsT~IRe~~ 154 (365)
T 1lw7_A 84 DGIPSYPNGWQSWSEAVKTLFHEKHFEPSIVFSSEPQD-------KAPYEKYLGLEVSLVDPDRTFFNVSATKIRTTP 154 (365)
T ss_dssp SSSCCTTSCHHHHHHHHHHHHHHTTCCCSEEECSCGGG-------HHHHHHHTCCEEECCCSSCCSSCCCHHHHHHCG
T ss_pred CCCCCCchHHHHHHHHHHHHhhccCCCCcEEEECCCCC-------HHHHHHHcCCceEEeCCcccCCCCCHHHHHhCh
Confidence 121 0 00 122333444 36788777554432 11233333 3555555 3 3579999999965
No 36
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.10 E-value=6.1e-10 Score=104.07 Aligned_cols=129 Identities=16% Similarity=0.166 Sum_probs=80.0
Q ss_pred eEEEEeCcCCcCCHHHHHHHHHHHHhcCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHh-cCCc----cEE--EEcCCC
Q 022469 52 VRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNA-VKWV----DEV--ISDAPY 124 (296)
Q Consensus 52 ~rV~~~G~FD~vH~GH~~lL~qAk~lgd~LiVgV~sD~~i~~~Kg~pi~s~eER~~~l~~-~k~V----D~V--v~~~py 124 (296)
.++++.|+|||+|.||+.++++|.+.+|+++|+|.+++.. .+..+.++.+||++|++. ++.. +.+ +....+
T Consensus 8 ~~~i~~GtFdP~h~GHl~~~~~a~~~~d~~~~~v~~~~~~--~~~~~~~~~~~R~~m~~~~~~~~~~~~~~~~~~~~~d~ 85 (352)
T 2qjt_B 8 DISVFIGRFQPFHKGHLHNIIIALQNSKKVIINIGSCFNT--PNIKNPFSFEQRKQMIESDLQVAGIDLDTVVIEPLADY 85 (352)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHSEEEEEEEEEEESCC--CCSSSCSCHHHHHHHHHHHHHHTTCCGGGEEEEEEECC
T ss_pred cEEEEEEecCCCChHHHHHHHHHHHhCCcEEEEECCCCCC--cccCCCCCHHHHHHHHHHHhccccCccceEEEEEcCCC
Confidence 4689999999999999999999999999999999886422 122456899999999986 3111 222 221111
Q ss_pred --C--ccHHHHHHHHHh---cCccEEEEcCCCCcCCCCCchHHHHHHC--CeEEEcCCCCCCCHHHHHHHHhh
Q 022469 125 --A--ITKDFMKKLFDE---YNIDYIIHGDDPCVLPDGTDAYELAKKA--GRYKQIKRTEGVSSTDIVGRMLL 188 (296)
Q Consensus 125 --~--~t~efl~~ll~~---~~~d~VV~GdD~~fg~~g~d~y~~lk~~--g~v~~v~rt~~VSST~Ir~rIl~ 188 (296)
. ...+++.+.+.+ +.++.+++|..- +...+ .+... -....++....||||.||+++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~-----~~~~~-~~~~~~~~~~~~~~~~~~iSST~IR~~~~~ 152 (352)
T 2qjt_B 86 FYQEQKWQDELRKNVYKHAKNNNSIAIVGHIK-----DSSSY-YIRSFPEWDYIGVDNYKNFNATEFRQKFYN 152 (352)
T ss_dssp TTCHHHHHHHHHHHHTTTSCSSCCEEECCBSS-----SSHHH-HHHHCTTSEECCBCCTTCCCHHHHHHHHHT
T ss_pred cCChHHHHHHHHHHHHHhcccCCeEEEEcCCC-----Ccchh-hhhcCCccceeccCCCCCCCchHHHHHHhc
Confidence 1 112333332211 235677777431 12233 22222 22333444567999999999985
No 37
>1v8f_A Pantoate-beta-alanine ligase; rossmann fold, dimer, structural genomics, riken STR genomics/proteomics initiative, RSGI; HET: P6G; 1.90A {Thermus thermophilus} SCOP: c.26.1.4 PDB: 1ufv_A
Probab=98.92 E-value=5.4e-11 Score=110.22 Aligned_cols=127 Identities=14% Similarity=0.119 Sum_probs=87.2
Q ss_pred eEEEEeCcCCcCCHHHHHHHHHHHHhcCeEEEEEeCChhh-hhcCC--CCCCCHHHHHHHHHhcCCccEEEEcCCCC--c
Q 022469 52 VRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEI-IANKG--PPVTPLHERMIMVNAVKWVDEVISDAPYA--I 126 (296)
Q Consensus 52 ~rV~~~G~FD~vH~GH~~lL~qAk~lgd~LiVgV~sD~~i-~~~Kg--~pi~s~eER~~~l~~~k~VD~Vv~~~py~--~ 126 (296)
..|.+.|+ +|.||+.+|++|++.++.++|.+..+|.- ..... +.+.+.++|.++++++ +||.++. .+|+ .
T Consensus 20 ~~VpTmG~---lH~GH~~Li~~A~~~a~~vVvsff~nP~qf~~~ed~~~yp~tle~d~~ll~~~-GvD~vf~-p~f~~m~ 94 (276)
T 1v8f_A 20 GFVPTMGY---LHRGHLALVERARRENPFVVVSVFVNPLQFGPGEDYHRYPRDLERDRALLQEA-GVDLLFA-PGVEEMY 94 (276)
T ss_dssp EEEEECSS---CCHHHHHHHHHHHHHCSEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHT-TCSEEEC-CCHHHHS
T ss_pred eEEEeCCC---ccHHHHHHHHHHHHhCCEEEEEEECCHHHhCCCcccCCCCcCHHHHHHHHHhC-CCCEEEe-CChHhCC
Confidence 45789999 99999999999999999889898888742 22121 4689999999999998 7999986 4432 1
Q ss_pred cHHHHHHHHHhcCccEEEEcC----------------------C-CCcCCCCCchHHHHHHCC-----eEEEc--CCC--
Q 022469 127 TKDFMKKLFDEYNIDYIIHGD----------------------D-PCVLPDGTDAYELAKKAG-----RYKQI--KRT-- 174 (296)
Q Consensus 127 t~efl~~ll~~~~~d~VV~Gd----------------------D-~~fg~~g~d~y~~lk~~g-----~v~~v--~rt-- 174 (296)
+.+|+..+....+++.+++|. | ++||.+..+....+++.+ .+.++ +..
T Consensus 95 p~~f~~~v~~~~~~~~vl~G~~RpghF~GV~TVv~kLf~iv~Pd~~~FG~kd~qq~~~l~~~~~dl~~~v~iv~~p~vr~ 174 (276)
T 1v8f_A 95 PEGFATRVQVEGPLTALWEGAVRPGHFQGVATVVARLFLLVQPQRAYFGEKDYQQLLVVRRMVRDLGFPVEVVGVPTVRE 174 (276)
T ss_dssp CTTCCEEEEECSHHHHSTHHHHSTTHHHHHHHHHHHHHHHHCCSEEEEEGGGHHHHHHHHHHHHHHTCCCEEEEECCCBC
T ss_pred CcCCeEEEEecCCcceEEecCCCCCeecceeehhhHhhcccCCCEEEECCCCCcCHHHHHHHHHHcCCeEEEEecCcEEc
Confidence 223321110013345556666 8 899987777777777643 33443 442
Q ss_pred ---CCCCHHHHH
Q 022469 175 ---EGVSSTDIV 183 (296)
Q Consensus 175 ---~~VSST~Ir 183 (296)
..+|||.|+
T Consensus 175 ~dGlaiSSrnir 186 (276)
T 1v8f_A 175 EDGLALSSRNVY 186 (276)
T ss_dssp TTSCBCCGGGGG
T ss_pred CCCCEeEEeEEE
Confidence 348999985
No 38
>3ag6_A Pantothenate synthetase; ATP-dependent enzyme, ATP-binding, nucleotide-binding, pantothenate biosynthesis; HET: PAJ PG4; 1.85A {Staphylococcus aureus} PDB: 3ag5_A* 2x3f_A*
Probab=98.88 E-value=5.1e-10 Score=104.00 Aligned_cols=134 Identities=14% Similarity=0.160 Sum_probs=91.5
Q ss_pred HhhcCCCCe-EEEEeCcCCcCCHHHHHHHHHHHHhcCeEEEEEeCChh-hhhcCC--CCCCCHHHHHHHHHhcCCccEEE
Q 022469 44 WTRKKKKPV-RVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAE-IIANKG--PPVTPLHERMIMVNAVKWVDEVI 119 (296)
Q Consensus 44 ~~~~~~~~~-rV~~~G~FD~vH~GH~~lL~qAk~lgd~LiVgV~sD~~-i~~~Kg--~pi~s~eER~~~l~~~k~VD~Vv 119 (296)
.++...+.+ -|.+.|+ +|.||+.+|++|++.++.++|.+..+|. +..... ..+.+.+++.++++++ +||.++
T Consensus 17 ~~r~~g~~I~fVpTmG~---lH~GH~~LI~~a~~~a~~vVvsffvnP~qf~~~ed~~~yprtle~d~~ll~~~-GvD~vf 92 (283)
T 3ag6_A 17 AAKRSGTTIGFIPTMGA---LHDGHLTMVRESVSTNDITIVSVFVNPLQFGPNEDFDAYPRQIDKDLELVSEV-GADIVF 92 (283)
T ss_dssp HHHHTTCCEEEEEECSS---CCHHHHHHHHHHHTTSSEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHH-TCSEEE
T ss_pred HHHhcCCcEEEEECCcc---ccHHHHHHHHHHHHhCCEEEEEEeCChhhcCCccccccCCCCHHHHHHHHHhC-CCCEEE
Confidence 455544433 2448997 9999999999999999988888877763 221111 3588999999999998 799998
Q ss_pred EcCCCC--ccHHH--------HHH-HHHhcCcc-------------EEEEcCCCCcCCCCCchHHHHHHCC-----eEEE
Q 022469 120 SDAPYA--ITKDF--------MKK-LFDEYNID-------------YIIHGDDPCVLPDGTDAYELAKKAG-----RYKQ 170 (296)
Q Consensus 120 ~~~py~--~t~ef--------l~~-ll~~~~~d-------------~VV~GdD~~fg~~g~d~y~~lk~~g-----~v~~ 170 (296)
. .+|. .+.+| +.+ |...++|. .+|.|+|++||.+..+....+++.+ .+.+
T Consensus 93 ~-p~~~~myp~~f~~~v~~~~l~~~L~G~~rp~hF~GV~TVV~KLf~iV~p~~~~FG~Kd~qql~~l~~m~~dl~~~V~i 171 (283)
T 3ag6_A 93 H-PAVEDMYPGELGIDVKVGPLADVLEGAKRPGHFDGVVTVVNKLFNIVMPDYAYFGKKDAQQLAIVEQMVKDFNHAVEI 171 (283)
T ss_dssp C-CCHHHHSCSSCSEEEEECGGGSSTHHHHSTTHHHHHHHHHHHHHHHHCCSEEEEEGGGHHHHHHHHHHHHHTTCCCEE
T ss_pred e-CCHHHCCCCCceEEEeccccchhhccCCCCCeecchhhHhhhhcEEecCceEEECCCCccCHHHHHHHHHHcCCeEEE
Confidence 6 3331 11223 211 22337888 8999999999988777777776642 3333
Q ss_pred --cCCC-----CCCCHHHH
Q 022469 171 --IKRT-----EGVSSTDI 182 (296)
Q Consensus 171 --v~rt-----~~VSST~I 182 (296)
+|.. ..+|||.+
T Consensus 172 v~vp~vr~~dGlaiSSrn~ 190 (283)
T 3ag6_A 172 IGIDIVREADGLAKSSRNV 190 (283)
T ss_dssp EEECCCBCTTSCBCCGGGG
T ss_pred EecCcEEeCCCCEecCCcc
Confidence 4442 24899875
No 39
>3glv_A Lipopolysaccharide core biosynthesis protein; structural GEN PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1}
Probab=98.65 E-value=2.7e-08 Score=82.84 Aligned_cols=43 Identities=35% Similarity=0.588 Sum_probs=40.0
Q ss_pred CeEEEEeCcccccCHHHHHHHHHHHhCCCEEEEEEeCchhhhh
Q 022469 249 ARIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQTVRL 291 (296)
Q Consensus 249 ~~~v~~~G~FDl~H~GHi~~L~~a~~~g~~livgv~~d~~~~~ 291 (296)
++++++.|+||.+|.||+.+|++|++.++.++|+++.|....+
T Consensus 2 m~~v~~~G~FD~vH~GH~~li~~a~~~~~~~~v~v~~~~~~~~ 44 (143)
T 3glv_A 2 MIRVMATGVFDILHLGHIHYLKESKKLGDELVVVVARDSTARN 44 (143)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTSSEEEEEECCHHHHHH
T ss_pred ceEEEEEeecCCCCHHHHHHHHHHHHhCCCcEEEEECCcchhh
Confidence 5789999999999999999999999999999999999987654
No 40
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5
Probab=98.56 E-value=6.7e-07 Score=86.66 Aligned_cols=146 Identities=14% Similarity=0.071 Sum_probs=91.5
Q ss_pred hHHHHHhhcCCCCeEEEEeCcCCcCCHHHHHHHHHHHHhc--CeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHhc-CCc
Q 022469 39 DRWLQWTRKKKKPVRVYMDGCFDMMHYGHCNALRQARALG--DQLVVGVVSDAEIIANKGPPVTPLHERMIMVNAV-KWV 115 (296)
Q Consensus 39 ~~~~~~~~~~~~~~rV~~~G~FD~vH~GH~~lL~qAk~lg--d~LiVgV~sD~~i~~~Kg~pi~s~eER~~~l~~~-k~V 115 (296)
.++++.++...-. +|++.|+||++|.||..++++|.+.. |.|++...-.+ .| +-..+.+.|+++++.+ ...
T Consensus 181 ~e~R~~f~~~gw~-~VvafqTrNPiHrgH~~l~~~Ale~~~~D~vll~P~~g~----~K-~~di~~~~R~~~~~~~~~~~ 254 (396)
T 1jhd_A 181 VEIRNEIKEHGWS-KVVAFQTRNPMHRAHEELCRMAMESLDADGVVVHMLLGK----LK-KGDIPAPVRDAAIRTMAEVY 254 (396)
T ss_dssp HHHHHHHHHHTCS-SEEEEEESSCCCHHHHHHHHHHHHHHTCSEEEEEEEECC----CC-TTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCc-eEEEeccCCCCchHHHHHHHHHHHHcCCCeEEEEECCCC----CC-CCCCCHHHHHHHHHHHHHhc
Confidence 4666666555444 47889999999999999999999987 66654433222 23 3457889999998873 221
Q ss_pred ---cEEE-EcCCCCc-----cHHHHHHHH-HhcCccEEEEcCCCC---cCCCCCchHHHHHHC-------CeEEEcCC--
Q 022469 116 ---DEVI-SDAPYAI-----TKDFMKKLF-DEYNIDYIIHGDDPC---VLPDGTDAYELAKKA-------GRYKQIKR-- 173 (296)
Q Consensus 116 ---D~Vv-~~~py~~-----t~efl~~ll-~~~~~d~VV~GdD~~---fg~~g~d~y~~lk~~-------g~v~~v~r-- 173 (296)
+.++ ...|+.. ++..+..++ +.++|.++++|.|.. ...++.+..++++.. .++..+++
T Consensus 255 ~p~~~v~l~~~p~~m~~aGPreailhaiirkn~G~t~fIVGrDhag~~~~y~~~~aq~il~~~~~~~~l~i~iv~~~~~~ 334 (396)
T 1jhd_A 255 FPPNTVMVTGYGFDMLYAGPREAVLHAYFRQNMGATHFIIGRDHAGVGDYYGAFDAQTIFDDEVPEGAMEIEIFRADHTA 334 (396)
T ss_dssp SCTTCEEEEEEECCCCCCTHHHHHHHHHHHHHTTCSEEEECTTTTCCTTCSCTTHHHHHHHHTSCTTSCSCEEEECCCEE
T ss_pred CCCcceEEEechHHhhcCCchHHHHHHHHHHcCCCcEEEECCCCCCccccCCcchHHHHHHhcccccccceeEEecccce
Confidence 2221 1123221 233344433 458999999999984 234555555566642 23333332
Q ss_pred ---------------------CCCCCHHHHHHHHhhch
Q 022469 174 ---------------------TEGVSSTDIVGRMLLCV 190 (296)
Q Consensus 174 ---------------------t~~VSST~Ir~rIl~~~ 190 (296)
...||+|+||+++..+.
T Consensus 335 Y~~~~~~~~~~~~~p~~~~~~~~~ISgT~IR~~L~~G~ 372 (396)
T 1jhd_A 335 YSKKLNKIVMMRDVPDHTKEDFVLLSGTKVREMLGQGI 372 (396)
T ss_dssp EETTTTEEEEGGGCTTCCGGGEECCCHHHHHHHHHTTC
T ss_pred ecCCCCeEEEccccCcccCCCccccCHHHHHHHHHCCC
Confidence 02489999999987663
No 41
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus}
Probab=98.52 E-value=1.2e-07 Score=77.30 Aligned_cols=40 Identities=40% Similarity=0.798 Sum_probs=37.4
Q ss_pred eEEEEeCcccccCHHHHHHHHHHHhCCCEEEEEEeCchhh
Q 022469 250 RIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQTV 289 (296)
Q Consensus 250 ~~v~~~G~FDl~H~GHi~~L~~a~~~g~~livgv~~d~~~ 289 (296)
+++++.|+||.+|.||+.++++|++.++.++|+++.|+..
T Consensus 2 ~~~~~~G~FDp~H~GH~~li~~a~~~~~~~~v~v~~~~~~ 41 (132)
T 2b7l_A 2 KRVITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDEFN 41 (132)
T ss_dssp CEEEEEECCCSCCHHHHHHHHHHHHTSSEEEEEEECHHHH
T ss_pred eEEEEeeecCcCCHHHHHHHHHHHHhCCcEEEEEECCHHH
Confidence 6799999999999999999999999999999999999743
No 42
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5
Probab=98.51 E-value=1.4e-06 Score=83.14 Aligned_cols=146 Identities=14% Similarity=0.123 Sum_probs=91.7
Q ss_pred hHHHHHhhcCCCCeEEEEeCcCCcCCHHHHHHHHHHHHhcCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHhc-CCc--
Q 022469 39 DRWLQWTRKKKKPVRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNAV-KWV-- 115 (296)
Q Consensus 39 ~~~~~~~~~~~~~~rV~~~G~FD~vH~GH~~lL~qAk~lgd~LiVgV~sD~~i~~~Kg~pi~s~eER~~~l~~~-k~V-- 115 (296)
.++++.++...-. +|++.|+||++|.||..+.++|.+..|.+++-..-.+ .| +-..+.+.|+++++.+ ...
T Consensus 144 ~e~r~~f~~~gw~-~VvafqTrNPiHrgH~~l~~~ale~~d~vll~P~~g~----~K-~~d~~~~~R~~~~~~~i~~~~p 217 (349)
T 1v47_A 144 EEVRAFFRQRGWR-KVVAFQTRNAPHRAHEYLIRLGLELADGVLVHPILGA----KK-PDDFPTEVIVEAYQALIRDFLP 217 (349)
T ss_dssp HHHHHHHHHTTCC-SEEEEEESSCCCHHHHHHHHHHHHHSSEEEEEEBCSC----CC-TTSCCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHhcCCC-eEEEeecCCCCchHHHHHHHHHHHhCCcEEEEECCCC----CC-CCCCCHHHHHHHHHHHHhhcCC
Confidence 5677776655544 4777999999999999999999999887765444322 23 3458899999998873 221
Q ss_pred -cEEEE-cCCCCc-----cHHHHHHHH-HhcCccEEEEcCCCC---cCCCCCchHHHHHHC----CeEEEcCC-------
Q 022469 116 -DEVIS-DAPYAI-----TKDFMKKLF-DEYNIDYIIHGDDPC---VLPDGTDAYELAKKA----GRYKQIKR------- 173 (296)
Q Consensus 116 -D~Vv~-~~py~~-----t~efl~~ll-~~~~~d~VV~GdD~~---fg~~g~d~y~~lk~~----g~v~~v~r------- 173 (296)
+.++. ..|+.. ++..+..++ +.++|.+.++|.|.. -..++.+..++++.. -++..+++
T Consensus 218 ~~~~~l~~~p~~m~~aGPreailhaiirkn~G~t~fIVGrDhag~~~~y~~~~aq~i~~~~~~l~i~~v~~~~~~Y~~~~ 297 (349)
T 1v47_A 218 QERVAFFGLATPMRYAGPKEAVFHALVRKNFGATHFLVGRDHAGVGDFYDPYAAHRIFDRLPPLGIEIVKVGAVFHCPLC 297 (349)
T ss_dssp GGGEEECCBCSCCCCCTHHHHHHHHHHHHHTTCSEEEECTTTTCSTTCSCTTHHHHGGGGSCCCSSEEEECCCEEEETTT
T ss_pred CcceEEEechHHhhcCCcHHHHHHHHHHHcCCCcEEEECcCCCCcccccCcccHHHHHHhhhhcCceEEeccccEEcccC
Confidence 22322 233332 233355544 458999999999974 123344443444443 12222211
Q ss_pred ----------------CCCCCHHHHHHHHhhch
Q 022469 174 ----------------TEGVSSTDIVGRMLLCV 190 (296)
Q Consensus 174 ----------------t~~VSST~Ir~rIl~~~ 190 (296)
...||+|+||+++..+.
T Consensus 298 ~~~~~~~~~p~~~~~~~~~ISgT~iR~~L~~G~ 330 (349)
T 1v47_A 298 GGIASERTCPEGHREKRTAISMTKVRALLREGK 330 (349)
T ss_dssp TEEEETTTSCGGGGGGCEECCHHHHHHHHHTTC
T ss_pred CceEEccccCccCCCcccccCHHHHHHHHHCcC
Confidence 02489999999987653
No 43
>1coz_A Protein (glycerol-3-phosphate cytidylyltransferase); HET: CTP; 2.00A {Bacillus subtilis} SCOP: c.26.1.2 PDB: 1n1d_A*
Probab=98.50 E-value=1.3e-07 Score=76.51 Aligned_cols=38 Identities=42% Similarity=0.820 Sum_probs=36.5
Q ss_pred eEEEEeCcccccCHHHHHHHHHHHhCCCEEEEEEeCch
Q 022469 250 RIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQ 287 (296)
Q Consensus 250 ~~v~~~G~FDl~H~GHi~~L~~a~~~g~~livgv~~d~ 287 (296)
+++++.|+||.+|.||+.++++|++.+|.++|+++.|+
T Consensus 2 ~~~~~~G~FDp~H~GH~~li~~a~~~~d~~~v~v~~~~ 39 (129)
T 1coz_A 2 KKVITYGTFDLLHWGHIKLLERAKQLGDYLVVAISTDE 39 (129)
T ss_dssp CEEEEEECCCSCCHHHHHHHHHHHTTSSEEEEEEECHH
T ss_pred cEEEEEEeCCCCCHHHHHHHHHHHHhCCCeEEEEECCH
Confidence 67899999999999999999999999999999999997
No 44
>3cov_A Pantothenate synthetase; pantothenate biosynthesis, enzym ligase, drug design, ATP-binding, magnesium, metal-binding; 1.50A {Mycobacterium tuberculosis} SCOP: c.26.1.4 PDB: 3cow_A* 3coy_A* 3coz_A* 3imc_A* 3ime_A* 3img_A* 3iob_A* 3ioc_A* 3iod_A* 3ioe_A* 3iub_A* 3iue_A* 3ivc_A* 3ivg_A* 3ivx_A* 2a84_A* 1n2b_A* 1n2e_A* 1n2g_A* 1n2h_A* ...
Probab=98.43 E-value=1.4e-08 Score=95.08 Aligned_cols=109 Identities=14% Similarity=0.149 Sum_probs=73.4
Q ss_pred EEEeCcCCcCCHHHHHHHHHHHH-hcCeEEEEEeCChhhhhcCC---CCCCCHHHHHHHHHhcCCccEEEEcCCCC--cc
Q 022469 54 VYMDGCFDMMHYGHCNALRQARA-LGDQLVVGVVSDAEIIANKG---PPVTPLHERMIMVNAVKWVDEVISDAPYA--IT 127 (296)
Q Consensus 54 V~~~G~FD~vH~GH~~lL~qAk~-lgd~LiVgV~sD~~i~~~Kg---~pi~s~eER~~~l~~~k~VD~Vv~~~py~--~t 127 (296)
|.+..++..+|.||+.+|++|++ .++.++|.+..+|.-...+. ..+.+.+++.++++++ +||.++. .+|. .+
T Consensus 35 vg~VpTmG~LH~GH~sLI~~A~~~~a~~vVvSffvnP~qF~~~ed~~~yprtle~d~~lL~~~-GVD~vf~-p~~~~myP 112 (301)
T 3cov_A 35 VMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQFGAGGDLDAYPRTPDDDLAQLRAE-GVEIAFT-PTTAAMYP 112 (301)
T ss_dssp EEEEEECSCCCHHHHHHHHHHHTSTTEEEEEEECCCGGGCCSSSHHHHSCCCHHHHHHHHHHT-TCCEEEC-CCHHHHCT
T ss_pred EEEEecCCcccHHHHHHHHHHHHhcCCEEEEEEcCChhhcCCccccccCCCCHHHHHHHHHhC-CCCEEEe-CCHHHCCC
Confidence 34444555599999999999999 89888888877763211111 3588999999999998 7999986 3322 11
Q ss_pred HHHHHHHHHhcCccEEEEcC-----------------------CCCcCCCCCchHHHHHHC
Q 022469 128 KDFMKKLFDEYNIDYIIHGD-----------------------DPCVLPDGTDAYELAKKA 165 (296)
Q Consensus 128 ~efl~~ll~~~~~d~VV~Gd-----------------------D~~fg~~g~d~y~~lk~~ 165 (296)
.+|+..+.- -++..+++|. |++||.+.......+++.
T Consensus 113 ~~f~~~v~~-~~~~~vl~G~~RPghF~GV~TVV~KLfniv~P~~a~FG~Kd~qql~~lr~m 172 (301)
T 3cov_A 113 DGLRTTVQP-GPLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDRVFFGEKDYQQLVLIRQL 172 (301)
T ss_dssp TCSCSEEEC-CGGGGSGGGSSCTTHHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHH
T ss_pred CCceEEEec-CCcceeeecCCCCChhhhhhHHHHHHhhccCCCeEEECCCcccCHHHHHHH
Confidence 223211100 1345566777 899998877777777764
No 45
>1vlh_A Phosphopantetheine adenylyltransferase; TM0741, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: PNS; 2.20A {Thermotoga maritima} SCOP: c.26.1.3
Probab=98.24 E-value=9.3e-07 Score=75.89 Aligned_cols=39 Identities=28% Similarity=0.377 Sum_probs=36.1
Q ss_pred CeEEEEeCcccccCHHHHHHHHHHHhCCCEEEEEEeCch
Q 022469 249 ARIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQ 287 (296)
Q Consensus 249 ~~~v~~~G~FDl~H~GHi~~L~~a~~~g~~livgv~~d~ 287 (296)
..|+++.|+||+||.||+.++++|++++|+|+|++.++.
T Consensus 12 ~~i~i~~GsFdP~H~GHl~l~~~A~~~~D~viv~v~~~~ 50 (173)
T 1vlh_A 12 HMKAVYPGSFDPITLGHVDIIKRALSIFDELVVLVTENP 50 (173)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTCSEEEEEEECCT
T ss_pred ceEEEEEEEECcCcHHHHHHHHHHHHHCCEEEEEEeCCC
Confidence 467999999999999999999999999999999999874
No 46
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3pnb_A* 4e1a_A 3lcj_A 3rba_A* 1tfu_A* 3rff_A 3rhs_A* 3uc5_A*
Probab=98.22 E-value=8.7e-07 Score=77.05 Aligned_cols=48 Identities=31% Similarity=0.378 Sum_probs=37.6
Q ss_pred cCCCCC-CCCCeEEEEeCcccccCHHHHHHHHHHHhCCCEEEEEEeCch
Q 022469 240 SNGKGP-GPDARIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQ 287 (296)
Q Consensus 240 ~~~~~~-~~~~~~v~~~G~FDl~H~GHi~~L~~a~~~g~~livgv~~d~ 287 (296)
|+|--| ..++++++..|+||++|.||+.++++|++++|+|||++..+.
T Consensus 11 ~~~~~~~~~~mki~i~~GsFDPiH~GHl~ii~~A~~~~D~Viv~v~~np 59 (177)
T 3nbk_A 11 SSGLVPRGSHMTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNP 59 (177)
T ss_dssp ---------CCCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEECCCT
T ss_pred cCCcccCCCCCEEEEEEEeeCCCCHHHHHHHHHHHHHCCEEEEEEcCCC
Confidence 344333 345689999999999999999999999999999999999774
No 47
>3k9w_A Phosphopantetheine adenylyltransferase; niaid, ssgcid, seattle structural genomics center for infect disease, coenzyme A, COA; HET: 4PS ADE PG4; 1.60A {Burkholderia pseudomallei} PDB: 3ikz_A* 3pxu_A*
Probab=98.19 E-value=1.1e-06 Score=76.98 Aligned_cols=39 Identities=28% Similarity=0.514 Sum_probs=36.9
Q ss_pred CeEEEEeCcccccCHHHHHHHHHHHhCCCEEEEEEeCch
Q 022469 249 ARIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQ 287 (296)
Q Consensus 249 ~~~v~~~G~FDl~H~GHi~~L~~a~~~g~~livgv~~d~ 287 (296)
++++++.|+||.+|.||+.++++|++.+|+|+|++.+|.
T Consensus 22 mki~v~~GsFDpiH~GHl~li~~A~~~~d~viv~v~~~p 60 (187)
T 3k9w_A 22 MVVAVYPGTFDPLTRGHEDLVRRASSIFDTLVVGVADSR 60 (187)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEEECCG
T ss_pred cEEEEEEEeCCcCcHHHHHHHHHHHHHCCcEEEEEecCC
Confidence 589999999999999999999999999999999999874
No 48
>2ejc_A Pantoate--beta-alanine ligase; X-RAY diffraction, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Thermotoga maritima}
Probab=97.70 E-value=2.2e-05 Score=72.73 Aligned_cols=41 Identities=27% Similarity=0.462 Sum_probs=35.9
Q ss_pred CCeEEEEeCcccccCHHHHHHHHHHHhCCCEEEEEE--eCchhh
Q 022469 248 DARIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGI--HNDQTV 289 (296)
Q Consensus 248 ~~~~v~~~G~FDl~H~GHi~~L~~a~~~g~~livgv--~~d~~~ 289 (296)
+++++++ |+||-+|.||+.++++|++.+|.+||++ |.++..
T Consensus 21 g~~V~~v-gtfdgLH~GH~sLI~~A~~~ad~vVVSffvnP~qf~ 63 (280)
T 2ejc_A 21 KKTIGFV-PTMGYLHEGHLSLVRRARAENDVVVVSIFVNPTQFG 63 (280)
T ss_dssp TCCEEEE-EECSCCCHHHHHHHHHHHHHSSEEEEEECCCGGGCC
T ss_pred CCEEEEE-cCCccccHHHHHHHHHHHHhCCEEEEEEeCChHHhc
Confidence 4578888 9999999999999999999999999999 555544
No 49
>3uk2_A Pantothenate synthetase; AMP, structural genomics, seattle S genomics center for infectious disease, ssgcid, ligase; HET: AMP; 2.25A {Burkholderia thailandensis} SCOP: c.26.1.0
Probab=97.64 E-value=0.00012 Score=67.90 Aligned_cols=78 Identities=19% Similarity=0.194 Sum_probs=59.1
Q ss_pred hHHHHHhhcCCCCeEEEEeCcCCcCCHHHHHHHHHHHHhcCeEEEEEeCChhh-hhcCC--CCCCCHHHHHHHHHhcCCc
Q 022469 39 DRWLQWTRKKKKPVRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEI-IANKG--PPVTPLHERMIMVNAVKWV 115 (296)
Q Consensus 39 ~~~~~~~~~~~~~~rV~~~G~FD~vH~GH~~lL~qAk~lgd~LiVgV~sD~~i-~~~Kg--~pi~s~eER~~~l~~~k~V 115 (296)
.+++...+. .+ ++-+..+..++|.||+.++++|++.++.++|.+..+|.- ..... +.+.+.+++.++++++ +|
T Consensus 12 ~~lr~~~~~-g~--~ig~VPTMG~LH~GH~sLi~~A~~~~d~vVvSifvnP~qf~~~ed~~~yprt~e~d~~ll~~~-Gv 87 (283)
T 3uk2_A 12 QELRDQLRG-QN--RTAFVPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGPNEDFDKYPRTLQEDIEKLQKE-NV 87 (283)
T ss_dssp HHHHHHTTT-CS--SCEEEEECSSCCHHHHHHHHHHHTTCSSEEEEECCCGGGSCTTSCTTTSCCCHHHHHHHHHTT-TC
T ss_pred HHHHHHHHc-CC--eEEEECCCCcccHHHHHHHHHHHHhCCEEEEEEcCCHHHcCCcccccccCCCHHHHHHHHHHc-CC
Confidence 445555433 22 366777999999999999999999999888888777642 11111 4688999999999998 89
Q ss_pred cEEEE
Q 022469 116 DEVIS 120 (296)
Q Consensus 116 D~Vv~ 120 (296)
|.++.
T Consensus 88 D~vF~ 92 (283)
T 3uk2_A 88 YVLFA 92 (283)
T ss_dssp SEEEC
T ss_pred CEEEe
Confidence 98874
No 50
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A*
Probab=97.51 E-value=6e-05 Score=68.00 Aligned_cols=39 Identities=26% Similarity=0.195 Sum_probs=36.2
Q ss_pred CeEEEEeCcccccCHHHHHHHHHHHhCC--CEEEEEEeCch
Q 022469 249 ARIIYIDGAFDLFHAGHVEILRIARGLG--DFLLVGIHNDQ 287 (296)
Q Consensus 249 ~~~v~~~G~FDl~H~GHi~~L~~a~~~g--~~livgv~~d~ 287 (296)
+++++..|+||.+|.||+.++++|++.+ |.|++++..|.
T Consensus 23 ~~i~i~~GsFdPiH~GHl~li~~a~~~~~ld~v~v~~~~~~ 63 (242)
T 1yum_A 23 KRIGLFGGTFDPVHIGHMRSAVEMAEQFALDELRLLPNARP 63 (242)
T ss_dssp CEEEEEEECCTTCCHHHHHHHHHHHHHHTCSEEEEEECCCC
T ss_pred ceEEEEEeeCcHhhHHHHHHHHHHHHHcCCCEEEEEEcCCC
Confidence 5789999999999999999999999887 99999999885
No 51
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=97.46 E-value=0.00065 Score=63.71 Aligned_cols=76 Identities=22% Similarity=0.277 Sum_probs=56.8
Q ss_pred HHHHHhhcCCCCeEEE--EeCcCCcCCHHHHHHHHHHHHhcCeEEEEEeCChh-hhhcCC--CCCCCHHHHHHHHHhcCC
Q 022469 40 RWLQWTRKKKKPVRVY--MDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAE-IIANKG--PPVTPLHERMIMVNAVKW 114 (296)
Q Consensus 40 ~~~~~~~~~~~~~rV~--~~G~FD~vH~GH~~lL~qAk~lgd~LiVgV~sD~~-i~~~Kg--~pi~s~eER~~~l~~~k~ 114 (296)
++...|+...+.+ ++ +.| .+|-||+.|+++|++.+|.++|.|.-+|. +..... ...-++++..+++++. +
T Consensus 33 ~~~~~~r~~g~~I-gfVPTMG---~LH~GHlsLi~~A~~~~d~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~-G 107 (314)
T 3inn_A 33 QALAPARQQGKKI-GFVPTMG---YLHKGHLELVRRARVENDVTLVSIFVNPLQFGANEDLGRYPRDLERDAGLLHDA-Q 107 (314)
T ss_dssp HHHHHHHHTTCCE-EEEEECS---SCCHHHHHHHHHHHHHCSEEEEEECCCGGGSCTTSSTTTCCCCHHHHHHHHHHT-T
T ss_pred HHHHHHHHcCCeE-EEEcCCC---ccCHHHHHHHHHHHHhCCEEEEEECCChhhcCCCccccccCCCHHHHHHHHHhC-C
Confidence 3444566665554 66 677 59999999999999999999999877763 222111 3567899999999998 8
Q ss_pred ccEEEE
Q 022469 115 VDEVIS 120 (296)
Q Consensus 115 VD~Vv~ 120 (296)
||.++.
T Consensus 108 vD~vF~ 113 (314)
T 3inn_A 108 VDYLFA 113 (314)
T ss_dssp CSEEEC
T ss_pred CCEEEC
Confidence 998864
No 52
>3q12_A Pantoate--beta-alanine ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: PAF; 1.58A {Yersinia pestis} SCOP: c.26.1.4 PDB: 3q10_A* 3mue_A 1iho_A 3guz_A*
Probab=97.16 E-value=0.00078 Score=62.49 Aligned_cols=75 Identities=19% Similarity=0.199 Sum_probs=53.3
Q ss_pred HHHHhhcCCCCeEEE--EeCcCCcCCHHHHHHHHHHHHhcCeEEEEEeCChh-hhhcCC--CCCCCHHHHHHHHHhcCCc
Q 022469 41 WLQWTRKKKKPVRVY--MDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAE-IIANKG--PPVTPLHERMIMVNAVKWV 115 (296)
Q Consensus 41 ~~~~~~~~~~~~rV~--~~G~FD~vH~GH~~lL~qAk~lgd~LiVgV~sD~~-i~~~Kg--~pi~s~eER~~~l~~~k~V 115 (296)
+...|+...+.+ ++ +.|+ +|-||+.++++|++.+|.++|+|.-+|. +..+.. ...-+.++=.+++++. +|
T Consensus 16 ~~~~~r~~g~~I-gfVPTMG~---LH~GHlsLv~~Ar~~~d~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~~l~~~-gv 90 (287)
T 3q12_A 16 QIRRWRQEGKRI-ALVPTMGN---LHEGHMTLVDEAKTRADVVVVTIFVNPLQFERPDDLAHYPRTLQEDCEKLTRH-GA 90 (287)
T ss_dssp HHHHHHHTTCCE-EEEEECSS---CCHHHHHHHHHHHTTSSEEEEEECCCGGGCSSHHHHHHSCCCHHHHHHHHHHH-TC
T ss_pred HHHHHHHcCCeE-EEEcCCCc---ccHHHHHHHHHHHHhCCEEEEEeccCcccCCCcchhhcCCCCHHHHHHHHHHC-CC
Confidence 444556665554 77 8887 9999999999999999999999876652 110000 1335677778888887 79
Q ss_pred cEEEE
Q 022469 116 DEVIS 120 (296)
Q Consensus 116 D~Vv~ 120 (296)
|.++.
T Consensus 91 d~vF~ 95 (287)
T 3q12_A 91 DLVFA 95 (287)
T ss_dssp SEEEC
T ss_pred CEEEC
Confidence 98774
No 53
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A*
Probab=96.70 E-value=0.0073 Score=55.94 Aligned_cols=74 Identities=19% Similarity=0.268 Sum_probs=51.5
Q ss_pred HHHHhhcCCCCeEEE--EeCcCCcCCHHHHHHHHHHHHhcCeEEEEEeCChh-hhhcCC--CCCCCHHHHHHHHHhcCCc
Q 022469 41 WLQWTRKKKKPVRVY--MDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAE-IIANKG--PPVTPLHERMIMVNAVKWV 115 (296)
Q Consensus 41 ~~~~~~~~~~~~rV~--~~G~FD~vH~GH~~lL~qAk~lgd~LiVgV~sD~~-i~~~Kg--~pi~s~eER~~~l~~~k~V 115 (296)
+...++...+.+ ++ +.|+ +|-||+.|+++|++ +|.++|.|.-+|. +..+.. ...-+.++=.+++++. +|
T Consensus 16 ~~~~~~~~g~~I-g~VPTMGa---LH~GHlsLv~~Ar~-~d~VVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~-gv 89 (285)
T 3mxt_A 16 IVKDWKSHQLSI-GYVPTMGF---LHDGHLSLVKHAKT-QDKVIVSIFVNPMQFGPNEDFSSYPRDLERDIKMCQDN-GV 89 (285)
T ss_dssp HHHHHHHTTCCE-EEEEECSS---CCHHHHHHHHHHTT-SSEEEEEECCCGGGCCTTSCTTTSCCCHHHHHHHHHHT-TC
T ss_pred HHHHHHHcCCeE-EEEcCCCc---ccHHHHHHHHHHHh-CCEEEEEeccCccccCCchhhhcCCCCHHHHHHHHHHC-CC
Confidence 334455555543 44 5564 99999999999999 9999999876663 211111 2445678888889987 79
Q ss_pred cEEEE
Q 022469 116 DEVIS 120 (296)
Q Consensus 116 D~Vv~ 120 (296)
|.++.
T Consensus 90 D~vF~ 94 (285)
T 3mxt_A 90 DMVFI 94 (285)
T ss_dssp SEEEC
T ss_pred CEEEC
Confidence 98774
No 54
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}
Probab=96.44 E-value=0.0014 Score=61.97 Aligned_cols=39 Identities=18% Similarity=0.184 Sum_probs=32.7
Q ss_pred CeEEEEeCcccccCHHHHHHHHHHHhCCCE---EEEEEeCch
Q 022469 249 ARIIYIDGAFDLFHAGHVEILRIARGLGDF---LLVGIHNDQ 287 (296)
Q Consensus 249 ~~~v~~~G~FDl~H~GHi~~L~~a~~~g~~---livgv~~d~ 287 (296)
...|++-|+||.+|.||..+|++|++.++. ..|.++.|.
T Consensus 15 ~~~vvtiG~FDGvH~GHq~Li~~a~~~a~~~~~~~vvvtFdp 56 (338)
T 2x0k_A 15 DNSAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDP 56 (338)
T ss_dssp CCEEEEESCCTTCCHHHHHHHHHHHHHHHHHTCEEEEEEESS
T ss_pred CCeEEEEEeCCcccHHHHHHHHHHHHHHHHcCCcEEEEEecC
Confidence 357899999999999999999999987753 467787775
No 55
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5
Probab=96.24 E-value=0.24 Score=47.74 Aligned_cols=106 Identities=17% Similarity=0.168 Sum_probs=64.8
Q ss_pred hHHHHHhhcCCCCeEEEEeCcCCcCCHHHHHHH-HHHHHhcCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHhcC--C-
Q 022469 39 DRWLQWTRKKKKPVRVYMDGCFDMMHYGHCNAL-RQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNAVK--W- 114 (296)
Q Consensus 39 ~~~~~~~~~~~~~~rV~~~G~FD~vH~GH~~lL-~qAk~lgd~LiVgV~sD~~i~~~Kg~pi~s~eER~~~l~~~k--~- 114 (296)
.++++.++..... +|++..+++++|.||..++ +.|.+.++.|+ +|+- +-..| +--.+.+-|++..+.+. +
T Consensus 176 ~e~R~~f~~~gw~-~VvafqtrNP~HraH~e~~~r~a~e~~~~ll--lhPl--vG~tK-~~Dip~~vR~~~~~~~l~~yp 249 (395)
T 1r6x_A 176 AQLRLEFQSRQWD-RVVAFQTRNPMHRAHRELTVRAAREANAKVL--IHPV--VGLTK-PGDIDHHTRVRVYQEIIKRYP 249 (395)
T ss_dssp HHHHHHHHHTTCC-CEEEECCSSCCCHHHHHHHHHHHHHTTCEEE--ECCB--CSBCC-TTCCCHHHHHHHHHHHGGGSS
T ss_pred HHHHHHHHhcCCC-cEEEeccCCCcchhhHHHHHHHHHHcCCcEE--EEEC--CCCCC-CCCCCHHHHHHHHHHHHHhCC
Confidence 5677776655554 4888999999999996555 55555566444 3331 11122 22468899999888752 1
Q ss_pred ccEEEE-cCCCC--c---cHHHHHHH-HHhcCccEEEEcCCCC
Q 022469 115 VDEVIS-DAPYA--I---TKDFMKKL-FDEYNIDYIIHGDDPC 150 (296)
Q Consensus 115 VD~Vv~-~~py~--~---t~efl~~l-l~~~~~d~VV~GdD~~ 150 (296)
-+.++. ..|+. + .+..+..+ -++|+|.+.++|-|..
T Consensus 250 ~~~v~l~~~p~~mryAGPrEai~HAiiRkN~GcthfIVGRDhA 292 (395)
T 1r6x_A 250 NGIAFLSLLPLAMRMSGDREAVWHAIIRKNYGASHFIVGRDHA 292 (395)
T ss_dssp TTCEEECCBCCBCCCCHHHHHHHHHHHHHHTTCSEEEECTTTT
T ss_pred CccEEEEecchhhhhcCcHHHHHHHHHHHHcCCceEEECCCCC
Confidence 233433 12222 1 23344554 3469999999999975
No 56
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=96.18 E-value=0.0031 Score=59.09 Aligned_cols=39 Identities=26% Similarity=0.385 Sum_probs=31.1
Q ss_pred CeEEEEeCcccccCHHHHHHHHHHHhCCCEE---EEEEeCch
Q 022469 249 ARIIYIDGAFDLFHAGHVEILRIARGLGDFL---LVGIHNDQ 287 (296)
Q Consensus 249 ~~~v~~~G~FDl~H~GHi~~L~~a~~~g~~l---ivgv~~d~ 287 (296)
...|++-|.||-+|.||..+|++|++.++.+ .|.++-|.
T Consensus 20 ~~~vvtiG~FDGvH~GHq~li~~a~~~a~~~~~~~vV~TFdp 61 (308)
T 3op1_A 20 SDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNE 61 (308)
T ss_dssp SCEEEEESCCSSCCHHHHHHHHHHHHHSSTTCCCEEEEEESS
T ss_pred CCeEEEEecCCcccHHHHHHHHHHHHHHHhcCCceEEEEecC
Confidence 4679999999999999999999999877532 44455553
No 57
>3q12_A Pantoate--beta-alanine ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: PAF; 1.58A {Yersinia pestis} SCOP: c.26.1.4 PDB: 3q10_A* 3mue_A 1iho_A 3guz_A*
Probab=96.14 E-value=0.0062 Score=56.48 Aligned_cols=36 Identities=28% Similarity=0.472 Sum_probs=32.0
Q ss_pred CCeEEE--EeCcccccCHHHHHHHHHHHhCCCEEEEEEeCc
Q 022469 248 DARIIY--IDGAFDLFHAGHVEILRIARGLGDFLLVGIHND 286 (296)
Q Consensus 248 ~~~~v~--~~G~FDl~H~GHi~~L~~a~~~g~~livgv~~d 286 (296)
+++|++ +-|+ +|.||+.++++||+.+|.+||+|.-+
T Consensus 24 g~~IgfVPTMG~---LH~GHlsLv~~Ar~~~d~vVVSIFVN 61 (287)
T 3q12_A 24 GKRIALVPTMGN---LHEGHMTLVDEAKTRADVVVVTIFVN 61 (287)
T ss_dssp TCCEEEEEECSS---CCHHHHHHHHHHHTTSSEEEEEECCC
T ss_pred CCeEEEEcCCCc---ccHHHHHHHHHHHHhCCEEEEEeccC
Confidence 567888 6786 99999999999999999999999754
No 58
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=95.75 E-value=0.3 Score=48.54 Aligned_cols=106 Identities=18% Similarity=0.197 Sum_probs=65.3
Q ss_pred hHHHHHhhcCCCCeEEEEeCcCCcCCHHHHHHH-HHHHHhcCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHhcC--C-
Q 022469 39 DRWLQWTRKKKKPVRVYMDGCFDMMHYGHCNAL-RQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNAVK--W- 114 (296)
Q Consensus 39 ~~~~~~~~~~~~~~rV~~~G~FD~vH~GH~~lL-~qAk~lgd~LiVgV~sD~~i~~~Kg~pi~s~eER~~~l~~~k--~- 114 (296)
.++++.+...... +|++..+++++|.||..++ +.|.+.++.|++-..--. .| +--.+.+-|++..+.+- +
T Consensus 177 ~e~r~~f~~~gw~-~v~afqtrnP~HraH~e~~~~~a~e~~~~lll~pl~g~----~k-~~di~~~~r~~~~~~~~~~yp 250 (511)
T 1g8f_A 177 AQLRLEFQSRQWD-RVVAFQTRNPMHRAHRELTVRAAREANAKVLIHPVVGL----TK-PGDIDHHTRVRVYQEIIKRYP 250 (511)
T ss_dssp HHHHHHHHHTTCC-CEEEEEESSCCCHHHHHHHHHHHHHHTCEEEEEEBCSB----CS-TTCCCHHHHHHHHHHHGGGSC
T ss_pred HHHHHHHHHcCCC-cEEEEecCCCCchHHHHHHHHHHHHcCCcEEEEECCCC----CC-CCCCCHHHHHHHHHHHHHhCC
Confidence 5677776655544 4888999999999995554 556666665543222111 22 22468899999888752 1
Q ss_pred ccEEEE-cCCCCc-----cHHHHHHHH-HhcCccEEEEcCCCC
Q 022469 115 VDEVIS-DAPYAI-----TKDFMKKLF-DEYNIDYIIHGDDPC 150 (296)
Q Consensus 115 VD~Vv~-~~py~~-----t~efl~~ll-~~~~~d~VV~GdD~~ 150 (296)
-+.++. ..|+.. .+..+..++ ++|+|.+.++|-|..
T Consensus 251 ~~~~~l~~~p~~m~yaGprea~~hai~r~n~G~th~IvGrdhA 293 (511)
T 1g8f_A 251 NGIAFLSLLPLAMRMSGDREAVWHAIIRKNYGASHFIVGRDHA 293 (511)
T ss_dssp TTSEEECCBCCBCCCCHHHHHHHHHHHHHHTTCSEEECCTTTT
T ss_pred cccEEEEecchhhhccCcHHHHHHHHHHHhCCCceEEeCCCCC
Confidence 233332 234331 233445543 469999999999975
No 59
>3n8h_A Pantothenate synthetase; alpha-beta sandwich, ligase, structural genomics, structural of infectious diseases; HET: MSE AMP GOL; 2.00A {Francisella tularensis subsp} PDB: 3qtt_A*
Probab=95.48 E-value=0.034 Score=50.92 Aligned_cols=66 Identities=14% Similarity=0.278 Sum_probs=47.0
Q ss_pred EEEeCcCCcCCHHHHHHHHHHHHhcCeEEEEEeCChh-hhhcCC--CCCCCHHHHHHHHHhcCCccEEEE
Q 022469 54 VYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAE-IIANKG--PPVTPLHERMIMVNAVKWVDEVIS 120 (296)
Q Consensus 54 V~~~G~FD~vH~GH~~lL~qAk~lgd~LiVgV~sD~~-i~~~Kg--~pi~s~eER~~~l~~~k~VD~Vv~ 120 (296)
+-+.-+--.+|-||+.|+++|++.+|.++|.|.-+|. +..+.. ...-+.++=.+++++. +||.++.
T Consensus 26 ig~VPTMGaLH~GHlsLv~~Ar~~~d~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~-gvD~vF~ 94 (264)
T 3n8h_A 26 IGFVPTMGALHNGHISLIKKAKSENDVVIVSIFVNPTQFNNPNDYQTYPNQLQQDIQILASL-DVDVLFN 94 (264)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHCSEEEEEECCCGGGCSCHHHHHHSCCCHHHHHHHHHHT-TCSEEEC
T ss_pred EEEECCCcchhHHHHHHHHHHHHhCCEEEEEEccCcccCCCcchhhcCCCCHHHHHHHHHHC-CCCEEEC
Confidence 4444466689999999999999999999998876652 110000 1335667778888887 7997774
No 60
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii}
Probab=95.11 E-value=0.025 Score=53.96 Aligned_cols=36 Identities=14% Similarity=0.249 Sum_probs=29.2
Q ss_pred CCeEEEEeCcccccCHHHHHHHHHHHhCCCEEEEEEe
Q 022469 248 DARIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIH 284 (296)
Q Consensus 248 ~~~~v~~~G~FDl~H~GHi~~L~~a~~~g~~livgv~ 284 (296)
++++|.+-|.||.||.||..++++|++ .+.+++-++
T Consensus 51 ~~~~v~~lG~FDg~H~GHq~lI~~a~~-~~~~~~Vms 86 (357)
T 3gmi_A 51 KDKIVCDFTEYNPLHKGHKYALEKGKE-HGIFISVLP 86 (357)
T ss_dssp CCCEEEEECCCTTCCHHHHHHHHHHHT-SSEEEEEEC
T ss_pred CCCEEEEEEecCccCHHHHHHHHHHHH-cCCeEEEEc
Confidence 357899999999999999999999999 444444443
No 61
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=93.69 E-value=0.066 Score=50.14 Aligned_cols=36 Identities=36% Similarity=0.528 Sum_probs=31.8
Q ss_pred CCeEEE--EeCcccccCHHHHHHHHHHHhCCCEEEEEEeCc
Q 022469 248 DARIIY--IDGAFDLFHAGHVEILRIARGLGDFLLVGIHND 286 (296)
Q Consensus 248 ~~~~v~--~~G~FDl~H~GHi~~L~~a~~~g~~livgv~~d 286 (296)
+++|++ +-|+ +|.||+.++++|++.+|.+||.|.-+
T Consensus 42 g~~IgfVPTMG~---LH~GHlsLi~~A~~~~d~vVVSIFVN 79 (314)
T 3inn_A 42 GKKIGFVPTMGY---LHKGHLELVRRARVENDVTLVSIFVN 79 (314)
T ss_dssp TCCEEEEEECSS---CCHHHHHHHHHHHHHCSEEEEEECCC
T ss_pred CCeEEEEcCCCc---cCHHHHHHHHHHHHhCCEEEEEECCC
Confidence 567888 6786 99999999999999999999999754
No 62
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=93.26 E-value=0.76 Score=45.75 Aligned_cols=106 Identities=16% Similarity=0.136 Sum_probs=65.4
Q ss_pred hHHHHHhhcCCCCeEEEEeCcCCcCCHHHHHHHHHHHH-hcCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHhcC----
Q 022469 39 DRWLQWTRKKKKPVRVYMDGCFDMMHYGHCNALRQARA-LGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNAVK---- 113 (296)
Q Consensus 39 ~~~~~~~~~~~~~~rV~~~G~FD~vH~GH~~lL~qAk~-lgd~LiVgV~sD~~i~~~Kg~pi~s~eER~~~l~~~k---- 113 (296)
.++++.+...... +|++.=++.++|.||..++++|.. .++.|+| ++- +-..| +--.+.+-|++.++.+.
T Consensus 152 ~e~r~~~~~~gw~-~v~afqtrnP~Hr~H~~l~~~a~~~~~~~llv--~p~--~g~~k-~~di~~~~R~~~~~~~~~~~~ 225 (546)
T 2gks_A 152 KQVREEIKSLGLD-KIVAFQTRNPMHRVHEELTKRAMEKVGGGLLL--HPV--VGLTK-PGDVDVYTRMRIYKVLYEKYY 225 (546)
T ss_dssp HHHHHHHHHHTCS-CEEEECCSSCCCHHHHHHHHHHHHHHTSEEEE--CCB--CSBCC-TTSCCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHcCCC-cEEEEecCCCCcHHHHHHHHHHHHhcCCcEEE--EeC--cCCCC-CCCCCHHHHHHHHHHHHHhcC
Confidence 5666666544444 377788999999999999999996 6776654 321 11112 22468899999887751
Q ss_pred CccEEEE-cCCCC--c---cHHHHHHH-HHhcCccEEEEcCCCC
Q 022469 114 WVDEVIS-DAPYA--I---TKDFMKKL-FDEYNIDYIIHGDDPC 150 (296)
Q Consensus 114 ~VD~Vv~-~~py~--~---t~efl~~l-l~~~~~d~VV~GdD~~ 150 (296)
--+.++. ..|+. + .+.-...+ .+.++|...++|-|+.
T Consensus 226 p~~~v~~~~~p~~m~~agprea~~ha~ir~n~G~th~ivgrdha 269 (546)
T 2gks_A 226 DKKKTILAFLPLAMRMAGPREALWHGIIRRNYGATHFIVGRDHA 269 (546)
T ss_dssp CTTTEEECBBCCBCCCCTHHHHHHHHHHHHHTTCSEEEECTTTT
T ss_pred CCCcEEEeecCchhhccCchHHHHHHHHHHhCCCCeEEECCCCC
Confidence 1133333 12221 1 12333443 3569999999997764
No 63
>3ag6_A Pantothenate synthetase; ATP-dependent enzyme, ATP-binding, nucleotide-binding, pantothenate biosynthesis; HET: PAJ PG4; 1.85A {Staphylococcus aureus} PDB: 3ag5_A* 2x3f_A*
Probab=92.17 E-value=0.19 Score=46.47 Aligned_cols=37 Identities=24% Similarity=0.462 Sum_probs=31.2
Q ss_pred CCeEEE--EeCcccccCHHHHHHHHHHHhCCCEEEEEEeCch
Q 022469 248 DARIIY--IDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQ 287 (296)
Q Consensus 248 ~~~~v~--~~G~FDl~H~GHi~~L~~a~~~g~~livgv~~d~ 287 (296)
+++|++ +-|. +|.||..++++|++.++.+||.+....
T Consensus 22 g~~I~fVpTmG~---lH~GH~~LI~~a~~~a~~vVvsffvnP 60 (283)
T 3ag6_A 22 GTTIGFIPTMGA---LHDGHLTMVRESVSTNDITIVSVFVNP 60 (283)
T ss_dssp TCCEEEEEECSS---CCHHHHHHHHHHHTTSSEEEEEECCCG
T ss_pred CCcEEEEECCcc---ccHHHHHHHHHHHHhCCEEEEEEeCCh
Confidence 456666 6776 999999999999999999999997653
No 64
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A*
Probab=92.15 E-value=0.15 Score=47.10 Aligned_cols=35 Identities=29% Similarity=0.527 Sum_probs=29.3
Q ss_pred CCeEEEE--eCcccccCHHHHHHHHHHHhCCCEEEEEEeCc
Q 022469 248 DARIIYI--DGAFDLFHAGHVEILRIARGLGDFLLVGIHND 286 (296)
Q Consensus 248 ~~~~v~~--~G~FDl~H~GHi~~L~~a~~~g~~livgv~~d 286 (296)
+++|.+| -|+ +|.||+.++++|++ +|.+||.|.-+
T Consensus 24 g~~Ig~VPTMGa---LH~GHlsLv~~Ar~-~d~VVVSIFVN 60 (285)
T 3mxt_A 24 QLSIGYVPTMGF---LHDGHLSLVKHAKT-QDKVIVSIFVN 60 (285)
T ss_dssp TCCEEEEEECSS---CCHHHHHHHHHHTT-SSEEEEEECCC
T ss_pred CCeEEEEcCCCc---ccHHHHHHHHHHHh-CCEEEEEeccC
Confidence 4567774 565 99999999999999 99999999754
No 65
>1v8f_A Pantoate-beta-alanine ligase; rossmann fold, dimer, structural genomics, riken STR genomics/proteomics initiative, RSGI; HET: P6G; 1.90A {Thermus thermophilus} SCOP: c.26.1.4 PDB: 1ufv_A
Probab=91.75 E-value=0.17 Score=46.62 Aligned_cols=35 Identities=23% Similarity=0.433 Sum_probs=30.7
Q ss_pred eEEEEeCcccccCHHHHHHHHHHHhCCCEEEEEEeCch
Q 022469 250 RIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQ 287 (296)
Q Consensus 250 ~~v~~~G~FDl~H~GHi~~L~~a~~~g~~livgv~~d~ 287 (296)
..|.+-|. +|.||..++++|++.++.+||.+..+.
T Consensus 20 ~~VpTmG~---lH~GH~~Li~~A~~~a~~vVvsff~nP 54 (276)
T 1v8f_A 20 GFVPTMGY---LHRGHLALVERARRENPFVVVSVFVNP 54 (276)
T ss_dssp EEEEECSS---CCHHHHHHHHHHHHHCSEEEEEECCCG
T ss_pred eEEEeCCC---ccHHHHHHHHHHHHhCCEEEEEEECCH
Confidence 34557787 999999999999999999999998874
No 66
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=91.06 E-value=3.4 Score=41.14 Aligned_cols=106 Identities=7% Similarity=0.036 Sum_probs=62.5
Q ss_pred hHHHHHhhcCCCCeEEEEeCcCCcCCHHHHHHHHHHH-HhcCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHhcC--C-
Q 022469 39 DRWLQWTRKKKKPVRVYMDGCFDMMHYGHCNALRQAR-ALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNAVK--W- 114 (296)
Q Consensus 39 ~~~~~~~~~~~~~~rV~~~G~FD~vH~GH~~lL~qAk-~lgd~LiVgV~sD~~i~~~Kg~pi~s~eER~~~l~~~k--~- 114 (296)
.++++.+....... |++.=+-+++|.+|..++++|. +.++.|+ +|+- +-..| +--.+.+-|++..+.+. +
T Consensus 152 ~e~r~~~~~~gw~~-v~afqtrnp~Hrah~~~~~~~~~~~~~~ll--l~pl--~g~~k-~~d~~~~~r~~~~~~~~~~~p 225 (552)
T 3cr8_A 152 AELRALFVRRGWRR-IIAWQARQPMHRAQYEFCLKSAIENEANLL--LHPQ--VGGDI-TEAPAYFGLVRSFLAIRDRFP 225 (552)
T ss_dssp HHHHHHHHHTTCCS-EEEECCSSCCCHHHHHHHHHHHHHTTCEEE--ECCB--CCCCT-TTCTTHHHHHHHHHHHGGGSC
T ss_pred HHHHHHHHhcCCCc-eEEEecCCCCchHHHHHHHHHHHhcCCeEE--EEec--cCCCC-CCCCCHHHHHHHHHHHHHhCC
Confidence 56776665555443 6777899999999999999988 6666444 3331 11112 23467888998877752 1
Q ss_pred ccEEEE-cCCCCc-----cHHHHHHHH-HhcCccEEEEcCCCC
Q 022469 115 VDEVIS-DAPYAI-----TKDFMKKLF-DEYNIDYIIHGDDPC 150 (296)
Q Consensus 115 VD~Vv~-~~py~~-----t~efl~~ll-~~~~~d~VV~GdD~~ 150 (296)
-+.++. ..|+.. .+..+..++ ++|+|...++|-|..
T Consensus 226 ~~~~~l~~~p~~m~~agprea~~ha~~r~n~G~th~ivGrdha 268 (552)
T 3cr8_A 226 AATTQLSLLPAPPPEASGRALLLRAIVARNFGCSLLIAGGEHQ 268 (552)
T ss_dssp GGGEEECBBCSCCCCSCSHHHHHHHHHHHHHTCSEEEC-----
T ss_pred CccEEEeecchhhcccCcHHHHHHHHHHHhCCCCeeeeCCCCC
Confidence 233332 134321 234445543 469999999999864
No 67
>3n8h_A Pantothenate synthetase; alpha-beta sandwich, ligase, structural genomics, structural of infectious diseases; HET: MSE AMP GOL; 2.00A {Francisella tularensis subsp} PDB: 3qtt_A*
Probab=90.80 E-value=0.16 Score=46.51 Aligned_cols=39 Identities=21% Similarity=0.521 Sum_probs=31.0
Q ss_pred CCCeEEEEeCcccccCHHHHHHHHHHHhCCCEEEEEEeCc
Q 022469 247 PDARIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHND 286 (296)
Q Consensus 247 ~~~~~v~~~G~FDl~H~GHi~~L~~a~~~g~~livgv~~d 286 (296)
.+++|.+|. +---+|.||+.+.++|++.+|.+||.|.-+
T Consensus 22 ~g~~ig~VP-TMGaLH~GHlsLv~~Ar~~~d~vVVSIFVN 60 (264)
T 3n8h_A 22 KQQKIGFVP-TMGALHNGHISLIKKAKSENDVVIVSIFVN 60 (264)
T ss_dssp TTSCEEEEE-ECSSCCHHHHHHHHHHHHHCSEEEEEECCC
T ss_pred CCCcEEEEC-CCcchhHHHHHHHHHHHHhCCEEEEEEccC
Confidence 355677663 222589999999999999999999999754
No 68
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=90.38 E-value=6.1 Score=40.13 Aligned_cols=107 Identities=19% Similarity=0.070 Sum_probs=66.3
Q ss_pred hHHHHHhhcCCCCeEEEEeCcCCcCCHHHHHHHHHHHH-hcCe----EEEEEeCChhhhhcCCCCCCCHHHHHHHHHhcC
Q 022469 39 DRWLQWTRKKKKPVRVYMDGCFDMMHYGHCNALRQARA-LGDQ----LVVGVVSDAEIIANKGPPVTPLHERMIMVNAVK 113 (296)
Q Consensus 39 ~~~~~~~~~~~~~~rV~~~G~FD~vH~GH~~lL~qAk~-lgd~----LiVgV~sD~~i~~~Kg~pi~s~eER~~~l~~~k 113 (296)
.++++.+....... |++.=+-+++|.||..+++.|.+ .+|. -.+-+|+= +-..| +--.+.+-|++..+.+-
T Consensus 401 ~e~r~~f~~~gw~~-VvafqtrNP~HraHe~l~~~a~~~~~d~g~~~~~lll~pl--~G~tk-~~di~~~~r~~~~~~~~ 476 (630)
T 1x6v_B 401 TELKQKFKDMNADA-VSAFQLRNPVHNGHALLMQDTHKQLLERGYRRPVLLLHPL--GGWTK-DDDVPLMWRMKQHAAVL 476 (630)
T ss_dssp HHHHHHHHHTTCSE-EEEEEESSCCCHHHHHHHHHHHHHHHHHTCSSEEEEEEEB--CSCCC-TTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCe-EEEEecCCCccHHHHHHHHHHHHHHHhhccCCCcEEEEeC--cCCCC-CCCCCHHHHHHHHHHHH
Confidence 56666666655554 77777999999999999999986 3441 12223331 11112 23467888988777641
Q ss_pred ---C--ccEEEEcCCCC----c---cHHHHHHHH-HhcCccEEEEcCCCC
Q 022469 114 ---W--VDEVISDAPYA----I---TKDFMKKLF-DEYNIDYIIHGDDPC 150 (296)
Q Consensus 114 ---~--VD~Vv~~~py~----~---t~efl~~ll-~~~~~d~VV~GdD~~ 150 (296)
+ -+.+++ .+|- + .+..+..++ ++++|.++++|-|+.
T Consensus 477 ~~~y~p~~~~~l-~~~p~~mryaGPrEa~~hai~rkN~Gcth~IVGrdhA 525 (630)
T 1x6v_B 477 EEGVLNPETTVV-AIFPSPMMYAGPTEVQWHCRARMVAGANFYIVGRDPA 525 (630)
T ss_dssp HTTSSCGGGEEE-CCBCCCCCCCHHHHHHHHHHHHHHTTCSEEEECSSTT
T ss_pred HcCCCCCcceEE-eeccchhhhcCcHHHHHHHHHHHhCCCCeEEECCCCC
Confidence 1 144544 3332 2 233445544 459999999999985
No 69
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=89.93 E-value=1.4 Score=44.00 Aligned_cols=106 Identities=13% Similarity=0.053 Sum_probs=65.1
Q ss_pred hHHHHHhhcCCCCeEEEEeCcCCcCCHHHHHHHHHHHHh-cCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHhcC--C-
Q 022469 39 DRWLQWTRKKKKPVRVYMDGCFDMMHYGHCNALRQARAL-GDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNAVK--W- 114 (296)
Q Consensus 39 ~~~~~~~~~~~~~~rV~~~G~FD~vH~GH~~lL~qAk~l-gd~LiVgV~sD~~i~~~Kg~pi~s~eER~~~l~~~k--~- 114 (296)
.++++.+....... |++.=+++++|.||..++++|.+. ++.|+| ++ .+-..| +--.+.+-|++.++.+. +
T Consensus 179 ~e~r~~~~~~gw~~-v~afqtrnP~Hr~H~~l~~~a~~~~~~~llv--~p--l~g~~k-~~di~~~~R~~~~~~~~~~~p 252 (573)
T 1m8p_A 179 AELRVHFDKLGWSR-VVAFQTRNPMHRAHRELTVRAARSRQANVLI--HP--VVGLTK-PGDIDHFTRVRAYQALLPRYP 252 (573)
T ss_dssp HHHHHHHHHTTCCS-EEEECCSSCCCHHHHHHHHHHHHHTTCEEEE--CC--BCCCCC-TTCHHHHHHHHHHHHHGGGSS
T ss_pred HHHHHHHHHcCCCe-EEEEeeCCCcchhhHHHHHHHHHhcCCcEEE--Ee--CCCCCC-CCCCCHHHHHHHHHHHHHhCC
Confidence 56776665554443 677889999999999999988865 776554 32 110112 22357888999888751 1
Q ss_pred ccEEEEc-CCCC--c--cHH-HHHH-HHHhcCccEEEEcCCCC
Q 022469 115 VDEVISD-APYA--I--TKD-FMKK-LFDEYNIDYIIHGDDPC 150 (296)
Q Consensus 115 VD~Vv~~-~py~--~--t~e-fl~~-ll~~~~~d~VV~GdD~~ 150 (296)
-+.++.. .|+. + +.| .... +.+.++|..+++|-|+.
T Consensus 253 ~~~v~l~~~p~~m~~agprea~~ha~ir~n~G~th~ivgrdha 295 (573)
T 1m8p_A 253 NGMAVLGLLGLAMRMGGPREAIWHAIIRKNHGATHFIVGRDHA 295 (573)
T ss_dssp TTSEEECBBCCCCCCCHHHHHHHHHHHHHHHTCSEEEECTTTT
T ss_pred CCcEEEEecCchhhccCchHHHHHHHHHHHCCCCeEEECCCCC
Confidence 1334331 2222 2 222 3344 34568999999998764
No 70
>3cov_A Pantothenate synthetase; pantothenate biosynthesis, enzym ligase, drug design, ATP-binding, magnesium, metal-binding; 1.50A {Mycobacterium tuberculosis} SCOP: c.26.1.4 PDB: 3cow_A* 3coy_A* 3coz_A* 3imc_A* 3ime_A* 3img_A* 3iob_A* 3ioc_A* 3iod_A* 3ioe_A* 3iub_A* 3iue_A* 3ivc_A* 3ivg_A* 3ivx_A* 2a84_A* 1n2b_A* 1n2e_A* 1n2g_A* 1n2h_A* ...
Probab=87.36 E-value=0.62 Score=43.32 Aligned_cols=30 Identities=27% Similarity=0.582 Sum_probs=25.8
Q ss_pred cccccCHHHHHHHHHHHh-CCCEEEEEEeCc
Q 022469 257 AFDLFHAGHVEILRIARG-LGDFLLVGIHND 286 (296)
Q Consensus 257 ~FDl~H~GHi~~L~~a~~-~g~~livgv~~d 286 (296)
++.-+|.||..++++|++ .++.+||.+...
T Consensus 40 TmG~LH~GH~sLI~~A~~~~a~~vVvSffvn 70 (301)
T 3cov_A 40 TMGALHEGHLALVRAAKRVPGSVVVVSIFVN 70 (301)
T ss_dssp ECSCCCHHHHHHHHHHHTSTTEEEEEEECCC
T ss_pred cCCcccHHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 333399999999999999 999999998765
No 71
>3uk2_A Pantothenate synthetase; AMP, structural genomics, seattle S genomics center for infectious disease, ssgcid, ligase; HET: AMP; 2.25A {Burkholderia thailandensis} SCOP: c.26.1.0
Probab=82.93 E-value=0.89 Score=41.91 Aligned_cols=39 Identities=26% Similarity=0.571 Sum_probs=31.9
Q ss_pred CCeEEEEeCcccccCHHHHHHHHHHHhCCCEEEEEEeCch
Q 022469 248 DARIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQ 287 (296)
Q Consensus 248 ~~~~v~~~G~FDl~H~GHi~~L~~a~~~g~~livgv~~d~ 287 (296)
+++|.+| .+..=+|.||..++++|++.+|.+||.+.-+.
T Consensus 21 g~~ig~V-PTMG~LH~GH~sLi~~A~~~~d~vVvSifvnP 59 (283)
T 3uk2_A 21 QNRTAFV-PTMGNLHEGHLSLMRLARQHGDPVVASIFVNR 59 (283)
T ss_dssp CSSCEEE-EECSSCCHHHHHHHHHHHTTCSSEEEEECCCG
T ss_pred CCeEEEE-CCCCcccHHHHHHHHHHHHhCCEEEEEEcCCH
Confidence 4456655 46778999999999999999999999997653
No 72
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5
Probab=77.55 E-value=1.3 Score=41.97 Aligned_cols=30 Identities=23% Similarity=0.239 Sum_probs=26.2
Q ss_pred EEEeCcccccCHHHHHHHHHHHhCCCEEEE
Q 022469 252 IYIDGAFDLFHAGHVEILRIARGLGDFLLV 281 (296)
Q Consensus 252 v~~~G~FDl~H~GHi~~L~~a~~~g~~liv 281 (296)
|+.-|+||.+|.||..+.+.|.+..|.|++
T Consensus 158 VvafqTrNPiHrgH~~l~~~ale~~d~vll 187 (349)
T 1v47_A 158 VVAFQTRNAPHRAHEYLIRLGLELADGVLV 187 (349)
T ss_dssp EEEEEESSCCCHHHHHHHHHHHHHSSEEEE
T ss_pred EEEeecCCCCchHHHHHHHHHHHhCCcEEE
Confidence 555999999999999999999988887666
No 73
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5
Probab=74.65 E-value=1.3 Score=42.64 Aligned_cols=29 Identities=21% Similarity=0.154 Sum_probs=24.5
Q ss_pred EEEeCcccccCHHHHHHHHHHHhCC--CEEE
Q 022469 252 IYIDGAFDLFHAGHVEILRIARGLG--DFLL 280 (296)
Q Consensus 252 v~~~G~FDl~H~GHi~~L~~a~~~g--~~li 280 (296)
|+..|+||.+|.||..+.+.|.+.. |.|+
T Consensus 195 VvafqTrNPiHrgH~~l~~~Ale~~~~D~vl 225 (396)
T 1jhd_A 195 VVAFQTRNPMHRAHEELCRMAMESLDADGVV 225 (396)
T ss_dssp EEEEEESSCCCHHHHHHHHHHHHHHTCSEEE
T ss_pred EEEeccCCCCchHHHHHHHHHHHHcCCCeEE
Confidence 5559999999999999999998765 6555
No 74
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=30.99 E-value=30 Score=22.94 Aligned_cols=29 Identities=14% Similarity=0.193 Sum_probs=16.4
Q ss_pred ccccchhhhhhhhhhhhhhhhHhhhhHHh
Q 022469 5 GKEQSARILATCLIAGAVMVAGFSLLTLY 33 (296)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (296)
|.+++.+.++...+||++..+..++++|+
T Consensus 4 ~~~s~~~aIA~gVVgGv~~v~ii~~~~~~ 32 (44)
T 2l2t_A 4 PQHARTPLIAAGVIGGLFILVIVGLTFAV 32 (44)
T ss_dssp CSSCSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcceEEEeehHHHHHHHHHHHHHHH
Confidence 34555666777777776444444444443
No 75
>2pp6_A Gifsy-2 prophage ATP-binding sugar transporter-LI protein; beta barrel, 4 helix bundle, structural genomics, PSI-2; 2.70A {Salmonella typhimurium LT2} SCOP: b.106.1.2
Probab=30.99 E-value=32 Score=26.83 Aligned_cols=22 Identities=23% Similarity=0.442 Sum_probs=18.0
Q ss_pred ccceeeeccCCCCCCCCCeEEE
Q 022469 232 TSRRIVQFSNGKGPGPDARIIY 253 (296)
Q Consensus 232 t~~~i~~f~~~~~~~~~~~~v~ 253 (296)
|.+.++-||+|+.|..++++++
T Consensus 51 ~~rsLvvFSsgYrP~r~D~Vv~ 72 (102)
T 2pp6_A 51 NGKNVVVFSGNVIPRRGDRVVL 72 (102)
T ss_dssp -CEEEEECCSSCCCCTTCEEEE
T ss_pred CceEEEEecCCcccCCCCEEEE
Confidence 5667899999999999888774
No 76
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=23.59 E-value=44 Score=33.17 Aligned_cols=30 Identities=17% Similarity=0.094 Sum_probs=23.8
Q ss_pred EEEeCcccccCHHHHHHHHHHHh-CCCEEEE
Q 022469 252 IYIDGAFDLFHAGHVEILRIARG-LGDFLLV 281 (296)
Q Consensus 252 v~~~G~FDl~H~GHi~~L~~a~~-~g~~liv 281 (296)
|+.-=+++.+|.||..++++|.+ .++-|+|
T Consensus 193 v~afqtrnP~Hr~H~~l~~~a~~~~~~~llv 223 (573)
T 1m8p_A 193 VVAFQTRNPMHRAHRELTVRAARSRQANVLI 223 (573)
T ss_dssp EEEECCSSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEeeCCCcchhhHHHHHHHHHhcCCcEEE
Confidence 45578899999999999998874 4776555
No 77
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=22.30 E-value=3.9e+02 Score=23.62 Aligned_cols=65 Identities=14% Similarity=0.052 Sum_probs=36.4
Q ss_pred CCCCHHHHHHHHHhcC-CccEEEEcCCCCccHHHHHH--HHHhcCccEEEEcCCCCcC-CCCCchHHHH
Q 022469 98 PVTPLHERMIMVNAVK-WVDEVISDAPYAITKDFMKK--LFDEYNIDYIIHGDDPCVL-PDGTDAYELA 162 (296)
Q Consensus 98 pi~s~eER~~~l~~~k-~VD~Vv~~~py~~t~efl~~--ll~~~~~d~VV~GdD~~fg-~~g~d~y~~l 162 (296)
+.+|.+||.++++... -++.|+.+.--.-+.+-++. ..++.++|.+.+-.-+.+. +...+.|+..
T Consensus 47 ~~Ls~eEr~~v~~~~~~~~~gviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f 115 (293)
T 1w3i_A 47 PSLSPEEKLENLKAVYDVTNKIIFQVGGLNLDDAIRLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYF 115 (293)
T ss_dssp GGSCHHHHHHHHHHHHTTCSCEEEECCCSCHHHHHHHHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHH
T ss_pred hhCCHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHH
Confidence 5678888888887632 23335554332223444432 3455788888777766655 4434444433
No 78
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=21.68 E-value=4.2e+02 Score=23.37 Aligned_cols=89 Identities=13% Similarity=0.023 Sum_probs=47.9
Q ss_pred HHHHHHHHHHhc-CeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHhcC-CccEEEEcCCCCccHHHHHH--HHHhcCccE
Q 022469 67 HCNALRQARALG-DQLVVGVVSDAEIIANKGPPVTPLHERMIMVNAVK-WVDEVISDAPYAITKDFMKK--LFDEYNIDY 142 (296)
Q Consensus 67 H~~lL~qAk~lg-d~LiVgV~sD~~i~~~Kg~pi~s~eER~~~l~~~k-~VD~Vv~~~py~~t~efl~~--ll~~~~~d~ 142 (296)
=.++++...+.| +-+++.=++-| -+.+|.+||.++++... .++.|+.+.--.-+.+-++. ..++.++|.
T Consensus 22 l~~lv~~li~~Gv~gl~v~GtTGE-------~~~Ls~eEr~~v~~~~~~~~~gViaGvg~~~t~~ai~la~~A~~~Gada 94 (288)
T 2nuw_A 22 LKTHAKNLLEKGIDAIFVNGTTGL-------GPALSKDEKRQNLNALYDVTHKLIFQVGSLNLNDVMELVKFSNEMDILG 94 (288)
T ss_dssp HHHHHHHHHHTTCCEEEETSTTTT-------GGGSCHHHHHHHHHHHTTTCSCEEEECCCSCHHHHHHHHHHHHTSCCSE
T ss_pred HHHHHHHHHHcCCCEEEECccccC-------hhhCCHHHHHHHHHHHHHHhCCeEEeeCCCCHHHHHHHHHHHHhcCCCE
Confidence 345566555555 43332212222 25688899999888742 23335555332223444432 345688998
Q ss_pred EEEcCCCCcC-CCCCchHHHH
Q 022469 143 IIHGDDPCVL-PDGTDAYELA 162 (296)
Q Consensus 143 VV~GdD~~fg-~~g~d~y~~l 162 (296)
+.+-.-+.+. +...+.|+..
T Consensus 95 vlv~~P~y~~~~s~~~l~~~f 115 (288)
T 2nuw_A 95 VSSHSPYYFPRLPEKFLAKYY 115 (288)
T ss_dssp EEECCCCSSCSCCHHHHHHHH
T ss_pred EEEcCCcCCCCCCHHHHHHHH
Confidence 8888766655 4434444433
Done!