Citrus Sinensis ID: 022471

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290------
Protein Sequence
MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSPSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVCYHIMT
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEEcccccHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHcccccccEEEEcccccHHHHHHHHHHccccEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccEEEEEcccccccccccccccccccccccccccccccccccccccccccEEEEEcc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHccccHHHHHHHHHccccccEEEEcccccHHHHHHHHHHccccEEEEccccccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEHHHHcccccccEcccccccccccccHHHHHHHHHHHHHHcccccEEEEEEEEcccccccccccccccccccccccccHHHHHHHHHccccccEEEccccc
Coil and Loop (DISEMBL)
mlnfgrartqqrqtrptsfggldyadpkrksnfAGKFILAAALTALCIFLlkqsptfsspspfsqheegVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVdnlsrgnigAVKVLQelfpepgrlQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVgestldplkyyhnitsNTLVVLESMARhgvdtliysstcatygepekmpiteetpqapinpygkAKKMAEDIILDFSKNSDMAVMILRYFNvigsdpegrlgeaprpelrehgrisgacFDAARGIIAGLKVCYHIMT
Flexible Loop (DISEMBL)
mlnfgrartqqrqtrptsfggldyadPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSPSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPekmpiteetpqapiNPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVCYHIMT
Low Complexity Region (SEG)
MLNFGRArtqqrqtrptSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQsptfsspspfsQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVCYHIMT
Disordered region (IsUnstruct)
*******************************NFAGKFILAAALTALCIFLLKQ***************GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYG************************MAEDIILDFSKNSDMAVMILRYFNVIG******************GRISGACFDAARGIIAGLKVCYHI**
Disordered Region (DISOPRED)
**************************PKRKSNFAGKFILAAALTALCIFLL********************HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVCYHIMT
Disordered Region (DISEMBL)
****************TSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTF**********EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVCYHIMT
Disordered Region (DISPRO)
**********************DYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSPSPFSQ**EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVCYHI**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSPSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVCYHIMT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	296	2.2.26 [Sep-21-2011]
Q9SA77	419	UDP-arabinose 4-epimerase	yes	no	0.979	0.692	0.858	1e-149
Q9SUN3	411	Probable UDP-arabinose 4-	no	no	0.976	0.703	0.844	1e-144
O64749	417	Putative UDP-arabinose 4-	no	no	0.976	0.693	0.848	1e-144
Q8H0B6	391	Probable UDP-arabinose 4-	yes	no	0.908	0.687	0.832	1e-131
Q8H0B2	406	Probable UDP-arabinose 4-	no	no	0.956	0.697	0.786	1e-130
Q8H930	421	Probable UDP-arabinose 4-	no	no	0.979	0.688	0.782	1e-130
Q9FI17	436	Putative UDP-arabinose 4-	no	no	0.979	0.665	0.742	1e-123
Q9SN58	351	UDP-glucose 4-epimerase 2	no	no	0.652	0.549	0.456	1e-43
P55180	339	UDP-glucose 4-epimerase O	yes	no	0.641	0.560	0.445	7e-43
Q9T0A7	350	UDP-glucose 4-epimerase 3	no	no	0.645	0.545	0.450	2e-42

>sp|Q9SA77|ARAE1_ARATH UDP-arabinose 4-epimerase 1 OS=Arabidopsis thaliana GN=MUR4 PE=1 SV=1

 Score =  528 bits (1360), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 249/290 (85%), Positives = 270/290 (93%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           M +FGRAR+Q RQ R  S GGLDYADPK+K+N+ GK +L A+LTALCIF+LKQSPTF++P
Sbjct: 1   MFSFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           S FS+HE GVTHVLVTGGAGYIGSHAALRLLK+SYRVTIVDNLSRGN+ AV++LQELFPE
Sbjct: 61  SVFSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPE 120

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLGDAKAVNK F+ENAFDAVMHFAAVAYVGEST  PLKYYHNITSNTLVVL
Sbjct: 121 PGRLQFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVL 180

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           E+MA HGV TLIYSSTCATYGEP+ MPITEETPQ PINPYGKAKKMAEDIILDFSKNSDM
Sbjct: 181 ETMAAHGVKTLIYSSTCATYGEPDIMPITEETPQVPINPYGKAKKMAEDIILDFSKNSDM 240

Query: 241 AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKV 290
           AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGI+ GL++
Sbjct: 241 AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIMPGLQI 290

Acts as a UDP-D-xylose 4-epimerase but lacks both UDP-D-glucose and UDP-D-glucuronic acid 4-epimerase activities in vitro.
Arabidopsis thaliana (taxid: 3702)
EC: 5EC: .EC: 1EC: .EC: 3EC: .EC: 5

>sp|Q9SUN3|ARAE3_ARATH Probable UDP-arabinose 4-epimerase 3 OS=Arabidopsis thaliana GN=At4g20460 PE=2 SV=3

 Score =  512 bits (1319), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 245/290 (84%), Positives = 266/290 (91%), Gaps = 1/290 (0%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           ML+F RAR+Q R TRP   GG++Y +PKRKSN  GK IL  +LTALCIF+LK +P+F+SP
Sbjct: 1   MLSFSRARSQGRNTRPLG-GGMEYLEPKRKSNVMGKIILVVSLTALCIFMLKHAPSFTSP 59

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           + FS+ EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN+GAVKVLQ LFPE
Sbjct: 60  TAFSRSEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNLGAVKVLQGLFPE 119

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLGDAKAV+K FSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL
Sbjct: 120 PGRLQFIYADLGDAKAVDKIFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 179

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           E++ARH V  LIYSSTCATYGEP+KMPI E TPQ PINPYGKAKKMAED+ILDFSKNSDM
Sbjct: 180 EAVARHKVKKLIYSSTCATYGEPDKMPIVEVTPQVPINPYGKAKKMAEDMILDFSKNSDM 239

Query: 241 AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKV 290
           AVMILRYFNVIGSDPEGRLGEAP+PELREHGRISGACFDAARG+I GL+V
Sbjct: 240 AVMILRYFNVIGSDPEGRLGEAPKPELREHGRISGACFDAARGVIPGLQV 289

Arabidopsis thaliana (taxid: 3702)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 5

>sp|O64749|ARAE2_ARATH Putative UDP-arabinose 4-epimerase 2 OS=Arabidopsis thaliana GN=At2g34850 PE=2 SV=3

 Score =  511 bits (1317), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 246/290 (84%), Positives = 262/290 (90%), Gaps = 1/290 (0%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           MLN GRART  RQ R  SF GLD+ADPK+ +N+ GK +L   LTA+CI LL QSPTF++P
Sbjct: 1   MLNLGRARTG-RQNRSMSFEGLDFADPKKNNNYMGKIVLVMTLTAMCILLLNQSPTFNTP 59

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           S FS+ E GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN+GAVK+LQ+LFPE
Sbjct: 60  SVFSRSEPGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNLGAVKILQQLFPE 119

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PG+LQFIYADLGDA AVNK FSENAFDAVMHFAAVAYVGEST  PLKYYHNITSNTLVVL
Sbjct: 120 PGKLQFIYADLGDANAVNKIFSENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVL 179

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           E+MA HGV TLIYSSTCATYGEPEKMPITEETPQ PINPYGKAKKMAEDIILDFSKNS M
Sbjct: 180 ETMAAHGVKTLIYSSTCATYGEPEKMPITEETPQVPINPYGKAKKMAEDIILDFSKNSIM 239

Query: 241 AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKV 290
           AVMILRYFNVIGSDPEGRLGEAPRPEL EHGRISGACFDAARGII GL++
Sbjct: 240 AVMILRYFNVIGSDPEGRLGEAPRPELSEHGRISGACFDAARGIIPGLQI 289

Arabidopsis thaliana (taxid: 3702)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 5

>sp|Q8H0B6|ARAE2_ORYSJ Probable UDP-arabinose 4-epimerase 2 OS=Oryza sativa subsp. japonica GN=UEL-2 PE=2 SV=1

 Score =  468 bits (1204), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 224/269 (83%), Positives = 242/269 (89%)

Query: 22  LDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSPSPFSQHEEGVTHVLVTGGAGY 81
           +D+ D +RK N  GKF +A ALT +CI +LKQSP F+S S FS+HE GVTHVLVTGGAGY
Sbjct: 1   MDFGDSRRKPNVVGKFTVAVALTVMCIIVLKQSPGFTSTSVFSRHEIGVTHVLVTGGAGY 60

Query: 82  IGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFF 141
           IGSHA LRLL+D+YRVTIVDNLSRGN+GAV+VLQ LFPEPGRLQFIYADLGDAKAVNK F
Sbjct: 61  IGSHATLRLLRDNYRVTIVDNLSRGNMGAVRVLQRLFPEPGRLQFIYADLGDAKAVNKIF 120

Query: 142 SENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYG 201
           SENAFDAVMHFAAVAYVGESTL+PL+YYHNITSNTL VLE+MA + V TLIYSSTCATYG
Sbjct: 121 SENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLTVLEAMAAYNVKTLIYSSTCATYG 180

Query: 202 EPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGE 261
           EP+ MPITE TPQ PINPYGKAKKMAEDIILDFSK S+MAVMILRYFNVIGSDP GRLGE
Sbjct: 181 EPDTMPITEATPQNPINPYGKAKKMAEDIILDFSKRSEMAVMILRYFNVIGSDPGGRLGE 240

Query: 262 APRPELREHGRISGACFDAARGIIAGLKV 290
           APRPELREHGRISGACFDAA GII GLKV
Sbjct: 241 APRPELREHGRISGACFDAALGIIPGLKV 269

Oryza sativa subsp. japonica (taxid: 39947)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 5

>sp|Q8H0B2|ARAE3_ORYSJ Probable UDP-arabinose 4-epimerase 3 OS=Oryza sativa subsp. japonica GN=UEL-3 PE=2 SV=1

 Score =  466 bits (1198), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 229/291 (78%), Positives = 248/291 (85%), Gaps = 8/291 (2%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           M+   R  +Q R       GG++Y D +RK +  GK I A  LT LCIF+LKQSP F   
Sbjct: 1   MIPLNRRASQTR-------GGMEYFDARRKPHNVGKVIAALVLTTLCIFILKQSPGFGGS 53

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           S FS+HE GVTHVLVTGGAGYIGSHA+LRLLKD+YRVTIVDNLSRGN+GAVKVLQELFP+
Sbjct: 54  SVFSRHEPGVTHVLVTGGAGYIGSHASLRLLKDNYRVTIVDNLSRGNMGAVKVLQELFPQ 113

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLGD K VNK F+ENAFDAVMHFAAVAYVGESTL+PL+YYHNITSNTL++L
Sbjct: 114 PGRLQFIYADLGDQKTVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLLIL 173

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK-NSD 239
           E+MA HGV TLIYSSTCATYGEPEKMPI E T Q PINPYGKAKKMAEDIILDF+K   D
Sbjct: 174 EAMASHGVKTLIYSSTCATYGEPEKMPIVETTRQLPINPYGKAKKMAEDIILDFTKGRKD 233

Query: 240 MAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKV 290
           MAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAA GII GLKV
Sbjct: 234 MAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKV 284

Oryza sativa subsp. japonica (taxid: 39947)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 5

>sp|Q8H930|ARAE1_ORYSJ Probable UDP-arabinose 4-epimerase 1 OS=Oryza sativa subsp. japonica GN=UEL-1 PE=2 SV=2

 Score =  463 bits (1192), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 230/294 (78%), Positives = 251/294 (85%), Gaps = 4/294 (1%)

Query: 1   MLNFGRARTQQRQTRPTSF-GGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFS- 58
           ML   R R QQR  R   F   +D++DPKRK  +  K ++ A LTA+C+ +L Q P    
Sbjct: 1   MLPTNRNRPQQRPARSWYFISDMDFSDPKRKPRYLSKILMVALLTAMCVVMLTQPPCHRR 60

Query: 59  SPSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELF 118
           +PS FS HE GVTHVLVTGGAGYIGSHAALRLLKDS+RVTIVDNLSRGN+GA+KVLQ LF
Sbjct: 61  TPSVFSIHEPGVTHVLVTGGAGYIGSHAALRLLKDSFRVTIVDNLSRGNMGAIKVLQNLF 120

Query: 119 PEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLV 178
            EPGRLQFIYADLGD KAVN+ F+ENAFDAVMHFAAVAYVGESTL+PL+YYHNITSNTLV
Sbjct: 121 SEPGRLQFIYADLGDPKAVNRIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLV 180

Query: 179 VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN- 237
           VLE+MA H V TLIYSSTCATYGEPEKMPITE TPQ PINPYGKAKKMAEDIILDFSK+ 
Sbjct: 181 VLEAMAAHNVRTLIYSSTCATYGEPEKMPITEGTPQFPINPYGKAKKMAEDIILDFSKSK 240

Query: 238 -SDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKV 290
            +DMAVMILRYFNVIGSDPEGRLGEAP+PELREHGRISGACFDAA GII GLKV
Sbjct: 241 KADMAVMILRYFNVIGSDPEGRLGEAPKPELREHGRISGACFDAALGIIPGLKV 294

Oryza sativa subsp. japonica (taxid: 39947)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 5

>sp|Q9FI17|ARAE4_ARATH Putative UDP-arabinose 4-epimerase 4 OS=Arabidopsis thaliana GN=At5g44480 PE=3 SV=1

 Score =  440 bits (1132), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 233/314 (74%), Positives = 251/314 (79%), Gaps = 24/314 (7%)

Query: 1   MLNFGRARTQQRQTRPTSFGG------------------------LDYADPKRKSNFAGK 36
           MLN    RTQ+R  RP S GG                        +D  +PK K+N  GK
Sbjct: 1   MLNSSGVRTQRRSPRPLSLGGRKIITPTKFAYDHHNPDKVLDFVEMDCLEPKTKNNLTGK 60

Query: 37  FILAAALTALCIFLLKQSPTFSSPSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYR 96
            +L A+L  L I ++ QS +F+SPS FSQ EEGVTHVLVTGGAGYIGSHAALRLL+DSYR
Sbjct: 61  LLLVASLLILAIIVISQSSSFTSPSAFSQREEGVTHVLVTGGAGYIGSHAALRLLRDSYR 120

Query: 97  VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVA 156
           VTIVDNLSRGN+GAVK LQ+LFP+ GRLQFIYADLGD  AV K FSENAFDAVMHFAAVA
Sbjct: 121 VTIVDNLSRGNLGAVKTLQQLFPQTGRLQFIYADLGDPLAVEKIFSENAFDAVMHFAAVA 180

Query: 157 YVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP 216
           YVGESTL PLKYYHNITSNTL VLE+MARH V  LIYSSTCATYGEPEKMPITE+TPQ P
Sbjct: 181 YVGESTLYPLKYYHNITSNTLGVLEAMARHKVKKLIYSSTCATYGEPEKMPITEDTPQVP 240

Query: 217 INPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGA 276
           INPYGKAKKMAED+ILDFSKNSDMAVMILRYFNVIGSDP GRLGEAPRPELRE GRISGA
Sbjct: 241 INPYGKAKKMAEDMILDFSKNSDMAVMILRYFNVIGSDPGGRLGEAPRPELREQGRISGA 300

Query: 277 CFDAARGIIAGLKV 290
           CFDAARG I GL+V
Sbjct: 301 CFDAARGFIPGLQV 314

Arabidopsis thaliana (taxid: 3702)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 5

>sp|Q9SN58|GALE2_ARATH UDP-glucose 4-epimerase 2 OS=Arabidopsis thaliana GN=At4g10960 PE=2 SV=3

 Score =  177 bits (448), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 89/195 (45%), Positives = 126/195 (64%), Gaps = 2/195 (1%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYAD 130
           +VLV+GGAGYIGSH  L+LL   Y V +VDNL   +  +++ +++L  E G RL F   D
Sbjct: 5   NVLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVKKLAAEHGERLSFHQVD 64

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           L D  A+ K FSE  FDAV+HFA +  VGES   PL YY+N    T+ +LE MA+HG   
Sbjct: 65  LRDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQHGCKN 124

Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILD-FSKNSDMAVMILRYFN 249
           L++SS+   YG P+++P TEE P + +NPYG+ K   E+I  D +  + +  +++LRYFN
Sbjct: 125 LVFSSSATVYGSPKEVPCTEEFPISALNPYGRTKLFIEEICRDVYGSDPEWKIILLRYFN 184

Query: 250 VIGSDPEGRLGEAPR 264
            +G+ P G +GE PR
Sbjct: 185 PVGAHPSGDIGEDPR 199

Arabidopsis thaliana (taxid: 3702)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|P55180|GALE_BACSU UDP-glucose 4-epimerase OS=Bacillus subtilis (strain 168) GN=galE PE=3 SV=1

 Score =  174 bits (441), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 86/193 (44%), Positives = 124/193 (64%), Gaps = 3/193 (1%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTGGAGYIGSH  + LL   Y + ++DNLS  +  A+  ++E+  +   L F  ADL 
Sbjct: 3   ILVTGGAGYIGSHTCVELLNSGYEIVVLDNLSNSSAEALNRVKEITGK--DLTFYEADLL 60

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D +AV+  F+EN  +AV+HFA +  VGES   PLKYYHN  + T ++ E+M ++GV  ++
Sbjct: 61  DREAVDSVFAENEIEAVIHFAGLKAVGESVAIPLKYYHNNLTGTFILCEAMEKYGVKKIV 120

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDF-SKNSDMAVMILRYFNVI 251
           +SS+   YG PE  PITE+ P    NPYG+ K M E I+ D  + +++ +V +LRYFN  
Sbjct: 121 FSSSATVYGVPETSPITEDFPLGATNPYGQTKLMLEQILRDLHTADNEWSVALLRYFNPF 180

Query: 252 GSDPEGRLGEAPR 264
           G+ P GR+GE P 
Sbjct: 181 GAHPSGRIGEDPN 193

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|Q9T0A7|GALE3_ARATH UDP-glucose 4-epimerase 3 OS=Arabidopsis thaliana GN=At4g23920 PE=2 SV=1

 Score =  172 bits (437), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 87/193 (45%), Positives = 124/193 (64%), Gaps = 2/193 (1%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
           VLVTGGAGYIGSH  L+LL+  Y   +VDN    +  +++ +++L  E G RL F   DL
Sbjct: 5   VLVTGGAGYIGSHTVLQLLEGGYSAVVVDNYDNSSAASLQRVKKLAGENGNRLSFHQVDL 64

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            D  A+ K FSE  FDAV+HFA +  VGES   PL YY+N    T+ +LE MA++G   L
Sbjct: 65  RDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQYGCKNL 124

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNV 250
           ++SS+   YG P+++P TEE+P +  NPYG+ K   E+I  D  + +S+  +++LRYFN 
Sbjct: 125 VFSSSATVYGWPKEVPCTEESPISATNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNP 184

Query: 251 IGSDPEGRLGEAP 263
           +G+ P G +GE P
Sbjct: 185 VGAHPSGYIGEDP 197

Arabidopsis thaliana (taxid: 3702)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	296
255578061	417	UDP-glucose 4-epimerase, putative [Ricin	0.979	0.695	0.886	1e-151
449435556	417	PREDICTED: UDP-arabinose 4-epimerase 1-l	0.979	0.695	0.879	1e-149
297846004	418	hypothetical protein ARALYDRAFT_890616 [	0.979	0.693	0.865	1e-149
22329866	419	UDP-arabinose 4-epimerase [Arabidopsis t	0.979	0.692	0.858	1e-147
225444161	418	PREDICTED: UDP-arabinose 4-epimerase 1 [	0.979	0.693	0.862	1e-147
224117864	417	predicted protein [Populus trichocarpa]	0.979	0.695	0.868	1e-147
24417398	419	unknown [Arabidopsis thaliana]	0.979	0.692	0.855	1e-146
145324086	418	UDP-arabinose 4-epimerase [Arabidopsis t	0.976	0.691	0.858	1e-146
211906524	413	UDP-D-xylose 4-epimerase [Gossypium hirs	0.979	0.702	0.855	1e-146
224061581	417	predicted protein [Populus trichocarpa]	0.979	0.695	0.848	1e-145

>gi|255578061|ref|XP_002529901.1| UDP-glucose 4-epimerase, putative [Ricinus communis] gi|223530628|gb|EEF32504.1| UDP-glucose 4-epimerase, putative [Ricinus communis]

 Score =  539 bits (1389), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 257/290 (88%), Positives = 269/290 (92%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           MLNFGRAR QQR  R     GLDYADPKRKSN  GK ILAAALTALCI +LKQSPTF++P
Sbjct: 1   MLNFGRARNQQRTNRSMPLAGLDYADPKRKSNVVGKIILAAALTALCIIMLKQSPTFNTP 60

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           SPFS HE+GV HVLVTGGAGYIGSHA+LRLLKD YRVTIVDNLSRGN+GAVKVLQELFPE
Sbjct: 61  SPFSLHEDGVVHVLVTGGAGYIGSHASLRLLKDGYRVTIVDNLSRGNLGAVKVLQELFPE 120

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLG++K+VNK FSENAFDAVMHFAAVAYVGEST+DPLKYYHNITSNTLVVL
Sbjct: 121 PGRLQFIYADLGNSKSVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVL 180

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           ESMA H V TLIYSSTCATYGEPEKMPITE+T Q PINPYGKAKKMAEDIILDFSKNSDM
Sbjct: 181 ESMAAHDVKTLIYSSTCATYGEPEKMPITEDTAQVPINPYGKAKKMAEDIILDFSKNSDM 240

Query: 241 AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKV 290
           AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII+GLKV
Sbjct: 241 AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIISGLKV 290

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449435556|ref|XP_004135561.1| PREDICTED: UDP-arabinose 4-epimerase 1-like [Cucumis sativus]

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 255/290 (87%), Positives = 270/290 (93%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           ML+FGR+R Q R  R  SFGG+DY DPKRK+NF GK ILAA+LTA+CI +LKQSP FS+P
Sbjct: 1   MLSFGRSRNQSRFGRSVSFGGMDYPDPKRKNNFVGKIILAASLTAICIVMLKQSPNFSTP 60

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           +PF+ H+ GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN+GAVKVLQELFPE
Sbjct: 61  TPFASHQLGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNLGAVKVLQELFPE 120

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
            GRLQFIYADLGDAK+VNK FSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTL VL
Sbjct: 121 YGRLQFIYADLGDAKSVNKIFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLTVL 180

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           ESMA HGV TLIYSSTCATYGEPEKMPITEET QAPINPYGKAKKMAE+IILDFSKNS M
Sbjct: 181 ESMAAHGVKTLIYSSTCATYGEPEKMPITEETSQAPINPYGKAKKMAEEIILDFSKNSKM 240

Query: 241 AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKV 290
           AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII+GLKV
Sbjct: 241 AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIISGLKV 290

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297846004|ref|XP_002890883.1| hypothetical protein ARALYDRAFT_890616 [Arabidopsis lyrata subsp. lyrata] gi|297336725|gb|EFH67142.1| hypothetical protein ARALYDRAFT_890616 [Arabidopsis lyrata subsp. lyrata]

 Score =  532 bits (1370), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 251/290 (86%), Positives = 271/290 (93%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           M NFGRAR+Q RQ R  S GGLDYADPK+K+N+ GK +L A+LTALCIF+LKQSPTF++P
Sbjct: 1   MFNFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           S FS+HE GVTHVLVTGGAGYIGSHAALRLLK+SYRVTIVDNLSRGN+GAVK+LQELFPE
Sbjct: 61  SVFSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLGAVKILQELFPE 120

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLGDAKAVNK F+ENAFDAVMHFAAVAYVGEST  PLKYYHNITSNTLVVL
Sbjct: 121 PGRLQFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVL 180

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           E+MA HGV TLIYSSTCATYGEP+ MPITEETPQ PINPYGKAKKMAEDIILDFSKNS+M
Sbjct: 181 ETMAAHGVKTLIYSSTCATYGEPDTMPITEETPQVPINPYGKAKKMAEDIILDFSKNSNM 240

Query: 241 AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKV 290
           AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGI+ GL++
Sbjct: 241 AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIMPGLQI 290

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22329866|ref|NP_174350.2| UDP-arabinose 4-epimerase [Arabidopsis thaliana] gi|79318985|ref|NP_001031118.1| UDP-arabinose 4-epimerase [Arabidopsis thaliana] gi|75313130|sp|Q9SA77.1|ARAE1_ARATH RecName: Full=UDP-arabinose 4-epimerase 1; AltName: Full=UDP-D-xylose 4-epimerase 1 gi|4587518|gb|AAD25749.1|AC007060_7 Strong similarity to F19I3.8 gi|3033381 putative UDP-galactose-4-epimerase from Arabidopsis thaliana BAC gb|AC004238 and is a member of PF|01370 the NAD dependent epimerase/dehydratase family. EST gb|AA597338 comes from this gene [Arabidopsis thaliana] gi|13272475|gb|AAK17176.1|AF325108_1 unknown protein [Arabidopsis thaliana] gi|18086329|gb|AAL57628.1| At1g30620/T5I8_7 [Arabidopsis thaliana] gi|27363222|gb|AAO11530.1| At1g30620/T5I8_7 [Arabidopsis thaliana] gi|28395529|gb|AAO39213.1| UDP-D-xylose 4-epimerase [Arabidopsis thaliana] gi|222423784|dbj|BAH19858.1| AT1G30620 [Arabidopsis thaliana] gi|332193130|gb|AEE31251.1| UDP-arabinose 4-epimerase [Arabidopsis thaliana] gi|332193131|gb|AEE31252.1| UDP-arabinose 4-epimerase [Arabidopsis thaliana]

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 249/290 (85%), Positives = 270/290 (93%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           M +FGRAR+Q RQ R  S GGLDYADPK+K+N+ GK +L A+LTALCIF+LKQSPTF++P
Sbjct: 1   MFSFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           S FS+HE GVTHVLVTGGAGYIGSHAALRLLK+SYRVTIVDNLSRGN+ AV++LQELFPE
Sbjct: 61  SVFSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPE 120

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLGDAKAVNK F+ENAFDAVMHFAAVAYVGEST  PLKYYHNITSNTLVVL
Sbjct: 121 PGRLQFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVL 180

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           E+MA HGV TLIYSSTCATYGEP+ MPITEETPQ PINPYGKAKKMAEDIILDFSKNSDM
Sbjct: 181 ETMAAHGVKTLIYSSTCATYGEPDIMPITEETPQVPINPYGKAKKMAEDIILDFSKNSDM 240

Query: 241 AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKV 290
           AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGI+ GL++
Sbjct: 241 AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIMPGLQI 290

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225444161|ref|XP_002270765.1| PREDICTED: UDP-arabinose 4-epimerase 1 [Vitis vinifera] gi|297740899|emb|CBI31081.3| unnamed protein product [Vitis vinifera]

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 250/290 (86%), Positives = 269/290 (92%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           MLNF R+R Q R +R   FGG++YADPKRKSN  GK +LAA LTALCI +LKQS  F++P
Sbjct: 1   MLNFTRSRNQPRPSRSMPFGGMEYADPKRKSNVVGKILLAATLTALCILMLKQSSNFNTP 60

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           SPFS+HE GVTHVLVTGGAGYIGSHAALRLLKDS+RVTIVDNLSRGN+GA+KVLQE FPE
Sbjct: 61  SPFSRHEPGVTHVLVTGGAGYIGSHAALRLLKDSHRVTIVDNLSRGNLGAIKVLQEQFPE 120

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLGDAKAVNK FSENAFDAVMHFAAVAYVGESTL+PL+YYHNITSNTLVVL
Sbjct: 121 PGRLQFIYADLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVVL 180

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           E+MA HGV+TLIYSSTCATYGEPEKMPITE+TPQ PINPYGKAKKMAEDIILDFSKNS+M
Sbjct: 181 EAMAAHGVNTLIYSSTCATYGEPEKMPITEQTPQVPINPYGKAKKMAEDIILDFSKNSEM 240

Query: 241 AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKV 290
           AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAA G+I GLKV
Sbjct: 241 AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAASGVIPGLKV 290

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117864|ref|XP_002317687.1| predicted protein [Populus trichocarpa] gi|222860752|gb|EEE98299.1| predicted protein [Populus trichocarpa]

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 252/290 (86%), Positives = 264/290 (91%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           MLNFGR R Q R  R  S GG+DY+DPKRK+N  GK +LAA LTALCI +LKQSPTF SP
Sbjct: 1   MLNFGRTRAQTRSNRSISLGGMDYSDPKRKNNVVGKILLAATLTALCIIMLKQSPTFYSP 60

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           SPFS HEEGV HVLVTGGAGYIGSHAALRLLKD YRVTIVDNLSRGNIGAVKVLQELFPE
Sbjct: 61  SPFSLHEEGVIHVLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNIGAVKVLQELFPE 120

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLGD K VN  FS+NAFDAVMHFAAVAYVGEST++PLKYYHNITSNTLVVL
Sbjct: 121 PGRLQFIYADLGDPKTVNIIFSQNAFDAVMHFAAVAYVGESTMEPLKYYHNITSNTLVVL 180

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           E+MA + V TLIYSSTCATYGEPEKMPITE TPQ PINPYGKAKKMAEDIILDFSKNSDM
Sbjct: 181 EAMAANDVKTLIYSSTCATYGEPEKMPITEVTPQVPINPYGKAKKMAEDIILDFSKNSDM 240

Query: 241 AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKV 290
           A+MILRYFNVIGSDP+GRLGEAPRPELREHGRISGACFDAARGIIAGLKV
Sbjct: 241 AIMILRYFNVIGSDPDGRLGEAPRPELREHGRISGACFDAARGIIAGLKV 290

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|24417398|gb|AAN60309.1| unknown [Arabidopsis thaliana]

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 248/290 (85%), Positives = 269/290 (92%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           M +FGRAR+Q RQ R  S GGLDYADPK+K+N+ GK +L A+LTALCIF+LKQSPTF++P
Sbjct: 1   MFSFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           S FS+HE GVTHVLVTGGAGYIGSHAALRLLK+SYRVTIVDNLSRGN+ AV++LQELFPE
Sbjct: 61  SVFSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPE 120

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLGDAKAVNK F+ENAFDAVMHFAA AYVGEST  PLKYYHNITSNTLVVL
Sbjct: 121 PGRLQFIYADLGDAKAVNKIFTENAFDAVMHFAAGAYVGESTQFPLKYYHNITSNTLVVL 180

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           E+MA HGV TLIYSSTCATYGEP+ MPITEETPQ PINPYGKAKKMAEDIILDFSKNSDM
Sbjct: 181 ETMAAHGVKTLIYSSTCATYGEPDIMPITEETPQVPINPYGKAKKMAEDIILDFSKNSDM 240

Query: 241 AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKV 290
           AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGI+ GL++
Sbjct: 241 AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIMPGLQI 290

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145324086|ref|NP_001077632.1| UDP-arabinose 4-epimerase [Arabidopsis thaliana] gi|332193132|gb|AEE31253.1| UDP-arabinose 4-epimerase [Arabidopsis thaliana]

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 249/290 (85%), Positives = 270/290 (93%), Gaps = 1/290 (0%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           M +FGRAR+Q RQ R  S GGLDYADPK+K+N+ GK +L A+LTALCIF+LKQSPTF++P
Sbjct: 1   MFSFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           S FS+HE GVTHVLVTGGAGYIGSHAALRLLK+SYRVTIVDNLSRGN+ AV++LQELFPE
Sbjct: 61  S-FSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPE 119

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLGDAKAVNK F+ENAFDAVMHFAAVAYVGEST  PLKYYHNITSNTLVVL
Sbjct: 120 PGRLQFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVL 179

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           E+MA HGV TLIYSSTCATYGEP+ MPITEETPQ PINPYGKAKKMAEDIILDFSKNSDM
Sbjct: 180 ETMAAHGVKTLIYSSTCATYGEPDIMPITEETPQVPINPYGKAKKMAEDIILDFSKNSDM 239

Query: 241 AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKV 290
           AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGI+ GL++
Sbjct: 240 AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIMPGLQI 289

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|211906524|gb|ACJ11755.1| UDP-D-xylose 4-epimerase [Gossypium hirsutum]

 Score =  523 bits (1348), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 248/290 (85%), Positives = 265/290 (91%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           MLNF R R+Q R TR     G++Y DPKRKSNF GK ++AA LTALCI +LKQSP F++ 
Sbjct: 1   MLNFARGRSQPRSTRSMPLSGMEYPDPKRKSNFVGKILMAATLTALCIIMLKQSPNFNTR 60

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           S FS+HEEGV HVLVTGGAGYIGSHAALRLLK+SYRVTIVDNLSRGN+GAVKVLQ+LFPE
Sbjct: 61  SRFSEHEEGVIHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNMGAVKVLQKLFPE 120

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PG+LQF+YADLGD KAVNK FSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLV+L
Sbjct: 121 PGQLQFVYADLGDLKAVNKIFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVIL 180

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           ESMA H V TLIYSSTCATYGEPEKMPITEETPQ PINPYGKAKKMAEDIILD+SKNSDM
Sbjct: 181 ESMAAHDVRTLIYSSTCATYGEPEKMPITEETPQVPINPYGKAKKMAEDIILDYSKNSDM 240

Query: 241 AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKV 290
           AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARG+I GLKV
Sbjct: 241 AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGVIPGLKV 290

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224061581|ref|XP_002300551.1| predicted protein [Populus trichocarpa] gi|222847809|gb|EEE85356.1| predicted protein [Populus trichocarpa]

 Score =  519 bits (1337), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 246/290 (84%), Positives = 266/290 (91%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           ML+FGR RTQ R  R  S GG+D++DPKRK+N  GK +LAA+LTA+CI +LKQSPTF+SP
Sbjct: 1   MLSFGRTRTQPRSNRSMSLGGMDFSDPKRKNNVVGKILLAASLTAVCIIMLKQSPTFNSP 60

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           SPFS  E+GV HVLVTGGAGYIGSHAALRLLKD YRVTIVDNLSRGN+GAVKVLQELFPE
Sbjct: 61  SPFSLREDGVIHVLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNLGAVKVLQELFPE 120

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLG+ K VN  FS+NAFDAVMHFAAVAYVGEST+ PLKYYHNITSNTLVVL
Sbjct: 121 PGRLQFIYADLGEPKTVNSIFSQNAFDAVMHFAAVAYVGESTVYPLKYYHNITSNTLVVL 180

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           ESMA + V TLIYSSTCATYGEPEKMPITE+TPQ PINPYGKAKKMAEDIILDFSKNSDM
Sbjct: 181 ESMAANDVKTLIYSSTCATYGEPEKMPITEDTPQVPINPYGKAKKMAEDIILDFSKNSDM 240

Query: 241 AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKV 290
           A+MILRYFNVIGSDP+GRLGEAPRPELREHGRISGACFDAARGI+AGLKV
Sbjct: 241 AIMILRYFNVIGSDPDGRLGEAPRPELREHGRISGACFDAARGIVAGLKV 290

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	296
TAIR|locus:2204639	419	MUR4 "MURUS 4" [Arabidopsis th	0.979	0.692	0.813	8.9e-125
TAIR|locus:2163401	436	DUR "DEFECTIVE UGE IN ROOT" [A	0.918	0.623	0.790	3.3e-111
TAIR|locus:2123466	351	UGE5 "UDP-D-glucose/UDP-D-gala	0.652	0.549	0.456	1.5e-42
TAIR|locus:2014235	348	RHD1 "ROOT HAIR DEFECTIVE 1" [	0.655	0.557	0.433	3.6e-41
TAIR|locus:2138121	350	UGE2 "UDP-D-glucose/UDP-D-gala	0.645	0.545	0.450	5.9e-41
TIGR_CMR|BA_5700	338	BA_5700 "UDP-glucose 4-epimera	0.638	0.559	0.411	5.5e-38
TIGR_CMR|CJE_1273	328	CJE_1273 "UDP-glucose 4-epimer	0.645	0.582	0.431	1.9e-37
UNIPROTKB|Q9KLH0	338	VC_A0774 "UDP-glucose 4-epimer	0.641	0.562	0.404	3.9e-37
TIGR_CMR|VC_A0774	338	VC_A0774 "UDP-glucose 4-epimer	0.641	0.562	0.404	3.9e-37
DICTYBASE|DDB_G0275295	344	galE "UDP-glucose 4-epimerase"	0.641	0.552	0.393	1.3e-36

TAIR|locus:2204639 MUR4 "MURUS 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 1226 (436.6 bits), Expect = 8.9e-125, P = 8.9e-125
 Identities = 236/290 (81%), Positives = 254/290 (87%)

Query:     1 MLNFGRAXXXXXXXXXXSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQXXXXXXX 60
             M +FGRA          S GGLDYADPK+K+N+ GK +L A+LTALCIF+LKQ       
Sbjct:     1 MFSFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60

Query:    61 XXXXQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
                 +HE GVTHVLVTGGAGYIGSHAALRLLK+SYRVTIVDNLSRGN+ AV++LQELFPE
Sbjct:    61 SVFSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPE 120

Query:   121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
             PGRLQFIYADLGDAKAVNK F+ENAFDAVMHFAAVAYVGEST  PLKYYHNITSNTLVVL
Sbjct:   121 PGRLQFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVL 180

Query:   181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
             E+MA HGV TLIYSSTCATYGEP+ MPITEETPQ PINPYGKAKKMAEDIILDFSKNSDM
Sbjct:   181 ETMAAHGVKTLIYSSTCATYGEPDIMPITEETPQVPINPYGKAKKMAEDIILDFSKNSDM 240

Query:   241 AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKV 290
             AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGI+ GL++
Sbjct:   241 AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIMPGLQI 290

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0019567 "arabinose biosynthetic process" evidence=IMP

GO:0050373 "UDP-arabinose 4-epimerase activity" evidence=IDA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

GO:0052542 "defense response by callose deposition" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=IMP

TAIR|locus:2163401 DUR "DEFECTIVE UGE IN ROOT" [Arabidopsis thaliana (taxid:3702)]

 Score = 1098 (391.6 bits), Expect = 3.3e-111, P = 3.3e-111
 Identities = 215/272 (79%), Positives = 230/272 (84%)

Query:    19 FGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQXXXXXXXXXXXQHEEGVTHVLVTGG 78
             F  +D  +PK K+N  GK +L A+L  L I ++ Q           Q EEGVTHVLVTGG
Sbjct:    43 FVEMDCLEPKTKNNLTGKLLLVASLLILAIIVISQSSSFTSPSAFSQREEGVTHVLVTGG 102

Query:    79 AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVN 138
             AGYIGSHAALRLL+DSYRVTIVDNLSRGN+GAVK LQ+LFP+ GRLQFIYADLGD  AV 
Sbjct:   103 AGYIGSHAALRLLRDSYRVTIVDNLSRGNLGAVKTLQQLFPQTGRLQFIYADLGDPLAVE 162

Query:   139 KFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCA 198
             K FSENAFDAVMHFAAVAYVGESTL PLKYYHNITSNTL VLE+MARH V  LIYSSTCA
Sbjct:   163 KIFSENAFDAVMHFAAVAYVGESTLYPLKYYHNITSNTLGVLEAMARHKVKKLIYSSTCA 222

Query:   199 TYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGR 258
             TYGEPEKMPITE+TPQ PINPYGKAKKMAED+ILDFSKNSDMAVMILRYFNVIGSDP GR
Sbjct:   223 TYGEPEKMPITEDTPQVPINPYGKAKKMAEDMILDFSKNSDMAVMILRYFNVIGSDPGGR 282

Query:   259 LGEAPRPELREHGRISGACFDAARGIIAGLKV 290
             LGEAPRPELRE GRISGACFDAARG I GL+V
Sbjct:   283 LGEAPRPELREQGRISGACFDAARGFIPGLQV 314

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

TAIR|locus:2123466 UGE5 "UDP-D-glucose/UDP-D-galactose 4-epimerase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
 Identities = 89/195 (45%), Positives = 126/195 (64%)

Query:    72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYAD 130
             +VLV+GGAGYIGSH  L+LL   Y V +VDNL   +  +++ +++L  E G RL F   D
Sbjct:     5 NVLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVKKLAAEHGERLSFHQVD 64

Query:   131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
             L D  A+ K FSE  FDAV+HFA +  VGES   PL YY+N    T+ +LE MA+HG   
Sbjct:    65 LRDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQHGCKN 124

Query:   191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILD-FSKNSDMAVMILRYFN 249
             L++SS+   YG P+++P TEE P + +NPYG+ K   E+I  D +  + +  +++LRYFN
Sbjct:   125 LVFSSSATVYGSPKEVPCTEEFPISALNPYGRTKLFIEEICRDVYGSDPEWKIILLRYFN 184

Query:   250 VIGSDPEGRLGEAPR 264
              +G+ P G +GE PR
Sbjct:   185 PVGAHPSGDIGEDPR 199

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA;IDA

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0016857 "racemase and epimerase activity, acting on carbohydrates and derivatives" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IPI

TAIR|locus:2014235 RHD1 "ROOT HAIR DEFECTIVE 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
 Identities = 85/196 (43%), Positives = 126/196 (64%)

Query:    70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIY- 128
             V ++LVTGGAGYIGSH  L+LL   Y   ++DNL   ++ +++ +++L  + G+   ++ 
Sbjct:     2 VGNILVTGGAGYIGSHTVLQLLLGGYNTVVIDNLDNSSLVSIQRVKDLAGDHGQNLTVHQ 61

Query:   129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
              DL D  A+ K FSE  FDAVMHFA +  VGES   PL YY+N    T+ +LE MA HG 
Sbjct:    62 VDLRDKPALEKVFSETKFDAVMHFAGLKAVGESVAKPLLYYNNNLIATITLLEVMAAHGC 121

Query:   189 DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS-DMAVMILRY 247
               L++SS+   YG P+++P TEE+P + ++PYG+ K   EDI  D  +   +  +++LRY
Sbjct:   122 KKLVFSSSATVYGWPKEVPCTEESPLSGMSPYGRTKLFIEDICRDVQRGDPEWRIIMLRY 181

Query:   248 FNVIGSDPEGRLGEAP 263
             FN +G+ P GR+GE P
Sbjct:   182 FNPVGAHPSGRIGEDP 197

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA;IGI;IDA;TAS

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0010053 "root epidermal cell differentiation" evidence=IMP

GO:0009832 "plant-type cell wall biogenesis" evidence=TAS

GO:0009969 "xyloglucan biosynthetic process" evidence=IMP

GO:0010246 "rhamnogalacturonan I biosynthetic process" evidence=IMP

GO:0010306 "rhamnogalacturonan II biosynthetic process" evidence=IMP

GO:0005795 "Golgi stack" evidence=IDA

GO:0046983 "protein dimerization activity" evidence=IPI

GO:0042546 "cell wall biogenesis" evidence=IMP

TAIR|locus:2138121 UGE2 "UDP-D-glucose/UDP-D-galactose 4-epimerase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
 Identities = 87/193 (45%), Positives = 124/193 (64%)

Query:    73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
             VLVTGGAGYIGSH  L+LL+  Y   +VDN    +  +++ +++L  E G RL F   DL
Sbjct:     5 VLVTGGAGYIGSHTVLQLLEGGYSAVVVDNYDNSSAASLQRVKKLAGENGNRLSFHQVDL 64

Query:   132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
              D  A+ K FSE  FDAV+HFA +  VGES   PL YY+N    T+ +LE MA++G   L
Sbjct:    65 RDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQYGCKNL 124

Query:   192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN-SDMAVMILRYFNV 250
             ++SS+   YG P+++P TEE+P +  NPYG+ K   E+I  D  ++ S+  +++LRYFN 
Sbjct:   125 VFSSSATVYGWPKEVPCTEESPISATNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNP 184

Query:   251 IGSDPEGRLGEAP 263
             +G+ P G +GE P
Sbjct:   185 VGAHPSGYIGEDP 197

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA;IGI;IDA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0046983 "protein dimerization activity" evidence=IPI

GO:0042546 "cell wall biogenesis" evidence=IMP

TIGR_CMR|BA_5700 BA_5700 "UDP-glucose 4-epimerase" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
 Identities = 79/192 (41%), Positives = 123/192 (64%)

Query:    73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
             +L+TGGAGYIGSH  + LL ++Y++ +VDNLS  +I ++  ++E+  +  + +F   ++ 
Sbjct:     3 ILITGGAGYIGSHTCVELLNNNYKIIVVDNLSNSSIESLNRVKEITGK--QFEFYKENVL 60

Query:   133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
             + + +N+ F EN  +AV+HFA    VGEST  PL YY+N   + +V+ + M +H V   I
Sbjct:    61 NREKMNEIFLENNIEAVIHFAGFKAVGESTTTPLAYYYNNIISAIVLCDVMQKHNVKNFI 120

Query:   193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSD-MAVMILRYFNVI 251
             +SS+   YG P+ +PITEE P +  NPYG+ K M E I+ D +K  D  ++ +LRYFN  
Sbjct:   121 FSSSATVYGIPKTLPITEEFPLSVTNPYGQTKLMIEQIMRDVAKADDEWSIALLRYFNPF 180

Query:   252 GSDPEGRLGEAP 263
             G+   GR+GE P
Sbjct:   181 GAHQSGRIGEDP 192

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=ISS

GO:0006012 "galactose metabolic process" evidence=ISS

TIGR_CMR|CJE_1273 CJE_1273 "UDP-glucose 4-epimerase" [Campylobacter jejuni RM1221 (taxid:195099)]

 Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
 Identities = 85/197 (43%), Positives = 125/197 (63%)

Query:    73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
             +L++GGAGYIGSH   + LK  + + ++DNLS+G+  A++ LQ++       +F   DL 
Sbjct:     3 ILISGGAGYIGSHTLRQFLKTDHEICVLDNLSKGSKIAIEDLQKI----RAFKFFEQDLS 58

Query:   133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
             D + V   F    FDA++HFAA   V ES  +PLKYY N T NT  ++E+  + GV+  I
Sbjct:    59 DFQGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYMNNTVNTTNLIETCLQTGVNKFI 118

Query:   193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNVI 251
             +SST ATYGEP+   ++E +P APINPYG++K M+E+++ D S  N +    ILRYFNV 
Sbjct:   119 FSSTAATYGEPQTPVVSETSPLAPINPYGRSKLMSEEVLRDASMANPEFKHCILRYFNVA 178

Query:   252 GSDPEGRLGEA-PRPEL 267
             G+  +  LG+  P+  L
Sbjct:   179 GACMDYTLGQRYPKATL 195

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=ISS

GO:0006012 "galactose metabolic process" evidence=ISS

UNIPROTKB|Q9KLH0 VC_A0774 "UDP-glucose 4-epimerase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
 Identities = 78/193 (40%), Positives = 117/193 (60%)

Query:    73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
             VLVTGG GYIGSH  +++++      I+DNL    +  +  ++++     R QF+  D+ 
Sbjct:     3 VLVTGGMGYIGSHTCIQMIQAGMTPVILDNLYNSKVTVLDRIEKVIGV--RPQFVQGDIR 60

Query:   133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
             D   +     ++  +AV+HFA +  VGES   PL+YY N  + TLV++ +M   GV +L+
Sbjct:    61 DKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVKSLV 120

Query:   193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNVI 251
             +SS+   YGEP  +PITE  P    NPYG++K M E+ + DF K N D ++ +LRYFN +
Sbjct:   121 FSSSATVYGEPTSVPITESFPTKAANPYGRSKLMVEECLTDFQKANPDWSITLLRYFNPV 180

Query:   252 GSDPEGRLGEAPR 264
             GS P G LGE P+
Sbjct:   181 GSHPSGELGEDPQ 193

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=ISS

GO:0006012 "galactose metabolic process" evidence=ISS

TIGR_CMR|VC_A0774 VC_A0774 "UDP-glucose 4-epimerase" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
 Identities = 78/193 (40%), Positives = 117/193 (60%)

Query:    73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
             VLVTGG GYIGSH  +++++      I+DNL    +  +  ++++     R QF+  D+ 
Sbjct:     3 VLVTGGMGYIGSHTCIQMIQAGMTPVILDNLYNSKVTVLDRIEKVIGV--RPQFVQGDIR 60

Query:   133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
             D   +     ++  +AV+HFA +  VGES   PL+YY N  + TLV++ +M   GV +L+
Sbjct:    61 DKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVKSLV 120

Query:   193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNVI 251
             +SS+   YGEP  +PITE  P    NPYG++K M E+ + DF K N D ++ +LRYFN +
Sbjct:   121 FSSSATVYGEPTSVPITESFPTKAANPYGRSKLMVEECLTDFQKANPDWSITLLRYFNPV 180

Query:   252 GSDPEGRLGEAPR 264
             GS P G LGE P+
Sbjct:   181 GSHPSGELGEDPQ 193

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=ISS

GO:0006012 "galactose metabolic process" evidence=ISS

DICTYBASE|DDB_G0275295 galE "UDP-glucose 4-epimerase" [Dictyostelium discoideum (taxid:44689)]

 Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
 Identities = 76/193 (39%), Positives = 121/193 (62%)

Query:    73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
             ++VTGGAGYIGSH  + L++  Y   IVDNLS  ++ A+K ++ +  +   ++F + D+ 
Sbjct:     8 IMVTGGAGYIGSHTVIELIEAGYTPVIVDNLSNSSLEAIKRVESITGK--EIEFHHVDIM 65

Query:   133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
             + KA+++ F      +V+HFA +  VGES   PLKYY+N  + TL +L  M +H V  L+
Sbjct:    66 NEKALDEIFETGNIRSVIHFAGLKAVGESNKLPLKYYNNNIAGTLTLLNLMDKHRVKKLV 125

Query:   193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDF-SKNSDMAVMILRYFNVI 251
             +SS+   YG+P  +PITE+ P +  NPYG+ K   E I+ D  + + +   ++LRYFN +
Sbjct:   126 FSSSATVYGDPHTVPITEDFPLSATNPYGRTKLYVEGILQDLCASDPEWNCIMLRYFNPV 185

Query:   252 GSDPEGRLGEAPR 264
             G+ P G +GE P+
Sbjct:   186 GAHPSGLIGEDPK 198

GO:0050662 "coenzyme binding" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0016857 "racemase and epimerase activity, acting on carbohydrates and derivatives" evidence=IEA

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0016853 "isomerase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8H0B6	ARAE2_ORYSJ	5, ., 1, ., 3, ., 5	0.8327	0.9087	0.6879	yes	no
Q9SA77	ARAE1_ARATH	5, ., 1, ., 3, ., 5	0.8586	0.9797	0.6921	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	5.1.3	0.963

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	296
cd05247	323	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase,	1e-102
COG1087	329	COG1087, GalE, UDP-glucose 4-epimerase [Cell envel	1e-90
TIGR01179	328	TIGR01179, galE, UDP-glucose-4-epimerase GalE	2e-85
PLN02240	352	PLN02240, PLN02240, UDP-glucose 4-epimerase	8e-71
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	3e-47
PRK10675	338	PRK10675, PRK10675, UDP-galactose-4-epimerase; Pro	5e-46
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	8e-44
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	2e-40
cd08946	200	cd08946, SDR_e, extended (e) SDRs	9e-40
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	8e-38
cd05253	332	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera	1e-29
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	1e-28
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	2e-28
cd05260	316	cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase	5e-24
TIGR01181	317	TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd	2e-21
COG1088	340	COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cel	2e-20
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	3e-20
cd05230	305	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase	1e-19
cd05237	287	cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l	2e-19
cd08957	307	cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic	5e-19
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	5e-19
cd05238	305	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n	6e-19
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	1e-18
PLN02260	668	PLN02260, PLN02260, probable rhamnose biosynthetic	4e-18
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	1e-17
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	7e-17
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	1e-16
TIGR02197	314	TIGR02197, heptose_epim, ADP-L-glycero-D-manno-hep	4e-16
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	6e-16
cd05248	317	cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannohepto	2e-14
COG1086	588	COG1086, COG1086, Predicted nucleoside-diphosphate	2e-13
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	7e-13
PLN02166	436	PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase	2e-12
PRK15181	348	PRK15181, PRK15181, Vi polysaccharide biosynthesis	4e-12
COG1089	345	COG1089, Gmd, GDP-D-mannose dehydratase [Cell enve	4e-12
PRK10084	352	PRK10084, PRK10084, dTDP-glucose 4,6 dehydratase;	1e-11
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	1e-11
PLN02206	442	PLN02206, PLN02206, UDP-glucuronate decarboxylase	2e-11
PRK10217	355	PRK10217, PRK10217, dTDP-glucose 4,6-dehydratase;	4e-11
pfam02719	280	pfam02719, Polysacc_synt_2, Polysaccharide biosynt	4e-11
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	7e-11
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	3e-10
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	4e-10
cd05255	382	cd05255, SQD1_like_SDR_e, UDP_sulfoquinovose_synth	6e-10
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	1e-09
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	1e-09
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	3e-09
TIGR01214	287	TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase	3e-09
COG1091	281	COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C	4e-09
cd05239	300	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte	7e-09
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	1e-08
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	1e-08
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	2e-08
cd05252	336	cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata	1e-07
cd09811	354	cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD	2e-07
TIGR01472	343	TIGR01472, gmd, GDP-mannose 4,6-dehydratase	2e-07
pfam04321	284	pfam04321, RmlD_sub_bind, RmlD substrate binding d	3e-07
cd05233	234	cd05233, SDR_c, classical (c) SDRs	6e-07
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-07
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-06
PRK11150	308	PRK11150, rfaD, ADP-L-glycero-D-mannoheptose-6-epi	2e-06
PLN02653	340	PLN02653, PLN02653, GDP-mannose 4,6-dehydratase	4e-06
TIGR03589	324	TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehyd	5e-06
PLN02695	370	PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase	6e-06
cd09812	339	cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid	6e-06
PLN02572	442	PLN02572, PLN02572, UDP-sulfoquinovose synthase	1e-05
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	1e-05
cd05272	308	cd05272, TDH_SDR_e, L-threonine dehydrogenase, ext	2e-05
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	3e-05
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	4e-05
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	6e-05
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	7e-05
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	9e-05
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	1e-04
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	1e-04
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	4e-04
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	4e-04
COG3320	382	COG3320, COG3320, Putative dehydrogenase domain of	5e-04
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	5e-04
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	6e-04
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	8e-04
PLN02657	390	PLN02657, PLN02657, 3,8-divinyl protochlorophyllid	0.001
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	0.001
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	0.001
TIGR02622	349	TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydra	0.001
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	0.001
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	0.001
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	0.001
TIGR01746	367	TIGR01746, Thioester-redct, thioester reductase do	0.002
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	0.002
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	0.002
cd05235	290	cd05235, SDR_e1, extended (e) SDRs, subgroup 1	0.003
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	0.003
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	0.003
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	0.003
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	0.004
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	0.004

>gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

 Score =  300 bits (772), Expect = e-102
 Identities = 96/219 (43%), Positives = 129/219 (58%), Gaps = 9/219 (4%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            VLVTGGAGYIGSH  + LL+  Y V ++DNLS G+  A+  ++++  E     F   D+
Sbjct: 1   KVLVTGGAGYIGSHTVVELLEAGYDVVVLDNLSNGHREALPRIEKIRIE-----FYEGDI 55

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            D  A++K F+E+  DAV+HFAA+  VGES   PLKYY N    TL +LE+M  HGV   
Sbjct: 56  RDRAALDKVFAEHKIDAVIHFAALKAVGESVQKPLKYYDNNVVGTLNLLEAMRAHGVKNF 115

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVI 251
           ++SS+ A YGEPE +PITEE P  P NPYG+ K M E I+ D +K   +  +ILRYFN  
Sbjct: 116 VFSSSAAVYGEPETVPITEEAPLNPTNPYGRTKLMVEQILRDLAKAPGLNYVILRYFNPA 175

Query: 252 GSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKV 290
           G+ P G +GE P+        +       A G    L +
Sbjct: 176 GAHPSGLIGEDPQIP----NNLIPYVLQVALGRREKLAI 210

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323

>gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

 Score =  272 bits (697), Expect = 1e-90
 Identities = 94/194 (48%), Positives = 122/194 (62%), Gaps = 8/194 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGGAGYIGSH   +LLK  + V ++DNLS G+  A+  LQ         +F   DL 
Sbjct: 3   VLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ--------FKFYEGDLL 54

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D   +   F EN  DAV+HFAA   VGES  +PLKYY N    TL ++E+M + GV   I
Sbjct: 55  DRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFI 114

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIG 252
           +SST A YGEP   PI+E +P APINPYG++K M+E+I+ D +K +   V+ILRYFNV G
Sbjct: 115 FSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRDAAKANPFKVVILRYFNVAG 174

Query: 253 SDPEGRLGEAPRPE 266
           + P+G LG+     
Sbjct: 175 ACPDGTLGQRYPGA 188

Length = 329

>gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE

 Score =  258 bits (662), Expect = 2e-85
 Identities = 90/195 (46%), Positives = 125/195 (64%), Gaps = 5/195 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTGGAGYIGSH   +LL+  + V I+DNLS G+  A+   + + P      F+  DL 
Sbjct: 2   ILVTGGAGYIGSHTVRQLLESGHEVVILDNLSNGSREALPRGERITPVT----FVEGDLR 57

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D + +++ F E+  DAV+HFA +  VGES   PLKYY N    TL +LE+M + GV   I
Sbjct: 58  DRELLDRLFEEHKIDAVIHFAGLIAVGESVQKPLKYYRNNVVGTLNLLEAMQQAGVKKFI 117

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNVI 251
           +SS+ A YGEP  +PI+E++P  PINPYG++K M+E I+ D  K + D + +ILRYFNV 
Sbjct: 118 FSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSEQILRDLQKADPDWSYVILRYFNVA 177

Query: 252 GSDPEGRLGEAPRPE 266
           G+ P G +GE P   
Sbjct: 178 GAHPSGDIGEDPPGI 192

Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328

>gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase

 Score =  222 bits (567), Expect = 8e-71
 Identities = 87/194 (44%), Positives = 124/194 (63%), Gaps = 2/194 (1%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
           +LVTGGAGYIGSH  L+LL   Y+V ++DNL   +  A++ ++EL  + G  L F   DL
Sbjct: 8   ILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDL 67

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            D +A+ K F+   FDAV+HFA +  VGES   PL YY N    T+ +LE MA+HG   L
Sbjct: 68  RDKEALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKL 127

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNV 250
           ++SS+   YG+PE++P TEE P +  NPYG+ K   E+I  D    + +  +++LRYFN 
Sbjct: 128 VFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNP 187

Query: 251 IGSDPEGRLGEAPR 264
           +G+ P GR+GE P+
Sbjct: 188 VGAHPSGRIGEDPK 201

Length = 352

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score =  157 bits (400), Expect = 3e-47
 Identities = 66/180 (36%), Positives = 96/180 (53%), Gaps = 10/180 (5%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTGG G+IGSH   RLL++ Y V     L R         +      GR++F   DL 
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVI---VLGRRR-------RSESLNTGRIRFHEGDLT 50

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D  A+ +  +E   DAV+H AA + VG S  DP  +       TL +LE+  R GV   +
Sbjct: 51  DPDALERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAGVKRFV 110

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIG 252
           ++S+   YG+    PITE+TP  P++PY  AK  AE ++  +++   +  +ILR FNV G
Sbjct: 111 FASSSEVYGDVADPPITEDTPLGPLSPYAAAKLAAERLVEAYARAYGLRAVILRLFNVYG 170

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|182639 PRK10675, PRK10675, UDP-galactose-4-epimerase; Provisional

 Score =  157 bits (399), Expect = 5e-46
 Identities = 75/194 (38%), Positives = 114/194 (58%), Gaps = 4/194 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V  LI
Sbjct: 61  NEALLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLI 120

Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNV 250
           +SS+   YG+  K+P  E  P   P +PYGK+K M E I+ D  K   D ++ +LRYFN 
Sbjct: 121 FSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNP 180

Query: 251 IGSDPEGRLGEAPR 264
           +G+ P G +GE P+
Sbjct: 181 VGAHPSGDMGEDPQ 194

Length = 338

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score =  151 bits (383), Expect = 8e-44
 Identities = 71/189 (37%), Positives = 100/189 (52%), Gaps = 12/189 (6%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE-PGRLQFIYAD 130
            VLVTGGAG+IGSH   RLL+  + V ++DNLS G        +E  PE    ++FI  D
Sbjct: 1   RVLVTGGAGFIGSHLVERLLERGHEVIVLDNLSTGK-------KENLPEVKPNVKFIEGD 53

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           + D + V   F     D V H AA A V  S  DP+K +      TL +LE+  + GV  
Sbjct: 54  IRDDELVEFAFEG--VDYVFHQAAQASVPRSIEDPIKDHEVNVLGTLNLLEAARKAGVKR 111

Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNV 250
            +Y+S+ + YG+P  +P  E+ P  P++PY  +K   E     F++   +  + LRYFNV
Sbjct: 112 FVYASSSSVYGDPPYLPKDEDHPPNPLSPYAVSKYAGELYCQVFARLYGLPTVSLRYFNV 171

Query: 251 IG--SDPEG 257
            G   DP G
Sbjct: 172 YGPRQDPNG 180

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score =  142 bits (360), Expect = 2e-40
 Identities = 64/184 (34%), Positives = 97/184 (52%), Gaps = 14/184 (7%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            +LVTGGAG+IGSH   RLL   + V  +D L  G            P    ++F+  DL
Sbjct: 2   RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLD----------PLLSGVEFVVLDL 51

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTL-DPLKYYHNITSNTLVVLESMARHGVDT 190
            D   V++       DAV+H AA + V +S   DP ++       TL +LE+    GV  
Sbjct: 52  TDRDLVDELAKG-VPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKR 110

Query: 191 LIYSSTCAT-YGEPEKMPITEE-TPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYF 248
            +++S+ +  YG+P  +PI E+  P  P+NPYG +K  AE ++  +++   + V+ILR F
Sbjct: 111 FVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPF 170

Query: 249 NVIG 252
           NV G
Sbjct: 171 NVYG 174

Length = 314

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score =  137 bits (347), Expect = 9e-40
 Identities = 61/212 (28%), Positives = 93/212 (43%), Gaps = 55/212 (25%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTGGAG+IGSH   RLL+  + V ++D                               
Sbjct: 1   ILVTGGAGFIGSHLVRRLLERGHEVVVIDR------------------------------ 30

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGVDTL 191
                         D V+H AA+  V  S  +P + +  N+   TL +LE+  + GV   
Sbjct: 31  -------------LDVVVHLAALVGVPASWDNPDEDFETNVVG-TLNLLEAARKAGVKRF 76

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVI 251
           +Y+S+ + YG PE +P  EETP  P++PYG +K  AE ++  + ++  + V+ILR  NV 
Sbjct: 77  VYASSASVYGSPEGLPEEEETPPRPLSPYGVSKLAAEHLLRSYGESYGLPVVILRLANVY 136

Query: 252 GSDPEGRLGEAPRPELREHGRISGACFDAARG 283
           G          P    R  G ++     A  G
Sbjct: 137 G----------PGQRPRLDGVVNDFIRRALEG 158

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score =  135 bits (342), Expect = 8e-38
 Identities = 60/182 (32%), Positives = 89/182 (48%), Gaps = 7/182 (3%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            +LVTGGAG+IGSH   RLL++   V +VDNLS G    ++   E        +F+  DL
Sbjct: 1   RILVTGGAGFIGSHLVDRLLEEGNEVVVVDNLSSGRRENIEPEFENK----AFRFVKRDL 56

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            D        ++   D V H AA   V     DP          T  VLE+M  +GV  +
Sbjct: 57  LDTADK---VAKKDGDTVFHLAANPDVRLGATDPDIDLEENVLATYNVLEAMRANGVKRI 113

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVI 251
           +++S+   YGE + +P  E+ P  PI+ YG +K  AE +I  ++        I R+ N++
Sbjct: 114 VFASSSTVYGEAKVIPTPEDYPPLPISVYGASKLAAEALISAYAHLFGFQAWIFRFANIV 173

Query: 252 GS 253
           G 
Sbjct: 174 GP 175

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs

 Score =  114 bits (287), Expect = 1e-29
 Identities = 70/193 (36%), Positives = 102/193 (52%), Gaps = 14/193 (7%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQ---ELFPEPGRLQFIYA 129
           +LVTG AG+IG H A RLL+    V  +DNL+  +   V++ +   EL  + G  +F+  
Sbjct: 3   ILVTGAAGFIGFHVAKRLLERGDEVVGIDNLN--DYYDVRLKEARLELLGKSGGFKFVKG 60

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMARH 186
           DL D +A+ + F ++ FDAV+H AA A V  S  +P  Y   + SN    L +LE     
Sbjct: 61  DLEDREALRRLFKDHEFDAVIHLAAQAGVRYSLENPHAY---VDSNIVGFLNLLELCRHF 117

Query: 187 GVDTLIYSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSKNSDMAVMIL 245
           GV  L+Y+S+ + YG   KMP +E+     PI+ Y   KK  E +   +S    +    L
Sbjct: 118 GVKHLVYASSSSVYGLNTKMPFSEDDRVDHPISLYAATKKANELMAHTYSHLYGIPTTGL 177

Query: 246 RYFNVIGSDPEGR 258
           R+F V G  P GR
Sbjct: 178 RFFTVYG--PWGR 188

This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score =  111 bits (280), Expect = 1e-28
 Identities = 62/188 (32%), Positives = 103/188 (54%), Gaps = 12/188 (6%)

Query: 71  THVLVTGGAGYIGSHAALRLLK--DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIY 128
             +LVTGGAG+IGS+    LL     Y++  +D L+    G ++ L+++   P R +F+ 
Sbjct: 1   MKILVTGGAGFIGSNFVRYLLNKYPDYKIINLDKLTYA--GNLENLEDVSSSP-RYRFVK 57

Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMAR 185
            D+ DA+ V++ F E   DAV+HFAA ++V  S  DP  +   I +N   T  +LE+  +
Sbjct: 58  GDICDAELVDRLFEEEKIDAVIHFAAESHVDRSISDPEPF---IRTNVLGTYTLLEAARK 114

Query: 186 HGVDTLIYSSTCATYGE-PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMI 244
           +GV   ++ ST   YG+  +    TE +P AP +PY  +K  A+ ++  + +   + V+I
Sbjct: 115 YGVKRFVHISTDEVYGDLLDDGEFTETSPLAPTSPYSASKAAADLLVRAYHRTYGLPVVI 174

Query: 245 LRYFNVIG 252
            R  N  G
Sbjct: 175 TRCSNNYG 182

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score =  110 bits (277), Expect = 2e-28
 Identities = 57/185 (30%), Positives = 85/185 (45%), Gaps = 10/185 (5%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           +VLVTG  G+IGSH   RLL++ + V  +D  +  N               R  FI  D+
Sbjct: 1   NVLVTGADGFIGSHLTERLLREGHEVRALDIYNSFN----SWGLLDNAVHDRFHFISGDV 56

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            DA  V     +   D V H AA+  +  S   PL Y       TL VLE+        +
Sbjct: 57  RDASEVEYLVKKC--DVVFHLAALIAIPYSYTAPLSYVETNVFGTLNVLEAACVLYRKRV 114

Query: 192 IYSSTCATYGEPEKMPITEETPQAPIN----PYGKAKKMAEDIILDFSKNSDMAVMILRY 247
           +++ST   YG  + +PI E+ P   IN    PY  +K+ A+ +   + ++  + V I+R 
Sbjct: 115 VHTSTSEVYGTAQDVPIDEDHPLLYINKPRSPYSASKQGADRLAYSYGRSFGLPVTIIRP 174

Query: 248 FNVIG 252
           FN  G
Sbjct: 175 FNTYG 179

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs

 Score = 98.8 bits (247), Expect = 5e-24
 Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 5/182 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            L+TG  G  GS+ A  LL+  Y V  IV   S  N      +  L+    R+   Y DL
Sbjct: 2   ALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTD---RIDHLYINKDRITLHYGDL 58

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            D+ ++ +   +   D + H AA ++V  S  DP          TL +LE++   G+D  
Sbjct: 59  TDSSSLRRAIEKVRPDEIYHLAAQSHVKVSFDDPEYTAEVNAVGTLNLLEAIRILGLDAR 118

Query: 192 IY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNV 250
            Y +S+   YG+ +++P +E TP  P +PY  +K  A+ I  ++ +   +  +  R FN 
Sbjct: 119 FYQASSSEEYGKVQELPQSETTPFRPRSPYAVSKLYADWITRNYREAYGLFAVNGRLFNH 178

Query: 251 IG 252
            G
Sbjct: 179 EG 180

GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase

 Score = 91.7 bits (228), Expect = 2e-21
 Identities = 59/185 (31%), Positives = 97/185 (52%), Gaps = 9/185 (4%)

Query: 73  VLVTGGAGYIGS---HAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA 129
           +LVTGGAG+IGS      L    D   V ++D L+    G ++ L +L   P R +F+  
Sbjct: 2   ILVTGGAGFIGSNFVRYILNEHPD-AEVIVLDKLTYA--GNLENLADLEDNP-RYRFVKG 57

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
           D+GD + V++ F+E+  DAV+HFAA ++V  S   P  +       T  +LE++ ++  +
Sbjct: 58  DIGDRELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHE 117

Query: 190 T-LIYSSTCATYGEPEK-MPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRY 247
               + ST   YG+ EK    TE TP AP +PY  +K  ++ ++  + +   +  +I R 
Sbjct: 118 FRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASDHLVRAYHRTYGLPALITRC 177

Query: 248 FNVIG 252
            N  G
Sbjct: 178 SNNYG 182

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317

>gnl|CDD|224013 COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

 Score = 89.2 bits (222), Expect = 2e-20
 Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 17/168 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLK--DSYRVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIYA 129
           +LVTGGAG+IGS+    +L       V  +D L+  GN+  +  +++      R +F+  
Sbjct: 3   ILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDS----PRYRFVQG 58

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMARH 186
           D+ D + V++ F E   DAV+HFAA ++V  S   P  +   I +N   T  +LE+  ++
Sbjct: 59  DICDRELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPF---IQTNVVGTYTLLEAARKY 115

Query: 187 GVDT-LIYSSTCATYGEPEK--MPITEETPQAPINPYGKAKKMAEDII 231
                  + ST   YG+        TE TP  P +PY  A K A D++
Sbjct: 116 WGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYS-ASKAASDLL 162

Length = 340

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 88.1 bits (219), Expect = 3e-20
 Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 17/192 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VL+ GG G+IGSH    LL++  +V +     R       +     P  G + +I  D  
Sbjct: 2   VLIVGGNGFIGSHLVDALLEEGPQVRV---FDR------SIPPYELPLGG-VDYIKGDYE 51

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDP-LKYYHNITSNTLVVLESMARHGVDTL 191
           +   +         D V+H A+      S  +P L    N+   T+ +LE+ A  G+  +
Sbjct: 52  NRADLESALVG--IDTVIHLASTTNPATSNKNPILDIQTNVAP-TVQLLEACAAAGIGKI 108

Query: 192 IYSSTCAT-YGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNV 250
           I++S+  T YG PE++PI+E  P  PI+ YG +K   E  +  +     +   +LR  N 
Sbjct: 109 IFASSGGTVYGVPEQLPISESDPTLPISSYGISKLAIEKYLRLYQYLYGLDYTVLRISNP 168

Query: 251 IGS--DPEGRLG 260
            G    P+G+ G
Sbjct: 169 YGPGQRPDGKQG 180

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs

 Score = 86.2 bits (214), Expect = 1e-19
 Identities = 54/185 (29%), Positives = 83/185 (44%), Gaps = 17/185 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TGGAG++GSH   RLL+D + V  VDN   G     + ++ L   P   +FI  D+ 
Sbjct: 3   ILITGGAGFLGSHLCDRLLEDGHEVICVDNFFTGRK---RNIEHLIGHP-NFEFIRHDVT 58

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +             D + H A  A       +P+K        TL +L    R G   ++
Sbjct: 59  E-------PLYLEVDQIYHLACPASPVHYQYNPIKTLKTNVLGTLNMLGLAKRVGA-RVL 110

Query: 193 YSSTCATYGEPEKMPITEE-----TPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRY 247
            +ST   YG+PE  P  E       P  P + Y + K++AE + + + +   + V I R 
Sbjct: 111 LASTSEVYGDPEVHPQPESYWGNVNPIGPRSCYDEGKRVAETLCMAYHRQHGVDVRIARI 170

Query: 248 FNVIG 252
           FN  G
Sbjct: 171 FNTYG 175

UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs

 Score = 85.4 bits (212), Expect = 2e-19
 Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 21/186 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQEL---FPEPGRLQFIYA 129
           +LVTGGAG IGS    ++LK   +  IV    R      ++++EL   FP   +L+FI  
Sbjct: 5   ILVTGGAGSIGSELVRQILKFGPKKLIV--FDRDENKLHELVRELRSRFPHD-KLRFIIG 61

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
           D+ D + + + F E   D V H AA+ +V     +P +        T  V+++   +GV+
Sbjct: 62  DVRDKERLRRAFKERGPDIVFHAAALKHVPSMEDNPEEAIKTNVLGTKNVIDAAIENGVE 121

Query: 190 TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN-SDMAVMILRYF 248
             +  ST              +    P+N  G  K++AE ++L  ++  S      +R+ 
Sbjct: 122 KFVCIST--------------DKAVNPVNVMGATKRVAEKLLLAKNEYSSSTKFSTVRFG 167

Query: 249 NVIGSD 254
           NV+GS 
Sbjct: 168 NVLGSR 173

UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287

>gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs

 Score = 84.9 bits (210), Expect = 5e-19
 Identities = 65/220 (29%), Positives = 97/220 (44%), Gaps = 28/220 (12%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VL+TGGAG IGSH    LL+  ++V ++DN + G        +E  P+   L  +   + 
Sbjct: 3   VLITGGAGQIGSHLIEHLLERGHQVVVIDNFATGR-------REHLPDHPNLTVVEGSIA 55

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMARHGVD 189
           D   V+K F +   DAV+H  A AY      DP  +Y +  +N      V+++  + GV 
Sbjct: 56  DKALVDKLFGDFKPDAVVH-TAAAYK-----DPDDWYEDTLTNVVGGANVVQAAKKAGVK 109

Query: 190 TLIYSSTCATYG-EPEKMPITEETPQAPIN-PYGKAKKMAEDIILDFSKNSDMAVMILRY 247
            LIY  T   YG +P + PI  + P+AP    Y  +K   E  +      S +  +  R 
Sbjct: 110 RLIYFQTALCYGLKPMQQPIRLDHPRAPPGSSYAISKTAGEYYLE----LSGVDFVTFRL 165

Query: 248 FNVIGSDPEGRLGEAPRPELREHGRISGACF--DAARGII 285
            NV G     R    P P   +  +    CF  D  R  +
Sbjct: 166 ANVTGP----RNVIGPLPTFYQRLKAGKKCFVTDTRRDFV 201

Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score = 84.7 bits (210), Expect = 5e-19
 Identities = 59/183 (32%), Positives = 92/183 (50%), Gaps = 9/183 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPE-PGRLQFIYAD 130
           VLVTG  G+IGSH    L++  Y V   V   S  + G    L    PE   +++ +  D
Sbjct: 1   VLVTGADGFIGSHLVEALVRQGYEVRAFVLYNSFNSWGW---LDTSPPEVKDKIEVVTGD 57

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGVD 189
           + D  +V K  +    D V H AA+  +  S + P  Y   N+T  TL VL++    GV+
Sbjct: 58  IRDPDSVRK--AMKGCDVVFHLAALIAIPYSYIAPDSYVDTNVTG-TLNVLQAARDLGVE 114

Query: 190 TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFN 249
            ++++ST   YG  + +PI E+ P    +PY  +K  A+ + L F ++ +  V I+R FN
Sbjct: 115 KVVHTSTSEVYGTAQYVPIDEKHPLQGQSPYSASKIGADQLALSFYRSFNTPVTIIRPFN 174

Query: 250 VIG 252
             G
Sbjct: 175 TYG 177

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

>gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs

 Score = 84.7 bits (210), Expect = 6e-19
 Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 17/168 (10%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIY 128
            VL+TG +G++G   A RLL D    R+ ++D           V+    P    R+  I 
Sbjct: 2   KVLITGASGFVGQRLAERLLSDVPNERLILID-----------VVSPKAPSGAPRVTQIA 50

Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            DL     +    +    D V H AA+   G +  D    Y      T  +LE++ ++G 
Sbjct: 51  GDLAVPALIEALANGRP-DVVFHLAAI-VSGGAEADFDLGYRVNVDGTRNLLEALRKNGP 108

Query: 189 DT-LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFS 235
               +++S+ A YG P   P+T+ T   P + YG  K M E ++ D+S
Sbjct: 109 KPRFVFTSSLAVYGLPLPNPVTDHTALDPASSYGAQKAMCELLLNDYS 156

Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 83.9 bits (208), Expect = 1e-18
 Identities = 55/178 (30%), Positives = 75/178 (42%), Gaps = 22/178 (12%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTI-VDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           VLVTG  G+IG     +LL     V I V N        V                 A+L
Sbjct: 2   VLVTGANGFIGRALVDKLLSRGEEVRIAVRNAENAEPSVVL----------------AEL 45

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYV-GESTLDPLKYYHNI-TSNTLVVLESMARHGVD 189
            D  +    F     DAV+H AA  +V  +   DPL  Y  + T  T  +  + AR GV 
Sbjct: 46  PDIDSFTDLFLG--VDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQGVK 103

Query: 190 TLIYSSTCATYGEP-EKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
             ++ S+    GE     P  E  P AP + YG++K  AE  +L+   +  M V+ILR
Sbjct: 104 RFVFLSSVKVNGEGTVGAPFDETDPPAPQDAYGRSKLEAERALLELGASDGMEVVILR 161

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|215146 PLN02260, PLN02260, probable rhamnose biosynthetic enzyme

 Score = 84.0 bits (208), Expect = 4e-18
 Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 15/194 (7%)

Query: 73  VLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPG--RLQFIY 128
           +L+TG AG+I SH A RL+++   Y++ ++D L          L+ L P       +F+ 
Sbjct: 9   ILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDY-----CSNLKNLNPSKSSPNFKFVK 63

Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG- 187
            D+  A  VN        D +MHFAA  +V  S  +  ++  N    T V+LE+    G 
Sbjct: 64  GDIASADLVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123

Query: 188 VDTLIYSSTCATYGEPEKMPIT---EETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMI 244
           +   I+ ST   YGE ++       E +   P NPY   K  AE +++ + ++  + V+ 
Sbjct: 124 IRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 183

Query: 245 LRYFNVIGSD--PE 256
            R  NV G +  PE
Sbjct: 184 TRGNNVYGPNQFPE 197

Length = 668

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 81.2 bits (201), Expect = 1e-17
 Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 38/203 (18%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR----GNIGAVKVLQELFPEPGRLQFIY 128
           VL+TGGAG+IGS+ A   LK  + V   DNL R    GN+  +K  +E     G ++F++
Sbjct: 3   VLITGGAGFIGSNLARFFLKQGWEVIGFDNLMRRGSFGNLAWLKANRED----GGVRFVH 58

Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMAR 185
            D+ +   +   F +   D ++H AA   V  S   P     +  +N   TL VLE+  +
Sbjct: 59  GDIRNRNDLEDLFED--IDLIIHTAAQPSVTTSASSP---RLDFETNALGTLNVLEAARQ 113

Query: 186 HGVDT-LIYSSTCATYG-EPEKMP-------------------ITEETP-QAPINPYGKA 223
           H  +   I++ST   YG  P  +P                   I+E  P     + YG +
Sbjct: 114 HAPNAPFIFTSTNKVYGDLPNYLPLEELETRYELAPEGWSPAGISESFPLDFSHSLYGAS 173

Query: 224 KKMAEDIILDFSKNSDMAVMILR 246
           K  A+  + ++ +   +  ++ R
Sbjct: 174 KGAADQYVQEYGRIFGLKTVVFR 196

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score = 78.9 bits (195), Expect = 7e-17
 Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 51/203 (25%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRV-TIVDNLSRGNIGAVKVLQELFPE---PGRLQFIY 128
           VLVTG  G+I SH   +LLK  Y+V   V +LS+        L+ L        RL+F+ 
Sbjct: 2   VLVTGATGFIASHIVEQLLKAGYKVRGTVRSLSK-----SAKLKALLKAAGYNDRLEFVI 56

Query: 129 ADLGDAKAVNKFFSENAFD-------AVMHFA-AVAYVG----ESTLDPLKYYHNITSNT 176
            D           + NA+D        V+H A    + G    +  +DP       T N 
Sbjct: 57  VDD--------LTAPNAWDEALKGVDYVIHVASPFPFTGPDAEDDVIDPAV---EGTLN- 104

Query: 177 LVVLESMARHG-VDTLIYSSTCA----TYGEPEKMPITEE-------TPQAPINPYGKAK 224
             VLE+    G V  ++ +S+ A       E      TEE       +    ++ Y  +K
Sbjct: 105 --VLEAAKAAGSVKRVVLTSSVAAVGDPTAEDPGKVFTEEDWNDLTISKSNGLDAYIASK 162

Query: 225 KMAEDIILDFSKNS----DMAVM 243
            +AE    +F K +    ++  +
Sbjct: 163 TLAEKAAWEFVKENKPKFELITI 185

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 78.5 bits (194), Expect = 1e-16
 Identities = 47/176 (26%), Positives = 73/176 (41%), Gaps = 16/176 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTG  G++GS+    LL   YRV     L R    +      L   P  ++ +  DL 
Sbjct: 1   ILVTGATGFLGSNLVRALLAQGYRVRA---LVR----SGSDAVLLDGLP--VEVVEGDLT 51

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           DA ++         D V H AA         D  + Y      T  VL++    GV  ++
Sbjct: 52  DAASLAAAMKG--CDRVFHLAAFTS--LWAKDRKELYRTNVEGTRNVLDAALEAGVRRVV 107

Query: 193 YSSTCATYGEPEKMPITEETPQAPI---NPYGKAKKMAEDIILDFSKNSDMAVMIL 245
           ++S+ A  G P    I E TP       N Y ++K +AE  +L+ +      V++ 
Sbjct: 108 HTSSIAALGGPPDGRIDETTPWNERPFPNDYYRSKLLAELEVLEAAAEGLDVVIVN 163

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|233775 TIGR02197, heptose_epim, ADP-L-glycero-D-manno-heptose-6-epimerase

 Score = 76.9 bits (190), Expect = 4e-16
 Identities = 47/190 (24%), Positives = 77/190 (40%), Gaps = 28/190 (14%)

Query: 73  VLVTGGAGYIGSHAALRL----LKDSYRVTIVDNLSRG--NIGAVKVLQELFPEPGRLQF 126
           ++VTGGAG+IGS+    L    + D   + +VDNL  G   +                  
Sbjct: 1   IIVTGGAGFIGSNLVKALNERGITD---ILVVDNLRDGHKFLNLAD------------LV 45

Query: 127 IYADLGDAKAVNKFFSENA--FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMA 184
           I   +     +++         +A+ H  A +   E   D      N    +  +L+  A
Sbjct: 46  IADYIDKEDFLDRLEKGAFGKIEAIFHQGACSDTTE--TDGEYMMENNYQYSKRLLDWCA 103

Query: 185 RHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILD--FSKNSDMAV 242
             G+   IY+S+ ATYG+ E         + P+N YG +K + +  +      +     V
Sbjct: 104 EKGI-PFIYASSAATYGDGEAGFREGRELERPLNVYGYSKFLFDQYVRRRVLPEALSAQV 162

Query: 243 MILRYFNVIG 252
           + LRYFNV G
Sbjct: 163 VGLRYFNVYG 172

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 314

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score = 76.4 bits (188), Expect = 6e-16
 Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 31/194 (15%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG  G+IGSH A RL  + + V   D  S  ++       E         F   DL 
Sbjct: 3   ALVTGAGGFIGSHLAERLKAEGHYVRGADWKSPEHMTQPTDDDE---------FHLVDLR 53

Query: 133 DAKAVNKFFSENAFDAVMHFAA----VAYVGESTLDPLKYYHNITSNTLV---VLESMAR 185
           + +   K       D V H AA    + Y+  +      +   + +NTL+   +LE+   
Sbjct: 54  EMENCLKATEG--VDHVFHLAADMGGMGYIQSN------HAVIMYNNTLINFNMLEAARI 105

Query: 186 HGVDTLIYSSTCATYG-----EPEKMPITEE--TPQAPINPYGKAKKMAEDIILDFSKNS 238
           +GV+  +++S+   Y      E   + + EE   P  P + YG  K   E +   ++++ 
Sbjct: 106 NGVERFLFASSACVYPEFKQLETTVVRLREEDAWPAEPQDAYGWEKLATERLCQHYNEDY 165

Query: 239 DMAVMILRYFNVIG 252
            +   I+R+ N+ G
Sbjct: 166 GIETRIVRFHNIYG 179

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|187559 cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannoheptose 6-epimerase (GME), extended (e) SDRs

 Score = 72.3 bits (178), Expect = 2e-14
 Identities = 49/187 (26%), Positives = 73/187 (39%), Gaps = 19/187 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           ++VTGGAG+IGS+    L +     + +VDNLS G      V  ++     +  F     
Sbjct: 2   IIVTGGAGFIGSNLVKALNERGITDILVVDNLSNGEKFKNLVGLKIADYIDKDDFK---- 57

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYY---HNITSNTLVVLESMARHGV 188
                V K       +A+ H  A +     T +    Y   +N    T  +L       +
Sbjct: 58  ---DWVRKGDENFKIEAIFHQGACS----DTTETDGKYMMDNNYQY-TKELLHYCLEKKI 109

Query: 189 DTLIYSSTCATYG--EPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
              IY+S+ A YG          E     P+N YG +K + +       K     V+ LR
Sbjct: 110 -RFIYASSAAVYGNGSLGFAEDIETPNLRPLNVYGYSKLLFDQWARRHGKEVLSQVVGLR 168

Query: 247 YFNVIGS 253
           YFNV G 
Sbjct: 169 YFNVYGP 175

This subgroup contains ADP-L-glycero-D-mannoheptose 6-epimerase, an extended SDR, which catalyzes the NAD-dependent interconversion of ADP-D-glycero-D-mannoheptose and ADP-L-glycero-D-mannoheptose. This subgroup has the canonical active site tetrad and NAD(P)-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 317

>gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 70.0 bits (172), Expect = 2e-13
 Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 33/192 (17%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAV-KVLQELFPEPGRLQFIYADL 131
           VLVTGG G IGS    ++LK + +  I+ +     +  +   L+E FPE  +L+F   D+
Sbjct: 253 VLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPEL-KLRFYIGDV 311

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-------NITSNTLVVLESMA 184
            D   V +    +  D V H AA+ +V      PL  Y+       N+   T  V E+  
Sbjct: 312 RDRDRVERAMEGHKVDIVFHAAALKHV------PLVEYNPEEAIKTNVLG-TENVAEAAI 364

Query: 185 RHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS---DMA 241
           ++GV   +  ST              +    P N  G  K++AE +    ++N       
Sbjct: 365 KNGVKKFVLIST--------------DKAVNPTNVMGATKRLAEKLFQAANRNVSGTGTR 410

Query: 242 VMILRYFNVIGS 253
             ++R+ NV+GS
Sbjct: 411 FCVVRFGNVLGS 422

Length = 588

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 67.4 bits (165), Expect = 7e-13
 Identities = 51/185 (27%), Positives = 86/185 (46%), Gaps = 19/185 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTG AG +G     R L  S RV  VD L R               P +++++  D+ 
Sbjct: 1   ILVTGAAGGLG-RLLARRLAASPRVIGVDGLDRRRPP---------GSPPKVEYVRLDIR 50

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D  A +  F E   DAV+H A +  +        ++  N+   T  VL++ A  GV  ++
Sbjct: 51  DPAAADV-FREREADAVVHLAFI--LDPPRDGAERHRINVDG-TQNVLDACAAAGVPRVV 106

Query: 193 YSSTCATYG--EPEKMPITEETP--QAPINPYGKAKKMAEDIILDFSK-NSDMAVMILRY 247
            +S+ A YG       P+TE+ P   +P   Y + K   E ++ +F + + ++ V +LR 
Sbjct: 107 VTSSVAVYGAHPDNPAPLTEDAPLRGSPEFAYSRDKAEVEQLLAEFRRRHPELNVTVLRP 166

Query: 248 FNVIG 252
             ++G
Sbjct: 167 ATILG 171

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|165812 PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase

 Score = 66.6 bits (162), Expect = 2e-12
 Identities = 56/186 (30%), Positives = 85/186 (45%), Gaps = 19/186 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           ++VTGGAG++GSH   +L+     V ++DN   G     + L  LF  P R + I  D+ 
Sbjct: 123 IVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGR---KENLVHLFGNP-RFELIRHDV- 177

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
               V     E   D + H A  A       +P+K        TL +L    R G   L+
Sbjct: 178 ----VEPILLE--VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLL 231

Query: 193 YSSTCATYGEPEKMPITEETPQAPINP------YGKAKKMAEDIILDFSKNSDMAVMILR 246
            +ST   YG+P + P  +ET    +NP      Y + K+ AE + +D+ + + + V I R
Sbjct: 232 -TSTSEVYGDPLEHP-QKETYWGNVNPIGERSCYDEGKRTAETLAMDYHRGAGVEVRIAR 289

Query: 247 YFNVIG 252
            FN  G
Sbjct: 290 IFNTYG 295

Length = 436

>gnl|CDD|185103 PRK15181, PRK15181, Vi polysaccharide biosynthesis protein TviC; Provisional

 Score = 65.5 bits (159), Expect = 4e-12
 Identities = 58/191 (30%), Positives = 89/191 (46%), Gaps = 12/191 (6%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG---NIGAVK--VLQELFPEPGRLQFIY 128
           L+TG AG+IGS     LL  +  V  +DN S G   N+  V+  V +E +    R  FI 
Sbjct: 19  LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQW---SRFIFIQ 75

Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            D+       K  +    D V+H AA+  V  S  DP+          L +L +     V
Sbjct: 76  GDIRKFTDCQK--ACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHV 133

Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYF 248
            +  Y+++ +TYG+   +P  EE    P++PY   K + E     F+++ +   + LRYF
Sbjct: 134 SSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYF 193

Query: 249 NVIG--SDPEG 257
           NV G   +P G
Sbjct: 194 NVFGRRQNPNG 204

Length = 348

>gnl|CDD|224014 COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

 Score = 65.5 bits (160), Expect = 4e-12
 Identities = 48/155 (30%), Positives = 69/155 (44%), Gaps = 5/155 (3%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           L+TG  G  GS+ A  LL+  Y V  I    S  N   + + ++      RL   Y DL 
Sbjct: 6   LITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLT 65

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH--GVDT 190
           D+  + +   E   D + + AA ++VG S   P          TL +LE++ R      T
Sbjct: 66  DSSNLLRILEEVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAI-RILGEKKT 124

Query: 191 LIYS-STCATYGEPEKMPITEETPQAPINPYGKAK 224
             Y  ST   YG  +++P  E TP  P +PY  AK
Sbjct: 125 RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK 159

Length = 345

>gnl|CDD|236649 PRK10084, PRK10084, dTDP-glucose 4,6 dehydratase; Provisional

 Score = 64.4 bits (157), Expect = 1e-11
 Identities = 53/174 (30%), Positives = 86/174 (49%), Gaps = 27/174 (15%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIYAD 130
           +LVTGGAG+IGS     ++ ++   V  VD L+  GN+ ++  + +      R  F +AD
Sbjct: 3   ILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSD----SERYVFEHAD 58

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           + D   +++ F+++  DAVMH AA ++V  S   P  +       T V+LE+ AR+    
Sbjct: 59  ICDRAELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEA-ARNYWSA 117

Query: 191 LI----------YSSTCATYGE---------PEKMPI-TEETPQAPINPYGKAK 224
           L           + ST   YG+          E++P+ TE T  AP +PY  +K
Sbjct: 118 LDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTAYAPSSPYSASK 171

Length = 352

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score = 63.9 bits (156), Expect = 1e-11
 Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 21/179 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
           VLVTG  G++GS     LL+     RV +     R N+  + V           + +  D
Sbjct: 3   VLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDV-----------EIVEGD 51

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           L D  ++ K  +     A+ H AA   +     DP + Y      T  +L +    GV+ 
Sbjct: 52  LRDPASLRKAVA--GCRALFHVAADYRLW--APDPEEMYAANVEGTRNLLRAALEAGVER 107

Query: 191 LIYSSTCATYGEPEKMPITEETPQAP----INPYGKAKKMAEDIILDFSKNSDMAVMIL 245
           ++Y+S+ AT G        +ET  +     I  Y ++K +AE   L+ +    + V+I+
Sbjct: 108 VVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAEKGLPVVIV 166

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|177856 PLN02206, PLN02206, UDP-glucuronate decarboxylase

 Score = 63.8 bits (155), Expect = 2e-11
 Identities = 57/186 (30%), Positives = 82/186 (44%), Gaps = 19/186 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V+VTGGAG++GSH   RL+     V +VDN   G    V      F  P   + I  D+ 
Sbjct: 122 VVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENV---MHHFSNP-NFELIRHDV- 176

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
               V     E   D + H A  A       +P+K        TL +L    R G   L+
Sbjct: 177 ----VEPILLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL 230

Query: 193 YSSTCATYGEPEKMPITEETPQAPINP------YGKAKKMAEDIILDFSKNSDMAVMILR 246
            +ST   YG+P + P   ET    +NP      Y + K+ AE + +D+ + +++ V I R
Sbjct: 231 -TSTSEVYGDPLQHPQV-ETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIAR 288

Query: 247 YFNVIG 252
            FN  G
Sbjct: 289 IFNTYG 294

Length = 442

>gnl|CDD|182313 PRK10217, PRK10217, dTDP-glucose 4,6-dehydratase; Provisional

 Score = 62.7 bits (152), Expect = 4e-11
 Identities = 52/175 (29%), Positives = 81/175 (46%), Gaps = 23/175 (13%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS-RGNIGAVKVLQELFP--EPGRLQFIY 128
           +L+TGGAG+IGS     ++ ++   V +VD L+  GN      L  L P  +  R  F  
Sbjct: 4   ILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGN------LMSLAPVAQSERFAFEK 57

Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            D+ D   + + F+E+  D VMH AA ++V  S   P  +       T  +LE+ AR   
Sbjct: 58  VDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA-ARAYW 116

Query: 189 DTLI----------YSSTCATYGEPEKMP--ITEETPQAPINPYGKAKKMAEDII 231
           + L           + ST   YG+        TE TP AP +PY  +K  ++ ++
Sbjct: 117 NALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171

Length = 355

>gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein

 Score = 62.1 bits (152), Expect = 4e-11
 Identities = 53/194 (27%), Positives = 85/194 (43%), Gaps = 37/194 (19%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG--RLQFIYAD 130
           VLVTGG G IGS    ++LK + +  I+   SR      ++ QEL  E    +L+F   D
Sbjct: 1   VLVTGGGGSIGSELCRQILKFNPKKIIL--FSRDEFKLYEIRQELRQEYNDPKLRFFIGD 58

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-------NITSNTLVVLESM 183
           + D + + +   ++  D V H AA+ +V      PL  Y+       N+   T  V E+ 
Sbjct: 59  VRDRERLERAMEQHGVDTVFHAAALKHV------PLVEYNPMEAIKTNVLG-TENVAEAA 111

Query: 184 ARHGVDTLIYSST-CATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS---D 239
             +GV+  +  ST  A                 P N  G  K++AE +    ++ S    
Sbjct: 112 IENGVEKFVLISTDKAVN---------------PTNVMGATKRLAEKLFQAANRESGSGK 156

Query: 240 MAVMILRYFNVIGS 253
               ++R+ NV+GS
Sbjct: 157 TRFSVVRFGNVLGS 170

This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 59.7 bits (145), Expect = 7e-11
 Identities = 39/166 (23%), Positives = 64/166 (38%), Gaps = 28/166 (16%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+ G  G+IG   A  LL+  + VT++   ++        L +   EP  +     DL 
Sbjct: 1   ILILGATGFIGRALARELLEQGHEVTLLVRNTKR-------LSKEDQEPVAVVEG--DLR 51

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMARHGVD 189
           D  +++        D V+H A                     +   T  VLE+    GV 
Sbjct: 52  DLDSLSDAVQGV--DVVIHLAGAPRDTR---------DFCEVDVEGTRNVLEAAKEAGVK 100

Query: 190 TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFS 235
             I+ S+   YG+       EET  +P +PY   K   E ++ + S
Sbjct: 101 HFIFISSLGAYGDL-----HEETEPSPSSPYLAVKAKTEAVLREAS 141

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 58.8 bits (143), Expect = 3e-10
 Identities = 45/196 (22%), Positives = 74/196 (37%), Gaps = 41/196 (20%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+ GG  +IG      LL   + VT+    +RG              P  ++ I  D  
Sbjct: 3   ILIIGGTRFIGKALVEELLAAGHDVTV---FNRGRTKP--------DLPEGVEHIVGDRN 51

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D  A+ +      FD V+    +AY                      L++     V   I
Sbjct: 52  DRDALEELLGGEDFDVVVDT--IAYTPRQVER--------------ALDAFKGR-VKQYI 94

Query: 193 YSSTCATYGEPEKMPITEETP--------QAPINPYGKAKKMAEDIILDFSKNSDMAVMI 244
           + S+ + Y +P +  ITE TP         +    YG+ K+ AED++++ +        I
Sbjct: 95  FISSASVYLKPGR-VITESTPLREPDAVGLSDPWDYGRGKRAAEDVLIEAAA---FPYTI 150

Query: 245 LRYFNVIGS-DPEGRL 259
           +R   + G  D  GRL
Sbjct: 151 VRPPYIYGPGDYTGRL 166

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 59.4 bits (144), Expect = 4e-10
 Identities = 45/189 (23%), Positives = 76/189 (40%), Gaps = 26/189 (13%)

Query: 73  VLVTGGAGYIGSHAALRLL-KDSYRVTIVD-NLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
           VLVTGG+G+ G     +LL +    V   D       + A +           ++F+  D
Sbjct: 2   VLVTGGSGFFGERLVKQLLERGGTYVRSFDIAPPGEALSAWQHPN--------IEFLKGD 53

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           + D   V +  + +  D V H AA   V  +    L +  N+   T  VL++  R GV  
Sbjct: 54  ITDRNDVEQ--ALSGADCVFHTAA--IVPLAGPRDLYWEVNVGG-TQNVLDACQRCGVQK 108

Query: 191 LIYSSTCATYG-------EPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVM 243
            +Y+S+ +            E +P          + Y + K +AE I+L+ +   D+   
Sbjct: 109 FVYTSSSSVIFGGQNIHNGDETLPYPPL----DSDMYAETKAIAEIIVLEANGRDDLLTC 164

Query: 244 ILRYFNVIG 252
            LR   + G
Sbjct: 165 ALRPAGIFG 173

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|187565 cd05255, SQD1_like_SDR_e, UDP_sulfoquinovose_synthase (Arabidopsis thaliana SQD1 and related proteins), extended (e) SDRs

 Score = 58.9 bits (143), Expect = 6e-10
 Identities = 49/156 (31%), Positives = 65/156 (41%), Gaps = 19/156 (12%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG---RLQ---- 125
           VL+ GG GY G   AL L K  + V IVDNL R  I     L+ L P      RL+    
Sbjct: 3   VLILGGDGYCGWPTALHLSKRGHEVCIVDNLVRRRIDVELGLESLTPIASIHERLRAWKE 62

Query: 126 -------FIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLD-PLKYY--HNITSN 175
                  F   D  D + + +  + +  DAV+HFA       S +D     Y  HN    
Sbjct: 63  LTGKTIEFYVGDACDYEFLAELLASHEPDAVVHFAEQRSAPYSMIDREHANYTQHNNVIG 122

Query: 176 TLVVLESMARHGVDT-LIYSSTCATYGEPEKMPITE 210
           TL +L ++     D  L+   T   YG P  + I E
Sbjct: 123 TLNLLFAIKEFDPDCHLVKLGTMGEYGTPN-IDIPE 157

Arabidopsis thaliana UDP-sulfoquinovose-synthase ( SQD1), an extended SDR, catalyzes the transfer of SO(3)(-) to UDP-glucose in the biosynthesis of plant sulfolipids. Members of this subgroup share the conserved SDR catalytic residues, and a partial match to the characteristic extended-SDR NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 382

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score = 57.6 bits (139), Expect = 1e-09
 Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 21/196 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRV-TIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           VLVTG +G++ SH   +LL+  Y+V   V + S   +  V  L +L  +PGRL+   ADL
Sbjct: 1   VLVTGASGFVASHVVEQLLERGYKVRATVRDPS--KVKKVNHLLDLDAKPGRLELAVADL 58

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDT 190
            D ++ ++     A   V H A    V  S+ DP +        TL  L++ A    V  
Sbjct: 59  TDEQSFDEVIKGCAG--VFHVATP--VSFSSKDPNEVIKPAIGGTLNALKAAAAAKSVKR 114

Query: 191 LIYSSTCATYGEPE---KMPITEE----------TPQAPINPYGKAKKMAEDIILDFSKN 237
            + +S+  +   P+   +  + +E           P+     Y  +K +AE     F+  
Sbjct: 115 FVLTSSAGSVLIPKPNVEGIVLDEKSWNLEEFDSDPKKSAWVYAASKTLAEKAAWKFADE 174

Query: 238 SDMAVMILRYFNVIGS 253
           +++ ++ +     IG+
Sbjct: 175 NNIDLITVIPTLTIGT 190

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score = 57.3 bits (139), Expect = 1e-09
 Identities = 43/178 (24%), Positives = 65/178 (36%), Gaps = 33/178 (18%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TG  G +G      L +  Y V       R      K+                DL 
Sbjct: 2   ILITGATGMLGRALVRLLKERGYEVI---GTGRSRASLFKL----------------DLT 42

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMARHGVD 189
           D  AV +   +   D +++ AA   V +   DP         N      +  +    G  
Sbjct: 43  DPDAVEEAIRDYKPDVIINCAAYTRVDKCESDPEL---AYRVNVLAPENLARAAKEVGA- 98

Query: 190 TLIYSST-CATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
            LI+ ST     G+  K P  EE    P+N YGK+K + E  +L+ +       +ILR
Sbjct: 99  RLIHISTDYVFDGK--KGPYKEEDAPNPLNVYGKSKLLGEVAVLNANPRY----LILR 150

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 56.6 bits (137), Expect = 3e-09
 Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 24/168 (14%)

Query: 73  VLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            LV GG+G++G H   +LL+     V + D             +      GR+QF   DL
Sbjct: 2   CLVVGGSGFLGRHLVEQLLRRGNPTVHVFD--------IRPTFELDPSSSGRVQFHTGDL 53

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            D + + K F+E   + V H A+         +   YY      T  V+E+  + GV  L
Sbjct: 54  TDPQDLEKAFNEKGPNVVFHTASPD----HGSNDDLYYKVNVQGTRNVIEACRKCGVKKL 109

Query: 192 IYSSTCATY--GEP-----EKMPITEETPQAPINPYGKAKKMAEDIIL 232
           +Y+S+ +    G+      E +P     P    + Y + K +AE ++L
Sbjct: 110 VYTSSASVVFNGQDIINGDESLPY----PDKHQDAYNETKALAEKLVL 153

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|200085 TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase

 Score = 56.3 bits (136), Expect = 3e-09
 Identities = 48/226 (21%), Positives = 78/226 (34%), Gaps = 38/226 (16%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TG  G +G     +L  +  RV +    S+                        DL 
Sbjct: 2   ILITGANGQLGRELVQQLSPE-GRVVVALTRSQ-----------------------LDLT 37

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D +A+ +       DAV++ AA   V  +  DP K +         +  + ARHG   L+
Sbjct: 38  DPEALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGAR-LV 96

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIG 252
           + ST   +    K P  E+    P+N YG++K   E  +     N+    +I+R   + G
Sbjct: 97  HISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAVRAAGPNA----LIVRTSWLYG 152

Query: 253 SDPEGRLGEAPRPELREHGRIS---------GACFDAARGIIAGLK 289
                               +              D AR I A L+
Sbjct: 153 GGGGRNFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQ 198

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 287

>gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

 Score = 56.1 bits (136), Expect = 4e-09
 Identities = 38/176 (21%), Positives = 64/176 (36%), Gaps = 32/176 (18%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            +L+TG  G +G+    R L   + V       R  +                     D+
Sbjct: 2   KILITGANGQLGTELR-RALPGEFEVIA---TDRAEL---------------------DI 36

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGVDT 190
            D  AV +   E   D V++ AA   V ++  +P   +  N T     +  + A  G   
Sbjct: 37  TDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATG-AENLARAAAEVGA-R 94

Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
           L++ ST   +   +  P  E     P+N YG++K   E+ +           +ILR
Sbjct: 95  LVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAAGPRH----LILR 146

Length = 281

>gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs

 Score = 55.3 bits (134), Expect = 7e-09
 Identities = 44/164 (26%), Positives = 65/164 (39%), Gaps = 37/164 (22%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTG  G +GS     L +  Y   +    +          +EL            DL 
Sbjct: 2   ILVTGHRGLVGSAIVRVLARRGYENVVF--RTS---------KEL------------DLT 38

Query: 133 DAKAVNKFFSENAFDAVMHFAA-VAYVGESTLDPLKYYHNITSNTLV---VLESMARHGV 188
           D +AV  FF +   D V+H AA V  +  +   P  +  +   N L+   V+ +  R GV
Sbjct: 39  DQEAVRAFFEKEKPDYVIHLAAKVGGIVANMTYPADFLRD---NLLINDNVIHAAHRFGV 95

Query: 189 DTLIY-SSTCATYGEPEKMPITEET----PQAPIN-PYGKAKKM 226
             L++  S+C  Y +    PI E      P  P N  Y  AK+ 
Sbjct: 96  KKLVFLGSSC-IYPDLAPQPIDESDLLTGPPEPTNEGYAIAKRA 138

GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score = 54.9 bits (133), Expect = 1e-08
 Identities = 41/137 (29%), Positives = 59/137 (43%), Gaps = 23/137 (16%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRV-TIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           V VTG +G+IGS    RLL+  Y V   V +   G+   V  L EL     RL+   ADL
Sbjct: 1   VCVTGASGFIGSWLVKRLLQRGYTVRATVRDP--GDEKKVAHLLELEGAKERLKLFKADL 58

Query: 132 GDAKAVNKFFSENAFD---AVMHFAA-----VAYVGESTLDPLKYYHNITSNTLVVLESM 183
            D  +      + A D    V H A+          E  ++P          TL VLE+ 
Sbjct: 59  LDYGSF-----DAAIDGCDGVFHVASPVDFDSEDPEEEMIEP------AVKGTLNVLEAC 107

Query: 184 AR-HGVDTLIYSSTCAT 199
           A+   V  ++++S+ A 
Sbjct: 108 AKAKSVKRVVFTSSVAA 124

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 54.3 bits (131), Expect = 1e-08
 Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 39/178 (21%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVL-----QELFPEPGRLQ--- 125
           LVTGG G++G H    LL+             G +  V+V       EL  +  +LQ   
Sbjct: 1   LVTGGGGFLGRHIVRLLLR------------EGELQEVRVFDLRFSPELLEDFSKLQVIT 48

Query: 126 FIYADLGDAKAVNKFFSENAFDAVMHFAAVAYV-GESTLDPLKYYHNITSNTLVVLESMA 184
           +I  D+ D + + +  +    D V+H AA+  V G++  D           T  VL++  
Sbjct: 49  YIEGDVTDKQDLRR--ALQGSDVVIHTAAIIDVFGKAYRD--TIMKVNVKGTQNVLDACV 104

Query: 185 RHGVDTLIYSSTCA-----TYGEP-----EKMPITEETPQAPINPYGKAKKMAEDIIL 232
           + GV  L+Y+S+       +YG+P     E  P  E T Q    PY ++K +AE ++L
Sbjct: 105 KAGVRVLVYTSSMEVVGPNSYGQPIVNGDETTPY-ESTHQD---PYPESKALAEKLVL 158

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 54.3 bits (131), Expect = 2e-08
 Identities = 52/197 (26%), Positives = 75/197 (38%), Gaps = 22/197 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V VTGG G++G H   RLL++ ++V +   L R      +  + +         +    G
Sbjct: 1   VFVTGGTGFLGRHLVKRLLENGFKVLV---LVRSE-SLGEAHERIEEAGLEADRVRVLEG 56

Query: 133 DAKAVNKFFSENAF-------DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMAR 185
           D    N   S  A        D V+H AA         D   +  NI   T  VLE  AR
Sbjct: 57  DLTQPNLGLSAAASRELAGKVDHVIHCAASYDFQAPNEDA--WRTNIDG-TEHVLELAAR 113

Query: 186 HGVDTLIYSSTCATYGEPEKMPITEET----PQAPINPYGKAKKMAEDIILDFSKNSDMA 241
             +    Y ST    G  E      ET     Q   NPY ++K  AE ++   +    + 
Sbjct: 114 LDIQRFHYVSTAYVAGNRE--GNIRETELNPGQNFKNPYEQSKAEAEQLVRAAAT--QIP 169

Query: 242 VMILRYFNVIGSDPEGR 258
           + + R   V+G    GR
Sbjct: 170 LTVYRPSIVVGDSKTGR 186

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 51.9 bits (125), Expect = 1e-07
 Identities = 48/193 (24%), Positives = 77/193 (39%), Gaps = 19/193 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVT--IVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
           VLVTG  G+ GS  +L L +   +V    +D  +  N+  +  L         +     D
Sbjct: 7   VLVTGHTGFKGSWLSLWLQELGAKVIGYSLDPPTNPNLFELANLDNK------ISSTRGD 60

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VD 189
           + D  A+ +   E   + V H AA   V  S  DP++ +      T+ +LE++   G V 
Sbjct: 61  IRDLNALREAIREYEPEIVFHLAAQPLVRLSYKDPVETFETNVMGTVNLLEAIRETGSVK 120

Query: 190 TLIYSSTCATYGEPEKM-PITEETPQAPINPYGKAKKMAEDIILDFSK---------NSD 239
            ++  ++   Y   E      E  P    +PY  +K  AE II  +              
Sbjct: 121 AVVNVTSDKCYENKEWGWGYRENDPLGGHDPYSSSKGCAELIISSYRNSFFNPENYGKHG 180

Query: 240 MAVMILRYFNVIG 252
           +A+   R  NVIG
Sbjct: 181 IAIASARAGNVIG 193

This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336

>gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs

 Score = 51.4 bits (123), Expect = 2e-07
 Identities = 44/172 (25%), Positives = 69/172 (40%), Gaps = 23/172 (13%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYR---VTIVDN-LSRGNIGAVKVLQELFPEPGRLQFIYA 129
           LVTGG G++G H    LL+       + ++D       I       E       +  I  
Sbjct: 3   LVTGGGGFLGQHIIRLLLERKEELKEIRVLDKAFGPELIE----HFEKSQGKTYVTDIEG 58

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKY--YHNITSN-TLVVLESMARH 186
           D+ D   +  F +      V+H AA+         P  Y     +  N T  VLE+  ++
Sbjct: 59  DIKDLSFL--FRACQGVSVVIHTAAIV----DVFGPPNYEELEEVNVNGTQAVLEACVQN 112

Query: 187 GVDTLIYSSTCATYGEPEKMPIT----EETPQAPIN--PYGKAKKMAEDIIL 232
            V  L+Y+S+    G   K        E+TP    +  PY  +K +AE+I+L
Sbjct: 113 NVKRLVYTSSIEVAGPNFKGRPIFNGVEDTPYEDTSTPPYASSKLLAENIVL 164

This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354

>gnl|CDD|233427 TIGR01472, gmd, GDP-mannose 4,6-dehydratase

 Score = 51.4 bits (123), Expect = 2e-07
 Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 12/170 (7%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRV-TIVDNLSRGNIGAVKVLQELFPEP-----GRLQFI 127
           L+TG  G  GS+ A  LL+  Y V  ++   S  N      ++ ++ +P      R++  
Sbjct: 4   LITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQR---IEHIYEDPHNVNKARMKLH 60

Query: 128 YADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESM--AR 185
           Y DL D+  + +   E     + + AA ++V  S   P          TL +LE++    
Sbjct: 61  YGDLTDSSNLRRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLG 120

Query: 186 HGVDTLIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDF 234
                  Y +ST   YG+ +++P  E TP  P +PY  AK  A  I +++
Sbjct: 121 LIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAKLYAHWITVNY 170

Alternate name: GDP-D-mannose dehydratase. This enzyme converts GDP-mannose to GDP-4-dehydro-6-deoxy-D-mannose, the first of three steps for the conversion of GDP-mannose to GDP-fucose in animals, plants, and bacteria. In bacteria, GDP-L-fucose acts as a precursor of surface antigens such as the extracellular polysaccharide colanic acid of E. coli. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 343

>gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain

 Score = 50.3 bits (121), Expect = 3e-07
 Identities = 57/225 (25%), Positives = 83/225 (36%), Gaps = 43/225 (19%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTG  G +G     RLL +     +                       R +    DL 
Sbjct: 1   ILVTGANGQLGR-ELTRLLAERGVEVVA--------------------LDRPEL---DLT 36

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGVDTL 191
           D +AV     E   D V++ AA   V ++  +P   Y  N       + E+ A  G   L
Sbjct: 37  DPEAVAALVREARPDVVVNAAAYTAVDKAESEPELAYAVNALG-PGNLAEACAARGA-PL 94

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVI 251
           I+ ST   +   +  P  E+ P  P+N YG+ K   E  +L  +       +ILR   V 
Sbjct: 95  IHISTDYVFDGAKGGPYREDDPTGPLNVYGRTKLAGEQAVLAANPRH----LILRTAWVY 150

Query: 252 GSDPEG------RLGEAPRPELR----EHGRISGACFDAARGIIA 286
           G           RL    R ELR    + G  + A  D A  ++A
Sbjct: 151 GEYGNNFVKTMLRLAAE-RDELRVVDDQLGSPTSA-RDLADALLA 193

L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score = 49.2 bits (118), Expect = 6e-07
 Identities = 31/146 (21%), Positives = 55/146 (37%), Gaps = 18/146 (12%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG +  IG   A RL ++  +V + D  +   +  +  ++      G    + AD+ 
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLAD-RNEEALAELAAIEA---LGGNAVAVQADVS 56

Query: 133 DAKAVNKFFSE--NAF---DAVMHFAAVAYVGESTLDPLKYY-----HNITSNTLV---V 179
           D + V     E    F   D +++ A +A  G       + +      N+T   L+    
Sbjct: 57  DEEDVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAA 116

Query: 180 LESMARHGVDTLIY-SSTCATYGEPE 204
           L  M + G   ++  SS       P 
Sbjct: 117 LPHMKKQGGGRIVNISSVAGLRPLPG 142

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 48.6 bits (117), Expect = 8e-07
 Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 9/88 (10%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
             LVTG +  IG   ALRL  D  +V I D        A  +  EL    G  + +  D+
Sbjct: 7   TALVTGASRGIGRAIALRLAADGAKVVIYD---SNEEAAEALAAELRAAGGEARVLVFDV 63

Query: 132 GDAKAVNKFFSENAFDAVM-HFAAVAYV 158
            D  AV         +A +  F A+  +
Sbjct: 64  SDEAAV-----RALIEAAVEAFGALDIL 86

Length = 246

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 48.3 bits (116), Expect = 1e-06
 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 4/67 (5%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYAD 130
             LVTG A  +G   ALRL +    V +     R +  A + L E     G R Q + AD
Sbjct: 8   VALVTGAARGLGRAIALRLARAGADVVVH---YRSDEEAAEELVEAVEALGRRAQAVQAD 64

Query: 131 LGDAKAV 137
           + D  A+
Sbjct: 65  VTDKAAL 71

Length = 249

>gnl|CDD|182998 PRK11150, rfaD, ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

 Score = 48.2 bits (115), Expect = 2e-06
 Identities = 48/187 (25%), Positives = 77/187 (41%), Gaps = 23/187 (12%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA-- 129
           ++VTGGAG+IGS+    L       + +VDNL  G      V  ++     +  F+    
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLDIADYMDKEDFLAQIM 61

Query: 130 ---DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKY-YHNITSNTLVVLESMAR 185
              D GD +A+   F E A  +   +              KY   N    +  +L     
Sbjct: 62  AGDDFGDIEAI---FHEGACSSTTEWDG------------KYMMDNNYQYSKELLHYCLE 106

Query: 186 HGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMIL 245
             +  L Y+S+ ATYG      I E   + P+N YG +K + ++ +      ++  +   
Sbjct: 107 REIPFL-YASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFDEYVRQILPEANSQICGF 165

Query: 246 RYFNVIG 252
           RYFNV G
Sbjct: 166 RYFNVYG 172

Length = 308

>gnl|CDD|178259 PLN02653, PLN02653, GDP-mannose 4,6-dehydratase

 Score = 47.1 bits (112), Expect = 4e-06
 Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 10/175 (5%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRV-TIVDNLSRGNIGAVK-VLQELFPEPGRLQFIYADL 131
           L+TG  G  GS+    LL   Y V  I+   S  N   +  +  +  P   R++  Y DL
Sbjct: 10  LITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDL 69

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            DA ++ ++  +   D V + AA ++V  S   P      + +  L +LE++  HG +T 
Sbjct: 70  SDASSLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETG 129

Query: 192 IY-----SSTCATYGE-PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
                  + +   YG  P   P +E TP  P +PY  AK  A    +++ +   +
Sbjct: 130 RQIKYYQAGSSEMYGSTPP--PQSETTPFHPRSPYAVAKVAAHWYTVNYREAYGL 182

Length = 340

>gnl|CDD|132628 TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehydratase

 Score = 46.6 bits (111), Expect = 5e-06
 Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 26/186 (13%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TGG G  G     RLL++ Y    +   SR  +   + +Q+ FP P  L+F   D+ 
Sbjct: 7   ILITGGTGSFGKAFISRLLEN-YNPKKIIIYSRDELKQWE-MQQKFPAP-CLRFFIGDVR 63

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGVDTL 191
           D + + +       D V+H AA+  V  +  +P +    NI     V+  ++   GV  +
Sbjct: 64  DKERLTRAL--RGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDN-GVKRV 120

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIIL----DFSKNSDMAVMILRY 247
           +  ST              +    PIN YG A K+A D +     + S +      ++RY
Sbjct: 121 VALST--------------DKAANPINLYG-ATKLASDKLFVAANNISGSKGTRFSVVRY 165

Query: 248 FNVIGS 253
            NV+GS
Sbjct: 166 GNVVGS 171

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. Length = 324

>gnl|CDD|178298 PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase

 Score = 46.7 bits (111), Expect = 6e-06
 Identities = 45/194 (23%), Positives = 79/194 (40%), Gaps = 32/194 (16%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL- 131
           + +TG  G+I SH A RL  + + +   D     ++      +++F      +F   DL 
Sbjct: 24  ICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMS-----EDMFCH----EFHLVDLR 74

Query: 132 --GDAKAVNKFFSENAFDAVMHFAA-VAYVG--ESTLDPLKYYHNITSNTLVVLESMARH 186
              +   V K       D V + AA +  +G  +S    + Y  N T  +  +LE+   +
Sbjct: 75  VMENCLKVTK-----GVDHVFNLAADMGGMGFIQSNHSVIMY--NNTMISFNMLEAARIN 127

Query: 187 GVDTLIYSSTCATYGEPEKMPITEET--------PQAPINPYGKAKKMAEDIILDFSKNS 238
           GV    Y+S+   Y  PE   +            P  P + YG  K   E++   ++K+ 
Sbjct: 128 GVKRFFYASSACIY--PEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDF 185

Query: 239 DMAVMILRYFNVIG 252
            +   I R+ N+ G
Sbjct: 186 GIECRIGRFHNIYG 199

Length = 370

>gnl|CDD|187672 cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid dehydrogenase (3b-HSD)-like, subgroup1, extended (e) SDRs

 Score = 46.7 bits (111), Expect = 6e-06
 Identities = 44/165 (26%), Positives = 65/165 (39%), Gaps = 18/165 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VL+TGG GY G      L K    V + D          +  QEL      ++FI AD+ 
Sbjct: 2   VLITGGGGYFGFRLGCALAKSGVHVILFD--------IRRPQQELPEG---IKFIQADVR 50

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D   + K  +    D V H A+    G   L+           T  +++   R  V  LI
Sbjct: 51  DLSQLEKAVA--GVDCVFHIASYGMSGREQLNRELIEEINVRGTENIIQVCVRRRVPRLI 108

Query: 193 YSSTC-ATYGEPEKMPITEETPQAP----INPYGKAKKMAEDIIL 232
           Y+ST    +G        E  P  P    ++ Y + K +AE ++L
Sbjct: 109 YTSTFNVIFGGQPIRNGDESLPYLPLDLHVDHYSRTKSIAEQLVL 153

An uncharacterized subgroup of the 3b-HSD-like extended-SDR family. Proteins in this subgroup have the characteristic active site tetrad and NAD(P)-binding motif of extended-SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 339

>gnl|CDD|215310 PLN02572, PLN02572, UDP-sulfoquinovose synthase

 Score = 45.9 bits (109), Expect = 1e-05
 Identities = 43/151 (28%), Positives = 58/151 (38%), Gaps = 18/151 (11%)

Query: 71  THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-------- 122
             V+V GG GY G   AL L K  Y V IVDNL R        L  L P           
Sbjct: 48  KKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRW 107

Query: 123 ------RLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN- 175
                  ++    D+ D + +++ F     DAV+HF        S +D  +      +N 
Sbjct: 108 KEVSGKEIELYVGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNV 167

Query: 176 --TLVVLESMARHGVDT-LIYSSTCATYGEP 203
             TL VL ++     D  L+   T   YG P
Sbjct: 168 IGTLNVLFAIKEFAPDCHLVKLGTMGEYGTP 198

Length = 442

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 40/174 (22%), Positives = 62/174 (35%), Gaps = 22/174 (12%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
             V G +G IG   A  L +  + V +V                       ++ + AD  
Sbjct: 2   AHVLGASGPIGREVARELRRRGWDVRLVSRSGSKL-----------AWLPGVEIVAADAM 50

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           DA +V    +  A D + H A  AY     L P      +  N +    + A      L+
Sbjct: 51  DASSVIAA-ARGA-DVIYHCANPAYTRWEELFP-----PLMENVV----AAAEANGAKLV 99

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
                  YG     PITE+TP  P    G+ +   E+ +L      D+  +I+R
Sbjct: 100 LPGNVYMYGPQAGSPITEDTPFQPTTRKGRIRAEMEERLLAAHAKGDIRALIVR 153

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|187580 cd05272, TDH_SDR_e, L-threonine dehydrogenase, extended (e) SDRs

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 45/164 (27%), Positives = 67/164 (40%), Gaps = 26/164 (15%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQ-----FI 127
           +L+TGG G IGS  A  LL+  Y             G   V+     +P         F 
Sbjct: 2   ILITGGLGQIGSELAK-LLRKRY-------------GKDNVIASDIRKPPAHVVLSGPFE 47

Query: 128 YADLGDAKAVNKFFSENAFDAVMHFAAV-AYVGESTLDPLKYYHNITSNTLVVLESMARH 186
           Y D+ D K++ +    +    ++H AA+ + VGE    PL +  N+      VLE    H
Sbjct: 48  YLDVLDFKSLEEIVVNHKITWIIHLAALLSAVGEKNP-PLAWDVNMNG-LHNVLELAREH 105

Query: 187 GVDTLIYSSTCATYGEPE--KMPITEETPQAPINPYGKAKKMAE 228
               +   ST   +G P   +    ++T Q P   YG +K  AE
Sbjct: 106 N-LRIFVPSTIGAFG-PTTPRNNTPDDTIQRPRTIYGVSKVAAE 147

This subgroup contains members identified as L-threonine dehydrogenase (TDH). TDH catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. This group is distinct from TDHs that are members of the medium chain dehydrogenase/reductase family. This group has the NAD-binding motif and active site tetrad of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 308

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 26/99 (26%), Positives = 36/99 (36%), Gaps = 8/99 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG A  IG   A  L  + YRV +  N S     A ++  EL         + ADL 
Sbjct: 3   ALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEA--EAQRLKDELNALRNSAVLVQADLS 60

Query: 133 DAKA----VNKFFSE-NAFDAVMHFAAVAYVGESTLDPL 166
           D  A    V   F      D +++ A+  +         
Sbjct: 61  DFAACADLVAAAFRAFGRCDVLVNNASA-FYPTPLGQGS 98

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 43.8 bits (104), Expect = 4e-05
 Identities = 40/150 (26%), Positives = 52/150 (34%), Gaps = 31/150 (20%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TGG G+IG     RL K  + VTI   L+R             P PG       +  
Sbjct: 1   ILITGGTGFIGRALTQRLTKRGHEVTI---LTRS------------PPPGANTKW--EGY 43

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPL---KYYHNI------TSNTLVVLESM 183
              A     S    DAV++ A     GE   D     +    I      T+  LV   + 
Sbjct: 44  KPWAGEDADSLEGADAVINLA-----GEPIADKRWTEERKQEIRDSRIDTTRLLVEAIAA 98

Query: 184 ARHGVDTLIYSSTCATYGEPEKMPITEETP 213
           A       I +S    YG  E    TEE  
Sbjct: 99  AEQKPKVFISASAVGYYGPSEDREYTEEDS 128

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 42.7 bits (101), Expect = 6e-05
 Identities = 46/214 (21%), Positives = 71/214 (33%), Gaps = 39/214 (18%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           + V G  G  G      LL   ++VT    LSR    A             +  +  DL 
Sbjct: 1   IAVIGATGKTGRRLVKELLARGHQVTA---LSRNPSKAPAP---------GVTPVQKDLF 48

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D   + +  +    DAV     V   G    D     H        +L++ AR GV  ++
Sbjct: 49  DLADLAEALAG--VDAV-----VDAFGARPDDSDGVKH--------LLDAAARAGVRRIV 93

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIG 252
             S    Y +       ++ P  P  PY +AK  AE+++    + S +   I+R   +  
Sbjct: 94  VVSAAGLYRDEPGTFRLDDAPLFP--PYARAKAAAEELL----RASGLDWTIVRPGALFD 147

Query: 253 SDPEGRLGEAPRPELREHGRIS-----GACFDAA 281
            + E            E   IS      A  D  
Sbjct: 148 EEGETYEIGTEGDPAGE-SSISRADVAAALLDEL 180

Length = 182

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 42.6 bits (101), Expect = 7e-05
 Identities = 42/178 (23%), Positives = 68/178 (38%), Gaps = 36/178 (20%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           VLV G  G +G H    LL   Y+V  +V + S+              E    + +  DL
Sbjct: 2   VLVVGATGKVGRHVVRELLDRGYQVRALVRDPSQAE----------KLEAAGAEVVVGDL 51

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLK--YYHNITSNTLVVLESMARHGVD 189
            DA+++    +    DAV+  AA +  G+         Y  NI      ++++  + GV 
Sbjct: 52  TDAESLAA--ALEGIDAVI-SAAGSG-GKGGPRTEAVDYDGNIN-----LIDAAKKAGVK 102

Query: 190 TLIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
             +  SS  A         +          PY  AK+ AED +    + S +   I+R
Sbjct: 103 RFVLVSSIGADKPSHPLEALG---------PYLDAKRKAEDYL----RASGLDYTIVR 147

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 42.6 bits (101), Expect = 9e-05
 Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 8/90 (8%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
             LVTG A  IG   A+RL  D   V +VD        A    + +    G+ +    D+
Sbjct: 8   VALVTGAARGIGRAIAVRLAADGAEVIVVD---ICGDDAAATAELVEAAGGKARARQVDV 64

Query: 132 GDAKAVNKFFS--ENAF---DAVMHFAAVA 156
            D  A+    +     F   D ++  A + 
Sbjct: 65  RDRAALKAAVAAGVEDFGRLDILVANAGIF 94

Length = 251

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG +  IG   AL+L K+  +V I         GA +V++EL     +   +  D+ 
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVII--TYRSSEEGAEEVVEELKAYGVKALGVVCDVS 58

Query: 133 DAKAVNKFFSE 143
           D + V     E
Sbjct: 59  DREDVKAVVEE 69

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 32/152 (21%), Positives = 46/152 (30%), Gaps = 31/152 (20%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            +++TGG G+IG     RL    + V +   LSR             P            
Sbjct: 1   KIVITGGTGFIGRALTRRLTAAGHEVVV---LSR------------RPGKAEGLAEVITW 45

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPL---KYYHNI------TSNTLVVLES 182
                        A DAV++ A     GE              I      ++  LV   +
Sbjct: 46  DGLSLGPWEL-PGA-DAVINLA-----GEPIACRRWTEANKKEILSSRIESTRVLVEAIA 98

Query: 183 MARHGVDTLIYSSTCATYGEPEKMPITEETPQ 214
            A      LI +S    YG      +TE +P 
Sbjct: 99  NAPAPPKVLISASAVGYYGHSGDEVLTENSPS 130

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 40.8 bits (96), Expect = 4e-04
 Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            ++TG A  IG   A RL  D + + + D        A   +QE+         + AD+ 
Sbjct: 5   AIITGAAQGIGRAIAERLAADGFNIVLADLNL--EEAAKSTIQEISEAGYNAVAVGADVT 62

Query: 133 DAKAVNKFFSENA-----FDAVMHFAAVA 156
           D   V     +       FD +++ A +A
Sbjct: 63  DKDDVEALIDQAVEKFGSFDVMVNNAGIA 91

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 40.6 bits (95), Expect = 4e-04
 Identities = 19/75 (25%), Positives = 30/75 (40%), Gaps = 5/75 (6%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQ--FIYA 129
             LVTG +  IG   A  L ++  RV +     R    A + L     E G  +   + A
Sbjct: 7   VALVTGASSGIGRAIARALAREGARVVVAA--RRSEEEAAEALAAAIKEAGGGRAAAVAA 64

Query: 130 DLGD-AKAVNKFFSE 143
           D+ D  ++V    + 
Sbjct: 65  DVSDDEESVEALVAA 79

Length = 251

>gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 40.8 bits (96), Expect = 5e-04
 Identities = 54/218 (24%), Positives = 78/218 (35%), Gaps = 43/218 (19%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN--IGAVKVLQELFPEPGRLQFIYA 129
           +VL+TG  G++G++  L LL  S    I   L R      A+  L++ F        + A
Sbjct: 2   NVLLTGATGFLGAYLLLELLDRSDAKVIC--LVRAQSDEAALARLEKTFDLYRHWDELSA 59

Query: 130 D-----LGDAKAVNKF-FSE-------NAFDAVMHFAA-VAYVGE-STLDPLKYYHNITS 174
           D      GD  A      SE          D ++H AA V +V   S L          +
Sbjct: 60  DRVEVVAGD-LAEPDLGLSERTWQELAENVDLIIHNAALVNHVFPYSELRG--------A 110

Query: 175 NTLV---VLESMARHGVDTLIYSSTCATYGEPEKMPITEETP----------QAPINPYG 221
           N L    VL   A      L Y S+ +  GE E                   Q     YG
Sbjct: 111 NVLGTAEVLRLAATGKPKPLHYVSSISV-GETEYYSNFTVDFDEISPTRNVGQGLAGGYG 169

Query: 222 KAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRL 259
           ++K +AE ++ +      + V I R   + G    G L
Sbjct: 170 RSKWVAEKLVREAGDRG-LPVTIFRPGYITGDSRTGAL 206

Length = 382

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score = 40.7 bits (96), Expect = 5e-04
 Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 8/88 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V++TG +  +G +AA  L K  + V +     R    A    QEL   P     I+ DLG
Sbjct: 9   VIITGASSGVGLYAAKALAKRGWHVIMA---CRNLKKAEAAAQELGIPPDSYTIIHIDLG 65

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAV 155
           D  +V +F  +        DA++  AAV
Sbjct: 66  DLDSVRRFVDDFRALGKPLDALVCNAAV 93

Length = 322

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 39.9 bits (94), Expect = 6e-04
 Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 15/146 (10%)

Query: 71  THVLVTGGAGYIGSHAALRLLKDSYRVTIVD-NLSRGNIGAVKVLQELFPEPGRLQFIYA 129
            HVL+TGG+  IG   A  L+K+   V IV  + S+      ++  E      ++ +I A
Sbjct: 2   KHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYISA 61

Query: 130 DLGDAKAVNKFFSENAF-----DAVMHFAAVAYVGE-STLDPLKYYHNITSNTL------ 177
           DL D + V + F++        D V++ A ++  G    L   ++   +  N        
Sbjct: 62  DLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGLFEDLTAEEFERGMDVNYFGSLNVA 121

Query: 178 -VVLESM-ARHGVDTLIYSSTCATYG 201
             VL  M  +     +  SS  A  G
Sbjct: 122 HAVLPLMKEQRPGHIVFVSSQAALVG 147

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 39.7 bits (93), Expect = 8e-04
 Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 11/107 (10%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD 133
           LVTGGA  IG   A RL KD + V + D        A +  +E+    G+      D+ D
Sbjct: 4   LVTGGAQGIGKGIAERLAKDGFAVAVAD---LNEETAKETAKEINQAGGKAVAYKLDVSD 60

Query: 134 AKAVNKFFSENA-----FDAVMHFAAVAYVG---ESTLDPLKYYHNI 172
              V     + A     FD +++ A VA +    E T + LK  +N+
Sbjct: 61  KDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNV 107

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase

 Score = 40.1 bits (94), Expect = 0.001
 Identities = 39/141 (27%), Positives = 56/141 (39%), Gaps = 12/141 (8%)

Query: 54  SPTFSSPSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVD---NLSRGNIGA 110
           +   ++   F   E     VLV G  GYIG      L++  Y V  V    +  RG  G 
Sbjct: 44  ATAAAAAQSFRSKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGK 103

Query: 111 VKVLQELFPEPGRLQFIYADLGDAKAVNK-FFSEN-AFDAVMHFAAVAYVGESTLDPLKY 168
               +EL       + ++ D+ DA ++ K  FSE    D V+   A    G    D  K 
Sbjct: 104 EDTKKELPG----AEVVFGDVTDADSLRKVLFSEGDPVDVVVSCLASRTGGVK--DSWKI 157

Query: 169 YHNITSNTLVV-LESMARHGV 188
            +  T N+L    E  A+H V
Sbjct: 158 DYQATKNSLDAGREVGAKHFV 178

Length = 390

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 39.6 bits (93), Expect = 0.001
 Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVT  +  IG   A  L ++  RV I    +R      +   EL      +  + ADL 
Sbjct: 4   ALVTAASSGIGLAIARALAREGARVAI---CARNRENLERAASELRAGGAGVLAVVADLT 60

Query: 133 DAKAVNKFFSE 143
           D + +++   +
Sbjct: 61  DPEDIDRLVEK 71

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 39.3 bits (92), Expect = 0.001
 Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 7/85 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIYADL 131
           VL+TGG+G +G   A+RL  D   V ++D    RG   A  V   +    G+   +  D+
Sbjct: 9   VLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDV 68

Query: 132 GDAKAVNKFFSENAFDA-VMHFAAV 155
            D  A        A DA V  F  +
Sbjct: 69  RDFAAT-----RAALDAGVEEFGRL 88

Length = 249

>gnl|CDD|233954 TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydratase

 Score = 39.6 bits (93), Expect = 0.001
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 9/116 (7%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVT--IVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
           VLVTG  G+ GS  +L LL+    V    +D  +  N      L EL     +++  + D
Sbjct: 7   VLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPN------LFELLNLAKKIEDHFGD 60

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH 186
           + DA  + K  +E   + V H AA   V +S  DPL+ +      T+ +LE+  R 
Sbjct: 61  IRDAAKLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEA-IRA 115

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 349

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 39.1 bits (92), Expect = 0.001
 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG +  IG   ALRL  +  +V + D   R    A + ++E+    G    + AD+ 
Sbjct: 3   ALVTGASRGIGRAIALRLAAEGAKVAVTD---RSEEAAAETVEEIKALGGNAAALEADVS 59

Query: 133 DAKAVNKFFSE 143
           D +AV     +
Sbjct: 60  DREAVEALVEK 70

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 39.2 bits (92), Expect = 0.001
 Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 8/89 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG A  +G+  A  L +    V   D L+     A ++   L    GR   I ADL 
Sbjct: 10  ALVTGAARGLGAAFAEALAEAGATVAFNDGLAA---EARELAAALEAAGGRAHAIAADLA 66

Query: 133 DAKAVNKFFSENA-----FDAVMHFAAVA 156
           D  +V +FF   A      D +++ A + 
Sbjct: 67  DPASVQRFFDAAAAALGGLDGLVNNAGIT 95

Length = 250

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 39.1 bits (92), Expect = 0.001
 Identities = 42/200 (21%), Positives = 76/200 (38%), Gaps = 38/200 (19%)

Query: 75  VTGGAGYIGSHAALRLLKDSYRVTIV----------------DNLSRGNIG-AVKVLQEL 117
           +TG  G++G     +LL+ +  V I                   L +  +   +K L+ +
Sbjct: 1   LTGATGFLGKVLLEKLLRSTPEVKIYCLVRAKDGESALERLRQELLKYGLFDRLKALERI 60

Query: 118 FPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYY--HNITSN 175
            P  G L     +LG +    +  +E   D ++H AA      + ++P       N+   
Sbjct: 61  IPVAGDL--SEPNLGLSDEDFQELAEEV-DVIIHNAATV----NFVEPYSDLRATNVLG- 112

Query: 176 TLVVLESMARHGVDTLIYSSTCATYGE-----PEKMPITEETPQAPI----NPYGKAKKM 226
           T  VL    +       + ST    GE      EK    +E   A +    N Y ++K +
Sbjct: 113 TREVLRLAKQMKKLPFHHVSTAYVNGERGGLLEEKPYKLDEDEPALLGGLPNGYTQSKWL 172

Query: 227 AEDIILDFSKNSDMAVMILR 246
           AE ++ + +    + V+I R
Sbjct: 173 AEQLVREAAGG--LPVVIYR 190

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 45/216 (20%), Positives = 87/216 (40%), Gaps = 41/216 (18%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG--NIGAVKVLQELFPEPG------- 122
            VL+TG  G++G++    LL+ S +  ++  L R      A++ L+E             
Sbjct: 1   TVLLTGATGFLGAYLLEELLRRSTQAKVI-CLVRAASEEHAMERLREALRSYRLWHEDLA 59

Query: 123 --RLQFIYADLG-------DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH--- 170
             R++ +  DL        DA+      +EN  D ++H  A+       ++ +  Y    
Sbjct: 60  RERIEVVAGDLSEPRLGLSDAEWE--RLAENV-DTIVHNGAL-------VNWVYPYSELR 109

Query: 171 --NITSNTLVVLESMARHGVDTLIYSSTCA--TYGEPEKMPITEET---PQAPINPYGKA 223
             N+   T  VL   A      L Y ST +     +   +   + T   P      Y ++
Sbjct: 110 GANVLG-TREVLRLAASGRAKPLHYVSTISVGAAIDLSTVTEDDATVTPPPGLAGGYAQS 168

Query: 224 KKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRL 259
           K +AE +++  + +  + V I+R   ++G+   G +
Sbjct: 169 KWVAE-LLVREASDRGLPVTIVRPGRILGNSYTGAI 203

This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 10/89 (11%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNI-GAVKVLQELFPEPGRLQFIYADLG 132
           LVTG    IG   A RL++D ++V IVD     N   A     +L  + G+   + AD+ 
Sbjct: 6   LVTGAGQGIGFAIAKRLVEDGFKVAIVDY----NEETAQAAADKLSKDGGKAIAVKADVS 61

Query: 133 DAKAVNKFFSENA-----FDAVMHFAAVA 156
           D   V     +        + V++ A VA
Sbjct: 62  DRDQVFAAVRQVVDTFGDLNVVVNNAGVA 90

Length = 256

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 22/98 (22%), Positives = 35/98 (35%), Gaps = 10/98 (10%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG--RLQFIYA 129
            V++TG    IG   A  L K    V I     R      +   E+  E G  +++ I  
Sbjct: 3   VVVITGANSGIGKETARELAKRGAHVIIA---CRNEEKGEEAAAEIKKETGNAKVEVIQL 59

Query: 130 DLGDAKAVNKFFSE-----NAFDAVMHFAAVAYVGEST 162
           DL    +V +F  E        D +++ A +       
Sbjct: 60  DLSSLASVRQFAEEFLARFPRLDILINNAGIMAPPRRL 97

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1

 Score = 38.4 bits (90), Expect = 0.003
 Identities = 45/216 (20%), Positives = 82/216 (37%), Gaps = 45/216 (20%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIV------------DNL-SRGNIGAVKVLQELF 118
            VL+TG  G++G++    LLK      I             + L        + +  EL 
Sbjct: 1   TVLLTGATGFLGAYLLRELLKRKNVSKIYCLVRAKDEEAALERLIDNLKEYGLNLWDELE 60

Query: 119 PEPGRLQFIYADLGDAK---AVNKFFSE-NAFDAVMHFAA-VAYVGESTLDPLKYYH--- 170
               R++ +  DL       + + +       D ++H  A V +V          Y    
Sbjct: 61  LS--RIKVVVGDLSKPNLGLSDDDYQELAEEVDVIIHNGANVNWV--------YPYEELK 110

Query: 171 --NITSNTLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAPI-------NPY 220
             N+   T  +L+ +A  G +  L + ST + +   E   + +E     +       N Y
Sbjct: 111 PANVLG-TKELLK-LAATGKLKPLHFVSTLSVFSAEEYNALDDEESDDMLESQNGLPNGY 168

Query: 221 GKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPE 256
            ++K +AE ++ + + N  + V I+R  N I  D E
Sbjct: 169 IQSKWVAEKLLREAA-NRGLPVAIIRPGN-IFGDSE 202

This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 37.5 bits (88), Expect = 0.003
 Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 7/90 (7%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYAD 130
            VL+TGG G +G   A  L  +  R  ++ +      GA +++ EL    G  +     D
Sbjct: 2   TVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAEL-EALGAEVTVAACD 60

Query: 131 LGDAKAVNKFFSENA-----FDAVMHFAAV 155
           + D  A+    +         D V+H A V
Sbjct: 61  VADRDALAALLAALPAALGPLDGVVHNAGV 90

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 38.1 bits (89), Expect = 0.003
 Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 8/69 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTG  GY+G     RLL++ ++V     L R                 R+  +  DL 
Sbjct: 1   VLVTGATGYVGGRLVPRLLQEGHQVRA---LVRSPEKLADRPWS-----ERVTVVRGDLE 52

Query: 133 DAKAVNKFF 141
           D +++    
Sbjct: 53  DPESLRAAL 61

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 37.7 bits (88), Expect = 0.003
 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 3/59 (5%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
             ++TGGA  IG   A  LLK   +V I+D     N GA   LQ + P+  +  F+  D
Sbjct: 2   VAIITGGASGIGLATAKLLLKKGAKVAILD--RNENPGAAAELQAINPK-VKATFVQCD 57

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 37.7 bits (88), Expect = 0.004
 Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 11/84 (13%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            V VTG  G+IGS     L+   + V     L+R + GA K+      E    Q    DL
Sbjct: 2   KVFVTGATGFIGSAVVRELVAAGHEVV---GLARSDAGAAKL------EAAGAQVHRGDL 52

Query: 132 GDAKAVNKFFSENAFDAVMHFAAV 155
            D   + K  +E   DAV+H A  
Sbjct: 53  EDLDILRKAAAEA--DAVIHLAFT 74

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 37.6 bits (88), Expect = 0.004
 Identities = 28/104 (26%), Positives = 40/104 (38%), Gaps = 17/104 (16%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD 133
           LVTG +  IG   A RL +D   V +  N +     A +V+ E+    G+   + AD+ D
Sbjct: 7   LVTGASRGIGRAIAKRLARDGASVVV--NYASSKAAAEEVVAEIEAAGGKAIAVQADVSD 64

Query: 134 AKAVNKFFSE-------------NAFDAVMHFAAVAYVGESTLD 164
              V + F               NA   VM    +A   E   D
Sbjct: 65  PSQVARLFDAAEKAFGGVDILVNNA--GVMLKKPIAETSEEEFD 106

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	296
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	100.0
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.97
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.97
PLN02240	352	UDP-glucose 4-epimerase	99.97
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.97
PLN02572	442	UDP-sulfoquinovose synthase	99.97
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.97
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.97
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.97
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.97
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.97
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.97
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.97
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.97
PLN02653	340	GDP-mannose 4,6-dehydratase	99.97
PLN02427	386	UDP-apiose/xylose synthase	99.97
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.96
PLN02214	342	cinnamoyl-CoA reductase	99.96
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.96
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.96
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.96
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.96
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.96
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.96
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.96
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.96
PLN00198	338	anthocyanidin reductase; Provisional	99.96
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.96
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.96
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.96
PLN02206	442	UDP-glucuronate decarboxylase	99.96
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.96
PLN02260	668	probable rhamnose biosynthetic enzyme	99.96
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.96
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.96
PLN02650	351	dihydroflavonol-4-reductase	99.96
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.95
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.95
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.95
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.95
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.95
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.95
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.95
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.94
PRK05854	313	short chain dehydrogenase; Provisional	99.94
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.94
PLN02583	297	cinnamoyl-CoA reductase	99.94
PLN02686	367	cinnamoyl-CoA reductase	99.94
PRK08339	263	short chain dehydrogenase; Provisional	99.94
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.94
PRK05876	275	short chain dehydrogenase; Provisional	99.94
PRK06197	306	short chain dehydrogenase; Provisional	99.94
PRK07024	257	short chain dehydrogenase; Provisional	99.94
PRK06196	315	oxidoreductase; Provisional	99.94
PRK07478	254	short chain dehydrogenase; Provisional	99.94
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.94
PRK05993	277	short chain dehydrogenase; Provisional	99.93
PRK07063	260	short chain dehydrogenase; Provisional	99.93
KOG1208	314	consensus Dehydrogenases with different specificit	99.93
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.93
PRK08589	272	short chain dehydrogenase; Validated	99.93
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.93
PRK06128	300	oxidoreductase; Provisional	99.93
PRK07890	258	short chain dehydrogenase; Provisional	99.93
PRK06180	277	short chain dehydrogenase; Provisional	99.93
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.93
PRK07062	265	short chain dehydrogenase; Provisional	99.93
PRK06139	330	short chain dehydrogenase; Provisional	99.93
PRK05866	293	short chain dehydrogenase; Provisional	99.93
PRK07904	253	short chain dehydrogenase; Provisional	99.93
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.93
PRK06182	273	short chain dehydrogenase; Validated	99.93
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.93
PRK06523	260	short chain dehydrogenase; Provisional	99.93
PRK06482	276	short chain dehydrogenase; Provisional	99.93
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.93
PLN02780	320	ketoreductase/ oxidoreductase	99.93
PRK07985	294	oxidoreductase; Provisional	99.93
PRK07825	273	short chain dehydrogenase; Provisional	99.93
PRK05717	255	oxidoreductase; Validated	99.93
PRK09186	256	flagellin modification protein A; Provisional	99.93
PRK06101	240	short chain dehydrogenase; Provisional	99.93
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.93
PRK07109	334	short chain dehydrogenase; Provisional	99.93
PRK07454	241	short chain dehydrogenase; Provisional	99.93
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.93
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.93
PRK06179	270	short chain dehydrogenase; Provisional	99.92
PRK06398	258	aldose dehydrogenase; Validated	99.92
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.92
PRK06114	254	short chain dehydrogenase; Provisional	99.92
PRK06194	287	hypothetical protein; Provisional	99.92
KOG0725	270	consensus Reductases with broad range of substrate	99.92
PRK08643	256	acetoin reductase; Validated	99.92
PRK08628	258	short chain dehydrogenase; Provisional	99.92
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PRK05599	246	hypothetical protein; Provisional	99.92
PLN02253	280	xanthoxin dehydrogenase	99.92
PRK12747	252	short chain dehydrogenase; Provisional	99.92
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.92
PRK06138	252	short chain dehydrogenase; Provisional	99.92
PRK08251	248	short chain dehydrogenase; Provisional	99.92
PRK06914	280	short chain dehydrogenase; Provisional	99.92
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.92
PRK06172	253	short chain dehydrogenase; Provisional	99.92
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.92
PRK07102	243	short chain dehydrogenase; Provisional	99.92
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.92
PRK08265	261	short chain dehydrogenase; Provisional	99.92
PRK07035	252	short chain dehydrogenase; Provisional	99.92
PRK05650	270	short chain dehydrogenase; Provisional	99.92
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.92
PRK07067	257	sorbitol dehydrogenase; Provisional	99.92
PRK09242	257	tropinone reductase; Provisional	99.92
PRK06701	290	short chain dehydrogenase; Provisional	99.92
PRK12827	249	short chain dehydrogenase; Provisional	99.92
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.92
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.92
PRK08263	275	short chain dehydrogenase; Provisional	99.92
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.92
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.92
PRK12746	254	short chain dehydrogenase; Provisional	99.92
PRK05867	253	short chain dehydrogenase; Provisional	99.92
PRK07774	250	short chain dehydrogenase; Provisional	99.92
PRK07775	274	short chain dehydrogenase; Provisional	99.92
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.92
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.92
PRK10538	248	malonic semialdehyde reductase; Provisional	99.92
PRK08264	238	short chain dehydrogenase; Validated	99.92
PRK07814	263	short chain dehydrogenase; Provisional	99.92
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.92
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.92
PRK07677	252	short chain dehydrogenase; Provisional	99.92
PRK08267	260	short chain dehydrogenase; Provisional	99.92
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.92
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.91
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.91
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.91
PRK06500	249	short chain dehydrogenase; Provisional	99.91
PRK08303	305	short chain dehydrogenase; Provisional	99.91
PRK07791	286	short chain dehydrogenase; Provisional	99.91
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.91
PRK09135	249	pteridine reductase; Provisional	99.91
PRK12743	256	oxidoreductase; Provisional	99.91
PRK05872	296	short chain dehydrogenase; Provisional	99.91
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.91
PRK05875	276	short chain dehydrogenase; Provisional	99.91
PRK05693	274	short chain dehydrogenase; Provisional	99.91
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.91
PRK09291	257	short chain dehydrogenase; Provisional	99.91
PRK07831	262	short chain dehydrogenase; Provisional	99.91
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.91
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.91
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.91
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.91
PRK08278	273	short chain dehydrogenase; Provisional	99.91
PRK06181	263	short chain dehydrogenase; Provisional	99.91
PRK07069	251	short chain dehydrogenase; Validated	99.91
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.91
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.91
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PLN02996	491	fatty acyl-CoA reductase	99.91
PRK09134	258	short chain dehydrogenase; Provisional	99.91
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.91
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.91
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.91
PRK06949	258	short chain dehydrogenase; Provisional	99.91
PRK07856	252	short chain dehydrogenase; Provisional	99.91
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.91
PRK08862	227	short chain dehydrogenase; Provisional	99.91
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.91
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.91
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.91
PRK06483	236	dihydromonapterin reductase; Provisional	99.91
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.91
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.91
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.91
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK06125	259	short chain dehydrogenase; Provisional	99.91
PRK07576	264	short chain dehydrogenase; Provisional	99.91
PRK08703	239	short chain dehydrogenase; Provisional	99.91
PRK05855	582	short chain dehydrogenase; Validated	99.9
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.9
PRK12939	250	short chain dehydrogenase; Provisional	99.9
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.9
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PRK08226	263	short chain dehydrogenase; Provisional	99.9
PRK12744	257	short chain dehydrogenase; Provisional	99.9
PRK06123	248	short chain dehydrogenase; Provisional	99.9
PRK12937	245	short chain dehydrogenase; Provisional	99.9
PRK07060	245	short chain dehydrogenase; Provisional	99.9
PRK06484	520	short chain dehydrogenase; Validated	99.9
PRK06841	255	short chain dehydrogenase; Provisional	99.9
PRK07023	243	short chain dehydrogenase; Provisional	99.9
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.9
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.9
PRK12829	264	short chain dehydrogenase; Provisional	99.9
PRK06057	255	short chain dehydrogenase; Provisional	99.9
PRK07201	657	short chain dehydrogenase; Provisional	99.9
PRK06940	275	short chain dehydrogenase; Provisional	99.9
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PRK07832	272	short chain dehydrogenase; Provisional	99.9
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.9
PRK07806	248	short chain dehydrogenase; Provisional	99.9
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.9
PRK07577	234	short chain dehydrogenase; Provisional	99.9
PRK12742	237	oxidoreductase; Provisional	99.9
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.9
PRK05884	223	short chain dehydrogenase; Provisional	99.9
PRK12828	239	short chain dehydrogenase; Provisional	99.9
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.9
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PLN02778	298	3,5-epimerase/4-reductase	99.89
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.89
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.89
PRK07074	257	short chain dehydrogenase; Provisional	99.89
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.89
PRK07041	230	short chain dehydrogenase; Provisional	99.89
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.89
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.89
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.89
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.89
PRK09072	263	short chain dehydrogenase; Provisional	99.89
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK07326	237	short chain dehydrogenase; Provisional	99.89
PLN00015	308	protochlorophyllide reductase	99.89
PRK06198	260	short chain dehydrogenase; Provisional	99.89
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.89
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.88
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.88
PRK08177	225	short chain dehydrogenase; Provisional	99.88
PRK07201	657	short chain dehydrogenase; Provisional	99.88
PLN03209	576	translocon at the inner envelope of chloroplast su	99.88
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.88
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.88
PRK06484	520	short chain dehydrogenase; Validated	99.88
PRK06924	251	short chain dehydrogenase; Provisional	99.88
PRK08017	256	oxidoreductase; Provisional	99.88
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.88
PRK06953	222	short chain dehydrogenase; Provisional	99.88
CHL00194	317	ycf39 Ycf39; Provisional	99.88
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.87
PRK08324	681	short chain dehydrogenase; Validated	99.87
PRK07578	199	short chain dehydrogenase; Provisional	99.87
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.87
PRK08219	227	short chain dehydrogenase; Provisional	99.87
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.87
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.87
PLN00016	378	RNA-binding protein; Provisional	99.87
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.86
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.86
PRK12367	245	short chain dehydrogenase; Provisional	99.86
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.86
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.86
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.85
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.85
PLN02503	605	fatty acyl-CoA reductase 2	99.84
COG1028	251	FabG Dehydrogenases with different specificities (	99.84
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.84
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.84
PLN02260	668	probable rhamnose biosynthetic enzyme	99.84
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.84
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.83
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.83
PRK05865	854	hypothetical protein; Provisional	99.83
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.81
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.8
PRK12320	699	hypothetical protein; Provisional	99.8
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.78
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.77
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.75
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.74
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.74
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.65
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.64
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.64
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.63
PRK06720	169	hypothetical protein; Provisional	99.6
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.57
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.53
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.53
KOG2774	366	consensus NAD dependent epimerase [General functio	99.5
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.49
COG2910	211	Putative NADH-flavin reductase [General function p	99.45
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.37
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.34
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.34
PTZ00325	321	malate dehydrogenase; Provisional	99.32
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.24
PLN00106	323	malate dehydrogenase	99.2
PRK08309	177	short chain dehydrogenase; Provisional	99.18
KOG4288	283	consensus Predicted oxidoreductase [General functi	98.97
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.94
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.92
PRK09620	229	hypothetical protein; Provisional	98.82
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.8
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.8
PRK05086	312	malate dehydrogenase; Provisional	98.73
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.73
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.68
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.61
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.54
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.52
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.51
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.49
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.46
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	98.41
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	98.33
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.33
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	98.32
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.27
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.25
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	98.17
PRK14982	340	acyl-ACP reductase; Provisional	98.13
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.12
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	98.12
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	98.09
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	98.07
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.99
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.97
PRK05442	326	malate dehydrogenase; Provisional	97.92
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.9
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.9
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.87
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	97.85
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	97.83
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	97.82
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.82
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.78
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	97.77
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.76
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.74
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.72
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	97.68
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.61
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.61
PLN02602	350	lactate dehydrogenase	97.58
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.57
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	97.56
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.55
PRK06223	307	malate dehydrogenase; Reviewed	97.54
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.5
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.49
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	97.46
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.42
PTZ00117	319	malate dehydrogenase; Provisional	97.42
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	97.42
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.42
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.42
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.41
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.41
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	97.39
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.39
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.38
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.37
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.37
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.36
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.35
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	97.34
PRK08328	231	hypothetical protein; Provisional	97.34
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.34
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	97.33
COG3268	382	Uncharacterized conserved protein [Function unknow	97.32
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.31
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.3
PRK09496	453	trkA potassium transporter peripheral membrane com	97.29
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.25
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.24
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	97.23
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	97.2
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.19
PRK06849	389	hypothetical protein; Provisional	97.17
PRK09496	453	trkA potassium transporter peripheral membrane com	97.14
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.13
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	97.11
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.08
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.06
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	97.06
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	97.05
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.03
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	97.0
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.98
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.97
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.96
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	96.93
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.91
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.91
PRK08223	287	hypothetical protein; Validated	96.88
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.86
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.82
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.8
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.79
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.78
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.78
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	96.77
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	96.77
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.75
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.74
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.73
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.72
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.69
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.65
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.63
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.62
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.62
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	96.61
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	96.6
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.56
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.55
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.55
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	96.53
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	96.5
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.47
PRK00048	257	dihydrodipicolinate reductase; Provisional	96.47
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.46
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.46
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.43
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	96.4
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.38
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.3
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.28
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	96.25
PRK07411	390	hypothetical protein; Validated	96.25
PRK08655	437	prephenate dehydrogenase; Provisional	96.25
PRK04148	134	hypothetical protein; Provisional	96.24
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.23
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.2
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.2
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	96.17
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.16
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.14
cd01486	307	Apg7 Apg7 is an E1-like protein, that activates tw	96.13
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.12
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.1
PRK12767	326	carbamoyl phosphate synthase-like protein; Provisi	96.05
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	96.03
PRK10669	558	putative cation:proton antiport protein; Provision	95.99
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	95.99
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	95.99
PRK07877	722	hypothetical protein; Provisional	95.98
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.97
COG0027	394	PurT Formate-dependent phosphoribosylglycinamide f	95.96
PLN02383	344	aspartate semialdehyde dehydrogenase	95.94
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	95.91
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	95.9
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.9
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	95.89
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	95.88
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.87
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	95.84
cd01490	435	Ube1_repeat2 Ubiquitin activating enzyme (E1), rep	95.81
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	95.81
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	95.77
PRK14852	989	hypothetical protein; Provisional	95.76
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	95.75
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	95.74
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.7
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	95.7
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	95.68
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	95.66
PLN00203	519	glutamyl-tRNA reductase	95.66
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.59
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	95.57
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	95.56
PRK03659	601	glutathione-regulated potassium-efflux system prot	95.55
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	95.54
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	95.53
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	95.49
PLN02586	360	probable cinnamyl alcohol dehydrogenase	95.45
PRK14851	679	hypothetical protein; Provisional	95.45
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.43
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	95.43
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.4
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	95.38
PTZ00354	334	alcohol dehydrogenase; Provisional	95.37
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	95.37
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	95.36
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	95.36
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	95.36
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.34
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	95.32
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	95.32
PF08732	410	HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti	95.3
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.3
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.29
PLN02740	381	Alcohol dehydrogenase-like	95.29
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	95.27
PRK13303	265	L-aspartate dehydrogenase; Provisional	95.24
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.22
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	95.21
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	95.19

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2.7e-39  Score=275.44  Aligned_cols=209  Identities=46%  Similarity=0.708  Sum_probs=195.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+||||||+|+||+|.+.+|++.|++|+++|+......+.....        ...++++|+.|.+.+++++++.++|.||
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~--------~~~f~~gDi~D~~~L~~vf~~~~idaVi   72 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL--------QFKFYEGDLLDRALLTAVFEENKIDAVV   72 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc--------cCceEEeccccHHHHHHHHHhcCCCEEE
Confidence            58999999999999999999999999999998776655443321        1679999999999999999999999999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  230 (296)
                      |.||....+.+.+.|.++++.|+.||..|+++|++.++++|||.||+++||.+...|++|+.|..|.+|||.||+..|++
T Consensus        73 HFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~i  152 (329)
T COG1087          73 HFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEI  152 (329)
T ss_pred             ECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCCcceEE
Q 022471          231 ILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVC  291 (296)
Q Consensus       231 ~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  291 (296)
                      ++.+++.++++++++|.+++-|.++++.+|+++.+..    .+||.+++.+++.++.+.||
T Consensus       153 L~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~t----hLip~~~q~A~G~r~~l~if  209 (329)
T COG1087         153 LRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGAT----LLIPVAAEAALGKRDKLFIF  209 (329)
T ss_pred             HHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcc----hHHHHHHHHHhcCCceeEEe
Confidence            9999999999999999999999999999999999885    99999999999999988876

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=1.4e-32  Score=250.01  Aligned_cols=209  Identities=25%  Similarity=0.307  Sum_probs=168.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCC--CCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP--EPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      +|+||||||||+||++|+++|+++|++|++++|.................  ...++.++.+|++|.+++.+++  .++|
T Consensus        15 ~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~--~~~d   92 (348)
T PRK15181         15 PKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKAC--KNVD   92 (348)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh--hCCC
Confidence            38999999999999999999999999999999865432222211111100  1135789999999999999988  4699


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHH
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~  227 (296)
                      +|||+|+.........++...+++|+.||.++++++++.+++++||+||+++||.....+..|+.+..|.++|+.||.++
T Consensus        93 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~  172 (348)
T PRK15181         93 YVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVN  172 (348)
T ss_pred             EEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHHH
Confidence            99999998665555667788999999999999999999999999999999999876666677777778889999999999


Q ss_pred             HHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCCcceE
Q 022471          228 EDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKV  290 (296)
Q Consensus       228 e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  290 (296)
                      |.+++.++.+++++++++||++||||++.....         ...+++.++.++..+++ +.+
T Consensus       173 e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~---------~~~~i~~~~~~~~~~~~-i~~  225 (348)
T PRK15181        173 ELYADVFARSYEFNAIGLRYFNVFGRRQNPNGA---------YSAVIPRWILSLLKDEP-IYI  225 (348)
T ss_pred             HHHHHHHHHHhCCCEEEEEecceeCcCCCCCCc---------cccCHHHHHHHHHcCCC-cEE
Confidence            999999888889999999999999998642100         01688998888887776 443

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=4e-32  Score=230.64  Aligned_cols=204  Identities=27%  Similarity=0.344  Sum_probs=176.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      |++|||||+||||++.++.++++..  +|+.+|...-..  ..+.+..+.. .++..|+++|++|.+.+.+++++.++|+
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAg--n~~~l~~~~~-~~~~~fv~~DI~D~~~v~~~~~~~~~D~   77 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAG--NLENLADVED-SPRYRFVQGDICDRELVDRLFKEYQPDA   77 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccC--CHHHHHhhhc-CCCceEEeccccCHHHHHHHHHhcCCCe
Confidence            5799999999999999999999854  578887643221  1222333333 3689999999999999999998888999


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcccccccCCCCC--CCCCCCCCCCCChHHHHHH
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSSTCATYGEPEKM--PITEETPQAPINPYGKAKK  225 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS~~~~g~~~~~--~~~e~~~~~~~~~Y~~sK~  225 (296)
                      |+|.|+-++...+...+....++|+.||.++|+++++...+ |++++|+-.|||.....  .++|++|..|.+||++||+
T Consensus        78 VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKA  157 (340)
T COG1088          78 VVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKA  157 (340)
T ss_pred             EEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhh
Confidence            99999999999999999999999999999999999998764 99999999999976543  6999999999999999999


Q ss_pred             HHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCCcceEE
Q 022471          226 MAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVC  291 (296)
Q Consensus       226 ~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  291 (296)
                      +++.+++++.+.+|+++++.|+++-|||..-+        .     .+||.++-.++.|+| ++++
T Consensus       158 asD~lVray~~TYglp~~ItrcSNNYGPyqfp--------E-----KlIP~~I~nal~g~~-lpvY  209 (340)
T COG1088         158 ASDLLVRAYVRTYGLPATITRCSNNYGPYQFP--------E-----KLIPLMIINALLGKP-LPVY  209 (340)
T ss_pred             hHHHHHHHHHHHcCCceEEecCCCCcCCCcCc--------h-----hhhHHHHHHHHcCCC-Ccee
Confidence            99999999999999999999999999998532        1     899999999999888 6554

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=2.9e-32  Score=234.70  Aligned_cols=218  Identities=51%  Similarity=0.798  Sum_probs=200.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      ++||||||+|+||+|.+.+|+++|+.|+++|...+......+.++.+..++..+.++++|++|.+.+++++++.++|.|+
T Consensus         3 ~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~   82 (343)
T KOG1371|consen    3 KHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAVM   82 (343)
T ss_pred             cEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceEE
Confidence            78999999999999999999999999999998887777777777777776789999999999999999999998999999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC-CCChHHHHHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAED  229 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~-~~~~Y~~sK~~~e~  229 (296)
                      |.|+....+++.+.+..++.+|+.||.++++.|++.+.+.+||.||+.+||.+...|++|+.+.. |.++|+.+|.+.|.
T Consensus        83 Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE~  162 (343)
T KOG1371|consen   83 HFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIEE  162 (343)
T ss_pred             eehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999998 99999999999999


Q ss_pred             HHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCCcceEE
Q 022471          230 IILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVC  291 (296)
Q Consensus       230 ~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  291 (296)
                      .+..+...++..++.||.++++|.++.++++.++..   .+.++.|.+.+.++...|.+.++
T Consensus       163 i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~---~~nnl~p~v~~vaigr~~~l~v~  221 (343)
T KOG1371|consen  163 IIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLG---IPNNLLPYVFQVAIGRRPNLQVV  221 (343)
T ss_pred             HHHhhhccccceEEEEEeccccCccccCccCCCCcc---Ccccccccccchhhcccccceee
Confidence            999999888899999999999999988888887743   34588888888888888777664

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.97  E-value=1.4e-30  Score=236.98  Aligned_cols=201  Identities=24%  Similarity=0.279  Sum_probs=165.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +|+||||||+||||+++++.|+++|++|++++|+........+.+.    ...++.++.+|++|.+++.+++++.++|+|
T Consensus         4 ~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~v   79 (349)
T TIGR02622         4 GKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN----LAKKIEDHFGDIRDAAKLRKAIAEFKPEIV   79 (349)
T ss_pred             CCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh----hcCCceEEEccCCCHHHHHHHHhhcCCCEE
Confidence            3899999999999999999999999999999986544332222221    123577889999999999999977679999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcccccccCCCC-CCCCCCCCCCCCChHHHHHHHH
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEPEK-MPITEETPQAPINPYGKAKKMA  227 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~~riV~~SS~~~~g~~~~-~~~~e~~~~~~~~~Y~~sK~~~  227 (296)
                      ||+||........+++...+++|+.++.++++++++.+ .+++|++||..+|+.... .+++|+.+..|.++|+.||.++
T Consensus        80 ih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~  159 (349)
T TIGR02622        80 FHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACA  159 (349)
T ss_pred             EECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHH
Confidence            99999765555666788899999999999999998876 679999999999986532 3577777888899999999999


Q ss_pred             HHHHHHhhhcC-------CCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          228 EDIILDFSKNS-------DMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       228 e~~~~~~~~~~-------gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      |.+++.++.++       +++++++||++||||++..     .       ..+++.+++.+.++++
T Consensus       160 e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~-----~-------~~~~~~~~~~~~~g~~  213 (349)
T TIGR02622       160 ELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWA-----E-------DRLIPDVIRAFSSNKI  213 (349)
T ss_pred             HHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcch-----h-------hhhhHHHHHHHhcCCC
Confidence            99999987653       8999999999999997421     0       2688999999988776

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.97  E-value=1.6e-30  Score=238.83  Aligned_cols=208  Identities=27%  Similarity=0.328  Sum_probs=183.3

Q ss_pred             HhcCCCCCCCCCCCCCCCCCccEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEE
Q 022471           50 LLKQSPTFSSPSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIY  128 (296)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (296)
                      ++.+.+.............+ |+||||||+|-||+++++++++.+. ++++++|++.+......++.+..+. .++.++-
T Consensus       231 LLgR~pV~~d~~~i~~~~~g-K~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~-~~~~~~i  308 (588)
T COG1086         231 LLGRPPVALDTELIGAMLTG-KTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPE-LKLRFYI  308 (588)
T ss_pred             HhCCCCCCCCHHHHHhHcCC-CEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCC-cceEEEe
Confidence            77777666555444444445 9999999999999999999999876 7888898887777777777776653 6888999


Q ss_pred             ccCCCHHHHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCC
Q 022471          129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPI  208 (296)
Q Consensus       129 ~Dl~d~~~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~  208 (296)
                      +|++|.+.+.++++..++|+|+|+|+..+.+..+.++.+.+.+|+.||+++++++.+++++++|.+||            
T Consensus       309 gdVrD~~~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iST------------  376 (588)
T COG1086         309 GDVRDRDRVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLIST------------  376 (588)
T ss_pred             cccccHHHHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEec------------
Confidence            99999999999998888999999999999999999999999999999999999999999999999999            


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHhhhc-C--CCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCC
Q 022471          209 TEETPQAPINPYGKAKKMAEDIILDFSKN-S--DMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII  285 (296)
Q Consensus       209 ~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~--gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  285 (296)
                        |....|.+.||+||+.+|.++.+++.+ .  +.+++++|+|||.|..                |+++|.|.+++.+|.
T Consensus       377 --DKAV~PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSr----------------GSViPlFk~QI~~Gg  438 (588)
T COG1086         377 --DKAVNPTNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSR----------------GSVIPLFKKQIAEGG  438 (588)
T ss_pred             --CcccCCchHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCC----------------CCCHHHHHHHHHcCC
Confidence              567788999999999999999999875 3  4899999999999987                599999999999998


Q ss_pred             CcceE
Q 022471          286 AGLKV  290 (296)
Q Consensus       286 ~~~~~  290 (296)
                      | +++
T Consensus       439 p-lTv  442 (588)
T COG1086         439 P-LTV  442 (588)
T ss_pred             C-ccc
Confidence            8 665

>PLN02240 UDP-glucose 4-epimerase

Probab=99.97  E-value=1.5e-29  Score=230.15  Aligned_cols=215  Identities=41%  Similarity=0.708  Sum_probs=170.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhC-CCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      |+|+||||+|+||++++++|+++|++|++++|...........+.... ..+.++.++.+|++|.+++.++++..++|+|
T Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d~v   85 (352)
T PLN02240          6 RTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFDAV   85 (352)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCCCEE
Confidence            899999999999999999999999999999875433322222222221 1124678899999999999999876689999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~  229 (296)
                      ||+||........+.+...+++|+.++.++++++++.+.+++|++||.++|+.....+++|+.+..+.++|+.||.++|.
T Consensus        86 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  165 (352)
T PLN02240         86 IHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLFIEE  165 (352)
T ss_pred             EEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence            99999765444556778899999999999999999988889999999999987766789999999899999999999999


Q ss_pred             HHHHhhhc-CCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCCcc
Q 022471          230 IILDFSKN-SDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGL  288 (296)
Q Consensus       230 ~~~~~~~~-~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  288 (296)
                      +++.++.+ .+++++++|++++||+++...+|+.+....   ..+++.+.+...+..+.+
T Consensus       166 ~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~  222 (352)
T PLN02240        166 ICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIP---NNLMPYVQQVAVGRRPEL  222 (352)
T ss_pred             HHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCc---chHHHHHHHHHhCCCCce
Confidence            99998754 689999999999999987776665432111   246666655554444433

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.97  E-value=8.2e-30  Score=232.33  Aligned_cols=201  Identities=24%  Similarity=0.319  Sum_probs=158.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEE-EecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTI-VDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      ||+|||||||||||++++++|+++|++|++ +++.... ... ..+.... ...++.++.+|++|.++++++++..++|+
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~-~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~   77 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNL-MSLAPVA-QSERFAFEKVDICDRAELARVFTEHQPDC   77 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cch-hhhhhcc-cCCceEEEECCCcChHHHHHHHhhcCCCE
Confidence            579999999999999999999999987554 4443221 111 1111111 12467888999999999999997667999


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEcccccccCCC--CCCCCCCCCCCCC
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH---------GVDTLIYSSTCATYGEPE--KMPITEETPQAPI  217 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~---------~~~riV~~SS~~~~g~~~--~~~~~e~~~~~~~  217 (296)
                      ||||||........+.+...+++|+.++.++++++++.         +.+++|++||.++|+...  ..+++|+.+..|.
T Consensus        78 Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~  157 (355)
T PRK10217         78 VMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPS  157 (355)
T ss_pred             EEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCC
Confidence            99999976544445567889999999999999999862         457999999999998542  3468888888889


Q ss_pred             ChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          218 NPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      +.|+.||.++|.+++.++++++++++++||++||||++..             ..+++.++..+..+++
T Consensus       158 s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~-------------~~~~~~~~~~~~~~~~  213 (355)
T PRK10217        158 SPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFP-------------EKLIPLMILNALAGKP  213 (355)
T ss_pred             ChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCc-------------ccHHHHHHHHHhcCCC
Confidence            9999999999999999988899999999999999998521             1577777777776665

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.97  E-value=8.4e-30  Score=238.02  Aligned_cols=218  Identities=24%  Similarity=0.238  Sum_probs=157.8

Q ss_pred             CCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcch-------h------hhhhhhhC-CCCCceEEEEccCCC
Q 022471           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIG-------A------VKVLQELF-PEPGRLQFIYADLGD  133 (296)
Q Consensus        68 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~-------~------~~~~~~~~-~~~~~~~~~~~Dl~d  133 (296)
                      ..+|+||||||+||||++|+++|+++|++|+++++..+....       .      .+.++... ....+++++.+|++|
T Consensus        45 ~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d  124 (442)
T PLN02572         45 SKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICD  124 (442)
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCC
Confidence            345899999999999999999999999999999864332110       0      01111100 012368899999999


Q ss_pred             HHHHHHHhhcCCCcEEEEcccccCcCCCCcC---hHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcccccccCCCCCCCC
Q 022471          134 AKAVNKFFSENAFDAVMHFAAVAYVGESTLD---PLKYYHNITSNTLVVLESMARHGVD-TLIYSSTCATYGEPEKMPIT  209 (296)
Q Consensus       134 ~~~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~---~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS~~~~g~~~~~~~~  209 (296)
                      .+.+++++++.++|+|||+|+.........+   ....+++|+.|+.++++++++.+++ +||++||.++||... .+++
T Consensus       125 ~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~-~~~~  203 (442)
T PLN02572        125 FEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPN-IDIE  203 (442)
T ss_pred             HHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCC-CCCc
Confidence            9999999976679999999986543333322   3456789999999999999998875 899999999998542 1222


Q ss_pred             C-----------C---CCCCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCC-C-Cc--cccccc
Q 022471          210 E-----------E---TPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEA-P-RP--ELREHG  271 (296)
Q Consensus       210 e-----------~---~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~-~-~~--~~~~~~  271 (296)
                      |           +   .+..|.++|+.||.++|.+++.+++++|++++++||++||||++....-.. . ..  ..+..+
T Consensus       204 E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~  283 (442)
T PLN02572        204 EGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFG  283 (442)
T ss_pred             ccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchh
Confidence            1           2   245677899999999999999999889999999999999999864310000 0 00  000112


Q ss_pred             ccHHHHHHHHhCCCC
Q 022471          272 RISGACFDAARGIIA  286 (296)
Q Consensus       272 ~~i~~~~~~~~~~~~  286 (296)
                      .+++.++..+..+++
T Consensus       284 ~~i~~~~~~~~~g~~  298 (442)
T PLN02572        284 TALNRFCVQAAVGHP  298 (442)
T ss_pred             hHHHHHHHHHhcCCC
Confidence            577777888777776

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.97  E-value=1.1e-29  Score=230.83  Aligned_cols=201  Identities=19%  Similarity=0.319  Sum_probs=158.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCC-CHHHHHHHhhcCCCc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG-DAKAVNKFFSENAFD  147 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~v~~~~~~~~~D  147 (296)
                      ||+||||||+|+||++|+++|+++ |++|++++|+....       ..... ...++++.+|++ +.+.+.+++  .++|
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~-------~~~~~-~~~~~~~~~Dl~~~~~~~~~~~--~~~d   70 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRL-------GDLVN-HPRMHFFEGDITINKEWIEYHV--KKCD   70 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHH-------HHhcc-CCCeEEEeCCCCCCHHHHHHHH--cCCC
Confidence            578999999999999999999986 79999998743211       11111 146889999998 777888877  4799


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCC-------CCCChH
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ-------APINPY  220 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~-------~~~~~Y  220 (296)
                      +|||+|+.........++...+++|+.+++++++++++.+ +++||+||..+||.....+++|+.+.       .|.++|
T Consensus        71 ~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y  149 (347)
T PRK11908         71 VILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIY  149 (347)
T ss_pred             EEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCcCCCccchH
Confidence            9999999766555566788889999999999999999887 79999999999986555556665431       356789


Q ss_pred             HHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          221 GKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       221 ~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      +.||.++|.+++.++.+++++++++||+++|||+.........     +...+++.++..+..+++
T Consensus       150 ~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~  210 (347)
T PRK11908        150 ACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKE-----GSSRVVTQFLGHIVRGEP  210 (347)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCcccc-----CCcchHHHHHHHHhCCCc
Confidence            9999999999999988899999999999999998543211110     112688888888888877

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.97  E-value=4.4e-29  Score=225.94  Aligned_cols=211  Identities=36%  Similarity=0.647  Sum_probs=166.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+|+||||+|+||++++++|+++|++|++++|..+........+....  +.++.++.+|++|.+.+.++++..++|+||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vv   78 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALLTEILHDHAIDTVI   78 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhc--CCCceEEEccCCCHHHHHHHHhcCCCCEEE
Confidence            579999999999999999999999999998865443332222222221  235678899999999999998766799999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCC-CCCChHHHHHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ-APINPYGKAKKMAED  229 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~-~~~~~Y~~sK~~~e~  229 (296)
                      |+||........+.+.+.+++|+.++.+++++|++.+.++||++||.++|+.....+++|+.+. .|.++|+.+|.++|+
T Consensus        79 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~  158 (338)
T PRK10675         79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQ  158 (338)
T ss_pred             ECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHH
Confidence            9999765444445667889999999999999999999899999999999987666678888776 678999999999999


Q ss_pred             HHHHhhhc-CCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          230 IILDFSKN-SDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       230 ~~~~~~~~-~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      +++.++++ .+++++++|++++|||++...+|.......   ..+++.+.+...++.+
T Consensus       159 ~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~---~~~~~~~~~~~~~~~~  213 (338)
T PRK10675        159 ILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIP---NNLMPYIAQVAVGRRD  213 (338)
T ss_pred             HHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCCh---hHHHHHHHHHHhcCCC
Confidence            99999765 589999999999999987777665432111   1466666666555444

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.97  E-value=1.7e-29  Score=225.03  Aligned_cols=175  Identities=17%  Similarity=0.188  Sum_probs=148.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+||||||+|+||++++++|+++| +|++++|..                    ..+.+|++|.+.+.++++..++|+||
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~--------------------~~~~~Dl~d~~~~~~~~~~~~~D~Vi   59 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHS--------------------TDYCGDFSNPEGVAETVRKIRPDVIV   59 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEecccc--------------------ccccCCCCCHHHHHHHHHhcCCCEEE
Confidence            579999999999999999999999 788887632                    12358999999999999766799999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  230 (296)
                      |+|+......++.++...+.+|+.++.++++++++.+. ++|++||..+|+.....|++|+++..|.++|+.||.++|.+
T Consensus        60 h~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~  138 (299)
T PRK09987         60 NAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKA  138 (299)
T ss_pred             ECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHH
Confidence            99998776667777888899999999999999999885 89999999999877667899999999999999999999999


Q ss_pred             HHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          231 ILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       231 ~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      ++.+.    .+.+++||++||||+..               .+++.+++.+.++++
T Consensus       139 ~~~~~----~~~~ilR~~~vyGp~~~---------------~~~~~~~~~~~~~~~  175 (299)
T PRK09987        139 LQEHC----AKHLIFRTSWVYAGKGN---------------NFAKTMLRLAKEREE  175 (299)
T ss_pred             HHHhC----CCEEEEecceecCCCCC---------------CHHHHHHHHHhcCCC
Confidence            98754    35799999999999632               455666666655544

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.97  E-value=2.2e-29  Score=216.06  Aligned_cols=196  Identities=30%  Similarity=0.470  Sum_probs=168.2

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEEEc
Q 022471           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHF  152 (296)
Q Consensus        73 vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi~~  152 (296)
                      ||||||+|+||++++++|+++|+.|+.+.|...........        .++.++.+|+.|.+.++++++..++|+|||+
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~--------~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~   72 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK--------LNVEFVIGDLTDKEQLEKLLEKANIDVVIHL   72 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH--------TTEEEEESETTSHHHHHHHHHHHTESEEEEE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc--------ceEEEEEeeccccccccccccccCceEEEEe
Confidence            79999999999999999999999999888765443222111        2688999999999999999987788999999


Q ss_pred             ccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 022471          153 AAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIIL  232 (296)
Q Consensus       153 Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~  232 (296)
                      |+..............++.|+.++.++++++++.+.+++|++||..+|+.....+++|+.+..|.++|+.+|...|.+++
T Consensus        73 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~  152 (236)
T PF01370_consen   73 AAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLR  152 (236)
T ss_dssp             BSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHH
T ss_pred             eccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99764333346778899999999999999999999999999999999998877789999988999999999999999999


Q ss_pred             HhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          233 DFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       233 ~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      .+.++++++++++||++||||+ ...  ..       ...+++.+++.+.+++|
T Consensus       153 ~~~~~~~~~~~~~R~~~vyG~~-~~~--~~-------~~~~~~~~~~~~~~~~~  196 (236)
T PF01370_consen  153 DYAKKYGLRVTILRPPNVYGPG-NPN--NN-------SSSFLPSLIRQALKGKP  196 (236)
T ss_dssp             HHHHHHTSEEEEEEESEEESTT-SSS--SS-------TSSHHHHHHHHHHTTSS
T ss_pred             cccccccccccccccccccccc-ccc--cc-------cccccchhhHHhhcCCc
Confidence            9998889999999999999998 110  01       13899999999999987

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.97  E-value=4.7e-29  Score=226.43  Aligned_cols=206  Identities=22%  Similarity=0.204  Sum_probs=161.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcc-hhhhhhh-hhCC-CCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNI-GAVKVLQ-ELFP-EPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~-~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      |+||||||+||||++++++|+++|++|++++|+..... ...+.+. .... .+.++.++.+|++|.+++.++++..++|
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   80 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT   80 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence            58999999999999999999999999999998654211 1111111 0000 1245889999999999999999765789


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC---EEEEEcccccccCCCCCCCCCCCCCCCCChHHHHH
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD---TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAK  224 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~---riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK  224 (296)
                      +|||+|+........+.+...+++|+.+|.++++++++.+.+   ++|++||.++||.....+++|+.+..|.++|+.||
T Consensus        81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK  160 (343)
T TIGR01472        81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAK  160 (343)
T ss_pred             EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHH
Confidence            999999986654455566778889999999999999987753   89999999999976666788988888999999999


Q ss_pred             HHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          225 KMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       225 ~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      .++|.+++.++++++++++..|+.++|||+....    ..      ...+..+++.+..+++
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~----~~------~~~~~~~~~~~~~~~~  212 (343)
T TIGR01472       161 LYAHWITVNYREAYGLFAVNGILFNHESPRRGEN----FV------TRKITRAAAKIKLGLQ  212 (343)
T ss_pred             HHHHHHHHHHHHHhCCceEEEeecccCCCCCCcc----cc------chHHHHHHHHHHcCCC
Confidence            9999999999888899999999999999974211    00      1455566666655553

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.97  E-value=3.8e-30  Score=223.02  Aligned_cols=186  Identities=27%  Similarity=0.376  Sum_probs=148.1

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceE----EEEccCCCHHHHHHHhhcCCCc
Q 022471           73 VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQ----FIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        73 vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~----~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      ||||||+|.||++|+++|++.+. +++++++++.+.......+....+. .++.    .+.+|++|.+.+.+++++.++|
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~-~~v~~~~~~vigDvrd~~~l~~~~~~~~pd   79 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPD-PKVRFEIVPVIGDVRDKERLNRIFEEYKPD   79 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC---TTCEEEEE--CTSCCHHHHHHHHTT--T-S
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccc-cCcccccCceeecccCHHHHHHHHhhcCCC
Confidence            79999999999999999999985 7999998877766666666544332 3343    4589999999999999878999


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHH
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~  227 (296)
                      +|||.|+.-+.+..+.++.+.+++|+.||+++++++.+++++++|++||              |....|.+.||+||+.+
T Consensus        80 iVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~IST--------------DKAv~PtnvmGatKrla  145 (293)
T PF02719_consen   80 IVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFIST--------------DKAVNPTNVMGATKRLA  145 (293)
T ss_dssp             EEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEE--------------CGCSS--SHHHHHHHHH
T ss_pred             EEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccc--------------cccCCCCcHHHHHHHHH
Confidence            9999999999989999999999999999999999999999999999999              45677899999999999


Q ss_pred             HHHHHHhhhcC---CCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCCcceE
Q 022471          228 EDIILDFSKNS---DMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKV  290 (296)
Q Consensus       228 e~~~~~~~~~~---gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  290 (296)
                      |.++.+++...   +.+++++|+|||.|..                |+++|.|.+++.+|.| +++
T Consensus       146 E~l~~~~~~~~~~~~t~f~~VRFGNVlgS~----------------GSVip~F~~Qi~~g~P-lTv  194 (293)
T PF02719_consen  146 EKLVQAANQYSGNSDTKFSSVRFGNVLGSR----------------GSVIPLFKKQIKNGGP-LTV  194 (293)
T ss_dssp             HHHHHHHCCTSSSS--EEEEEEE-EETTGT----------------TSCHHHHHHHHHTTSS-EEE
T ss_pred             HHHHHHHhhhCCCCCcEEEEEEecceecCC----------------CcHHHHHHHHHHcCCc-cee
Confidence            99999998764   6899999999999986                5999999999999999 665

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.97  E-value=8.4e-29  Score=223.03  Aligned_cols=184  Identities=23%  Similarity=0.259  Sum_probs=146.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +|+||||||+||||++++++|+++|++|++++|+........... .......++.++.+|++|.+++++++  .++|+|
T Consensus         5 ~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~D~~d~~~~~~~~--~~~d~v   81 (325)
T PLN02989          5 GKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLL-ALDGAKERLKLFKADLLDEGSFELAI--DGCETV   81 (325)
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHH-hccCCCCceEEEeCCCCCchHHHHHH--cCCCEE
Confidence            389999999999999999999999999998887654433221111 11111246889999999999999998  469999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcccccccCC-----CCCCCCCCCCCCC------C
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATYGEP-----EKMPITEETPQAP------I  217 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-~~~riV~~SS~~~~g~~-----~~~~~~e~~~~~~------~  217 (296)
                      |||||........+.+.+.+++|+.++.++++++.+. +.++||++||.++|+..     ...+++|+.+..|      .
T Consensus        82 ih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~  161 (325)
T PLN02989         82 FHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERK  161 (325)
T ss_pred             EEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccc
Confidence            9999975443344556778999999999999999885 46799999998877543     2335677766554      3


Q ss_pred             ChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          218 NPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                      ++|+.||.++|.+++.++++++++++++||++||||+..
T Consensus       162 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~  200 (325)
T PLN02989        162 QWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQ  200 (325)
T ss_pred             cchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCC
Confidence            689999999999999998888999999999999999854

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.97  E-value=3.3e-29  Score=220.65  Aligned_cols=174  Identities=30%  Similarity=0.506  Sum_probs=138.2

Q ss_pred             EEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEEE
Q 022471           74 LVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMH  151 (296)
Q Consensus        74 lVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi~  151 (296)
                      |||||+||||++|+++|+++|  ++|.++++......  ......    .....++.+|++|.+++.+++  .++|+|||
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~--~~~~~~----~~~~~~~~~Di~d~~~l~~a~--~g~d~V~H   72 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF--LKDLQK----SGVKEYIQGDITDPESLEEAL--EGVDVVFH   72 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc--chhhhc----ccceeEEEeccccHHHHHHHh--cCCceEEE
Confidence            699999999999999999999  79999987654322  111111    123348999999999999999  68999999


Q ss_pred             cccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCC-CCCC---CCCCCCC--CCCChHHHHHH
Q 022471          152 FAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEP-EKMP---ITEETPQ--APINPYGKAKK  225 (296)
Q Consensus       152 ~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~-~~~~---~~e~~~~--~~~~~Y~~sK~  225 (296)
                      +|+...... ....+..+++|+.||++++++|++.+++|+||+||.++++.. ...+   .+|+.+.  .+...|+.||+
T Consensus        73 ~Aa~~~~~~-~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~  151 (280)
T PF01073_consen   73 TAAPVPPWG-DYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKA  151 (280)
T ss_pred             eCccccccC-cccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHH
Confidence            999765432 456677999999999999999999999999999999988752 1222   2444433  35679999999


Q ss_pred             HHHHHHHHhhh---c--CCCcEEEEecCeeecCCCC
Q 022471          226 MAEDIILDFSK---N--SDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       226 ~~e~~~~~~~~---~--~gi~~~~lrpg~v~Gp~~~  256 (296)
                      .+|+++.+...   +  ..+++++|||+.||||++.
T Consensus       152 ~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~  187 (280)
T PF01073_consen  152 LAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQ  187 (280)
T ss_pred             HHHHHHHhhcccccccccceeEEEEeccEEeCcccc
Confidence            99999998765   2  2489999999999999864

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.97  E-value=1e-28  Score=223.85  Aligned_cols=206  Identities=22%  Similarity=0.244  Sum_probs=162.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc-chhhhhhh-hhCCCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN-IGAVKVLQ-ELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      +|+||||||+||||++++++|+++|++|++++|..... ....+.+. .....+.++.++.+|++|.+++.++++..++|
T Consensus         6 ~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   85 (340)
T PLN02653          6 RKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKPD   85 (340)
T ss_pred             CCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCCC
Confidence            38999999999999999999999999999998865321 11111111 11111246889999999999999999766799


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-----EEEEEcccccccCCCCCCCCCCCCCCCCChHHH
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-----TLIYSSTCATYGEPEKMPITEETPQAPINPYGK  222 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-----riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~  222 (296)
                      +||||||........+++...+++|+.++.++++++++.+.+     ++|++||.++||.... +++|+.+..|.++|+.
T Consensus        86 ~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~~~~~p~~~Y~~  164 (340)
T PLN02653         86 EVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSETTPFHPRSPYAV  164 (340)
T ss_pred             EEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCCCCCCCCChhHH
Confidence            999999986555455667778899999999999999988764     8999999999987654 7888888889999999


Q ss_pred             HHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          223 AKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       223 sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      ||.++|.+++.++.++++.++..++.++|||+....    ..      ..++..+++.+..+++
T Consensus       165 sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~----~~------~~~~~~~~~~~~~~~~  218 (340)
T PLN02653        165 AKVAAHWYTVNYREAYGLFACNGILFNHESPRRGEN----FV------TRKITRAVGRIKVGLQ  218 (340)
T ss_pred             HHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcc----cc------hhHHHHHHHHHHcCCC
Confidence            999999999999988999999999999999974211    00      1455566666666654

>PLN02427 UDP-apiose/xylose synthase

Probab=99.97  E-value=1.2e-28  Score=227.15  Aligned_cols=209  Identities=21%  Similarity=0.281  Sum_probs=154.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      |+|||||||||||++++++|+++ |++|++++|+........... . .....+++++.+|++|.+.+.+++  .++|+|
T Consensus        15 ~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~-~-~~~~~~~~~~~~Dl~d~~~l~~~~--~~~d~V   90 (386)
T PLN02427         15 LTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPD-T-VPWSGRIQFHRINIKHDSRLEGLI--KMADLT   90 (386)
T ss_pred             cEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccc-c-ccCCCCeEEEEcCCCChHHHHHHh--hcCCEE
Confidence            78999999999999999999998 599999987543221111000 0 001246899999999999999988  469999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCC---------------
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ---------------  214 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~---------------  214 (296)
                      ||+|+.........++.+.+..|+.++.++++++++.+ ++||++||..+||.....+++|+.+.               
T Consensus        91 iHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~  169 (386)
T PLN02427         91 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESP  169 (386)
T ss_pred             EEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCcccccccccccccccccccc
Confidence            99999765444445566778899999999999998877 89999999999986433333332221               


Q ss_pred             -------CCCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          215 -------APINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       215 -------~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                             .+.+.|+.||.++|.++..+++.++++++++||++||||+.....+.. .+. .....+++.+++.+..++|
T Consensus       170 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~-~~~-~~~~~~i~~~~~~~~~~~~  246 (386)
T PLN02427        170 CIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGID-GPS-EGVPRVLACFSNNLLRREP  246 (386)
T ss_pred             cccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCcccccc-ccc-cccchHHHHHHHHHhcCCC
Confidence                   234679999999999999988888999999999999999854221100 000 0012577777788877777

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.96  E-value=5.9e-29  Score=213.26  Aligned_cols=204  Identities=17%  Similarity=0.152  Sum_probs=162.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +++++|||||+|||.++|++|+++|++|++++|+..+.+++.++++...  +.+++++.+|+++++++.++.++     .
T Consensus         6 ~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~--~v~v~vi~~DLs~~~~~~~l~~~l~~~~~   83 (265)
T COG0300           6 GKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT--GVEVEVIPADLSDPEALERLEDELKERGG   83 (265)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh--CceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence            4899999999999999999999999999999998888877777776653  35788999999999999888764     4


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      .+|++|||||.....+    .++..+++++.|+.+    |+.+++.|.+++.++||+++|.+.|           .|.+.
T Consensus        84 ~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~-----------~p~p~  152 (265)
T COG0300          84 PIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGL-----------IPTPY  152 (265)
T ss_pred             cccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhc-----------CCCcc
Confidence            7999999999876654    444455688899998    7779999999999999999999887           45566


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCCCCC-CCCCC---CcccccccccHHHHHHHHhCCCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDPEGR-LGEAP---RPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~~~~-~~~~~---~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      .+.|++||++...|+++++.|   .|++|+.|.||.+..+..+.. -....   .-.+-++..+....+..+..++.
T Consensus       153 ~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~k~  229 (265)
T COG0300         153 MAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGSDVYLLSPGELVLSPEDVAEAALKALEKGKR  229 (265)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccccccccccccchhhccCHHHHHHHHHHHHhcCCc
Confidence            889999999999999999988   789999999999998875311 00110   00111122466666777776665

>PLN02214 cinnamoyl-CoA reductase

Probab=99.96  E-value=4e-28  Score=220.20  Aligned_cols=179  Identities=26%  Similarity=0.303  Sum_probs=144.8

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      .+|+|+||||+||||++++++|+++|++|++++|+......  ..+..+.....++.++.+|++|.+++.+++  .++|+
T Consensus         9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d~   84 (342)
T PLN02214          9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKN--THLRELEGGKERLILCKADLQDYEALKAAI--DGCDG   84 (342)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhH--HHHHHhhCCCCcEEEEecCcCChHHHHHHH--hcCCE
Confidence            45899999999999999999999999999999986443211  111222111235888999999999999998  57999


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccc-ccccCCCC---CCCCCCC------CCCCCC
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTC-ATYGEPEK---MPITEET------PQAPIN  218 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~-~~~g~~~~---~~~~e~~------~~~~~~  218 (296)
                      |||+|+..     ..++.+.++.|+.++.++++++++.++++||++||. ++|+....   .+++|+.      +..+.+
T Consensus        85 Vih~A~~~-----~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~  159 (342)
T PLN02214         85 VFHTASPV-----TDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKN  159 (342)
T ss_pred             EEEecCCC-----CCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhcccccc
Confidence            99999864     235678899999999999999999998999999996 58875332   2467764      334677


Q ss_pred             hHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          219 PYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       219 ~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                      +|+.||.++|.+++.+++++|++++++||++||||+..
T Consensus       160 ~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~  197 (342)
T PLN02214        160 WYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQ  197 (342)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCC
Confidence            99999999999999998889999999999999999854

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.96  E-value=6.2e-28  Score=224.71  Aligned_cols=193  Identities=26%  Similarity=0.417  Sum_probs=153.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+|+||||+||||++|+++|+++|++|++++|.........   ..... ..+++++..|+.+..     +  .++|+||
T Consensus       121 mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~---~~~~~-~~~~~~~~~Di~~~~-----~--~~~D~Vi  189 (436)
T PLN02166        121 LRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENL---VHLFG-NPRFELIRHDVVEPI-----L--LEVDQIY  189 (436)
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHh---hhhcc-CCceEEEECcccccc-----c--cCCCEEE
Confidence            78999999999999999999999999999997543221111   11111 146788889997642     3  3699999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCC-----CCCCCCChHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE-----TPQAPINPYGKAKK  225 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~-----~~~~~~~~Y~~sK~  225 (296)
                      |+|+.........++.+.+++|+.+|.+++++|++.+. ++|++||.++||.....+.+|+     .|..+.+.|+.||.
T Consensus       190 HlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~  268 (436)
T PLN02166        190 HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKR  268 (436)
T ss_pred             ECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHH
Confidence            99997655444557788999999999999999999875 9999999999997665667776     35667789999999


Q ss_pred             HHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          226 MAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       226 ~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      ++|.+++.+.+..+++++++||++||||++...           .+.+++.++..+..+++
T Consensus       269 ~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~-----------~~~~i~~~i~~~l~~~~  318 (436)
T PLN02166        269 TAETLAMDYHRGAGVEVRIARIFNTYGPRMCLD-----------DGRVVSNFVAQTIRKQP  318 (436)
T ss_pred             HHHHHHHHHHHHhCCCeEEEEEccccCCCCCCC-----------ccchHHHHHHHHhcCCC
Confidence            999999999888899999999999999985311           12678888888888777

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=2.2e-28  Score=209.48  Aligned_cols=203  Identities=17%  Similarity=0.156  Sum_probs=164.6

Q ss_pred             CCCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc---
Q 022471           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (296)
Q Consensus        67 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (296)
                      +..+++||||||++|+|+++|.+|+++|+.++++|.+....++..+.+++.    ++++.+.||++|.+++.+..++   
T Consensus        35 ~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~----g~~~~y~cdis~~eei~~~a~~Vk~  110 (300)
T KOG1201|consen   35 SVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI----GEAKAYTCDISDREEIYRLAKKVKK  110 (300)
T ss_pred             hccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc----CceeEEEecCCCHHHHHHHHHHHHH
Confidence            334499999999999999999999999999999999988888777777654    3799999999999999888765   


Q ss_pred             --CCCcEEEEcccccCcCCCCcC----hHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCC
Q 022471          144 --NAFDAVMHFAAVAYVGESTLD----PLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (296)
Q Consensus       144 --~~~D~vi~~Ag~~~~~~~~~~----~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~  213 (296)
                        +.+|+||||||+.......+.    -+..+++|+.+    ++.++|.|.+.+.++||.++|++.+           .+
T Consensus       111 e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~-----------~g  179 (300)
T KOG1201|consen  111 EVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGL-----------FG  179 (300)
T ss_pred             hcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcc-----------cC
Confidence              889999999999776553333    34578899988    8889999999988999999998876           44


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc------CCCcEEEEecCeeecCCCC-----CCCCCCCCcccccccccHHHHHHHHh
Q 022471          214 QAPINPYGKAKKMAEDIILDFSKN------SDMAVMILRYFNVIGSDPE-----GRLGEAPRPELREHGRISGACFDAAR  282 (296)
Q Consensus       214 ~~~~~~Y~~sK~~~e~~~~~~~~~------~gi~~~~lrpg~v~Gp~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~  282 (296)
                      .....+|++||+|+..+.+++..|      .||+++.+.|+.+-...-.     +.+.+...     +..+...+++++.
T Consensus       180 ~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~~~~~~l~P~L~-----p~~va~~Iv~ai~  254 (300)
T KOG1201|consen  180 PAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGATPFPTLAPLLE-----PEYVAKRIVEAIL  254 (300)
T ss_pred             CccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCCCCCccccCCCC-----HHHHHHHHHHHHH
Confidence            556889999999999999999877      5799999999988644322     11222222     2267888899999


Q ss_pred             CCCCcce
Q 022471          283 GIIAGLK  289 (296)
Q Consensus       283 ~~~~~~~  289 (296)
                      .+++...
T Consensus       255 ~n~~~~~  261 (300)
T KOG1201|consen  255 TNQAGLL  261 (300)
T ss_pred             cCCcccc
Confidence            9888543

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.96  E-value=2.7e-28  Score=222.11  Aligned_cols=200  Identities=25%  Similarity=0.329  Sum_probs=155.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCe-EEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      |+||||||+||||++++++|+++|++ |+++++......  .+.+..+.. ..++.++.+|++|.+++.+++++.++|+|
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   77 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGN--LESLADVSD-SERYVFEHADICDRAELDRIFAQHQPDAV   77 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccch--HHHHHhccc-CCceEEEEecCCCHHHHHHHHHhcCCCEE
Confidence            47999999999999999999999986 555554321111  111111111 24578899999999999999976679999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEcccccccCCC----------CCCCCC
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH---------GVDTLIYSSTCATYGEPE----------KMPITE  210 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~---------~~~riV~~SS~~~~g~~~----------~~~~~e  210 (296)
                      ||+||..........+++.+++|+.++.++++++++.         +.+++|++||.++|+...          ..+++|
T Consensus        78 ih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E  157 (352)
T PRK10084         78 MHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTE  157 (352)
T ss_pred             EECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccc
Confidence            9999976544444567789999999999999999874         356899999999998531          124678


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          211 ETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       211 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      +.+..|.+.|+.||.++|.+++.+++++|++++++||++||||++..             ..+++.++..+..+.+
T Consensus       158 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~-------------~~~~~~~~~~~~~~~~  220 (352)
T PRK10084        158 TTAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFP-------------EKLIPLVILNALEGKP  220 (352)
T ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCc-------------cchHHHHHHHHhcCCC
Confidence            88888999999999999999999988899999999999999997421             1567777777766655

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.96  E-value=6.5e-29  Score=207.45  Aligned_cols=167  Identities=18%  Similarity=0.156  Sum_probs=141.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |.++|||||+|||.++|+.|+++|++|++++|+..+.+++.+++.+     ..+.....|++|.++++++++.     ++
T Consensus         7 kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~-----~~~~~~~~DVtD~~~~~~~i~~~~~~~g~   81 (246)
T COG4221           7 KVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA-----GAALALALDVTDRAAVEAAIEALPEEFGR   81 (246)
T ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc-----CceEEEeeccCCHHHHHHHHHHHHHhhCc
Confidence            8999999999999999999999999999999876655554444322     4688999999999997777754     78


Q ss_pred             CcEEEEcccccCcCC----CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGE----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +|+||||||.....+    ..+++..++++|+.|    ++.++|.|.+++.++||++||.+..           .+.+..
T Consensus        82 iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~-----------~~y~~~  150 (246)
T COG4221          82 IDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGR-----------YPYPGG  150 (246)
T ss_pred             ccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccc-----------ccCCCC
Confidence            999999999865533    455667788999999    6669999999988899999998764           456668


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGS  253 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp  253 (296)
                      +.|++||+++..|.+.++.|   .+|+++.|.||.|-..
T Consensus       151 ~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~  189 (246)
T COG4221         151 AVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETT  189 (246)
T ss_pred             ccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecce
Confidence            89999999999999999988   7999999999999554

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=1.1e-28  Score=213.19  Aligned_cols=172  Identities=19%  Similarity=0.193  Sum_probs=144.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+|+|||||+|||.++|.+|+++|++++.+.|+.++.+...+++++..+.. ++..+++|++|.+++++++++     +
T Consensus        12 ~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~-~v~~~~~Dvs~~~~~~~~~~~~~~~fg   90 (282)
T KOG1205|consen   12 GKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLE-KVLVLQLDVSDEESVKKFVEWAIRHFG   90 (282)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcC-ccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence            3999999999999999999999999999999998888888877777776543 799999999999999988855     8


Q ss_pred             CCcEEEEcccccCcCCCC----cChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~~----~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||+......+    ++....+++|+.|    |+.+++.|++++.++||.+||.+.+           .+.+.
T Consensus        91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~-----------~~~P~  159 (282)
T KOG1205|consen   91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGK-----------MPLPF  159 (282)
T ss_pred             CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccc-----------cCCCc
Confidence            999999999987643322    2233478899999    8889999999987899999998876           44555


Q ss_pred             CChHHHHHHHHHHHHHHhhhcC---C--CcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKNS---D--MAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~~---g--i~~~~lrpg~v~Gp~  254 (296)
                      .+.|++||+|.+.|.+.++.|.   +  +.+ ++.||.|-...
T Consensus       160 ~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~  201 (282)
T KOG1205|consen  160 RSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEF  201 (282)
T ss_pred             ccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecc
Confidence            6699999999999999999992   3  333 69999997764

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.96  E-value=4.2e-28  Score=237.37  Aligned_cols=202  Identities=21%  Similarity=0.289  Sum_probs=159.0

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHH-HHHHhhcCCC
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKA-VNKFFSENAF  146 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-v~~~~~~~~~  146 (296)
                      .+|+|||||||||||++++++|+++ |++|++++|.......       ... ..+++++.+|++|.++ +++++  .++
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~-------~~~-~~~~~~~~gDl~d~~~~l~~~l--~~~  383 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR-------FLG-HPRFHFVEGDISIHSEWIEYHI--KKC  383 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh-------hcC-CCceEEEeccccCcHHHHHHHh--cCC
Confidence            4589999999999999999999986 7999999985532111       111 1468899999998655 56667  479


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCC-------CCCCh
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ-------APINP  219 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~-------~~~~~  219 (296)
                      |+|||+||.........++...+++|+.++.++++++++.+ +++||+||.++||.....+++|+.+.       .|.+.
T Consensus       384 D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~  462 (660)
T PRK08125        384 DVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWI  462 (660)
T ss_pred             CEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccc
Confidence            99999999876555566778899999999999999999987 79999999999987655567777642       24568


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          220 YGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       220 Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      |+.||.++|.+++.+++++|++++++||++||||++........     ....+++.++..+..+++
T Consensus       463 Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~-----~~~~~i~~~i~~~~~~~~  524 (660)
T PRK08125        463 YSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARI-----GSSRAITQLILNLVEGSP  524 (660)
T ss_pred             hHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccc-----cccchHHHHHHHhcCCCC
Confidence            99999999999999988889999999999999998542110000     012678888888887776

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.96  E-value=5.6e-28  Score=217.68  Aligned_cols=184  Identities=23%  Similarity=0.360  Sum_probs=146.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      +|+||||||+||||++++++|+++|  ++|++++|+......    +..... ..++.++.+|++|.+++.+++  .++|
T Consensus         4 ~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~----~~~~~~-~~~~~~v~~Dl~d~~~l~~~~--~~iD   76 (324)
T TIGR03589         4 NKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWE----MQQKFP-APCLRFFIGDVRDKERLTRAL--RGVD   76 (324)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHH----HHHHhC-CCcEEEEEccCCCHHHHHHHH--hcCC
Confidence            3899999999999999999999986  789998875432211    111111 246889999999999999998  4699


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHH
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~  227 (296)
                      +|||+||.......+.++.+.+++|+.++.++++++.+.+.++||++||..              +..|.++|+.||+++
T Consensus        77 ~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~--------------~~~p~~~Y~~sK~~~  142 (324)
T TIGR03589        77 YVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDK--------------AANPINLYGATKLAS  142 (324)
T ss_pred             EEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCC--------------CCCCCCHHHHHHHHH
Confidence            999999976544455667789999999999999999998888999999953              234568899999999


Q ss_pred             HHHHHHhhh---cCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCCcceE
Q 022471          228 EDIILDFSK---NSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKV  290 (296)
Q Consensus       228 e~~~~~~~~---~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  290 (296)
                      |.+++.++.   +.|++++++|||+||||+.                .+++.+.+++..+.+.+++
T Consensus       143 E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~----------------~~i~~~~~~~~~~~~~~~i  192 (324)
T TIGR03589       143 DKLFVAANNISGSKGTRFSVVRYGNVVGSRG----------------SVVPFFKSLKEEGVTELPI  192 (324)
T ss_pred             HHHHHHHHhhccccCcEEEEEeecceeCCCC----------------CcHHHHHHHHHhCCCCeee
Confidence            999988653   4799999999999999862                5777888777766533433

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.96  E-value=7.1e-28  Score=210.73  Aligned_cols=185  Identities=24%  Similarity=0.251  Sum_probs=152.4

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      ++++|+|||||||||++|+++|+++||.|++..|++.+ ++..+.+.++...+.+...+..|++|.+++.+++  .++|.
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~-~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai--~gcdg   81 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPED-EKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAI--DGCDG   81 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcch-hhhHHHHHhcccCcccceEEeccccccchHHHHH--hCCCE
Confidence            44899999999999999999999999999999998766 3344456666655567899999999999999999  68999


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcccccccCC-----CCCCCCCCCCCCC------
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEP-----EKMPITEETPQAP------  216 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~~riV~~SS~~~~g~~-----~~~~~~e~~~~~~------  216 (296)
                      |||.|......... ...+..+..+.||.++++++++.. ++|||++||.+.....     ....++|+.-.+.      
T Consensus        82 VfH~Asp~~~~~~~-~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~  160 (327)
T KOG1502|consen   82 VFHTASPVDFDLED-PEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCK  160 (327)
T ss_pred             EEEeCccCCCCCCC-cHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhh
Confidence            99999987654433 344789999999999999999998 8999999997654322     2234555543221      


Q ss_pred             CChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCC
Q 022471          217 INPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEG  257 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~  257 (296)
                      ...|+.||..+|..+.+++++.+++.+++.|+.|+||....
T Consensus       161 ~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~  201 (327)
T KOG1502|consen  161 KLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQP  201 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCccc
Confidence            25799999999999999999999999999999999998653

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.96  E-value=1.4e-27  Score=216.29  Aligned_cols=181  Identities=22%  Similarity=0.290  Sum_probs=141.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +|+||||||+||||++++++|+++|++|++++|+........ .+..+. ...++.++.+|++|.+++.+++  .++|+|
T Consensus         9 ~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~--~~~d~v   84 (338)
T PLN00198          9 KKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIA-HLRALQ-ELGDLKIFGADLTDEESFEAPI--AGCDLV   84 (338)
T ss_pred             CCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHH-HHHhcC-CCCceEEEEcCCCChHHHHHHH--hcCCEE
Confidence            389999999999999999999999999998887653322111 111111 1135888999999999999988  579999


Q ss_pred             EEcccccCcCCCCcCh-HHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcccccccCCC----CCCCCCCC---------CC
Q 022471          150 MHFAAVAYVGESTLDP-LKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATYGEPE----KMPITEET---------PQ  214 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~-~~~~~~n~~~t~~ll~~~~~~-~~~riV~~SS~~~~g~~~----~~~~~e~~---------~~  214 (296)
                      ||+|+....  ...++ ...+++|+.++.++++++.+. +.++||++||.++|+...    ..+++|+.         +.
T Consensus        85 ih~A~~~~~--~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~  162 (338)
T PLN00198         85 FHVATPVNF--ASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEK  162 (338)
T ss_pred             EEeCCCCcc--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcC
Confidence            999995321  22233 346799999999999999886 478999999999997432    23444431         34


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                      +|.++|+.||.++|.+++.++++++++++++||++||||++.
T Consensus       163 ~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~  204 (338)
T PLN00198        163 PPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLT  204 (338)
T ss_pred             CccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCcc
Confidence            567889999999999999999889999999999999999854

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.96  E-value=2.8e-27  Score=216.74  Aligned_cols=175  Identities=23%  Similarity=0.296  Sum_probs=141.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+||||||||+||++++++|+++|++|++++|......      ..   ......++.+|++|.+.+.+++  .++|+||
T Consensus        22 ~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~------~~---~~~~~~~~~~Dl~d~~~~~~~~--~~~D~Vi   90 (370)
T PLN02695         22 LRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM------SE---DMFCHEFHLVDLRVMENCLKVT--KGVDHVF   90 (370)
T ss_pred             CEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc------cc---ccccceEEECCCCCHHHHHHHH--hCCCEEE
Confidence            89999999999999999999999999999997532111      00   0113567889999999988887  4799999


Q ss_pred             EcccccCcC-CCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCC----CCCCCCC--CCCCCChHHHH
Q 022471          151 HFAAVAYVG-ESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEK----MPITEET--PQAPINPYGKA  223 (296)
Q Consensus       151 ~~Ag~~~~~-~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~----~~~~e~~--~~~~~~~Y~~s  223 (296)
                      |+|+..... ....++...++.|+.++.++++++++.++++|||+||..+|+....    .++.|++  +..|.++|+.+
T Consensus        91 h~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~s  170 (370)
T PLN02695         91 NLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLE  170 (370)
T ss_pred             EcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHH
Confidence            999864321 2223445667899999999999999999999999999999986432    2355554  66788999999


Q ss_pred             HHHHHHHHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          224 KKMAEDIILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       224 K~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                      |.++|.+++.++.++|++++++||++||||+..
T Consensus       171 K~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~  203 (370)
T PLN02695        171 KLATEELCKHYTKDFGIECRIGRFHNIYGPFGT  203 (370)
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEECCccCCCCC
Confidence            999999999998888999999999999999753

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.96  E-value=2.4e-27  Score=212.85  Aligned_cols=204  Identities=47%  Similarity=0.798  Sum_probs=164.3

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEEE
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMH  151 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi~  151 (296)
                      +||||||+|+||++++++|+++|++|++++|..+........+..    ..++.++.+|+++.++++++++..++|+|||
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~   76 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGER----ITRVTFVEGDLRDRELLDRLFEEHKIDAVIH   76 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcc----ccceEEEECCCCCHHHHHHHHHhCCCcEEEE
Confidence            589999999999999999999999999887644332211111111    1257788999999999999997668999999


Q ss_pred             cccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 022471          152 FAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDII  231 (296)
Q Consensus       152 ~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~  231 (296)
                      |||..........+.+.++.|+.++.++++++.+.+.+++|++||.++|+.....+++|+.+..+.+.|+.+|.++|.++
T Consensus        77 ~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~  156 (328)
T TIGR01179        77 FAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERIL  156 (328)
T ss_pred             CccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHH
Confidence            99976554455567778999999999999999998888999999999998766667888888888999999999999999


Q ss_pred             HHhhhc-CCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhC
Q 022471          232 LDFSKN-SDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARG  283 (296)
Q Consensus       232 ~~~~~~-~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  283 (296)
                      +.++.+ .+++++++||+++|||...+.+++...+.    ..+++.+.....+
T Consensus       157 ~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~  205 (328)
T TIGR01179       157 RDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGI----THLIPYACQVAVG  205 (328)
T ss_pred             HHHHHhccCCCEEEEecCcccCCCCCCccccCCccc----chHHHHHHHHHHh
Confidence            999887 89999999999999998765544432222    2577777776653

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.96  E-value=1.8e-27  Score=216.83  Aligned_cols=181  Identities=22%  Similarity=0.259  Sum_probs=140.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      .|+||||||+||||++++++|+++|++|++++|+........+   ... ...++.++.+|++|.+.+.+++  .++|+|
T Consensus        10 ~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~~~-~~~~~~~~~~Dl~~~~~~~~~~--~~~d~V   83 (353)
T PLN02896         10 TGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLS---KWK-EGDRLRLFRADLQEEGSFDEAV--KGCDGV   83 (353)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH---hhc-cCCeEEEEECCCCCHHHHHHHH--cCCCEE
Confidence            3899999999999999999999999999998876433222221   111 1256889999999999999988  469999


Q ss_pred             EEcccccCcCC--CCcChHH-----HHHHHHHHHHHHHHHHHHcC-CCEEEEEcccccccCCCC-----CCCCCCCC---
Q 022471          150 MHFAAVAYVGE--STLDPLK-----YYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEPEK-----MPITEETP---  213 (296)
Q Consensus       150 i~~Ag~~~~~~--~~~~~~~-----~~~~n~~~t~~ll~~~~~~~-~~riV~~SS~~~~g~~~~-----~~~~e~~~---  213 (296)
                      ||+|+......  ...++..     .++.|+.++.++++++++.+ .++||++||.++||....     .+++|+.+   
T Consensus        84 ih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~  163 (353)
T PLN02896         84 FHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPI  163 (353)
T ss_pred             EECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcH
Confidence            99999764432  2234443     34455699999999998875 789999999999985321     34566521   


Q ss_pred             ------CCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          214 ------QAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       214 ------~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                            .++.++|+.||.++|.+++.++++++++++++||++||||+..
T Consensus       164 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~  212 (353)
T PLN02896        164 DHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLT  212 (353)
T ss_pred             HHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcC
Confidence                  1244689999999999999999889999999999999999754

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.96  E-value=6.7e-27  Score=218.15  Aligned_cols=193  Identities=27%  Similarity=0.412  Sum_probs=152.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+|||||||||||++|+++|+++|++|++++|......   +.+..... ..+++++.+|+.+..     +  .++|+||
T Consensus       120 ~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~---~~~~~~~~-~~~~~~i~~D~~~~~-----l--~~~D~Vi  188 (442)
T PLN02206        120 LRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRK---ENVMHHFS-NPNFELIRHDVVEPI-----L--LEVDQIY  188 (442)
T ss_pred             CEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccch---hhhhhhcc-CCceEEEECCccChh-----h--cCCCEEE
Confidence            79999999999999999999999999999987532211   11111111 246788899997752     2  3689999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCC-----CCCCCChHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET-----PQAPINPYGKAKK  225 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~-----~~~~~~~Y~~sK~  225 (296)
                      |+|+.........++.+.+++|+.++.++++++++.+. ++|++||..+|+.....+.+|+.     |..+.+.|+.||.
T Consensus       189 HlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~  267 (442)
T PLN02206        189 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR  267 (442)
T ss_pred             EeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHH
Confidence            99997655444557888999999999999999999885 99999999999876555666653     4455788999999


Q ss_pred             HHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          226 MAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       226 ~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      ++|.++..+.++++++++++||++||||+....           .+.+++.++.++..+++
T Consensus       268 ~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~-----------~~~~v~~~i~~~l~~~~  317 (442)
T PLN02206        268 TAETLTMDYHRGANVEVRIARIFNTYGPRMCID-----------DGRVVSNFVAQALRKEP  317 (442)
T ss_pred             HHHHHHHHHHHHhCCCeEEEEeccccCCCCCcc-----------ccchHHHHHHHHHcCCC
Confidence            999999998888899999999999999974311           12677888888877776

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.96  E-value=2.4e-27  Score=213.15  Aligned_cols=181  Identities=25%  Similarity=0.294  Sum_probs=141.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+||||||+||||++++++|+++|++|++++|+........ .+........++.++.+|++|.+.+.+++  .++|+||
T Consensus         5 ~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--~~~d~Vi   81 (322)
T PLN02662          5 KVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTE-HLLALDGAKERLHLFKANLLEEGSFDSVV--DGCEGVF   81 (322)
T ss_pred             CEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHH-HHHhccCCCCceEEEeccccCcchHHHHH--cCCCEEE
Confidence            88999999999999999999999999999988654322111 11111111246889999999999999998  5799999


Q ss_pred             EcccccCcCCCCcCh-HHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcccc--cccCC---CCCCCCCCCCCCC------C
Q 022471          151 HFAAVAYVGESTLDP-LKYYHNITSNTLVVLESMARH-GVDTLIYSSTCA--TYGEP---EKMPITEETPQAP------I  217 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~-~~~~~~n~~~t~~ll~~~~~~-~~~riV~~SS~~--~~g~~---~~~~~~e~~~~~~------~  217 (296)
                      |+|+....  ....+ ...+++|+.++.++++++++. ++++||++||.+  +|+..   ...+++|+.+..|      .
T Consensus        82 h~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~  159 (322)
T PLN02662         82 HTASPFYH--DVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESK  159 (322)
T ss_pred             EeCCcccC--CCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhccc
Confidence            99996532  22234 378899999999999999987 788999999976  36532   2235677665444      2


Q ss_pred             ChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          218 NPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                      +.|+.||.++|.+++.+.++++++++++||+++|||+..
T Consensus       160 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~  198 (322)
T PLN02662        160 LWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQ  198 (322)
T ss_pred             chHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCC
Confidence            589999999999999998889999999999999999743

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.96  E-value=2.1e-27  Score=233.20  Aligned_cols=200  Identities=27%  Similarity=0.401  Sum_probs=160.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhC--CCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      |+|||||||||||++++++|+++  |++|++++|.... .... .+.... ...++.++.+|++|.+.+.+++...++|+
T Consensus         7 ~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~-~~~~-~l~~~~-~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~   83 (668)
T PLN02260          7 KNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYC-SNLK-NLNPSK-SSPNFKFVKGDIASADLVNYLLITEGIDT   83 (668)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCcc-chhh-hhhhcc-cCCCeEEEECCCCChHHHHHHHhhcCCCE
Confidence            89999999999999999999998  6899988864211 1111 111111 12468899999999998888775568999


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcccccccCCCCCC---CCCCCCCCCCChHHHHH
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEPEKMP---ITEETPQAPINPYGKAK  224 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~~riV~~SS~~~~g~~~~~~---~~e~~~~~~~~~Y~~sK  224 (296)
                      |||+|+.........++.+.+++|+.+|.++++++++.+ .+++||+||..+||.....+   .+|+.+..|.++|+.||
T Consensus        84 ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK  163 (668)
T PLN02260         84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATK  163 (668)
T ss_pred             EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHH
Confidence            999999876554555667889999999999999999887 78999999999998765432   35666777889999999


Q ss_pred             HHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          225 KMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       225 ~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      .++|.+++.+.++++++++++||++||||++..             ..+++.++..+..+++
T Consensus       164 ~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~-------------~~~i~~~~~~a~~g~~  212 (668)
T PLN02260        164 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP-------------EKLIPKFILLAMQGKP  212 (668)
T ss_pred             HHHHHHHHHHHHHcCCCEEEECcccccCcCCCc-------------ccHHHHHHHHHhCCCC
Confidence            999999999988889999999999999997531             1577888887777765

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.96  E-value=3.4e-27  Score=211.10  Aligned_cols=199  Identities=29%  Similarity=0.425  Sum_probs=158.1

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +|+||||||+||++++++|+++|  ++|++++|......  .+.++.... ..++.++.+|++|.+++.++++..++|+|
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~d~v   77 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGN--LENLADLED-NPRYRFVKGDIGDRELVSRLFTEHQPDAV   77 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchh--hhhhhhhcc-CCCcEEEEcCCcCHHHHHHHHhhcCCCEE
Confidence            48999999999999999999987  78988876422111  111122211 24678899999999999999865569999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcccccccCCCCC-CCCCCCCCCCCChHHHHHHHH
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSSTCATYGEPEKM-PITEETPQAPINPYGKAKKMA  227 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS~~~~g~~~~~-~~~e~~~~~~~~~Y~~sK~~~  227 (296)
                      ||+|+........+.+...+++|+.++.++++++.+.+.+ ++|++||..+||..... +++|+.+..|.+.|+.+|.++
T Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~  157 (317)
T TIGR01181        78 VHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAAS  157 (317)
T ss_pred             EEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHH
Confidence            9999976655555677788999999999999999887543 89999999999865433 578888888889999999999


Q ss_pred             HHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          228 EDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       228 e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      |.+++.++.+.+++++++||+.+|||+...             ..+++.++..+..+.+
T Consensus       158 e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~-------------~~~~~~~~~~~~~~~~  203 (317)
T TIGR01181       158 DHLVRAYHRTYGLPALITRCSNNYGPYQFP-------------EKLIPLMITNALAGKP  203 (317)
T ss_pred             HHHHHHHHHHhCCCeEEEEeccccCCCCCc-------------ccHHHHHHHHHhcCCC
Confidence            999999988899999999999999997421             1567777777776655

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.96  E-value=3.7e-27  Score=212.08  Aligned_cols=182  Identities=23%  Similarity=0.258  Sum_probs=141.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+|+||||+|+||++++++|+++|++|+++.|+........+... ......+++++.+|++|.+++.+++  .++|+||
T Consensus         6 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~--~~~d~vi   82 (322)
T PLN02986          6 KLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLA-LDGAKERLKLFKADLLEESSFEQAI--EGCDAVF   82 (322)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHh-ccCCCCceEEEecCCCCcchHHHHH--hCCCEEE
Confidence            899999999999999999999999999988886554332222111 1111246889999999999999998  4699999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcccccc--cCC---CCCCCCCCCCCC------CCC
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATY--GEP---EKMPITEETPQA------PIN  218 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-~~~riV~~SS~~~~--g~~---~~~~~~e~~~~~------~~~  218 (296)
                      |+|+..... ..+...+.++.|+.++.++++++++. +++|||++||.++|  +..   ...+++|+.+..      +.+
T Consensus        83 h~A~~~~~~-~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~  161 (322)
T PLN02986         83 HTASPVFFT-VKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKN  161 (322)
T ss_pred             EeCCCcCCC-CCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhcccc
Confidence            999974321 12222457899999999999999885 67899999998754  332   123466655432      357


Q ss_pred             hHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          219 PYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       219 ~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                      .|+.||.++|.+++.+.++++++++++||++||||...
T Consensus       162 ~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~  199 (322)
T PLN02986        162 WYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQ  199 (322)
T ss_pred             chHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCC
Confidence            89999999999999998889999999999999999743

>PLN02650 dihydroflavonol-4-reductase

Probab=99.96  E-value=2.5e-27  Score=215.73  Aligned_cols=182  Identities=20%  Similarity=0.242  Sum_probs=140.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+||||||+||||++++++|+++|++|++++|+........... .......++.++.+|++|.+.+++++  .++|+||
T Consensus         6 k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~v~~Dl~d~~~~~~~~--~~~d~Vi   82 (351)
T PLN02650          6 ETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLL-DLPGATTRLTLWKADLAVEGSFDDAI--RGCTGVF   82 (351)
T ss_pred             CEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHH-hccCCCCceEEEEecCCChhhHHHHH--hCCCEEE
Confidence            79999999999999999999999999999988654433222211 11111135788999999999999988  4699999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcccccccCC-CCCC-CCCCCC---------CCCCC
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEP-EKMP-ITEETP---------QAPIN  218 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~~riV~~SS~~~~g~~-~~~~-~~e~~~---------~~~~~  218 (296)
                      |+|+..... ..+.....+++|+.++.++++++.+.+ .++|||+||.++|+.. ...+ ++|+..         ..+.+
T Consensus        83 H~A~~~~~~-~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  161 (351)
T PLN02650         83 HVATPMDFE-SKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGW  161 (351)
T ss_pred             EeCCCCCCC-CCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccc
Confidence            999864322 122234688999999999999999876 6899999998777543 2222 355421         12456


Q ss_pred             hHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          219 PYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       219 ~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                      +|+.||.++|.+++.+++++|++++++||++||||+..
T Consensus       162 ~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~  199 (351)
T PLN02650        162 MYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFIS  199 (351)
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCC
Confidence            89999999999999999889999999999999999753

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.95  E-value=4.1e-27  Score=210.52  Aligned_cols=189  Identities=21%  Similarity=0.302  Sum_probs=140.1

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHH----HHHhhc---CC
Q 022471           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAV----NKFFSE---NA  145 (296)
Q Consensus        73 vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v----~~~~~~---~~  145 (296)
                      ||||||+|+||++|+++|+++|++++++.|+.......             ..+..+|+.|..+.    ++++..   .+
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   68 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-------------VNLVDLDIADYMDKEDFLAQIMAGDDFGD   68 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-------------HhhhhhhhhhhhhHHHHHHHHhcccccCC
Confidence            89999999999999999999999776665443221100             11223555554333    233321   37


Q ss_pred             CcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHH
Q 022471          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKK  225 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~  225 (296)
                      +|+|||+||.....  ..+....++.|+.++.+++++|++.+. ++|++||.++|+.....+.+|+.+..|.++|+.||.
T Consensus        69 ~d~Vih~A~~~~~~--~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~  145 (308)
T PRK11150         69 IEAIFHEGACSSTT--EWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKF  145 (308)
T ss_pred             ccEEEECceecCCc--CCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHH
Confidence            99999999965432  224456789999999999999999886 799999999998765556778778888999999999


Q ss_pred             HHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          226 MAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       226 ~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      ++|++++.++.+.+++++++||++||||++... + .       ...++..+.+.+.++++
T Consensus       146 ~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~-~-~-------~~~~~~~~~~~~~~~~~  197 (308)
T PRK11150        146 LFDEYVRQILPEANSQICGFRYFNVYGPREGHK-G-S-------MASVAFHLNNQLNNGEN  197 (308)
T ss_pred             HHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCC-C-c-------cchhHHHHHHHHhcCCC
Confidence            999999999888899999999999999985321 0 0       01455566667776654

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.95  E-value=1.1e-26  Score=207.52  Aligned_cols=193  Identities=32%  Similarity=0.496  Sum_probs=155.8

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCC-cEEE
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF-DAVM  150 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~-D~vi  150 (296)
                      +||||||+||||++++++|+++|++|++++|.........          ..+.++.+|++|.+.+.++.+  .. |+||
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----------~~~~~~~~d~~~~~~~~~~~~--~~~d~vi   69 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL----------SGVEFVVLDLTDRDLVDELAK--GVPDAVI   69 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc----------cccceeeecccchHHHHHHHh--cCCCEEE
Confidence            4999999999999999999999999999998665433211          357788999999988887774  34 9999


Q ss_pred             EcccccCcCCCCc-ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCC-CCCCCCCC-CCCCCCChHHHHHHHH
Q 022471          151 HFAAVAYVGESTL-DPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEP-EKMPITEE-TPQAPINPYGKAKKMA  227 (296)
Q Consensus       151 ~~Ag~~~~~~~~~-~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~-~~~~~~e~-~~~~~~~~Y~~sK~~~  227 (296)
                      |+|+......... ++.+.++.|+.++.++++++++.+++++||+||.++|+.. ...+++|+ .+..|.++|+.||.++
T Consensus        70 h~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~  149 (314)
T COG0451          70 HLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAA  149 (314)
T ss_pred             EccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHH
Confidence            9999876544333 4567999999999999999999889999998888877654 33367887 6777777999999999


Q ss_pred             HHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          228 EDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       228 e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      |..++.+..++|++++++||++||||++...+.          ..++..++..+..+.|
T Consensus       150 E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~----------~~~~~~~~~~~~~~~~  198 (314)
T COG0451         150 EQLLRAYARLYGLPVVILRPFNVYGPGDKPDLS----------SGVVSAFIRQLLKGEP  198 (314)
T ss_pred             HHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCC----------cCcHHHHHHHHHhCCC
Confidence            999999988889999999999999999654300          1466666666666665

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.95  E-value=3.7e-27  Score=198.88  Aligned_cols=200  Identities=27%  Similarity=0.407  Sum_probs=170.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhC--CCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      ++++||||.||||++.+..++..  .++.+.++...-...  .+.+++... ..+..+++.|+.+...+..++....+|.
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~--~~~l~~~~n-~p~ykfv~~di~~~~~~~~~~~~~~id~   83 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN--LKNLEPVRN-SPNYKFVEGDIADADLVLYLFETEEIDT   83 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc--cchhhhhcc-CCCceEeeccccchHHHHhhhccCchhh
Confidence            78999999999999999999986  566776664332221  233333322 3788999999999999999998889999


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcccccccCCCCCCCC-CCCCCCCCChHHHHHHH
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATYGEPEKMPIT-EETPQAPINPYGKAKKM  226 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-~~~riV~~SS~~~~g~~~~~~~~-e~~~~~~~~~Y~~sK~~  226 (296)
                      |+|.|+..+...+.-++.+..+.|+.+|..|++.++.. +.+++|++||..|||+.+..... |...+.|.++|++||+|
T Consensus        84 vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaA  163 (331)
T KOG0747|consen   84 VIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAA  163 (331)
T ss_pred             hhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHHHHH
Confidence            99999998888888888999999999999999999988 57899999999999998776655 78888999999999999


Q ss_pred             HHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          227 AEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       227 ~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      +|++.+++...+|++++++|-++||||+....             .+||.|++.+..+.+
T Consensus       164 aE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~-------------klipkFi~l~~~~~~  210 (331)
T KOG0747|consen  164 AEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPE-------------KLIPKFIKLAMRGKE  210 (331)
T ss_pred             HHHHHHHHhhccCCcEEEEeccCccCCCcChH-------------HHhHHHHHHHHhCCC
Confidence            99999999999999999999999999985422             899999998887776

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.95  E-value=1.6e-26  Score=206.09  Aligned_cols=160  Identities=21%  Similarity=0.252  Sum_probs=135.8

Q ss_pred             EEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEEEcc
Q 022471           74 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFA  153 (296)
Q Consensus        74 lVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi~~A  153 (296)
                      |||||||+||++|+++|+++|++|+++.+.                       ..+|++|.++++++++..++|+|||+|
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~-----------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A   57 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH-----------------------KELDLTRQADVEAFFAKEKPTYVILAA   57 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc-----------------------ccCCCCCHHHHHHHHhccCCCEEEEee
Confidence            699999999999999999999998765321                       148999999999998777799999999


Q ss_pred             cccCc-CCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCC----CCCCCC-hHHHHHHHH
Q 022471          154 AVAYV-GESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET----PQAPIN-PYGKAKKMA  227 (296)
Q Consensus       154 g~~~~-~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~----~~~~~~-~Y~~sK~~~  227 (296)
                      +.... ......+.+.++.|+.++.++++++++.+.+++|++||..+|+.....+++|+.    +..|.+ .|+.||.++
T Consensus        58 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~  137 (306)
T PLN02725         58 AKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAG  137 (306)
T ss_pred             eeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHH
Confidence            97543 223456678899999999999999999998999999999999876666788875    444444 599999999


Q ss_pred             HHHHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          228 EDIILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       228 e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                      |.+++.+.++++++++++||++||||++.
T Consensus       138 e~~~~~~~~~~~~~~~~~R~~~vyG~~~~  166 (306)
T PLN02725        138 IKMCQAYRIQYGWDAISGMPTNLYGPHDN  166 (306)
T ss_pred             HHHHHHHHHHhCCCEEEEEecceeCCCCC
Confidence            99999988888999999999999999853

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.95  E-value=7.5e-27  Score=206.59  Aligned_cols=175  Identities=27%  Similarity=0.329  Sum_probs=141.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+||||||+|+||+++.++|.++|++|+.++|.                        ..|++|.+++.+++++.++|+||
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~------------------------~~dl~d~~~~~~~~~~~~pd~Vi   56 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS------------------------DLDLTDPEAVAKLLEAFKPDVVI   56 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT------------------------CS-TTSHHHHHHHHHHH--SEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch------------------------hcCCCCHHHHHHHHHHhCCCeEe
Confidence            689999999999999999999999999988642                        58999999999999887899999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  230 (296)
                      ||||......++.+++..+.+|+.++.++++++.+.+. ++||+||..||++....+++|++++.|.+.||.+|+.+|..
T Consensus        57 n~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~  135 (286)
T PF04321_consen   57 NCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQA  135 (286)
T ss_dssp             E------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHH
T ss_pred             ccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHH
Confidence            99999888788889999999999999999999999885 99999999999888788899999999999999999999999


Q ss_pred             HHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCCcceE
Q 022471          231 ILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKV  290 (296)
Q Consensus       231 ~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  290 (296)
                      +++..    -+..++|++++||+...               .++..+++.+.++++ +.+
T Consensus       136 v~~~~----~~~~IlR~~~~~g~~~~---------------~~~~~~~~~~~~~~~-i~~  175 (286)
T PF04321_consen  136 VRAAC----PNALILRTSWVYGPSGR---------------NFLRWLLRRLRQGEP-IKL  175 (286)
T ss_dssp             HHHH-----SSEEEEEE-SEESSSSS---------------SHHHHHHHHHHCTSE-EEE
T ss_pred             HHHhc----CCEEEEecceecccCCC---------------chhhhHHHHHhcCCe-eEe
Confidence            98832    37999999999999421               789999999988877 444

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.95  E-value=2.7e-26  Score=204.47  Aligned_cols=200  Identities=27%  Similarity=0.356  Sum_probs=163.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      +.+++||||+||+|.+++++|++++  .+|.++|..+....-..+....   ....+.++.+|+.|...+.+++  .++ 
T Consensus         4 ~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~---~~~~v~~~~~D~~~~~~i~~a~--~~~-   77 (361)
T KOG1430|consen    4 KLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF---RSGRVTVILGDLLDANSISNAF--QGA-   77 (361)
T ss_pred             CCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc---cCCceeEEecchhhhhhhhhhc--cCc-
Confidence            3789999999999999999999998  7999999765422211111111   2468999999999999999999  567 


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCC-CCCCCCCCCC--CCChHHHHH
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEK-MPITEETPQA--PINPYGKAK  224 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~-~~~~e~~~~~--~~~~Y~~sK  224 (296)
                      .|+|+|+.........+.+..+++|+.||.+++++|++.+++++||+||..|...... ..-+|+.|.+  ...+|+.||
T Consensus        78 ~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sK  157 (361)
T KOG1430|consen   78 VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESK  157 (361)
T ss_pred             eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHH
Confidence            8999998776666666788899999999999999999999999999999998765544 3445554443  345999999


Q ss_pred             HHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCCcceE
Q 022471          225 KMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKV  290 (296)
Q Consensus       225 ~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  290 (296)
                      +.+|.++++.....++..++|||..||||++.               .+++.+.+.+..+...+++
T Consensus       158 a~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~---------------~~~~~i~~~~~~g~~~f~~  208 (361)
T KOG1430|consen  158 ALAEKLVLEANGSDDLYTCALRPPGIYGPGDK---------------RLLPKIVEALKNGGFLFKI  208 (361)
T ss_pred             HHHHHHHHHhcCCCCeeEEEEccccccCCCCc---------------cccHHHHHHHHccCceEEe
Confidence            99999999987667799999999999999965               7899999999998886554

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.95  E-value=7.2e-26  Score=200.27  Aligned_cols=155  Identities=26%  Similarity=0.333  Sum_probs=135.8

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEEE
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMH  151 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi~  151 (296)
                      +||||||||+||++++++|+++|++|++++|.                        .+|+.|.++++++++..++|+|||
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~------------------------~~d~~~~~~~~~~~~~~~~d~vi~   56 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS------------------------QLDLTDPEALERLLRAIRPDAVVN   56 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc------------------------ccCCCCHHHHHHHHHhCCCCEEEE
Confidence            48999999999999999999999999998752                        479999999999997667899999


Q ss_pred             cccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 022471          152 FAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDII  231 (296)
Q Consensus       152 ~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~  231 (296)
                      +||..........+...+++|+.++.++++++++.+. ++|++||.++|+.....+++|+.+..+.+.|+.+|.++|.++
T Consensus        57 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~  135 (287)
T TIGR01214        57 TAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAI  135 (287)
T ss_pred             CCccccccccccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHH
Confidence            9997654444456677899999999999999998874 899999999998766678889888888999999999999999


Q ss_pred             HHhhhcCCCcEEEEecCeeecCCC
Q 022471          232 LDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       232 ~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                      +.+    +.+++++||++||||+.
T Consensus       136 ~~~----~~~~~ilR~~~v~G~~~  155 (287)
T TIGR01214       136 RAA----GPNALIVRTSWLYGGGG  155 (287)
T ss_pred             HHh----CCCeEEEEeeecccCCC
Confidence            874    67899999999999974

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.94  E-value=9e-26  Score=194.70  Aligned_cols=173  Identities=24%  Similarity=0.290  Sum_probs=156.7

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEEE
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMH  151 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi~  151 (296)
                      +|||||++|.+|.+|++.|. .+++|+.++|.                        .+|++|.+.+.+++.+.++|+|||
T Consensus         2 ~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~------------------------~~Ditd~~~v~~~i~~~~PDvVIn   56 (281)
T COG1091           2 KILITGANGQLGTELRRALP-GEFEVIATDRA------------------------ELDITDPDAVLEVIRETRPDVVIN   56 (281)
T ss_pred             cEEEEcCCChHHHHHHHHhC-CCceEEeccCc------------------------cccccChHHHHHHHHhhCCCEEEE
Confidence            49999999999999999998 77899988641                        289999999999999889999999


Q ss_pred             cccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 022471          152 FAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDII  231 (296)
Q Consensus       152 ~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~  231 (296)
                      +|+......++.+++..|.+|..++.++++++.+.|. ++||+||-.||++....++.|++++.|.+.||.||++.|..+
T Consensus        57 ~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v  135 (281)
T COG1091          57 AAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAV  135 (281)
T ss_pred             CccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHH
Confidence            9999999899999999999999999999999999986 899999999998888889999999999999999999999999


Q ss_pred             HHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCCcceE
Q 022471          232 LDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKV  290 (296)
Q Consensus       232 ~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  290 (296)
                      ++    .+-+..++|.++|||....               .|+..+++.+..+++ +.+
T Consensus       136 ~~----~~~~~~I~Rtswv~g~~g~---------------nFv~tml~la~~~~~-l~v  174 (281)
T COG1091         136 RA----AGPRHLILRTSWVYGEYGN---------------NFVKTMLRLAKEGKE-LKV  174 (281)
T ss_pred             HH----hCCCEEEEEeeeeecCCCC---------------CHHHHHHHHhhcCCc-eEE
Confidence            88    4567999999999998731               788888888888877 444

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.94  E-value=6.9e-26  Score=203.14  Aligned_cols=184  Identities=14%  Similarity=0.065  Sum_probs=142.2

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|+++||||++|||++++++|+++|++|++++|+..+.++..+.+.+..+ +.++.++.+|++|.+++++++++     
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~-~~~v~~~~~Dl~d~~sv~~~~~~~~~~~   91 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVP-DAKLSLRALDLSSLASVAALGEQLRAEG   91 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC-CCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence            349999999999999999999999999999999876655555555544322 24688999999999999988765     


Q ss_pred             CCCcEEEEcccccCcC---CCCcChHHHHHHHHHHHH----HHHHHHHHcCCCEEEEEccccccc-CCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVG---ESTLDPLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYG-EPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~---~~~~~~~~~~~~n~~~t~----~ll~~~~~~~~~riV~~SS~~~~g-~~~~~~~~e~~~~~  215 (296)
                      +++|+||||||+....   ...+..+..+++|+.+..    .+++.|++. .++||++||.+.+. ......+.++.+..
T Consensus        92 ~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~~~~~~~~~~  170 (313)
T PRK05854         92 RPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWDDLNWERSYA  170 (313)
T ss_pred             CCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCcccccccccCc
Confidence            6799999999986432   244667778999999954    455555554 46999999976643 22223344444556


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc-----CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN-----SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~-----~gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.||++.+.++++++.+     .||++++++||.|..+.
T Consensus       171 ~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~  214 (313)
T PRK05854        171 GMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNL  214 (313)
T ss_pred             chhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCc
Confidence            6789999999999999999863     57999999999997754

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.94  E-value=2.2e-25  Score=200.51  Aligned_cols=172  Identities=26%  Similarity=0.377  Sum_probs=144.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+|+||||+|+||++++++|+++|++|++++|+.......    .     ...++++.+|++|.+++.+++  .++|+||
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~-----~~~~~~~~~D~~~~~~l~~~~--~~~d~vi   69 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----E-----GLDVEIVEGDLRDPASLRKAV--AGCRALF   69 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----c-----cCCceEEEeeCCCHHHHHHHH--hCCCEEE
Confidence            4799999999999999999999999999999865432111    0     135788999999999999988  5799999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccC-CCCCCCCCCCCCCC---CChHHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGE-PEKMPITEETPQAP---INPYGKAKKM  226 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~-~~~~~~~e~~~~~~---~~~Y~~sK~~  226 (296)
                      |+|+...  ....++...++.|+.++.++++++++.+.+++|++||.++|+. ....+++|+.+..+   .+.|+.+|.+
T Consensus        70 ~~a~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~  147 (328)
T TIGR03466        70 HVAADYR--LWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFL  147 (328)
T ss_pred             Eeceecc--cCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHH
Confidence            9998542  2344677889999999999999999988899999999999985 34456777776554   4689999999


Q ss_pred             HHHHHHHhhhcCCCcEEEEecCeeecCCC
Q 022471          227 AEDIILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       227 ~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                      +|.+++.++.+++++++++||+++|||++
T Consensus       148 ~e~~~~~~~~~~~~~~~ilR~~~~~G~~~  176 (328)
T TIGR03466       148 AEQAALEMAAEKGLPVVIVNPSTPIGPRD  176 (328)
T ss_pred             HHHHHHHHHHhcCCCEEEEeCCccCCCCC
Confidence            99999999888899999999999999985

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02583 cinnamoyl-CoA reductase

Probab=99.94  E-value=1.2e-25  Score=200.09  Aligned_cols=181  Identities=15%  Similarity=0.129  Sum_probs=139.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+|+||||+|+||++++++|+++|++|+++.|+.... ...+.+..+...+.++.++.+|++|.+++.+++  .++|.|+
T Consensus         7 k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~-~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l--~~~d~v~   83 (297)
T PLN02583          7 KSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGET-EIEKEIRGLSCEEERLKVFDVDPLDYHSILDAL--KGCSGLF   83 (297)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhh-hHHHHHHhcccCCCceEEEEecCCCHHHHHHHH--cCCCEEE
Confidence            7999999999999999999999999999998753221 122222222212346888999999999999988  5799999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccccccc-C-C---CCCCCCCCCCCCC------CC
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATYG-E-P---EKMPITEETPQAP------IN  218 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-~~~riV~~SS~~~~g-~-~---~~~~~~e~~~~~~------~~  218 (296)
                      |.++....  ......+.+++|+.++.++++++.+. +.++||++||.+.+. . .   ...+++|+.+..+      ..
T Consensus        84 ~~~~~~~~--~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  161 (297)
T PLN02583         84 CCFDPPSD--YPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKL  161 (297)
T ss_pred             EeCccCCc--ccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhccc
Confidence            98764322  12245678999999999999999886 578999999987643 1 1   1234666544322      23


Q ss_pred             hHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          219 PYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       219 ~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                      .|+.||..+|+++..++++.|+++++|||++||||+..
T Consensus       162 ~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~  199 (297)
T PLN02583        162 WHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLT  199 (297)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCC
Confidence            79999999999999998878999999999999999854

>PLN02686 cinnamoyl-CoA reductase

Probab=99.94  E-value=7.5e-26  Score=207.12  Aligned_cols=184  Identities=17%  Similarity=0.190  Sum_probs=139.4

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCC---CCCceEEEEccCCCHHHHHHHhhcCC
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP---EPGRLQFIYADLGDAKAVNKFFSENA  145 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~v~~~~~~~~  145 (296)
                      .+|+||||||+||||++++++|+++|++|+++.|+....... +.+.....   ...++.++.+|++|.+++.+++  .+
T Consensus        52 ~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i--~~  128 (367)
T PLN02686         52 EARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAF--DG  128 (367)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHH--Hh
Confidence            458999999999999999999999999999887754322211 11111100   0125788999999999999998  46


Q ss_pred             CcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccc--ccccCC--CC--CCCCCCC------
Q 022471          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVDTLIYSSTC--ATYGEP--EK--MPITEET------  212 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-~~~riV~~SS~--~~~g~~--~~--~~~~e~~------  212 (296)
                      +|.|||+|+...............+.|+.++.++++++++. +++|+|++||.  .+|+..  ..  ..++|+.      
T Consensus       129 ~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~  208 (367)
T PLN02686        129 CAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESF  208 (367)
T ss_pred             ccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhh
Confidence            99999999976433222222355678999999999999986 68999999996  467642  11  2345532      


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCC
Q 022471          213 PQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       213 ~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                      +..|.++|+.||.++|.+++.+++++|++++++||++||||+.
T Consensus       209 ~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~  251 (367)
T PLN02686        209 CRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGF  251 (367)
T ss_pred             cccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCC
Confidence            3345678999999999999999888999999999999999975

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.94  E-value=8.2e-26  Score=197.82  Aligned_cols=172  Identities=16%  Similarity=0.107  Sum_probs=136.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----CC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NA  145 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~  145 (296)
                      +|++|||||+||||++++++|+++|++|++++|+..+.++..+.++...  +.++.++.+|++|.+++++++++    ++
T Consensus         8 ~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~   85 (263)
T PRK08339          8 GKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSES--NVDVSYIVADLTKREDLERTVKELKNIGE   85 (263)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc--CCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence            3899999999999999999999999999999986554444444333221  34688999999999999888865    67


Q ss_pred             CcEEEEcccccCcCC----CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGE----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +|++|||||......    ..++....+++|+.+    ++.+++.|++.+.++||++||.+.+           .+.+..
T Consensus        86 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~-----------~~~~~~  154 (263)
T PRK08339         86 PDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIK-----------EPIPNI  154 (263)
T ss_pred             CcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCcccc-----------CCCCcc
Confidence            999999999754332    234455677888777    6667788887777899999998764           233346


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..|+.+|.+.+.+++.++.|   +||++++|.||.|..+.
T Consensus       155 ~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~  194 (263)
T PRK08339        155 ALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDR  194 (263)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHH
Confidence            78999999999999999988   68999999999997763

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.94  E-value=7.1e-26  Score=191.14  Aligned_cols=197  Identities=27%  Similarity=0.420  Sum_probs=163.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      ++|+||||+||||+|||+.|..+||.|+++|.--....+..+   .... ..+++.+.-|+..+     ++  ..+|.|+
T Consensus        28 lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~---~~~~-~~~fel~~hdv~~p-----l~--~evD~Iy   96 (350)
T KOG1429|consen   28 LRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLE---HWIG-HPNFELIRHDVVEP-----LL--KEVDQIY   96 (350)
T ss_pred             cEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcc---hhcc-CcceeEEEeechhH-----HH--HHhhhhh
Confidence            899999999999999999999999999999864333222221   1111 25677777777655     55  3589999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCC-----CCCCCChHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET-----PQAPINPYGKAKK  225 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~-----~~~~~~~Y~~sK~  225 (296)
                      |+|+...+.....++.+++..|+.+|.+++-++++-+ +|+++.||+.+||++...|..|+.     |..+.+.|...|.
T Consensus        97 hLAapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr  175 (350)
T KOG1429|consen   97 HLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKR  175 (350)
T ss_pred             hhccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHH
Confidence            9999988888888999999999999999999999887 799999999999987666655543     4567889999999


Q ss_pred             HHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCCcceEE
Q 022471          226 MAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVC  291 (296)
Q Consensus       226 ~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  291 (296)
                      .+|.++.++.++.|+.+.+.|+.+.|||.....           +++++..|+.++++++| +++|
T Consensus       176 ~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~-----------dgrvvsnf~~q~lr~ep-ltv~  229 (350)
T KOG1429|consen  176 VAETLCYAYHKQEGIEVRIARIFNTYGPRMHMD-----------DGRVVSNFIAQALRGEP-LTVY  229 (350)
T ss_pred             HHHHHHHHhhcccCcEEEEEeeecccCCccccC-----------CChhhHHHHHHHhcCCC-eEEE
Confidence            999999999999999999999999999985432           14999999999999999 7775

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.1e-25  Score=196.47  Aligned_cols=171  Identities=20%  Similarity=0.207  Sum_probs=134.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+++||||+||||++++++|+++|++|++++|+....++..+.++   ..+.++.++.+|++|.+++++++++     +
T Consensus         6 ~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~---~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   82 (275)
T PRK05876          6 GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLR---AEGFDVHGVMCDVRHREEVTHLADEAFRLLG   82 (275)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH---hcCCeEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            4899999999999999999999999999999976544433333332   2235688899999999999888765     5


Q ss_pred             CCcEEEEcccccCcCCCC----cChHHHHHHHHHHHHHHHHH----HHHcC-CCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVVLES----MARHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~~----~~~~~~~~~n~~~t~~ll~~----~~~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||+.......    +..+..+++|+.++..++++    |.+++ .++||++||.+.+           .+.+
T Consensus        83 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~-----------~~~~  151 (275)
T PRK05876         83 HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGL-----------VPNA  151 (275)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhc-----------cCCC
Confidence            799999999986544333    33445678999986665544    44554 5799999998776           2345


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +.+.|+.||++.+.+++.++.+   .|+++++++||.+.++.
T Consensus       152 ~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~  193 (275)
T PRK05876        152 GLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNL  193 (275)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccccc
Confidence            5789999999999999999877   58999999999998875

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.7e-25  Score=198.65  Aligned_cols=185  Identities=12%  Similarity=0.045  Sum_probs=139.8

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|+|+||||+||||++++++|+++|++|++++|+..+..+..+.+....+ +.++.++.+|++|.+++++++++     
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~~~   93 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATP-GADVTLQELDLTSLASVRAAADALRAAY   93 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC-CCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence            448999999999999999999999999999999875544444444433222 24688999999999999888764     


Q ss_pred             CCCcEEEEcccccCcCC--CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEccccccc--CCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE--STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYG--EPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~--~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g--~~~~~~~~e~~~~~  215 (296)
                      +++|+||||||......  ..+..+..+++|+.+    +..+++.+++.+.++||++||.+.+.  .........+.+..
T Consensus        94 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~  173 (306)
T PRK06197         94 PRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRYN  173 (306)
T ss_pred             CCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccCCC
Confidence            57999999999754322  345567789999999    77788888877778999999987543  21111222223445


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEE--ecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMIL--RYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~l--rpg~v~Gp~  254 (296)
                      +..+|+.||++.+.+++.++.+   .|++++++  +||.|.++.
T Consensus       174 ~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~  217 (306)
T PRK06197        174 RVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL  217 (306)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence            6789999999999999999887   46666554  799998764

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.5e-25  Score=193.92  Aligned_cols=199  Identities=15%  Similarity=0.089  Sum_probs=146.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+|+||||+||||.+++++|+++|++|++++|+....++..   ++.... .++.++.+|++|.+++.+++++     +.
T Consensus         3 ~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~---~~~~~~-~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   78 (257)
T PRK07024          3 LKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFA---ARLPKA-ARVSVYAADVRDADALAAAAADFIAAHGL   78 (257)
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HhcccC-CeeEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            79999999999999999999999999999998653332222   222212 2788999999999999887754     56


Q ss_pred             CcEEEEcccccCcCC-----CCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGE-----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~-----~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      +|+||||||......     ..+..+..+++|+.++..    +++.|++.+.++||++||.+.+           .+.+.
T Consensus        79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~-----------~~~~~  147 (257)
T PRK07024         79 PDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGV-----------RGLPG  147 (257)
T ss_pred             CCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhc-----------CCCCC
Confidence            999999999754322     223456678899999666    5557777777899999997654           22334


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      ...|+.||++.+.++++++.+   +|+++++++||.|.++.....  ....+..-.+..+...+++.+..++.
T Consensus       148 ~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~a~~~~~~l~~~~~  218 (257)
T PRK07024        148 AGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHN--PYPMPFLMDADRFAARAARAIARGRR  218 (257)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcC--CCCCCCccCHHHHHHHHHHHHhCCCc
Confidence            678999999999999999865   699999999999999853211  01111111122677788888887775

>PRK06196 oxidoreductase; Provisional

Probab=99.94  E-value=2.9e-25  Score=199.29  Aligned_cols=179  Identities=13%  Similarity=0.088  Sum_probs=135.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+|+||||+||||++++++|+++|++|++++|+....++..+.   +    .++.++++|++|.+++++++++     +
T Consensus        26 ~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~---l----~~v~~~~~Dl~d~~~v~~~~~~~~~~~~   98 (315)
T PRK06196         26 GKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAG---I----DGVEVVMLDLADLESVRAFAERFLDSGR   98 (315)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---h----hhCeEEEccCCCHHHHHHHHHHHHhcCC
Confidence            38999999999999999999999999999999865433322222   2    2378899999999999888764     6


Q ss_pred             CCcEEEEcccccCcC--CCCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCC-CCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVG--ESTLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEP-EKMPITEETPQAPI  217 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~--~~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~-~~~~~~e~~~~~~~  217 (296)
                      ++|+||||||+....  ...+..+..+++|+.+    ++.+++.+++.+.++||++||.+..... .........+..+.
T Consensus        99 ~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~  178 (315)
T PRK06196         99 RIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKW  178 (315)
T ss_pred             CCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChH
Confidence            799999999975432  2334567788999999    5556677777766799999997653211 11111112334456


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      ..|+.||++.+.+++.++.+   .|+++++++||.|.++..
T Consensus       179 ~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~  219 (315)
T PRK06196        179 LAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQ  219 (315)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCcc
Confidence            78999999999999999875   689999999999999853

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.94  E-value=3.1e-25  Score=192.87  Aligned_cols=172  Identities=15%  Similarity=0.084  Sum_probs=135.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+++||||+||||.+++++|+++|++|++++|+..+.++..+.++..   +.++.++.+|++|.+++++++++     +
T Consensus         6 ~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T PRK07478          6 GKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAE---GGEAVALAGDVRDEAYAKALVALAVERFG   82 (254)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            389999999999999999999999999999998765544444443332   35688899999999999888764     5


Q ss_pred             CCcEEEEcccccCc-CC----CCcChHHHHHHHHHHHH----HHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYV-GE----STLDPLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~-~~----~~~~~~~~~~~n~~~t~----~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||.... ..    ..++....+++|+.++.    .+++.+++.+.++||++||...+.          .+.+
T Consensus        83 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~----------~~~~  152 (254)
T PRK07478         83 GLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHT----------AGFP  152 (254)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhc----------cCCC
Confidence            89999999997532 12    23345667899998744    457777777778999999976652          1233


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.||++.+.+++.++.+   .|+++++|+||.|-.+.
T Consensus       153 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  194 (254)
T PRK07478        153 GMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPM  194 (254)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcc
Confidence            4678999999999999999987   58999999999998773

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.94  E-value=3.2e-25  Score=199.60  Aligned_cols=182  Identities=19%  Similarity=0.192  Sum_probs=134.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+|+||||+||||++++++|+++|++|++++|+..+.++..+.+.   ..+.++.++.+|++|.+++++++++     +
T Consensus         6 ~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~---~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   82 (322)
T PRK07453          6 KGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELG---IPPDSYTIIHIDLGDLDSVRRFVDDFRALGK   82 (322)
T ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh---ccCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            4899999999999999999999999999999986544333333332   1234688999999999999888865     4


Q ss_pred             CCcEEEEcccccCcC-----CCCcChHHHHHHHHHHHHHHHH----HHHHcC--CCEEEEEcccccccCC-C-C--CCC-
Q 022471          145 AFDAVMHFAAVAYVG-----ESTLDPLKYYHNITSNTLVVLE----SMARHG--VDTLIYSSTCATYGEP-E-K--MPI-  208 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~-----~~~~~~~~~~~~n~~~t~~ll~----~~~~~~--~~riV~~SS~~~~g~~-~-~--~~~-  208 (296)
                      ++|+||||||+....     .+.+..+..+++|+.++..+++    .|++.+  .+|||++||..++... . .  .+. 
T Consensus        83 ~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~  162 (322)
T PRK07453         83 PLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAP  162 (322)
T ss_pred             CccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCc
Confidence            699999999975321     2334566789999999766554    444444  2599999997765321 0 0  000 


Q ss_pred             -------------------CCCCCCCCCChHHHHHHHHHHHHHHhhhc----CCCcEEEEecCeeecCC
Q 022471          209 -------------------TEETPQAPINPYGKAKKMAEDIILDFSKN----SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       209 -------------------~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~gi~~~~lrpg~v~Gp~  254 (296)
                                         .+..+..+..+|+.||++.+.+++.++++    .|+++++++||+|++..
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~  231 (322)
T PRK07453        163 ADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTP  231 (322)
T ss_pred             cchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCc
Confidence                               01123456789999999999999999876    38999999999998754

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.93  E-value=3.7e-25  Score=195.05  Aligned_cols=165  Identities=18%  Similarity=0.192  Sum_probs=133.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc------
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------  143 (296)
                      +|+|+||||+||||++++++|+++|++|++++|+.....    .+..     ..++++.+|++|.+++++++++      
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~----~l~~-----~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   74 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVA----ALEA-----EGLEAFQLDYAEPESIAALVAQVLELSG   74 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH----HHHH-----CCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            378999999999999999999999999999998643322    1221     2477889999999998887764      


Q ss_pred             CCCcEEEEcccccCcCCCC----cChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGEST----LDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~~~----~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +++|+||||||........    +.....+++|+.|    ++.+++.|++.+.++||++||...+           .+.+
T Consensus        75 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~-----------~~~~  143 (277)
T PRK05993         75 GRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGL-----------VPMK  143 (277)
T ss_pred             CCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhc-----------CCCC
Confidence            4799999999986554332    2335578899998    7778888988888899999997665           2344


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +.+.|+.||++.+.+++.++.|   +|+++++|+||.|..+.
T Consensus       144 ~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~  185 (277)
T PRK05993        144 YRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRF  185 (277)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCch
Confidence            5789999999999999999866   79999999999998764

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.93  E-value=3.3e-25  Score=193.35  Aligned_cols=173  Identities=17%  Similarity=0.141  Sum_probs=134.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+++||||+||||++++++|+++|++|++++|+....++..+.+.... .+.++.++++|++|.+++++++++     +
T Consensus         7 ~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   85 (260)
T PRK07063          7 GKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDV-AGARVLAVPADVTDAASVAAAVAAAEEAFG   85 (260)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcc-CCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            3899999999999999999999999999999986654444444443211 235688999999999999888765     6


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||......    ..++.+..+++|+.++..    +++.|++.+.++||++||...+           .+.++
T Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~~~  154 (260)
T PRK07063         86 PLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAF-----------KIIPG  154 (260)
T ss_pred             CCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhc-----------cCCCC
Confidence            8999999999754322    233455678889988655    4455555666799999997654           22344


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..+|+.||++.+.+++.++.+   .||++++|+||.|-.+.
T Consensus       155 ~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~  195 (260)
T PRK07063        155 CFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQL  195 (260)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChh
Confidence            678999999999999999987   58999999999997764

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.93  E-value=3.2e-25  Score=196.60  Aligned_cols=184  Identities=17%  Similarity=0.118  Sum_probs=147.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      ++++|||||+|||.++|++|+++|++|++.+|+....+++.+.+.+... ..++.++++|++|.++++++.++     ..
T Consensus        36 ~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~-~~~i~~~~lDLssl~SV~~fa~~~~~~~~~  114 (314)
T KOG1208|consen   36 KVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKA-NQKIRVIQLDLSSLKSVRKFAEEFKKKEGP  114 (314)
T ss_pred             cEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCC-CCceEEEECCCCCHHHHHHHHHHHHhcCCC
Confidence            8999999999999999999999999999999988777777777766332 36788899999999999998876     78


Q ss_pred             CcEEEEcccccCcCC--CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCC--CCCC
Q 022471          146 FDAVMHFAAVAYVGE--STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP--QAPI  217 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~--~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~--~~~~  217 (296)
                      +|++|||||++..+.  +.+..+..+.+|+.|    +..+++.++.+...|||++||..+........+..+..  ....
T Consensus       115 ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~~~~~~~~  194 (314)
T KOG1208|consen  115 LDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEKAKLYSSD  194 (314)
T ss_pred             ccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchhccCccch
Confidence            999999999977654  556788899999999    66677888877768999999987611111111111111  2334


Q ss_pred             ChHHHHHHHHHHHHHHhhhc--CCCcEEEEecCeeecCCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN--SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~--~gi~~~~lrpg~v~Gp~~  255 (296)
                      ..|+.||.+...++.+++++  .|+.++.++||.|.++.-
T Consensus       195 ~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l  234 (314)
T KOG1208|consen  195 AAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGL  234 (314)
T ss_pred             hHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccce
Confidence            46999999999999999987  379999999999999853

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.93  E-value=5.2e-25  Score=192.05  Aligned_cols=168  Identities=21%  Similarity=0.161  Sum_probs=130.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+++||||+||||++++++|+++|++|++++|+.. ..+..+.+.   ..+.++.++.+|++|.+++.+++++     +
T Consensus         8 ~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (260)
T PRK12823          8 GKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELR---AAGGEALALTADLETYAGAQAAMAAAVEAFG   83 (260)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHH---hcCCeEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999998632 222222222   2235678899999999988887765     5


Q ss_pred             CCcEEEEcccccC-cCC----CCcChHHHHHHHHHHHH----HHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAY-VGE----STLDPLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~-~~~----~~~~~~~~~~~n~~~t~----~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||... ..+    ..++....+++|+.++.    .+++.|++.+.++||++||...++.             
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-------------  150 (260)
T PRK12823         84 RIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI-------------  150 (260)
T ss_pred             CCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC-------------
Confidence            7999999998542 111    33344556788888754    5677777777789999999876521             


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +..+|+.||++.+.+++.++.+   +|+++++|+||+|++|.
T Consensus       151 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  192 (260)
T PRK12823        151 NRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPP  192 (260)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcc
Confidence            2457999999999999999987   49999999999999984

>PRK08589 short chain dehydrogenase; Validated

Probab=99.93  E-value=4.3e-25  Score=194.17  Aligned_cols=169  Identities=18%  Similarity=0.170  Sum_probs=131.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||++|||++++++|+++|++|++++|+ ...++..+.+++   .+.++.++.+|++|.+++++++++     +
T Consensus         6 ~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (272)
T PRK08589          6 NKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKS---NGGKAKAYHVDISDEQQVKDFASEIKEQFG   81 (272)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHh---cCCeEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999986 333333333322   235688999999999999887765     6


Q ss_pred             CCcEEEEcccccCc-CCC----CcChHHHHHHHHHHH----HHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYV-GES----TLDPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~-~~~----~~~~~~~~~~n~~~t----~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||.... ...    .+..+..+++|+.++    +.+++.+++.+ ++||++||...+.           +.+
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~-----------~~~  149 (272)
T PRK08589         82 RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQA-----------ADL  149 (272)
T ss_pred             CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcC-----------CCC
Confidence            79999999997532 222    223345677888885    45666676665 7999999977652           233


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ....|+.||++.+.+++.++.+   .||++++|+||.|..+.
T Consensus       150 ~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  191 (272)
T PRK08589        150 YRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPL  191 (272)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCch
Confidence            4678999999999999999987   68999999999998874

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.93  E-value=7.1e-25  Score=191.16  Aligned_cols=171  Identities=20%  Similarity=0.149  Sum_probs=137.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+|+||++++++|+++|++|++++|++...++..+.++..   +.++.++++|++|.+++++++++     +
T Consensus         7 ~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   83 (262)
T PRK13394          7 GKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA---GGKAIGVAMDVTNEDAVNAGIDKVAERFG   83 (262)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc---CceEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999998765554444444332   35688899999999999888764     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHH----HHHHHHHH-HHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSN----TLVVLESM-ARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~----t~~ll~~~-~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||......    ..+..+..+++|+.+    +..+++.+ ++.+.++||++||...+           .+.+
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~-----------~~~~  152 (262)
T PRK13394         84 SVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSH-----------EASP  152 (262)
T ss_pred             CCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhc-----------CCCC
Confidence            6999999999864433    223345567799999    77788888 66677899999996544           1233


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +.+.|+.+|.+.+.+++.++.+   .++++++++||.+++|.
T Consensus       153 ~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~  194 (262)
T PRK13394        153 LKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPL  194 (262)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchh
Confidence            4678999999999999999877   68999999999999986

>PRK06128 oxidoreductase; Provisional

Probab=99.93  E-value=8e-25  Score=195.15  Aligned_cols=171  Identities=14%  Similarity=0.150  Sum_probs=135.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC--cchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG--NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (296)
                      +|+||||||+||||++++++|+++|++|++.+++...  .++..+.++.   .+.++.++.+|++|.+++++++++    
T Consensus        55 ~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  131 (300)
T PRK06128         55 GRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQA---EGRKAVALPGDLKDEAFCRQLVERAVKE  131 (300)
T ss_pred             CCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHH---cCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            3899999999999999999999999999988764322  1222222222   245688899999999999888765    


Q ss_pred             -CCCcEEEEcccccCcC-----CCCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 -NAFDAVMHFAAVAYVG-----ESTLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 -~~~D~vi~~Ag~~~~~-----~~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                       +++|+||||||.....     ...+..+..+++|+.++..+++++.+.  ..++||++||...|.           +..
T Consensus       132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~  200 (300)
T PRK06128        132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQ-----------PSP  200 (300)
T ss_pred             hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccC-----------CCC
Confidence             5899999999974321     134456678999999998888888653  236999999988773           233


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ....|+.||.+.+.+++.++.+   .|+++++|+||.|.+|.
T Consensus       201 ~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~  242 (300)
T PRK06128        201 TLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPL  242 (300)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCC
Confidence            4678999999999999999987   69999999999999986

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.93  E-value=6.6e-25  Score=191.02  Aligned_cols=172  Identities=12%  Similarity=0.051  Sum_probs=135.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+|+||||+||||++++++|+++|++|++++|++.+.++..+.++.   .+.++.++.+|++|.+++++++++     +
T Consensus         5 ~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (258)
T PRK07890          5 GKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDD---LGRRALAVPTDITDEDQCANLVALALERFG   81 (258)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHH---hCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999999866443333333322   235688999999999999887765     6


Q ss_pred             CCcEEEEcccccCc-C----CCCcChHHHHHHHHHHHHHHHHHHHHc---CCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYV-G----ESTLDPLKYYHNITSNTLVVLESMARH---GVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~-~----~~~~~~~~~~~~n~~~t~~ll~~~~~~---~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||.... .    ...+.....+++|+.++..+++++.+.   ..++||++||...+           .+.++
T Consensus        82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~-----------~~~~~  150 (258)
T PRK07890         82 RVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLR-----------HSQPK  150 (258)
T ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhc-----------cCCCC
Confidence            79999999997432 1    233445667889999988877776542   23699999997664           23445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      ...|+.+|.+.+.+++.++.+   .++++++++||.+++|..
T Consensus       151 ~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~  192 (258)
T PRK07890        151 YGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPL  192 (258)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHH
Confidence            778999999999999999976   589999999999999863

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1e-24  Score=192.28  Aligned_cols=168  Identities=15%  Similarity=0.110  Sum_probs=132.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+++||||+||||++++++|+++|++|++++|+..+..    .+...  .+.++.++.+|++|.+++.+++++     +
T Consensus         4 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~----~l~~~--~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   77 (277)
T PRK06180          4 MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARA----DFEAL--HPDRALARLLDVTDFDAIDAVVADAEATFG   77 (277)
T ss_pred             CCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHH----HHHhh--cCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Confidence            378999999999999999999999999999998653322    12111  124678889999999999888764     5


Q ss_pred             CCcEEEEcccccCcCCCCc----ChHHHHHHHHHHHHHHHHH----HHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLVVLES----MARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~~~----~~~~~~~~n~~~t~~ll~~----~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||........+    ...+.+++|+.++.+++++    +++.+.++||++||.+.+.           +.++
T Consensus        78 ~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~-----------~~~~  146 (277)
T PRK06180         78 PIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLI-----------TMPG  146 (277)
T ss_pred             CCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccC-----------CCCC
Confidence            7999999999865443332    2345688999998887766    4455667999999976652           2345


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      .++|+.+|++++.+++.++.+   +|+++++++||.++++.
T Consensus       147 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~  187 (277)
T PRK06180        147 IGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDW  187 (277)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCc
Confidence            789999999999999999876   69999999999998864

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.93  E-value=1.3e-24  Score=189.11  Aligned_cols=171  Identities=15%  Similarity=0.116  Sum_probs=135.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+|+||++++++|+++|++|++++|+..+..+..+.++.   .+.++.++.+|++|.+++++++++     +
T Consensus        10 ~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (255)
T PRK07523         10 GRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKG---QGLSAHALAFDVTDHDAVRAAIDAFEAEIG   86 (255)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh---cCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            38999999999999999999999999999999865444333333332   235688899999999999988865     5


Q ss_pred             CCcEEEEcccccCcCCCCc----ChHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLVVLESMA----RHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~~~----~~~~~~~~n~~~t~~ll~~~~----~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||.....+..+    ..++.+++|+.++..+++++.    +.+.++||++||...+           .+.++
T Consensus        87 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-----------~~~~~  155 (255)
T PRK07523         87 PIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSA-----------LARPG  155 (255)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhc-----------cCCCC
Confidence            7999999999865443332    335567799999777666554    4466899999996553           23445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      .+.|+.+|.+.+.+++.++.+   +|+++++++||.+.++.
T Consensus       156 ~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~  196 (255)
T PRK07523        156 IAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPL  196 (255)
T ss_pred             CccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCch
Confidence            788999999999999999875   79999999999999985

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.3e-24  Score=190.12  Aligned_cols=173  Identities=17%  Similarity=0.126  Sum_probs=135.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+++||||+||||++++++|+++|++|++++|+..+.++..+.+.+..+ +.++.++.+|++|.+++++++++     +
T Consensus         8 ~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T PRK07062          8 GRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFP-GARLLAARCDVLDEADVAAFAAAVEARFG   86 (265)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCC-CceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            38999999999999999999999999999999876555544444443322 24678899999999999887764     6


Q ss_pred             CCcEEEEcccccCcCCC----CcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGES----TLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~----~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||.......    .+...+.+++|+.+    ++.+++.+++.+.++||++||...+.           +.+.
T Consensus        87 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  155 (265)
T PRK07062         87 GVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQ-----------PEPH  155 (265)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccC-----------CCCC
Confidence            79999999997543332    22344567778777    55567777777678999999977652           2334


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.+|++.+.+++.++.|   .|+++++++||.|..+.
T Consensus       156 ~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~  196 (265)
T PRK07062        156 MVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQ  196 (265)
T ss_pred             chHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccch
Confidence            678999999999999999887   68999999999998764

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.4e-24  Score=195.78  Aligned_cols=172  Identities=13%  Similarity=0.099  Sum_probs=136.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+|+||||+||||++++++|+++|++|++++|+....++..+.+++   .+.++.++.+|++|.+++++++++     +
T Consensus         7 ~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~---~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (330)
T PRK06139          7 GAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRA---LGAEVLVVPTDVTDADQVKALATQAASFGG   83 (330)
T ss_pred             CCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh---cCCcEEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            38999999999999999999999999999999876554444444433   245688899999999999988764     6


Q ss_pred             CCcEEEEcccccCcCCCC----cChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~~----~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|++|||||+.......    +..++.+++|+.++..    +++.|++++.++||++||...+.           +.+.
T Consensus        84 ~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~-----------~~p~  152 (330)
T PRK06139         84 RIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFA-----------AQPY  152 (330)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcC-----------CCCC
Confidence            799999999986554433    3334578899998555    66667777778999999977652           3334


Q ss_pred             CChHHHHHHHHHHHHHHhhhc----CCCcEEEEecCeeecCCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN----SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~----~gi~~~~lrpg~v~Gp~~  255 (296)
                      ...|+.||++...++++++.|    .|++++.+.||.|.+|..
T Consensus       153 ~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~  195 (330)
T PRK06139        153 AAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGF  195 (330)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccc
Confidence            678999999999999999877    389999999999999853

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.93  E-value=3.7e-24  Score=190.21  Aligned_cols=203  Identities=16%  Similarity=0.100  Sum_probs=145.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+++||||+||||++++++|+++|++|++++|+....++..+.+...   +.++.++.+|++|.+++.++++.     +
T Consensus        40 ~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~---~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  116 (293)
T PRK05866         40 GKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRA---GGDAMAVPCDLSDLDAVDALVADVEKRIG  116 (293)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999998754433333333322   34678899999999999888863     5


Q ss_pred             CCcEEEEcccccCcCCCC------cChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGEST------LDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~~------~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                      ++|+||||||........      +.....+++|+.++..    +++.|++.+.++||++||.+++..          +.
T Consensus       117 ~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------~~  186 (293)
T PRK05866        117 GVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSE----------AS  186 (293)
T ss_pred             CCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC----------CC
Confidence            899999999986543322      2334578899998555    555666777789999999766521          12


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      +....|++||++.+.+++.++.|   +|+++++++||.|-++...........+. -.+..+...+++++..++.
T Consensus       187 p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~~~~~~~-~~pe~vA~~~~~~~~~~~~  260 (293)
T PRK05866        187 PLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKAYDGLPA-LTADEAAEWMVTAARTRPV  260 (293)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccccccCCCC-CCHHHHHHHHHHHHhcCCe
Confidence            33678999999999999999877   58999999999987764321100001110 1112566677777776553

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.93  E-value=5.3e-24  Score=185.33  Aligned_cols=200  Identities=18%  Similarity=0.140  Sum_probs=146.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCC-cchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----C
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRG-NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----N  144 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~  144 (296)
                      ++|+||||+||||++++++|+++| ++|++++|++.. .++..+.++...  ..+++++.+|++|.+++++++++    +
T Consensus         9 ~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~~g   86 (253)
T PRK07904          9 QTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAG--ASSVEVIDFDALDTDSHPKVIDAAFAGG   86 (253)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcC--CCceEEEEecCCChHHHHHHHHHHHhcC
Confidence            789999999999999999999995 899999987654 444444444321  23688999999999987766543    5


Q ss_pred             CCcEEEEcccccCcCC-CCcCh---HHHHHHHHHHHH----HHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE-STLDP---LKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~-~~~~~---~~~~~~n~~~t~----~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|++|||+|...... ..++.   .+.+++|+.++.    .+++.|++++.++||++||...+.           +.++
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~-----------~~~~  155 (253)
T PRK07904         87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGER-----------VRRS  155 (253)
T ss_pred             CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcC-----------CCCC
Confidence            8999999999854321 11122   246889998855    478888888888999999976541           2234


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      ...|+.||++...+++.++.+   +|+++++++||.+..+..... ...  +..-....+...+++.+.+++.
T Consensus       156 ~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~-~~~--~~~~~~~~~A~~i~~~~~~~~~  225 (253)
T PRK07904        156 NFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHA-KEA--PLTVDKEDVAKLAVTAVAKGKE  225 (253)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccC-CCC--CCCCCHHHHHHHHHHHHHcCCC
Confidence            567999999999999998766   799999999999998743211 111  1111223678888888877766

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.93  E-value=9.2e-25  Score=189.83  Aligned_cols=169  Identities=14%  Similarity=0.165  Sum_probs=131.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+++||||++|||++++++|+++|++|++++|+.  .++..+.++..   +.++.++.+|++|.+++++++++     +
T Consensus         8 ~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~--~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   82 (251)
T PRK12481          8 GKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAE--APETQAQVEAL---GRKFHFITADLIQQKDIDSIVSQAVEVMG   82 (251)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCch--HHHHHHHHHHc---CCeEEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999988643  22233333322   35688899999999999988865     6


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHH----HHHHHHHcC-CCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLV----VLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|++|||||......    ..++++..+++|+.++..    +++.|++.+ .++||++||...+.           +..
T Consensus        83 ~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~-----------~~~  151 (251)
T PRK12481         83 HIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQ-----------GGI  151 (251)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcC-----------CCC
Confidence            8999999999865433    234455678899988555    455555554 47999999987762           223


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ....|+.||++.+.+++.++.|   +|+++++|+||.|-.+.
T Consensus       152 ~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~  193 (251)
T PRK12481        152 RVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDN  193 (251)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCc
Confidence            3568999999999999999987   79999999999997764

>PRK06182 short chain dehydrogenase; Validated

Probab=99.93  E-value=9.5e-25  Score=191.94  Aligned_cols=165  Identities=16%  Similarity=0.078  Sum_probs=131.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+++||||+||||++++++|+++|++|++++|+..+..    .+..     .++.++.+|++|.+++++++++     +
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~----~~~~-----~~~~~~~~Dv~~~~~~~~~~~~~~~~~~   73 (273)
T PRK06182          3 KKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKME----DLAS-----LGVHPLSLDVTDEASIKAAVDTIIAEEG   73 (273)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHh-----CCCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            389999999999999999999999999999987643221    1111     2478899999999999888764     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||......    ..++.+..+++|+.+    ++.+++.|++.+.++||++||...+.           +.+.
T Consensus        74 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~-----------~~~~  142 (273)
T PRK06182         74 RIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKI-----------YTPL  142 (273)
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcC-----------CCCC
Confidence            8999999999865433    334456678899988    56677888888878999999966431           2223


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.||++.+.+++.++.+   +|+++++++||.+.++.
T Consensus       143 ~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~  183 (273)
T PRK06182        143 GAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEW  183 (273)
T ss_pred             ccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCccccc
Confidence            567999999999999988865   69999999999999875

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.93  E-value=1.4e-24  Score=191.26  Aligned_cols=171  Identities=17%  Similarity=0.166  Sum_probs=135.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+++||||+||||++++++|+++|++|++++|+....++..+.++.   .+.++.++++|++|.+++.+++++     +
T Consensus        10 ~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (278)
T PRK08277         10 GKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKA---AGGEALAVKADVLDKESLEQARQQILEDFG   86 (278)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999999865443333333322   235688999999999999887764     6


Q ss_pred             CCcEEEEcccccCcCC-------------------CCcChHHHHHHHHHHHH----HHHHHHHHcCCCEEEEEccccccc
Q 022471          145 AFDAVMHFAAVAYVGE-------------------STLDPLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYG  201 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~-------------------~~~~~~~~~~~n~~~t~----~ll~~~~~~~~~riV~~SS~~~~g  201 (296)
                      ++|+||||||......                   ..++....+++|+.++.    .+++.|++.+.++||++||...+ 
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~-  165 (278)
T PRK08277         87 PCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAF-  165 (278)
T ss_pred             CCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhc-
Confidence            8999999999643221                   12334567888999865    45666776667899999998776 


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          202 EPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       202 ~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                                .+.++...|+.||++.+.+++.++.+   .|+++++|+||.|.++.
T Consensus       166 ----------~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~  211 (278)
T PRK08277        166 ----------TPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQ  211 (278)
T ss_pred             ----------CCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcc
Confidence                      23445778999999999999999988   58999999999999885

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.2e-24  Score=188.17  Aligned_cols=162  Identities=19%  Similarity=0.169  Sum_probs=129.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+||||||+||||++++++|+++|++|++++|+....            ...++.++++|++|.+++++++++     ++
T Consensus        10 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~------------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (260)
T PRK06523         10 KRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD------------LPEGVEFVAADLTTAEGCAAVARAVLERLGG   77 (260)
T ss_pred             CEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh------------cCCceeEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            8999999999999999999999999999999864321            024578899999999998877654     67


Q ss_pred             CcEEEEcccccCcC------CCCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVG------ESTLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~------~~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +|+||||||.....      ...+..+..+++|+.++..    +++.+++.+.++||++||...+..          ...
T Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~----------~~~  147 (260)
T PRK06523         78 VDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLP----------LPE  147 (260)
T ss_pred             CCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCC----------CCC
Confidence            99999999964311      2334556678899999655    466666666779999999766521          122


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +..+|+.+|++++.+++.++.+   .|+++++++||.|.+|.
T Consensus       148 ~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~  189 (260)
T PRK06523        148 STTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEA  189 (260)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCcc
Confidence            4678999999999999999877   68999999999999885

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.7e-24  Score=190.50  Aligned_cols=167  Identities=17%  Similarity=0.174  Sum_probs=131.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |++|||||+||||++++++|+++|++|++++|+.....    .+.+..  +.++.++++|++|.+++++++++     ++
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~----~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALD----DLKARY--GDRLWVLQLDVTDSAAVRAVVDRAFAALGR   76 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHHhc--cCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            78999999999999999999999999999987543222    222211  24688999999999999887754     57


Q ss_pred             CcEEEEcccccCcCCCC----cChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~~~----~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +|+||||||........    +.....+++|+.++.++++++    ++.+.++||++||....           .+.++.
T Consensus        77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-----------~~~~~~  145 (276)
T PRK06482         77 IDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQ-----------IAYPGF  145 (276)
T ss_pred             CCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccc-----------cCCCCC
Confidence            99999999986554332    334567889999988888775    56667899999996643           223457


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCee---ecCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNV---IGSD  254 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v---~Gp~  254 (296)
                      +.|+.||++.+.+++.++.+   +|++++++|||.+   ||++
T Consensus       146 ~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~  188 (276)
T PRK06482        146 SLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAG  188 (276)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCccc
Confidence            89999999999999999876   6999999999998   5543

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.93  E-value=5e-24  Score=190.72  Aligned_cols=191  Identities=25%  Similarity=0.362  Sum_probs=143.0

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc--CCCcEE
Q 022471           73 VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--NAFDAV  149 (296)
Q Consensus        73 vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~--~~~D~v  149 (296)
                      ||||||||+||+++++.|+++|+ +|++++|..... .    +...     ....+..|+.+.+.++.+.+.  .++|+|
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~----~~~~-----~~~~~~~d~~~~~~~~~~~~~~~~~~D~v   70 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-K----FLNL-----ADLVIADYIDKEDFLDRLEKGAFGKIEAI   70 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-h----hhhh-----hheeeeccCcchhHHHHHHhhccCCCCEE
Confidence            69999999999999999999998 788887643321 1    1111     113467888888887776642  579999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCC-CCCCChHHHHHHHHH
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP-QAPINPYGKAKKMAE  228 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~-~~~~~~Y~~sK~~~e  228 (296)
                      ||+|+....  ...++...+++|+.++.++++++++.+. ++|++||.++|+.... +++|+++ ..|.++|+.||.++|
T Consensus        71 vh~A~~~~~--~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~~-~~~e~~~~~~p~~~Y~~sK~~~e  146 (314)
T TIGR02197        71 FHQGACSDT--TETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGEA-GFREGRELERPLNVYGYSKFLFD  146 (314)
T ss_pred             EECccccCc--cccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCCC-CcccccCcCCCCCHHHHHHHHHH
Confidence            999997542  3446677899999999999999998876 8999999999986543 4555554 347889999999999


Q ss_pred             HHHHHhhh--cCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          229 DIILDFSK--NSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       229 ~~~~~~~~--~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      .+++.+..  ..+++++++||+.||||+....  .       ....++..++..+..+++
T Consensus       147 ~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~--~-------~~~~~~~~~~~~~~~~~~  197 (314)
T TIGR02197       147 QYVRRRVLPEALSAQVVGLRYFNVYGPREYHK--G-------KMASVAFHLFNQIKAGGN  197 (314)
T ss_pred             HHHHHHhHhhccCCceEEEEEeeccCCCCCCC--C-------CcccHHHHHHHHHhcCCC
Confidence            99987543  2467999999999999985321  0       011566677777766665

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.93  E-value=1.6e-24  Score=194.62  Aligned_cols=201  Identities=14%  Similarity=0.100  Sum_probs=141.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC--HHHHHHHhhc---C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD--AKAVNKFFSE---N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~---~  144 (296)
                      +++++|||||||||+++|++|+++|++|++++|+..+.++..++++...+ ..++..+.+|+++  .+.++++.+.   .
T Consensus        53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~  131 (320)
T PLN02780         53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYS-KTQIKTVVVDFSGDIDEGVKRIKETIEGL  131 (320)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCC-CcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence            38999999999999999999999999999999877655555555544322 2467788999985  3444444332   3


Q ss_pred             CCcEEEEcccccCc--CC----CCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYV--GE----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~--~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                      ++|++|||||+...  ..    ..++.+..+++|+.++..    +++.|.+++.++||++||.+.+...         +.
T Consensus       132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~---------~~  202 (320)
T PLN02780        132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIP---------SD  202 (320)
T ss_pred             CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC---------CC
Confidence            57799999998542  11    223345578899998544    6666777777899999997764210         11


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARG  283 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  283 (296)
                      +..+.|++||++.+.+++.++.|   .|+++++++||.|-.+.....-.....+   .+..+...+++.+..
T Consensus       203 p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~~~~~~~~---~p~~~A~~~~~~~~~  271 (320)
T PLN02780        203 PLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIRRSSFLVP---SSDGYARAALRWVGY  271 (320)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccccCCCCCCC---CHHHHHHHHHHHhCC
Confidence            33689999999999999999987   5899999999999887532110000011   112566777777743

>PRK07985 oxidoreductase; Provisional

Probab=99.93  E-value=2.8e-24  Score=191.10  Aligned_cols=170  Identities=18%  Similarity=0.165  Sum_probs=132.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC--cchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG--NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      |++|||||+||||++++++|+++|++|++.+|+...  .+++.+.+++   .+.++.++.+|++|.+++.+++++     
T Consensus        50 k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  126 (294)
T PRK07985         50 RKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEE---CGRKAVLLPGDLSDEKFARSLVHEAHKAL  126 (294)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHH---cCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            899999999999999999999999999988764321  1222222221   235678899999999998887765     


Q ss_pred             CCCcEEEEcccccCc-----CCCCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYV-----GESTLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~-----~~~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      +++|++|||||....     ....++..+.+++|+.++..+++++.+.  ..++||++||...+.           +.+.
T Consensus       127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~-----------~~~~  195 (294)
T PRK07985        127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQ-----------PSPH  195 (294)
T ss_pred             CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhcc-----------CCCC
Confidence            679999999996421     1234456678899999988877776542  236999999987763           2334


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..+|+.||++.+.+++.++.+   +|+++++|+||+|++|.
T Consensus       196 ~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~  236 (294)
T PRK07985        196 LLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL  236 (294)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCcccc
Confidence            678999999999999999987   69999999999999985

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.93  E-value=3.5e-24  Score=188.28  Aligned_cols=198  Identities=18%  Similarity=0.091  Sum_probs=143.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +++++|||||||||++++++|+++|++|++.+|+.....+..+   ..    .++.++.+|++|.+++++++++     +
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~---~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAA---EL----GLVVGGPLDVTDPASFAAFLDAVEADLG   77 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---Hh----ccceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999875433222222   11    2477889999999998877754     6


Q ss_pred             CCcEEEEcccccCcCCCC----cChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~~----~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|++|||||+.......    +...+.+++|+.++..    +++.|++.+.++||++||.+.+           .+.++
T Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~~~  146 (273)
T PRK07825         78 PIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGK-----------IPVPG  146 (273)
T ss_pred             CCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCcccc-----------CCCCC
Confidence            799999999986544322    2344577899988555    6666777788899999997765           23345


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      ...|+.||++.+.+++.++.+   .|+++++++||.+.++......+....+ .-....+...++..+..++.
T Consensus       147 ~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~va~~~~~~l~~~~~  218 (273)
T PRK07825        147 MATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGGAKGFK-NVEPEDVAAAIVGTVAKPRP  218 (273)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhcccccccCCC-CCCHHHHHHHHHHHHhCCCC
Confidence            788999999999999998877   6999999999999776422211111101 11112556667777766554

>PRK05717 oxidoreductase; Validated

Probab=99.93  E-value=2.2e-24  Score=187.66  Aligned_cols=169  Identities=18%  Similarity=0.143  Sum_probs=131.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+++||||+|+||++++++|+++|++|++++|+..+..+   ..++.   +.++.++++|++|.+++++++++     +
T Consensus        10 ~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~---~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   83 (255)
T PRK05717         10 GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSK---VAKAL---GENAWFIAMDVADEAQVAAGVAEVLGQFG   83 (255)
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHH---HHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4899999999999999999999999999999875433222   22222   24678899999999998776654     5


Q ss_pred             CCcEEEEcccccCcC--C----CCcChHHHHHHHHHHHHHHHHHHHH---cCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVG--E----STLDPLKYYHNITSNTLVVLESMAR---HGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~--~----~~~~~~~~~~~n~~~t~~ll~~~~~---~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||.....  .    ..+++...+++|+.++..+++++.+   ...++||++||...+.           +.+
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~-----------~~~  152 (255)
T PRK05717         84 RLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQ-----------SEP  152 (255)
T ss_pred             CCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcC-----------CCC
Confidence            799999999975431  1    2334557889999999998888753   2246899999976542           223


Q ss_pred             CCChHHHHHHHHHHHHHHhhhcC--CCcEEEEecCeeecCCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKNS--DMAVMILRYFNVIGSDP  255 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~~--gi~~~~lrpg~v~Gp~~  255 (296)
                      ..++|+.+|++++.+++.++.+.  ++++++++||.+.++..
T Consensus       153 ~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~  194 (255)
T PRK05717        153 DTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDP  194 (255)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCcc
Confidence            45789999999999999999883  59999999999999753

>PRK09186 flagellin modification protein A; Provisional

Probab=99.93  E-value=2e-24  Score=187.77  Aligned_cols=183  Identities=18%  Similarity=0.162  Sum_probs=133.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+|+||||+||||+++++.|+++|++|++++|+....++..+.+..... ...+.++.+|++|.+++.+++++     +
T Consensus         4 ~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   82 (256)
T PRK09186          4 GKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFK-SKKLSLVELDITDQESLEEFLSKSAEKYG   82 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcC-CCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999998876554444444332221 13566789999999999888865     5


Q ss_pred             CCcEEEEcccccCc---C----CCCcChHHHHHHHHHHH----HHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYV---G----ESTLDPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~---~----~~~~~~~~~~~~n~~~t----~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~  213 (296)
                      ++|+|||||+....   .    ...+.....+++|+.++    +.+++.|++.+.++||++||.+.+..... ...++.+
T Consensus        83 ~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-~~~~~~~  161 (256)
T PRK09186         83 KIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKF-EIYEGTS  161 (256)
T ss_pred             CccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccc-hhccccc
Confidence            69999999975321   1    12233445677788774    55677777777789999999766533221 1122233


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       214 ~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ......|+.||.+.+.+++.++.+   .++++++++||.++++.
T Consensus       162 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~  205 (256)
T PRK09186        162 MTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQ  205 (256)
T ss_pred             cCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCC
Confidence            333457999999999999999887   68999999999988754

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.93  E-value=3.6e-24  Score=184.81  Aligned_cols=197  Identities=13%  Similarity=0.063  Sum_probs=144.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc--CCCc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--NAFD  147 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~--~~~D  147 (296)
                      |++++||||+||||++++++|+++|++|++++|++...    +.+.+.   ..++.++.+|++|.+++++++++  ..+|
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~----~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~d   73 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVL----DELHTQ---SANIFTLAFDVTDHPGTKAALSQLPFIPE   73 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHH----HHHHHh---cCCCeEEEeeCCCHHHHHHHHHhcccCCC
Confidence            47899999999999999999999999999999864322    222221   24678899999999999999876  4589


Q ss_pred             EEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCCCCCCCChHH
Q 022471          148 AVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYG  221 (296)
Q Consensus       148 ~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~  221 (296)
                      ++|||||......    ..+..++.+++|+.++.++++++.+.  ..+++|++||....           .+.+....|+
T Consensus        74 ~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~-----------~~~~~~~~Y~  142 (240)
T PRK06101         74 LWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASE-----------LALPRAEAYG  142 (240)
T ss_pred             EEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhc-----------cCCCCCchhh
Confidence            9999998643211    22334567999999999988887753  34689999986543           2233467899


Q ss_pred             HHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          222 KAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       222 ~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      .||++++.+++.++.|   +|+++++++||.|++|.....-  ...+..-........+++.+..+++
T Consensus       143 asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~--~~~~~~~~~~~~a~~i~~~i~~~~~  208 (240)
T PRK06101        143 ASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNT--FAMPMIITVEQASQEIRAQLARGKS  208 (240)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCC--CCCCcccCHHHHHHHHHHHHhcCCC
Confidence            9999999999999865   7999999999999998633210  0111111122567778888887776

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.93  E-value=1.5e-24  Score=188.57  Aligned_cols=171  Identities=22%  Similarity=0.135  Sum_probs=137.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+++||||+|+||++++++|+++|++|++++|+..+.+...+.++.   .+.++.++.+|++|.+++++++++     ++
T Consensus         5 ~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          5 KVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQK---AGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh---cCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            8999999999999999999999999999999876555444444433   235788999999999999888764     57


Q ss_pred             CcEEEEcccccCcCCCC----cChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGEST----LDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~~~----~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +|+||||||........    +..+..+++|+.+    +..+++.+++.+.++||++||...+.           +..+.
T Consensus        82 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~-----------~~~~~  150 (258)
T PRK12429         82 VDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLV-----------GSAGK  150 (258)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhcc-----------CCCCc
Confidence            99999999976544322    2334467788888    66677777777888999999976552           23457


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      +.|+.+|.+.+.+++.++.+   .++++++++||.+++|..
T Consensus       151 ~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~  191 (258)
T PRK12429        151 AAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLV  191 (258)
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhh
Confidence            89999999999999999876   689999999999999864

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.1e-24  Score=195.14  Aligned_cols=171  Identities=18%  Similarity=0.183  Sum_probs=135.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+|+||||+||||++++++|+++|++|++++|+....++..+.++.   .+.++.++.+|++|.++++++++.     +
T Consensus         8 ~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~---~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g   84 (334)
T PRK07109          8 RQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRA---AGGEALAVVADVADAEAVQAAADRAEEELG   84 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH---cCCcEEEEEecCCCHHHHHHHHHHHHHHCC
Confidence            38999999999999999999999999999999865544444444432   245788999999999999988764     6


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|++|||||......    ..+..+..+++|+.+    ++.+++.|++.+.++||++||...+.           +.+.
T Consensus        85 ~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~-----------~~~~  153 (334)
T PRK07109         85 PIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYR-----------SIPL  153 (334)
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhcc-----------CCCc
Confidence            8999999999754333    233345567788777    55577888887778999999988763           2334


Q ss_pred             CChHHHHHHHHHHHHHHhhhc-----CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN-----SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~-----~gi~~~~lrpg~v~Gp~  254 (296)
                      .+.|+.||++.+.++++++.|     .++++++|+||.|.+|.
T Consensus       154 ~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~  196 (334)
T PRK07109        154 QSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQ  196 (334)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCch
Confidence            678999999999999999876     36999999999998874

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.93  E-value=6.7e-24  Score=183.00  Aligned_cols=172  Identities=18%  Similarity=0.170  Sum_probs=134.6

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .||+++||||+|+||++++++|+++|++|++++|+.....+..+.+++   .+.++.++.+|++|.+++.++++.     
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRS---TGVKAAAYSIDLSNPEAIAPGIAELLEQF   81 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---CCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            458999999999999999999999999999999876444333333332   235788999999999998887764     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +++|+||||||......    ..+..+..+++|+.++..    +++.+++.+.++||++||...++           +..
T Consensus        82 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~  150 (241)
T PRK07454         82 GCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARN-----------AFP  150 (241)
T ss_pred             CCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCc-----------CCC
Confidence            57999999999754332    223445568889988655    44556666678999999987763           233


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +..+|+.+|.+.+.+++.++.+   .|+++++|+||.+-+|.
T Consensus       151 ~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~  192 (241)
T PRK07454        151 QWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPL  192 (241)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCc
Confidence            4678999999999999998866   69999999999998874

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.93  E-value=2.6e-24  Score=186.45  Aligned_cols=170  Identities=16%  Similarity=0.163  Sum_probs=130.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEE-ecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIV-DNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      ++++||||+|+||++++++|+++|++|+++ +|+....++..+.++.   .+.++.++.+|++|.+++.+++++     +
T Consensus         5 ~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          5 KVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEA---LGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            899999999999999999999999998874 5544333333333332   245788899999999999888865     5


Q ss_pred             CCcEEEEcccccCcCCCCcCh----HHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~~~~~----~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||.....+..+.+    ...+++|+.++..+++++    ++.+.++||++||...+           .+.++
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-----------~~~~~  150 (250)
T PRK08063         82 RLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSI-----------RYLEN  150 (250)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhc-----------cCCCC
Confidence            799999999975544433332    335678988866655544    45566799999997654           23345


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.||.+.+.+++.++.+   .|+++++++||.+.++.
T Consensus       151 ~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~  191 (250)
T PRK08063        151 YTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDA  191 (250)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCch
Confidence            778999999999999999876   78999999999998765

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.93  E-value=5e-24  Score=185.77  Aligned_cols=170  Identities=15%  Similarity=0.174  Sum_probs=133.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+||||||+|+||++++++|+++|++|++++|+ .+.+++.+.+.+.   +.++.++++|+++.+++++++++     +
T Consensus        15 ~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   90 (258)
T PRK06935         15 GKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE---GRKVTFVQVDLTKPESAEKVVKEALEEFG   90 (258)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc---CCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999886 3333333333322   35688999999999999888764     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHH----HHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~----~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|++|||||.....+    ..++.+..+++|+.++.    .+++.|++.+.++||++||...+.           +.+.
T Consensus        91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  159 (258)
T PRK06935         91 KIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQ-----------GGKF  159 (258)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhcc-----------CCCC
Confidence            7999999999754332    23344557788888854    455666677778999999987652           2234


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.+|++.+.+++.++++   .|+++++|+||.|..+.
T Consensus       160 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~  200 (258)
T PRK06935        160 VPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTAN  200 (258)
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccc
Confidence            678999999999999999987   68999999999998875

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3.7e-24  Score=187.73  Aligned_cols=163  Identities=18%  Similarity=0.205  Sum_probs=132.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      ++|+||||+||||++++++|+++|++|++++|+..+...           ..+++++++|++|.++++++++.     ++
T Consensus         5 ~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-----------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   73 (270)
T PRK06179          5 KVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP-----------IPGVELLELDVTDDASVQAAVDEVIARAGR   73 (270)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-----------cCCCeeEEeecCCHHHHHHHHHHHHHhCCC
Confidence            789999999999999999999999999999986433210           14678899999999999988865     57


Q ss_pred             CcEEEEcccccCcCCC----CcChHHHHHHHHHHHHHHHHH----HHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGES----TLDPLKYYHNITSNTLVVLES----MARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~~----~~~~~~~~~~n~~~t~~ll~~----~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +|+||||||.......    .++....+++|+.++..+++.    |++.+.++||++||...+.           +.+..
T Consensus        74 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~  142 (270)
T PRK06179         74 IDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFL-----------PAPYM  142 (270)
T ss_pred             CCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccC-----------CCCCc
Confidence            9999999998654332    234566788999986665544    6777888999999976652           23346


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      ..|+.||.+.+.+++.++.+   +|+++++++||.+.++..
T Consensus       143 ~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~  183 (270)
T PRK06179        143 ALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFD  183 (270)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccc
Confidence            78999999999999999876   699999999999998764

>PRK06398 aldose dehydrogenase; Validated

Probab=99.92  E-value=5.5e-24  Score=185.71  Aligned_cols=160  Identities=13%  Similarity=0.136  Sum_probs=128.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||++++++|+++|++|++++|+....              .++.++++|++|.+++++++++     +
T Consensus         6 gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~--------------~~~~~~~~D~~~~~~i~~~~~~~~~~~~   71 (258)
T PRK06398          6 DKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY--------------NDVDYFKVDVSNKEQVIKGIDYVISKYG   71 (258)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc--------------CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999998764321              2578899999999999888765     5


Q ss_pred             CCcEEEEcccccCcCCCC----cChHHHHHHHHHHHHHH----HHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~~----~~~~~~~~~n~~~t~~l----l~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||.....+..    ++.++.+++|+.++..+    ++.|++.+.++||++||...+           .+.++
T Consensus        72 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~~~  140 (258)
T PRK06398         72 RIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSF-----------AVTRN  140 (258)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhc-----------cCCCC
Confidence            799999999985443332    23445678999996665    455555666899999997765           23445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc--CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN--SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~--~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.||++.+.+++.++.|  .++++++|+||.|.++.
T Consensus       141 ~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~  180 (258)
T PRK06398        141 AAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPL  180 (258)
T ss_pred             CchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchH
Confidence            789999999999999999987  34999999999997763

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.92  E-value=2.9e-24  Score=186.79  Aligned_cols=172  Identities=15%  Similarity=0.099  Sum_probs=133.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+|+||++++++|+++|++|++++|+.....+..+.++.   .+.++.++.+|++|.++++++++.     +
T Consensus         9 ~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   85 (254)
T PRK08085          9 GKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQ---EGIKAHAAPFNVTHKQEVEAAIEHIEKDIG   85 (254)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHh---cCCeEEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            38999999999999999999999999999999865444443333332   234677889999999999888754     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHH----HHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLES----MARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~----~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||.....+    ..++.++.+++|+.++..+++.    +++.+.++||++||....           .+.++
T Consensus        86 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-----------~~~~~  154 (254)
T PRK08085         86 PIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSE-----------LGRDT  154 (254)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhc-----------cCCCC
Confidence            7999999999754332    2334455788999886665544    444566799999996543           22344


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      ...|+.+|++.+.+++.++.+   +|+++++|+||++.++..
T Consensus       155 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~  196 (254)
T PRK08085        155 ITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMT  196 (254)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcch
Confidence            678999999999999999887   699999999999998853

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.92  E-value=4.5e-24  Score=185.71  Aligned_cols=173  Identities=12%  Similarity=0.063  Sum_probs=133.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-cchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG-NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      +|+++||||+||||++++++|+++|++|++++|+... ..+..+.++.   .+.++.++.+|++|.+++++++++     
T Consensus         8 ~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~---~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   84 (254)
T PRK06114          8 GQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEA---AGRRAIQIAADVTSKADLRAAVARTEAEL   84 (254)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHh---cCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3899999999999999999999999999999986432 2223333332   235688899999999999888765     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +++|+||||||......    ..++.++.+++|+.++..    +++.|++.+.++||++||.+.+...         +..
T Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------~~~  155 (254)
T PRK06114         85 GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVN---------RGL  155 (254)
T ss_pred             CCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCC---------CCC
Confidence            67999999999864432    233455678899998655    5555666666799999997654211         111


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.+|++.+.+++.++.+   +|+++++++||.+.++.
T Consensus       156 ~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~  197 (254)
T PRK06114        156 LQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPM  197 (254)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcc
Confidence            2578999999999999999986   68999999999998875

>PRK06194 hypothetical protein; Provisional

Probab=99.92  E-value=3.3e-24  Score=189.74  Aligned_cols=170  Identities=14%  Similarity=0.065  Sum_probs=131.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||++++++|+++|++|++++|+.....+..+.+..   .+.++.++.+|++|.++++++++.     +
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   82 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRA---QGAEVLGVRTDVSDAAQVEALADAALERFG   82 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh---cCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999999865443333333322   235688899999999999888764     5


Q ss_pred             CCcEEEEcccccCcCCC----CcChHHHHHHHHHHHHHHH----HHHHHcCC------CEEEEEcccccccCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGES----TLDPLKYYHNITSNTLVVL----ESMARHGV------DTLIYSSTCATYGEPEKMPITE  210 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~----~~~~~~~~~~n~~~t~~ll----~~~~~~~~------~riV~~SS~~~~g~~~~~~~~e  210 (296)
                      ++|+||||||.......    .+.+...+++|+.++.+++    +.|.+.+.      ++||++||.+.+.         
T Consensus        83 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~---------  153 (287)
T PRK06194         83 AVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLL---------  153 (287)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc---------
Confidence            79999999998655432    2344556889999966644    44666654      6899999987763         


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc-----CCCcEEEEecCeeecC
Q 022471          211 ETPQAPINPYGKAKKMAEDIILDFSKN-----SDMAVMILRYFNVIGS  253 (296)
Q Consensus       211 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~gi~~~~lrpg~v~Gp  253 (296)
                        +.++.++|+.||++.+.+++.++.+     .+++++++.||.|..+
T Consensus       154 --~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~  199 (287)
T PRK06194        154 --APPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTG  199 (287)
T ss_pred             --CCCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCc
Confidence              2234678999999999999999876     3588999999998665

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.92  E-value=4.6e-24  Score=186.43  Aligned_cols=174  Identities=20%  Similarity=0.129  Sum_probs=137.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc------
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------  143 (296)
                      +|+++||||++|||+++|++|++.|++|++++|+.+..++....+......+.++..+.||+++.++++++++.      
T Consensus         8 gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~   87 (270)
T KOG0725|consen    8 GKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKFF   87 (270)
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHhC
Confidence            49999999999999999999999999999999887766666655554443346789999999999888777654      


Q ss_pred             CCCcEEEEcccccCcC-C----CCcChHHHHHHHHHH-----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVG-E----STLDPLKYYHNITSN-----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~-~----~~~~~~~~~~~n~~~-----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~  213 (296)
                      +++|++|||||..... .    .++.++..+++|+.|     +..+.+.+++.+.+.|+++||.+.+.           +
T Consensus        88 GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~-----------~  156 (270)
T KOG0725|consen   88 GKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVG-----------P  156 (270)
T ss_pred             CCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEecccccc-----------C
Confidence            7899999999986543 2    444455567788886     23344444555677999999976652           2


Q ss_pred             CCCC-ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          214 QAPI-NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       214 ~~~~-~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..+. ..|+.||.+.+++++.++.|   +|+|+++|.||.|..+.
T Consensus       157 ~~~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~  201 (270)
T KOG0725|consen  157 GPGSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL  201 (270)
T ss_pred             CCCCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc
Confidence            1122 78999999999999999998   89999999999999986

>PRK08643 acetoin reductase; Validated

Probab=99.92  E-value=4.8e-24  Score=185.56  Aligned_cols=170  Identities=21%  Similarity=0.184  Sum_probs=131.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+++||||+||||++++++|+++|++|++++|+....++..+.+...   +.++.++++|++|.+++++++++     ++
T Consensus         3 k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK08643          3 KVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD---GGKAIAVKADVSDRDQVFAAVRQVVDTFGD   79 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            79999999999999999999999999999998755444444433322   35678899999999998888765     57


Q ss_pred             CcEEEEcccccCcCCC----CcChHHHHHHHHHHHHHHH----HHHHHcC-CCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGES----TLDPLKYYHNITSNTLVVL----ESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~~----~~~~~~~~~~n~~~t~~ll----~~~~~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      +|+||||||.......    .+..++.+++|+.++..++    +.+++.+ .++||++||...+.           +.+.
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~  148 (256)
T PRK08643         80 LNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVV-----------GNPE  148 (256)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcccccc-----------CCCC
Confidence            9999999997543332    2334567889999866544    4444443 36899999976541           2234


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.+|++.+.+++.++.+   .|+++++|+||.+.+|.
T Consensus       149 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~  189 (256)
T PRK08643        149 LAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPM  189 (256)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChh
Confidence            678999999999999999876   78999999999998875

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.92  E-value=6.2e-24  Score=185.06  Aligned_cols=169  Identities=18%  Similarity=0.152  Sum_probs=132.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      +++|||||+|+||++++++|+++|++|++++|+.... +..+.+..   .+.++.++.+|+++.+++++++++     ++
T Consensus         8 ~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (258)
T PRK08628          8 KVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRA---LQPRAEFVQVDLTDDAQCRDAVEQTVAKFGR   83 (258)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHh---cCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            8999999999999999999999999999998865443 33333322   235788999999999999888865     57


Q ss_pred             CcEEEEcccccCcCC---CCcChHHHHHHHHHHHHHHHHHHHH---cCCCEEEEEcccccccCCCCCCCCCCCCCCCCCh
Q 022471          146 FDAVMHFAAVAYVGE---STLDPLKYYHNITSNTLVVLESMAR---HGVDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~---~~~~~~~~~~~n~~~t~~ll~~~~~---~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~  219 (296)
                      +|+||||||......   ..++.++.++.|+.++..+.+.+.+   .+.++||++||...+           .+..+...
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~-----------~~~~~~~~  152 (258)
T PRK08628         84 IDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTAL-----------TGQGGTSG  152 (258)
T ss_pred             CCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhc-----------cCCCCCch
Confidence            999999999743322   2244556788999987776665532   234789999997664           22345678


Q ss_pred             HHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          220 YGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       220 Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      |+.||++.+.+++.++.+   ++++++.|+||.|++|.
T Consensus       153 Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~  190 (258)
T PRK08628        153 YAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPL  190 (258)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHH
Confidence            999999999999999875   68999999999999985

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=5e-24  Score=185.46  Aligned_cols=166  Identities=18%  Similarity=0.135  Sum_probs=130.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+++||||+||||++++++|+++|++|++++++..   +..+.++.     .++.++.+|++|.+++++++++     ++
T Consensus         8 k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~---~~~~~l~~-----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   79 (255)
T PRK06463          8 KVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAE---NEAKELRE-----KGVFTIKCDVGNRDQVKKSKEVVEKEFGR   79 (255)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcH---HHHHHHHh-----CCCeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            89999999999999999999999999998875432   22222221     2477899999999999988765     57


Q ss_pred             CcEEEEcccccCcCC----CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGE----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +|+||||||.....+    ..+..+..+++|+.+    ++.+++.+++.+.++||++||...++.          +..+.
T Consensus        80 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~----------~~~~~  149 (255)
T PRK06463         80 VDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGT----------AAEGT  149 (255)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCC----------CCCCc
Confidence            999999999854322    233445678899999    466677777666789999999877631          12345


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..|+.||++.+.+++.++.|   .|+++++++||.|-.+.
T Consensus       150 ~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~  189 (255)
T PRK06463        150 TFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDM  189 (255)
T ss_pred             cHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCch
Confidence            78999999999999999987   68999999999987653

>PRK05599 hypothetical protein; Provisional

Probab=99.92  E-value=1.3e-23  Score=182.09  Aligned_cols=204  Identities=15%  Similarity=0.138  Sum_probs=145.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+++||||++|||++++++|+ +|++|++++|+..+.++..+.+++..  ...+.++++|++|.+++++++++     ++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   77 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRG--ATSVHVLSFDAQDLDTHRELVKQTQELAGE   77 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcc--CCceEEEEcccCCHHHHHHHHHHHHHhcCC
Confidence            579999999999999999999 59999999987655554444444321  13478899999999999888765     68


Q ss_pred             CcEEEEcccccCcCC----CCcChHHHHHHHHHHHH----HHHHHHHHcC-CCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGE----STLDPLKYYHNITSNTL----VVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~----~ll~~~~~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      +|++|||||......    ..+...+.+++|+.+..    .+++.|.+++ .++||++||.+.+           .+.+.
T Consensus        78 id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~-----------~~~~~  146 (246)
T PRK05599         78 ISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGW-----------RARRA  146 (246)
T ss_pred             CCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccc-----------cCCcC
Confidence            999999999854322    11222345667777744    4567776654 4799999997654           22334


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCCcceEE
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVC  291 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  291 (296)
                      ...|+.||++.+.+++.++.|   .|++++++.||.|.++..... ...  +....+-.+...++..+..+.+...++
T Consensus       147 ~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~-~~~--~~~~~pe~~a~~~~~~~~~~~~~~~~~  221 (246)
T PRK05599        147 NYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGM-KPA--PMSVYPRDVAAAVVSAITSSKRSTTLW  221 (246)
T ss_pred             CcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCC-CCC--CCCCCHHHHHHHHHHHHhcCCCCceEE
Confidence            678999999999999999987   689999999999988742211 111  100112267777888888776544444

>PLN02253 xanthoxin dehydrogenase

Probab=99.92  E-value=5.3e-24  Score=187.84  Aligned_cols=170  Identities=15%  Similarity=0.105  Sum_probs=130.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+++||||+||||++++++|+++|++|++++|+....++..+   ++ ..+.++.++++|++|.+++++++++     +
T Consensus        18 ~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g   93 (280)
T PLN02253         18 GKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCD---SL-GGEPNVCFFHCDVTVEDDVSRAVDFTVDKFG   93 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---Hh-cCCCceEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            3899999999999999999999999999999876433332222   22 1235688999999999999888764     5


Q ss_pred             CCcEEEEcccccCcC------CCCcChHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVG------ESTLDPLKYYHNITSNTLVVLESMA----RHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~------~~~~~~~~~~~~n~~~t~~ll~~~~----~~~~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                      ++|+||||||.....      ...++....+++|+.++..+++++.    +.+.+++|++||....           .+.
T Consensus        94 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~-----------~~~  162 (280)
T PLN02253         94 TLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASA-----------IGG  162 (280)
T ss_pred             CCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhc-----------ccC
Confidence            799999999975321      1234456789999999877665554    4455689999886542           111


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +....|+.||++.+.+++.++.+   .|+++++++||.+.++.
T Consensus       163 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~  205 (280)
T PLN02253        163 LGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTAL  205 (280)
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccc
Confidence            23458999999999999999987   58999999999998864

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.92  E-value=7.3e-24  Score=184.06  Aligned_cols=171  Identities=18%  Similarity=0.128  Sum_probs=128.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEec-CCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN-LSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      +|+++||||+||||++++++|+++|++|++.++ +....++..+.+..   .+..+..+.+|+++.+++..++++     
T Consensus         4 ~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (252)
T PRK12747          4 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQS---NGGSAFSIGANLESLHGVEALYSSLDNEL   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHh---cCCceEEEecccCCHHHHHHHHHHHHHHh
Confidence            389999999999999999999999999988753 22222222222222   235677889999999887765542     


Q ss_pred             ------CCCcEEEEcccccCcCCCC----cChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCC
Q 022471          144 ------NAFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEE  211 (296)
Q Consensus       144 ------~~~D~vi~~Ag~~~~~~~~----~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~  211 (296)
                            .++|+||||||........    +..+..+++|+.++..+++++.+.  ..++||++||.+.+           
T Consensus        81 ~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~-----------  149 (252)
T PRK12747         81 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATR-----------  149 (252)
T ss_pred             hhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccc-----------
Confidence                  2799999999975433222    234557789999988766655442  23699999998765           


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       212 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      .+.++...|+.||++++.+++.++.+   +|+++++|.||.|.++.
T Consensus       150 ~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~  195 (252)
T PRK12747        150 ISLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDM  195 (252)
T ss_pred             cCCCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCch
Confidence            23344678999999999999999887   68999999999999885

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.92  E-value=5.7e-24  Score=184.16  Aligned_cols=169  Identities=14%  Similarity=0.153  Sum_probs=132.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+++||||+|+||++++++|+++|++|++++|+.  ..+..+.+++.   +.++.++.+|+++.+++.+++++     +
T Consensus         5 ~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~--~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (248)
T TIGR01832         5 GKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEAL---GRRFLSLTADLSDIEAIKALVDSAVEEFG   79 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch--HHHHHHHHHhc---CCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999998753  22333333332   35688999999999999887764     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHH----HcC-CCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMA----RHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~----~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||......    ..+..++.+++|+.++..+++++.    +.+ .++||++||...+..           ..
T Consensus        80 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~~  148 (248)
T TIGR01832        80 HIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQG-----------GI  148 (248)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccC-----------CC
Confidence            7999999999865432    223445668899998776665553    444 469999999877632           22


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ....|+.||++.+.+++.++.+   +|+++++++||.|..+.
T Consensus       149 ~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~  190 (248)
T TIGR01832       149 RVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNN  190 (248)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcc
Confidence            3568999999999999999988   58999999999998875

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.92  E-value=4.4e-24  Score=185.14  Aligned_cols=171  Identities=15%  Similarity=0.147  Sum_probs=133.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+++||||+|+||++++++|+++|++|++++|+.....+..+.+.    .+.++.++++|++|.++++++++.     +
T Consensus         5 ~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   80 (252)
T PRK06138          5 GRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA----AGGRAFARQGDVGSAEAVEALVDFVAARWG   80 (252)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh----cCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999986543333333222    235688999999999999888764     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||......    ..+...+.+++|+.++..    +++++++.+.++||++||...+.           +..+
T Consensus        81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~-----------~~~~  149 (252)
T PRK06138         81 RLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALA-----------GGRG  149 (252)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhcc-----------CCCC
Confidence            8999999999754332    223345568899998755    55556667778999999976541           2234


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      ..+|+.+|.+.+.+++.++.+   .|+++++++||+++++..
T Consensus       150 ~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~  191 (252)
T PRK06138        150 RAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYF  191 (252)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcch
Confidence            678999999999999999877   489999999999999864

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.4e-23  Score=181.65  Aligned_cols=202  Identities=13%  Similarity=0.091  Sum_probs=145.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+++||||+||||++++++|+++|++|++++|+..+..+..+.+....+ +.+++++++|++|.+++.+++++     ++
T Consensus         3 k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          3 QKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYP-GIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCC-CceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            7899999999999999999999999999999876544444333333221 35788999999999999887764     57


Q ss_pred             CcEEEEcccccCcCCC----CcChHHHHHHHHHHHHHHHHH----HHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGES----TLDPLKYYHNITSNTLVVLES----MARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~~----~~~~~~~~~~n~~~t~~ll~~----~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +|++|||||+......    .+.....+++|+.++..++++    +++.+.++||++||...+..          .+.+.
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------~~~~~  151 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRG----------LPGVK  151 (248)
T ss_pred             CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccC----------CCCCc
Confidence            9999999998654332    233455788999997665554    45667789999999665421          11235


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      ..|+.||++.+.+++.++.+   .++++++++||++.++..... +..  +..-........+++.+.+++.
T Consensus       152 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~-~~~--~~~~~~~~~a~~i~~~~~~~~~  220 (248)
T PRK08251        152 AAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKA-KST--PFMVDTETGVKALVKAIEKEPG  220 (248)
T ss_pred             ccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcc-ccC--CccCCHHHHHHHHHHHHhcCCC
Confidence            78999999999999999876   589999999999988753321 111  1011112556667777766654

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.92  E-value=5.7e-24  Score=187.57  Aligned_cols=171  Identities=16%  Similarity=0.142  Sum_probs=132.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |++|||||+|+||+++++.|+++|++|++++|+....+...+.+..... +.++.++.+|++|.+++++ +++     ++
T Consensus         4 k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~   81 (280)
T PRK06914          4 KIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNL-QQNIKVQQLDVTDQNSIHN-FQLVLKEIGR   81 (280)
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCC-CCceeEEecCCCCHHHHHH-HHHHHHhcCC
Confidence            7899999999999999999999999999999876544444333332211 2478899999999998877 543     67


Q ss_pred             CcEEEEcccccCcCCCC----cChHHHHHHHHHHHHHHHHH----HHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVVLES----MARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~~~----~~~~~~~~~n~~~t~~ll~~----~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +|+||||||........    +...+.+++|+.++..+++.    |++.+.++||++||...+           .+..+.
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~-----------~~~~~~  150 (280)
T PRK06914         82 IDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGR-----------VGFPGL  150 (280)
T ss_pred             eeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccc-----------CCCCCC
Confidence            99999999976543322    34455678999997665555    566777899999996543           123456


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..|+.||.+.+.++++++.+   +|+++++++||.++++.
T Consensus       151 ~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~  190 (280)
T PRK06914        151 SPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNI  190 (280)
T ss_pred             chhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccch
Confidence            78999999999999999854   79999999999999884

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.92  E-value=3.2e-24  Score=188.55  Aligned_cols=167  Identities=15%  Similarity=0.080  Sum_probs=125.8

Q ss_pred             cEEEEEcCCC--hhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           71 THVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        71 k~vlVTGasG--~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      |++|||||++  |||+++|++|+++|++|++.+|+....+...+..++.    ....++++|++|.+++++++++     
T Consensus         8 k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~----g~~~~~~~Dv~d~~~v~~~~~~~~~~~   83 (271)
T PRK06505          8 KRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESL----GSDFVLPCDVEDIASVDAVFEALEKKW   83 (271)
T ss_pred             CEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhc----CCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            8999999997  9999999999999999999987543222222221211    2235789999999999888765     


Q ss_pred             CCCcEEEEcccccCc----C----CCCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYV----G----ESTLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEE  211 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~----~----~~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~  211 (296)
                      +++|+||||||....    .    ...+++...+++|+.++..    +++.|++ + ++||++||.+..           
T Consensus        84 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~-~-G~Iv~isS~~~~-----------  150 (271)
T PRK06505         84 GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD-G-GSMLTLTYGGST-----------  150 (271)
T ss_pred             CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc-C-ceEEEEcCCCcc-----------
Confidence            789999999997532    1    1234455677889988555    4455543 3 689999997543           


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       212 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      .+.+...+|+.||++.+.+++.++.|   +||++++|.||.|..+.
T Consensus       151 ~~~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~  196 (271)
T PRK06505        151 RVMPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLA  196 (271)
T ss_pred             ccCCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccc
Confidence            22334678999999999999999988   68999999999998764

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.92  E-value=6.9e-24  Score=184.24  Aligned_cols=171  Identities=17%  Similarity=0.204  Sum_probs=135.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+++||||+|+||++++++|+++|++|++++|+..+.++..+.+++.   +.++.++.+|++|.+++.+++++     +
T Consensus         7 ~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   83 (253)
T PRK06172          7 GKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA---GGEALFVACDVTRDAEVKALVEQTIAAYG   83 (253)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            389999999999999999999999999999998765444444444332   35688999999999999887764     5


Q ss_pred             CCcEEEEcccccCcC-----CCCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVG-----ESTLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~-----~~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||.....     ...++.++.+++|+.++..    +++.+.+.+.+++|++||...+.           +..
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~-----------~~~  152 (253)
T PRK06172         84 RLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLG-----------AAP  152 (253)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcc-----------CCC
Confidence            799999999974322     1334556678899998654    45566666667999999987763           334


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.+|++.+.+++.++.+   .|+++++++||.|-.+.
T Consensus       153 ~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~  194 (253)
T PRK06172        153 KMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDM  194 (253)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChh
Confidence            5788999999999999999987   58999999999997765

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.92  E-value=9.4e-24  Score=184.81  Aligned_cols=171  Identities=15%  Similarity=0.084  Sum_probs=134.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+++||||+|+||++++++|+++|++|++++|+..+.++..+.+..   .+.++.++++|++|.+++++++++     +
T Consensus        10 ~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (265)
T PRK07097         10 GKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRE---LGIEAHGYVCDVTDEDGVQAMVSQIEKEVG   86 (265)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh---cCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            38999999999999999999999999999998765444433333332   235788999999999999998865     6


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||......    ..+...+.+++|+.++..    +++.|++.+.++||++||....           .+..+
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~~~  155 (265)
T PRK07097         87 VIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSE-----------LGRET  155 (265)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCcccc-----------CCCCC
Confidence            7999999999865432    333445567789888554    5555666667899999996532           12334


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.+|++.+.+++.++++   .|++++.|+||.+.++.
T Consensus       156 ~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  196 (265)
T PRK07097        156 VSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQ  196 (265)
T ss_pred             CccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccc
Confidence            678999999999999999988   58999999999999885

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.92  E-value=9.9e-24  Score=182.23  Aligned_cols=202  Identities=15%  Similarity=0.113  Sum_probs=145.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc--CCCc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--NAFD  147 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~--~~~D  147 (296)
                      ||+++||||+||||.+++++|+++|++|++++|+..+.++..+.+...  .+.+++++++|++|.+++++++++  .++|
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d   78 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRAR--GAVAVSTHELDILDTASHAAFLDSLPALPD   78 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHh--cCCeEEEEecCCCChHHHHHHHHHHhhcCC
Confidence            589999999999999999999999999999998765444333333221  125788999999999999988765  4689


Q ss_pred             EEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCCh
Q 022471          148 AVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (296)
Q Consensus       148 ~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~  219 (296)
                      +||||||......    ..++..+.+++|+.++..+++++    .+.+.+++|++||....           .+.+....
T Consensus        79 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-----------~~~~~~~~  147 (243)
T PRK07102         79 IVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGD-----------RGRASNYV  147 (243)
T ss_pred             EEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEeccccc-----------CCCCCCcc
Confidence            9999999754332    22333457889999977766554    44567899999996543           12234568


Q ss_pred             HHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          220 YGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       220 Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      |+.+|.+.+.+++.++.+   .|+++++++||.++++.....-  .+.........+...+.+.+.+++.
T Consensus       148 Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~--~~~~~~~~~~~~a~~i~~~~~~~~~  215 (243)
T PRK07102        148 YGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLK--LPGPLTAQPEEVAKDIFRAIEKGKD  215 (243)
T ss_pred             cHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhccC--CCccccCCHHHHHHHHHHHHhCCCC
Confidence            999999999999999765   6899999999999998532210  0000011112566777777776654

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.92  E-value=3.3e-24  Score=188.74  Aligned_cols=167  Identities=13%  Similarity=0.018  Sum_probs=125.8

Q ss_pred             cEEEEEcCC--ChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           71 THVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        71 k~vlVTGas--G~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      |+++||||+  +|||++++++|+++|++|++++|+.+..+. .+.+.+...  .. .++++|++|.+++++++++     
T Consensus         6 k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~-~~~~~~~~~--~~-~~~~~Dv~d~~~v~~~~~~i~~~~   81 (274)
T PRK08415          6 KKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKR-VEPIAQELG--SD-YVYELDVSKPEHFKSLAESLKKDL   81 (274)
T ss_pred             cEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHH-HHHHHHhcC--Cc-eEEEecCCCHHHHHHHHHHHHHHc
Confidence            899999997  899999999999999999999886421122 222222111  23 5789999999999888765     


Q ss_pred             CCCcEEEEcccccCc----CC----CCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYV----GE----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEE  211 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~----~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~  211 (296)
                      +++|+||||||....    .+    ..+..+..+++|+.+...    +++.|++  .++||++||.+..           
T Consensus        82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~g~Iv~isS~~~~-----------  148 (274)
T PRK08415         82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--GASVLTLSYLGGV-----------  148 (274)
T ss_pred             CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--CCcEEEEecCCCc-----------
Confidence            789999999997532    11    233445678899998544    5555544  2689999996543           


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       212 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      .+.+....|+.||++.+.+++.++.|   +||++++|.||.|..+.
T Consensus       149 ~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~  194 (274)
T PRK08415        149 KYVPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLA  194 (274)
T ss_pred             cCCCcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHH
Confidence            22334678999999999999999987   68999999999998763

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.92  E-value=6.5e-24  Score=185.53  Aligned_cols=168  Identities=18%  Similarity=0.177  Sum_probs=130.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+++||||+||||++++++|+++|++|++++|+....++..   ++.   +.++.++++|++|.+++++++++     +
T Consensus         6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   79 (261)
T PRK08265          6 GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVA---ASL---GERARFIATDITDDAAIERAVATVVARFG   79 (261)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHh---CCeeEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            389999999999999999999999999999998654332222   222   24688899999999999888765     6


Q ss_pred             CCcEEEEcccccCcC---CCCcChHHHHHHHHHHHHHHHHHHHH---cCCCEEEEEcccccccCCCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVG---ESTLDPLKYYHNITSNTLVVLESMAR---HGVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~---~~~~~~~~~~~~n~~~t~~ll~~~~~---~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (296)
                      ++|+||||||.....   ...+...+.+++|+.++..+++.+.+   .+.++||++||.+.+           .+.+...
T Consensus        80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~-----------~~~~~~~  148 (261)
T PRK08265         80 RVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAK-----------FAQTGRW  148 (261)
T ss_pred             CCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhc-----------cCCCCCc
Confidence            899999999974322   23344556788899986665554432   345799999997654           2233467


Q ss_pred             hHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          219 PYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       219 ~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      .|+.+|.+.+.+++.++.+   +|+++++|+||.+.++.
T Consensus       149 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~  187 (261)
T PRK08265        149 LYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRV  187 (261)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChh
Confidence            8999999999999999977   68999999999988764

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.92  E-value=7.3e-24  Score=183.99  Aligned_cols=170  Identities=16%  Similarity=0.144  Sum_probs=132.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+|+||||+||||++++++|+++|++|++++|+..+.+...+.+.+   .+.++.++++|++|.+++++++++     ++
T Consensus         9 k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (252)
T PRK07035          9 KIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVA---AGGKAEALACHIGEMEQIDALFAHIRERHGR   85 (252)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            8999999999999999999999999999999865444444433332   234678899999999999887765     57


Q ss_pred             CcEEEEcccccCc-C----CCCcChHHHHHHHHHHHHHH----HHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYV-G----ESTLDPLKYYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       146 ~D~vi~~Ag~~~~-~----~~~~~~~~~~~~n~~~t~~l----l~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      +|+||||||.... .    ...+..+..+++|+.++..+    ++.+++.+.++||++||...+           .+.++
T Consensus        86 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-----------~~~~~  154 (252)
T PRK07035         86 LDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGV-----------SPGDF  154 (252)
T ss_pred             CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhc-----------CCCCC
Confidence            9999999996421 1    12333456788999996654    455566667899999996554           23345


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      .+.|+.||++++.++++++.+   .|+++++++||.|..+.
T Consensus       155 ~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~  195 (252)
T PRK07035        155 QGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKF  195 (252)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcc
Confidence            778999999999999999887   58999999999998764

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.92  E-value=8.2e-24  Score=185.69  Aligned_cols=171  Identities=18%  Similarity=0.168  Sum_probs=134.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+|+||||+|+||++++++|+++|++|++++|+....++..+.+..   .+.++.++.+|++|.+++.++++.     ++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   77 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLRE---AGGDGFYQRCDVRDYSQLTALAQACEEKWGG   77 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5799999999999999999999999999999865444433333332   245788899999999998887754     57


Q ss_pred             CcEEEEcccccCcCCCCc----ChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~~~~----~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +|+||||||........+    ..++.+++|+.++..    +++.|++.+.++||++||...+.           +....
T Consensus        78 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~~~~~  146 (270)
T PRK05650         78 IDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLM-----------QGPAM  146 (270)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcC-----------CCCCc
Confidence            999999999865443333    334467788877554    66667777778999999987652           33457


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      +.|+.+|++.+.+++.++.+   .|+++++++||.+.++..
T Consensus       147 ~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~  187 (270)
T PRK05650        147 SSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLL  187 (270)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcc
Confidence            89999999999999999987   589999999999998753

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.92  E-value=1e-23  Score=183.90  Aligned_cols=169  Identities=15%  Similarity=0.060  Sum_probs=127.4

Q ss_pred             cEEEEEcCC--ChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           71 THVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        71 k~vlVTGas--G~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      |+++||||+  +|||++++++|+++|++|++++|+.+..+...+..++. . +.++.++++|++|.+++++++++     
T Consensus         8 k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (257)
T PRK08594          8 KTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTL-E-GQESLLLPCDVTSDEEITACFETIKEEV   85 (257)
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHc-C-CCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence            899999997  89999999999999999999987644333333332222 1 35688899999999999888764     


Q ss_pred             CCCcEEEEcccccCc----CC----CCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYV----GE----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEE  211 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~----~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~  211 (296)
                      +++|++|||||....    ..    ..+.....+++|+.+...    +++.|.+  .++||++||....           
T Consensus        86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~-----------  152 (257)
T PRK08594         86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGE-----------  152 (257)
T ss_pred             CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCc-----------
Confidence            789999999997531    11    222334467788888555    4444433  3699999997653           


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       212 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      .+.+....|+.||++.+.+++.++.|   +||++++|+||.|..+.
T Consensus       153 ~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~  198 (257)
T PRK08594        153 RVVQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLS  198 (257)
T ss_pred             cCCCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHh
Confidence            23344678999999999999999987   68999999999998763

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.92  E-value=5.1e-24  Score=185.58  Aligned_cols=168  Identities=18%  Similarity=0.138  Sum_probs=132.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+++||||+|+||.+++++|+++|++|++++|+....++..+   +.   ..++.++++|++|.+++++++++     +
T Consensus         6 ~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~---~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (257)
T PRK07067          6 GKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAAL---EI---GPAAIAVSLDVTRQDSIDRIVAAAVERFG   79 (257)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH---Hh---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999876543332222   22   23578899999999999888765     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMAR----HG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~----~~-~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||......    ..++....+++|+.++..+++++.+    ++ .++||++||....           .+.+
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~-----------~~~~  148 (257)
T PRK07067         80 GIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGR-----------RGEA  148 (257)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhC-----------CCCC
Confidence            7999999999754332    2344556788999998887777653    22 3589999996542           2234


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.||++.+.+++.++.+   +|+++++++||.|+++.
T Consensus       149 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~  190 (257)
T PRK07067        149 LVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPM  190 (257)
T ss_pred             CCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchh
Confidence            5789999999999999999886   79999999999999985

>PRK09242 tropinone reductase; Provisional

Probab=99.92  E-value=8.7e-24  Score=184.09  Aligned_cols=174  Identities=14%  Similarity=0.128  Sum_probs=136.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+++||||+|+||+++++.|+++|++|++++|+....++..+.+....+ +.++.++.+|+++.+++++++++     +
T Consensus         9 ~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   87 (257)
T PRK09242          9 GQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFP-EREVHGLAADVSDDEDRRAILDWVEDHWD   87 (257)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCC-CCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999999865444444444333221 35788899999999998887764     6


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHH----HHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLE----SMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~----~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||......    ..++..+.+++|+.++..+++    .|++++.++||++||...+.           +..+
T Consensus        88 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~-----------~~~~  156 (257)
T PRK09242         88 GLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLT-----------HVRS  156 (257)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCC-----------CCCC
Confidence            7999999999743322    344455678899998766654    45556668999999977652           3344


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      .+.|+.+|.+.+.+++.++.+   .|++++.++||.+.+|..
T Consensus       157 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~  198 (257)
T PRK09242        157 GAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLT  198 (257)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCccc
Confidence            678999999999999999876   689999999999998863

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.1e-23  Score=185.07  Aligned_cols=191  Identities=16%  Similarity=0.162  Sum_probs=141.2

Q ss_pred             HhcCCCCCCCCCCCCCCCCCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-cchhhhhhhhhCCCCCceEEEE
Q 022471           50 LLKQSPTFSSPSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG-NIGAVKVLQELFPEPGRLQFIY  128 (296)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~  128 (296)
                      ++.+.+.+..+.........+|++|||||+|+||++++++|+++|++|++++|+... .....+.++   ..+.++.++.
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~---~~~~~~~~~~  102 (290)
T PRK06701         26 LMNPLPQFEAPNYKGSGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVE---KEGVKCLLIP  102 (290)
T ss_pred             hCCcccCCCccccccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHH---hcCCeEEEEE
Confidence            333444443333333333344899999999999999999999999999999886432 222222222   2235688999


Q ss_pred             ccCCCHHHHHHHhhc-----CCCcEEEEcccccCcC-----CCCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcc
Q 022471          129 ADLGDAKAVNKFFSE-----NAFDAVMHFAAVAYVG-----ESTLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSST  196 (296)
Q Consensus       129 ~Dl~d~~~v~~~~~~-----~~~D~vi~~Ag~~~~~-----~~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS  196 (296)
                      +|++|.+++.+++++     +++|+||||||.....     ...+...+.+++|+.++..+++++.+.  ..++||++||
T Consensus       103 ~Dl~~~~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS  182 (290)
T PRK06701        103 GDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGS  182 (290)
T ss_pred             ccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEec
Confidence            999999999888765     5799999999975321     123344668899999988888777642  2368999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          197 CATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       197 ~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|..           ......|+.||.+.+.+++.++.+   .|+++++|+||.++++.
T Consensus       183 ~~~~~~-----------~~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~  232 (290)
T PRK06701        183 ITGYEG-----------NETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPL  232 (290)
T ss_pred             ccccCC-----------CCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcc
Confidence            887632           223567999999999999999987   58999999999999875

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.92  E-value=9.5e-24  Score=182.48  Aligned_cols=175  Identities=15%  Similarity=0.108  Sum_probs=137.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhh-hhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVL-QELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      +|+++||||+||||++++++|+++|++|++++|...+..+..+.+ .+....+.++.++.+|++|.+++++++++     
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (249)
T PRK12827          6 SRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEF   85 (249)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            389999999999999999999999999999887544433333222 22222235788999999999999888754     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHH-----HcCCCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMA-----RHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~-----~~~~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                      +++|+||||||......    ..++....+++|+.++..+++++.     +.+.+++|++||...+.           +.
T Consensus        86 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~  154 (249)
T PRK12827         86 GRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVR-----------GN  154 (249)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcC-----------CC
Confidence            57999999999865322    233445678899999999888877     45667999999977652           23


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      .+...|+.+|++.+.+++.++.+   .++++++++||.++++..
T Consensus       155 ~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~  198 (249)
T PRK12827        155 RGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMA  198 (249)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcc
Confidence            34678999999999999999876   589999999999999863

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.92  E-value=1e-23  Score=183.73  Aligned_cols=172  Identities=17%  Similarity=0.130  Sum_probs=131.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+||||||+|+||++++++|+++|++|++++|+........+.+..... ..++.++.+|++|.+++.+++++     ++
T Consensus         3 k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          3 QVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYG-EGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcC-CceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            7899999999999999999999999999999875544444443333221 14688999999999999888765     68


Q ss_pred             CcEEEEcccccCcCCCC----cChHHHHHHHHHHHHHH----HHHHHHcC-CCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVV----LESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~~~----~~~~~~~~~n~~~t~~l----l~~~~~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      +|++|||||........    +..++.+++|+.++..+    ++.|++.+ .++||++||....           .+...
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~-----------~~~~~  150 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGK-----------VGSKH  150 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccc-----------cCCCC
Confidence            99999999976543322    33455678999996654    44555555 4699999996532           11233


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..+|+.||++.+.+++.++.+   +|+++++++||.++++.
T Consensus       151 ~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~  191 (259)
T PRK12384        151 NSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSP  191 (259)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccch
Confidence            578999999999999999865   89999999999988764

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.92  E-value=5.2e-24  Score=185.84  Aligned_cols=169  Identities=21%  Similarity=0.183  Sum_probs=128.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+++||||+||||++++++|+++|++|++++|+....++..+.+++    ..++.++++|++|.+++++++++     ++
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~----~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~   76 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKE----YGEVYAVKADLSDKDDLKNLVKEAWELLGG   76 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh----cCCceEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            5799999999999999999999999999999865444433333332    13678899999999999888864     68


Q ss_pred             CcEEEEcccccCcC--C----CCcChHHHHHHHHHH----HHHHHHHHHH-cCCCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVG--E----STLDPLKYYHNITSN----TLVVLESMAR-HGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~--~----~~~~~~~~~~~n~~~----t~~ll~~~~~-~~~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                      +|+||||||.....  .    ..++..+.+++|+.+    +..+++.+.+ .+.++||++||.+++           .+.
T Consensus        77 id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~-----------~~~  145 (259)
T PRK08340         77 IDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVK-----------EPM  145 (259)
T ss_pred             CCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccC-----------CCC
Confidence            99999999974321  1    122233345667766    4445666653 455799999998764           234


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ++...|+.||++.+.+++.++.+   .||+++.|.||.+-.|.
T Consensus       146 ~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~  188 (259)
T PRK08340        146 PPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPG  188 (259)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCcc
Confidence            45678999999999999999987   68999999999998774

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.92  E-value=6.3e-24  Score=186.94  Aligned_cols=168  Identities=15%  Similarity=0.066  Sum_probs=132.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+|+||||+|+||++++++|+++|++|++++|+....++..    +..  +..+.++++|++|.+++.++++.     ++
T Consensus         4 k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~----~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (275)
T PRK08263          4 KVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLA----EKY--GDRLLPLALDVTDRAAVFAAVETAVEHFGR   77 (275)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----Hhc--cCCeeEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            78999999999999999999999999999997643322211    111  24678889999999998887764     57


Q ss_pred             CcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHH----HHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVL----ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll----~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +|+||||||......    ..++..+.+++|+.++..++    +.+++.+.+++|++||.+.+.           +.+..
T Consensus        78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~~~~~  146 (275)
T PRK08263         78 LDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGIS-----------AFPMS  146 (275)
T ss_pred             CCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcC-----------CCCCc
Confidence            999999999865433    33455667889999965544    445677778999999987763           23346


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      +.|+.+|++.+.+++.++.+   +|+++++++||.+.++..
T Consensus       147 ~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~  187 (275)
T PRK08263        147 GIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWA  187 (275)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCcc
Confidence            78999999999999999886   799999999999987653

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=8.9e-24  Score=182.97  Aligned_cols=169  Identities=15%  Similarity=0.178  Sum_probs=133.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      ++++||||+|+||++++++|+++|++|++++|+..+.....+.+..    +.++.++.+|++|.+++++++++     ++
T Consensus         6 ~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (251)
T PRK07231          6 KVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA----GGRAIAVAADVSDEADVEAAVAAALERFGS   81 (251)
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc----CCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            8999999999999999999999999999999876544433333222    35688999999999999988764     57


Q ss_pred             CcEEEEcccccCcCC-----CCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGE-----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~-----~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      +|+||||||......     ..+..++.+++|+.++..    +++++++.+.++||++||...+.           +.++
T Consensus        82 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~  150 (251)
T PRK07231         82 VDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLR-----------PRPG  150 (251)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcC-----------CCCC
Confidence            999999999743221     334455678899988555    44555556778999999987763           3445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.+|.+.+.+++.++.+   .++++++++||.+.++.
T Consensus       151 ~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~  191 (251)
T PRK07231        151 LGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGL  191 (251)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCc
Confidence            778999999999999999876   48999999999997765

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.92  E-value=8.1e-24  Score=184.66  Aligned_cols=168  Identities=15%  Similarity=0.039  Sum_probs=126.4

Q ss_pred             ccEEEEEcCC--ChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----
Q 022471           70 VTHVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (296)
Q Consensus        70 ~k~vlVTGas--G~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (296)
                      +|+++||||+  +|||++++++|+++|++|++++|+.+..+.. +.+.+..   ....++++|++|.+++++++++    
T Consensus        10 ~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~-~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~   85 (258)
T PRK07533         10 GKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYV-EPLAEEL---DAPIFLPLDVREPGQLEAVFARIAEE   85 (258)
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHH-HHHHHhh---ccceEEecCcCCHHHHHHHHHHHHHH
Confidence            3999999998  5999999999999999999999864322222 2222211   2356789999999999888765    


Q ss_pred             -CCCcEEEEcccccCc----C----CCCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCC
Q 022471          144 -NAFDAVMHFAAVAYV----G----ESTLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (296)
Q Consensus       144 -~~~D~vi~~Ag~~~~----~----~~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e  210 (296)
                       +++|++|||||....    .    ...++.++.+++|+.+...    +++.|++  .++||++||....          
T Consensus        86 ~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~~----------  153 (258)
T PRK07533         86 WGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGAE----------  153 (258)
T ss_pred             cCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEeccccc----------
Confidence             689999999997532    1    1234456678899999555    4455532  3689999996543          


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       211 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                       .+.+....|+.||++.+.+++.++.|   +||++++|+||.|..+.
T Consensus       154 -~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~  199 (258)
T PRK07533        154 -KVVENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRA  199 (258)
T ss_pred             -cCCccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChh
Confidence             22334678999999999999999987   68999999999997764

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.92  E-value=1.6e-23  Score=182.56  Aligned_cols=174  Identities=16%  Similarity=0.129  Sum_probs=133.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |++|||||+|+||+++++.|+++|++|++++|+..+.+...+.+..   .+.++.++.+|++|.+++++++++     ++
T Consensus        13 k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~---~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~   89 (259)
T PRK08213         13 KTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEA---LGIDALWIAADVADEADIERLAEETLERFGH   89 (259)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh---cCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            8999999999999999999999999999999865443333333322   235678899999999999777654     57


Q ss_pred             CcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARH-----GVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~-----~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      +|+||||||......    ..+...+.++.|+.++..+++++.+.     +.++||++||...+.....       ...+
T Consensus        90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~-------~~~~  162 (259)
T PRK08213         90 VDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPP-------EVMD  162 (259)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCc-------cccC
Confidence            999999999754332    22334557789999999988876543     5679999999766532211       1134


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..+|+.+|++.+.+++.++++   +|+++++++||.+-++.
T Consensus       163 ~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~  203 (259)
T PRK08213        163 TIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKM  203 (259)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcc
Confidence            578999999999999999887   58999999999987764

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.8e-23  Score=181.69  Aligned_cols=170  Identities=19%  Similarity=0.172  Sum_probs=130.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEE-ecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc------
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIV-DNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------  143 (296)
                      ++++||||+||||++++++|+++|++|+++ .|+..+   ..+........+.++.++.+|++|.+++.+++++      
T Consensus         7 ~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~---~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~   83 (254)
T PRK12746          7 KVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQA---ADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ   83 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHH---HHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence            899999999999999999999999999875 443322   2222222222235688899999999999888764      


Q ss_pred             -----CCCcEEEEcccccCcCCCCcC----hHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCC
Q 022471          144 -----NAFDAVMHFAAVAYVGESTLD----PLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEET  212 (296)
Q Consensus       144 -----~~~D~vi~~Ag~~~~~~~~~~----~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~  212 (296)
                           .++|+||||||........+.    ....+++|+.++.++++.+.+.  ..+++|++||..++.           
T Consensus        84 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~-----------  152 (254)
T PRK12746         84 IRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRL-----------  152 (254)
T ss_pred             cccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcC-----------
Confidence                 369999999997654433332    2446679999998888877652  346899999987762           


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       213 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +.++.+.|+.||++.+.+++.++.+   .++++++++||.+++|.
T Consensus       153 ~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~  197 (254)
T PRK12746        153 GFTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDI  197 (254)
T ss_pred             CCCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcc
Confidence            3345678999999999999999876   68999999999999875

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.92  E-value=7.8e-24  Score=184.05  Aligned_cols=173  Identities=12%  Similarity=0.144  Sum_probs=131.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||++++++|+++|++|++++|+..+.++..+.++.   .+.++.++.+|++|.+++++++++     +
T Consensus         9 ~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   85 (253)
T PRK05867          9 GKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGT---SGGKVVPVCCDVSQHQQVTSMLDQVTAELG   85 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh---cCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            38999999999999999999999999999999865444444333332   235678899999999999888764     6


Q ss_pred             CCcEEEEcccccCcCCC----CcChHHHHHHHHHHHHHHHHH----HHHcC-CCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGES----TLDPLKYYHNITSNTLVVLES----MARHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~----~~~~~~~~~~n~~~t~~ll~~----~~~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||.....+.    .+..++.+++|+.++..++++    |.+.+ .++||++||....-.         ....
T Consensus        86 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~---------~~~~  156 (253)
T PRK05867         86 GIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHII---------NVPQ  156 (253)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCC---------CCCC
Confidence            89999999997654332    233445678999986665544    44443 358999998654310         0112


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ....|+.||++.+.+++.++.+   +||++++++||.|-++.
T Consensus       157 ~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~  198 (253)
T PRK05867        157 QVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTEL  198 (253)
T ss_pred             CccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcc
Confidence            3468999999999999999987   68999999999998774

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.92  E-value=9.5e-24  Score=182.88  Aligned_cols=168  Identities=18%  Similarity=0.174  Sum_probs=132.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+++||||+||||++++++|+++|++|++++|+.....+..+.+.+   .+.++.++.+|++|.+++++++++     ++
T Consensus         7 k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (250)
T PRK07774          7 KVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVA---DGGTAIAVQVDVSDPDSAKAMADATVSAFGG   83 (250)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            8999999999999999999999999999999865443333333332   134678899999999998887764     57


Q ss_pred             CcEEEEcccccCc-------CCCCcChHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYV-------GESTLDPLKYYHNITSNTLVVLESMA----RHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       146 ~D~vi~~Ag~~~~-------~~~~~~~~~~~~~n~~~t~~ll~~~~----~~~~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                      +|+||||||....       ....+..++.+++|+.++.++++++.    +.+.++||++||...|.             
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-------------  150 (250)
T PRK07774         84 IDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL-------------  150 (250)
T ss_pred             CCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC-------------
Confidence            9999999997532       11233445678899999777666554    44567999999987652             


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                       +.++|+.||++.+.+++.++++   .|+++++++||.+.++..
T Consensus       151 -~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~  193 (250)
T PRK07774        151 -YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEAT  193 (250)
T ss_pred             -CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccc
Confidence             3568999999999999999887   589999999999988764

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.9e-23  Score=183.86  Aligned_cols=170  Identities=15%  Similarity=0.188  Sum_probs=131.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+++||||+|+||++++++|+++|++|++++|+.....+..+.+..   .+.++.++.+|++|.+++.+++++     +
T Consensus        10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (274)
T PRK07775         10 RRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRA---DGGEAVAFPLDVTDPDSVKSFVAQAEEALG   86 (274)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            48999999999999999999999999999998764433322222222   235688899999999999888864     5


Q ss_pred             CCcEEEEcccccCcCCCC----cChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~~----~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||........    +.....+++|+.++.++++.+    .+.+.++||++||...+.           +.++
T Consensus        87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~-----------~~~~  155 (274)
T PRK07775         87 EIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALR-----------QRPH  155 (274)
T ss_pred             CCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcC-----------CCCC
Confidence            799999999975443322    334456789999977766554    455567899999987763           2234


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGS  253 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp  253 (296)
                      .+.|+.+|++.+.+++.++.+   .|+++++++||.+.++
T Consensus       156 ~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~  195 (274)
T PRK07775        156 MGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTG  195 (274)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCc
Confidence            678999999999999999876   4999999999988665

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.92  E-value=1.2e-23  Score=181.98  Aligned_cols=173  Identities=17%  Similarity=0.152  Sum_probs=136.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+|+||||+|+||++++++|+++|++|++++|+..+.....+.+..   .+.++.++.+|++|.+++++++++     +
T Consensus         6 ~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (251)
T PRK12826          6 GRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEA---AGGKARARQVDVRDRAALKAAVAAGVEDFG   82 (251)
T ss_pred             CCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            38999999999999999999999999999999875443333333322   234688999999999999988864     4


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||.....+    ..++....++.|+.++..+++.+    .+.+.++||++||...++          .+..+
T Consensus        83 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~----------~~~~~  152 (251)
T PRK12826         83 RLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPR----------VGYPG  152 (251)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhc----------cCCCC
Confidence            7999999999765422    33445567889999987776655    456678999999977651          12344


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      .+.|+.+|.+++.+++.++.+   .|+++++++||+++||..
T Consensus       153 ~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~  194 (251)
T PRK12826        153 LAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMA  194 (251)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchh
Confidence            678999999999999999876   689999999999999864

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.92  E-value=6.4e-24  Score=185.41  Aligned_cols=172  Identities=10%  Similarity=0.089  Sum_probs=128.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC-CcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR-GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      +|+++||||++|||++++++|+++|++|++++|+.. ..+...+.++..  .+.++.++++|++|.+++++++++     
T Consensus         8 ~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (260)
T PRK08416          8 GKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQK--YGIKAKAYPLNILEPETYKELFKKIDEDF   85 (260)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHh--cCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            389999999999999999999999999998865322 122222222221  134788999999999999988875     


Q ss_pred             CCCcEEEEcccccCc------CC----CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYV------GE----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPIT  209 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~------~~----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~  209 (296)
                      +++|+||||||....      .+    ..+.....+++|+.+    ++.+++.|++.+.++||++||...+         
T Consensus        86 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~---------  156 (260)
T PRK08416         86 DRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNL---------  156 (260)
T ss_pred             CCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccc---------
Confidence            679999999986421      11    122334466777776    4456666766666799999996543         


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          210 EETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       210 e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                        .+.+....|+.||++.+.+++.++.+   +|+++++|+||.+..+.
T Consensus       157 --~~~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~  202 (260)
T PRK08416        157 --VYIENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDA  202 (260)
T ss_pred             --cCCCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChh
Confidence              22334678999999999999999988   58999999999987764

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.92  E-value=1.2e-23  Score=182.34  Aligned_cols=167  Identities=20%  Similarity=0.207  Sum_probs=130.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+|+||||+|+||.++++.|+++|++|++++|++.+.+...   ...   +.++.++.+|++|.+++++++++     ++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~---~~~---~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~   74 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELK---DEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWRN   74 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHH---HHh---ccceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999999999999998653322221   111   24688899999999999887764     47


Q ss_pred             CcEEEEcccccCc-C----CCCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYV-G----ESTLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       146 ~D~vi~~Ag~~~~-~----~~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      +|+||||||.... .    ...+...+.+++|+.+    +..+++++++.+.++||++||...+           .+..+
T Consensus        75 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-----------~~~~~  143 (248)
T PRK10538         75 IDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGS-----------WPYAG  143 (248)
T ss_pred             CCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccC-----------CCCCC
Confidence            9999999997421 1    1334456678899999    4556666667777899999997654           23345


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      .+.|+.+|.+.+.+++.++.+   .++++++++||.+.|+.
T Consensus       144 ~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~  184 (248)
T PRK10538        144 GNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTE  184 (248)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccc
Confidence            678999999999999999876   68999999999998664

>PRK08264 short chain dehydrogenase; Validated

Probab=99.92  E-value=3.4e-23  Score=178.20  Aligned_cols=190  Identities=13%  Similarity=0.055  Sum_probs=146.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-CCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~  148 (296)
                      ++++||||+|+||++++++|+++|+ +|++++|+..+..+          .+.++.++.+|++|.++++++++. .++|+
T Consensus         7 ~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----------~~~~~~~~~~D~~~~~~~~~~~~~~~~id~   76 (238)
T PRK08264          7 KVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----------LGPRVVPLQLDVTDPASVAAAAEAASDVTI   76 (238)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----------cCCceEEEEecCCCHHHHHHHHHhcCCCCE
Confidence            8999999999999999999999999 99999986543221          135788999999999999998865 46999


Q ss_pred             EEEcccc-cCcCC----CCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCCh
Q 022471          149 VMHFAAV-AYVGE----STLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (296)
Q Consensus       149 vi~~Ag~-~~~~~----~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~  219 (296)
                      |||+||. .....    ..+.....+++|+.++..+++++    ++.+.+++|++||...+.           +..+...
T Consensus        77 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~-----------~~~~~~~  145 (238)
T PRK08264         77 LVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWV-----------NFPNLGT  145 (238)
T ss_pred             EEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcc-----------CCCCchH
Confidence            9999998 32222    23444557889999987777665    455677999999977652           3345678


Q ss_pred             HHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          220 YGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       220 Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      |+.+|.+++.+++.++.+   .++++++++||.+.++......+..     -....+...+++.+..+.+
T Consensus       146 y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~-----~~~~~~a~~~~~~~~~~~~  210 (238)
T PRK08264        146 YSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLDAPK-----ASPADVARQILDALEAGDE  210 (238)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccCCcCC-----CCHHHHHHHHHHHHhCCCC
Confidence            999999999999999876   5899999999999887533222221     1123688888888887765

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.2e-23  Score=183.92  Aligned_cols=171  Identities=16%  Similarity=0.121  Sum_probs=134.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||.+++++|+++|++|++++|+..+.++..+.++.   .+.++.++.+|+++.+++.+++++     +
T Consensus        10 ~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (263)
T PRK07814         10 DQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRA---AGRRAHVVAADLAHPEATAGLAGQAVEAFG   86 (263)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999999865444333333322   235688899999999999887764     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHH-----cCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMAR-----HGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~-----~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||......    ..+.....+++|+.++..+++++.+     .+.++||++||...+           .+..
T Consensus        87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~-----------~~~~  155 (263)
T PRK07814         87 RLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGR-----------LAGR  155 (263)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEcccccc-----------CCCC
Confidence            8999999999754332    2344566788999998888877753     456799999996543           2334


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc--CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN--SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~--~gi~~~~lrpg~v~Gp~  254 (296)
                      +.++|+.||.+++.+++.++.+  .+++++.++||.+.++.
T Consensus       156 ~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~  196 (263)
T PRK07814        156 GFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSA  196 (263)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCch
Confidence            5788999999999999999987  46899999999997763

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.92  E-value=2.1e-23  Score=181.45  Aligned_cols=169  Identities=12%  Similarity=0.137  Sum_probs=131.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+++||||+|+||++++++|+++|++|+++++..  ..+..+.+.+.   +.++.++++|++|.+++++++++     +
T Consensus        10 ~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~--~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (253)
T PRK08993         10 GKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVE--PTETIEQVTAL---GRRFLSLTADLRKIDGIPALLERAVAEFG   84 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcc--hHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            48999999999999999999999999999887632  23333333332   34678899999999999988865     6


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHH----HHHcC-CCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLES----MARHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~----~~~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|++|||||......    ..++.++.+++|+.++..++++    +++.+ .++||++||...+..           ..
T Consensus        85 ~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~  153 (253)
T PRK08993         85 HIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQG-----------GI  153 (253)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccC-----------CC
Confidence            8999999999754332    3345667888999996665544    44443 368999999877632           22


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ....|+.||++.+.+++.++.+   +|++++.++||.+..+.
T Consensus       154 ~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~  195 (253)
T PRK08993        154 RVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNN  195 (253)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcc
Confidence            3568999999999999999987   68999999999998864

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.92  E-value=1e-23  Score=182.54  Aligned_cols=171  Identities=14%  Similarity=0.121  Sum_probs=134.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+|+||++++++|+++|++|++++|+.....+..+.+.+.   +.++.++++|++|.++++++++.     +
T Consensus         3 ~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   79 (250)
T TIGR03206         3 DKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK---GGNAQAFACDITDRDSVDTAVAAAEQALG   79 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc---CCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            489999999999999999999999999999987654443333333322   35688999999999999888754     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||......    ..+.....+++|+.++..+++++    ++.+.+++|++||.+.+..           ...
T Consensus        80 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~-----------~~~  148 (250)
T TIGR03206        80 PVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVG-----------SSG  148 (250)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccC-----------CCC
Confidence            7999999999754322    22233456889999987765554    4566789999999877632           233


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.+|++.+.+++.++.+   .++++++++||.++++.
T Consensus       149 ~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~  189 (250)
T TIGR03206       149 EAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTAL  189 (250)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchh
Confidence            678999999999999999887   48999999999999885

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.1e-23  Score=182.93  Aligned_cols=169  Identities=15%  Similarity=0.182  Sum_probs=131.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+++||||+||||++++++|+++|++|++++|+..+.++..+.+.+.   +.++.++++|++|.+++++++++     ++
T Consensus         2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (252)
T PRK07677          2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF---PGQVLTVQMDVRNPEDVQKMVEQIDEKFGR   78 (252)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            89999999999999999999999999999998754444443333322   35788999999999999887765     57


Q ss_pred             CcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHH----HcC-CCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMA----RHG-VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~----~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      +|+||||||......    ..+.++..+++|+.++.++++++.    +.+ .++||++||...+           .+...
T Consensus        79 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~-----------~~~~~  147 (252)
T PRK07677         79 IDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAW-----------DAGPG  147 (252)
T ss_pred             ccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhc-----------cCCCC
Confidence            999999999643322    333446678999999777766663    333 4689999997654           12234


Q ss_pred             CChHHHHHHHHHHHHHHhhhc----CCCcEEEEecCeeecC
Q 022471          217 INPYGKAKKMAEDIILDFSKN----SDMAVMILRYFNVIGS  253 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~----~gi~~~~lrpg~v~Gp  253 (296)
                      ..+|+.||++.+.+++.++.+    +|++++.++||.+.++
T Consensus       148 ~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~  188 (252)
T PRK07677        148 VIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERT  188 (252)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccc
Confidence            568999999999999998877    4899999999999864

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.3e-23  Score=183.28  Aligned_cols=169  Identities=16%  Similarity=0.111  Sum_probs=131.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc------
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------  143 (296)
                      ||++|||||+||||++++++|+++|++|++++|+....++..+.+    . +.++.++++|++|.+++.++++.      
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   75 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAEL----G-AGNAWTGALDVTDRAAWDAALADFAAATG   75 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh----c-CCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            588999999999999999999999999999997654333222221    1 35788999999999999887753      


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +++|+||||||......    ..++.+..+++|+.++..+++++    ++.+.++||++||...+.           +..
T Consensus        76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~  144 (260)
T PRK08267         76 GRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIY-----------GQP  144 (260)
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCc-----------CCC
Confidence            57899999999865433    22345667889999977765554    455668999999975431           122


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ....|+.||++.+.++++++.+   .++++++++||.+..+.
T Consensus       145 ~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~  186 (260)
T PRK08267        145 GLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAM  186 (260)
T ss_pred             CchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcc
Confidence            3678999999999999999866   68999999999997754

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.92  E-value=2e-23  Score=181.65  Aligned_cols=171  Identities=13%  Similarity=0.141  Sum_probs=134.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+|+||||+|+||++++++|+++|++|++++|+....+...+.++..   +.++.++.+|++|.++++++++.     +
T Consensus        11 ~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   87 (255)
T PRK06113         11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL---GGQAFACRCDITSEQELSALADFALSKLG   87 (255)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            499999999999999999999999999999987655444333333322   35688899999999999887654     6


Q ss_pred             CCcEEEEcccccCcCCC---CcChHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGES---TLDPLKYYHNITSNTLVVLESMA----RHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~---~~~~~~~~~~n~~~t~~ll~~~~----~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      ++|+||||||.......   .+..+..+++|+.++..+++++.    +.+.++||++||....           .+..+.
T Consensus        88 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-----------~~~~~~  156 (255)
T PRK06113         88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAE-----------NKNINM  156 (255)
T ss_pred             CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEeccccc-----------CCCCCc
Confidence            79999999997543322   23445568899999877776664    4455699999997654           234456


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..|+.||++.+.+++.++.+   .|++++++.||.+..+.
T Consensus       157 ~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~  196 (255)
T PRK06113        157 TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDA  196 (255)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccc
Confidence            78999999999999999876   68999999999998764

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=2.8e-23  Score=179.15  Aligned_cols=173  Identities=17%  Similarity=0.118  Sum_probs=133.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcc-hhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNI-GAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      +|+||||||+|+||++++++|+++|++|+++.|+..... ...+.+.   ..+.++.++.+|++|.+++.+++++     
T Consensus         6 ~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (249)
T PRK12825          6 GRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVE---ALGRRAQAVQADVTDKAALEAAVAAAVERF   82 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHH---hcCCceEEEECCcCCHHHHHHHHHHHHHHc
Confidence            479999999999999999999999999988776433211 1111222   1235688999999999999888754     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +++|+||||||......    ..+...+.++.|+.++.++++.+    ++.+.+++|++||...+.           +..
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~-----------~~~  151 (249)
T PRK12825         83 GRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLP-----------GWP  151 (249)
T ss_pred             CCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCC-----------CCC
Confidence            57999999999754433    23344567889999987776665    566778999999987652           223


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~~  256 (296)
                      +...|+.+|.+.+.+++.++.+   .|++++++|||.++|+...
T Consensus       152 ~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~  195 (249)
T PRK12825        152 GRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKE  195 (249)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccc
Confidence            4678999999999999998876   6999999999999998743

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.91  E-value=1.6e-23  Score=182.14  Aligned_cols=167  Identities=16%  Similarity=0.098  Sum_probs=126.9

Q ss_pred             cEEEEEcCC--ChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           71 THVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        71 k~vlVTGas--G~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      |+++||||+  +|||++++++|+++|++|++.+|+.    +..+.+++..  ..++.++++|++|.+++++++++     
T Consensus         8 k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~----~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (252)
T PRK06079          8 KKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND----RMKKSLQKLV--DEEDLLVECDVASDESIERAFATIKERV   81 (252)
T ss_pred             CEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch----HHHHHHHhhc--cCceeEEeCCCCCHHHHHHHHHHHHHHh
Confidence            899999999  8999999999999999999998752    2223333332  23578899999999999887765     


Q ss_pred             CCCcEEEEcccccCc----CC----CCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYV----GE----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETP  213 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~----~~----~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~~  213 (296)
                      +++|+||||||....    .+    ..++.+..+++|+.+...+.+++.+.  ..++||++||.+..           .+
T Consensus        82 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~-----------~~  150 (252)
T PRK06079         82 GKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSE-----------RA  150 (252)
T ss_pred             CCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCcc-----------cc
Confidence            689999999997532    11    22334556778888865544444321  13689999996543           22


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       214 ~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      .+....|+.||++.+.+++.++.|   +||++++|.||.|-.+.
T Consensus       151 ~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~  194 (252)
T PRK06079        151 IPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLA  194 (252)
T ss_pred             CCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccc
Confidence            344678999999999999999987   68999999999998764

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=1.6e-23  Score=182.10  Aligned_cols=172  Identities=17%  Similarity=0.119  Sum_probs=131.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+++||||+||||++++++|+++|++|++++|+....  ..+..+.....+.++.++.+|++|.+++.+++++     ++
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEE--LAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGR   80 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhH--HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            7899999999999999999999999999998754321  1122222212235788999999999998887764     57


Q ss_pred             CcEEEEcccccCcC------CCCcChHHHHHHHHHHHHHHHHHHHH----cC------CCEEEEEcccccccCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVG------ESTLDPLKYYHNITSNTLVVLESMAR----HG------VDTLIYSSTCATYGEPEKMPIT  209 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~------~~~~~~~~~~~~n~~~t~~ll~~~~~----~~------~~riV~~SS~~~~g~~~~~~~~  209 (296)
                      +|+||||||.....      ...+...+.+++|+.++.++++++.+    ..      .++||++||...+.        
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--------  152 (256)
T PRK12745         81 IDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIM--------  152 (256)
T ss_pred             CCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhcc--------
Confidence            99999999975321      12344566788999998887666543    22      45799999977642        


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          210 EETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       210 e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                         +..+.+.|+.||++.+.+++.++.+   +|+++++++||.++++..
T Consensus       153 ---~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~  198 (256)
T PRK12745        153 ---VSPNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMT  198 (256)
T ss_pred             ---CCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccc
Confidence               2334678999999999999999876   789999999999998753

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.91  E-value=2.2e-23  Score=181.41  Aligned_cols=172  Identities=16%  Similarity=0.125  Sum_probs=135.4

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|+++||||+|+||++++++|+++|++|++++|+.....+..+.+++   .+.++.++.+|++|.+++.+++++     
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRA---AGGAAEALAFDIADEEAVAAAFARIDAEH   86 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHh---cCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            349999999999999999999999999999999865443333333332   235688999999999999887764     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHH----HHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVL----ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll----~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +++|+||||||......    ..++.++.+++|+.++..+.    +.+.+.+.++||++||...+           .+.+
T Consensus        87 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~-----------~~~~  155 (256)
T PRK06124         87 GRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQ-----------VARA  155 (256)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhc-----------cCCC
Confidence            57999999999754332    22344557889999877766    55555677899999997654           2233


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...+|+.+|.+.+.+++.++.+   .++++++|+||.+.++.
T Consensus       156 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~  197 (256)
T PRK06124        156 GDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATET  197 (256)
T ss_pred             CccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcc
Confidence            4678999999999999999877   58999999999999985

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.3e-23  Score=181.88  Aligned_cols=166  Identities=19%  Similarity=0.181  Sum_probs=129.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+++||||+|+||++++++|+++|++|++++|+....   .+..++.   +.++.++++|++|.+++.++++.     ++
T Consensus         7 k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~---~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (249)
T PRK06500          7 KTALITGGTSGIGLETARQFLAEGARVAITGRDPASL---EAARAEL---GESALVIRADAGDVAAQKALAQALAEAFGR   80 (249)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHH---HHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            8999999999999999999999999999998754222   2222222   34678899999999888776653     57


Q ss_pred             CcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEccccc-ccCCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCAT-YGEPEKMPITEETPQAPIN  218 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~-~g~~~~~~~~e~~~~~~~~  218 (296)
                      +|+||||||......    ..+.++..+++|+.++..+++++.+.  ..+++|++||... |+            .+..+
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~------------~~~~~  148 (249)
T PRK06500         81 LDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIG------------MPNSS  148 (249)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccC------------CCCcc
Confidence            999999999754332    33455668899999999988888742  3357888777543 32            23467


Q ss_pred             hHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          219 PYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       219 ~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +|+.+|++.+.+++.++.+   .|+++++++||.+++|.
T Consensus       149 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~  187 (249)
T PRK06500        149 VYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPL  187 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHH
Confidence            8999999999999999876   58999999999999984

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.3e-23  Score=185.97  Aligned_cols=177  Identities=12%  Similarity=0.008  Sum_probs=128.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-------cchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhh
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG-------NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS  142 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~  142 (296)
                      +|+++||||++|||++++++|+++|++|++++|+...       .+...+..+.+...+.++.++++|++|.++++++++
T Consensus         8 ~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~   87 (305)
T PRK08303          8 GKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVE   87 (305)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence            3899999999999999999999999999999987432       112222222222223467889999999999998886


Q ss_pred             c-----CCCcEEEEcc-cccC----cCCC----CcChHHHHHHHHHHH----HHHHHHHHHcCCCEEEEEcccccccCCC
Q 022471          143 E-----NAFDAVMHFA-AVAY----VGES----TLDPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPE  204 (296)
Q Consensus       143 ~-----~~~D~vi~~A-g~~~----~~~~----~~~~~~~~~~n~~~t----~~ll~~~~~~~~~riV~~SS~~~~g~~~  204 (296)
                      +     +++|++|||| |...    ..+.    .+...+.+++|+.++    +.+++.|++.+.++||++||....... 
T Consensus        88 ~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~-  166 (305)
T PRK08303         88 RIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNA-  166 (305)
T ss_pred             HHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccC-
Confidence            5     6899999999 7421    1111    223345677888874    446666766656799999995432100 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          205 KMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       205 ~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                             .+......|+.||++...+++.++.|   .||++++|.||.|-.+.
T Consensus       167 -------~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~  212 (305)
T PRK08303        167 -------THYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEM  212 (305)
T ss_pred             -------cCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHH
Confidence                   11223567999999999999999988   68999999999997663

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.9e-23  Score=185.11  Aligned_cols=171  Identities=18%  Similarity=0.125  Sum_probs=128.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC------CcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR------GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~  143 (296)
                      +|+++||||++|||++++++|+++|++|++++++.+      ..+...+..+++...+.++.++.+|++|.+++++++++
T Consensus         6 ~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~   85 (286)
T PRK07791          6 GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVDA   85 (286)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHH
Confidence            389999999999999999999999999999987541      11222222333322345678899999999998887765


Q ss_pred             -----CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHH----HHHHHcC------CCEEEEEcccccccCCC
Q 022471          144 -----NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVL----ESMARHG------VDTLIYSSTCATYGEPE  204 (296)
Q Consensus       144 -----~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll----~~~~~~~------~~riV~~SS~~~~g~~~  204 (296)
                           +++|+||||||+.....    ..+..+..+++|+.++..+.    +.|++..      .++||++||.+.+    
T Consensus        86 ~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~----  161 (286)
T PRK07791         86 AVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGL----  161 (286)
T ss_pred             HHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhC----
Confidence                 68999999999854332    33445667889999965554    4444432      2589999997654    


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeec
Q 022471          205 KMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIG  252 (296)
Q Consensus       205 ~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~G  252 (296)
                             .+.+....|+.||++.+.+++.++.|   +||++++|+|| +..
T Consensus       162 -------~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T  204 (286)
T PRK07791        162 -------QGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ART  204 (286)
T ss_pred             -------cCCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCC
Confidence                   23344678999999999999999987   79999999998 543

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.91  E-value=1e-23  Score=184.34  Aligned_cols=168  Identities=13%  Similarity=0.041  Sum_probs=124.2

Q ss_pred             cEEEEEcC--CChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           71 THVLVTGG--AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        71 k~vlVTGa--sG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      |+++||||  ++|||+++|++|+++|++|++.+|+.+. .+..+.+..   .......+++|++|.+++++++++     
T Consensus         7 k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (261)
T PRK08690          7 KKILITGMISERSIAYGIAKACREQGAELAFTYVVDKL-EERVRKMAA---ELDSELVFRCDVASDDEINQVFADLGKHW   82 (261)
T ss_pred             cEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHH-HHHHHHHHh---ccCCceEEECCCCCHHHHHHHHHHHHHHh
Confidence            89999997  6799999999999999999998765322 222222221   113346789999999999988865     


Q ss_pred             CCCcEEEEcccccCcC----C-----CCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVG----E-----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~----~-----~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e  210 (296)
                      +++|++|||||+....    .     ..+.....+++|+.+...    +++.|++.+ ++||++||.+.+          
T Consensus        83 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~-g~Iv~iss~~~~----------  151 (261)
T PRK08690         83 DGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRN-SAIVALSYLGAV----------  151 (261)
T ss_pred             CCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcC-cEEEEEcccccc----------
Confidence            6899999999985431    1     112233456778877544    455555443 689999997654          


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       211 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                       .+.+....|+.||++.+.+++.++.+   +||++++|.||.|-.+.
T Consensus       152 -~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~  197 (261)
T PRK08690        152 -RAIPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLA  197 (261)
T ss_pred             -cCCCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchh
Confidence             23345678999999999999999876   78999999999998764

>PRK09135 pteridine reductase; Provisional

Probab=99.91  E-value=4.7e-23  Score=178.14  Aligned_cols=173  Identities=20%  Similarity=0.216  Sum_probs=132.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-cchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG-NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      ++||||||+||||++++++|+++|++|++++|+... .+...+.+....  +..+.++.+|++|.+++.++++.     +
T Consensus         7 ~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (249)
T PRK09135          7 KVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALR--PGSAAALQADLLDPDALPELVAACVAAFG   84 (249)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc--CCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            789999999999999999999999999999975432 222222222211  24578899999999999988865     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHHc---CCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARH---GVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~---~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      ++|+||||||......    ..+..+..+++|+.++.++++++.+.   ..+.+++++|...           ..+.++.
T Consensus        85 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~  153 (249)
T PRK09135         85 RLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHA-----------ERPLKGY  153 (249)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhh-----------cCCCCCc
Confidence            7999999999754332    22345668889999999999888642   2356777766332           2456678


Q ss_pred             ChHHHHHHHHHHHHHHhhhc--CCCcEEEEecCeeecCCCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN--SDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~--~gi~~~~lrpg~v~Gp~~~  256 (296)
                      .+|+.||++++.+++.++.+  .++++++++||.++||...
T Consensus       154 ~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~  194 (249)
T PRK09135        154 PVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDG  194 (249)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCcccc
Confidence            89999999999999999987  4699999999999999753

>PRK12743 oxidoreductase; Provisional

Probab=99.91  E-value=2.1e-23  Score=181.70  Aligned_cols=170  Identities=15%  Similarity=0.136  Sum_probs=131.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC-CcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR-GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      |+|+||||+|+||++++++|+++|++|++++++.. ..++..+.++.   .+.+++++.+|++|.+++++++++     +
T Consensus         3 k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12743          3 QVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRS---HGVRAEIRQLDLSDLPEGAQALDKLIQRLG   79 (256)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHh---cCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            79999999999999999999999999998875432 22222233322   245788999999999998887765     6


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHH----HcC-CCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMA----RHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~----~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||......    ..+...+.+++|+.++..+++++.    +.+ .++||++||....           .+..
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~-----------~~~~  148 (256)
T PRK12743         80 RIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH-----------TPLP  148 (256)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc-----------CCCC
Confidence            7999999999754332    234455678899999777766554    332 3699999996432           3455


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.+|++.+.++++++.+   +|++++.|+||.+++|.
T Consensus       149 ~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~  190 (256)
T PRK12743        149 GASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPM  190 (256)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcc
Confidence            6789999999999999999886   68999999999999875

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.5e-23  Score=186.60  Aligned_cols=169  Identities=18%  Similarity=0.114  Sum_probs=131.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+++||||+||||++++++|+++|++|++++|+....++..+   ++. .+..+..+.+|++|.+++++++++     +
T Consensus         9 gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~---~l~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   84 (296)
T PRK05872          9 GKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAA---ELG-GDDRVLTVVADVTDLAAMQAAAEEAVERFG   84 (296)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---Hhc-CCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999976543332222   221 234567778999999999888765     6


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||+.....    ..+..++.+++|+.++..+++.+    .+. .++||++||.+.+.           +.+.
T Consensus        85 ~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~-----------~~~~  152 (296)
T PRK05872         85 GIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFA-----------AAPG  152 (296)
T ss_pred             CCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcC-----------CCCC
Confidence            7999999999865433    22334567889999977766555    343 36999999987762           3344


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.||++.+.+++.++.+   .|+++++++||.+.++.
T Consensus       153 ~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  193 (296)
T PRK05872        153 MAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDL  193 (296)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchh
Confidence            678999999999999999876   79999999999998764

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.91  E-value=4.6e-23  Score=178.22  Aligned_cols=171  Identities=18%  Similarity=0.155  Sum_probs=130.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+++||||+|+||++++++|+++|++|++..+..  .....+.+++....+.++..+.+|++|.+++.+++++     ++
T Consensus         4 k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK12938          4 RIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPN--SPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE   81 (246)
T ss_pred             CEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCC--hHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            8999999999999999999999999998864321  1122222332222235677889999999999888764     67


Q ss_pred             CcEEEEcccccCcCC----CCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +|+||||||......    ..++.++.+++|+.++..    +++.+++.+.++||++||....           .+..+.
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-----------~~~~~~  150 (246)
T PRK12938         82 IDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQ-----------KGQFGQ  150 (246)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhcc-----------CCCCCC
Confidence            999999999754322    334456678899998444    6666666777899999996543           223456


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..|+.+|.+.+.+++.++.+   .|+++++++||.+.+|.
T Consensus       151 ~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~  190 (246)
T PRK12938        151 TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDM  190 (246)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCch
Confidence            78999999999999999876   68999999999999875

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.1e-23  Score=183.55  Aligned_cols=172  Identities=21%  Similarity=0.187  Sum_probs=132.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |++|||||+|+||++++++|+++|++|++++|+........+.+..... ..++.++.+|++|.+++.+++++     ++
T Consensus         8 k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   86 (276)
T PRK05875          8 RTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKG-AGAVRYEPADVTDEDQVARAVDAATAWHGR   86 (276)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccC-CCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            8999999999999999999999999999999865443333333332211 24688899999999999888764     47


Q ss_pred             CcEEEEcccccCc-C----CCCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYV-G----ESTLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       146 ~D~vi~~Ag~~~~-~----~~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      +|+||||||.... .    ...++....+++|+.++..+++++    .+.+.++||++||...+           .+.++
T Consensus        87 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~-----------~~~~~  155 (276)
T PRK05875         87 LHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAAS-----------NTHRW  155 (276)
T ss_pred             CCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhc-----------CCCCC
Confidence            9999999996432 1    122334567888999977766544    44455799999998765           22345


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      .++|+.+|++.+.+++.++.+   .++++++++||.+.++.
T Consensus       156 ~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~  196 (276)
T PRK05875        156 FGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDL  196 (276)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcc
Confidence            689999999999999999877   57999999999998764

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.7e-23  Score=184.06  Aligned_cols=165  Identities=13%  Similarity=0.112  Sum_probs=127.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      ||+++||||+||||++++++|+++|++|++++|+..+.+    .+..     .++.++.+|++|.++++++++.     +
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~----~~~~-----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   71 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVE----ALAA-----AGFTAVQLDVNDGAALARLAEELEAEHG   71 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHH-----CCCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            589999999999999999999999999999997643221    1111     2467889999999999887754     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHH---cCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMAR---HGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~---~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      ++|+||||||......    ..++....+++|+.++..+++++.+   .+.++||++||...+.           +.+..
T Consensus        72 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~  140 (274)
T PRK05693         72 GLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVL-----------VTPFA  140 (274)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccC-----------CCCCc
Confidence            7999999999754433    2334556788999997666655532   2347899999976542           22346


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      .+|+.||.+.+.++++++.+   +|+++++++||.|.++.
T Consensus       141 ~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~  180 (274)
T PRK05693        141 GAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQF  180 (274)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCcccccc
Confidence            78999999999999999876   79999999999998764

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.91  E-value=4e-23  Score=178.71  Aligned_cols=172  Identities=17%  Similarity=0.114  Sum_probs=132.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +++++||||+|+||++++++|+++|++|++..++..  ....+..+.+...+.++.++.+|++|.+++.+++++     +
T Consensus         6 ~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK12935          6 GKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSK--EAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG   83 (247)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcH--HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999987654321  222222222222235788999999999999888876     6


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMA----RHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~----~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||......    ..+..++.+++|+.++..+++++.    +.+.++||++||...+.           +..+
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~  152 (247)
T PRK12935         84 KVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQA-----------GGFG  152 (247)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcC-----------CCCC
Confidence            7999999999854432    224556678999999877766665    34567999999976542           2234


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.||.+.+.+++.++.+   .++++++++||.|.++.
T Consensus       153 ~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~  193 (247)
T PRK12935        153 QTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEM  193 (247)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChh
Confidence            678999999999999999877   59999999999998764

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2e-23  Score=181.55  Aligned_cols=168  Identities=16%  Similarity=0.131  Sum_probs=128.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |++|||||+|+||++++++|+++|++|++++|+.....+..+....   .+.++.++.+|++|.+++++++. .++|+||
T Consensus         3 ~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~-~~id~vi   78 (257)
T PRK09291          3 KTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAAR---RGLALRVEKLDLTDAIDRAQAAE-WDVDVLL   78 (257)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCcceEEEeeCCCHHHHHHHhc-CCCCEEE
Confidence            7899999999999999999999999999999865433333222222   13468889999999999998875 3899999


Q ss_pred             EcccccCcCCCC----cChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHH
Q 022471          151 HFAAVAYVGEST----LDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGK  222 (296)
Q Consensus       151 ~~Ag~~~~~~~~----~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~  222 (296)
                      ||||.....+..    +.....+++|+.++..    +++.+++.+.++||++||...+.           ..+....|+.
T Consensus        79 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~-----------~~~~~~~Y~~  147 (257)
T PRK09291         79 NNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLI-----------TGPFTGAYCA  147 (257)
T ss_pred             ECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhcc-----------CCCCcchhHH
Confidence            999976543322    2334567788888544    55666677778999999976541           1234678999


Q ss_pred             HHHHHHHHHHHhhhc---CCCcEEEEecCeeecC
Q 022471          223 AKKMAEDIILDFSKN---SDMAVMILRYFNVIGS  253 (296)
Q Consensus       223 sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp  253 (296)
                      ||.+.+.+++.++.+   .|+++++|+||.+..+
T Consensus       148 sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~  181 (257)
T PRK09291        148 SKHALEAIAEAMHAELKPFGIQVATVNPGPYLTG  181 (257)
T ss_pred             HHHHHHHHHHHHHHHHHhcCcEEEEEecCccccc
Confidence            999999999998876   6999999999987543

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.91  E-value=7.2e-23  Score=178.88  Aligned_cols=173  Identities=18%  Similarity=0.139  Sum_probs=132.9

Q ss_pred             ccEEEEEcCCC-hhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           70 VTHVLVTGGAG-YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG-~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      +|+++||||+| |||+++++.|+++|++|++++|+..+.++..+.+++..+ ..++.++++|+++.+++++++++     
T Consensus        17 ~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   95 (262)
T PRK07831         17 GKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELG-LGRVEAVVCDVTSEAQVDALIDAAVERL   95 (262)
T ss_pred             CCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcC-CceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            48999999996 899999999999999999998866554444444433221 14688899999999999888764     


Q ss_pred             CCCcEEEEcccccCcCCC----CcChHHHHHHHHHHHHHHH----HHHHHcC-CCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGES----TLDPLKYYHNITSNTLVVL----ESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~~----~~~~~~~~~~n~~~t~~ll----~~~~~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                      +++|+||||||.......    .+...+.+++|+.++..++    +.+++.+ .++||++||...+           .+.
T Consensus        96 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~-----------~~~  164 (262)
T PRK07831         96 GRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGW-----------RAQ  164 (262)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhc-----------CCC
Confidence            589999999997543332    2334556778988866544    4455554 5789999986654           233


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      .+...|+.+|++.+.+++.++.+   +||++++|+||.++.|.
T Consensus       165 ~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~  207 (262)
T PRK07831        165 HGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPF  207 (262)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcc
Confidence            45678999999999999999987   78999999999999885

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.91  E-value=2.8e-23  Score=180.25  Aligned_cols=171  Identities=18%  Similarity=0.164  Sum_probs=132.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+|+||++++++|+++|++|++++|+....+.+.+.+..   .+.++.++.+|++|.+++.+++++     .
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATD---AGGSVIYLVADVTKEDEIADMIAAAAAEFG   77 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            37899999999999999999999999999999875444443333322   235688899999999988776654     5


Q ss_pred             CCcEEEEcccccCcCCC----CcChHHHHHHHHHHHHHHHHH----HHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGES----TLDPLKYYHNITSNTLVVLES----MARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~----~~~~~~~~~~n~~~t~~ll~~----~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||.......    .++.++.++.|+.++..+++.    +++.+.+++|++||...+..           .+.
T Consensus        78 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~-----------~~~  146 (255)
T TIGR01963        78 GLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVA-----------SPF  146 (255)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCC-----------CCC
Confidence            69999999997654322    223345677899986665554    46677789999999766522           233


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.+|.+.+.+++.++.+   .++++++++||.+++|.
T Consensus       147 ~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~  187 (255)
T TIGR01963       147 KSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPL  187 (255)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHH
Confidence            578999999999999998876   58999999999999985

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.91  E-value=4.4e-23  Score=180.11  Aligned_cols=171  Identities=15%  Similarity=0.129  Sum_probs=131.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-cchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG-NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      +|+++||||+|+||++++++|+++|++|++++|+... .....+.++.   .+.++.++.+|++|.+++.++++.     
T Consensus         7 ~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~---~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~   83 (261)
T PRK08936          7 GKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKK---AGGEAIAVKGDVTVESDVVNLIQTAVKEF   83 (261)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHH---cCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3899999999999999999999999999988774322 2222222222   235678899999999998887754     


Q ss_pred             CCCcEEEEcccccCcCCC----CcChHHHHHHHHHHHH----HHHHHHHHcC-CCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGES----TLDPLKYYHNITSNTL----VVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~~----~~~~~~~~~~n~~~t~----~ll~~~~~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                      +++|+||||||.......    .+..++.+++|+.++.    .+++.|++.+ .++||++||...+           .+.
T Consensus        84 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~-----------~~~  152 (261)
T PRK08936         84 GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQ-----------IPW  152 (261)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccc-----------CCC
Confidence            579999999997544332    2344557889988754    5667777665 4699999996543           344


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ++..+|+.+|++.+.+++.++.+   .|+++++|+||.|.++.
T Consensus       153 ~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~  195 (261)
T PRK08936        153 PLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPI  195 (261)
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCc
Confidence            56789999999999999999877   58999999999998885

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.91  E-value=2e-23  Score=182.25  Aligned_cols=171  Identities=17%  Similarity=0.086  Sum_probs=127.4

Q ss_pred             ccEEEEEcCC--ChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----
Q 022471           70 VTHVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (296)
Q Consensus        70 ~k~vlVTGas--G~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (296)
                      +|+++||||+  +|||++++++|+++|++|++.+|+.... +..+.++++.....++.++++|++|.+++++++++    
T Consensus         6 ~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (258)
T PRK07370          6 GKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKG-RFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK   84 (258)
T ss_pred             CcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccc-hHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence            3899999986  8999999999999999999887653211 12222222222223567889999999999888765    


Q ss_pred             -CCCcEEEEcccccCc----CC----CCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCC
Q 022471          144 -NAFDAVMHFAAVAYV----GE----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (296)
Q Consensus       144 -~~~D~vi~~Ag~~~~----~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e  210 (296)
                       +++|++|||||....    .+    ..+..++.+++|+.++..    +++.|++  .++||++||....          
T Consensus        85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~----------  152 (258)
T PRK07370         85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGV----------  152 (258)
T ss_pred             cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccc----------
Confidence             689999999997532    12    223445677889988555    4555544  2699999996543          


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       211 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                       .+.+....|+.||++.+.+++.++.|   +||++++|.||.|..+.
T Consensus       153 -~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~  198 (258)
T PRK07370        153 -RAIPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLA  198 (258)
T ss_pred             -cCCcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCch
Confidence             23345678999999999999999987   68999999999998763

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=4.5e-23  Score=179.68  Aligned_cols=174  Identities=12%  Similarity=0.069  Sum_probs=131.6

Q ss_pred             ccEEEEEcCCC--hhhHHHHHHHHhCCCeEEEEecCCCC--------cchhhhhhhhhCCCCCceEEEEccCCCHHHHHH
Q 022471           70 VTHVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLSRG--------NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNK  139 (296)
Q Consensus        70 ~k~vlVTGasG--~IG~~la~~L~~~G~~V~~~~r~~~~--------~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~  139 (296)
                      +|+++||||+|  |||++++++|+++|++|++++|....        ..+..+..++....+.++.++++|++|.+++++
T Consensus         6 ~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~~   85 (256)
T PRK12859          6 NKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPKE   85 (256)
T ss_pred             CcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence            38999999994  99999999999999999988643211        111111112222234578899999999999998


Q ss_pred             Hhhc-----CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCC
Q 022471          140 FFSE-----NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKM  206 (296)
Q Consensus       140 ~~~~-----~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~  206 (296)
                      ++++     +++|+||||||......    ..+..+..+++|+.+...    +++.+++.+.++||++||...+      
T Consensus        86 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~------  159 (256)
T PRK12859         86 LLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQ------  159 (256)
T ss_pred             HHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccC------
Confidence            8865     57999999999754332    333455578899998554    4677776666799999997654      


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          207 PITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       207 ~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                           .+.++...|+.||++++.++++++.+   +|++++.|+||.+-++.
T Consensus       160 -----~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~  205 (256)
T PRK12859        160 -----GPMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGW  205 (256)
T ss_pred             -----CCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCC
Confidence                 33445789999999999999999987   78999999999987763

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.91  E-value=6.8e-23  Score=180.31  Aligned_cols=173  Identities=17%  Similarity=0.154  Sum_probs=129.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcch----hhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc--
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIG----AVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~--  143 (296)
                      +|+++||||+||||++++++|+++|++|++++|+......    ..+..+++...+.++.++.+|+++.+++.+++++  
T Consensus         6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~   85 (273)
T PRK08278          6 GKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAV   85 (273)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            3899999999999999999999999999999987543221    1111122222245788999999999999888765  


Q ss_pred             ---CCCcEEEEcccccCcCCCC----cChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCC
Q 022471          144 ---NAFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEET  212 (296)
Q Consensus       144 ---~~~D~vi~~Ag~~~~~~~~----~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~  212 (296)
                         +++|+||||||........    +..+..+++|+.++..+++++    ++.+.++||++||....           .
T Consensus        86 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-----------~  154 (273)
T PRK08278         86 ERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNL-----------D  154 (273)
T ss_pred             HHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhc-----------c
Confidence               5899999999975543333    334557789999977766555    44455689999985432           1


Q ss_pred             CC--CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCe-eecC
Q 022471          213 PQ--APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFN-VIGS  253 (296)
Q Consensus       213 ~~--~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~-v~Gp  253 (296)
                      +.  ++.++|+.||++++.+++.++.|   ++++++.|.||. +-.+
T Consensus       155 ~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~  201 (273)
T PRK08278        155 PKWFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATA  201 (273)
T ss_pred             ccccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccH
Confidence            22  45789999999999999999988   589999999994 5443

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.91  E-value=5.3e-23  Score=179.71  Aligned_cols=171  Identities=13%  Similarity=0.111  Sum_probs=134.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +++||||||+|+||+++++.|+++|++|++++|+..+.++..+.+..   .+.++.++.+|++|.+++++++++     +
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   77 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELAD---HGGEALVVPTDVSDAEACERLIEAAVARFG   77 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            37899999999999999999999999999999865443333333332   245788899999999999888764     4


Q ss_pred             CCcEEEEcccccCcCCCCcC-----hHHHHHHHHHHHHHHHHHHHH---cCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGESTLD-----PLKYYHNITSNTLVVLESMAR---HGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~~~~-----~~~~~~~n~~~t~~ll~~~~~---~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||........+.     ..+.+++|+.++..+++.+.+   .+.+++|++||...+.           +..+
T Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~  146 (263)
T PRK06181         78 GIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLT-----------GVPT  146 (263)
T ss_pred             CCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccC-----------CCCC
Confidence            79999999997654432222     455688999998888877642   2347899999977662           3345


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.+|.+.+.+++.++.+   .++++++++||.+.++.
T Consensus       147 ~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~  187 (263)
T PRK06181        147 RSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDI  187 (263)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCc
Confidence            678999999999999998765   68999999999998764

>PRK07069 short chain dehydrogenase; Validated

Probab=99.91  E-value=3.4e-23  Score=179.40  Aligned_cols=172  Identities=13%  Similarity=0.125  Sum_probs=131.7

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCCeEEEEecC-CCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL-SRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      +++||||+||||+++++.|+++|++|++++|+ ....+...+.+..... ...+.++++|++|.+++++++++     ++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   79 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHG-EGVAFAAVQDVTDEAQWQALLAQAADAMGG   79 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCC-CceEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            38999999999999999999999999999986 3322233322222111 12355688999999999887764     67


Q ss_pred             CcEEEEcccccCcCCC----CcChHHHHHHHHH----HHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGES----TLDPLKYYHNITS----NTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~~----~~~~~~~~~~n~~----~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +|+||||||.......    .++....+++|+.    ++..++++|++.+.++||++||...+.           +....
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~-----------~~~~~  148 (251)
T PRK07069         80 LSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFK-----------AEPDY  148 (251)
T ss_pred             ccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhcc-----------CCCCC
Confidence            9999999997654332    2234456778887    678899999888888999999987763           22346


Q ss_pred             ChHHHHHHHHHHHHHHhhhc-----CCCcEEEEecCeeecCCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN-----SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~-----~gi~~~~lrpg~v~Gp~~  255 (296)
                      ..|+.+|.+.+.+++.++.+     .+++++.++||.+.+|..
T Consensus       149 ~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~  191 (251)
T PRK07069        149 TAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIV  191 (251)
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcch
Confidence            78999999999999999876     359999999999999863

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.91  E-value=6.2e-23  Score=177.07  Aligned_cols=171  Identities=19%  Similarity=0.137  Sum_probs=132.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+++||||+|+||++++++|+++|++|++++|+..  +...+........+.++.++.+|++|.+++.++++.     ++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   80 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGN--DCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGP   80 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999998643  222222222222235688999999999998887754     57


Q ss_pred             CcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHH----HHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~l----l~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +|+||||||......    ..+..++.++.|+.++..+    ++.+++.+.++||++||...+.           +....
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~-----------~~~~~  149 (245)
T PRK12824         81 VDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLK-----------GQFGQ  149 (245)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhcc-----------CCCCC
Confidence            999999999754322    3344556788999996665    6666766778999999977652           22346


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..|+.+|++.+.+++.++.+   .|+++++++||.+.++.
T Consensus       150 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~  189 (245)
T PRK12824        150 TNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPM  189 (245)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcc
Confidence            78999999999999999875   68999999999998874

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.91  E-value=4.8e-23  Score=180.29  Aligned_cols=159  Identities=17%  Similarity=0.172  Sum_probs=126.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+++||||+||||++++++|+++|++|++++++.....            ..++.++.+|++|.+++++++++     +
T Consensus         9 ~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~------------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   76 (266)
T PRK06171          9 GKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ------------HENYQFVPTDVSSAEEVNHTVAEIIEKFG   76 (266)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc------------cCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999987654321            13677899999999999888765     6


Q ss_pred             CCcEEEEcccccCcC-------------CCCcChHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEcccccccCCCCCC
Q 022471          145 AFDAVMHFAAVAYVG-------------ESTLDPLKYYHNITSNTLVVLESMA----RHGVDTLIYSSTCATYGEPEKMP  207 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~-------------~~~~~~~~~~~~n~~~t~~ll~~~~----~~~~~riV~~SS~~~~g~~~~~~  207 (296)
                      ++|+||||||.....             ...++.+..+++|+.++..+++++.    +.+.++||++||...+.      
T Consensus        77 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------  150 (266)
T PRK06171         77 RIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLE------  150 (266)
T ss_pred             CCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccC------
Confidence            799999999974321             1223345578899999777665554    45567999999977652      


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeee
Q 022471          208 ITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVI  251 (296)
Q Consensus       208 ~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~  251 (296)
                           +......|+.+|.+.+.+++.++.+   +|+++++|+||.+.
T Consensus       151 -----~~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~  192 (266)
T PRK06171        151 -----GSEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE  192 (266)
T ss_pred             -----CCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence                 2334678999999999999999987   68999999999985

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=6e-23  Score=176.85  Aligned_cols=170  Identities=15%  Similarity=0.151  Sum_probs=133.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      ++++||||+|+||++++++|+++|++|++++|+..+..+..+.+..   .+.++.++.+|+++.+++.++++.     ++
T Consensus         8 ~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (239)
T PRK07666          8 KNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEA---YGVKVVIATADVSDYEEVTAAIEQLKNELGS   84 (239)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH---hCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            7899999999999999999999999999999875444333333322   235788899999999999888864     57


Q ss_pred             CcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMA----RHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~----~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +|+||||||......    ..++..+.+++|+.++..+++.+.    +.+.+++|++||...+.           +..+.
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~-----------~~~~~  153 (239)
T PRK07666         85 IDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQK-----------GAAVT  153 (239)
T ss_pred             ccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhcc-----------CCCCC
Confidence            999999999754332    223345678899999777665554    55678999999976552           23346


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..|+.+|.+.+.+++.++.+   .|+++++++||.+.++.
T Consensus       154 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~  193 (239)
T PRK07666        154 SAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDM  193 (239)
T ss_pred             cchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcc
Confidence            78999999999999998866   69999999999999875

>PLN02996 fatty acyl-CoA reductase

Probab=99.91  E-value=1.3e-22  Score=191.80  Aligned_cols=183  Identities=20%  Similarity=0.240  Sum_probs=134.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC---eEEEEecCCCCcchhhhhhh-hh------------CCC------CCceEEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY---RVTIVDNLSRGNIGAVKVLQ-EL------------FPE------PGRLQFI  127 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~---~V~~~~r~~~~~~~~~~~~~-~~------------~~~------~~~~~~~  127 (296)
                      +|+|+|||||||||+++++.|++.+.   +|+++.|........ +.++ +.            .+.      ..++.++
T Consensus        11 ~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~-~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i   89 (491)
T PLN02996         11 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSAT-QRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPV   89 (491)
T ss_pred             CCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHH-HHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEE
Confidence            38999999999999999999998653   678888865433221 1111 10            000      1478999


Q ss_pred             EccCC-------CHHHHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccccc
Q 022471          128 YADLG-------DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVDTLIYSSTCAT  199 (296)
Q Consensus       128 ~~Dl~-------d~~~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-~~~riV~~SS~~~  199 (296)
                      .+|++       +.+.+++++  .++|+|||+|+....   .+++...+++|+.||.++++++++. +.+++|++||+++
T Consensus        90 ~GDl~~~~LGLs~~~~~~~l~--~~vD~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~v  164 (491)
T PLN02996         90 PGDISYDDLGVKDSNLREEMW--KEIDIVVNLAATTNF---DERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYV  164 (491)
T ss_pred             ecccCCcCCCCChHHHHHHHH--hCCCEEEECccccCC---cCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEE
Confidence            99998       445566777  469999999997653   3467788999999999999999885 6789999999999


Q ss_pred             ccCCCC----CCCCCCC-----------------------------------------------CCCCCChHHHHHHHHH
Q 022471          200 YGEPEK----MPITEET-----------------------------------------------PQAPINPYGKAKKMAE  228 (296)
Q Consensus       200 ~g~~~~----~~~~e~~-----------------------------------------------~~~~~~~Y~~sK~~~e  228 (296)
                      ||...+    .++++..                                               ...+.+.|+.||+++|
T Consensus       165 yG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE  244 (491)
T PLN02996        165 CGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGE  244 (491)
T ss_pred             ecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHH
Confidence            986431    1111000                                               1123467999999999


Q ss_pred             HHHHHhhhcCCCcEEEEecCeeecCCCCCCCC
Q 022471          229 DIILDFSKNSDMAVMILRYFNVIGSDPEGRLG  260 (296)
Q Consensus       229 ~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~  260 (296)
                      ++++.++  .+++++++||++||||+..+..|
T Consensus       245 ~lv~~~~--~~lpv~i~RP~~V~G~~~~p~~g  274 (491)
T PLN02996        245 MLLGNFK--ENLPLVIIRPTMITSTYKEPFPG  274 (491)
T ss_pred             HHHHHhc--CCCCEEEECCCEeccCCcCCCCC
Confidence            9998875  38999999999999998655433

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.91  E-value=8e-23  Score=178.19  Aligned_cols=171  Identities=16%  Similarity=0.128  Sum_probs=129.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC-CcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR-GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      +|++|||||+||||++++++|+++|++|++++++.. ..+...+.+.   ..+.++.++.+|++|.+++.+++++     
T Consensus         9 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   85 (258)
T PRK09134          9 PRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIR---ALGRRAVALQADLADEAEVRALVARASAAL   85 (258)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH---hcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            489999999999999999999999999988875432 1222222222   2235688899999999999888764     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMAR----HGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~----~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +++|+||||||......    ..+..+..+++|+.++..+++++.+    ...+++|+++|...+.           +.+
T Consensus        86 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~-----------~~p  154 (258)
T PRK09134         86 GPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWN-----------LNP  154 (258)
T ss_pred             CCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcC-----------CCC
Confidence            57999999999754322    3334566789999998877766554    3456899998865541           223


Q ss_pred             CCChHHHHHHHHHHHHHHhhhcC--CCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKNS--DMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~~--gi~~~~lrpg~v~Gp~  254 (296)
                      ...+|+.||++++.+++.++.+.  ++++++++||.++.+.
T Consensus       155 ~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~  195 (258)
T PRK09134        155 DFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSG  195 (258)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCc
Confidence            35689999999999999998873  4999999999987643

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.91  E-value=2.7e-23  Score=186.47  Aligned_cols=179  Identities=15%  Similarity=0.121  Sum_probs=131.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      |+++||||++|||.+++++|+++| ++|++++|+..+.++..+.+.   ..+.++.++.+|++|.+++++++++     +
T Consensus         4 k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~---~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   80 (314)
T TIGR01289         4 PTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLG---MPKDSYTIMHLDLGSLDSVRQFVQQFRESGR   80 (314)
T ss_pred             CEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc---CCCCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            799999999999999999999999 999999986544333333322   2235678889999999999888765     5


Q ss_pred             CCcEEEEcccccCcC-----CCCcChHHHHHHHHHHHHH----HHHHHHHcC--CCEEEEEcccccccCCCC----CC--
Q 022471          145 AFDAVMHFAAVAYVG-----ESTLDPLKYYHNITSNTLV----VLESMARHG--VDTLIYSSTCATYGEPEK----MP--  207 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~-----~~~~~~~~~~~~n~~~t~~----ll~~~~~~~--~~riV~~SS~~~~g~~~~----~~--  207 (296)
                      ++|++|||||+....     ...+..+..+++|+.++..    +++.|++.+  .++||++||...+.....    .+  
T Consensus        81 ~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~  160 (314)
T TIGR01289        81 PLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKAN  160 (314)
T ss_pred             CCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCccc
Confidence            799999999974321     1234456678899999544    567776653  469999999877532100    00  


Q ss_pred             ----------------CCCCCCCCCCChHHHHHHHHHHHHHHhhhc----CCCcEEEEecCeeec
Q 022471          208 ----------------ITEETPQAPINPYGKAKKMAEDIILDFSKN----SDMAVMILRYFNVIG  252 (296)
Q Consensus       208 ----------------~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~gi~~~~lrpg~v~G  252 (296)
                                      ..+..+..+...|+.||++...++++++++    .|+++++++||.|..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~  225 (314)
T TIGR01289       161 LGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIAD  225 (314)
T ss_pred             ccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccC
Confidence                            011123345678999999999999999865    479999999999963

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.91  E-value=2.5e-23  Score=181.92  Aligned_cols=166  Identities=13%  Similarity=0.151  Sum_probs=126.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+++||||+||||++++++|+++|++|++++|+....++..   ++.   +.++.++++|++|.+++++++++     ++
T Consensus         7 k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   80 (263)
T PRK06200          7 QVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLR---QRF---GDHVLVVEGDVTSYADNQRAVDQTVDAFGK   80 (263)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHh---CCcceEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            89999999999999999999999999999997653322221   221   24678899999999999888765     58


Q ss_pred             CcEEEEcccccCc-CC----CCcC----hHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYV-GE----STLD----PLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEET  212 (296)
Q Consensus       146 ~D~vi~~Ag~~~~-~~----~~~~----~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~  212 (296)
                      +|+||||||+... ..    ..+.    .++.+++|+.++..+++++    ++.+ ++||++||...+.           
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~~sS~~~~~-----------  148 (263)
T PRK06200         81 LDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASG-GSMIFTLSNSSFY-----------  148 (263)
T ss_pred             CCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcC-CEEEEECChhhcC-----------
Confidence            9999999997532 11    1111    3456778988866555444    4443 6899999987652           


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc--CCCcEEEEecCeeecCC
Q 022471          213 PQAPINPYGKAKKMAEDIILDFSKN--SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       213 ~~~~~~~Y~~sK~~~e~~~~~~~~~--~gi~~~~lrpg~v~Gp~  254 (296)
                      +..+...|+.||.+.+.+++.++.+  .+|++++|.||.|..+.
T Consensus       149 ~~~~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~  192 (263)
T PRK06200        149 PGGGGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDL  192 (263)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCC
Confidence            2334668999999999999999987  45999999999998764

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.91  E-value=5.1e-23  Score=180.03  Aligned_cols=168  Identities=15%  Similarity=0.102  Sum_probs=124.2

Q ss_pred             cEEEEEcCCC--hhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           71 THVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        71 k~vlVTGasG--~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      |+++||||++  |||++++++|+++|++|++.+|+. +..+..+.+..   ......++.+|++|.+++++++++     
T Consensus         7 k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (262)
T PRK07984          7 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAA---QLGSDIVLPCDVAEDASIDAMFAELGKVW   82 (262)
T ss_pred             CEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHh---ccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence            8999999986  999999999999999999988752 22222223222   223467789999999999988865     


Q ss_pred             CCCcEEEEcccccCcCC---------CCcChHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEcccccccCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE---------STLDPLKYYHNITSNTLVVLESMAR--HGVDTLIYSSTCATYGEPEKMPITEET  212 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~---------~~~~~~~~~~~n~~~t~~ll~~~~~--~~~~riV~~SS~~~~g~~~~~~~~e~~  212 (296)
                      +++|++|||||+.....         ..+..+..+++|+.+...+.+++..  ...++||++||.+..           .
T Consensus        83 g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~-----------~  151 (262)
T PRK07984         83 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE-----------R  151 (262)
T ss_pred             CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCC-----------C
Confidence            67999999999753211         1223345677898885554444321  123689999996643           2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecC
Q 022471          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGS  253 (296)
Q Consensus       213 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp  253 (296)
                      +.+....|++||++.+.+++.++.|   +||++++|.||.|..+
T Consensus       152 ~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~  195 (262)
T PRK07984        152 AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTL  195 (262)
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccch
Confidence            3334678999999999999999987   6899999999999775

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.91  E-value=5.2e-23  Score=179.08  Aligned_cols=172  Identities=13%  Similarity=0.095  Sum_probs=133.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+|+||||+|+||++++++|+++|++|++++|+....++..+.+...   +.++.++.+|+++.+++++++++     +
T Consensus         9 ~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (258)
T PRK06949          9 GKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAE---GGAAHVVSLDVTDYQSIKAAVAHAETEAG   85 (258)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            389999999999999999999999999999998654433333333222   35688999999999999888764     5


Q ss_pred             CCcEEEEcccccCcCCC----CcChHHHHHHHHHHHHHHHHHHH----HcC--------CCEEEEEcccccccCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGES----TLDPLKYYHNITSNTLVVLESMA----RHG--------VDTLIYSSTCATYGEPEKMPI  208 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~----~~~~~~~~~~n~~~t~~ll~~~~----~~~--------~~riV~~SS~~~~g~~~~~~~  208 (296)
                      ++|+||||||.......    .+.+...+++|+.++..+++.+.    +..        .+++|++||...+.       
T Consensus        86 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-------  158 (258)
T PRK06949         86 TIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLR-------  158 (258)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccC-------
Confidence            79999999997543322    23455578889888776665543    332        35899999977652       


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          209 TEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       209 ~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                          +..+..+|+.+|++.+.+++.++.+   .++++++++||+|++|..
T Consensus       159 ----~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~  204 (258)
T PRK06949        159 ----VLPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEIN  204 (258)
T ss_pred             ----CCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcc
Confidence                3344678999999999999999887   689999999999999864

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.91  E-value=6.6e-23  Score=178.11  Aligned_cols=163  Identities=18%  Similarity=0.158  Sum_probs=129.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+++||||+||||++++++|+++|++|++++|+...     +    .  .+.++.++++|++|.++++++++.     +
T Consensus         6 ~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-----~----~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   74 (252)
T PRK07856          6 GRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-----T----V--DGRPAEFHAADVRDPDQVAALVDAIVERHG   74 (252)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-----h----h--cCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999986432     0    0  135678899999999999888764     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHH----c-CCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMAR----H-GVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~----~-~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||......    ..+..++.+++|+.++..+++++.+    . +.++||++||...+           .+.+
T Consensus        75 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~-----------~~~~  143 (252)
T PRK07856         75 RLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGR-----------RPSP  143 (252)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccC-----------CCCC
Confidence            7999999999754332    2334456788999998887776543    2 34799999997664           2334


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc--CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN--SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~--~gi~~~~lrpg~v~Gp~  254 (296)
                      ..+.|+.||.+.+.+++.++.+  ..+++++++||.|.++.
T Consensus       144 ~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~  184 (252)
T PRK07856        144 GTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQ  184 (252)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChH
Confidence            5788999999999999999987  23999999999998874

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.91  E-value=1.2e-23  Score=168.56  Aligned_cols=186  Identities=17%  Similarity=0.113  Sum_probs=143.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |.++||||++|||+++++.|+++|++|.+++++....++....   +.. +..-..+.||+++.++++..+++     +.
T Consensus        15 k~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~---L~g-~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~   90 (256)
T KOG1200|consen   15 KVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGD---LGG-YGDHSAFSCDVSKAHDVQNTLEEMEKSLGT   90 (256)
T ss_pred             ceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhh---cCC-CCccceeeeccCcHHHHHHHHHHHHHhcCC
Confidence            8899999999999999999999999999999766544433333   322 23556779999999999887766     78


Q ss_pred             CcEEEEcccccCcC----CCCcChHHHHHHHHHHHHHHHHHHHH----c--CCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVG----ESTLDPLKYYHNITSNTLVVLESMAR----H--GVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~----~~~~~~~~~~~~n~~~t~~ll~~~~~----~--~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +++|+||||+....    ...+++.+.+.+|+.|+..+.+++.+    .  +..+||++||.-..           ....
T Consensus        91 psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGk-----------iGN~  159 (256)
T KOG1200|consen   91 PSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGK-----------IGNF  159 (256)
T ss_pred             CcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcc-----------cccc
Confidence            99999999996543    35667777788999995554444332    2  33499999996543           1223


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      ..+-|++||.....|++..++|   .+|+++++.||+|-.|...               .+-|.+.+.+.+..|
T Consensus       160 GQtnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~---------------~mp~~v~~ki~~~iP  218 (256)
T KOG1200|consen  160 GQTNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTE---------------AMPPKVLDKILGMIP  218 (256)
T ss_pred             cchhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhh---------------hcCHHHHHHHHccCC
Confidence            4678999999999999999988   8999999999999998743               455667777777766

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.91  E-value=7.3e-23  Score=175.32  Aligned_cols=167  Identities=9%  Similarity=0.078  Sum_probs=128.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C-
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N-  144 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~-  144 (296)
                      |+++||||++|||++++++|+++|++|++++|+....++..+.+++.   +.++..+.+|++|.+++++++++     + 
T Consensus         6 k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (227)
T PRK08862          6 SIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL---TDNVYSFQLKDFSQESIRHLFDAIEQQFNR   82 (227)
T ss_pred             eEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc---CCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            89999999999999999999999999999998765554444444332   35677889999999999888764     5 


Q ss_pred             CCcEEEEcccccCc-CCCCc----ChHHHHHHHHHHHH----HHHHHHHHcC-CCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYV-GESTL----DPLKYYHNITSNTL----VVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~-~~~~~----~~~~~~~~n~~~t~----~ll~~~~~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                      ++|++|||||.... ....+    ...+.+++|+.+..    .+++.|++.+ .++||++||...+              
T Consensus        83 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~--------------  148 (227)
T PRK08862         83 APDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH--------------  148 (227)
T ss_pred             CCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC--------------
Confidence            89999999985432 22222    22335566766643    4567776654 5799999995432              


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ++...|+.||++.+.+++.++.|   +|++++.|.||.+-.+.
T Consensus       149 ~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~  191 (227)
T PRK08862        149 QDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANG  191 (227)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCC
Confidence            23568999999999999999987   68999999999988874

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.91  E-value=3.8e-23  Score=181.85  Aligned_cols=168  Identities=14%  Similarity=0.047  Sum_probs=126.8

Q ss_pred             cEEEEEcCC--ChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           71 THVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        71 k~vlVTGas--G~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      |+++||||+  +|||+++|++|+++|++|++++|+....++ .+.+.+..   .....+++|++|.+++++++++     
T Consensus        11 k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~-~~~l~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~~~~   86 (272)
T PRK08159         11 KRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKR-VEPLAAEL---GAFVAGHCDVTDEASIDAVFETLEKKW   86 (272)
T ss_pred             CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHH-HHHHHHhc---CCceEEecCCCCHHHHHHHHHHHHHhc
Confidence            899999997  899999999999999999988764321222 22222211   2355789999999999988765     


Q ss_pred             CCCcEEEEcccccCc----CC----CCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYV----GE----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETP  213 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~----~~----~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~~  213 (296)
                      +++|++|||||+...    .+    ..+..+..+++|+.++..+++.+.+.  +.++||++||.+..           .+
T Consensus        87 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~-----------~~  155 (272)
T PRK08159         87 GKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAE-----------KV  155 (272)
T ss_pred             CCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccc-----------cC
Confidence            679999999997532    11    23345667889999977766655432  23699999986543           23


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecC
Q 022471          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGS  253 (296)
Q Consensus       214 ~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp  253 (296)
                      .+....|+.||++.+.+++.++.|   +||++++|.||.|..+
T Consensus       156 ~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~  198 (272)
T PRK08159        156 MPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTL  198 (272)
T ss_pred             CCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCH
Confidence            344678999999999999999987   6899999999999775

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=7.4e-23  Score=178.20  Aligned_cols=173  Identities=17%  Similarity=0.124  Sum_probs=131.2

Q ss_pred             cEEEEEcCCC--hhhHHHHHHHHhCCCeEEEEecCCCC--------cchhhhhhhhhCCCCCceEEEEccCCCHHHHHHH
Q 022471           71 THVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLSRG--------NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF  140 (296)
Q Consensus        71 k~vlVTGasG--~IG~~la~~L~~~G~~V~~~~r~~~~--------~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~  140 (296)
                      |+||||||+|  |||.+++++|+++|++|++++|++.+        ..............+.+++++.+|+++.++++++
T Consensus         6 k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   85 (256)
T PRK12748          6 KIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNRV   85 (256)
T ss_pred             cEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            8999999995  89999999999999999999886211        1111111111212235688999999999998887


Q ss_pred             hhc-----CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcccccccCCCCCC
Q 022471          141 FSE-----NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMAR----HGVDTLIYSSTCATYGEPEKMP  207 (296)
Q Consensus       141 ~~~-----~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~----~~~~riV~~SS~~~~g~~~~~~  207 (296)
                      +++     +++|+||||||......    ..+..++.+++|+.++..+++++.+    .+.++||++||...+.      
T Consensus        86 ~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~------  159 (256)
T PRK12748         86 FYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLG------  159 (256)
T ss_pred             HHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccC------
Confidence            765     67999999999754333    2233456788999998888877653    3456999999977652      


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          208 ITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       208 ~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                           +..+...|+.||++++.+++.++.+   .+++++.++||.+..+.
T Consensus       160 -----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~  204 (256)
T PRK12748        160 -----PMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGW  204 (256)
T ss_pred             -----CCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCC
Confidence                 3334678999999999999999877   68999999999988763

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.91  E-value=1.2e-23  Score=182.72  Aligned_cols=177  Identities=21%  Similarity=0.273  Sum_probs=112.1

Q ss_pred             EEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhh-hhhCC----------CCCceEEEEccCCCH------H
Q 022471           75 VTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVL-QELFP----------EPGRLQFIYADLGDA------K  135 (296)
Q Consensus        75 VTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~-~~~~~----------~~~~~~~~~~Dl~d~------~  135 (296)
                      |||||||||++++++|++.+.  +|+++.|..... .+.+.+ +.+..          ...+++++.+|++++      +
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~-~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~   79 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQ-SALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDE   79 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHH-HHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccc-cchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChH
Confidence            799999999999999999987  899999865332 222222 11110          136899999999974      4


Q ss_pred             HHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCC--------
Q 022471          136 AVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMP--------  207 (296)
Q Consensus       136 ~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~--------  207 (296)
                      ++..+.  ..+|+|||||+......   ...+..+.|+.||+++++.+.+...++++|+||+.+.+......        
T Consensus        80 ~~~~L~--~~v~~IiH~Aa~v~~~~---~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~  154 (249)
T PF07993_consen   80 DYQELA--EEVDVIIHCAASVNFNA---PYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEE  154 (249)
T ss_dssp             HHHHHH--HH--EEEE--SS-SBS----S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH
T ss_pred             Hhhccc--cccceeeecchhhhhcc---cchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccc
Confidence            566665  46999999999765533   44557889999999999999977767999999955554433211        


Q ss_pred             -CCCCCCCCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCC
Q 022471          208 -ITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEG  257 (296)
Q Consensus       208 -~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~  257 (296)
                       ...+......+.|..||+.+|.+++.++++.|++++++|||.|+|....+
T Consensus       155 ~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G  205 (249)
T PF07993_consen  155 EDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTG  205 (249)
T ss_dssp             --EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS
T ss_pred             cccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCc
Confidence             01111233456899999999999999988789999999999999954443

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.91  E-value=6e-23  Score=176.57  Aligned_cols=163  Identities=17%  Similarity=0.210  Sum_probs=125.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |++|||||+||||++++++|+++|++|++++|+...   ..+.++.     .++.++.+|++|.+++++++++     ++
T Consensus         3 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   74 (236)
T PRK06483          3 APILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYP---AIDGLRQ-----AGAQCIQADFSTNAGIMAFIDELKQHTDG   74 (236)
T ss_pred             ceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchh---HHHHHHH-----cCCEEEEcCCCCHHHHHHHHHHHHhhCCC
Confidence            789999999999999999999999999999986532   2222222     2367889999999999888765     56


Q ss_pred             CcEEEEcccccCcCC----CCcChHHHHHHHHHHHHH----HHHHHHHcC--CCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLV----VLESMARHG--VDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~--~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +|++|||||......    ..++.+..+++|+.++..    +++.|++.+  .++||++||....           .+.+
T Consensus        75 id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~-----------~~~~  143 (236)
T PRK06483         75 LRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVE-----------KGSD  143 (236)
T ss_pred             ccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhc-----------cCCC
Confidence            999999999753322    234455678888888654    555555554  4689999996543           2233


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc--CCCcEEEEecCeeec
Q 022471          216 PINPYGKAKKMAEDIILDFSKN--SDMAVMILRYFNVIG  252 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~--~gi~~~~lrpg~v~G  252 (296)
                      ....|+.||++.+.+++.++.+  .++++++|+||.+..
T Consensus       144 ~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~  182 (236)
T PRK06483        144 KHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILF  182 (236)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceec
Confidence            4678999999999999999988  469999999999854

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.91  E-value=4e-23  Score=180.52  Aligned_cols=167  Identities=16%  Similarity=0.147  Sum_probs=126.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+++||||+||||++++++|+++|++|++++|+....+    .+.+.  .+.++.++++|++|.+++.+++++     +
T Consensus         5 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (262)
T TIGR03325         5 GEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQ----ELEAA--HGDAVVGVEGDVRSLDDHKEAVARCVAAFG   78 (262)
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHhh--cCCceEEEEeccCCHHHHHHHHHHHHHHhC
Confidence            389999999999999999999999999999987543222    22221  124688899999999988887765     6


Q ss_pred             CCcEEEEcccccCc-CC----CC----cChHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEcccccccCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYV-GE----ST----LDPLKYYHNITSNTLVVLESMA----RHGVDTLIYSSTCATYGEPEKMPITEE  211 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~-~~----~~----~~~~~~~~~n~~~t~~ll~~~~----~~~~~riV~~SS~~~~g~~~~~~~~e~  211 (296)
                      ++|+||||||.... ..    ..    +...+.+++|+.++..+++++.    +.+ +++|++||...+           
T Consensus        79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~~sS~~~~-----------  146 (262)
T TIGR03325        79 KIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GSVIFTISNAGF-----------  146 (262)
T ss_pred             CCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CCEEEEecccee-----------
Confidence            89999999997421 11    11    1345678899999777665554    333 678888886654           


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhcC--CCcEEEEecCeeecCC
Q 022471          212 TPQAPINPYGKAKKMAEDIILDFSKNS--DMAVMILRYFNVIGSD  254 (296)
Q Consensus       212 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~--gi~~~~lrpg~v~Gp~  254 (296)
                      .+......|+.||.+.+.+++.++.+.  .+++++|.||.+..+.
T Consensus       147 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~  191 (262)
T TIGR03325       147 YPNGGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDL  191 (262)
T ss_pred             cCCCCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCC
Confidence            223345689999999999999999883  4999999999998774

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.91  E-value=7.4e-23  Score=177.49  Aligned_cols=163  Identities=18%  Similarity=0.193  Sum_probs=132.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+|+||++++++|+++|++|++++|+.         +..   .+.++.++++|++|.+++++++++     +
T Consensus         8 ~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   75 (252)
T PRK08220          8 GKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQ---EDYPFATFVLDVSDAAAVAQVCQRLLAETG   75 (252)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhh---cCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999998754         111   135688899999999999988865     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||......    ..++....+++|+.++..+++++    ++.+.++||++||....           .+..+
T Consensus        76 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~-----------~~~~~  144 (252)
T PRK08220         76 PLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAH-----------VPRIG  144 (252)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhc-----------cCCCC
Confidence            7999999999754433    23445667889999977766654    45566799999997653           23445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      .+.|+.||.+.+.+++.++.+   +|+++++++||.+++|..
T Consensus       145 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~  186 (252)
T PRK08220        145 MAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQ  186 (252)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhh
Confidence            788999999999999999987   799999999999999863

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.91  E-value=4.5e-23  Score=180.19  Aligned_cols=169  Identities=18%  Similarity=0.094  Sum_probs=124.7

Q ss_pred             cEEEEEcCCC--hhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           71 THVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        71 k~vlVTGasG--~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      |+++||||++  |||++++++|+++|++|++.+|+. ..++..+.+.+..   ....++++|++|.+++++++++     
T Consensus         9 k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~---g~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (260)
T PRK06603          9 KKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEI---GCNFVSELDVTNPKSISNLFDDIKEKW   84 (260)
T ss_pred             cEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhc---CCceEEEccCCCHHHHHHHHHHHHHHc
Confidence            8999999997  999999999999999999988752 2222222222211   2234678999999999988865     


Q ss_pred             CCCcEEEEcccccCc----CC----CCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYV----GE----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETP  213 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~----~~----~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~~  213 (296)
                      +++|+||||||....    .+    ..+...+.+++|+.+...+++.+.+.  ..++||++||.+..           .+
T Consensus        85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~-----------~~  153 (260)
T PRK06603         85 GSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAE-----------KV  153 (260)
T ss_pred             CCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccc-----------cC
Confidence            779999999997532    11    23345557888999866655443211  23699999996543           22


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       214 ~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      .+....|+.||++.+.+++.++.|   +||++++|.||.|-.+.
T Consensus       154 ~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~  197 (260)
T PRK06603        154 IPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLA  197 (260)
T ss_pred             CCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchh
Confidence            334678999999999999999987   78999999999997763

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=9.2e-23  Score=176.92  Aligned_cols=168  Identities=20%  Similarity=0.229  Sum_probs=127.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+++||||+||||+++++.|+++|++|++++++..  ....+...+.   +.++.++++|++|.+++++++++     ++
T Consensus         6 k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~--~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   80 (253)
T PRK08642          6 QTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSE--DAAEALADEL---GDRAIALQADVTDREQVQAMFATATEHFGK   80 (253)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCH--HHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            89999999999999999999999999988765322  1122211222   24688899999999999888765     34


Q ss_pred             -CcEEEEcccccCc------C----CCCcChHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEcccccccCCCCCCCCC
Q 022471          146 -FDAVMHFAAVAYV------G----ESTLDPLKYYHNITSNTLVVLESMA----RHGVDTLIYSSTCATYGEPEKMPITE  210 (296)
Q Consensus       146 -~D~vi~~Ag~~~~------~----~~~~~~~~~~~~n~~~t~~ll~~~~----~~~~~riV~~SS~~~~g~~~~~~~~e  210 (296)
                       +|++|||||....      .    ...+...+.+++|+.++..+++++.    +.+.++||++||....          
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~----------  150 (253)
T PRK08642         81 PITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQ----------  150 (253)
T ss_pred             CCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCcccc----------
Confidence             9999999986321      1    1223345678899999777666654    4556799999996432          


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       211 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                       .+..+..+|+.||++.+.+++.++++   .|++++.|+||.+..+.
T Consensus       151 -~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~  196 (253)
T PRK08642        151 -NPVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTD  196 (253)
T ss_pred             -CCCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCch
Confidence             23445678999999999999999987   68999999999998763

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.91  E-value=8.5e-23  Score=178.13  Aligned_cols=170  Identities=14%  Similarity=0.070  Sum_probs=132.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-CCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~v  149 (296)
                      |+++||||+|+||.++++.|+++|++|++++|+..+.++..+.+....  +.++.++.+|++|.++++++++. +++|++
T Consensus         8 k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~~~g~id~l   85 (259)
T PRK06125          8 KRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAH--GVDVAVHALDLSSPEAREQLAAEAGDIDIL   85 (259)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhc--CCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence            899999999999999999999999999999987554444333333221  24678899999999999998876 689999


Q ss_pred             EEcccccCcCC----CCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHH
Q 022471          150 MHFAAVAYVGE----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYG  221 (296)
Q Consensus       150 i~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~  221 (296)
                      |||||......    ..++....+++|+.+...    +++.|++.+.++||++||....           .+......|+
T Consensus        86 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~-----------~~~~~~~~y~  154 (259)
T PRK06125         86 VNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGE-----------NPDADYICGS  154 (259)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCcccc-----------CCCCCchHhH
Confidence            99999754332    233445567889998544    5555666656799999986543           2334467899


Q ss_pred             HHHHHHHHHHHHhhhc---CCCcEEEEecCeeecC
Q 022471          222 KAKKMAEDIILDFSKN---SDMAVMILRYFNVIGS  253 (296)
Q Consensus       222 ~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp  253 (296)
                      .+|.+.+.++++++.+   .|++++.++||.+.++
T Consensus       155 ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~  189 (259)
T PRK06125        155 AGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATD  189 (259)
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEecCccccH
Confidence            9999999999999876   6899999999999877

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.91  E-value=8.3e-23  Score=178.85  Aligned_cols=170  Identities=18%  Similarity=0.097  Sum_probs=130.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+++||||+|+||++++++|+++|++|++++|+.....+..+.+...   +.++.++.+|++|.+++++++++     +
T Consensus         9 ~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~   85 (264)
T PRK07576          9 GKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQA---GPEGLGVSADVRDYAAVEAAFAQIADEFG   85 (264)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999998654433333333322   34678889999999999888765     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHHc---CCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARH---GVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~---~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      ++|+||||||......    ..++..+.+++|+.++.++++++.+.   ..++||++||...+           .+.+..
T Consensus        86 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~-----------~~~~~~  154 (264)
T PRK07576         86 PIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAF-----------VPMPMQ  154 (264)
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhc-----------cCCCCc
Confidence            7999999998643222    23344557889999988776665431   23699999997654           233457


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGS  253 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp  253 (296)
                      ..|+.+|.+.+.+++.++.+   .|+++++++||.+.+.
T Consensus       155 ~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t  193 (264)
T PRK07576        155 AHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGT  193 (264)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCc
Confidence            78999999999999999877   6899999999998753

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.4e-22  Score=174.65  Aligned_cols=199  Identities=16%  Similarity=0.129  Sum_probs=136.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC--HHHHHHHhhc-----
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD--AKAVNKFFSE-----  143 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~-----  143 (296)
                      |+++||||+||||++++++|+++|++|++++|+....+...+.+.+..  ...+.++.+|+++  .+++.+++++     
T Consensus         7 k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~   84 (239)
T PRK08703          7 KTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAG--HPEPFAIRFDLMSAEEKEFEQFAATIAEAT   84 (239)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcC--CCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence            899999999999999999999999999999987654444433333221  2356778899976  3455554432     


Q ss_pred             -CCCcEEEEcccccCc-CC----CCcChHHHHHHHHHHHHHHHHH----HHHcCCCEEEEEcccccccCCCCCCCCCCCC
Q 022471          144 -NAFDAVMHFAAVAYV-GE----STLDPLKYYHNITSNTLVVLES----MARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (296)
Q Consensus       144 -~~~D~vi~~Ag~~~~-~~----~~~~~~~~~~~n~~~t~~ll~~----~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~  213 (296)
                       +++|+||||||.... .+    ..++..+.+++|+.++..++++    +.+.+.+++|++||....           .+
T Consensus        85 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~-----------~~  153 (239)
T PRK08703         85 QGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGE-----------TP  153 (239)
T ss_pred             CCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccc-----------cC
Confidence             478999999997432 11    2234445788999996665544    455556799999996543           23


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhcC----CCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHh
Q 022471          214 QAPINPYGKAKKMAEDIILDFSKNS----DMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAAR  282 (296)
Q Consensus       214 ~~~~~~Y~~sK~~~e~~~~~~~~~~----gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  282 (296)
                      .+....|+.||++.+.+++.++.+.    ++++++|+||+|++|.............+.....+++.+...+.
T Consensus       154 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (239)
T PRK08703        154 KAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEAKSERKSYGDVLPAFVWWAS  226 (239)
T ss_pred             CCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCCCCccccCCHHHHHHHHHHHhC
Confidence            3446789999999999999999873    69999999999999963221111111112222356666665554

>PRK05855 short chain dehydrogenase; Validated

Probab=99.90  E-value=5.6e-23  Score=198.52  Aligned_cols=203  Identities=17%  Similarity=0.149  Sum_probs=150.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      ++++|||||+||||++++++|+++|++|++++|+....++..+.++..   +.++.++.+|++|.+++.+++++     +
T Consensus       315 ~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  391 (582)
T PRK05855        315 GKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAA---GAVAHAYRVDVSDADAMEAFAEWVRAEHG  391 (582)
T ss_pred             CCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            389999999999999999999999999999998765444444444332   35788999999999999888865     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHH----HHHHHHHcC-CCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLV----VLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||+.....    ..++....+++|+.|+.+    +++.|++++ .++||++||.+.|.           +.+
T Consensus       392 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~~  460 (582)
T PRK05855        392 VPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYA-----------PSR  460 (582)
T ss_pred             CCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc-----------CCC
Confidence            7999999999865443    233445577899988665    445566655 36999999988873           334


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCCCCC-C-CCCC--------------CcccccccccHHH
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDPEGR-L-GEAP--------------RPELREHGRISGA  276 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~~~~-~-~~~~--------------~~~~~~~~~~i~~  276 (296)
                      +...|+.||++.+.+++.++.+   +||++++|+||.|-.+..... + +...              ......+..+...
T Consensus       461 ~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~  540 (582)
T PRK05855        461 SLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKA  540 (582)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHH
Confidence            5789999999999999999877   689999999999977532111 0 0000              0000112367888


Q ss_pred             HHHHHhCCCC
Q 022471          277 CFDAARGIIA  286 (296)
Q Consensus       277 ~~~~~~~~~~  286 (296)
                      +++.+..+++
T Consensus       541 ~~~~~~~~~~  550 (582)
T PRK05855        541 IVDAVKRNKA  550 (582)
T ss_pred             HHHHHHcCCC
Confidence            8888888887

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.90  E-value=6.9e-23  Score=179.01  Aligned_cols=169  Identities=12%  Similarity=0.025  Sum_probs=124.3

Q ss_pred             cEEEEEcC--CChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           71 THVLVTGG--AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        71 k~vlVTGa--sG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      |+++||||  ++|||++++++|+++|++|++++|..+..+... .+.+..   .....+++|++|.+++++++++     
T Consensus         7 k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~   82 (260)
T PRK06997          7 KRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRIT-EFAAEF---GSDLVFPCDVASDEQIDALFASLGQHW   82 (260)
T ss_pred             cEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHH-HHHHhc---CCcceeeccCCCHHHHHHHHHHHHHHh
Confidence            89999996  689999999999999999999876433222222 222211   2234688999999999988865     


Q ss_pred             CCCcEEEEcccccCcC---------CCCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVG---------ESTLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEET  212 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~---------~~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~  212 (296)
                      +++|++|||||.....         ...++....+++|+.+...+.+++.+.  ..++||++||....           .
T Consensus        83 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~-----------~  151 (260)
T PRK06997         83 DGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAE-----------R  151 (260)
T ss_pred             CCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccc-----------c
Confidence            7899999999975321         122344457889999865544443321  23689999996643           2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       213 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +.+....|+.||++.+.+++.++.|   +||+++.|.||.|-.+.
T Consensus       152 ~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~  196 (260)
T PRK06997        152 VVPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLA  196 (260)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccch
Confidence            2334678999999999999999987   68999999999997753

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.4e-22  Score=175.31  Aligned_cols=171  Identities=18%  Similarity=0.186  Sum_probs=133.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+++||||+|+||++++++|+++|++|++++|+..+.....+.++.   .+.++.++.+|++|.+++++++++     +
T Consensus         7 ~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   83 (250)
T PRK12939          7 GKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEA---AGGRAHAIAADLADPASVQRFFDAAAAALG   83 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999998765444433333332   235688999999999999888865     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||......    ..+..++.++.|+.++..+++.+    .+.+.+++|++||...+.           +...
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  152 (250)
T PRK12939         84 GLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALW-----------GAPK  152 (250)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhcc-----------CCCC
Confidence            7999999999754432    22334556789999977766555    444556999999976642           2334


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.+|++.+.+++.++.+   .+++++.++||.+.++.
T Consensus       153 ~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~  193 (250)
T PRK12939        153 LGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEA  193 (250)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCcc
Confidence            578999999999999999876   68999999999998775

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.90  E-value=1.7e-22  Score=184.00  Aligned_cols=179  Identities=20%  Similarity=0.250  Sum_probs=133.6

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCcc---hhhhhhhhhCC---C-C-CceEEEEccCCCH------H
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNI---GAVKVLQELFP---E-P-GRLQFIYADLGDA------K  135 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~---~~~~~~~~~~~---~-~-~~~~~~~~Dl~d~------~  135 (296)
                      +|+|||||||||++++++|+++|  ++|+++.|+.....   +..+.++....   . . .++.++.+|++++      +
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999999  67999998654321   11122211110   0 0 4688999999854      4


Q ss_pred             HHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCC--
Q 022471          136 AVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP--  213 (296)
Q Consensus       136 ~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~--  213 (296)
                      .+..+.  .++|+|||||+....   ........+.|+.++.++++++.+.+.+++|++||.++|+.....+..++.+  
T Consensus        81 ~~~~~~--~~~d~vih~a~~~~~---~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~  155 (367)
T TIGR01746        81 EWERLA--ENVDTIVHNGALVNW---VYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIV  155 (367)
T ss_pred             HHHHHH--hhCCEEEeCCcEecc---CCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCcccccccc
Confidence            556655  579999999997543   2345567789999999999999998888899999999997643332233322  


Q ss_pred             ---CCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          214 ---QAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       214 ---~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                         ..+.+.|+.||.++|.+++.+.. .|++++++|||.|||+...
T Consensus       156 ~~~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~i~Rpg~v~G~~~~  200 (367)
T TIGR01746       156 TPPPGLAGGYAQSKWVAELLVREASD-RGLPVTIVRPGRILGNSYT  200 (367)
T ss_pred             ccccccCCChHHHHHHHHHHHHHHHh-cCCCEEEECCCceeecCCC
Confidence               12356899999999999988766 4999999999999998543

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.90  E-value=1.5e-22  Score=174.47  Aligned_cols=172  Identities=19%  Similarity=0.165  Sum_probs=134.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+|+||||+|+||.+++++|+++|++|++++|++.+.....+.++.   .+.++.++.+|++|.+++.+++++     +.
T Consensus         6 ~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (246)
T PRK05653          6 KTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRA---AGGEARVLVFDVSDEAAVRALIEAAVEAFGA   82 (246)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh---cCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            7999999999999999999999999999999876544433333332   245788999999999998887764     57


Q ss_pred             CcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +|+|||+||......    ..+...+.++.|+.++.++++.+    .+.+.++||++||.....           +..+.
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~-----------~~~~~  151 (246)
T PRK05653         83 LDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVT-----------GNPGQ  151 (246)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc-----------CCCCC
Confidence            899999999754432    22234556788999977766555    456678999999975531           23446


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~~  256 (296)
                      ..|+.+|.+.+.+++.++++   .++++++++||.++++...
T Consensus       152 ~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~  193 (246)
T PRK05653        152 TNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTE  193 (246)
T ss_pred             cHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchh
Confidence            78999999999999999876   5899999999999998653

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.1e-22  Score=175.87  Aligned_cols=170  Identities=15%  Similarity=0.069  Sum_probs=130.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+++||||+|+||++++++|+++|++|++++|+.. ..+..+.+..   .+.++.++.+|+++.+++++++++     ++
T Consensus         7 ~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   82 (263)
T PRK08226          7 KTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCG---RGHRCTAVVADVRDPASVAAAIKRAKEKEGR   82 (263)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHH---hCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            89999999999999999999999999999987642 2222222221   235678899999999999888765     57


Q ss_pred             CcEEEEcccccCcCCCC----cChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~~~----~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +|+||||||........    +..++.++.|+.++..+++.+    ++.+.++||++||.....          .+.+..
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----------~~~~~~  152 (263)
T PRK08226         83 IDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDM----------VADPGE  152 (263)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc----------cCCCCc
Confidence            99999999975443322    233446889999987766654    344567999999965420          122346


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..|+.+|.+.+.+++.++.+   .|++++.++||.+.++.
T Consensus       153 ~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~  192 (263)
T PRK08226        153 TAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPM  192 (263)
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHH
Confidence            78999999999999999887   58999999999999874

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.90  E-value=9.7e-23  Score=177.55  Aligned_cols=174  Identities=17%  Similarity=0.137  Sum_probs=128.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc-chhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN-IGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      +|+++||||+||||+++++.|+++|++|++++++.... +...+..+++...+.++.++++|++|.+++++++++     
T Consensus         8 ~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (257)
T PRK12744          8 GKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAF   87 (257)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhh
Confidence            38999999999999999999999999977776554322 222222222222235688899999999999988765     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +++|+||||||......    ..+..++.+++|+.++..+++++.+.  ..+++++++|+....           +.+..
T Consensus        88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~-----------~~~~~  156 (257)
T PRK12744         88 GRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGA-----------FTPFY  156 (257)
T ss_pred             CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcc-----------cCCCc
Confidence            57999999999754322    33345667889999988888777643  124677653322211           12235


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +.|+.||++.+.++++++.+   .|+++++++||.+.++.
T Consensus       157 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~  196 (257)
T PRK12744        157 SAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPF  196 (257)
T ss_pred             ccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccch
Confidence            78999999999999999988   47999999999998764

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1e-22  Score=176.26  Aligned_cols=171  Identities=15%  Similarity=0.200  Sum_probs=126.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC-CcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR-GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      ++++||||+|+||++++++|+++|++|++.+++.. ......+.++.   .+.++.++.+|++|.+++.+++++     +
T Consensus         3 ~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06123          3 KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRR---QGGEALAVAADVADEADVLRLFEAVDRELG   79 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHh---CCCcEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence            68999999999999999999999999988764322 11122222221   234678899999999999888864     5


Q ss_pred             CCcEEEEcccccCcCC-----CCcChHHHHHHHHHHHHHHHHHHHH----cC---CCEEEEEcccccccCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE-----STLDPLKYYHNITSNTLVVLESMAR----HG---VDTLIYSSTCATYGEPEKMPITEET  212 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~-----~~~~~~~~~~~n~~~t~~ll~~~~~----~~---~~riV~~SS~~~~g~~~~~~~~e~~  212 (296)
                      ++|+||||||......     ..++....+++|+.++..+++.+.+    ..   .++||++||.+.+...         
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------  150 (248)
T PRK06123         80 RLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGS---------  150 (248)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCC---------
Confidence            7999999999754321     2334456789999998776655543    21   2479999997553111         


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       213 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                       ......|+.+|++.+.+++.++.+   +|+++++++||+|++|.
T Consensus       151 -~~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~  194 (248)
T PRK06123        151 -PGEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEI  194 (248)
T ss_pred             -CCCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCch
Confidence             111246999999999999999887   58999999999999985

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.5e-22  Score=174.67  Aligned_cols=171  Identities=25%  Similarity=0.281  Sum_probs=131.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+++||||+|+||++++++|+++|++|+++.++...  ...+..+++...+.++.++.+|++|.+++++++++     ++
T Consensus         6 ~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (245)
T PRK12937          6 KVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAA--AADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR   83 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHH--HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999888764322  11222222222245788999999999999888865     57


Q ss_pred             CcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCCCCCCCCh
Q 022471          146 FDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~  219 (296)
                      +|+||||||......    ..+..++.+++|+.++..+++++.+.  ..++||++||.+.+           .+.++.+.
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~-----------~~~~~~~~  152 (245)
T PRK12937         84 IDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIA-----------LPLPGYGP  152 (245)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecccc-----------CCCCCCch
Confidence            999999999754322    23344557789999988877777543  23689999987654           23445788


Q ss_pred             HHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          220 YGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       220 Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      |+.+|.+.+.+++.++.+   .++++++++||.+-++.
T Consensus       153 Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~  190 (245)
T PRK12937        153 YAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATEL  190 (245)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCch
Confidence            999999999999999876   58999999999987764

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.5e-22  Score=174.78  Aligned_cols=166  Identities=19%  Similarity=0.161  Sum_probs=130.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-CCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~v  149 (296)
                      ++++||||+|+||+++++.|+++|++|++++|+..+.+    .+.+.    .+..++.+|++|.+++.++++. +++|+|
T Consensus        10 ~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~----~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~d~v   81 (245)
T PRK07060         10 KSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALD----RLAGE----TGCEPLRLDVGDDAAIRAALAAAGAFDGL   81 (245)
T ss_pred             CEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHHH----hCCeEEEecCCCHHHHHHHHHHhCCCCEE
Confidence            89999999999999999999999999999997643222    11111    2356789999999999988865 569999


Q ss_pred             EEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEEcccccccCCCCCCCCCCCCCCCCChH
Q 022471          150 MHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMAR----HG-VDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (296)
Q Consensus       150 i~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~----~~-~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (296)
                      |||||......    ..+..++.++.|+.++..+++++.+    .+ .++||++||...+.           +..+...|
T Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~y  150 (245)
T PRK07060         82 VNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALV-----------GLPDHLAY  150 (245)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcC-----------CCCCCcHh
Confidence            99999854332    2234455677999998887776654    33 36999999977652           23346789


Q ss_pred             HHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          221 GKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       221 ~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      +.||.+++.+++.++.+   .+++++.++||.++++..
T Consensus       151 ~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~  188 (245)
T PRK07060        151 CASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMA  188 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchh
Confidence            99999999999999876   589999999999999864

>PRK06484 short chain dehydrogenase; Validated

Probab=99.90  E-value=9.2e-23  Score=195.03  Aligned_cols=169  Identities=21%  Similarity=0.216  Sum_probs=132.9

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|++|||||+||||++++++|+++|++|++++|+....+++.   ++.   +.++..+.+|++|.+++++++++     
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~---~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~  341 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLA---EAL---GDEHLSVQADITDEAAVESAFAQIQARW  341 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHh---CCceeEEEccCCCHHHHHHHHHHHHHHc
Confidence            4599999999999999999999999999999997643332222   222   24567789999999999888865     


Q ss_pred             CCCcEEEEcccccCc-CC----CCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYV-GE----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~-~~----~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      +++|+||||||.... ..    ..+..+..+++|+.++..+++.+.+.  +.++||++||.+.+           .+.++
T Consensus       342 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~~~  410 (520)
T PRK06484        342 GRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASL-----------LALPP  410 (520)
T ss_pred             CCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhc-----------CCCCC
Confidence            679999999997532 11    33445667889999977766655442  34699999997765           23445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.||++.+.+++.++.+   +||++++|+||.|.++.
T Consensus       411 ~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  451 (520)
T PRK06484        411 RNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPA  451 (520)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCch
Confidence            789999999999999999987   58999999999998875

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.4e-22  Score=176.14  Aligned_cols=168  Identities=17%  Similarity=0.161  Sum_probs=130.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+|+||||+|+||++++++|+++|++|++++|+...    .+...+..  ..++.++.+|+++.+++++++++     +
T Consensus        15 ~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~----~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   88 (255)
T PRK06841         15 GKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV----AEVAAQLL--GGNAKGLVCDVSDSQSVEAAVAAVISAFG   88 (255)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            4899999999999999999999999999999986432    11122221  24567899999999999888764     5


Q ss_pred             CCcEEEEcccccCcCCC----CcChHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGES----TLDPLKYYHNITSNTLVVLESMA----RHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~----~~~~~~~~~~n~~~t~~ll~~~~----~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||.......    .+...+.+++|+.++..+++++.    +.+.++||++||....           .+.+.
T Consensus        89 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-----------~~~~~  157 (255)
T PRK06841         89 RIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGV-----------VALER  157 (255)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhc-----------cCCCC
Confidence            79999999997644332    23345578899999777666654    4566899999997653           12334


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.+|.+.+.+++.++.+   .|++++.|+||.|..+.
T Consensus       158 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~  198 (255)
T PRK06841        158 HVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTEL  198 (255)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcc
Confidence            678999999999999999987   68999999999998875

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.90  E-value=4.2e-23  Score=178.29  Aligned_cols=165  Identities=15%  Similarity=0.076  Sum_probs=127.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc------
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------  143 (296)
                      ||+++||||+||||++++++|+++|++|++++|+....  .   ...   .+.++.++++|++|.+++++++++      
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~---~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   72 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L---AAA---AGERLAEVELDLSDAAAAAAWLAGDLLAAF   72 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h---hhc---cCCeEEEEEeccCCHHHHHHHHHHHHHHHh
Confidence            57899999999999999999999999999999864321  1   111   134688899999999999885533      


Q ss_pred             ---CCCcEEEEcccccCcC-C----CCcChHHHHHHHHHHHH----HHHHHHHHcCCCEEEEEcccccccCCCCCCCCCC
Q 022471          144 ---NAFDAVMHFAAVAYVG-E----STLDPLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEE  211 (296)
Q Consensus       144 ---~~~D~vi~~Ag~~~~~-~----~~~~~~~~~~~n~~~t~----~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~  211 (296)
                         .++|++|||||..... .    ..+...+.+++|+.++.    .+++.+.+.+.++||++||...+           
T Consensus        73 ~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-----------  141 (243)
T PRK07023         73 VDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAAR-----------  141 (243)
T ss_pred             ccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhc-----------
Confidence               3689999999975431 1    22334567788999844    45566666666799999998765           


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc--CCCcEEEEecCeeecC
Q 022471          212 TPQAPINPYGKAKKMAEDIILDFSKN--SDMAVMILRYFNVIGS  253 (296)
Q Consensus       212 ~~~~~~~~Y~~sK~~~e~~~~~~~~~--~gi~~~~lrpg~v~Gp  253 (296)
                      .+..+...|+.+|.+.+.+++.++.+  .++++++++||.+-++
T Consensus       142 ~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~  185 (243)
T PRK07023        142 NAYAGWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG  185 (243)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence            23445789999999999999999876  6899999999998665

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.90  E-value=1.5e-22  Score=181.03  Aligned_cols=167  Identities=14%  Similarity=0.107  Sum_probs=127.6

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC-CcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR-GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (296)
                      .+|+++||||+||||++++++|+++|++|++.++... ..++..+.++.   .+.++.++.+|++|.++++++++.    
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~---~g~~~~~~~~Dv~d~~~~~~~~~~~~~~   87 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRA---AGAKAVAVAGDISQRATADELVATAVGL   87 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHh---cCCeEEEEeCCCCCHHHHHHHHHHHHHh
Confidence            3489999999999999999999999999999886432 22233333332   245788999999999999888764    


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHH----Hc-------CCCEEEEEcccccccCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMA----RH-------GVDTLIYSSTCATYGEPEKMPI  208 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~----~~-------~~~riV~~SS~~~~g~~~~~~~  208 (296)
                      +++|+||||||+.....    ..++....+++|+.++..+++++.    +.       ..++||++||.+.+.       
T Consensus        88 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------  160 (306)
T PRK07792         88 GGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLV-------  160 (306)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccccc-------
Confidence            68999999999865432    334455678899999877766543    22       125899999976542       


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCe
Q 022471          209 TEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFN  249 (296)
Q Consensus       209 ~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~  249 (296)
                          +......|+.+|++.+.+++.++.+   +||++++|.||.
T Consensus       161 ----~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~  200 (306)
T PRK07792        161 ----GPVGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA  200 (306)
T ss_pred             ----CCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC
Confidence                2234568999999999999999887   799999999983

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.90  E-value=9e-23  Score=176.26  Aligned_cols=173  Identities=17%  Similarity=0.204  Sum_probs=126.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEe-cCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVD-NLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      |++++||||+||||++++++|+++|++|++.. |+.....+..+.++.   .+.++.++.+|++|.+++++++++     
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~d~~~i~~~~~~~~~~~   77 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQ---AGGKAFVLQADISDENQVVAMFTAIDQHD   77 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHh---CCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence            57899999999999999999999999998753 433222222222222   234688899999999999988765     


Q ss_pred             CCCcEEEEcccccCcCC-----CCcChHHHHHHHHHHHHHHHHHH----HHc---CCCEEEEEcccccccCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE-----STLDPLKYYHNITSNTLVVLESM----ARH---GVDTLIYSSTCATYGEPEKMPITEE  211 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~-----~~~~~~~~~~~n~~~t~~ll~~~----~~~---~~~riV~~SS~~~~g~~~~~~~~e~  211 (296)
                      +++|+||||||......     ..++....+++|+.++..+++.+    .+.   ..++||++||...+...        
T Consensus        78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~--------  149 (247)
T PRK09730         78 EPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA--------  149 (247)
T ss_pred             CCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC--------
Confidence            67999999999753221     22234567889999976655444    333   23579999997654211        


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       212 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                        +.....|+.+|.+.+.+++.++.+   .++++++++||.+|+|..
T Consensus       150 --~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~  194 (247)
T PRK09730        150 --PGEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMH  194 (247)
T ss_pred             --CCcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCccc
Confidence              111346999999999999998876   589999999999999864

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.90  E-value=1.4e-23  Score=172.24  Aligned_cols=166  Identities=20%  Similarity=0.208  Sum_probs=137.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++++|||.||||++++++|+++|..+.+++-+.++ .+....+++..+. ..+.|++||+++..++++++++     +
T Consensus         5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En-~~a~akL~ai~p~-~~v~F~~~DVt~~~~~~~~f~ki~~~fg   82 (261)
T KOG4169|consen    5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEEN-PEAIAKLQAINPS-VSVIFIKCDVTNRGDLEAAFDKILATFG   82 (261)
T ss_pred             CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhC-HHHHHHHhccCCC-ceEEEEEeccccHHHHHHHHHHHHHHhC
Confidence            4999999999999999999999999988877654443 4444455555443 6889999999999999998877     8


Q ss_pred             CCcEEEEcccccCcCCCCcChHHHHHHHHHH----HHHHHHHHHHcC---CCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGESTLDPLKYYHNITSN----TLVVLESMARHG---VDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~----t~~ll~~~~~~~---~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      .+|++||+||+..    +.+.+.++.+|+.|    |...+++|.+..   .+-||++||...+           +|.+-.
T Consensus        83 ~iDIlINgAGi~~----dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL-----------~P~p~~  147 (261)
T KOG4169|consen   83 TIDILINGAGILD----DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGL-----------DPMPVF  147 (261)
T ss_pred             ceEEEEccccccc----chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEecccccc-----------Cccccc
Confidence            8999999999865    45688888898887    788999997764   4579999997765           566668


Q ss_pred             ChHHHHHHHHHHHHHHhhhc-----CCCcEEEEecCeeec
Q 022471          218 NPYGKAKKMAEDIILDFSKN-----SDMAVMILRYFNVIG  252 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~-----~gi~~~~lrpg~v~G  252 (296)
                      ..|++||++...|+++++..     .|++++.++||.+-.
T Consensus       148 pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t  187 (261)
T KOG4169|consen  148 PVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRT  187 (261)
T ss_pred             hhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchH
Confidence            89999999999999998765     699999999998754

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.2e-22  Score=177.20  Aligned_cols=169  Identities=20%  Similarity=0.179  Sum_probs=129.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      ++++||||+|+||++++++|+++|++|++++|+.....+..+..    .. .++.++.+|++|.+++.+++++     ++
T Consensus        12 ~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (264)
T PRK12829         12 LRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARL----PG-AKVTATVADVADPAQVERVFDTAVERFGG   86 (264)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH----hc-CceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            89999999999999999999999999999998644332222211    11 2568899999999999888765     58


Q ss_pred             CcEEEEcccccCc-----CCCCcChHHHHHHHHHHHHHHHHHH----HHcCC-CEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYV-----GESTLDPLKYYHNITSNTLVVLESM----ARHGV-DTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       146 ~D~vi~~Ag~~~~-----~~~~~~~~~~~~~n~~~t~~ll~~~----~~~~~-~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +|+|||+||....     ....+...+.++.|+.++..+++.+    .+.+. ++||++||.+..           .+.+
T Consensus        87 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~-----------~~~~  155 (264)
T PRK12829         87 LDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGR-----------LGYP  155 (264)
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccc-----------cCCC
Confidence            9999999997622     1233445678899999988776665    44444 578888885543           1223


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      +...|+.+|.+.+.+++.++.+   .++++++++||+++||..
T Consensus       156 ~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~  198 (264)
T PRK12829        156 GRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRM  198 (264)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHH
Confidence            4568999999999999999876   589999999999999864

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.1e-22  Score=176.93  Aligned_cols=167  Identities=19%  Similarity=0.177  Sum_probs=126.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+|+||||+||||.+++++|+++|++|++++|+....+...+   +.     ...++++|++|.+++++++++     +
T Consensus         7 ~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~---~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~   78 (255)
T PRK06057          7 GRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAAD---EV-----GGLFVPTDVTDEDAVNALFDTAAETYG   78 (255)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---Hc-----CCcEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999976433222221   11     125789999999999888865     5


Q ss_pred             CCcEEEEcccccCcC--C----CCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccc-cccCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVG--E----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCA-TYGEPEKMPITEETP  213 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~--~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~-~~g~~~~~~~~e~~~  213 (296)
                      ++|+||||||.....  .    ..+..++.+++|+.++..    +++.+++.+.++||++||.. .++.           
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~-----------  147 (255)
T PRK06057         79 SVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGS-----------  147 (255)
T ss_pred             CCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCC-----------
Confidence            799999999975321  1    223355678899998655    45555566667999999864 3421           


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       214 ~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      ..+...|+.+|++.+.+++.++.+   .|+++++++||.+.+|..
T Consensus       148 ~~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~  192 (255)
T PRK06057        148 ATSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLL  192 (255)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchh
Confidence            123567999999999999988776   589999999999998863

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.1e-22  Score=196.54  Aligned_cols=202  Identities=13%  Similarity=0.048  Sum_probs=147.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+++||||+||||++++++|+++|++|++++|+....++..+.+..   .+.++.++.+|++|.+++++++++     +
T Consensus       371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  447 (657)
T PRK07201        371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRA---KGGTAHAYTCDLTDSAAVDHTVKDILAEHG  447 (657)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh---cCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            48999999999999999999999999999999865444433333322   235788999999999999888764     5


Q ss_pred             CCcEEEEcccccCcCCC------CcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGES------TLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~------~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                      ++|+||||||.......      .++....+++|+.++..    +++.|++.+.++||++||.+++.           +.
T Consensus       448 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~  516 (657)
T PRK07201        448 HVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQT-----------NA  516 (657)
T ss_pred             CCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcC-----------CC
Confidence            79999999997532221      13456678899999655    45666777778999999988773           23


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      +..+.|+.||++.+.+++.++.|   .|+++++|+||.|.++......... .......-.+...+++.+..+..
T Consensus       517 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~~~-~~~~~~~~~~a~~i~~~~~~~~~  590 (657)
T PRK07201        517 PRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKRYN-NVPTISPEEAADMVVRAIVEKPK  590 (657)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccccc-CCCCCCHHHHHHHHHHHHHhCCc
Confidence            34678999999999999999887   6899999999999987533210000 00111112566666666655443

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.3e-22  Score=178.74  Aligned_cols=176  Identities=18%  Similarity=0.144  Sum_probs=128.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----CCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NAF  146 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~~  146 (296)
                      |+++|||| ||||++++++|+ +|++|++++|+..+.++..+.++.   .+.++.++++|++|.+++++++++    +++
T Consensus         3 k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~i   77 (275)
T PRK06940          3 EVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLRE---AGFDVSTQEVDVSSRESVKALAATAQTLGPV   77 (275)
T ss_pred             CEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHh---cCCeEEEEEeecCCHHHHHHHHHHHHhcCCC
Confidence            78999998 799999999996 899999999865443333333322   235688899999999999888864    679


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCC-------C-CCCCCCC----
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPE-------K-MPITEET----  212 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~-------~-~~~~e~~----  212 (296)
                      |+||||||+..   ..+++.+.+++|+.++..+++++.+.  ..+++|++||.+......       . ..++...    
T Consensus        78 d~li~nAG~~~---~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (275)
T PRK06940         78 TGLVHTAGVSP---SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSL  154 (275)
T ss_pred             CEEEECCCcCC---chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccccc
Confidence            99999999753   23567889999999988877666542  124677777765432110       0 0000000    


Q ss_pred             ----C---CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          213 ----P---QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       213 ----~---~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                          +   ..+...|+.||++.+.+++.++.+   +||++++|+||.+.++.
T Consensus       155 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~  206 (275)
T PRK06940        155 PFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPL  206 (275)
T ss_pred             ccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCcc
Confidence                0   024678999999999999999887   68999999999998874

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.90  E-value=3.3e-22  Score=173.35  Aligned_cols=172  Identities=15%  Similarity=0.095  Sum_probs=130.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      ++++|||||+||||++++++|+++|++|++..|+..  ....+.+......+.++.++.+|+++.+++.+++++     +
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRA--EEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG   83 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCh--HHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999988765322  122222222222234677889999999998888765     5


Q ss_pred             CCcEEEEcccccCcCCCCcC----hHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGESTLD----PLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~~~~----~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (296)
                      ++|+||||||.....+..+.    .++.+++|+.++..+++++.+.  ..++||++||...+           .+.++.+
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-----------~~~~~~~  152 (252)
T PRK06077         84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGI-----------RPAYGLS  152 (252)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhcc-----------CCCCCch
Confidence            79999999997544332222    2456789999977766666543  23689999998876           3445678


Q ss_pred             hHHHHHHHHHHHHHHhhhc--CCCcEEEEecCeeecCC
Q 022471          219 PYGKAKKMAEDIILDFSKN--SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       219 ~Y~~sK~~~e~~~~~~~~~--~gi~~~~lrpg~v~Gp~  254 (296)
                      .|+.||++.+.+++.++++  .++++++++||.+.++.
T Consensus       153 ~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~  190 (252)
T PRK06077        153 IYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKL  190 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChH
Confidence            9999999999999999987  37999999999998874

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.8e-22  Score=177.35  Aligned_cols=171  Identities=19%  Similarity=0.151  Sum_probs=129.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+++||||+||||.+++++|+++|++|++++|+....++..+.+....  .....++.+|++|.+++++++++     ++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALG--GTVPEHRALDISDYDAVAAFAADIHAAHGS   78 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CCcceEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            579999999999999999999999999999886544333333333221  12345678999999998887765     57


Q ss_pred             CcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHH----Hc-CCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMA----RH-GVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~----~~-~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      +|+||||||......    ..++....+++|+.++..+++++.    +. ..++||++||...+           .+.+.
T Consensus        79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~-----------~~~~~  147 (272)
T PRK07832         79 MDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGL-----------VALPW  147 (272)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcccccc-----------CCCCC
Confidence            999999999754332    333445678899999877776653    33 24699999997543           12334


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.||++.+.+++.++.+   +++++++++||.+.++.
T Consensus       148 ~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~  188 (272)
T PRK07832        148 HAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPL  188 (272)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcc
Confidence            678999999999999999866   78999999999999875

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.90  E-value=4e-22  Score=171.68  Aligned_cols=171  Identities=19%  Similarity=0.149  Sum_probs=129.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |++|||||+|+||++++++|+++|++|+++.|..  .....+...+....+.++.++.+|++|.+++.+++++     ++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPN--EERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGP   78 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCC--HHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5899999999999999999999999999988721  2222222222211235788999999999998887754     57


Q ss_pred             CcEEEEcccccCcCC----CCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +|+||||||......    ..++..+.++.|+.++..    +++.+++.+.++||++||.....           +..+.
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------~~~~~  147 (242)
T TIGR01829        79 IDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQK-----------GQFGQ  147 (242)
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcC-----------CCCCc
Confidence            999999999754322    233445567889998555    66777777778999999965431           22346


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..|+.+|.+.+.+++.++.+   .|++++.++||.+.++.
T Consensus       148 ~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~  187 (242)
T TIGR01829       148 TNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDM  187 (242)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcc
Confidence            78999999999999999876   68999999999999875

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.5e-22  Score=175.32  Aligned_cols=173  Identities=16%  Similarity=0.158  Sum_probs=130.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-cchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG-NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      |+++||||+||||++++++|+++|++|++++|+... .+...+.++.   .+.++.++.+|++|.+++++++++     +
T Consensus         7 k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK07806          7 KTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEA---AGGRASAVGADLTDEESVAALMDTAREEFG   83 (248)
T ss_pred             cEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHh---cCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            899999999999999999999999999999876432 2222222322   134678899999999999888764     5


Q ss_pred             CCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHH
Q 022471          145 AFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGK  222 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~  222 (296)
                      ++|+||||||....  ...++...+++|+.++.++++.+.+.  ..+++|++||........      ..+.+...+|+.
T Consensus        84 ~~d~vi~~ag~~~~--~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~------~~~~~~~~~Y~~  155 (248)
T PRK07806         84 GLDALVLNASGGME--SGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT------VKTMPEYEPVAR  155 (248)
T ss_pred             CCcEEEECCCCCCC--CCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc------ccCCccccHHHH
Confidence            79999999986432  22345567889999999999888764  235899999954321110      011223678999


Q ss_pred             HHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          223 AKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       223 sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ||+++|.+++.++.+   .++++++++|+.+-++.
T Consensus       156 sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~  190 (248)
T PRK07806        156 SKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTV  190 (248)
T ss_pred             HHHHHHHHHHHHHHHhhccCeEEEEeCCccccCch
Confidence            999999999999876   78999999999887764

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.90  E-value=2.3e-22  Score=174.07  Aligned_cols=172  Identities=15%  Similarity=0.152  Sum_probs=126.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecC-CCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL-SRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      +|+|+||||+||||+++++.|+++|++|+++.++ ....+...+.++.   .+.++.++++|++|.+++++++++     
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRA---AGGRACVVAGDVANEADVIAMFDAVQSAF   78 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh---cCCcEEEEEeccCCHHHHHHHHHHHHHhc
Confidence            3789999999999999999999999999876543 2222222223322   235788999999999999887764     


Q ss_pred             CCCcEEEEcccccCcCC-----CCcChHHHHHHHHHHHHHHHHHH----HHcC---CCEEEEEcccccccCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE-----STLDPLKYYHNITSNTLVVLESM----ARHG---VDTLIYSSTCATYGEPEKMPITEE  211 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~-----~~~~~~~~~~~n~~~t~~ll~~~----~~~~---~~riV~~SS~~~~g~~~~~~~~e~  211 (296)
                      +++|+||||||......     ..++....+++|+.++..++..+    ...+   .++||++||.+.+..         
T Consensus        79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~---------  149 (248)
T PRK06947         79 GRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLG---------  149 (248)
T ss_pred             CCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCC---------
Confidence            57999999999754321     22334556889999976665433    3222   357999999765311         


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       212 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                       ......+|+.||.+.+.+++.++.+   .|+++++++||.+.+|.
T Consensus       150 -~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~  194 (248)
T PRK06947        150 -SPNEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEI  194 (248)
T ss_pred             -CCCCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCccccc
Confidence             1112457999999999999999887   48999999999999884

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.5e-22  Score=172.23  Aligned_cols=158  Identities=17%  Similarity=0.147  Sum_probs=126.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----CCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NAF  146 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~~  146 (296)
                      |+++||||+|+||++++++|+++|++|++++|+....              ....++.+|++|.+++++++++    .++
T Consensus         4 k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~--------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   69 (234)
T PRK07577          4 RTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD--------------FPGELFACDLADIEQTAATLAQINEIHPV   69 (234)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc--------------cCceEEEeeCCCHHHHHHHHHHHHHhCCC
Confidence            8899999999999999999999999999999865331              1124678999999988877754    479


Q ss_pred             cEEEEcccccCcCC----CCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCC
Q 022471          147 DAVMHFAAVAYVGE----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (296)
Q Consensus       147 D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (296)
                      |+||||||......    ..++..+.++.|+.++..    +++.|++.+.++||++||...|+.            +...
T Consensus        70 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~------------~~~~  137 (234)
T PRK07577         70 DAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGA------------LDRT  137 (234)
T ss_pred             cEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCC------------CCch
Confidence            99999999865433    233445578889888555    456666677789999999876532            2357


Q ss_pred             hHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          219 PYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       219 ~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +|+.||.+.+.+++.++.+   .|+++++++||.+.++.
T Consensus       138 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~  176 (234)
T PRK07577        138 SYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETEL  176 (234)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcc
Confidence            8999999999999998876   59999999999998875

>PRK12742 oxidoreductase; Provisional

Probab=99.90  E-value=4e-22  Score=171.29  Aligned_cols=168  Identities=18%  Similarity=0.187  Sum_probs=127.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-CCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~  148 (296)
                      +|+||||||+|+||++++++|+++|++|++++++..  +... .+...    ..+.++.+|++|.+++.+++++ +++|+
T Consensus         6 ~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~--~~~~-~l~~~----~~~~~~~~D~~~~~~~~~~~~~~~~id~   78 (237)
T PRK12742          6 GKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSK--DAAE-RLAQE----TGATAVQTDSADRDAVIDVVRKSGALDI   78 (237)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCH--HHHH-HHHHH----hCCeEEecCCCCHHHHHHHHHHhCCCcE
Confidence            389999999999999999999999999988765321  1121 22111    1356788999999999888865 56999


Q ss_pred             EEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHH
Q 022471          149 VMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGK  222 (296)
Q Consensus       149 vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~  222 (296)
                      ||||||......    ..++.++.+++|+.++..++..+.+.  ..+++|++||....          ..+.++...|+.
T Consensus        79 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~----------~~~~~~~~~Y~~  148 (237)
T PRK12742         79 LVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGD----------RMPVAGMAAYAA  148 (237)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccc----------cCCCCCCcchHH
Confidence            999999754322    23445668889999987776554432  24699999996542          123455788999


Q ss_pred             HHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          223 AKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       223 sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +|++.+.+++.++.+   .|+++++|+||.+..+.
T Consensus       149 sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~  183 (237)
T PRK12742        149 SKSALQGMARGLARDFGPRGITINVVQPGPIDTDA  183 (237)
T ss_pred             hHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCc
Confidence            999999999999887   68999999999998764

>TIGR02415 23BDH acetoin reductases

Probab=99.90  E-value=2e-22  Score=174.99  Aligned_cols=170  Identities=21%  Similarity=0.212  Sum_probs=129.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+++||||+|+||.+++++|+++|++|++++|+.....+..+.+..   .+.++.++.+|++|.+++.+++++     ++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~   77 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQ---AGGKAVAYKLDVSDKDQVFSAIDQAAEKFGG   77 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5799999999999999999999999999998764433333333322   235688999999999999887754     57


Q ss_pred             CcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHH----HHHHHHcC-CCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVV----LESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~l----l~~~~~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      +|+||||||......    ..+..+..+++|+.++..+    ++.+++.+ .+++|++||.....           +.+.
T Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~  146 (254)
T TIGR02415        78 FDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHE-----------GNPI  146 (254)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcC-----------CCCC
Confidence            999999999754332    2334456788999987654    44555544 36899999965531           2234


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      .+.|+.+|++.+.+++.++.+   .++++++++||.+.++.
T Consensus       147 ~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~  187 (254)
T TIGR02415       147 LSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPM  187 (254)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChh
Confidence            778999999999999999877   58999999999997765

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.5e-22  Score=172.90  Aligned_cols=161  Identities=14%  Similarity=0.116  Sum_probs=122.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc--CCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--NAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~--~~~D~  148 (296)
                      |+++||||+||||++++++|+++|++|++++|+..+.++..   ++     .++.++++|++|.+++++++++  .++|+
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~---~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~id~   72 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAA---KE-----LDVDAIVCDNTDPASLEEARGLFPHHLDT   72 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---Hh-----ccCcEEecCCCCHHHHHHHHHHHhhcCcE
Confidence            46999999999999999999999999999987643322211   11     1356789999999999988864  36999


Q ss_pred             EEEcccccCc---C---C---CCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          149 VMHFAAVAYV---G---E---STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       149 vi~~Ag~~~~---~---~---~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +|||||....   .   .   ..+...+.+++|+.++..+++++.+.  ..++||++||.+               .++.
T Consensus        73 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~---------------~~~~  137 (223)
T PRK05884         73 IVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN---------------PPAG  137 (223)
T ss_pred             EEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC---------------CCCc
Confidence            9999985221   0   1   23445667889999966665555431  236999999954               1235


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..|+.||++.+.+++.++.|   +|++++.|.||.+..+.
T Consensus       138 ~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~  177 (223)
T PRK05884        138 SAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPG  177 (223)
T ss_pred             cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchh
Confidence            68999999999999999987   78999999999998764

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.8e-22  Score=172.12  Aligned_cols=169  Identities=17%  Similarity=0.142  Sum_probs=132.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+|+||++++++|+++|++|++++|+..+..+..+.+..     ....++.+|++|.+++.+++++     +
T Consensus         7 ~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (239)
T PRK12828          7 GKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA-----DALRIGGIDLVDPQAARRAVDEVNRQFG   81 (239)
T ss_pred             CCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh-----cCceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            38999999999999999999999999999999876444333332221     2466788999999999888764     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+|||+||......    ..+...+.++.|+.++..+++++    ++.+.++||++||...++.           .++
T Consensus        82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~  150 (239)
T PRK12828         82 RLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKA-----------GPG  150 (239)
T ss_pred             CcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccC-----------CCC
Confidence            7999999999754322    22333456778999987776665    4556789999999887632           234


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.+|.+.+.+++.++.+   .++++++++||.++++.
T Consensus       151 ~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~  191 (239)
T PRK12828        151 MGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPP  191 (239)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcc
Confidence            678999999999999988865   68999999999999985

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.90  E-value=2.4e-22  Score=172.99  Aligned_cols=168  Identities=18%  Similarity=0.136  Sum_probs=129.5

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC-CcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CCC
Q 022471           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR-GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NAF  146 (296)
Q Consensus        73 vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~~  146 (296)
                      |+||||+||||.+++++|+++|++|++++|+.. ..+...+.++   ..+.++.++.+|++|.+++.+++++     +++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQ---AQGGNARLLQFDVADRVACRTLLEADIAEHGAY   77 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH---HcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999886432 2222222222   2245789999999999999887764     679


Q ss_pred             cEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHH-----HHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          147 DAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESM-----ARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       147 D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~-----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      |++|||||......    ..+++...++.|+.++..+++++     ++.+.++||++||...+           .+.++.
T Consensus        78 ~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~-----------~~~~~~  146 (239)
T TIGR01831        78 YGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGV-----------MGNRGQ  146 (239)
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhc-----------cCCCCC
Confidence            99999999754332    34455668889999988776654     33455799999996654           123346


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..|+.+|++.+.+++.++.+   .|++++.++||.+.++.
T Consensus       147 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  186 (239)
T TIGR01831       147 VNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEM  186 (239)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCcccc
Confidence            78999999999999999877   68999999999998875

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=6.2e-22  Score=171.50  Aligned_cols=169  Identities=16%  Similarity=0.151  Sum_probs=129.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      ++++||||+|+||.++++.|+++|++|++++|+..+..+..+.++..   +.++.++.+|++|.++++++++.     ++
T Consensus         6 ~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (253)
T PRK08217          6 KVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL---GTEVRGYAANVTDEEDVEATFAQIAEDFGQ   82 (253)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            89999999999999999999999999999997654433333333322   45788899999999988877765     57


Q ss_pred             CcEEEEcccccCcC-------------CCCcChHHHHHHHHHHHHHH----HHHHHHc-CCCEEEEEcccccccCCCCCC
Q 022471          146 FDAVMHFAAVAYVG-------------ESTLDPLKYYHNITSNTLVV----LESMARH-GVDTLIYSSTCATYGEPEKMP  207 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~-------------~~~~~~~~~~~~n~~~t~~l----l~~~~~~-~~~riV~~SS~~~~g~~~~~~  207 (296)
                      +|+||||||.....             ...+.....+++|+.++..+    ++.+.+. ..++||++||...++.     
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~-----  157 (253)
T PRK08217         83 LNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGN-----  157 (253)
T ss_pred             CCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCC-----
Confidence            99999999964321             12233445778899987654    4455444 3357999999766532     


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          208 ITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       208 ~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                             .+...|+.||++.+.+++.++.+   .|++++.++||.+.++.
T Consensus       158 -------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~  200 (253)
T PRK08217        158 -------MGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEM  200 (253)
T ss_pred             -------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcc
Confidence                   24678999999999999999876   68999999999998875

>PLN02778 3,5-epimerase/4-reductase

Probab=99.89  E-value=7.9e-22  Score=175.60  Aligned_cols=151  Identities=18%  Similarity=0.183  Sum_probs=116.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+||||||+||||+++++.|+++|++|+...                           .|+.|.+.+...++..++|+||
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~---------------------------~~~~~~~~v~~~l~~~~~D~Vi   62 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS---------------------------GRLENRASLEADIDAVKPTHVF   62 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCEEEEec---------------------------CccCCHHHHHHHHHhcCCCEEE
Confidence            7899999999999999999999999987431                           2345566677666656899999


Q ss_pred             EcccccCcC---CCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCC------CCCCCCCCCCC-CCChH
Q 022471          151 HFAAVAYVG---ESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPE------KMPITEETPQA-PINPY  220 (296)
Q Consensus       151 ~~Ag~~~~~---~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~------~~~~~e~~~~~-~~~~Y  220 (296)
                      |+||.....   .++.++.+.+++|+.++.++++++++.+.+ ++++||.++|+...      ..+++|++++. +.++|
T Consensus        63 H~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Y  141 (298)
T PLN02778         63 NAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFY  141 (298)
T ss_pred             ECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCch
Confidence            999986532   245678889999999999999999999885 55666667775422      22467665543 55899


Q ss_pred             HHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCC
Q 022471          221 GKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSD  254 (296)
Q Consensus       221 ~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~  254 (296)
                      +.||.++|.+++.++.     ..++|++.++|++
T Consensus       142 g~sK~~~E~~~~~y~~-----~~~lr~~~~~~~~  170 (298)
T PLN02778        142 SKTKAMVEELLKNYEN-----VCTLRVRMPISSD  170 (298)
T ss_pred             HHHHHHHHHHHHHhhc-----cEEeeecccCCcc
Confidence            9999999999988753     5677777777764

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=4.1e-22  Score=171.15  Aligned_cols=160  Identities=18%  Similarity=0.207  Sum_probs=124.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-CCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~v  149 (296)
                      |+++||||+|+||++++++|+++|++|++++|+.....            ..++.++.+|+++.  ++++++. +++|+|
T Consensus         6 k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~------------~~~~~~~~~D~~~~--~~~~~~~~~~id~l   71 (235)
T PRK06550          6 KTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL------------SGNFHFLQLDLSDD--LEPLFDWVPSVDIL   71 (235)
T ss_pred             CEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc------------CCcEEEEECChHHH--HHHHHHhhCCCCEE
Confidence            89999999999999999999999999999987643210            24678899999987  4444433 689999


Q ss_pred             EEcccccCc-----CCCCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChH
Q 022471          150 MHFAAVAYV-----GESTLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (296)
Q Consensus       150 i~~Ag~~~~-----~~~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (296)
                      |||||....     ....++.++.+++|+.++..+++++    ++.+.++||++||...+.           +......|
T Consensus        72 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~Y  140 (235)
T PRK06550         72 CNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFV-----------AGGGGAAY  140 (235)
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcc-----------CCCCCccc
Confidence            999996421     1133345667889999977766655    445567999999977652           22346789


Q ss_pred             HHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          221 GKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       221 ~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      +.+|.+.+.+++.++.+   .|+++++++||.|.++..
T Consensus       141 ~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~  178 (235)
T PRK06550        141 TASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMT  178 (235)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCccc
Confidence            99999999999999987   589999999999988753

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.89  E-value=4.1e-22  Score=171.91  Aligned_cols=168  Identities=17%  Similarity=0.109  Sum_probs=128.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +++++||||+|+||++++++|+++|+.|++.+|+..+.+   +.....   +.++.++.+|++|.+++++++++     +
T Consensus         6 ~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~---~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (245)
T PRK12936          6 GRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLE---ALAAEL---GERVKIFPANLSDRDEVKALGQKAEADLE   79 (245)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHH---HHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999988876543322   221222   24678899999999999887754     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||......    ..++..+.+++|+.++..+++++    .+.+.++||++||...+.           +.+.
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~  148 (245)
T PRK12936         80 GVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVT-----------GNPG  148 (245)
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCc-----------CCCC
Confidence            7999999999754322    23445667889999977666554    345667999999975542           1223


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.+|.+.+.+++.++.+   .|+++++++||.+.++.
T Consensus       149 ~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~  189 (245)
T PRK12936        149 QANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAM  189 (245)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCch
Confidence            568999999999999998876   68999999999987654

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.89  E-value=4.9e-22  Score=175.55  Aligned_cols=185  Identities=23%  Similarity=0.301  Sum_probs=141.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCcchhhhhhhhhCC--------CCCceEEEEccCC------CHH
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFP--------EPGRLQFIYADLG------DAK  135 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~--------~~~~~~~~~~Dl~------d~~  135 (296)
                      ++|++||||||+|.+++++|+.+- .+|+|+.|... .+.+.+.+++...        ...+++.+.+|+.      +..
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s-~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~   79 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQS-DEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSER   79 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCC-HHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHH
Confidence            479999999999999999999874 59999998543 3333333333222        2368999999998      345


Q ss_pred             HHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCC----
Q 022471          136 AVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE----  211 (296)
Q Consensus       136 ~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~----  211 (296)
                      .++++.  ..+|.|||||+..+.   ...+.+....|+.||..+++.+.....|.+.|+||.+++........+++    
T Consensus        80 ~~~~La--~~vD~I~H~gA~Vn~---v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~  154 (382)
T COG3320          80 TWQELA--ENVDLIIHNAALVNH---VFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEI  154 (382)
T ss_pred             HHHHHh--hhcceEEecchhhcc---cCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccc
Confidence            777777  569999999997643   23566788899999999999999888888999999998764432222211    


Q ss_pred             CC-----CCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCC
Q 022471          212 TP-----QAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEA  262 (296)
Q Consensus       212 ~~-----~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~  262 (296)
                      .+     ..+.+.|+.||+++|.+++..... |++++++|||+|-|....+.+...
T Consensus       155 ~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~tG~~n~~  209 (382)
T COG3320         155 SPTRNVGQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSRTGALNTR  209 (382)
T ss_pred             cccccccCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCccCccccc
Confidence            11     234689999999999999998875 999999999999998876554433

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.89  E-value=4.9e-22  Score=173.01  Aligned_cols=167  Identities=17%  Similarity=0.100  Sum_probs=128.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+++||||+|+||++++++|+++|++|++++|+....+...+.+    . +.++.++++|++|.+++.+++++     ++
T Consensus         3 k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~----~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (257)
T PRK07074          3 RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADAL----G-DARFVPVACDLTDAASLAAALANAAAERGP   77 (257)
T ss_pred             CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----c-CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            78999999999999999999999999999998654433332222    1 24688899999999999887765     47


Q ss_pred             CcEEEEcccccCcCCCC----cChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~~~----~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +|+||||||........    +.....+++|+.++..+++++    ++.+.++||++||...+..            ...
T Consensus        78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~------------~~~  145 (257)
T PRK07074         78 VDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA------------LGH  145 (257)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC------------CCC
Confidence            99999999975433322    222345668888877766655    4556679999999654311            123


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..|+.+|.+.+.+++.++.+   +|+++++++||.++++.
T Consensus       146 ~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~  185 (257)
T PRK07074        146 PAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQA  185 (257)
T ss_pred             cccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcch
Confidence            57999999999999999977   58999999999999885

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.89  E-value=3.1e-22  Score=174.36  Aligned_cols=171  Identities=13%  Similarity=0.058  Sum_probs=128.7

Q ss_pred             EEEEEcCCChhhHHHHHHHHh----CCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----
Q 022471           72 HVLVTGGAGYIGSHAALRLLK----DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (296)
                      +++||||++|||++++++|++    .|++|++++|+....++..+.++... .+.++.++.+|++|.+++++++++    
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   80 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAER-SGLRVVRVSLDLGAEAGLEQLLKALREL   80 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcC-CCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence            689999999999999999997    79999999987655444444443321 134688899999999999887754    


Q ss_pred             -C----CCcEEEEcccccCcC-C-C-----CcChHHHHHHHHHHHHH----HHHHHHHcC--CCEEEEEcccccccCCCC
Q 022471          144 -N----AFDAVMHFAAVAYVG-E-S-----TLDPLKYYHNITSNTLV----VLESMARHG--VDTLIYSSTCATYGEPEK  205 (296)
Q Consensus       144 -~----~~D~vi~~Ag~~~~~-~-~-----~~~~~~~~~~n~~~t~~----ll~~~~~~~--~~riV~~SS~~~~g~~~~  205 (296)
                       +    +.|+||||||..... . .     .+...+.+++|+.++..    +++.+++.+  .++||++||...+     
T Consensus        81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~-----  155 (256)
T TIGR01500        81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAI-----  155 (256)
T ss_pred             cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhC-----
Confidence             1    136999999974321 1 1     23445688999999554    555555442  3689999997654     


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          206 MPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       206 ~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                            .+.+....|+.||++.+.+++.++.|   .|+++++++||+|-.+.
T Consensus       156 ------~~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~  201 (256)
T TIGR01500       156 ------QPFKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDM  201 (256)
T ss_pred             ------CCCCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchH
Confidence                  23345678999999999999999887   68999999999997763

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.6e-22  Score=171.76  Aligned_cols=166  Identities=22%  Similarity=0.152  Sum_probs=132.4

Q ss_pred             EEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-CCCcEEEEc
Q 022471           74 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDAVMHF  152 (296)
Q Consensus        74 lVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~vi~~  152 (296)
                      +||||+||||++++++|+++|++|++++|+........+.++    .+.+++++.+|++|.+++.+++++ +++|+||||
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~   76 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALG----GGAPVRTAALDITDEAAVDAFFAEAGPFDHVVIT   76 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----cCCceEEEEccCCCHHHHHHHHHhcCCCCEEEEC
Confidence            699999999999999999999999999986433322222221    135688999999999999999876 679999999


Q ss_pred             ccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 022471          153 AAVAYVGE----STLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (296)
Q Consensus       153 Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e  228 (296)
                      ||......    ..+...+.+++|+.++..+.++....+.++||++||.+.+.           +.++.+.|+.+|.+.+
T Consensus        77 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~-----------~~~~~~~Y~~sK~a~~  145 (230)
T PRK07041         77 AADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVR-----------PSASGVLQGAINAALE  145 (230)
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcC-----------CCCcchHHHHHHHHHH
Confidence            99754432    23445667889999999988866655668999999988762           3345788999999999


Q ss_pred             HHHHHhhhc-CCCcEEEEecCeeecCC
Q 022471          229 DIILDFSKN-SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       229 ~~~~~~~~~-~gi~~~~lrpg~v~Gp~  254 (296)
                      .+++.++.+ .++++++++||.+-++.
T Consensus       146 ~~~~~la~e~~~irv~~i~pg~~~t~~  172 (230)
T PRK07041        146 ALARGLALELAPVRVNTVSPGLVDTPL  172 (230)
T ss_pred             HHHHHHHHHhhCceEEEEeecccccHH
Confidence            999999988 46999999999987653

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.89  E-value=5.6e-22  Score=172.86  Aligned_cols=166  Identities=16%  Similarity=0.113  Sum_probs=124.0

Q ss_pred             cEEEEEcC--CChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           71 THVLVTGG--AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        71 k~vlVTGa--sG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      |+++||||  ++|||.+++++|+++|++|++++|+..  .+..+.+.+..  +.++.++++|++|.+++++++++     
T Consensus         8 k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~--~~~~~~~~~~~--~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   83 (256)
T PRK07889          8 KRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRA--LRLTERIAKRL--PEPAPVLELDVTNEEHLASLADRVREHV   83 (256)
T ss_pred             CEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccc--hhHHHHHHHhc--CCCCcEEeCCCCCHHHHHHHHHHHHHHc
Confidence            89999999  899999999999999999999987431  12222222221  13577899999999999888765     


Q ss_pred             CCCcEEEEcccccCc----CC----CCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYV----GE----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEE  211 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~----~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~  211 (296)
                      +++|++|||||+...    ..    ..+...+.+++|+.++..    +++.|++  .++||++|+....           
T Consensus        84 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~~~~-----------  150 (256)
T PRK07889         84 DGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFDATV-----------  150 (256)
T ss_pred             CCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeecccc-----------
Confidence            689999999997532    11    223334568899998555    4455543  3689998864321           


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       212 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                       +.+.+..|+.||++.+.+++.++.|   +||++++|+||.|..+.
T Consensus       151 -~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~  195 (256)
T PRK07889        151 -AWPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLA  195 (256)
T ss_pred             -cCCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChh
Confidence             2234678999999999999999987   78999999999998864

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.89  E-value=2.4e-22  Score=162.57  Aligned_cols=165  Identities=18%  Similarity=0.166  Sum_probs=131.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      -+||||||++|||.+++++|.+.|-+|++++|+.....++.+.       .+.+....||+.|.++.+++++.     ..
T Consensus         6 nTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~-------~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~   78 (245)
T COG3967           6 NTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE-------NPEIHTEVCDVADRDSRRELVEWLKKEYPN   78 (245)
T ss_pred             cEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc-------CcchheeeecccchhhHHHHHHHHHhhCCc
Confidence            7999999999999999999999999999999866444333322       36788889999999988887765     67


Q ss_pred             CcEEEEcccccCcC------CCCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVG------ESTLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~------~~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +++||||||+...-      ...++.++.+.+|+.++..    +++.+.++....||++||.-.+           .|..
T Consensus        79 lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLaf-----------vPm~  147 (245)
T COG3967          79 LNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAF-----------VPMA  147 (245)
T ss_pred             hheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEecccccc-----------Cccc
Confidence            99999999985432      2334445677889998554    5666666666789999997665           3444


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGS  253 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp  253 (296)
                      ....|+++|++...++.+++.+   .+++|.-+.|+.|-.+
T Consensus       148 ~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         148 STPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             ccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            4678999999999999999876   6899999999999986

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.89  E-value=4e-22  Score=174.73  Aligned_cols=171  Identities=18%  Similarity=0.156  Sum_probs=122.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC-CCcchhhhhhhhhCCCCCceEEEEccCCCHHHH----HHHhhc--
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIYADLGDAKAV----NKFFSE--  143 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v----~~~~~~--  143 (296)
                      ++++||||+||||++++++|+++|++|++++|+. ...+...+.+...  .+.++.++.+|++|.+++    +++++.  
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~   79 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNAR--RPNSAVTCQADLSNSATLFSRCEAIIDACF   79 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhc--cCCceEEEEccCCCchhhHHHHHHHHHHHH
Confidence            5899999999999999999999999999887543 2222222222211  124577889999998755    333322  


Q ss_pred             ---CCCcEEEEcccccCcCCCC----c-----------ChHHHHHHHHHHHHHHHHHHH----Hc------CCCEEEEEc
Q 022471          144 ---NAFDAVMHFAAVAYVGEST----L-----------DPLKYYHNITSNTLVVLESMA----RH------GVDTLIYSS  195 (296)
Q Consensus       144 ---~~~D~vi~~Ag~~~~~~~~----~-----------~~~~~~~~n~~~t~~ll~~~~----~~------~~~riV~~S  195 (296)
                         +++|+||||||........    +           ...+.+++|+.++..+++++.    +.      ..++||++|
T Consensus        80 ~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~  159 (267)
T TIGR02685        80 RAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLC  159 (267)
T ss_pred             HccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEeh
Confidence               5799999999975432211    1           244678999998766655443    22      124788888


Q ss_pred             ccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          196 TCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       196 S~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      |....           .+.++..+|+.||++.+.+++.++.|   .|+++++|+||.+..|.
T Consensus       160 s~~~~-----------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~  210 (267)
T TIGR02685       160 DAMTD-----------QPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPD  210 (267)
T ss_pred             hhhcc-----------CCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCcc
Confidence            86543           23455789999999999999999988   79999999999987663

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.89  E-value=9.5e-22  Score=170.24  Aligned_cols=172  Identities=15%  Similarity=0.141  Sum_probs=128.5

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCC--CHHHHHHHhhc---
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG--DAKAVNKFFSE---  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--d~~~v~~~~~~---  143 (296)
                      .+|+|+||||+|+||.+++++|+++|++|++++|+.....+..+.+++..  ..++.++.+|++  +.++++++++.   
T Consensus        11 ~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945         11 KDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAG--GPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcC--CCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            34899999999999999999999999999999987544444444443321  235677788886  66666655543   


Q ss_pred             --CCCcEEEEcccccCc-----CCCCcChHHHHHHHHHHHHHHHHH----HHHcCCCEEEEEcccccccCCCCCCCCCCC
Q 022471          144 --NAFDAVMHFAAVAYV-----GESTLDPLKYYHNITSNTLVVLES----MARHGVDTLIYSSTCATYGEPEKMPITEET  212 (296)
Q Consensus       144 --~~~D~vi~~Ag~~~~-----~~~~~~~~~~~~~n~~~t~~ll~~----~~~~~~~riV~~SS~~~~g~~~~~~~~e~~  212 (296)
                        +++|+||||||....     ....+..++.+++|+.++..++++    +.+.+.++||++||...+           .
T Consensus        89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~-----------~  157 (247)
T PRK08945         89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGR-----------Q  157 (247)
T ss_pred             HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhc-----------C
Confidence              579999999997433     122344566788999996665554    456677899999997654           1


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecC
Q 022471          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGS  253 (296)
Q Consensus       213 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp  253 (296)
                      +.....+|+.||++.+.+++.++.+   .++++++++||.+-++
T Consensus       158 ~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~  201 (247)
T PRK08945        158 GRANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTA  201 (247)
T ss_pred             CCCCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCc
Confidence            2234668999999999999999877   5899999999998765

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.89  E-value=9.9e-22  Score=171.78  Aligned_cols=201  Identities=14%  Similarity=0.133  Sum_probs=143.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----CCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NAF  146 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~~  146 (296)
                      ++++||||+|+||.+++++|+++|++|++++|+.....+..+.+    ..+.++.++.+|++|.++++++++.    +++
T Consensus         6 ~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i   81 (263)
T PRK09072          6 KRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL----PYPGRHRWVVADLTSEAGREAVLARAREMGGI   81 (263)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH----hcCCceEEEEccCCCHHHHHHHHHHHHhcCCC
Confidence            89999999999999999999999999999998654433333222    1235788999999999998887653    579


Q ss_pred             cEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEcccccccCCCCCCCCCCCCCCCCC
Q 022471          147 DAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMA----RHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (296)
Q Consensus       147 D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~----~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (296)
                      |+||||||......    ..+...+.+++|+.++..+++.+.    +.+.+++|++||...+.           +.....
T Consensus        82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~  150 (263)
T PRK09072         82 NVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSI-----------GYPGYA  150 (263)
T ss_pred             CEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCc-----------CCCCcc
Confidence            99999999754432    223345577899999777666554    44557899998865431           223467


Q ss_pred             hHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCCCCCCCC---CCCcccccccccHHHHHHHHhCCCC
Q 022471          219 PYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDPEGRLGE---APRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       219 ~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      .|+.+|.+.+.+++.++.+   .+++++++.||.+.++........   ...........+...++..+.++.+
T Consensus       151 ~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~va~~i~~~~~~~~~  224 (263)
T PRK09072        151 SYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQALNRALGNAMDDPEDVAAAVLQAIEKERA  224 (263)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhcccccccccCCCCCHHHHHHHHHHHHhCCCC
Confidence            8999999999999999876   689999999999987642211000   0000011112566667777776655

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=8e-22  Score=170.21  Aligned_cols=171  Identities=16%  Similarity=0.147  Sum_probs=130.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEE-ecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIV-DNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      +|+++||||+|+||++++++|+++|++|+++ +|+.....+..+.+..   .+.++.++.+|++|.+++.+++++     
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKE---EGGDAIAVKADVSSEEDVENLVEQIVEKF   81 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh---cCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            4899999999999999999999999999998 7765443333333322   235688999999999999887754     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHH----HHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLES----MARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~----~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +++|+|||+||......    ..+..+..+++|+.++..+++.    +.+.+.+++|++||...+..           ..
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~-----------~~  150 (247)
T PRK05565         82 GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIG-----------AS  150 (247)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccC-----------CC
Confidence            47999999999764322    2233456788999996665544    44556678999999765421           22


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ....|+.+|.+.+.+++.++.+   .|+++++++||.+.++.
T Consensus       151 ~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~  192 (247)
T PRK05565        151 CEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEM  192 (247)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCcc
Confidence            3568999999999999998876   69999999999997764

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.89  E-value=6.6e-22  Score=169.98  Aligned_cols=169  Identities=18%  Similarity=0.123  Sum_probs=131.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      ++++||||+|+||++++++|+++|++|++++|++.+..+..+.+.+   . .+++++.+|++|.+++.+++++     ++
T Consensus         7 ~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~---~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (237)
T PRK07326          7 KVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNN---K-GNVLGLAADVRDEADVQRAVDAIVAAFGG   82 (237)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhc---c-CcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            8999999999999999999999999999999865443333333322   1 4688899999999999888764     47


Q ss_pred             CcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHH---cCCCEEEEEcccccccCCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMAR---HGVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~---~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (296)
                      +|+|||+||......    ..+...+.+++|+.++..+++++.+   .+.+++|++||...+.           +..+..
T Consensus        83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~-----------~~~~~~  151 (237)
T PRK07326         83 LDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTN-----------FFAGGA  151 (237)
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhcc-----------CCCCCc
Confidence            999999999764432    2233456788899998776666543   3457899999976542           233467


Q ss_pred             hHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          219 PYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       219 ~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      .|+.+|++.+.+++.++.+   .|+++++++||.+.++.
T Consensus       152 ~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~  190 (237)
T PRK07326        152 AYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHF  190 (237)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcc
Confidence            8999999999999998755   69999999999998865

>PLN00015 protochlorophyllide reductase

Probab=99.89  E-value=4e-22  Score=178.42  Aligned_cols=176  Identities=14%  Similarity=0.104  Sum_probs=126.9

Q ss_pred             EEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CCCc
Q 022471           74 LVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NAFD  147 (296)
Q Consensus        74 lVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~~D  147 (296)
                      +||||++|||.+++++|+++| ++|++++|+....++..+   ++...+.++.++.+|++|.+++++++++     +++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~---~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD   77 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAK---SAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLD   77 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH---HhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCC
Confidence            699999999999999999999 999999876443332222   2222234678899999999999888764     5799


Q ss_pred             EEEEcccccCcC-----CCCcChHHHHHHHHHH----HHHHHHHHHHcC--CCEEEEEcccccccCCC---CCC---C--
Q 022471          148 AVMHFAAVAYVG-----ESTLDPLKYYHNITSN----TLVVLESMARHG--VDTLIYSSTCATYGEPE---KMP---I--  208 (296)
Q Consensus       148 ~vi~~Ag~~~~~-----~~~~~~~~~~~~n~~~----t~~ll~~~~~~~--~~riV~~SS~~~~g~~~---~~~---~--  208 (296)
                      +||||||+....     ...+..+..+++|+.+    ++.+++.|++.+  .++||++||...+-...   ..+   +  
T Consensus        78 ~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~  157 (308)
T PLN00015         78 VLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGD  157 (308)
T ss_pred             EEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhh
Confidence            999999975321     1334456788999999    445677777665  57999999976541100   000   0  


Q ss_pred             --------C--------CCCCCCCCChHHHHHHHHHHHHHHhhhc----CCCcEEEEecCeeec
Q 022471          209 --------T--------EETPQAPINPYGKAKKMAEDIILDFSKN----SDMAVMILRYFNVIG  252 (296)
Q Consensus       209 --------~--------e~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~gi~~~~lrpg~v~G  252 (296)
                              .        ...+..+...|+.||++.+.+++.++++    .|+++++++||+|..
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~  221 (308)
T PLN00015        158 LRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIAT  221 (308)
T ss_pred             hhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccC
Confidence                    0        0012235678999999988888888876    479999999999964

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.89  E-value=6.9e-22  Score=172.26  Aligned_cols=172  Identities=16%  Similarity=0.157  Sum_probs=132.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCe-EEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      +|+++||||+|+||++++++|+++|++ |++++|+..+.....+.+.+   .+.++.++.+|+++.+++.++++.     
T Consensus         6 ~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK06198          6 GKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEA---LGAKAVFVQADLSDVEDCRRVVAAADEAF   82 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHh---cCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            389999999999999999999999999 99998865443333333322   235678899999999999888764     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHH----HHcC-CCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESM----ARHG-VDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~----~~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                      +++|+||||||......    ..+.....+++|+.++..+++.+    .+.+ .+++|++||...++.           .
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~-----------~  151 (260)
T PRK06198         83 GRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGG-----------Q  151 (260)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccC-----------C
Confidence            57999999999754332    22333456889999977766555    3333 368999999877632           2


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      +....|+.+|.+.+.+++.++.+   .+++++.++||+++++..
T Consensus       152 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~  195 (260)
T PRK06198        152 PFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGE  195 (260)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcch
Confidence            33678999999999999999877   579999999999999863

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.89  E-value=8.4e-22  Score=175.07  Aligned_cols=171  Identities=12%  Similarity=-0.040  Sum_probs=121.8

Q ss_pred             ccEEEEEcC--CChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhh-------CCCC---CceEEEEccC--CCH-
Q 022471           70 VTHVLVTGG--AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQEL-------FPEP---GRLQFIYADL--GDA-  134 (296)
Q Consensus        70 ~k~vlVTGa--sG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-------~~~~---~~~~~~~~Dl--~d~-  134 (296)
                      +|++|||||  ++|||+++|++|+++|++|++ +|.....++....+.+.       ...+   .....+.+|+  ++. 
T Consensus         9 gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   87 (303)
T PLN02730          9 GKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTPE   87 (303)
T ss_pred             CCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCccc
Confidence            499999999  899999999999999999988 66544444433333210       0111   1245678898  333 


Q ss_pred             -----------------HHHHHHhhc-----CCCcEEEEcccccCc--CC----CCcChHHHHHHHHHHHHH----HHHH
Q 022471          135 -----------------KAVNKFFSE-----NAFDAVMHFAAVAYV--GE----STLDPLKYYHNITSNTLV----VLES  182 (296)
Q Consensus       135 -----------------~~v~~~~~~-----~~~D~vi~~Ag~~~~--~~----~~~~~~~~~~~n~~~t~~----ll~~  182 (296)
                                       +++++++++     +++|+||||||....  .+    ..+++...+++|+.+...    +++.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~  167 (303)
T PLN02730         88 DVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPI  167 (303)
T ss_pred             cCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                             366766654     689999999975321  22    344556678899999444    5566


Q ss_pred             HHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC-ChHHHHHHHHHHHHHHhhhc----CCCcEEEEecCeeecCC
Q 022471          183 MARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSKN----SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       183 ~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~-~~Y~~sK~~~e~~~~~~~~~----~gi~~~~lrpg~v~Gp~  254 (296)
                      |++.  ++||++||....           .+.+.. ..|+.||++.+.+++.++.|    +||++++|.||.|..+.
T Consensus       168 m~~~--G~II~isS~a~~-----------~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~  231 (303)
T PLN02730        168 MNPG--GASISLTYIASE-----------RIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRA  231 (303)
T ss_pred             HhcC--CEEEEEechhhc-----------CCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCch
Confidence            6543  799999997654           122223 47999999999999999986    47999999999998764

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.88  E-value=1.2e-21  Score=168.75  Aligned_cols=164  Identities=18%  Similarity=0.117  Sum_probs=131.4

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      +.|.|+|||+-+|.|..+|++|.++|+.|.+.+..+...+.+..    ... .++...++.|++++++++++.+.     
T Consensus        28 ~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~----~~~-s~rl~t~~LDVT~~esi~~a~~~V~~~l  102 (322)
T KOG1610|consen   28 SDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRG----ETK-SPRLRTLQLDVTKPESVKEAAQWVKKHL  102 (322)
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhh----hhc-CCcceeEeeccCCHHHHHHHHHHHHHhc
Confidence            33889999999999999999999999999998844433333222    221 36788889999999999888754     


Q ss_pred             --CCCcEEEEcccccCc-CC----CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCC
Q 022471          144 --NAFDAVMHFAAVAYV-GE----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET  212 (296)
Q Consensus       144 --~~~D~vi~~Ag~~~~-~~----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~  212 (296)
                        .++-.||||||+... ++    ..++....+++|..|    |+.+++.+++.. +|||++||...-           .
T Consensus       103 ~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~GR-----------~  170 (322)
T KOG1610|consen  103 GEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLGR-----------V  170 (322)
T ss_pred             ccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEecccccC-----------c
Confidence              569999999996532 22    445556678899999    666778887776 699999997653           4


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCe
Q 022471          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFN  249 (296)
Q Consensus       213 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~  249 (296)
                      +.+...+|+.||+++|.++..+++|   +|++|.+|-||.
T Consensus       171 ~~p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~  210 (322)
T KOG1610|consen  171 ALPALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGF  210 (322)
T ss_pred             cCcccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCc
Confidence            5556889999999999999999998   899999999994

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.88  E-value=3.4e-21  Score=166.17  Aligned_cols=170  Identities=17%  Similarity=0.132  Sum_probs=128.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-cchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG-NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      |+++||||+|+||+++++.|+++|++|+++.|+... .....+.++   ..+.++.++.+|++|.+++.+++++     .
T Consensus         6 ~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (248)
T PRK05557          6 KVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIG---ALGGKALAVQGDVSDAESVERAVDEAKAEFG   82 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHH---hcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            899999999999999999999999999888875432 122222222   2235788899999999999887764     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMAR----HGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~----~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||......    ..+..++.++.|+.++..+++++.+    .+.+++|++||...+           .+...
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~-----------~~~~~  151 (248)
T PRK05557         83 GVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGL-----------MGNPG  151 (248)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccC-----------cCCCC
Confidence            7999999999755432    2233455678899998877766654    456789999996433           11234


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.+|.+.+.+++.++.+   .++++++++||.+.++.
T Consensus       152 ~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~  192 (248)
T PRK05557        152 QANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDM  192 (248)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcc
Confidence            678999999999999988765   68999999999987654

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.88  E-value=6.2e-22  Score=161.06  Aligned_cols=155  Identities=18%  Similarity=0.262  Sum_probs=122.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      |+|+||||+++||.+++++|+++|. .|++++|+ .+.+...+.+.++...+.++.++++|+++.+++++++++     +
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~-~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRS-EDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFG   79 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESS-CHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeec-ccccccccccccccccccccccccccccccccccccccccccccc
Confidence            6899999999999999999999965 67777765 112223333333332347899999999999999988876     7


Q ss_pred             CCcEEEEcccccCcCCCCcC----hHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChH
Q 022471          145 AFDAVMHFAAVAYVGESTLD----PLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~~~~----~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (296)
                      .+|+||||||........+.    ..+.+++|+.+...+.+++.+.+.++||++||....           .+.+....|
T Consensus        80 ~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~-----------~~~~~~~~Y  148 (167)
T PF00106_consen   80 PLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGV-----------RGSPGMSAY  148 (167)
T ss_dssp             SESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGT-----------SSSTTBHHH
T ss_pred             cccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhc-----------cCCCCChhH
Confidence            89999999998775443333    345788999998888888887667899999998775           345567899


Q ss_pred             HHHHHHHHHHHHHhhhc
Q 022471          221 GKAKKMAEDIILDFSKN  237 (296)
Q Consensus       221 ~~sK~~~e~~~~~~~~~  237 (296)
                      +.+|++.+.+++.+++|
T Consensus       149 ~askaal~~~~~~la~e  165 (167)
T PF00106_consen  149 SASKAALRGLTQSLAAE  165 (167)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHh
Confidence            99999999999999876

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.88  E-value=8.3e-22  Score=168.39  Aligned_cols=169  Identities=15%  Similarity=0.177  Sum_probs=127.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc---CCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NAF  146 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---~~~  146 (296)
                      ||+|+||||+|+||++++++|+++|++|++++|+..+...    +++.    .++.+..+|++|.++++++++.   .++
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~----~~~~----~~~~~~~~D~~d~~~~~~~~~~~~~~~i   72 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTA----LQAL----PGVHIEKLDMNDPASLDQLLQRLQGQRF   72 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHH----HHhc----cccceEEcCCCCHHHHHHHHHHhhcCCC
Confidence            4789999999999999999999999999999987654322    2221    3567889999999999888765   479


Q ss_pred             cEEEEcccccCcC--C----CCcChHHHHHHHHHHHHHHHHHHHHc---CCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          147 DAVMHFAAVAYVG--E----STLDPLKYYHNITSNTLVVLESMARH---GVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       147 D~vi~~Ag~~~~~--~----~~~~~~~~~~~n~~~t~~ll~~~~~~---~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      |+||||||.....  .    ..++....+++|+.++..+++++.+.   +.++++++||.....  .      ..+..+.
T Consensus        73 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~--~------~~~~~~~  144 (225)
T PRK08177         73 DLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSV--E------LPDGGEM  144 (225)
T ss_pred             CEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCcccc--c------cCCCCCc
Confidence            9999999985321  1    22334456778888877776665432   336889998854321  1      1122345


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..|+.+|++.+.+++.++.+   ++++++.++||.+-.+.
T Consensus       145 ~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~  184 (225)
T PRK08177        145 PLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDM  184 (225)
T ss_pred             cchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCC
Confidence            67999999999999999877   68999999999998875

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.7e-21  Score=191.33  Aligned_cols=173  Identities=23%  Similarity=0.263  Sum_probs=132.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHH--hCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH------HHHHHHhh
Q 022471           71 THVLVTGGAGYIGSHAALRLL--KDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA------KAVNKFFS  142 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~v~~~~~  142 (296)
                      |+||||||||+||++++++|+  ++|++|++++|+... ....+..... . ..+++++.+|++|.      +.++++  
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~-~-~~~v~~~~~Dl~~~~~~~~~~~~~~l--   75 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALAAYW-G-ADRVVPLVGDLTEPGLGLSEADIAEL--   75 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHHHhc-C-CCcEEEEecccCCccCCcCHHHHHHh--
Confidence            579999999999999999999  589999999985321 2222111111 1 14688999999984      455554  


Q ss_pred             cCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCC---CCCCCCh
Q 022471          143 ENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET---PQAPINP  219 (296)
Q Consensus       143 ~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~---~~~~~~~  219 (296)
                       .++|+||||||.....   ......+++|+.++.++++++.+.+.+++|++||.++||.... +.+|+.   +..+.++
T Consensus        76 -~~~D~Vih~Aa~~~~~---~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~-~~~e~~~~~~~~~~~~  150 (657)
T PRK07201         76 -GDIDHVVHLAAIYDLT---ADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEG-VFREDDFDEGQGLPTP  150 (657)
T ss_pred             -cCCCEEEECceeecCC---CCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccC-ccccccchhhcCCCCc
Confidence             4799999999975432   2456678899999999999999998899999999999975433 334432   2334578


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          220 YGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       220 Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                      |+.||.++|.++++   ..+++++++||++||||...
T Consensus       151 Y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~G~~~~  184 (657)
T PRK07201        151 YHRTKFEAEKLVRE---ECGLPWRVYRPAVVVGDSRT  184 (657)
T ss_pred             hHHHHHHHHHHHHH---cCCCcEEEEcCCeeeecCCC
Confidence            99999999999875   36899999999999998754

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.88  E-value=1.8e-21  Score=183.02  Aligned_cols=174  Identities=16%  Similarity=0.123  Sum_probs=130.4

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhC----C--CCCceEEEEccCCCHHHHHHHhh
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELF----P--EPGRLQFIYADLGDAKAVNKFFS  142 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~--~~~~~~~~~~Dl~d~~~v~~~~~  142 (296)
                      .+++||||||+||||++++++|+++|++|++++|+..+.....+.+.+..    .  ...++.++.+|++|.+++++++ 
T Consensus        79 ~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL-  157 (576)
T PLN03209         79 DEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL-  157 (576)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh-
Confidence            34899999999999999999999999999999987655443333332210    0  0135889999999999999988 


Q ss_pred             cCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHH
Q 022471          143 ENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGK  222 (296)
Q Consensus       143 ~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~  222 (296)
                       +++|+||||||....  ...+....+++|+.++.++++++++.+++|||++||.+++....    .+ ........|..
T Consensus       158 -ggiDiVVn~AG~~~~--~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~----p~-~~~~sk~~~~~  229 (576)
T PLN03209        158 -GNASVVICCIGASEK--EVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGF----PA-AILNLFWGVLC  229 (576)
T ss_pred             -cCCCEEEEccccccc--cccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCc----cc-cchhhHHHHHH
Confidence             789999999986532  11234567889999999999999999999999999987631110    00 11122345777


Q ss_pred             HHHHHHHHHHHhhhcCCCcEEEEecCeeecCCC
Q 022471          223 AKKMAEDIILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       223 sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                      .|..+|..+..    .|+++++||||.++++.+
T Consensus       230 ~KraaE~~L~~----sGIrvTIVRPG~L~tp~d  258 (576)
T PLN03209        230 WKRKAEEALIA----SGLPYTIVRPGGMERPTD  258 (576)
T ss_pred             HHHHHHHHHHH----cCCCEEEEECCeecCCcc
Confidence            78877777654    799999999999998743

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.88  E-value=1.8e-21  Score=190.57  Aligned_cols=170  Identities=19%  Similarity=0.223  Sum_probs=129.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+||||||+||||++++++|+++|++|++++|+....+...+.+..... ..++..+++|++|.+++++++++     +
T Consensus       414 gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~-~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g  492 (676)
T TIGR02632       414 RRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFG-AGRAVALKMDVTDEQAVKAAFADVALAYG  492 (676)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcC-CCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            48999999999999999999999999999999865443333333322211 13577899999999999988865     5


Q ss_pred             CCcEEEEcccccCcCCCCc----ChHHHHHHHHHHHH----HHHHHHHHcC-CCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSNTL----VVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~~~----~~~~~~~~n~~~t~----~ll~~~~~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||........+    .....+++|+.+..    .+++.|++.+ .++||++||...+           .+.+
T Consensus       493 ~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~-----------~~~~  561 (676)
T TIGR02632       493 GVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAV-----------YAGK  561 (676)
T ss_pred             CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhc-----------CCCC
Confidence            8999999999765433322    33445677887744    4556666654 4689999996543           1233


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeee
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVI  251 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~  251 (296)
                      ...+|+.||++.+.+++.++.+   .|+++++|+||.|+
T Consensus       562 ~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~  600 (676)
T TIGR02632       562 NASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVL  600 (676)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCcee
Confidence            4679999999999999999887   68999999999997

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.88  E-value=1.2e-21  Score=160.88  Aligned_cols=174  Identities=19%  Similarity=0.176  Sum_probs=131.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc------
Q 022471           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------  143 (296)
                      +.++||||++|||..|+++|++. |.++++..++.  .+.+.++++.......+++.++.|+++.+++.+++++      
T Consensus         4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~--~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg   81 (249)
T KOG1611|consen    4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARD--PEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVG   81 (249)
T ss_pred             ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCC--hHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcc
Confidence            67999999999999999999985 77777765432  2222444444444458999999999999999888866      


Q ss_pred             -CCCcEEEEcccccCcCC-----CCcChHHHHHHHHHH----HHHHHHHHHHcCCC-----------EEEEEcccccccC
Q 022471          144 -NAFDAVMHFAAVAYVGE-----STLDPLKYYHNITSN----TLVVLESMARHGVD-----------TLIYSSTCATYGE  202 (296)
Q Consensus       144 -~~~D~vi~~Ag~~~~~~-----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~-----------riV~~SS~~~~g~  202 (296)
                       .++|++|||||+...-.     ..+...+.+++|..+    ++.+++++++...+           .||++||.+.-  
T Consensus        82 ~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s--  159 (249)
T KOG1611|consen   82 SDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS--  159 (249)
T ss_pred             cCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc--
Confidence             68999999999854322     223345678899988    66678888765433           79999885532  


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          203 PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       203 ~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      .      ......+..+|..||.|...++++++-+   .++-++.++||+|-.-.
T Consensus       160 ~------~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDM  208 (249)
T KOG1611|consen  160 I------GGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDM  208 (249)
T ss_pred             c------CCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCC
Confidence            1      1123456889999999999999999877   67889999999997643

>PRK06484 short chain dehydrogenase; Validated

Probab=99.88  E-value=1.1e-21  Score=187.73  Aligned_cols=167  Identities=17%  Similarity=0.164  Sum_probs=130.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+++||||++|||.+++++|+++|++|++++|+..+.++.   .++.   +.++.++++|++|.+++++++++     ++
T Consensus         6 k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (520)
T PRK06484          6 RVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARER---ADSL---GPDHHALAMDVSDEAQIREGFEQLHREFGR   79 (520)
T ss_pred             eEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHh---CCceeEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            8999999999999999999999999999999765433322   2222   24677899999999999888865     67


Q ss_pred             CcEEEEcccccCc------CCCCcChHHHHHHHHHHHHHH----HHHHHHcCCC-EEEEEcccccccCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYV------GESTLDPLKYYHNITSNTLVV----LESMARHGVD-TLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       146 ~D~vi~~Ag~~~~------~~~~~~~~~~~~~n~~~t~~l----l~~~~~~~~~-riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                      +|+||||||....      ....++.+..+++|+.++..+    ++.|++.+.+ +||++||....           .+.
T Consensus        80 iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~-----------~~~  148 (520)
T PRK06484         80 IDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGL-----------VAL  148 (520)
T ss_pred             CCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccC-----------CCC
Confidence            9999999997321      123344566888999986654    4555454444 99999997654           223


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +....|+.+|++.+.+++.++.|   .+++++.++||.|..+.
T Consensus       149 ~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~  191 (520)
T PRK06484        149 PKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQM  191 (520)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchh
Confidence            34678999999999999999987   68999999999997765

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.88  E-value=5.8e-22  Score=171.88  Aligned_cols=169  Identities=15%  Similarity=0.108  Sum_probs=125.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      ||+++||||+||||++++++|+++|++|++++|+..+  ...+..+.   .+.+++++++|++|.+++++++++     .
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~--~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   75 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENK--ELTKLAEQ---YNSNLTFHSLDLQDVHELETNFNEILSSIQ   75 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchH--HHHHHHhc---cCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            5799999999999999999999999999999986421  12211111   135688999999999999888865     1


Q ss_pred             --CC--cEEEEcccccCcC-----CCCcChHHHHHHHHHH----HHHHHHHHHHc-CCCEEEEEcccccccCCCCCCCCC
Q 022471          145 --AF--DAVMHFAAVAYVG-----ESTLDPLKYYHNITSN----TLVVLESMARH-GVDTLIYSSTCATYGEPEKMPITE  210 (296)
Q Consensus       145 --~~--D~vi~~Ag~~~~~-----~~~~~~~~~~~~n~~~----t~~ll~~~~~~-~~~riV~~SS~~~~g~~~~~~~~e  210 (296)
                        +.  +++|||||.....     ...+...+.+++|+.+    ++.+++.+++. +.++||++||..++          
T Consensus        76 ~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~----------  145 (251)
T PRK06924         76 EDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAK----------  145 (251)
T ss_pred             cccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhc----------
Confidence              12  2899999975331     1233445567778887    44555666654 34689999997654          


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc-----CCCcEEEEecCeeecCC
Q 022471          211 ETPQAPINPYGKAKKMAEDIILDFSKN-----SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       211 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~gi~~~~lrpg~v~Gp~  254 (296)
                       .+.++...|+.+|++.+.+++.++.+     .+++++.|+||.+-.+.
T Consensus       146 -~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~  193 (251)
T PRK06924        146 -NPYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNM  193 (251)
T ss_pred             -CCCCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHh
Confidence             34456789999999999999999866     47999999999987764

>PRK08017 oxidoreductase; Provisional

Probab=99.88  E-value=2e-21  Score=168.85  Aligned_cols=199  Identities=19%  Similarity=0.153  Sum_probs=141.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc------C
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------N  144 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------~  144 (296)
                      |+|+||||+|+||+++++.|+++|++|++++|+..+.+    .+..     .+++++.+|++|.+++.++++.      +
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~----~~~~-----~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   73 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVA----RMNS-----LGFTGILLDLDDPESVERAADEVIALTDN   73 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhH----HHHh-----CCCeEEEeecCCHHHHHHHHHHHHHhcCC
Confidence            68999999999999999999999999999987653322    1111     2467889999999888776643      4


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|.+|||||......    ..+..++.++.|+.++..    +++.+++.+.+++|++||...+           .+...
T Consensus        74 ~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~-----------~~~~~  142 (256)
T PRK08017         74 RLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGL-----------ISTPG  142 (256)
T ss_pred             CCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccc-----------cCCCC
Confidence            6899999999754322    333445678899998665    5788877877899999996544           12334


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCCCCCCCCC-CC----c-----ccccccccHHHHHHHHhC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDPEGRLGEA-PR----P-----ELREHGRISGACFDAARG  283 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~~~~~~~~-~~----~-----~~~~~~~~i~~~~~~~~~  283 (296)
                      .+.|+.||++.+.+.+.++.+   .++++++++||.+.++......... ..    +     .+-..-.+...+...+..
T Consensus       143 ~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~  222 (256)
T PRK08017        143 RGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALES  222 (256)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhC
Confidence            678999999999999887654   7899999999988765321110000 00    0     001122566677777777


Q ss_pred             CCCcce
Q 022471          284 IIAGLK  289 (296)
Q Consensus       284 ~~~~~~  289 (296)
                      +++...
T Consensus       223 ~~~~~~  228 (256)
T PRK08017        223 PKPKLR  228 (256)
T ss_pred             CCCCce
Confidence            776543

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.88  E-value=2.1e-21  Score=178.88  Aligned_cols=163  Identities=21%  Similarity=0.245  Sum_probs=128.6

Q ss_pred             CCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcch--hhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcC-
Q 022471           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIG--AVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSEN-  144 (296)
Q Consensus        68 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~-  144 (296)
                      ..+++|+||||||+||++++++|+++|++|++++|+......  ..+....   ...+++++.+|++|.+++.++++.. 
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~---~~~~v~~v~~Dl~d~~~l~~~~~~~~  134 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKK---ELPGAEVVFGDVTDADSLRKVLFSEG  134 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhh---hcCCceEEEeeCCCHHHHHHHHHHhC
Confidence            345899999999999999999999999999999986543221  0111111   1246889999999999999998642 


Q ss_pred             -CCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHH
Q 022471          145 -AFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKA  223 (296)
Q Consensus       145 -~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~s  223 (296)
                       ++|+||||++....     ...+.+++|+.++.++++++++.+.++||++||.+++.              |...|..+
T Consensus       135 ~~~D~Vi~~aa~~~~-----~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~--------------p~~~~~~s  195 (390)
T PLN02657        135 DPVDVVVSCLASRTG-----GVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK--------------PLLEFQRA  195 (390)
T ss_pred             CCCcEEEECCccCCC-----CCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC--------------cchHHHHH
Confidence             69999999985321     12345788999999999999999999999999987652              34579999


Q ss_pred             HHHHHHHHHHhhhcCCCcEEEEecCeeecCC
Q 022471          224 KKMAEDIILDFSKNSDMAVMILRYFNVIGSD  254 (296)
Q Consensus       224 K~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~  254 (296)
                      |...|..++.  .+.+++++++||+.+||+.
T Consensus       196 K~~~E~~l~~--~~~gl~~tIlRp~~~~~~~  224 (390)
T PLN02657        196 KLKFEAELQA--LDSDFTYSIVRPTAFFKSL  224 (390)
T ss_pred             HHHHHHHHHh--ccCCCCEEEEccHHHhccc
Confidence            9999988765  3479999999999999853

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.88  E-value=5.7e-21  Score=162.87  Aligned_cols=167  Identities=18%  Similarity=0.096  Sum_probs=127.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc---CCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NAF  146 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---~~~  146 (296)
                      ||+++||||+|+||++++++|+++|++|++++|+....+    .+..     ..++++.+|++|.+++++++++   .++
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~----~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~~   71 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALA----ALQA-----LGAEALALDVADPASVAGLAWKLDGEAL   71 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHH----HHHh-----ccceEEEecCCCHHHHHHHHHHhcCCCC
Confidence            579999999999999999999999999999997643322    2221     2356889999999999887543   469


Q ss_pred             cEEEEcccccCcC------CCCcChHHHHHHHHHHHHHHHHHHHH---cCCCEEEEEccccc-ccCCCCCCCCCCCCCCC
Q 022471          147 DAVMHFAAVAYVG------ESTLDPLKYYHNITSNTLVVLESMAR---HGVDTLIYSSTCAT-YGEPEKMPITEETPQAP  216 (296)
Q Consensus       147 D~vi~~Ag~~~~~------~~~~~~~~~~~~n~~~t~~ll~~~~~---~~~~riV~~SS~~~-~g~~~~~~~~e~~~~~~  216 (296)
                      |++|||||.....      ...++++..++.|+.++..+++++.+   ...+++|++||... ++..         +..+
T Consensus        72 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---------~~~~  142 (222)
T PRK06953         72 DAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDA---------TGTT  142 (222)
T ss_pred             CEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccc---------cCCC
Confidence            9999999975321      13445567899999998888877764   23458999988654 3311         1112


Q ss_pred             CChHHHHHHHHHHHHHHhhhc-CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN-SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~-~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.+|.+.+.+++.++.+ .+++++.++||.+..+.
T Consensus       143 ~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~  181 (222)
T PRK06953        143 GWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDM  181 (222)
T ss_pred             ccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCC
Confidence            346999999999999999877 58999999999999875

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.88  E-value=1.7e-21  Score=175.04  Aligned_cols=150  Identities=19%  Similarity=0.240  Sum_probs=121.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+|+||||||+||++++++|+++|++|++++|+..+..    .+.     ..+++++.+|++|++++.+++  .++|+||
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~----~l~-----~~~v~~v~~Dl~d~~~l~~al--~g~d~Vi   69 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKAS----FLK-----EWGAELVYGDLSLPETLPPSF--KGVTAII   69 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhh----hHh-----hcCCEEEECCCCCHHHHHHHH--CCCCEEE
Confidence            58999999999999999999999999999998643221    111     136889999999999999999  5799999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  230 (296)
                      |+++...     .++...+++|+.++.++++++++.+++|+|++||....             ..+.++|..+|..+|.+
T Consensus        70 ~~~~~~~-----~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~-------------~~~~~~~~~~K~~~e~~  131 (317)
T CHL00194         70 DASTSRP-----SDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAE-------------QYPYIPLMKLKSDIEQK  131 (317)
T ss_pred             ECCCCCC-----CCccchhhhhHHHHHHHHHHHHHcCCCEEEEecccccc-------------ccCCChHHHHHHHHHHH
Confidence            9986421     23445778899999999999999999999999995432             01235789999999988


Q ss_pred             HHHhhhcCCCcEEEEecCeeecC
Q 022471          231 ILDFSKNSDMAVMILRYFNVIGS  253 (296)
Q Consensus       231 ~~~~~~~~gi~~~~lrpg~v~Gp  253 (296)
                      ++.    .+++++++||+.+|+.
T Consensus       132 l~~----~~l~~tilRp~~~~~~  150 (317)
T CHL00194        132 LKK----SGIPYTIFRLAGFFQG  150 (317)
T ss_pred             HHH----cCCCeEEEeecHHhhh
Confidence            754    7899999999988864

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.87  E-value=1.2e-21  Score=165.69  Aligned_cols=180  Identities=28%  Similarity=0.263  Sum_probs=154.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhC-CCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +|++||||-||.-|++|++.|+++|++|+.+.|+........-.+.+.. ....+++.+.+|++|...+.+++++-++|-
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdE   81 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDE   81 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchh
Confidence            4899999999999999999999999999999886433222211222221 123468899999999999999999889999


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCC--CEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHH
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV--DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKM  226 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~--~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~  226 (296)
                      |+|+|+.++.+.+.+.|+.+.+++..||.++|++++-.+.  -||...||+..||.....|.+|+.|..|.+||+.+|..
T Consensus        82 IYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKlY  161 (345)
T COG1089          82 IYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLY  161 (345)
T ss_pred             heeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHHH
Confidence            9999999999999999999999999999999999998764  37888999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhcCCCcEEEEecCe
Q 022471          227 AEDIILDFSKNSDMAVMILRYFN  249 (296)
Q Consensus       227 ~e~~~~~~~~~~gi~~~~lrpg~  249 (296)
                      +...+..+.+.+|+-++.=...|
T Consensus       162 a~W~tvNYResYgl~AcnGILFN  184 (345)
T COG1089         162 AYWITVNYRESYGLFACNGILFN  184 (345)
T ss_pred             HHheeeehHhhcCceeecceeec
Confidence            99999999888998877644444

>PRK08324 short chain dehydrogenase; Validated

Probab=99.87  E-value=3.1e-21  Score=189.58  Aligned_cols=170  Identities=24%  Similarity=0.294  Sum_probs=132.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+|+||||+|+||++++++|+++|++|++++|+........+.+.   .. .++.++.+|++|.+++++++++     +
T Consensus       422 gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~---~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~~g  497 (681)
T PRK08324        422 GKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELG---GP-DRALGVACDVTDEAAVQAAFEEAALAFG  497 (681)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHh---cc-CcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999986544333332222   11 4688999999999999887764     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHH----HHHHHHcCC-CEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVV----LESMARHGV-DTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~l----l~~~~~~~~-~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||......    ..+.....+++|+.++..+    ++.+++.+. ++||++||...+.           +.+
T Consensus       498 ~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~-----------~~~  566 (681)
T PRK08324        498 GVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVN-----------PGP  566 (681)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccC-----------CCC
Confidence            8999999999765443    2334455788999997777    455555554 7999999976542           233


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeee-cCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVI-GSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~-Gp~  254 (296)
                      +..+|+.||.+.+.+++.++.+   .|+++++++|+.|| ++.
T Consensus       567 ~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~  609 (681)
T PRK08324        567 NFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSG  609 (681)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCc
Confidence            4678999999999999999877   57999999999998 553

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.87  E-value=4.3e-21  Score=160.89  Aligned_cols=152  Identities=14%  Similarity=0.104  Sum_probs=121.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-CCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~v  149 (296)
                      |+++||||+||||++++++|+++ ++|++++|+..                    .+++|++|.+++++++++ +++|+|
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~--------------------~~~~D~~~~~~~~~~~~~~~~id~l   59 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG--------------------DVQVDITDPASIRALFEKVGKVDAV   59 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC--------------------ceEecCCChHHHHHHHHhcCCCCEE
Confidence            47999999999999999999999 99999887431                    358999999999998876 589999


Q ss_pred             EEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHH
Q 022471          150 MHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKA  223 (296)
Q Consensus       150 i~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~s  223 (296)
                      |||||......    ..++..+.+++|+.++.++++++.+.  ..++|+++||....           .+.+....|+.|
T Consensus        60 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~-----------~~~~~~~~Y~~s  128 (199)
T PRK07578         60 VSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSD-----------EPIPGGASAATV  128 (199)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccC-----------CCCCCchHHHHH
Confidence            99999754433    23345556789999987777665442  23689999986643           233457789999


Q ss_pred             HHHHHHHHHHhhhc--CCCcEEEEecCeeecCC
Q 022471          224 KKMAEDIILDFSKN--SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       224 K~~~e~~~~~~~~~--~gi~~~~lrpg~v~Gp~  254 (296)
                      |++.+.+++.++.|  .|++++.|+||.+-.+.
T Consensus       129 K~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~  161 (199)
T PRK07578        129 NGALEGFVKAAALELPRGIRINVVSPTVLTESL  161 (199)
T ss_pred             HHHHHHHHHHHHHHccCCeEEEEEcCCcccCch
Confidence            99999999999886  68999999999987763

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.87  E-value=6.1e-21  Score=164.08  Aligned_cols=170  Identities=14%  Similarity=0.114  Sum_probs=126.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      ++|+||||+|+||+++++.|+++|++|++++|++.......+.+..    ..+++++++|+++.+++++++++     ++
T Consensus         6 ~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (238)
T PRK05786          6 KKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSK----YGNIHYVVGDVSSTESARNVIEKAAKVLNA   81 (238)
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh----cCCeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            8999999999999999999999999999999865433322222221    13678899999999999887754     56


Q ss_pred             CcEEEEcccccCcCC--CCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCCCCCCCChHH
Q 022471          146 FDAVMHFAAVAYVGE--STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYG  221 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~--~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~  221 (296)
                      +|.+||++|......  ..+.....++.|+.+...+++.+.+.  ..+++|++||.....          .+.++...|+
T Consensus        82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~----------~~~~~~~~Y~  151 (238)
T PRK05786         82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIY----------KASPDQLSYA  151 (238)
T ss_pred             CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcc----------cCCCCchHHH
Confidence            899999998643221  11233456778888866655554432  236899999865421          1233467899


Q ss_pred             HHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          222 KAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       222 ~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      .||.+.+.+++.++.+   .|+++++++||+++++.
T Consensus       152 ~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~  187 (238)
T PRK05786        152 VAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDF  187 (238)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCC
Confidence            9999999999999877   59999999999999974

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.87  E-value=7.2e-21  Score=163.45  Aligned_cols=168  Identities=18%  Similarity=0.146  Sum_probs=129.1

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC-CcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CCC
Q 022471           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR-GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NAF  146 (296)
Q Consensus        73 vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~~  146 (296)
                      |||||++|+||++++++|+++|++|++++|+.. ......+.++   ..+.++.++.+|++|.++++++++.     +++
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   77 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELK---AYGVKALGVVCDVSDREDVKAVVEEIEEELGPI   77 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHH---hcCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            589999999999999999999999999987642 2122222222   2235688999999999999887754     579


Q ss_pred             cEEEEcccccCcC----CCCcChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcccccccCCCCCCCCCCCCCCCCC
Q 022471          147 DAVMHFAAVAYVG----ESTLDPLKYYHNITSNTLVVLESMAR----HGVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (296)
Q Consensus       147 D~vi~~Ag~~~~~----~~~~~~~~~~~~n~~~t~~ll~~~~~----~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (296)
                      |+|||+||.....    ...+..++.++.|+.++..+++.+.+    .+.+++|++||.+.+.           ..++.+
T Consensus        78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~-----------g~~~~~  146 (239)
T TIGR01830        78 DILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLM-----------GNAGQA  146 (239)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccC-----------CCCCCc
Confidence            9999999975432    23345567888999998888877754    4567999999965431           122357


Q ss_pred             hHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          219 PYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       219 ~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      .|+.+|.+.+.+++.++.+   .|+++++++||.+.++.
T Consensus       147 ~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~  185 (239)
T TIGR01830       147 NYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDM  185 (239)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChh
Confidence            8999999999999998876   69999999999987763

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.87  E-value=6.5e-21  Score=162.54  Aligned_cols=165  Identities=15%  Similarity=0.084  Sum_probs=125.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-CCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~  148 (296)
                      ||+++||||+|+||++++++|+++ ++|++++|+....+    .+.+.   ...++++++|++|.++++++++. +++|+
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~----~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~id~   74 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLD----ELAAE---LPGATPFPVDLTDPEAIAAAVEQLGRLDV   74 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHH----HHHHH---hccceEEecCCCCHHHHHHHHHhcCCCCE
Confidence            479999999999999999999999 99999998643221    11111   13578899999999999998865 47999


Q ss_pred             EEEcccccCcCCC----CcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChH
Q 022471          149 VMHFAAVAYVGES----TLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (296)
Q Consensus       149 vi~~Ag~~~~~~~----~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (296)
                      |||+||.......    .+...+.++.|+.+    +..+++.+++. .+++|++||...++           +..+..+|
T Consensus        75 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~-----------~~~~~~~y  142 (227)
T PRK08219         75 LVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLR-----------ANPGWGSY  142 (227)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcC-----------cCCCCchH
Confidence            9999997543321    22334467888888    55566666665 46999999987663           23346789


Q ss_pred             HHHHHHHHHHHHHhhhc-CC-CcEEEEecCeeecCC
Q 022471          221 GKAKKMAEDIILDFSKN-SD-MAVMILRYFNVIGSD  254 (296)
Q Consensus       221 ~~sK~~~e~~~~~~~~~-~g-i~~~~lrpg~v~Gp~  254 (296)
                      +.+|.+.+.+++.++.+ .+ ++++.++||.+.++.
T Consensus       143 ~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~  178 (227)
T PRK08219        143 AASKFALRALADALREEEPGNVRVTSVHPGRTDTDM  178 (227)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchH
Confidence            99999999999998776 44 899999999988764

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.87  E-value=3.5e-21  Score=156.51  Aligned_cols=163  Identities=14%  Similarity=0.050  Sum_probs=128.3

Q ss_pred             cEEEEEcC-CChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc------
Q 022471           71 THVLVTGG-AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (296)
Q Consensus        71 k~vlVTGa-sG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------  143 (296)
                      |+|+|||+ +||||.+++++|+++|+.|+++.|+.+.-..+..        ..++...+.|+++++++.++..+      
T Consensus         8 k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~--------~~gl~~~kLDV~~~~~V~~v~~evr~~~~   79 (289)
T KOG1209|consen    8 KKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAI--------QFGLKPYKLDVSKPEEVVTVSGEVRANPD   79 (289)
T ss_pred             CeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHH--------hhCCeeEEeccCChHHHHHHHHHHhhCCC
Confidence            78888875 5899999999999999999999876544332221        14578889999999998877654      


Q ss_pred             CCCcEEEEcccccCcCCCCc----ChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGESTL----DPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~~~~----~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +++|++|||||..-..+..+    .-+..+++|+.|    ++.+.+.+.+.. +.||++.|..+|           .|.+
T Consensus        80 Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaK-GtIVnvgSl~~~-----------vpfp  147 (289)
T KOG1209|consen   80 GKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAK-GTIVNVGSLAGV-----------VPFP  147 (289)
T ss_pred             CceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHcc-ceEEEecceeEE-----------eccc
Confidence            78999999999865544333    335578899998    444554444543 699999998887           4566


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGS  253 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp  253 (296)
                      ..+.|.+||+|...+++.+.-|   +|++|+.+-+|.|-..
T Consensus       148 f~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~  188 (289)
T KOG1209|consen  148 FGSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATD  188 (289)
T ss_pred             hhhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecc
Confidence            6789999999999999999888   8999999999988664

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.87  E-value=1.6e-20  Score=153.24  Aligned_cols=169  Identities=16%  Similarity=0.157  Sum_probs=129.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      ++++||||+|+||.+++++|+++|+ .|++++|+..........++++...+.++.++.+|+++.+++++++++     +
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999999997 677788765444332221222222245778899999999988887654     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChH
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (296)
                      ++|.|||+||......    ..++....++.|+.++..+++++++.+.+++|++||...+           .+......|
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~-----------~~~~~~~~y  149 (180)
T smart00822       81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGV-----------LGNPGQANY  149 (180)
T ss_pred             CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHh-----------cCCCCchhh
Confidence            6899999999754322    2344566788999999999999988777899999996553           122346789


Q ss_pred             HHHHHHHHHHHHHhhhcCCCcEEEEecCeee
Q 022471          221 GKAKKMAEDIILDFSKNSDMAVMILRYFNVI  251 (296)
Q Consensus       221 ~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~  251 (296)
                      +.+|.+.+.+++.++. .+++++.+.||.+-
T Consensus       150 ~~sk~~~~~~~~~~~~-~~~~~~~~~~g~~~  179 (180)
T smart00822      150 AAANAFLDALAAHRRA-RGLPATSINWGAWA  179 (180)
T ss_pred             HHHHHHHHHHHHHHHh-cCCceEEEeecccc
Confidence            9999999999977654 78999999998764

It uses NADPH to reduce the keto group to a hydroxy group.

>PLN00016 RNA-binding protein; Provisional

Probab=99.87  E-value=6.3e-21  Score=175.39  Aligned_cols=158  Identities=18%  Similarity=0.238  Sum_probs=120.4

Q ss_pred             CccEEEEE----cCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhh----hhhhhhCCCCCceEEEEccCCCHHHHHHH
Q 022471           69 GVTHVLVT----GGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAV----KVLQELFPEPGRLQFIYADLGDAKAVNKF  140 (296)
Q Consensus        69 ~~k~vlVT----GasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~  140 (296)
                      .+|+||||    ||||+||++++++|+++||+|++++|+........    ....++.  ..+++++.+|+.|   +.++
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d---~~~~  125 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS--SAGVKTVWGDPAD---VKSK  125 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh--hcCceEEEecHHH---HHhh
Confidence            34789999    99999999999999999999999998754321110    0001111  1347888999977   4444


Q ss_pred             hhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChH
Q 022471          141 FSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (296)
Q Consensus       141 ~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (296)
                      +...++|+|||+++.                +..++.++++++++.++++||++||.++|+.....+..|+.+..|..  
T Consensus       126 ~~~~~~d~Vi~~~~~----------------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~--  187 (378)
T PLN00016        126 VAGAGFDVVYDNNGK----------------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKA--  187 (378)
T ss_pred             hccCCccEEEeCCCC----------------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcc--
Confidence            433579999999762                13467889999999999999999999999876666677766655543  


Q ss_pred             HHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCC
Q 022471          221 GKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       221 ~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                        +|..+|.+++.    .+++++++||+++|||+.
T Consensus       188 --sK~~~E~~l~~----~~l~~~ilRp~~vyG~~~  216 (378)
T PLN00016        188 --GHLEVEAYLQK----LGVNWTSFRPQYIYGPGN  216 (378)
T ss_pred             --hHHHHHHHHHH----cCCCeEEEeceeEECCCC
Confidence              89999988754    689999999999999974

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.86  E-value=9.4e-21  Score=167.63  Aligned_cols=166  Identities=23%  Similarity=0.254  Sum_probs=121.3

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEEEc
Q 022471           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHF  152 (296)
Q Consensus        73 vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi~~  152 (296)
                      ||||||+|+||++++++|+++|++|++++|+........           ...  ..|+.. ..+.+.+  .++|+|||+
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~--~~~~~~-~~~~~~~--~~~D~Vvh~   64 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK-----------WEG--YKPWAP-LAESEAL--EGADAVINL   64 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc-----------cee--eecccc-cchhhhc--CCCCEEEEC
Confidence            689999999999999999999999999998765432111           001  112222 2334444  579999999


Q ss_pred             ccccCcC--CCCcChHHHHHHHHHHHHHHHHHHHHcCCC--EEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 022471          153 AAVAYVG--ESTLDPLKYYHNITSNTLVVLESMARHGVD--TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (296)
Q Consensus       153 Ag~~~~~--~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~--riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e  228 (296)
                      ||.....  ...+.....+++|+.++.++++++++.+.+  ++|++||..+|+.....+++|+.+..+.+.|+..|...|
T Consensus        65 a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e  144 (292)
T TIGR01777        65 AGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWE  144 (292)
T ss_pred             CCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHH
Confidence            9975432  122344567889999999999999998863  466667777898766667888876656667777777777


Q ss_pred             HHHHHhhhcCCCcEEEEecCeeecCCC
Q 022471          229 DIILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       229 ~~~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                      .....+. +.+++++++||++||||++
T Consensus       145 ~~~~~~~-~~~~~~~ilR~~~v~G~~~  170 (292)
T TIGR01777       145 EAAQAAE-DLGTRVVLLRTGIVLGPKG  170 (292)
T ss_pred             HHhhhch-hcCCceEEEeeeeEECCCc
Confidence            7766543 4689999999999999963

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.86  E-value=2.5e-20  Score=160.10  Aligned_cols=165  Identities=13%  Similarity=0.099  Sum_probs=120.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-CCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D  147 (296)
                      |+|+||||+||||++++++|+++|  +.|+...|+....         .  ...++.++++|++|.++++++.+. +++|
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~---------~--~~~~~~~~~~Dls~~~~~~~~~~~~~~id   69 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD---------F--QHDNVQWHALDVTDEAEIKQLSEQFTQLD   69 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc---------c--ccCceEEEEecCCCHHHHHHHHHhcCCCC
Confidence            589999999999999999999985  5565555433211         0  125788899999999998887654 6899


Q ss_pred             EEEEcccccCcC------CCC----cChHHHHHHHHHHHH----HHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCC
Q 022471          148 AVMHFAAVAYVG------EST----LDPLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (296)
Q Consensus       148 ~vi~~Ag~~~~~------~~~----~~~~~~~~~n~~~t~----~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~  213 (296)
                      +||||||.....      ..+    +.....+++|+.++.    .+++.|++.+.++++++||...-  ..      ..+
T Consensus        70 ~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~--~~------~~~  141 (235)
T PRK09009         70 WLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGS--IS------DNR  141 (235)
T ss_pred             EEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccc--cc------cCC
Confidence            999999986421      111    223356778888854    45565655556789999874321  00      112


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc-----CCCcEEEEecCeeecCC
Q 022471          214 QAPINPYGKAKKMAEDIILDFSKN-----SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       214 ~~~~~~Y~~sK~~~e~~~~~~~~~-----~gi~~~~lrpg~v~Gp~  254 (296)
                      .++...|+.+|++.+.+++.++.|     .+++++.+.||.+.++.
T Consensus       142 ~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~  187 (235)
T PRK09009        142 LGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTAL  187 (235)
T ss_pred             CCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCC
Confidence            345678999999999999999976     48999999999998875

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.86  E-value=3.7e-20  Score=160.31  Aligned_cols=188  Identities=12%  Similarity=0.071  Sum_probs=127.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +|+++||||+||||++++++|+++|++|++++|+....  ...    .. . ....++.+|++|.+++.+.+  +++|++
T Consensus        14 ~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~--~~~----~~-~-~~~~~~~~D~~~~~~~~~~~--~~iDil   83 (245)
T PRK12367         14 GKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINN--SES----ND-E-SPNEWIKWECGKEESLDKQL--ASLDVL   83 (245)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhh--hhh----hc-c-CCCeEEEeeCCCHHHHHHhc--CCCCEE
Confidence            38999999999999999999999999999999865211  111    11 1 12257789999999998877  689999


Q ss_pred             EEcccccCcC-CCCcChHHHHHHHHHHHHHHHHH----HHHc---CCCEEEEEcccccccCCCCCCCCCCCCCCCCChHH
Q 022471          150 MHFAAVAYVG-ESTLDPLKYYHNITSNTLVVLES----MARH---GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYG  221 (296)
Q Consensus       150 i~~Ag~~~~~-~~~~~~~~~~~~n~~~t~~ll~~----~~~~---~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~  221 (296)
                      |||||..... ...++..+.+++|+.++..++++    |++.   +.+.++..||.+.+.           + .....|+
T Consensus        84 VnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~-----------~-~~~~~Y~  151 (245)
T PRK12367         84 ILNHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQ-----------P-ALSPSYE  151 (245)
T ss_pred             EECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccC-----------C-CCCchhH
Confidence            9999975332 23456677899999997666554    4432   123344445543321           1 1356799


Q ss_pred             HHHHHHHHHH---HHhhhc---CCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCCc
Q 022471          222 KAKKMAEDII---LDFSKN---SDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAG  287 (296)
Q Consensus       222 ~sK~~~e~~~---~~~~~~---~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  287 (296)
                      +||++.+.+.   ++++.+   .++.++.+.||.+..+.....   ...     +..+...+++++.+++..
T Consensus       152 aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~~~---~~~-----~~~vA~~i~~~~~~~~~~  215 (245)
T PRK12367        152 ISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNPIG---IMS-----ADFVAKQILDQANLGLYL  215 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCccC---CCC-----HHHHHHHHHHHHhcCCce
Confidence            9999986543   333322   789999999999866532110   011     126777788888887773

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.86  E-value=2.5e-20  Score=161.96  Aligned_cols=170  Identities=21%  Similarity=0.201  Sum_probs=121.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC-HHHHHHHhhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~D~  148 (296)
                      +|+|+||||||+||++++++|+++|++|+++.|+..+..   +.+    ....++.++.+|++| .+++.+.+. .++|+
T Consensus        17 ~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~---~~~----~~~~~~~~~~~Dl~d~~~~l~~~~~-~~~d~   88 (251)
T PLN00141         17 TKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAK---TSL----PQDPSLQIVRADVTEGSDKLVEAIG-DDSDA   88 (251)
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHH---Hhc----ccCCceEEEEeeCCCCHHHHHHHhh-cCCCE
Confidence            489999999999999999999999999999887653221   111    112468899999998 456666552 26999


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCC-CCCCCChHHHHHHHH
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET-PQAPINPYGKAKKMA  227 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~-~~~~~~~Y~~sK~~~  227 (296)
                      |||++|.....    ++...++.|..++.++++++++.+.++||++||.++|+.....+..+.. ...+...|..+|..+
T Consensus        89 vi~~~g~~~~~----~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~  164 (251)
T PLN00141         89 VICATGFRRSF----DPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQA  164 (251)
T ss_pred             EEECCCCCcCC----CCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHH
Confidence            99999864211    1223457888999999999999988999999999998753322211110 001122344567777


Q ss_pred             HHHHHHhhhcCCCcEEEEecCeeecCCC
Q 022471          228 EDIILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       228 e~~~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                      |.+++.    .|+++++||||+++++..
T Consensus       165 e~~l~~----~gi~~~iirpg~~~~~~~  188 (251)
T PLN00141        165 EKYIRK----SGINYTIVRPGGLTNDPP  188 (251)
T ss_pred             HHHHHh----cCCcEEEEECCCccCCCC
Confidence            766553    789999999999998754

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.86  E-value=2.9e-20  Score=159.98  Aligned_cols=172  Identities=19%  Similarity=0.183  Sum_probs=142.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      .+|+|||||+|||..++.++..+|++|.++.|+.++..++.+.++-.... ..+.+..+|+.|.+++...+++     +.
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~-~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~  112 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQV-EDVSYKSVDVIDYDSVSKVIEELRDLEGP  112 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhcc-ceeeEeccccccHHHHHHHHhhhhhccCC
Confidence            68999999999999999999999999999999888877777776655433 3377999999999999999876     57


Q ss_pred             CcEEEEcccccCcCCCCcCh----HHHHHHHHHHHHHHHH----HHHHcC-CCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLVVLE----SMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~~~~~~----~~~~~~n~~~t~~ll~----~~~~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      +|.+|||||...++..++..    +..+++|..|+.+++.    +|++.. .++|+.+||....           .+..+
T Consensus       113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~-----------~~i~G  181 (331)
T KOG1210|consen  113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAM-----------LGIYG  181 (331)
T ss_pred             cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhh-----------cCccc
Confidence            99999999987766544443    4467899999777554    444444 4699999997654           34566


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      .++|+.+|.+...+++++++|   +|+.++...|+.+-.|+
T Consensus       182 ysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpG  222 (331)
T KOG1210|consen  182 YSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPG  222 (331)
T ss_pred             ccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCc
Confidence            899999999999999999998   79999999999999997

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.85  E-value=2.6e-20  Score=152.70  Aligned_cols=194  Identities=20%  Similarity=0.221  Sum_probs=157.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC---eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY---RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (296)
                      +|+|+|||++|-+|++|.+.+.+.|.   +.+..+                        .-.+|+++.++.++++++.++
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~------------------------skd~DLt~~a~t~~lF~~ekP   56 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIG------------------------SKDADLTNLADTRALFESEKP   56 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEec------------------------cccccccchHHHHHHHhccCC
Confidence            48999999999999999999999875   222221                        125899999999999999899


Q ss_pred             cEEEEcccccCc-CCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCC----CCCC-CChH
Q 022471          147 DAVMHFAAVAYV-GESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET----PQAP-INPY  220 (296)
Q Consensus       147 D~vi~~Ag~~~~-~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~----~~~~-~~~Y  220 (296)
                      ..|||.|+.... -.....+.+.+..|+...-+++..+.+.|++++|++.|.++|.+....|++|..    |+.| ...|
T Consensus        57 thVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gY  136 (315)
T KOG1431|consen   57 THVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGY  136 (315)
T ss_pred             ceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHH
Confidence            999999986432 234556778899999999999999999999999999999999988888999864    3333 4579


Q ss_pred             HHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCCcceEEE
Q 022471          221 GKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVCY  292 (296)
Q Consensus       221 ~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  292 (296)
                      +.+|..+.-..++++.++|-..+.+-|.++|||++...+...+..+     .++..+.++-..|.+.++||=
T Consensus       137 syAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlP-----ali~r~h~ak~~gtd~~~VwG  203 (315)
T KOG1431|consen  137 SYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLP-----ALIHRFHEAKRNGTDELTVWG  203 (315)
T ss_pred             HHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchH-----HHHHHHHHHHhcCCceEEEec
Confidence            9999888888899999999999999999999999887655443322     455566677778887788773

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.85  E-value=9.7e-20  Score=150.53  Aligned_cols=151  Identities=24%  Similarity=0.351  Sum_probs=122.3

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEEEc
Q 022471           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHF  152 (296)
Q Consensus        73 vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi~~  152 (296)
                      |+|+||||++|++++++|+++|++|+++.|++.+.+.           ..+++++.+|+.|.+++.+++  .++|+||++
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-----------~~~~~~~~~d~~d~~~~~~al--~~~d~vi~~   67 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-----------SPGVEIIQGDLFDPDSVKAAL--KGADAVIHA   67 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-----------CTTEEEEESCTTCHHHHHHHH--TTSSEEEEC
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-----------ccccccceeeehhhhhhhhhh--hhcchhhhh
Confidence            7999999999999999999999999999987543321           268999999999999999999  589999999


Q ss_pred             ccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 022471          153 AAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIIL  232 (296)
Q Consensus       153 Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~  232 (296)
                      +|....             ....++.+++++++.+.+++|++||..+|...........  ......|...|..+|.+++
T Consensus        68 ~~~~~~-------------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~e~~~~  132 (183)
T PF13460_consen   68 AGPPPK-------------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDED--KPIFPEYARDKREAEEALR  132 (183)
T ss_dssp             CHSTTT-------------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGT--CGGGHHHHHHHHHHHHHHH
T ss_pred             hhhhcc-------------cccccccccccccccccccceeeeccccCCCCCccccccc--ccchhhhHHHHHHHHHHHH
Confidence            974322             1677889999999999999999999999864433211111  1112578899998888775


Q ss_pred             HhhhcCCCcEEEEecCeeecCCC
Q 022471          233 DFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       233 ~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                      .    .+++++++||+.+||+..
T Consensus       133 ~----~~~~~~ivrp~~~~~~~~  151 (183)
T PF13460_consen  133 E----SGLNWTIVRPGWIYGNPS  151 (183)
T ss_dssp             H----STSEEEEEEESEEEBTTS
T ss_pred             h----cCCCEEEEECcEeEeCCC
Confidence            4    699999999999999974

...

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.84  E-value=1.1e-19  Score=173.69  Aligned_cols=186  Identities=15%  Similarity=0.163  Sum_probs=134.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC---eEEEEecCCCCcchhhhhhh-h------------hCCC------CCceEEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY---RVTIVDNLSRGNIGAVKVLQ-E------------LFPE------PGRLQFI  127 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~---~V~~~~r~~~~~~~~~~~~~-~------------~~~~------~~~~~~~  127 (296)
                      +|+|+|||||||||++|++.|++.+.   +|+++.|...... +.+.++ +            ..+.      ..++.++
T Consensus       119 ~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~-a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v  197 (605)
T PLN02503        119 GKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEA-AIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV  197 (605)
T ss_pred             CCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchh-HHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence            48999999999999999999998764   6788888544322 222221 1            1111      2478899


Q ss_pred             EccCCCH------HHHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcccccc
Q 022471          128 YADLGDA------KAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATY  200 (296)
Q Consensus       128 ~~Dl~d~------~~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-~~~riV~~SS~~~~  200 (296)
                      .+|++++      +..+.+.  .++|+|||+|+....   .++.+..+++|+.++.++++++++. ..+++|++||+++|
T Consensus       198 ~GDl~d~~LGLs~~~~~~L~--~~vDiVIH~AA~v~f---~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVy  272 (605)
T PLN02503        198 VGNVCESNLGLEPDLADEIA--KEVDVIINSAANTTF---DERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVN  272 (605)
T ss_pred             EeeCCCcccCCCHHHHHHHH--hcCCEEEECcccccc---ccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceee
Confidence            9999986      3455555  369999999997653   3467788999999999999999886 46789999999999


Q ss_pred             cCCCCC----CCC--C--------------------------------C---C-----------------CCCCCChHHH
Q 022471          201 GEPEKM----PIT--E--------------------------------E---T-----------------PQAPINPYGK  222 (296)
Q Consensus       201 g~~~~~----~~~--e--------------------------------~---~-----------------~~~~~~~Y~~  222 (296)
                      |...+.    ++.  +                                +   .                 -...-+.|..
T Consensus       273 G~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~  352 (605)
T PLN02503        273 GQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVF  352 (605)
T ss_pred             cCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHH
Confidence            875311    111  0                                0   0                 0111378999


Q ss_pred             HHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCC
Q 022471          223 AKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAP  263 (296)
Q Consensus       223 sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~  263 (296)
                      ||+.+|++++...  .+++++++||+.|.+....+..|+-+
T Consensus       353 TK~lAE~lV~~~~--~~LPv~IvRPsiV~st~~eP~pGw~d  391 (605)
T PLN02503        353 TKAMGEMVINSMR--GDIPVVIIRPSVIESTWKDPFPGWME  391 (605)
T ss_pred             HHHHHHHHHHHhc--CCCCEEEEcCCEecccccCCcccccc
Confidence            9999999998654  47999999999996655544444433

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.84  E-value=1.1e-19  Score=157.54  Aligned_cols=168  Identities=17%  Similarity=0.166  Sum_probs=125.3

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC--cchhhhhhhhhCCCC-CceEEEEccCCC-HHHHHHHhhc-
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG--NIGAVKVLQELFPEP-GRLQFIYADLGD-AKAVNKFFSE-  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~-~~~~~~~~Dl~d-~~~v~~~~~~-  143 (296)
                      .+|+|+||||++|||+++|++|+++|++|+++.++...  .+...+...   ... ..+.+..+|+++ .++++.+++. 
T Consensus         4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dvs~~~~~v~~~~~~~   80 (251)
T COG1028           4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK---EAGGGRAAAVAADVSDDEESVEALVAAA   80 (251)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH---hcCCCcEEEEEecCCCCHHHHHHHHHHH
Confidence            34899999999999999999999999999888875543  122222222   111 257778899998 8888877765 


Q ss_pred             ----CCCcEEEEcccccCcC-C----CCcChHHHHHHHHHHHHHHHH----HHHHcCCCEEEEEcccccccCCCCCCCCC
Q 022471          144 ----NAFDAVMHFAAVAYVG-E----STLDPLKYYHNITSNTLVVLE----SMARHGVDTLIYSSTCATYGEPEKMPITE  210 (296)
Q Consensus       144 ----~~~D~vi~~Ag~~~~~-~----~~~~~~~~~~~n~~~t~~ll~----~~~~~~~~riV~~SS~~~~g~~~~~~~~e  210 (296)
                          +++|++|||||..... .    ..+..++.+++|+.+...+..    .++++   +||++||.... .        
T Consensus        81 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~--------  148 (251)
T COG1028          81 EEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-G--------  148 (251)
T ss_pred             HHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-C--------
Confidence                6799999999986431 2    334556688899998555444    33422   99999997653 2        


Q ss_pred             CCCCCC-CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          211 ETPQAP-INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       211 ~~~~~~-~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                         ..+ ..+|+.||++.+.+++.++.+   +||+++.|.||.+-.+.
T Consensus       149 ---~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~  193 (251)
T COG1028         149 ---GPPGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPM  193 (251)
T ss_pred             ---CCCCcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcc
Confidence               222 589999999999999999976   78999999999666543

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.84  E-value=3.1e-21  Score=152.14  Aligned_cols=178  Identities=19%  Similarity=0.163  Sum_probs=138.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-CCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~  148 (296)
                      ++.|++||+.-|||++++++|++.|++|+.+.|++.+...+.+   +.   +.-+..+.+|+++-+.+.+++.. ..+|.
T Consensus         7 G~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~---e~---p~~I~Pi~~Dls~wea~~~~l~~v~pidg   80 (245)
T KOG1207|consen    7 GVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVK---ET---PSLIIPIVGDLSAWEALFKLLVPVFPIDG   80 (245)
T ss_pred             ceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHh---hC---CcceeeeEecccHHHHHHHhhcccCchhh
Confidence            3899999999999999999999999999999986654433322   21   34478899999998888888755 67999


Q ss_pred             EEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHH----HHHcC-CCEEEEEcccccccCCCCCCCCCCCCCCCCCh
Q 022471          149 VMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLES----MARHG-VDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (296)
Q Consensus       149 vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~----~~~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~  219 (296)
                      ++||||+....+    +.+..+..|++|+.+..++.+.    +..+. .+.||++||.+..           .+....+.
T Consensus        81 LVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~-----------R~~~nHtv  149 (245)
T KOG1207|consen   81 LVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASI-----------RPLDNHTV  149 (245)
T ss_pred             hhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcc-----------cccCCceE
Confidence            999999865444    4445556778899885555544    44443 3579999997654           45667899


Q ss_pred             HHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCCCCCCCCCCC
Q 022471          220 YGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDPEGRLGEAPR  264 (296)
Q Consensus       220 Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~~~~~~~~~~  264 (296)
                      |+++|.+.+.+++.++.|   ..|+++.+.|..|+.......|.+.++
T Consensus       150 YcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K  197 (245)
T KOG1207|consen  150 YCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDK  197 (245)
T ss_pred             EeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchh
Confidence            999999999999999998   569999999999998776666555444

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.84  E-value=1.7e-19  Score=169.58  Aligned_cols=167  Identities=14%  Similarity=0.071  Sum_probs=128.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +++++||||+|+||.+++++|+++|++|+++++.. ..++..+...+.     +..++.+|++|.++++++++.     +
T Consensus       210 g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~-~~~~l~~~~~~~-----~~~~~~~Dv~~~~~~~~~~~~~~~~~g  283 (450)
T PRK08261        210 GKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPA-AGEALAAVANRV-----GGTALALDITAPDAPARIAEHLAERHG  283 (450)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCc-cHHHHHHHHHHc-----CCeEEEEeCCCHHHHHHHHHHHHHhCC
Confidence            48999999999999999999999999999998732 222222222221     235788999999999888764     4


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHHc----CCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARH----GVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~----~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||+.....    ..+..+..+++|+.++.++.+++.+.    ..++||++||.+.+.           +...
T Consensus       284 ~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~-----------g~~~  352 (450)
T PRK08261        284 GLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIA-----------GNRG  352 (450)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcC-----------CCCC
Confidence            7999999999765432    33445567889999999988888653    237999999976542           2234


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGS  253 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp  253 (296)
                      ...|+.+|.+.+.+++.++.+   .|++++++.||.+-.+
T Consensus       353 ~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~  392 (450)
T PRK08261        353 QTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQ  392 (450)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcch
Confidence            678999999999999999876   6899999999998654

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.84  E-value=9.3e-20  Score=179.22  Aligned_cols=152  Identities=18%  Similarity=0.166  Sum_probs=121.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      .|+||||||+|+||+++++.|.++|++|...                           .+|++|.+.+.+.+++.++|+|
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~---------------------------~~~l~d~~~v~~~i~~~~pd~V  432 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG---------------------------KGRLEDRSSLLADIRNVKPTHV  432 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEee---------------------------ccccccHHHHHHHHHhhCCCEE
Confidence            3789999999999999999999999987321                           2467888888888877789999


Q ss_pred             EEcccccCc---CCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCC------CCCCCCCCCCCCC-CCh
Q 022471          150 MHFAAVAYV---GESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEP------EKMPITEETPQAP-INP  219 (296)
Q Consensus       150 i~~Ag~~~~---~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~------~~~~~~e~~~~~~-~~~  219 (296)
                      ||+|+....   ..++.++...+++|+.++.++++++++.++ ++|++||.++|+..      ...+++|++++.+ .++
T Consensus       433 ih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~  511 (668)
T PLN02260        433 FNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSF  511 (668)
T ss_pred             EECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC-eEEEEcccceecCCcccccccCCCCCcCCCCCCCCCh
Confidence            999997642   235668888999999999999999999987 56778888887632      1246777765544 589


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCC
Q 022471          220 YGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSD  254 (296)
Q Consensus       220 Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~  254 (296)
                      |+.||+++|.+++.+.     +..++|+.++||++
T Consensus       512 Yg~sK~~~E~~~~~~~-----~~~~~r~~~~~~~~  541 (668)
T PLN02260        512 YSKTKAMVEELLREYD-----NVCTLRVRMPISSD  541 (668)
T ss_pred             hhHHHHHHHHHHHhhh-----hheEEEEEEecccC
Confidence            9999999999998863     46677888888654

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.84  E-value=5.3e-20  Score=158.63  Aligned_cols=175  Identities=15%  Similarity=0.166  Sum_probs=142.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHH----HHHHhhcCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKA----VNKFFSENAF  146 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~----v~~~~~~~~~  146 (296)
                      +-++|||||.|||++.+++|+++|.+|++++|+..+.+...+++++...  .++.++..|.++.+.    +++.+++.++
T Consensus        50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~--vev~~i~~Dft~~~~~ye~i~~~l~~~~V  127 (312)
T KOG1014|consen   50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK--VEVRIIAIDFTKGDEVYEKLLEKLAGLDV  127 (312)
T ss_pred             CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC--cEEEEEEEecCCCchhHHHHHHHhcCCce
Confidence            7899999999999999999999999999999999888888888877653  578889999997654    5555555778


Q ss_pred             cEEEEcccccCc--CCCCcChH----HHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          147 DAVMHFAAVAYV--GESTLDPL----KYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       147 D~vi~~Ag~~~~--~~~~~~~~----~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      -+||||+|....  ....+.++    +.+.+|+.+    |+.+++-|.+++.+-||++||.+..           .|.+.
T Consensus       128 gILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~-----------~p~p~  196 (312)
T KOG1014|consen  128 GILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGL-----------IPTPL  196 (312)
T ss_pred             EEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccc-----------ccChh
Confidence            899999998762  22222222    334467766    6778899998888899999997654           56666


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCCCCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDPEGR  258 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~~~~  258 (296)
                      ++.|++||...+.+++.+++|   +||.+-.+-|..|-++.....
T Consensus       197 ~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~  241 (312)
T KOG1014|consen  197 LSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYR  241 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccC
Confidence            899999999999999999988   799999999999998765443

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.83  E-value=6.2e-20  Score=162.98  Aligned_cols=172  Identities=9%  Similarity=-0.058  Sum_probs=111.7

Q ss_pred             ccEEEEEcCC--ChhhHHHHHHHHhCCCeEEEEecCC--------CCcchhhhhhh-------------hhCCCCCceEE
Q 022471           70 VTHVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLS--------RGNIGAVKVLQ-------------ELFPEPGRLQF  126 (296)
Q Consensus        70 ~k~vlVTGas--G~IG~~la~~L~~~G~~V~~~~r~~--------~~~~~~~~~~~-------------~~~~~~~~~~~  126 (296)
                      +|+++||||+  +|||+++|++|+++|++|++.++.+        ....+......             ....+-...+-
T Consensus         8 gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~   87 (299)
T PRK06300          8 GKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTPED   87 (299)
T ss_pred             CCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCCEE
Confidence            4999999995  9999999999999999999976431        00000000000             00000011222


Q ss_pred             EEccCCC--------HHHHHHHhhc-----CCCcEEEEcccccC--cCC----CCcChHHHHHHHHHHHHH----HHHHH
Q 022471          127 IYADLGD--------AKAVNKFFSE-----NAFDAVMHFAAVAY--VGE----STLDPLKYYHNITSNTLV----VLESM  183 (296)
Q Consensus       127 ~~~Dl~d--------~~~v~~~~~~-----~~~D~vi~~Ag~~~--~~~----~~~~~~~~~~~n~~~t~~----ll~~~  183 (296)
                      +.+|+++        .+++++++++     +++|+||||||...  ..+    ..++++..+++|+.+...    +++.|
T Consensus        88 v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m  167 (299)
T PRK06300         88 VPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIM  167 (299)
T ss_pred             eecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence            3333333        1245555543     78999999998642  122    334455677899998555    55555


Q ss_pred             HHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHhhhc----CCCcEEEEecCeeecCC
Q 022471          184 ARHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN-PYGKAKKMAEDIILDFSKN----SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       184 ~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~-~Y~~sK~~~e~~~~~~~~~----~gi~~~~lrpg~v~Gp~  254 (296)
                      ++.  ++||++||....           .+.+... .|+.||++.+.+++.++.|    +||++++|.||.+..+.
T Consensus       168 ~~~--G~ii~iss~~~~-----------~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~  230 (299)
T PRK06300        168 NPG--GSTISLTYLASM-----------RAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRA  230 (299)
T ss_pred             hcC--CeEEEEeehhhc-----------CcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChh
Confidence            443  589999886543           1222233 7999999999999999987    38999999999998764

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.83  E-value=5.2e-19  Score=162.45  Aligned_cols=189  Identities=14%  Similarity=0.107  Sum_probs=128.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +|+|+||||+||||++++++|+++|++|++++|+..+.   .+....   ....+..+.+|++|.+++.+.+  +++|++
T Consensus       178 gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l---~~~~~~---~~~~v~~v~~Dvsd~~~v~~~l--~~IDiL  249 (406)
T PRK07424        178 GKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKI---TLEING---EDLPVKTLHWQVGQEAALAELL--EKVDIL  249 (406)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHhh---cCCCeEEEEeeCCCHHHHHHHh--CCCCEE
Confidence            48999999999999999999999999999998754322   122111   1234678899999999999888  689999


Q ss_pred             EEcccccCcC-CCCcChHHHHHHHHHHHHHHHHH----HHHcCC----CEEEEEcccccccCCCCCCCCCCCCCCCCChH
Q 022471          150 MHFAAVAYVG-ESTLDPLKYYHNITSNTLVVLES----MARHGV----DTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (296)
Q Consensus       150 i~~Ag~~~~~-~~~~~~~~~~~~n~~~t~~ll~~----~~~~~~----~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (296)
                      |||||..... ...++..+.+++|+.++..++++    |++.+.    +.+|++|++. .            .+.....|
T Consensus       250 InnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~-~------------~~~~~~~Y  316 (406)
T PRK07424        250 IINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAE-V------------NPAFSPLY  316 (406)
T ss_pred             EECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcccc-c------------cCCCchHH
Confidence            9999975432 23345567899999997665555    444432    2355665422 1            11224579


Q ss_pred             HHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCCc
Q 022471          221 GKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAG  287 (296)
Q Consensus       221 ~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  287 (296)
                      ++||++.+.++...+.+.++.+..+.||.+..+...  .+ ...     ...+...++..+.+++..
T Consensus       317 ~ASKaAl~~l~~l~~~~~~~~I~~i~~gp~~t~~~~--~~-~~s-----pe~vA~~il~~i~~~~~~  375 (406)
T PRK07424        317 ELSKRALGDLVTLRRLDAPCVVRKLILGPFKSNLNP--IG-VMS-----ADWVAKQILKLAKRDFRN  375 (406)
T ss_pred             HHHHHHHHHHHHHHHhCCCCceEEEEeCCCcCCCCc--CC-CCC-----HHHHHHHHHHHHHCCCCE
Confidence            999999999875444446777777777765443211  00 011     127788888888887773

>PRK05865 hypothetical protein; Provisional

Probab=99.83  E-value=1.6e-19  Score=177.82  Aligned_cols=132  Identities=27%  Similarity=0.364  Sum_probs=112.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+|+||||+|+||++++++|+++|++|++++|+....         .   ..++.++.+|++|.+++.+++  .++|+||
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~---------~---~~~v~~v~gDL~D~~~l~~al--~~vD~VV   66 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS---------W---PSSADFIAADIRDATAVESAM--TGADVVA   66 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh---------c---ccCceEEEeeCCCHHHHHHHH--hCCCEEE
Confidence            5799999999999999999999999999999753211         0   135778999999999999998  4699999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  230 (296)
                      |||+....         .+++|+.++.+++++|++.+.++||++||..                         |.++|.+
T Consensus        67 HlAa~~~~---------~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~-------------------------K~aaE~l  112 (854)
T PRK05865         67 HCAWVRGR---------NDHINIDGTANVLKAMAETGTGRIVFTSSGH-------------------------QPRVEQM  112 (854)
T ss_pred             ECCCcccc---------hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH-------------------------HHHHHHH
Confidence            99985321         5689999999999999999989999999931                         8888887


Q ss_pred             HHHhhhcCCCcEEEEecCeeecCC
Q 022471          231 ILDFSKNSDMAVMILRYFNVIGSD  254 (296)
Q Consensus       231 ~~~~~~~~gi~~~~lrpg~v~Gp~  254 (296)
                      ++.    ++++++++||++||||+
T Consensus       113 l~~----~gl~~vILRp~~VYGP~  132 (854)
T PRK05865        113 LAD----CGLEWVAVRCALIFGRN  132 (854)
T ss_pred             HHH----cCCCEEEEEeceEeCCC
Confidence            754    78999999999999996

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.81  E-value=3.4e-19  Score=153.87  Aligned_cols=161  Identities=19%  Similarity=0.207  Sum_probs=121.8

Q ss_pred             cCC--ChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc------CCCcE
Q 022471           77 GGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------NAFDA  148 (296)
Q Consensus        77 Gas--G~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------~~~D~  148 (296)
                      |++  +|||+++|++|+++|++|++.+|+..+.....+.+.+..+    ..++.+|++|.+++++++++      +++|+
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~----~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~   76 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG----AEVIQCDLSDEESVEALFDEAVERFGGRIDI   76 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT----SEEEESCTTSHHHHHHHHHHHHHHHCSSESE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC----CceEeecCcchHHHHHHHHHHHhhcCCCeEE
Confidence            666  9999999999999999999999876543333444443322    33699999999999988765      78999


Q ss_pred             EEEcccccCc----CCCCc----ChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          149 VMHFAAVAYV----GESTL----DPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       149 vi~~Ag~~~~----~~~~~----~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ||||||....    .+..+    .....+++|+.+...    +++.|.+.  ++||++||....           .+.+.
T Consensus        77 lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~-----------~~~~~  143 (241)
T PF13561_consen   77 LVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQ-----------RPMPG  143 (241)
T ss_dssp             EEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGT-----------SBSTT
T ss_pred             EEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhc-----------ccCcc
Confidence            9999998654    33233    334456677777555    44444443  589999997654           33445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc----CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN----SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~----~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.+|.+.+.+++.++.|    +||++++|.||.+..+.
T Consensus       144 ~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~  185 (241)
T PF13561_consen  144 YSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPM  185 (241)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccc
Confidence            679999999999999999877    48999999999998764

...

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.80  E-value=2.8e-18  Score=181.28  Aligned_cols=181  Identities=22%  Similarity=0.241  Sum_probs=133.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCC----CeEEEEecCCCCcchhhhhhhhhC--------CCCCceEEEEccCCC----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDS----YRVTIVDNLSRGNIGAVKVLQELF--------PEPGRLQFIYADLGD----  133 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~--------~~~~~~~~~~~Dl~d----  133 (296)
                      .++|+||||||+||++++++|++++    ++|+++.|........ +.+....        ....++.++.+|+++    
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~-~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGL-ERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHH-HHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            3799999999999999999999987    7899988865433222 2221110        001368899999974    


Q ss_pred             --HHHHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCC-------
Q 022471          134 --AKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPE-------  204 (296)
Q Consensus       134 --~~~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~-------  204 (296)
                        .+.+.++.  .++|+|||||+.....   .........|+.|+.++++++.+.+.++++|+||.++|+...       
T Consensus      1050 l~~~~~~~l~--~~~d~iiH~Aa~~~~~---~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~ 1124 (1389)
T TIGR03443      1050 LSDEKWSDLT--NEVDVIIHNGALVHWV---YPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDE 1124 (1389)
T ss_pred             cCHHHHHHHH--hcCCEEEECCcEecCc---cCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhh
Confidence              45566665  5799999999976432   233444568999999999999998888999999999986421       


Q ss_pred             -----CCCCCCCCC-----CCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCC
Q 022471          205 -----KMPITEETP-----QAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEG  257 (296)
Q Consensus       205 -----~~~~~e~~~-----~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~  257 (296)
                           ...+.|+.+     ..+.+.|+.||.++|.++..++. .|++++++|||+|||+...+
T Consensus      1125 ~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~-~g~~~~i~Rpg~v~G~~~~g 1186 (1389)
T TIGR03443      1125 LVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK-RGLRGCIVRPGYVTGDSKTG 1186 (1389)
T ss_pred             hhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh-CCCCEEEECCCccccCCCcC
Confidence                 112333322     22346799999999999998766 59999999999999997654

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK12320 hypothetical protein; Provisional

Probab=99.80  E-value=2.6e-18  Score=166.19  Aligned_cols=160  Identities=20%  Similarity=0.276  Sum_probs=119.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+||||||+||||++++++|+++|++|++++|.....            ...+++++.+|++|.. +.+++  .++|+||
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~------------~~~~ve~v~~Dl~d~~-l~~al--~~~D~VI   65 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA------------LDPRVDYVCASLRNPV-LQELA--GEADAVI   65 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc------------ccCCceEEEccCCCHH-HHHHh--cCCCEEE
Confidence            4799999999999999999999999999999753211            0146789999999984 67776  5799999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  230 (296)
                      |+|+....        ...++|+.++.++++++++.+. ++|++||..  |..              ..|.    .+|.+
T Consensus        66 HLAa~~~~--------~~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~~--G~~--------------~~~~----~aE~l  116 (699)
T PRK12320         66 HLAPVDTS--------APGGVGITGLAHVANAAARAGA-RLLFVSQAA--GRP--------------ELYR----QAETL  116 (699)
T ss_pred             EcCccCcc--------chhhHHHHHHHHHHHHHHHcCC-eEEEEECCC--CCC--------------cccc----HHHHH
Confidence            99986321        1225899999999999999886 899999852  211              0122    35555


Q ss_pred             HHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCCcceE
Q 022471          231 ILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKV  290 (296)
Q Consensus       231 ~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  290 (296)
                      +..    .+++++++|++++|||+....           ..++++.++.....++| +++
T Consensus       117 l~~----~~~p~~ILR~~nVYGp~~~~~-----------~~r~I~~~l~~~~~~~p-I~v  160 (699)
T PRK12320        117 VST----GWAPSLVIRIAPPVGRQLDWM-----------VCRTVATLLRSKVSARP-IRV  160 (699)
T ss_pred             HHh----cCCCEEEEeCceecCCCCccc-----------HhHHHHHHHHHHHcCCc-eEE
Confidence            443    568999999999999963211           12678888877778887 444

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.78  E-value=2.2e-18  Score=148.92  Aligned_cols=151  Identities=19%  Similarity=0.087  Sum_probs=116.9

Q ss_pred             HHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc--CCCcEEEEcccccCcCCCCc
Q 022471           86 AALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--NAFDAVMHFAAVAYVGESTL  163 (296)
Q Consensus        86 la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~--~~~D~vi~~Ag~~~~~~~~~  163 (296)
                      ++++|+++|++|++++|+.....              ...++++|++|.+++++++++  +++|+||||||...    ..
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~--------------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~----~~   62 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT--------------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG----TA   62 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh--------------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCC----CC
Confidence            47899999999999998653310              124578999999999999876  57999999999753    23


Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCC----------------CCCCCCCChHHHHHH
Q 022471          164 DPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITE----------------ETPQAPINPYGKAKK  225 (296)
Q Consensus       164 ~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e----------------~~~~~~~~~Y~~sK~  225 (296)
                      ..+..+++|+.++..+++++.+.  ..++||++||.+.|+.....+..+                ..+.++.++|+.||.
T Consensus        63 ~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~  142 (241)
T PRK12428         63 PVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKE  142 (241)
T ss_pred             CHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHH
Confidence            56788999999988888877653  236999999998885332211111                024456789999999


Q ss_pred             HHHHHHHHhh-hc---CCCcEEEEecCeeecCC
Q 022471          226 MAEDIILDFS-KN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       226 ~~e~~~~~~~-~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +.+.+++.++ .+   +|+++++|+||.|.++.
T Consensus       143 a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~  175 (241)
T PRK12428        143 ALILWTMRQAQPWFGARGIRVNCVAPGPVFTPI  175 (241)
T ss_pred             HHHHHHHHHHHHhhhccCeEEEEeecCCccCcc
Confidence            9999999998 54   68999999999999885

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.77  E-value=1.4e-17  Score=179.26  Aligned_cols=175  Identities=17%  Similarity=0.163  Sum_probs=136.5

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCc----------------------------------------
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGN----------------------------------------  107 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~----------------------------------------  107 (296)
                      .++++|||||++|||.+++++|+++ |++|++++|+....                                        
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            3489999999999999999999998 69999999872100                                        


Q ss_pred             ----chhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----CCCcEEEEcccccCcCC----CCcChHHHHHHHHHH
Q 022471          108 ----IGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSN  175 (296)
Q Consensus       108 ----~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~  175 (296)
                          .+..+.++.+...+.++.++.+|++|.+++++++++    +++|+||||||+.....    +.+...+.+++|+.|
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence                011111222222346788999999999999888865    47999999999865432    445566689999999


Q ss_pred             HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc-CCCcEEEEecCeeecCC
Q 022471          176 TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN-SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       176 t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~gi~~~~lrpg~v~Gp~  254 (296)
                      +.++++++.....++||++||.+.+.           .......|+.+|.+.+.+++.++.+ .+++++++.||.+-|+.
T Consensus      2156 ~~~Ll~al~~~~~~~IV~~SSvag~~-----------G~~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtgm 2224 (2582)
T TIGR02813      2156 LLSLLAALNAENIKLLALFSSAAGFY-----------GNTGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGGM 2224 (2582)
T ss_pred             HHHHHHHHHHhCCCeEEEEechhhcC-----------CCCCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCCc
Confidence            99999999887778999999977642           2234678999999999999999887 47999999999987653

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.75  E-value=7.2e-19  Score=138.64  Aligned_cols=167  Identities=22%  Similarity=0.234  Sum_probs=131.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      -+.+||||.+|+|++.++.|+++|+.|+++|-...+..+..+++      +.++.|...|+++.++++.++..     ++
T Consensus        10 lvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel------g~~~vf~padvtsekdv~aala~ak~kfgr   83 (260)
T KOG1199|consen   10 LVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL------GGKVVFTPADVTSEKDVRAALAKAKAKFGR   83 (260)
T ss_pred             eeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh------CCceEEeccccCcHHHHHHHHHHHHhhccc
Confidence            78999999999999999999999999999997655555544443      57899999999999999988765     88


Q ss_pred             CcEEEEcccccCcC----------CCCcChHHHHHHHHHHHHHHHHHHH----Hc----C--CCEEEEEcccccccCCCC
Q 022471          146 FDAVMHFAAVAYVG----------ESTLDPLKYYHNITSNTLVVLESMA----RH----G--VDTLIYSSTCATYGEPEK  205 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~----------~~~~~~~~~~~~n~~~t~~ll~~~~----~~----~--~~riV~~SS~~~~g~~~~  205 (296)
                      +|.++||||+...-          ...++....+++|+.||.++++.-.    ++    +  .+.||++.|.+.|..   
T Consensus        84 ld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdg---  160 (260)
T KOG1199|consen   84 LDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDG---  160 (260)
T ss_pred             eeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecC---
Confidence            99999999974321          1334445567899999988765442    22    1  246889999888843   


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          206 MPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       206 ~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                              ......|++||.+...++.-+++.   .||+++.+.||..-.|-
T Consensus       161 --------q~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpl  204 (260)
T KOG1199|consen  161 --------QTGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPL  204 (260)
T ss_pred             --------ccchhhhhcccCceEeeechhhhhcccCceEEEeecccccCChh
Confidence                    334789999999999988888776   69999999999876664

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.74  E-value=7e-17  Score=133.47  Aligned_cols=167  Identities=17%  Similarity=0.200  Sum_probs=119.8

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      ++|||||+|+||..+++.|+++|. +|++++|+.....+..+.++++...+.++.++.+|++|.+++++++++     ++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            689999999999999999999986 799999874333344445555544467899999999999999999876     47


Q ss_pred             CcEEEEcccccCcCCCC----cChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHH
Q 022471          146 FDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYG  221 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~~~----~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~  221 (296)
                      +|.|||+||........    +.....+..-+.++.++.+++.....+.+|..||.+..-           .....+.|+
T Consensus        82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~-----------G~~gq~~Ya  150 (181)
T PF08659_consen   82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLL-----------GGPGQSAYA  150 (181)
T ss_dssp             EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHT-----------T-TTBHHHH
T ss_pred             cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhc-----------cCcchHhHH
Confidence            99999999986543322    233445667788899999999888889999999976541           223368899


Q ss_pred             HHHHHHHHHHHHhhhcCCCcEEEEecCee
Q 022471          222 KAKKMAEDIILDFSKNSDMAVMILRYFNV  250 (296)
Q Consensus       222 ~sK~~~e~~~~~~~~~~gi~~~~lrpg~v  250 (296)
                      ++-...+.+++.... .|.++.+|..|..
T Consensus       151 aAN~~lda~a~~~~~-~g~~~~sI~wg~W  178 (181)
T PF08659_consen  151 AANAFLDALARQRRS-RGLPAVSINWGAW  178 (181)
T ss_dssp             HHHHHHHHHHHHHHH-TTSEEEEEEE-EB
T ss_pred             HHHHHHHHHHHHHHh-CCCCEEEEEcccc
Confidence            999999999987655 6888888887653

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.74  E-value=5.2e-17  Score=137.82  Aligned_cols=163  Identities=22%  Similarity=0.230  Sum_probs=121.5

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEEEc
Q 022471           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHF  152 (296)
Q Consensus        73 vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi~~  152 (296)
                      |+||||||+||++|+.+|.+.||+|+++.|++.....             +.+.   -+...+.+.+..+ .++|+|||+
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~-------------~~~~---~v~~~~~~~~~~~-~~~DavINL   63 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQ-------------NLHP---NVTLWEGLADALT-LGIDAVINL   63 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhh-------------hcCc---cccccchhhhccc-CCCCEEEEC
Confidence            6899999999999999999999999999997765431             1111   1112233444442 269999999


Q ss_pred             ccccCcC--CCCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 022471          153 AAVAYVG--ESTLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (296)
Q Consensus       153 Ag~~~~~--~~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e  228 (296)
                      ||.....  .+.+.-+...+.-+..|..+.++..+.  .++.+|.-|.++.||......++|+. +.+...-+....+.|
T Consensus        64 AG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~-~~g~~Fla~lc~~WE  142 (297)
T COG1090          64 AGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEES-PPGDDFLAQLCQDWE  142 (297)
T ss_pred             CCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCC-CCCCChHHHHHHHHH
Confidence            9975443  345555667888899999999999854  45677777778889988888899884 444555666777777


Q ss_pred             HHHHHhhhcCCCcEEEEecCeeecCC
Q 022471          229 DIILDFSKNSDMAVMILRYFNVIGSD  254 (296)
Q Consensus       229 ~~~~~~~~~~gi~~~~lrpg~v~Gp~  254 (296)
                      ..+..... .|.+++.+|.|.|.++.
T Consensus       143 ~~a~~a~~-~gtRvvllRtGvVLs~~  167 (297)
T COG1090         143 EEALQAQQ-LGTRVVLLRTGVVLSPD  167 (297)
T ss_pred             HHHhhhhh-cCceEEEEEEEEEecCC
Confidence            77766433 79999999999999976

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.65  E-value=1.4e-15  Score=129.11  Aligned_cols=161  Identities=16%  Similarity=0.181  Sum_probs=128.6

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      ++-++-|.|||||+|+.++.+|++.|-+|++-.|.......-.+...+    -+++.++..|+.|.+++++++  ..-.+
T Consensus        60 sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGd----LGQvl~~~fd~~DedSIr~vv--k~sNV  133 (391)
T KOG2865|consen   60 SGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGD----LGQVLFMKFDLRDEDSIRAVV--KHSNV  133 (391)
T ss_pred             cceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeeccc----ccceeeeccCCCCHHHHHHHH--HhCcE
Confidence            346889999999999999999999999999998765443322222222    368999999999999999999  56799


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e  228 (296)
                      |||+.|--    .+...-...++|+.+.+.++..|++.|+.|+|++|+...             ....-+-|-.||++.|
T Consensus       134 VINLIGrd----~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lga-------------nv~s~Sr~LrsK~~gE  196 (391)
T KOG2865|consen  134 VINLIGRD----YETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGA-------------NVKSPSRMLRSKAAGE  196 (391)
T ss_pred             EEEeeccc----cccCCcccccccchHHHHHHHHHHhhChhheeehhhccc-------------cccChHHHHHhhhhhH
Confidence            99999843    233334567899999999999999999999999999542             1233567899999999


Q ss_pred             HHHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          229 DIILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       229 ~~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                      ..++..    --..+++||..|||..+.
T Consensus       197 ~aVrda----fPeAtIirPa~iyG~eDr  220 (391)
T KOG2865|consen  197 EAVRDA----FPEATIIRPADIYGTEDR  220 (391)
T ss_pred             HHHHhh----CCcceeechhhhcccchh
Confidence            988873    246899999999998753

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.64  E-value=5.1e-16  Score=127.96  Aligned_cols=171  Identities=13%  Similarity=0.095  Sum_probs=119.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      .+.+|+||+|.|||..++..+.+++-+....+++....+  .+.++...  +.......+|+++...+.++.+.     +
T Consensus         6 r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~--gd~~v~~~g~~~e~~~l~al~e~~r~k~g   81 (253)
T KOG1204|consen    6 RKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAY--GDDFVHVVGDITEEQLLGALREAPRKKGG   81 (253)
T ss_pred             ceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEe--cCCcceechHHHHHHHHHHHHhhhhhcCC
Confidence            478999999999999999999888876554443222211  11111111  12334456777776655554432     6


Q ss_pred             CCcEEEEcccccCcC-------CCCcChHHHHHHHHHHHHH----HHHHHHHcC-CCEEEEEcccccccCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVG-------ESTLDPLKYYHNITSNTLV----VLESMARHG-VDTLIYSSTCATYGEPEKMPITEET  212 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~-------~~~~~~~~~~~~n~~~t~~----ll~~~~~~~-~~riV~~SS~~~~g~~~~~~~~e~~  212 (296)
                      +.|+||||||...+-       ...+.+..+|+.|+.+...    +++.+++.. .+.+|++||.+..           .
T Consensus        82 kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav-----------~  150 (253)
T KOG1204|consen   82 KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAV-----------R  150 (253)
T ss_pred             ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhh-----------c
Confidence            799999999975432       1334556789999998554    445555553 3689999997654           5


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc-C-CCcEEEEecCeeecCCC
Q 022471          213 PQAPINPYGKAKKMAEDIILDFSKN-S-DMAVMILRYFNVIGSDP  255 (296)
Q Consensus       213 ~~~~~~~Y~~sK~~~e~~~~~~~~~-~-gi~~~~lrpg~v~Gp~~  255 (296)
                      |...+..|+.+|+|-+++.+.++.| + ++++..++||.|-.+..
T Consensus       151 p~~~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq  195 (253)
T KOG1204|consen  151 PFSSWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQ  195 (253)
T ss_pred             cccHHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhH
Confidence            6777899999999999999999977 3 89999999999987753

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.64  E-value=2.3e-15  Score=125.38  Aligned_cols=174  Identities=24%  Similarity=0.242  Sum_probs=142.2

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcc-hhhhhhhhh--CCCCCceEEEEccCCCHHHHHHHhhcCC
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNI-GAVKVLQEL--FPEPGRLQFIYADLGDAKAVNKFFSENA  145 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~-~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~v~~~~~~~~  145 (296)
                      ..|.+||||-||.=|++|++.|+.+|++|..+-|++.+-. .-.+.+-.-  ..++.......+|++|...+.+++..-+
T Consensus        27 ~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ik  106 (376)
T KOG1372|consen   27 PRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIK  106 (376)
T ss_pred             cceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccC
Confidence            3378999999999999999999999999998877554432 222222111  1123567778899999999999998888


Q ss_pred             CcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCC---CEEEEEcccccccCCCCCCCCCCCCCCCCChHHH
Q 022471          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV---DTLIYSSTCATYGEPEKMPITEETPQAPINPYGK  222 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~---~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~  222 (296)
                      ++-|+|+|+.++...+.+-++.+-++...||++++++.+..+.   -|+-..||+..||.....|-.|..|..|.++|++
T Consensus       107 PtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa~  186 (376)
T KOG1372|consen  107 PTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPRSPYAA  186 (376)
T ss_pred             chhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCCChhHH
Confidence            9999999999998888888998999999999999999998763   2677789999999998889999999999999999


Q ss_pred             HHHHHHHHHHHhhhcCCCcE
Q 022471          223 AKKMAEDIILDFSKNSDMAV  242 (296)
Q Consensus       223 sK~~~e~~~~~~~~~~gi~~  242 (296)
                      +|..+-..+-.+.+.+++-.
T Consensus       187 aKmy~~WivvNyREAYnmfA  206 (376)
T KOG1372|consen  187 AKMYGYWIVVNYREAYNMFA  206 (376)
T ss_pred             hhhhheEEEEEhHHhhccee
Confidence            99998777666665565443

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.63  E-value=4.5e-15  Score=131.24  Aligned_cols=136  Identities=18%  Similarity=0.169  Sum_probs=100.2

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----CC-C
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NA-F  146 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~-~  146 (296)
                      +|+||||||+||++++++|+++|++|+++.|++.+..            ..+++.+.+|+.|.+++.++++.    .+ +
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~------------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~   68 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA------------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEI   68 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc------------CCCCccccccCCCHHHHHHHHhcccCcCCce
Confidence            4899999999999999999999999999998765321            13456678999999999998842    35 9


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHH
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKM  226 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~  226 (296)
                      |.|+|+++...      ..       .....++++++++.|++|||++||...+..                  +..+..
T Consensus        69 d~v~~~~~~~~------~~-------~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~------------------~~~~~~  117 (285)
T TIGR03649        69 SAVYLVAPPIP------DL-------APPMIKFIDFARSKGVRRFVLLSASIIEKG------------------GPAMGQ  117 (285)
T ss_pred             eEEEEeCCCCC------Ch-------hHHHHHHHHHHHHcCCCEEEEeeccccCCC------------------CchHHH
Confidence            99999986321      10       124467899999999999999999654310                  002223


Q ss_pred             HHHHHHHhhhcCCCcEEEEecCeeecC
Q 022471          227 AEDIILDFSKNSDMAVMILRYFNVIGS  253 (296)
Q Consensus       227 ~e~~~~~~~~~~gi~~~~lrpg~v~Gp  253 (296)
                      .+.++++.   .|++++++||+++|+.
T Consensus       118 ~~~~l~~~---~gi~~tilRp~~f~~~  141 (285)
T TIGR03649       118 VHAHLDSL---GGVEYTVLRPTWFMEN  141 (285)
T ss_pred             HHHHHHhc---cCCCEEEEeccHHhhh
Confidence            34444331   4899999999988864

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK06720 hypothetical protein; Provisional

Probab=99.60  E-value=2.5e-14  Score=116.65  Aligned_cols=127  Identities=17%  Similarity=0.137  Sum_probs=88.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+++||||++|||.++++.|+++|++|++++|+....++..+.+..   .+....++.+|+++.+++++++++     +
T Consensus        16 gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G   92 (169)
T PRK06720         16 GKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITN---LGGEALFVSYDMEKQGDWQRVISITLNAFS   92 (169)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999999765433333333322   234567889999999998887653     6


Q ss_pred             CCcEEEEcccccCcCC-CCcChHHHH-HHHHH----HHHHHHHHHHHcC-------CCEEEEEccccc
Q 022471          145 AFDAVMHFAAVAYVGE-STLDPLKYY-HNITS----NTLVVLESMARHG-------VDTLIYSSTCAT  199 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~-~~~~~~~~~-~~n~~----~t~~ll~~~~~~~-------~~riV~~SS~~~  199 (296)
                      ++|++|||||...... .++..++.+ ..|+.    -++.+.+.+++++       .+|+..+||.+.
T Consensus        93 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (169)
T PRK06720         93 RIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQ  160 (169)
T ss_pred             CCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccc
Confidence            8999999999865332 222122221 22333    3666666666553       468888888543

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.57  E-value=2.5e-14  Score=119.66  Aligned_cols=183  Identities=11%  Similarity=0.160  Sum_probs=131.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-----eEEEEecCCCCcchhhhhhhhhCCC-CCceEEEEccCCCHHHHHHHhhc-
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-----RVTIVDNLSRGNIGAVKVLQELFPE-PGRLQFIYADLGDAKAVNKFFSE-  143 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-----~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~-  143 (296)
                      |.+||||+++|||.+||.+|++...     ++++.+|+-.+.++....+++..+. ..+++++..|+++..++.++..+ 
T Consensus         4 KvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di   83 (341)
T KOG1478|consen    4 KVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDI   83 (341)
T ss_pred             eEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHH
Confidence            7899999999999999999998754     4667788777777777777766553 25788999999999988877655 


Q ss_pred             ----CCCcEEEEcccccCcCC-------------------------------CCcChHHHHHHHHHHHHH----HHHHHH
Q 022471          144 ----NAFDAVMHFAAVAYVGE-------------------------------STLDPLKYYHNITSNTLV----VLESMA  184 (296)
Q Consensus       144 ----~~~D~vi~~Ag~~~~~~-------------------------------~~~~~~~~~~~n~~~t~~----ll~~~~  184 (296)
                          .++|.|+-|||++..+.                               +.+...+.++.|+.|...    +.+.+.
T Consensus        84 ~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll~  163 (341)
T KOG1478|consen   84 KQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLLC  163 (341)
T ss_pred             HHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHhh
Confidence                68999999999754321                               233444578899999544    444444


Q ss_pred             HcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          185 RHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       185 ~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      .+....+|.+||...-  +....+.+-.......+|..||.+.+.+.-++-+.   .|+.-.++.||..-....
T Consensus       164 ~~~~~~lvwtSS~~a~--kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~  235 (341)
T KOG1478|consen  164 HSDNPQLVWTSSRMAR--KKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSF  235 (341)
T ss_pred             cCCCCeEEEEeecccc--cccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchh
Confidence            4444599999996542  11111111123345678999999999988777665   578889999998665543

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.53  E-value=3.1e-13  Score=124.23  Aligned_cols=187  Identities=21%  Similarity=0.227  Sum_probs=132.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCC---CeEEEEecCCCCcchhhhhhhhh------------CC-CCCceEEEEccCCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDS---YRVTIVDNLSRGNIGAVKVLQEL------------FP-EPGRLQFIYADLGD  133 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~~------------~~-~~~~~~~~~~Dl~d  133 (296)
                      +|+|+|||||||+|+-+++.|++.-   -+++++-|.... .+..+.++..            .+ .-.++..+.+|+++
T Consensus        12 ~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g-~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~   90 (467)
T KOG1221|consen   12 NKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKG-KAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISE   90 (467)
T ss_pred             CCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCC-CCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccC
Confidence            4999999999999999999999864   267777775433 2222222221            11 12467788999986


Q ss_pred             H------HHHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcccccccCC---
Q 022471          134 A------KAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEP---  203 (296)
Q Consensus       134 ~------~~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~~riV~~SS~~~~g~~---  203 (296)
                      +      .+++.+.  ..+|+|||+|+....   .+.......+|..||+++++.+++.. .+-+|++|++.+.-..   
T Consensus        91 ~~LGis~~D~~~l~--~eV~ivih~AAtvrF---de~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i  165 (467)
T KOG1221|consen   91 PDLGISESDLRTLA--DEVNIVIHSAATVRF---DEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHI  165 (467)
T ss_pred             cccCCChHHHHHHH--hcCCEEEEeeeeecc---chhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccc
Confidence            4      4555444  579999999997544   23444567899999999999998874 5789999998765221   


Q ss_pred             CCC--CCCC------------CC---------C---CCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCC
Q 022471          204 EKM--PITE------------ET---------P---QAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEG  257 (296)
Q Consensus       204 ~~~--~~~e------------~~---------~---~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~  257 (296)
                      ...  +..+            ..         +   ...-+.|.-+|+.+|+++...+  .+++++++||+.|......+
T Consensus       166 ~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~--~~lPivIiRPsiI~st~~EP  243 (467)
T KOG1221|consen  166 EEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA--ENLPLVIIRPSIITSTYKEP  243 (467)
T ss_pred             cccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc--cCCCeEEEcCCceeccccCC
Confidence            110  1111            00         0   1124679999999999998865  57999999999999998887


Q ss_pred             CCCCCCC
Q 022471          258 RLGEAPR  264 (296)
Q Consensus       258 ~~~~~~~  264 (296)
                      ..||.+.
T Consensus       244 ~pGWidn  250 (467)
T KOG1221|consen  244 FPGWIDN  250 (467)
T ss_pred             CCCcccc
Confidence            7777655

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.53  E-value=3.9e-13  Score=115.43  Aligned_cols=148  Identities=21%  Similarity=0.239  Sum_probs=106.1

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEEEc
Q 022471           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHF  152 (296)
Q Consensus        73 vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi~~  152 (296)
                      |+||||||.+|+.+++.|++.+++|.++.|+..  ....+.++.     ..++.+.+|+.|.+++.+++  .++|+||.+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~--~~~~~~l~~-----~g~~vv~~d~~~~~~l~~al--~g~d~v~~~   71 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPS--SDRAQQLQA-----LGAEVVEADYDDPESLVAAL--KGVDAVFSV   71 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSH--HHHHHHHHH-----TTTEEEES-TT-HHHHHHHH--TTCSEEEEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccc--hhhhhhhhc-----ccceEeecccCCHHHHHHHH--cCCceEEee
Confidence            799999999999999999999999999998662  222222332     35678899999999999999  689999988


Q ss_pred             ccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 022471          153 AAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIIL  232 (296)
Q Consensus       153 Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~  232 (296)
                      -+....            .-.....++++++++.++++||+.|....+.        +.....|..+.-..|...|.+++
T Consensus        72 ~~~~~~------------~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~--------~~~~~~p~~~~~~~k~~ie~~l~  131 (233)
T PF05368_consen   72 TPPSHP------------SELEQQKNLIDAAKAAGVKHFVPSSFGADYD--------ESSGSEPEIPHFDQKAEIEEYLR  131 (233)
T ss_dssp             SSCSCC------------CHHHHHHHHHHHHHHHT-SEEEESEESSGTT--------TTTTSTTHHHHHHHHHHHHHHHH
T ss_pred             cCcchh------------hhhhhhhhHHHhhhccccceEEEEEeccccc--------ccccccccchhhhhhhhhhhhhh
Confidence            774431            1134457799999999999999755544431        11112233455678888888887


Q ss_pred             HhhhcCCCcEEEEecCeeecC
Q 022471          233 DFSKNSDMAVMILRYFNVIGS  253 (296)
Q Consensus       233 ~~~~~~gi~~~~lrpg~v~Gp  253 (296)
                      +    .+++++++|||+.+..
T Consensus       132 ~----~~i~~t~i~~g~f~e~  148 (233)
T PF05368_consen  132 E----SGIPYTIIRPGFFMEN  148 (233)
T ss_dssp             H----CTSEBEEEEE-EEHHH
T ss_pred             h----ccccceeccccchhhh
Confidence            6    5999999999986553

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.50  E-value=1.1e-13  Score=114.66  Aligned_cols=194  Identities=21%  Similarity=0.242  Sum_probs=142.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhC-CCe-EEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKD-SYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~-G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      .+||||||-|.+|..+|..|..+ |.+ |++-+.......        ..   ..=-++..|+.|...+++++-..++|.
T Consensus        45 PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~--------V~---~~GPyIy~DILD~K~L~eIVVn~RIdW  113 (366)
T KOG2774|consen   45 PRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPAN--------VT---DVGPYIYLDILDQKSLEEIVVNKRIDW  113 (366)
T ss_pred             CeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchh--------hc---ccCCchhhhhhccccHHHhhcccccce
Confidence            68999999999999999998876 654 554442221110        01   112367799999999999998889999


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCC-CCCCCCCCCCCCCChHHHHHHHH
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPE-KMPITEETPQAPINPYGKAKKMA  227 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~-~~~~~e~~~~~~~~~Y~~sK~~~  227 (296)
                      +||..+.... .-+.+..-..++|+.|..++++.+++.+. ++..-|+.+.||... ..|..+..-..|.+.||.||..+
T Consensus       114 L~HfSALLSA-vGE~NVpLA~~VNI~GvHNil~vAa~~kL-~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHA  191 (366)
T KOG2774|consen  114 LVHFSALLSA-VGETNVPLALQVNIRGVHNILQVAAKHKL-KVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHA  191 (366)
T ss_pred             eeeHHHHHHH-hcccCCceeeeecchhhhHHHHHHHHcCe-eEeecccccccCCCCCCCCCCCeeeecCceeechhHHHH
Confidence            9998875321 11233344567999999999999999886 566678889998654 33444445567899999999999


Q ss_pred             HHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          228 EDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       228 e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      |.+-+.+...+|+++-++|.+.++...+.+-  ...       ..-+..+.+++.+|+-
T Consensus       192 EL~GEy~~hrFg~dfr~~rfPg~is~~~pgg--gtt-------dya~A~f~~Al~~gk~  241 (366)
T KOG2774|consen  192 ELLGEYFNHRFGVDFRSMRFPGIISATKPGG--GTT-------DYAIAIFYDALQKGKH  241 (366)
T ss_pred             HHHHHHHHhhcCccceecccCcccccCCCCC--Ccc-------hhHHHHHHHHHHcCCc
Confidence            9999999988999999999998887643221  111       1456667777777654

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.49  E-value=1.9e-12  Score=116.74  Aligned_cols=176  Identities=14%  Similarity=-0.009  Sum_probs=111.5

Q ss_pred             CCccEEEEEcCCChhhHH--HHHHHHhCCCeEEEEecCCCCcc------------hhhhhhhhhCCCCCceEEEEccCCC
Q 022471           68 EGVTHVLVTGGAGYIGSH--AALRLLKDSYRVTIVDNLSRGNI------------GAVKVLQELFPEPGRLQFIYADLGD  133 (296)
Q Consensus        68 ~~~k~vlVTGasG~IG~~--la~~L~~~G~~V~~~~r~~~~~~------------~~~~~~~~~~~~~~~~~~~~~Dl~d  133 (296)
                      .++|++|||||++|||.+  ++++| +.|++|+++++......            ...+.+++   .+..+..+.||+++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~---~G~~a~~i~~DVss  114 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKA---AGLYAKSINGDAFS  114 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHh---cCCceEEEEcCCCC
Confidence            355999999999999999  89999 99999988875321111            12222222   13456788999999


Q ss_pred             HHHHHHHhhc-----CCCcEEEEcccccCcCC-----------------C----Cc-------------ChHHHH--HHH
Q 022471          134 AKAVNKFFSE-----NAFDAVMHFAAVAYVGE-----------------S----TL-------------DPLKYY--HNI  172 (296)
Q Consensus       134 ~~~v~~~~~~-----~~~D~vi~~Ag~~~~~~-----------------~----~~-------------~~~~~~--~~n  172 (296)
                      .++++++++.     +++|+||||+|......                 .    .+             -.++.+  -+.
T Consensus       115 ~E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~  194 (398)
T PRK13656        115 DEIKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVK  194 (398)
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHH
Confidence            9999888765     78999999999752211                 0    00             000111  123


Q ss_pred             HHHHHHH---HHHHHHc----CCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcE
Q 022471          173 TSNTLVV---LESMARH----GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAV  242 (296)
Q Consensus       173 ~~~t~~l---l~~~~~~----~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~  242 (296)
                      ++|....   ++++...    ...++|-.|..+.   ...      .|......-|.+|.+.|.-++.++.+   .|+++
T Consensus       195 vMggedw~~Wi~al~~a~lla~g~~~va~TY~G~---~~t------~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~gira  265 (398)
T PRK13656        195 VMGGEDWELWIDALDEAGVLAEGAKTVAYSYIGP---ELT------HPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDA  265 (398)
T ss_pred             hhccchHHHHHHHHHhcccccCCcEEEEEecCCc---cee------ecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEE
Confidence            3443111   1111111    1246666665321   000      11111247799999999999999887   68999


Q ss_pred             EEEecCeeecCCCC
Q 022471          243 MILRYFNVIGSDPE  256 (296)
Q Consensus       243 ~~lrpg~v~Gp~~~  256 (296)
                      +++..+.+......
T Consensus       266 n~i~~g~~~T~Ass  279 (398)
T PRK13656        266 YVSVLKAVVTQASS  279 (398)
T ss_pred             EEEecCcccchhhh
Confidence            99999998887644

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.45  E-value=7e-12  Score=100.38  Aligned_cols=163  Identities=15%  Similarity=0.142  Sum_probs=118.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |||.|.||||-+|++|+++..++||+|+++.|++.+...           -..+...+.|+.|++++.+.+  .+.|+||
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~-----------~~~~~i~q~Difd~~~~a~~l--~g~DaVI   67 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAA-----------RQGVTILQKDIFDLTSLASDL--AGHDAVI   67 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccc-----------cccceeecccccChhhhHhhh--cCCceEE
Confidence            689999999999999999999999999999987754321           135678899999999998888  6899999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  230 (296)
                      ..-+.....     ....   .......+++.++..+..|++.++.++..--.++ ..-.+.|..|..-|..++..+| +
T Consensus        68 sA~~~~~~~-----~~~~---~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g-~rLvD~p~fP~ey~~~A~~~ae-~  137 (211)
T COG2910          68 SAFGAGASD-----NDEL---HSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEG-TRLVDTPDFPAEYKPEALAQAE-F  137 (211)
T ss_pred             EeccCCCCC-----hhHH---HHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCC-ceeecCCCCchhHHHHHHHHHH-H
Confidence            877643221     1111   1223667888888889999999988665422111 1112344555555666666665 4


Q ss_pred             HHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          231 ILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       231 ~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                      ++.+..+.+++|+-+.|...|-|++.
T Consensus       138 L~~Lr~~~~l~WTfvSPaa~f~PGer  163 (211)
T COG2910         138 LDSLRAEKSLDWTFVSPAAFFEPGER  163 (211)
T ss_pred             HHHHhhccCcceEEeCcHHhcCCccc
Confidence            56777777799999999999999863

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.37  E-value=2.6e-11  Score=106.17  Aligned_cols=148  Identities=19%  Similarity=0.233  Sum_probs=109.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      ++|+||||||++|++++++|+++|++|+++.|++.......          ..+.+...|+.+.+.+...+  .+.|.++
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~----------~~v~~~~~d~~~~~~l~~a~--~G~~~~~   68 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA----------GGVEVVLGDLRDPKSLVAGA--KGVDGVL   68 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc----------CCcEEEEeccCCHhHHHHHh--ccccEEE
Confidence            57999999999999999999999999999998765433211          46888999999999999999  7899999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  230 (296)
                      ++.+... +..     ...........+..+.+. .+.++++++|+....             ......|..+|..+|..
T Consensus        69 ~i~~~~~-~~~-----~~~~~~~~~~~~~a~~a~-~~~~~~~~~s~~~~~-------------~~~~~~~~~~~~~~e~~  128 (275)
T COG0702          69 LISGLLD-GSD-----AFRAVQVTAVVRAAEAAG-AGVKHGVSLSVLGAD-------------AASPSALARAKAAVEAA  128 (275)
T ss_pred             EEecccc-ccc-----chhHHHHHHHHHHHHHhc-CCceEEEEeccCCCC-------------CCCccHHHHHHHHHHHH
Confidence            9988654 221     122223333344444443 346688888885532             12357899999999999


Q ss_pred             HHHhhhcCCCcEEEEecCeeecCC
Q 022471          231 ILDFSKNSDMAVMILRYFNVIGSD  254 (296)
Q Consensus       231 ~~~~~~~~gi~~~~lrpg~v~Gp~  254 (296)
                      +.+    .|+..+++|+..+|...
T Consensus       129 l~~----sg~~~t~lr~~~~~~~~  148 (275)
T COG0702         129 LRS----SGIPYTTLRRAAFYLGA  148 (275)
T ss_pred             HHh----cCCCeEEEecCeeeecc
Confidence            988    89999999976666543

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.34  E-value=1.4e-11  Score=97.94  Aligned_cols=163  Identities=15%  Similarity=0.128  Sum_probs=123.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      ||.++|.||||-.|+.+++++++.+-  +|+++.|+.....+.          ...+.....|....++....+  .++|
T Consensus        18 ~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at----------~k~v~q~~vDf~Kl~~~a~~~--qg~d   85 (238)
T KOG4039|consen   18 NMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT----------DKVVAQVEVDFSKLSQLATNE--QGPD   85 (238)
T ss_pred             ccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc----------cceeeeEEechHHHHHHHhhh--cCCc
Confidence            48899999999999999999999984  899998864332211          245666677877776666655  7899


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHH
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~  227 (296)
                      +.+.+-|......   ..+..+.+..+-...+++++++.|+++|+.+||.+.-             +...-.|-..|-..
T Consensus        86 V~FcaLgTTRgka---GadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd-------------~sSrFlY~k~KGEv  149 (238)
T KOG4039|consen   86 VLFCALGTTRGKA---GADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGAD-------------PSSRFLYMKMKGEV  149 (238)
T ss_pred             eEEEeeccccccc---ccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCC-------------cccceeeeeccchh
Confidence            9999988654332   2344566666677789999999999999999997642             22345699999999


Q ss_pred             HHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCC
Q 022471          228 EDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAP  263 (296)
Q Consensus       228 e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~  263 (296)
                      |.-+.++--   -+++++|||.+.|..+..+.|.+.
T Consensus       150 E~~v~eL~F---~~~~i~RPG~ll~~R~esr~gefl  182 (238)
T KOG4039|consen  150 ERDVIELDF---KHIIILRPGPLLGERTESRQGEFL  182 (238)
T ss_pred             hhhhhhccc---cEEEEecCcceecccccccccchh
Confidence            988877633   368999999999998777655443

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.34  E-value=5.7e-11  Score=98.46  Aligned_cols=168  Identities=14%  Similarity=0.110  Sum_probs=114.1

Q ss_pred             ccEEEEEcC--CChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----
Q 022471           70 VTHVLVTGG--AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (296)
Q Consensus        70 ~k~vlVTGa--sG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (296)
                      +|++||+|-  ...|+..||++|.++|+++......+    ++.+.++++...-+....++||+++.+++++++++    
T Consensus         6 GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e----~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~   81 (259)
T COG0623           6 GKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE----RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKK   81 (259)
T ss_pred             CceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH----HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHh
Confidence            499999996  46899999999999999999887544    33344444433223456789999999999999876    


Q ss_pred             -CCCcEEEEcccccCc----CCCCcChHHHHHHHHHH-H---HHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCC
Q 022471          144 -NAFDAVMHFAAVAYV----GESTLDPLKYYHNITSN-T---LVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEET  212 (296)
Q Consensus       144 -~~~D~vi~~Ag~~~~----~~~~~~~~~~~~~n~~~-t---~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~  212 (296)
                       +++|.|||+-|....    +...+.+.+-|..-... +   ..+++++++-  +.+.+|-++=.+.           +.
T Consensus        82 ~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs-----------~r  150 (259)
T COG0623          82 WGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGS-----------ER  150 (259)
T ss_pred             hCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccc-----------ee
Confidence             889999999987542    22223333333322221 2   2222222211  2345665543211           23


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeec
Q 022471          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIG  252 (296)
Q Consensus       213 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~G  252 (296)
                      ..+.++..+..|++.|.-++.++.+   .||||+.|.-|.|-.
T Consensus       151 ~vPnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrT  193 (259)
T COG0623         151 VVPNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRT  193 (259)
T ss_pred             ecCCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHH
Confidence            4556889999999999999999987   689999999988744

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.32  E-value=2.4e-11  Score=108.54  Aligned_cols=178  Identities=13%  Similarity=0.090  Sum_probs=125.1

Q ss_pred             CCCccEEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcC
Q 022471           67 EEGVTHVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSEN  144 (296)
Q Consensus        67 ~~~~k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~  144 (296)
                      ...|++|.|||++|.||+.++..|+.++  .+++++|+.. ...+.. .+...   ..  .....+.+|+.++.+.+  .
T Consensus         5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~-~~g~a~-Dl~~~---~~--~~~v~~~td~~~~~~~l--~   75 (321)
T PTZ00325          5 ALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG-APGVAA-DLSHI---DT--PAKVTGYADGELWEKAL--R   75 (321)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC-Cccccc-chhhc---Cc--CceEEEecCCCchHHHh--C
Confidence            3456899999999999999999999655  5899999721 111111 11111   11  22345666655545555  5


Q ss_pred             CCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCC--CCCCCCCCCCCCChHHH
Q 022471          145 AFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEK--MPITEETPQAPINPYGK  222 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~--~~~~e~~~~~~~~~Y~~  222 (296)
                      +.|+||++||....+  ..+..+.+..|+..++.+++++++.+.+++|+++|..+-.-..-  ..+.+....++...||.
T Consensus        76 gaDvVVitaG~~~~~--~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~  153 (321)
T PTZ00325         76 GADLVLICAGVPRKP--GMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGV  153 (321)
T ss_pred             CCCEEEECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeec
Confidence            799999999975432  23567789999999999999999999999999999554221100  01123455667778888


Q ss_pred             HHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          223 AKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       223 sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                      +-+-.-++-..+++..++....++ +.|+|.+.+
T Consensus       154 g~LDs~R~r~~la~~l~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        154 TTLDVVRARKFVAEALGMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             hhHHHHHHHHHHHHHhCcChhheE-EEEEeecCC
Confidence            756666778888888999999988 999998754

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.24  E-value=1.6e-10  Score=104.86  Aligned_cols=166  Identities=20%  Similarity=0.138  Sum_probs=107.5

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHH-HHHHHhhc--CC
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK-AVNKFFSE--NA  145 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-~v~~~~~~--~~  145 (296)
                      .+++|+|+||||.+|+-+++.|+++|+.|.++.|+.....+...    .........-+..|..... ....+.+.  ..
T Consensus        78 ~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~----~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~  153 (411)
T KOG1203|consen   78 KPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG----VFFVDLGLQNVEADVVTAIDILKKLVEAVPKG  153 (411)
T ss_pred             CCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc----ccccccccceeeeccccccchhhhhhhhcccc
Confidence            34799999999999999999999999999999876554443322    1111123333444444433 33333332  13


Q ss_pred             CcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC---CChHHH
Q 022471          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP---INPYGK  222 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~---~~~Y~~  222 (296)
                      ..+++-++|-....  + +...-+.+...|+++++++|+..|++|+|++||+..-...        .++..   ...+-.
T Consensus       154 ~~~v~~~~ggrp~~--e-d~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~--------~~~~~~~~~~~~~~  222 (411)
T KOG1203|consen  154 VVIVIKGAGGRPEE--E-DIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFN--------QPPNILLLNGLVLK  222 (411)
T ss_pred             ceeEEecccCCCCc--c-cCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccC--------CCchhhhhhhhhhH
Confidence            45666666532221  1 2223456778899999999999999999999986542110        11111   223447


Q ss_pred             HHHHHHHHHHHhhhcCCCcEEEEecCeeecC
Q 022471          223 AKKMAEDIILDFSKNSDMAVMILRYFNVIGS  253 (296)
Q Consensus       223 sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp  253 (296)
                      +|..+|.+.+.    .|++.++|||+...-.
T Consensus       223 ~k~~~e~~~~~----Sgl~ytiIR~g~~~~~  249 (411)
T KOG1203|consen  223 AKLKAEKFLQD----SGLPYTIIRPGGLEQD  249 (411)
T ss_pred             HHHhHHHHHHh----cCCCcEEEeccccccC
Confidence            78888877764    8999999999986553

>PLN00106 malate dehydrogenase

Probab=99.20  E-value=2.5e-10  Score=102.13  Aligned_cols=172  Identities=13%  Similarity=0.087  Sum_probs=121.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +||.|||++|.||+.++..|+.++.  +++++|+++... ... .+...   ....  ...|+++.+++.+.+  .+.|+
T Consensus        19 ~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g-~a~-Dl~~~---~~~~--~i~~~~~~~d~~~~l--~~aDi   89 (323)
T PLN00106         19 FKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPG-VAA-DVSHI---NTPA--QVRGFLGDDQLGDAL--KGADL   89 (323)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCe-eEc-hhhhC---CcCc--eEEEEeCCCCHHHHc--CCCCE
Confidence            6899999999999999999997664  899999765111 111 11111   1111  233544444566666  67999


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccC--CCCCCCCCCCCCCCCChHHHHHHH
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGE--PEKMPITEETPQAPINPYGKAKKM  226 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~--~~~~~~~e~~~~~~~~~Y~~sK~~  226 (296)
                      |||+||....+  .....+.+..|+..++.+.+.+++.+...+|+++|--+=+.  .-...+......++...||.+++-
T Consensus        90 VVitAG~~~~~--g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~LD  167 (323)
T PLN00106         90 VIIPAGVPRKP--GMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLD  167 (323)
T ss_pred             EEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEecch
Confidence            99999986442  24567789999999999999999999989999888432100  000011233456678889999999


Q ss_pred             HHHHHHHhhhcCCCcEEEEecCeeecCC
Q 022471          227 AEDIILDFSKNSDMAVMILRYFNVIGSD  254 (296)
Q Consensus       227 ~e~~~~~~~~~~gi~~~~lrpg~v~Gp~  254 (296)
                      .+.+-..++++.|+....| -+.|+|.+
T Consensus       168 s~Rl~~~lA~~lgv~~~~V-~~~ViGeH  194 (323)
T PLN00106        168 VVRANTFVAEKKGLDPADV-DVPVVGGH  194 (323)
T ss_pred             HHHHHHHHHHHhCCChhhe-EEEEEEeC
Confidence            9999999999999988887 56777776

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.18  E-value=1.5e-10  Score=95.05  Aligned_cols=157  Identities=18%  Similarity=0.206  Sum_probs=102.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+++||||||++| ++++.|+++|++|++++|++....   +....+ +...++.++.+|++|.+++.++++.     ++
T Consensus         1 m~vlVtGGtG~gg-~la~~L~~~G~~V~v~~R~~~~~~---~l~~~l-~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~   75 (177)
T PRK08309          1 MHALVIGGTGMLK-RVSLWLCEKGFHVSVIARREVKLE---NVKRES-TTPESITPLPLDYHDDDALKLAIKSTIEKNGP   75 (177)
T ss_pred             CEEEEECcCHHHH-HHHHHHHHCcCEEEEEECCHHHHH---HHHHHh-hcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5799999996555 599999999999999987543222   222212 1235788899999999999888865     67


Q ss_pred             CcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC----EEEEE-cccccccCCCCCCCCCCCCCCCCChH
Q 022471          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD----TLIYS-STCATYGEPEKMPITEETPQAPINPY  220 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~----riV~~-SS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (296)
                      +|++|+.+-                  +.++.++..++++.+++    +++++ +|.+.            ++       
T Consensus        76 id~lv~~vh------------------~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~~~------------~~-------  118 (177)
T PRK08309         76 FDLAVAWIH------------------SSAKDALSVVCRELDGSSETYRLFHVLGSAAS------------DP-------  118 (177)
T ss_pred             CeEEEEecc------------------ccchhhHHHHHHHHccCCCCceEEEEeCCcCC------------ch-------
Confidence            899997764                  33567899999999988    88886 44221            00       


Q ss_pred             HHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          221 GKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       221 ~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                         +...+    .+.. ....+.-|..|++.-... .+|        -.|.-+..-+++++..+.+
T Consensus       119 ---~~~~~----~~~~-~~~~~~~i~lgf~~~~~~-~rw--------lt~~ei~~gv~~~~~~~~~  167 (177)
T PRK08309        119 ---RIPSE----KIGP-ARCSYRRVILGFVLEDTY-SRW--------LTHEEISDGVIKAIESDAD  167 (177)
T ss_pred             ---hhhhh----hhhh-cCCceEEEEEeEEEeCCc-ccc--------CchHHHHHHHHHHHhcCCC
Confidence               01111    1111 234566677888776442 221        1122566668888877666

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=98.97  E-value=2.4e-09  Score=88.82  Aligned_cols=155  Identities=17%  Similarity=0.126  Sum_probs=113.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      ...++.|+.++.|+++++...+.|+.|.++.|+..+.. ..       .....+.+..+|....+-.+...  .++..++
T Consensus        53 e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~-l~-------sw~~~vswh~gnsfssn~~k~~l--~g~t~v~  122 (283)
T KOG4288|consen   53 EWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQT-LS-------SWPTYVSWHRGNSFSSNPNKLKL--SGPTFVY  122 (283)
T ss_pred             HHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcch-hh-------CCCcccchhhccccccCcchhhh--cCCcccH
Confidence            46899999999999999999999999999988755321 11       12356777788876655444444  4677777


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  230 (296)
                      -++|...      +...+..+|-....+...++.+.++++++|+|.... |          .+..-...|-.+|.++|.-
T Consensus       123 e~~ggfg------n~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d~-~----------~~~~i~rGY~~gKR~AE~E  185 (283)
T KOG4288|consen  123 EMMGGFG------NIILMDRINGTANINAVKAAAKAGVPRFVYISAHDF-G----------LPPLIPRGYIEGKREAEAE  185 (283)
T ss_pred             HHhcCcc------chHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhhc-C----------CCCccchhhhccchHHHHH
Confidence            7776432      334455677777888899999999999999998432 1          1111124799999999986


Q ss_pred             HHHhhhcCCCcEEEEecCeeecCCC
Q 022471          231 ILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       231 ~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                      +...   ++.+-+++|||++||...
T Consensus       186 ll~~---~~~rgiilRPGFiyg~R~  207 (283)
T KOG4288|consen  186 LLKK---FRFRGIILRPGFIYGTRN  207 (283)
T ss_pred             HHHh---cCCCceeeccceeecccc
Confidence            6553   678899999999999853

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.94  E-value=1.7e-08  Score=90.79  Aligned_cols=172  Identities=13%  Similarity=0.056  Sum_probs=102.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCC-------CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDS-------YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE  143 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~  143 (296)
                      .+|+||||+|+||++++..|+..+       .+|+++|++... ..+.....++..   -......|+....++.+.+  
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~-~~~~g~~~Dl~d---~~~~~~~~~~~~~~~~~~l--   76 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPAL-KALEGVVMELQD---CAFPLLKSVVATTDPEEAF--   76 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCcc-ccccceeeehhh---ccccccCCceecCCHHHHh--
Confidence            479999999999999999999854       589999985431 111110001100   0001123544445555666  


Q ss_pred             CCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcC-CC-EEEEEcccc---cccCCCCCCCCCCCC-CCCC
Q 022471          144 NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VD-TLIYSSTCA---TYGEPEKMPITEETP-QAPI  217 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~~-riV~~SS~~---~~g~~~~~~~~e~~~-~~~~  217 (296)
                      .++|+|||+||.....  ..+..+.++.|+...+.+.+.+.+.. .+ .+|.+|.-.   .|-      ..+..+ .++.
T Consensus        77 ~~aDiVI~tAG~~~~~--~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~------~~k~~~~~~~~  148 (325)
T cd01336          77 KDVDVAILVGAMPRKE--GMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNALI------LLKYAPSIPKE  148 (325)
T ss_pred             CCCCEEEEeCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHHHH------HHHHcCCCCHH
Confidence            5799999999986432  34567889999999999999998884 33 455555411   110      000101 1111


Q ss_pred             ChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          218 NPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                      ..=+.+.+-.-++-..+++..+++...++-..|+|.+..
T Consensus       149 ~ig~gt~LDs~R~r~~la~~l~v~~~~v~~~~V~GeHG~  187 (325)
T cd01336         149 NFTALTRLDHNRAKSQIALKLGVPVSDVKNVIIWGNHSS  187 (325)
T ss_pred             HEEeeehHHHHHHHHHHHHHhCcChhhceEeEEEEcCCC
Confidence            111112233334444555557888888888889998643

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.92  E-value=7.5e-09  Score=92.84  Aligned_cols=168  Identities=13%  Similarity=0.099  Sum_probs=114.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-------eEEEEecCCCC--cchhhhhhhhhC-CCCCceEEEEccCCCHHHHHHH
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRG--NIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKF  140 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-------~V~~~~r~~~~--~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~  140 (296)
                      ++|.|+|++|.||..++..|+..|.       +++++|.....  .......+.... ....++.+.   -.+.    +.
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~---~~~~----~~   75 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT---DDPN----VA   75 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe---cCcH----HH
Confidence            6899999999999999999998875       79999874322  222222222111 110112211   1122    22


Q ss_pred             hhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCC-C-EEEEEccc---ccccCCCCCCCCCCCC-C
Q 022471          141 FSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-D-TLIYSSTC---ATYGEPEKMPITEETP-Q  214 (296)
Q Consensus       141 ~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~-riV~~SS~---~~~g~~~~~~~~e~~~-~  214 (296)
                      +  .+.|+||.+||....+  ..+..+.++.|+...+.+.+.+.+.+. . .+|.+|.-   ..|-      .....+ .
T Consensus        76 ~--~daDivvitaG~~~k~--g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~------~~k~sg~~  145 (322)
T cd01338          76 F--KDADWALLVGAKPRGP--GMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALI------AMKNAPDI  145 (322)
T ss_pred             h--CCCCEEEEeCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHH------HHHHcCCC
Confidence            3  5789999999975432  345677899999999999999998873 4 45555531   1110      111222 5


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                      ++...|+.+++..+++...+++..|++...++..+|||++.
T Consensus       146 p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG  186 (322)
T cd01338         146 PPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHS  186 (322)
T ss_pred             ChHheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCc
Confidence            56778999999999999999999999999999999999983

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK09620 hypothetical protein; Provisional

Probab=98.82  E-value=1.3e-08  Score=86.90  Aligned_cols=84  Identities=19%  Similarity=0.150  Sum_probs=58.3

Q ss_pred             ccEEEEEcCC----------------ChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC
Q 022471           70 VTHVLVTGGA----------------GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD  133 (296)
Q Consensus        70 ~k~vlVTGas----------------G~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d  133 (296)
                      +|+||||+|.                |++|+++|++|+++|++|+++++........      . +....+..+..|...
T Consensus         3 gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~------~-~~~~~~~~V~s~~d~   75 (229)
T PRK09620          3 GKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPND------I-NNQLELHPFEGIIDL   75 (229)
T ss_pred             CCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcc------c-CCceeEEEEecHHHH
Confidence            3899999886                9999999999999999999988543211100      0 001233445554444


Q ss_pred             HHHHHHHhhcCCCcEEEEcccccCcCC
Q 022471          134 AKAVNKFFSENAFDAVMHFAAVAYVGE  160 (296)
Q Consensus       134 ~~~v~~~~~~~~~D~vi~~Ag~~~~~~  160 (296)
                      .+.+.+++.+.++|+|||+|++....+
T Consensus        76 ~~~l~~~~~~~~~D~VIH~AAvsD~~~  102 (229)
T PRK09620         76 QDKMKSIITHEKVDAVIMAAAGSDWVV  102 (229)
T ss_pred             HHHHHHHhcccCCCEEEECccccceec
Confidence            467777776557999999999865543

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.80  E-value=1.4e-08  Score=86.76  Aligned_cols=82  Identities=16%  Similarity=0.197  Sum_probs=55.6

Q ss_pred             EEEEc-CCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CCC
Q 022471           73 VLVTG-GAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NAF  146 (296)
Q Consensus        73 vlVTG-asG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~~  146 (296)
                      =.||. +|||||+++|++|+++|++|+++++...        +..     .  ....+|+++.+++.++++.     +++
T Consensus        17 R~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~-----~--~~~~~Dv~d~~s~~~l~~~v~~~~g~i   81 (227)
T TIGR02114        17 RSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKP-----E--PHPNLSIREIETTKDLLITLKELVQEH   81 (227)
T ss_pred             eeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------ccc-----c--cCCcceeecHHHHHHHHHHHHHHcCCC
Confidence            34554 4889999999999999999999875210        000     0  0135799998888776543     679


Q ss_pred             cEEEEcccccCcCCCCcChHHHH
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYY  169 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~  169 (296)
                      |++|||||+....+..+...+.|
T Consensus        82 DiLVnnAgv~d~~~~~~~s~e~~  104 (227)
T TIGR02114        82 DILIHSMAVSDYTPVYMTDLEQV  104 (227)
T ss_pred             CEEEECCEeccccchhhCCHHHH
Confidence            99999999865544333333333

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.80  E-value=2.7e-08  Score=90.38  Aligned_cols=92  Identities=26%  Similarity=0.408  Sum_probs=72.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      ||+|||.|+ |+||+.+|+.|+++| .+|++++|+..+..+..+..      ..+++..++|+.|.+++.++++  +.|+
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~------~~~v~~~~vD~~d~~al~~li~--~~d~   71 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI------GGKVEALQVDAADVDALVALIK--DFDL   71 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc------cccceeEEecccChHHHHHHHh--cCCE
Confidence            589999998 999999999999999 89999998765544333221      2478999999999999999995  4699


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCC
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV  188 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~  188 (296)
                      |||++....                  +..++++|.+.|+
T Consensus        72 VIn~~p~~~------------------~~~i~ka~i~~gv   93 (389)
T COG1748          72 VINAAPPFV------------------DLTILKACIKTGV   93 (389)
T ss_pred             EEEeCCchh------------------hHHHHHHHHHhCC
Confidence            999986421                  1257777777765

>PRK05086 malate dehydrogenase; Provisional

Probab=98.73  E-value=3.4e-07  Score=81.97  Aligned_cols=170  Identities=17%  Similarity=0.055  Sum_probs=102.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHh---CCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLK---DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~---~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      |+|+|.||+|+||++++..|..   .+++++++++++. .....-.+.   .. .....+.+  .+.+++.+.+  .++|
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~---~~-~~~~~i~~--~~~~d~~~~l--~~~D   71 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLS---HI-PTAVKIKG--FSGEDPTPAL--EGAD   71 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-Ccceehhhh---cC-CCCceEEE--eCCCCHHHHc--CCCC
Confidence            6899999999999999998855   3568888887532 111001111   10 11112222  1223333444  4699


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccccc----ccCCCCCCCCCCCCCCCCChHHHH
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCAT----YGEPEKMPITEETPQAPINPYGKA  223 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~----~g~~~~~~~~e~~~~~~~~~Y~~s  223 (296)
                      +||.++|....+  ..+..+.+..|......+++.+.+.+.+++|.+.|--+    |--...  +......++....+.+
T Consensus        72 iVIitaG~~~~~--~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsNP~D~~t~~~~~~--~~~~sg~p~~rvig~~  147 (312)
T PRK05086         72 VVLISAGVARKP--GMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITNPVNTTVAIAAEV--LKKAGVYDKNKLFGVT  147 (312)
T ss_pred             EEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchHHHHHHHHHH--HHHhcCCCHHHEEeee
Confidence            999999975432  23567789999999999999999999889998888322    100000  0000001111112222


Q ss_pred             HHHHHHHHHHhhhcCCCcEEEEecCeeecCC
Q 022471          224 KKMAEDIILDFSKNSDMAVMILRYFNVIGSD  254 (296)
Q Consensus       224 K~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~  254 (296)
                      -.-..++...+++..+++..-++ +.|+|.+
T Consensus       148 ~Lds~R~~~~ia~~l~~~~~~v~-~~v~GeH  177 (312)
T PRK05086        148 TLDVIRSETFVAELKGKQPGEVE-VPVIGGH  177 (312)
T ss_pred             cHHHHHHHHHHHHHhCCChhheE-EEEEEec
Confidence            23334566666666888888887 8899988

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.73  E-value=4.6e-08  Score=90.07  Aligned_cols=76  Identities=24%  Similarity=0.180  Sum_probs=59.7

Q ss_pred             ccEEEEEcC----------------CChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC
Q 022471           70 VTHVLVTGG----------------AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD  133 (296)
Q Consensus        70 ~k~vlVTGa----------------sG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d  133 (296)
                      +|+|+||||                ||++|.++|++|+++|++|++++++.. ..         .  +..  ...+|+++
T Consensus       188 gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~---------~--~~~--~~~~dv~~  253 (399)
T PRK05579        188 GKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP---------T--PAG--VKRIDVES  253 (399)
T ss_pred             CCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc---------C--CCC--cEEEccCC
Confidence            389999999                777999999999999999999986431 10         0  112  34689999


Q ss_pred             HHHHHHHhhc--CCCcEEEEcccccCcC
Q 022471          134 AKAVNKFFSE--NAFDAVMHFAAVAYVG  159 (296)
Q Consensus       134 ~~~v~~~~~~--~~~D~vi~~Ag~~~~~  159 (296)
                      .+++.+++.+  +++|++|||||+....
T Consensus       254 ~~~~~~~v~~~~~~~DilI~~Aav~d~~  281 (399)
T PRK05579        254 AQEMLDAVLAALPQADIFIMAAAVADYR  281 (399)
T ss_pred             HHHHHHHHHHhcCCCCEEEEcccccccc
Confidence            9988888765  6799999999986543

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.68  E-value=1e-07  Score=81.51  Aligned_cols=75  Identities=20%  Similarity=0.174  Sum_probs=48.8

Q ss_pred             EEEEE-cCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC--HHHHHHHhhcCCCcE
Q 022471           72 HVLVT-GGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD--AKAVNKFFSENAFDA  148 (296)
Q Consensus        72 ~vlVT-GasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~D~  148 (296)
                      +-.|| .+||+||+++|++|+++|++|++++|......        .  ...++.++.++-.+  .+.+.+.+  .++|+
T Consensus        17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~--------~--~~~~v~~i~v~s~~~m~~~l~~~~--~~~Di   84 (229)
T PRK06732         17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP--------E--PHPNLSIIEIENVDDLLETLEPLV--KDHDV   84 (229)
T ss_pred             ceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC--------C--CCCCeEEEEEecHHHHHHHHHHHh--cCCCE
Confidence            34455 45667999999999999999999986432100        0  01345555543322  23444555  57999


Q ss_pred             EEEcccccCc
Q 022471          149 VMHFAAVAYV  158 (296)
Q Consensus       149 vi~~Ag~~~~  158 (296)
                      ||||||+...
T Consensus        85 vIh~AAvsd~   94 (229)
T PRK06732         85 LIHSMAVSDY   94 (229)
T ss_pred             EEeCCccCCc
Confidence            9999998653

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.61  E-value=2.2e-07  Score=82.36  Aligned_cols=84  Identities=15%  Similarity=0.122  Sum_probs=60.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCe-EEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      |+++|||| ||+|++++..|++.|++ |++++|+....+++.+..+++......+....+|+.+.+++.+.+  ...|+|
T Consensus       127 k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~--~~~Dil  203 (289)
T PRK12548        127 KKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEI--ASSDIL  203 (289)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhh--ccCCEE
Confidence            89999999 79999999999999996 999998652222333333333222234556678998888888777  457999


Q ss_pred             EEcccccC
Q 022471          150 MHFAAVAY  157 (296)
Q Consensus       150 i~~Ag~~~  157 (296)
                      |||-.+..
T Consensus       204 INaTp~Gm  211 (289)
T PRK12548        204 VNATLVGM  211 (289)
T ss_pred             EEeCCCCC
Confidence            99886543

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.54  E-value=3e-07  Score=76.75  Aligned_cols=79  Identities=23%  Similarity=0.208  Sum_probs=59.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      ++++|+||+|++|+.+++.|++.|++|++++|+..+.+...+.+...    .......+|..+.+++.+++  .+.|+||
T Consensus        29 ~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~----~~~~~~~~~~~~~~~~~~~~--~~~diVi  102 (194)
T cd01078          29 KTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRAR----FGEGVGAVETSDDAARAAAI--KGADVVF  102 (194)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhh----cCCcEEEeeCCCHHHHHHHH--hcCCEEE
Confidence            89999999999999999999999999999987644333333322211    23445577889999988888  5689999


Q ss_pred             Ecccc
Q 022471          151 HFAAV  155 (296)
Q Consensus       151 ~~Ag~  155 (296)
                      ++...
T Consensus       103 ~at~~  107 (194)
T cd01078         103 AAGAA  107 (194)
T ss_pred             ECCCC
Confidence            97653

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.52  E-value=3e-07  Score=84.42  Aligned_cols=104  Identities=18%  Similarity=0.120  Sum_probs=71.1

Q ss_pred             ccEEEEEcC---------------CCh-hhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC
Q 022471           70 VTHVLVTGG---------------AGY-IGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD  133 (296)
Q Consensus        70 ~k~vlVTGa---------------sG~-IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d  133 (296)
                      +|+|+||||               |+| +|.+++++|..+|++|+++.+.....          .  +..  ...+|+++
T Consensus       185 ~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------~--~~~--~~~~~v~~  250 (390)
T TIGR00521       185 GKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------T--PPG--VKSIKVST  250 (390)
T ss_pred             CceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------C--CCC--cEEEEecc
Confidence            399999999               445 99999999999999999987543211          0  122  24689999


Q ss_pred             HHHH-HHHhhc--CCCcEEEEcccccCcCCCCcCh------HHHHHHHHHHHHHHHHHHHHcC
Q 022471          134 AKAV-NKFFSE--NAFDAVMHFAAVAYVGESTLDP------LKYYHNITSNTLVVLESMARHG  187 (296)
Q Consensus       134 ~~~v-~~~~~~--~~~D~vi~~Ag~~~~~~~~~~~------~~~~~~n~~~t~~ll~~~~~~~  187 (296)
                      .+++ ++++++  +++|++|||||+....+.+...      ...+..|+.-+..++..+++..
T Consensus       251 ~~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~  313 (390)
T TIGR00521       251 AEEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIK  313 (390)
T ss_pred             HHHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhC
Confidence            9888 555533  5799999999997654321111      1123345555777888887654

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.51  E-value=3.3e-06  Score=75.97  Aligned_cols=160  Identities=13%  Similarity=0.108  Sum_probs=98.8

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCC-------eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHH---------
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK---------  135 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---------  135 (296)
                      +|.|+||+|.+|+.++..|+..|.       +++++|+++...               .......|+.|..         
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~---------------~a~g~~~Dl~d~~~~~~~~~~~   65 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK---------------VLEGVVMELMDCAFPLLDGVVP   65 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc---------------ccceeEeehhcccchhcCceec
Confidence            589999999999999999998553       588998754321               1112233333322         


Q ss_pred             --HHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcC-CC-EEEEEcccc---cccCCCCCCC
Q 022471          136 --AVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VD-TLIYSSTCA---TYGEPEKMPI  208 (296)
Q Consensus       136 --~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~~-riV~~SS~~---~~g~~~~~~~  208 (296)
                        +..+.+  .+.|+||++||.....  .++..+.++.|+...+.+.+.+.+.. .. .+|.+|.-.   .|--      
T Consensus        66 ~~~~~~~~--~~aDiVVitAG~~~~~--~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPvDv~t~v~------  135 (324)
T TIGR01758        66 THDPAVAF--TDVDVAILVGAFPRKE--GMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPANTNALVL------  135 (324)
T ss_pred             cCChHHHh--CCCCEEEEcCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHH------
Confidence              222333  5799999999975432  23467789999999999999999984 54 455555311   1100      


Q ss_pred             CCCC-CCCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          209 TEET-PQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       209 ~e~~-~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                      .+.. .+++...=..+.+-.-++-..+++..++....++-..|+|.+..
T Consensus       136 ~~~sg~~~~~vig~gt~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~  184 (324)
T TIGR01758       136 SNYAPSIPPKNFSALTRLDHNRALAQVAERAGVPVSDVKNVIIWGNHSS  184 (324)
T ss_pred             HHHcCCCCcceEEEeeehHHHHHHHHHHHHhCCChhhceEeEEEECCCC
Confidence            0000 01111111223333445555666668888888888899998743

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.49  E-value=4.6e-07  Score=83.71  Aligned_cols=76  Identities=24%  Similarity=0.332  Sum_probs=56.4

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           73 VLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        73 vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+|.|| |++|+.+++.|++.+.  +|++.+|+..+.++..+.+     ...++.+.++|+.|.+++.+++  .+.|+||
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~-----~~~~~~~~~~d~~~~~~l~~~~--~~~dvVi   72 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL-----LGDRVEAVQVDVNDPESLAELL--RGCDVVI   72 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT-------TTTTEEEEE--TTTHHHHHHHH--TTSSEEE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc-----cccceeEEEEecCCHHHHHHHH--hcCCEEE
Confidence            789999 9999999999999874  8999997655443333221     2468999999999999999999  5679999


Q ss_pred             Eccccc
Q 022471          151 HFAAVA  156 (296)
Q Consensus       151 ~~Ag~~  156 (296)
                      ||+|..
T Consensus        73 n~~gp~   78 (386)
T PF03435_consen   73 NCAGPF   78 (386)
T ss_dssp             E-SSGG
T ss_pred             ECCccc
Confidence            999854

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>cd00704 MDH Malate dehydrogenase

Probab=98.46  E-value=1.1e-06  Score=79.03  Aligned_cols=167  Identities=15%  Similarity=0.151  Sum_probs=98.7

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCC-------eEEEEecCC--CCcchhhhhhhhhC-CCCCceEEEEccCCCHHHHHHHh
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLS--RGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFF  141 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~~  141 (296)
                      +|.||||+|.||+.++..|+..|.       +++++|++.  ...+.....+.... +.....     .++  ....+.+
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~-----~i~--~~~~~~~   74 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGV-----VIT--TDPEEAF   74 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCc-----EEe--cChHHHh
Confidence            699999999999999999998653       588998754  22111111111110 000011     111  1223444


Q ss_pred             hcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcC-CC-EEEEEcccc---cccCCCCCCCCCCCC-CC
Q 022471          142 SENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VD-TLIYSSTCA---TYGEPEKMPITEETP-QA  215 (296)
Q Consensus       142 ~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~~-riV~~SS~~---~~g~~~~~~~~e~~~-~~  215 (296)
                        .+.|+|||+||....+  .++-.+.+..|....+.+.+.+.+.. .. .+|.+|--.   .|-      ..+... .+
T Consensus        75 --~~aDiVVitAG~~~~~--g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~------~~k~sg~~p  144 (323)
T cd00704          75 --KDVDVAILVGAFPRKP--GMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNPANTNALI------ALKNAPNLP  144 (323)
T ss_pred             --CCCCEEEEeCCCCCCc--CCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHH------HHHHcCCCC
Confidence              6799999999975432  34667789999999999999999984 54 445554310   110      000111 12


Q ss_pred             CCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                      +...-+.+.+-..++-..+++..++....++-..|+|.+.
T Consensus       145 ~~~vig~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG  184 (323)
T cd00704         145 PKNFTALTRLDHNRAKAQVARKLGVRVSDVKNVIIWGNHS  184 (323)
T ss_pred             HHHEEEeeHHHHHHHHHHHHHHhCcCHHHceeeeEEeccc
Confidence            2122233445555555666666788777777777899864

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=98.41  E-value=0.00015  Score=57.59  Aligned_cols=161  Identities=16%  Similarity=0.148  Sum_probs=96.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHH-------HHHHhhc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKA-------VNKFFSE  143 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-------v~~~~~~  143 (296)
                      .+|+|-||-|-+|+++++.|.+++|-|.-+|-.+.+.  +           ..-..+..|-+=.++       +.+.+..
T Consensus         4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe~--A-----------d~sI~V~~~~swtEQe~~v~~~vg~sL~g   70 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ--A-----------DSSILVDGNKSWTEQEQSVLEQVGSSLQG   70 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc--c-----------cceEEecCCcchhHHHHHHHHHHHHhhcc
Confidence            5899999999999999999999999998887533211  1           111122233221222       2233333


Q ss_pred             CCCcEEEEcccccCcC-----CCCcChHHHHHHHHHHHHHHHHHHHHc-CCCEEEE-EcccccccCCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVG-----ESTLDPLKYYHNITSNTLVVLESMARH-GVDTLIY-SSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~-----~~~~~~~~~~~~n~~~t~~ll~~~~~~-~~~riV~-~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      .++|.|++-||--..+     ....+.+-+|...+.....-...+.++ ..+-+.. .+..+..           .+.+.
T Consensus        71 ekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl-----------~gTPg  139 (236)
T KOG4022|consen   71 EKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAAL-----------GGTPG  139 (236)
T ss_pred             cccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeeccccccc-----------CCCCc
Confidence            7899999999853322     223334445554444322222222221 1223443 3333333           34556


Q ss_pred             CChHHHHHHHHHHHHHHhhhc-CC----CcEEEEecCeeecCCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN-SD----MAVMILRYFNVIGSDP  255 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~-~g----i~~~~lrpg~v~Gp~~  255 (296)
                      +-.|+..|.++.+++++++.+ .|    --+..|-|-..-.|..
T Consensus       140 MIGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMN  183 (236)
T KOG4022|consen  140 MIGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMN  183 (236)
T ss_pred             ccchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccc
Confidence            788999999999999999877 44    3466677777777653

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=98.33  E-value=4e-05  Score=68.60  Aligned_cols=167  Identities=15%  Similarity=0.179  Sum_probs=101.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCcchhhhhhhhhCC-CCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      ++|.|.|+ |++|+.++..|+..|  ++|++++++....+.....+..... .+.......   .+.++    +  .+.|
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~~----l--~~aD   70 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYSD----C--KDAD   70 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHHH----h--CCCC
Confidence            47899996 999999999999999  5899999877665555555443321 112222222   23322    2  5789


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCE-EEEEcccc---cccCCCCCCCCCCCCCCCCChHHH-
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT-LIYSSTCA---TYGEPEKMPITEETPQAPINPYGK-  222 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~r-iV~~SS~~---~~g~~~~~~~~e~~~~~~~~~Y~~-  222 (296)
                      +||+++|....+  ..+..+.++.|....+.+.+.+++.+..- ++.+|.-.   .|--      ......++....+. 
T Consensus        71 IVIitag~~~~~--g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsNP~d~~~~~~------~~~~g~p~~~v~g~g  142 (306)
T cd05291          71 IVVITAGAPQKP--GETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASNPVDVITYVV------QKLSGLPKNRVIGTG  142 (306)
T ss_pred             EEEEccCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecChHHHHHHHH------HHHhCcCHHHEeecc
Confidence            999999975432  33556789999999999999999987654 44444310   1100      00001111111222 


Q ss_pred             HHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          223 AKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       223 sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                      +-+-..++-..+++..+++...++. .|+|.+..
T Consensus       143 t~LDs~R~~~~la~~l~v~~~~v~~-~V~G~Hg~  175 (306)
T cd05291         143 TSLDTARLRRALAEKLNVDPRSVHA-YVLGEHGD  175 (306)
T ss_pred             chHHHHHHHHHHHHHHCCCcccceE-EEEecCCC
Confidence            1222334444555557777777775 79998743

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.33  E-value=1.7e-06  Score=76.42  Aligned_cols=84  Identities=8%  Similarity=0.160  Sum_probs=67.4

Q ss_pred             EEEEEcCCChhhHHHHHHHHh----CCCeEEEEecCCCCcchhhhhhhhhCCCC-CceEEEEccCCCHHHHHHHhhcCCC
Q 022471           72 HVLVTGGAGYIGSHAALRLLK----DSYRVTIVDNLSRGNIGAVKVLQELFPEP-GRLQFIYADLGDAKAVNKFFSENAF  146 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (296)
                      .++|-|||||.|..+++++++    .|...-+.+|+..+..+..+.+.+..+.+ .....+.+|..|++++.+.+  .+.
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~ema--k~~   84 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMA--KQA   84 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHH--hhh
Confidence            589999999999999999999    78899999988877766666655443221 22337889999999999999  568


Q ss_pred             cEEEEcccccC
Q 022471          147 DAVMHFAAVAY  157 (296)
Q Consensus       147 D~vi~~Ag~~~  157 (296)
                      -+|+||+|...
T Consensus        85 ~vivN~vGPyR   95 (423)
T KOG2733|consen   85 RVIVNCVGPYR   95 (423)
T ss_pred             EEEEeccccce
Confidence            99999999643

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=98.32  E-value=2.6e-05  Score=69.95  Aligned_cols=113  Identities=19%  Similarity=0.201  Sum_probs=79.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +||.|+|+ |.+|..++..|+..|.  +++++|++..........+....+...++....   .+.++    +  .+.|+
T Consensus         7 ~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~---~~~~~----~--~~adi   76 (315)
T PRK00066          7 NKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA---GDYSD----C--KDADL   76 (315)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe---CCHHH----h--CCCCE
Confidence            79999998 9999999999999987  799999876655544444444332112233222   23222    3  57899


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCE-EEEEc
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT-LIYSS  195 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~r-iV~~S  195 (296)
                      ||-.||....+  ..+..+.++.|....+.+++.+++.+.+- +|.+|
T Consensus        77 vIitag~~~k~--g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         77 VVITAGAPQKP--GETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             EEEecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            99999985432  23556789999999999999999887654 44444

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.27  E-value=9.5e-06  Score=70.41  Aligned_cols=75  Identities=15%  Similarity=0.163  Sum_probs=57.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+|||+||||. |+.++++|.++|++|++..+.........+         .....+..+..|.+++.+++.+.++|+||
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~---------~g~~~v~~g~l~~~~l~~~l~~~~i~~VI   70 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI---------HQALTVHTGALDPQELREFLKRHSIDILV   70 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc---------cCCceEEECCCCHHHHHHHHHhcCCCEEE
Confidence            57999999999 999999999999999998876543322111         11233456777888899999888899999


Q ss_pred             Ecccc
Q 022471          151 HFAAV  155 (296)
Q Consensus       151 ~~Ag~  155 (296)
                      +.+..
T Consensus        71 DAtHP   75 (256)
T TIGR00715        71 DATHP   75 (256)
T ss_pred             EcCCH
Confidence            98753

This enzyme was found to be a monomer by gel filtration.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.25  E-value=1.2e-05  Score=63.47  Aligned_cols=115  Identities=21%  Similarity=0.256  Sum_probs=77.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCCC-CCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPE-PGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      +||.|+||+|.+|++++..|+..+.  +++++|++....+.....+...... ........   .+.++    +  .+.|
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~----~--~~aD   71 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEA----L--KDAD   71 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGG----G--TTES
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---ccccc----c--cccc
Confidence            5899999999999999999999864  8999997654433333333332111 11222222   22222    2  5789


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcc
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS  196 (296)
                      +||-+||....+  ..+..+.++.|....+.+.+.+.+.+.. .++.+|.
T Consensus        72 ivvitag~~~~~--g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvtN  119 (141)
T PF00056_consen   72 IVVITAGVPRKP--GMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVTN  119 (141)
T ss_dssp             EEEETTSTSSST--TSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-SS
T ss_pred             EEEEeccccccc--cccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeCC
Confidence            999999975432  2356778899999999999999998764 4444443

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=98.17  E-value=3.8e-05  Score=69.04  Aligned_cols=169  Identities=13%  Similarity=0.109  Sum_probs=103.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-------eEEEEecCCCC--cchhhhhhhhhC-CCCCceEEEEccCCCHHHHHHH
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRG--NIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKF  140 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-------~V~~~~r~~~~--~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~  140 (296)
                      .+|.|+|++|++|++++..|+..|.       +++++|.+...  .......+.... ....++.. ..     ++.+ .
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-~~-----~~~~-~   76 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVA-TT-----DPEE-A   76 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEE-ec-----ChHH-H
Confidence            5899999999999999999998874       79999875421  222222222211 11111211 11     1222 2


Q ss_pred             hhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCC-CEEEEEcccc----cccCCCCCCCCCCC-CC
Q 022471          141 FSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSSTCA----TYGEPEKMPITEET-PQ  214 (296)
Q Consensus       141 ~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~riV~~SS~~----~~g~~~~~~~~e~~-~~  214 (296)
                      +  .+.|+||.+||....  ..++..+.+..|....+.+.+.+.+.+. .-++.+-|--    .|-      ..+.. ..
T Consensus        77 ~--~daDvVVitAG~~~k--~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v------~~k~s~g~  146 (323)
T TIGR01759        77 F--KDVDAALLVGAFPRK--PGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPANTNALI------ASKNAPDI  146 (323)
T ss_pred             h--CCCCEEEEeCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHH------HHHHcCCC
Confidence            2  578999999997543  2346677899999999999999999875 5444444411    110      00011 11


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                      ++....|.+.+-.-++-..+++..++....++-..|+|.+..
T Consensus       147 p~~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~  188 (323)
T TIGR01759       147 PPKNFSAMTRLDHNRAKYQLAAKAGVPVSDVKNVIIWGNHSN  188 (323)
T ss_pred             CHHHEEEeeHHHHHHHHHHHHHHhCcChHHeEEeEEEecCCC
Confidence            222223334455556666667778888888888889998743

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.13  E-value=7.2e-06  Score=73.77  Aligned_cols=71  Identities=20%  Similarity=0.146  Sum_probs=49.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhC-C-CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKD-S-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~-G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      +|+|+||||+|.||++++++|+++ | .+++++.|+..+.....+   ++         ...|+.   ++.+++  .+.|
T Consensus       155 ~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~---el---------~~~~i~---~l~~~l--~~aD  217 (340)
T PRK14982        155 KATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQA---EL---------GGGKIL---SLEEAL--PEAD  217 (340)
T ss_pred             CCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHH---Hh---------ccccHH---hHHHHH--ccCC
Confidence            389999999999999999999865 5 588888875433322221   11         113333   355666  5689


Q ss_pred             EEEEcccccC
Q 022471          148 AVMHFAAVAY  157 (296)
Q Consensus       148 ~vi~~Ag~~~  157 (296)
                      +|||+++...
T Consensus       218 iVv~~ts~~~  227 (340)
T PRK14982        218 IVVWVASMPK  227 (340)
T ss_pred             EEEECCcCCc
Confidence            9999998754

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.12  E-value=7.6e-05  Score=70.53  Aligned_cols=173  Identities=17%  Similarity=0.157  Sum_probs=110.9

Q ss_pred             ccEEEEEcCC-ChhhHHHHHHHHhCCCeEEEEecC-CCCcchhhhhhh-hhCCCCCceEEEEccCCCHHHHHHHhhc---
Q 022471           70 VTHVLVTGGA-GYIGSHAALRLLKDSYRVTIVDNL-SRGNIGAVKVLQ-ELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (296)
Q Consensus        70 ~k~vlVTGas-G~IG~~la~~L~~~G~~V~~~~r~-~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (296)
                      .+.++||||+ |-||.+++..|+.-|+.|++...+ .+...+..+.+- .....+..+..+..+..+..+++.+++.   
T Consensus       396 d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg~  475 (866)
T COG4982         396 DKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIGD  475 (866)
T ss_pred             cceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhcc
Confidence            3899999987 679999999999999999987532 222222222221 1122234566778899988888887754   


Q ss_pred             ----------------CCCcEEEEcccccCcCC-CCcC--hHHHHHHHHHHHHHHHHHHHHcCCC-------EEEEEccc
Q 022471          144 ----------------NAFDAVMHFAAVAYVGE-STLD--PLKYYHNITSNTLVVLESMARHGVD-------TLIYSSTC  197 (296)
Q Consensus       144 ----------------~~~D~vi~~Ag~~~~~~-~~~~--~~~~~~~n~~~t~~ll~~~~~~~~~-------riV~~SS~  197 (296)
                                      ..+|.+|-.|++...+. ....  .+..+.+-+...++++-.+++.+..       ++|.-.|-
T Consensus       476 eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPgSP  555 (866)
T COG4982         476 EQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPGSP  555 (866)
T ss_pred             ccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecCCC
Confidence                            23788999998754432 1112  2334455555566777766665422       45555551


Q ss_pred             ccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhcCC----CcEEEEecCeeecCC
Q 022471          198 ATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSD----MAVMILRYFNVIGSD  254 (296)
Q Consensus       198 ~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g----i~~~~lrpg~v~Gp~  254 (296)
                      ..            --......|+.||.+.+.+...|..|.+    +..+-.+.|++-|.+
T Consensus       556 Nr------------G~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTG  604 (866)
T COG4982         556 NR------------GMFGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTG  604 (866)
T ss_pred             CC------------CccCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeecccc
Confidence            10            0122357899999999999999988742    445556667777665

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=98.12  E-value=0.00015  Score=64.99  Aligned_cols=116  Identities=15%  Similarity=0.180  Sum_probs=73.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCC--CCcchhhhhhhhhC-CCCCceEEEEccCCCHHHHHHHhhcCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLS--RGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFSENA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~--~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~~~~~~  145 (296)
                      |+|.|+|++|.+|+.++..|+..|+  +|+++++..  .........+.... ..+....   ...++  +.+. +  .+
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~---i~~~~--d~~~-l--~~   72 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAE---IKISS--DLSD-V--AG   72 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcE---EEECC--CHHH-h--CC
Confidence            5899999999999999999999987  499999843  22211111111110 0111111   11111  1222 3  57


Q ss_pred             CcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcc
Q 022471          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS  196 (296)
                      .|++|-++|....+  ..+..+.++.|..-.+.+++.+.+.... .+|.+++
T Consensus        73 aDiViitag~p~~~--~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n  122 (309)
T cd05294          73 SDIVIITAGVPRKE--GMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN  122 (309)
T ss_pred             CCEEEEecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            89999999975321  2234677889999999999999887644 5666665

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=98.09  E-value=2.7e-05  Score=69.45  Aligned_cols=166  Identities=14%  Similarity=0.083  Sum_probs=100.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      ++|.|+|++|.+|++++..|+..|.  +++++|.+  ..+.....+....   .........  ..+++.+.+  .+.|+
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~---~~~~i~~~~--~~~~~y~~~--~daDi   71 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHIN---TPAKVTGYL--GPEELKKAL--KGADV   71 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCC---CcceEEEec--CCCchHHhc--CCCCE
Confidence            5799999999999999999998884  89999976  2222222222111   111111110  111233334  57899


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCE-EEEEcccc-------cccCCCCCCCCCCCCCCCCChH
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT-LIYSSTCA-------TYGEPEKMPITEETPQAPINPY  220 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~r-iV~~SS~~-------~~g~~~~~~~~e~~~~~~~~~Y  220 (296)
                      ||-+||....+  ..+..+.++.|....+.+.+.+++.+..- +|.+|--.       .|--      ......++....
T Consensus        72 vvitaG~~~k~--g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtNPvDv~~~i~t~~~------~~~s~~p~~rvi  143 (310)
T cd01337          72 VVIPAGVPRKP--GMTRDDLFNINAGIVRDLATAVAKACPKALILIISNPVNSTVPIAAEVL------KKAGVYDPKRLF  143 (310)
T ss_pred             EEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchhhHHHHHHHHH------HHhcCCCHHHEE
Confidence            99999975432  34677889999999999999999987654 44444411       1100      000111111122


Q ss_pred             HHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCC
Q 022471          221 GKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSD  254 (296)
Q Consensus       221 ~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~  254 (296)
                      |.+-.-..++-..++++.|++...++ ++|+|.|
T Consensus       144 G~~~LDs~R~~~~la~~l~v~~~~V~-~~v~GeH  176 (310)
T cd01337         144 GVTTLDVVRANTFVAELLGLDPAKVN-VPVIGGH  176 (310)
T ss_pred             eeechHHHHHHHHHHHHhCcCHHHEE-EEEEecC
Confidence            22223445566667777888887887 8999988

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=98.07  E-value=0.0002  Score=62.68  Aligned_cols=197  Identities=11%  Similarity=0.017  Sum_probs=113.6

Q ss_pred             EEEEcCCChhhHHHHHHHHhCC----CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           73 VLVTGGAGYIGSHAALRLLKDS----YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        73 vlVTGasG~IG~~la~~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      |.|.||+|.+|..++..|+..|    .+|+++|+++...+.....++......     ....++-.++..+.+  .+.|+
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~-----~~~~i~~~~d~~~~~--~~aDi   73 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL-----ADIKVSITDDPYEAF--KDADV   73 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc-----cCcEEEECCchHHHh--CCCCE
Confidence            4699999999999999999999    799999987766655555554442221     011111112234444  57899


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCE-EEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHH
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT-LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~r-iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~  227 (296)
                      ||..+|.....  ..........|+...+.+.+.+.+....- +|.+|--.-.-..   ........++....|..-...
T Consensus        74 Vv~t~~~~~~~--g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~tNP~d~~t~---~~~~~sg~~~~kviG~~~ld~  148 (263)
T cd00650          74 VIITAGVGRKP--GMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVSNPVDIITY---LVWRYSGLPKEKVIGLGTLDP  148 (263)
T ss_pred             EEECCCCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHH---HHHHHhCCCchhEEEeecchH
Confidence            99999875432  23445677889999999999998887544 4444431100000   000000011111111111233


Q ss_pred             HHHHHHhhhcCCCcEEEEecCeeecCCCCC-CCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          228 EDIILDFSKNSDMAVMILRYFNVIGSDPEG-RLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       228 e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      .++-..+++..+++..-++ +.|+|.+... .+-+....    .+..+..+++++..++.
T Consensus       149 ~r~~~~la~~l~v~~~~v~-~~v~G~hg~~~~~~~s~~~----~a~~~~~ii~ai~~~~~  203 (263)
T cd00650         149 IRFRRILAEKLGVDPDDVK-VYILGEHGGSQVPDWSTVR----IATSIADLIRSLLNDEG  203 (263)
T ss_pred             HHHHHHHHHHhCCCccceE-EEEEEcCCCceEeccccch----HHHHHHHHHHHHHcCCC
Confidence            3344445555788888888 8999987431 11111000    34567778888888766

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.99  E-value=0.00014  Score=64.60  Aligned_cols=165  Identities=16%  Similarity=0.106  Sum_probs=99.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +||.|+|| |+||+.++..|+.++.  +++++|......+.....+.........-..+.+| .+.+++      .+.|+
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~~~------~~aDi   72 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYEDL------KGADI   72 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChhhh------cCCCE
Confidence            57999999 9999999999988753  89999987444333332222221110111222333 222222      57899


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccc----cccCCCCCCCCCCCCCC-CCChHHHH
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCA----TYGEPEKMPITEETPQA-PINPYGKA  223 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~----~~g~~~~~~~~e~~~~~-~~~~Y~~s  223 (296)
                      |+-.||...-+.  .+-.+.++.|......+.+.+.+.+.+-++.+-|--    .|--.      +..+.+ ..-.-+.+
T Consensus        73 VvitAG~prKpG--mtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvtNPvD~~ty~~~------k~sg~p~~rvig~gt  144 (313)
T COG0039          73 VVITAGVPRKPG--MTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVTNPVDILTYIAM------KFSGFPKNRVIGSGT  144 (313)
T ss_pred             EEEeCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEecCcHHHHHHHHH------HhcCCCccceecccc
Confidence            999999765432  356678999999999999999999876666655521    11000      001111 11123344


Q ss_pred             HHHHHHHHHHhhhcCCCcEEEEecCeee
Q 022471          224 KKMAEDIILDFSKNSDMAVMILRYFNVI  251 (296)
Q Consensus       224 K~~~e~~~~~~~~~~gi~~~~lrpg~v~  251 (296)
                      .+-..++-..+++..++....++-..+-
T Consensus       145 ~LDsaR~~~~lae~~~v~~~~V~~~ViG  172 (313)
T COG0039         145 VLDSARFRTFLAEKLGVSPKDVHAYVIG  172 (313)
T ss_pred             hHHHHHHHHHHHHHhCCChhHceeeEec
Confidence            5555666667777788877777654443

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.97  E-value=9.3e-05  Score=68.92  Aligned_cols=169  Identities=9%  Similarity=0.059  Sum_probs=105.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhC-------CC--eEEEEecCCCCcchhhhhhhhhC-CCCCceEEEEccCCCHHHHHHH
Q 022471           71 THVLVTGGAGYIGSHAALRLLKD-------SY--RVTIVDNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKF  140 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~-------G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~  140 (296)
                      -+|.|+|++|.+|.+++..|+..       |.  ++++++++....+.....+.... +...++.+. .  .+.+++   
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~-~--~~ye~~---  174 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIG-I--DPYEVF---  174 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEe-c--CCHHHh---
Confidence            58999999999999999999988       65  78888887666555444444332 111122211 1  233322   


Q ss_pred             hhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHH-cCCC-EEEEEcccc---cccCCCCCCCCCCCCCC
Q 022471          141 FSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMAR-HGVD-TLIYSSTCA---TYGEPEKMPITEETPQA  215 (296)
Q Consensus       141 ~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~-~~~~-riV~~SS~~---~~g~~~~~~~~e~~~~~  215 (296)
                         .+.|+||-.||....+  ..+-.+.++.|....+.+.+.+.+ .+.. .+|.+|--.   .|-      ..+..+..
T Consensus       175 ---kdaDiVVitAG~prkp--G~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPvDv~t~v------~~k~sg~~  243 (444)
T PLN00112        175 ---QDAEWALLIGAKPRGP--GMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGNPCNTNALI------CLKNAPNI  243 (444)
T ss_pred             ---CcCCEEEECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcHHHHHHH------HHHHcCCC
Confidence               5789999999975432  346677899999999999999999 4544 455555411   110      00001111


Q ss_pred             -CCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          216 -PINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       216 -~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                       ....=..+.+--.++-..+++..++....|+-+.|+|.+.+
T Consensus       244 ~~rViGtgT~LDsaR~r~~LA~~l~V~~~~V~~~~V~GeHGd  285 (444)
T PLN00112        244 PAKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHST  285 (444)
T ss_pred             CcceEEeeccHHHHHHHHHHHHHhCcCHHHcccceEEecCCC
Confidence             11222223334445555666668888888888899998743

>PRK05442 malate dehydrogenase; Provisional

Probab=97.92  E-value=0.00032  Score=63.16  Aligned_cols=169  Identities=14%  Similarity=0.105  Sum_probs=99.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC-------eEEEEecCCCC--cchhhhhhhhhC-CCCCceEEEEccCCCHHHHHH
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRG--NIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNK  139 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~-------~V~~~~r~~~~--~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~  139 (296)
                      +++|.|+|++|.+|+.++..|+..|.       +++++|.++..  .......+.... +...++.+     +. ++. +
T Consensus         4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-----~~-~~y-~   76 (326)
T PRK05442          4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-----TD-DPN-V   76 (326)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-----ec-ChH-H
Confidence            37899999999999999999988764       78899875321  222222222211 11112221     11 112 2


Q ss_pred             HhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcC-CC-EEEEEcccc---cccCCCCCCCCCCC-C
Q 022471          140 FFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VD-TLIYSSTCA---TYGEPEKMPITEET-P  213 (296)
Q Consensus       140 ~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~~-riV~~SS~~---~~g~~~~~~~~e~~-~  213 (296)
                      .+  .+.|+||-+||....+  .++..+.++.|....+.+.+.+.+.. .. .+|.+|.-.   .|--      .+.. .
T Consensus        77 ~~--~daDiVVitaG~~~k~--g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~------~k~s~g  146 (326)
T PRK05442         77 AF--KDADVALLVGARPRGP--GMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPANTNALIA------MKNAPD  146 (326)
T ss_pred             Hh--CCCCEEEEeCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCchHHHHHHH------HHHcCC
Confidence            22  5789999999975432  34677789999999999999999954 33 555555411   1100      0001 1


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCC
Q 022471          214 QAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       214 ~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                      .++....+.+-+-.-++-..+++..+++...++.-.|+|.+.
T Consensus       147 ~p~~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~vV~GeHG  188 (326)
T PRK05442        147 LPAENFTAMTRLDHNRALSQLAAKAGVPVADIKKMTVWGNHS  188 (326)
T ss_pred             CCHHHEEeeeHHHHHHHHHHHHHHhCcChHHeEEeEEEECCc
Confidence            111112222344445555666666788888887777788764

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.90  E-value=0.00018  Score=65.09  Aligned_cols=108  Identities=20%  Similarity=0.359  Sum_probs=70.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCC---------------------CcchhhhhhhhhCCCCCceEEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSR---------------------GNIGAVKVLQELFPEPGRLQFIY  128 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~  128 (296)
                      ++|+|.|+ |++|+++++.|++.|. +++++|++.-                     +.+.+.+.+++..+. .+++.+.
T Consensus        25 ~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~-v~i~~~~  102 (338)
T PRK12475         25 KHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSE-VEIVPVV  102 (338)
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCC-cEEEEEe
Confidence            78999996 8899999999999998 8888987531                     112223444444433 5667777


Q ss_pred             ccCCCHHHHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccccccc
Q 022471          129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYG  201 (296)
Q Consensus       129 ~Dl~d~~~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g  201 (296)
                      .|++ .+.+++++  .+.|+||.+..         +.+        .-..+-+++.+.+. .+|+.+..+.+|
T Consensus       103 ~~~~-~~~~~~~~--~~~DlVid~~D---------~~~--------~r~~in~~~~~~~i-p~i~~~~~g~~G  154 (338)
T PRK12475        103 TDVT-VEELEELV--KEVDLIIDATD---------NFD--------TRLLINDLSQKYNI-PWIYGGCVGSYG  154 (338)
T ss_pred             ccCC-HHHHHHHh--cCCCEEEEcCC---------CHH--------HHHHHHHHHHHcCC-CEEEEEecccEE
Confidence            7875 45677777  57899998763         111        11224455666664 577766555444

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.90  E-value=0.00017  Score=65.33  Aligned_cols=108  Identities=26%  Similarity=0.460  Sum_probs=71.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCC---------------------CcchhhhhhhhhCCCCCceEEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSR---------------------GNIGAVKVLQELFPEPGRLQFIY  128 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~  128 (296)
                      ++|+|.|+ ||+|+++++.|++.|. +++++|...-                     +.+.+.+.++++.+. -++..+.
T Consensus        25 ~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~-v~v~~~~  102 (339)
T PRK07688         25 KHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSD-VRVEAIV  102 (339)
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCC-cEEEEEe
Confidence            78999997 9999999999999998 8999987531                     111122334444332 4566666


Q ss_pred             ccCCCHHHHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccccccc
Q 022471          129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYG  201 (296)
Q Consensus       129 ~Dl~d~~~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g  201 (296)
                      .|++ .+.+.+++  .+.|+||.+..         +        ...-..+-+++.+.+. .+|+.++...+|
T Consensus       103 ~~~~-~~~~~~~~--~~~DlVid~~D---------n--------~~~r~~ln~~~~~~~i-P~i~~~~~g~~G  154 (339)
T PRK07688        103 QDVT-AEELEELV--TGVDLIIDATD---------N--------FETRFIVNDAAQKYGI-PWIYGACVGSYG  154 (339)
T ss_pred             ccCC-HHHHHHHH--cCCCEEEEcCC---------C--------HHHHHHHHHHHHHhCC-CEEEEeeeeeee
Confidence            7775 45566677  56899998753         1        2222345566777764 678877665554

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.87  E-value=7.5e-05  Score=61.61  Aligned_cols=76  Identities=22%  Similarity=0.276  Sum_probs=47.2

Q ss_pred             cEEEEEcC----------------CChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH
Q 022471           71 THVLVTGG----------------AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA  134 (296)
Q Consensus        71 k~vlVTGa----------------sG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~  134 (296)
                      |+||||+|                ||-.|.+||+++..+|++|+++.... ...           .+..+..  .++...
T Consensus         4 k~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~-~~~-----------~p~~~~~--i~v~sa   69 (185)
T PF04127_consen    4 KKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPS-SLP-----------PPPGVKV--IRVESA   69 (185)
T ss_dssp             -EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TT-S---------------TTEEE--EE-SSH
T ss_pred             CEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCc-ccc-----------ccccceE--EEecch
Confidence            78888876                79999999999999999999987542 110           0234544  445666


Q ss_pred             HHHHHHhhc--CCCcEEEEcccccCcCC
Q 022471          135 KAVNKFFSE--NAFDAVMHFAAVAYVGE  160 (296)
Q Consensus       135 ~~v~~~~~~--~~~D~vi~~Ag~~~~~~  160 (296)
                      +++.+.+.+  ...|++||+|++....+
T Consensus        70 ~em~~~~~~~~~~~Di~I~aAAVsDf~p   97 (185)
T PF04127_consen   70 EEMLEAVKELLPSADIIIMAAAVSDFRP   97 (185)
T ss_dssp             HHHHHHHHHHGGGGSEEEE-SB--SEEE
T ss_pred             hhhhhhhccccCcceeEEEecchhheee
Confidence            665555543  45699999999976543

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>cd05295 MDH_like Malate dehydrogenase-like

Probab=97.85  E-value=0.00023  Score=66.36  Aligned_cols=169  Identities=9%  Similarity=0.014  Sum_probs=100.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhC---CC----eEEEEecC--CCCcchhhhhhhhhC-CCCCceEEEEccCCCHHHHHHH
Q 022471           71 THVLVTGGAGYIGSHAALRLLKD---SY----RVTIVDNL--SRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKF  140 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~---G~----~V~~~~r~--~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~  140 (296)
                      -+|+||||+|.||++++-.+++-   |.    .++++|..  ....+....++.... +-...+... .  .+    .+.
T Consensus       124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~--~~----~ea  196 (452)
T cd05295         124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-T--DL----DVA  196 (452)
T ss_pred             eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-E--CC----HHH
Confidence            57999999999999999999873   42    35566652  222222222232221 111122222 1  12    233


Q ss_pred             hhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCC--CEEEEEccccc----ccCCCCCCCCCCC-C
Q 022471          141 FSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV--DTLIYSSTCAT----YGEPEKMPITEET-P  213 (296)
Q Consensus       141 ~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~--~riV~~SS~~~----~g~~~~~~~~e~~-~  213 (296)
                      +  .+.|++|-.||....+  ..+-.+..+.|....+.+.+.+.+.+.  .+|+.+.|--+    |-      ..... .
T Consensus       197 ~--~daDvvIitag~prk~--G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD~~t~i------~~k~apg  266 (452)
T cd05295         197 F--KDAHVIVLLDDFLIKE--GEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLNLKTSI------LIKYAPS  266 (452)
T ss_pred             h--CCCCEEEECCCCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHH------HHHHcCC
Confidence            3  5789999999975432  335677899999999999999998876  67777765111    10      00001 1


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          214 QAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       214 ~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                      .++...-+.+..--.++-..+++..|++...|+-..|+|.+..
T Consensus       267 iP~~rVig~gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG~  309 (452)
T cd05295         267 IPRKNIIAVARLQENRAKALLARKLNVNSAGIKDVIVWGNIGG  309 (452)
T ss_pred             CCHHHEEEecchHHHHHHHHHHHHhCcCHHHceeeEEEEccCC
Confidence            1112222222233444555666668888888888888888743

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=97.83  E-value=3.6e-05  Score=64.25  Aligned_cols=159  Identities=12%  Similarity=0.043  Sum_probs=103.1

Q ss_pred             cEEEEEcCCChhhHHHHH-----HHHhCC----CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHh
Q 022471           71 THVLVTGGAGYIGSHAAL-----RLLKDS----YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFF  141 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~-----~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~  141 (296)
                      ++.++-+++|+|+..|..     ++-+.+    |.|+++.|.+....               +.+-+.|..-.-      
T Consensus        13 r~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~r---------------itw~el~~~Gip------   71 (315)
T KOG3019|consen   13 RDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKAR---------------ITWPELDFPGIP------   71 (315)
T ss_pred             ccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCcc---------------cccchhcCCCCc------
Confidence            567888999999987765     343334    88999998765432               333233322110      


Q ss_pred             hcCCCcEEEEcccccCcCCCCcChHHHHHHHHHH-----HHHHHHHHHHcC--CCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          142 SENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN-----TLVVLESMARHG--VDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       142 ~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~-----t~~ll~~~~~~~--~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                        ..+|..+|.+|.....+.. .+...++.++.|     |..++++..+..  .+..|.+|..++|-......++|+.+.
T Consensus        72 --~sc~a~vna~g~n~l~P~r-RWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~  148 (315)
T KOG3019|consen   72 --ISCVAGVNAVGNNALLPIR-RWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVH  148 (315)
T ss_pred             --eehHHHHhhhhhhccCchh-hcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEecccccccccccccc
Confidence              1234444444432222211 333445555555     788888887653  457999999999977777778888888


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                      ......+.--.+.|..++.-.  ...+++++|.|.|.|.+.
T Consensus       149 qgfd~~srL~l~WE~aA~~~~--~~~r~~~iR~GvVlG~gG  187 (315)
T KOG3019|consen  149 QGFDILSRLCLEWEGAALKAN--KDVRVALIRIGVVLGKGG  187 (315)
T ss_pred             CChHHHHHHHHHHHHHhhccC--cceeEEEEEEeEEEecCC
Confidence            777776666666666665433  348999999999999763

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=97.82  E-value=0.00012  Score=73.57  Aligned_cols=168  Identities=15%  Similarity=0.130  Sum_probs=110.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEE-EEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~  145 (296)
                      |..+|+||-||.|.++++.|..+|++-. +..|+.-+.--....+......+-.+..-..|++..+..++++++    +.
T Consensus      1769 ksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl~~ 1848 (2376)
T KOG1202|consen 1769 KSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKLGP 1848 (2376)
T ss_pred             ceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhccc
Confidence            7899999999999999999999999654 455543222111222333333345666667889888888888876    66


Q ss_pred             CcEEEEcccccCcCCCCcChHHHHH----HHHHHHHHHHHHHHHcC--CCEEEEEcccccccCCCCCCCCCCCCCCCCCh
Q 022471          146 FDAVMHFAAVAYVGESTLDPLKYYH----NITSNTLVVLESMARHG--VDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~~~~~~~~~~~----~n~~~t~~ll~~~~~~~--~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~  219 (296)
                      +-.|||.|.+......++...+.|+    .-+.+|.++-..-++.-  .+.||..||...-           ....+.+-
T Consensus      1849 vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscG-----------RGN~GQtN 1917 (2376)
T KOG1202|consen 1849 VGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCG-----------RGNAGQTN 1917 (2376)
T ss_pred             ccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeeccc-----------CCCCcccc
Confidence            8889999998655444444444443    34455666665555442  4678888885431           11223677


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCcEEEEecCee
Q 022471          220 YGKAKKMAEDIILDFSKNSDMAVMILRYFNV  250 (296)
Q Consensus       220 Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v  250 (296)
                      ||.+..+.|..++.-.. .|++-+.|--|.|
T Consensus      1918 YG~aNS~MERiceqRr~-~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1918 YGLANSAMERICEQRRH-EGFPGTAIQWGAI 1947 (2376)
T ss_pred             cchhhHHHHHHHHHhhh-cCCCcceeeeecc
Confidence            99999999999987433 5666665555443

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.82  E-value=0.0015  Score=58.42  Aligned_cols=166  Identities=12%  Similarity=0.073  Sum_probs=100.0

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCCCC--CceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEP--GRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      ||.|.|+ |.||..+|..|+.+|.  +++++|.+..........+.....-.  .++.....   |.+++      .+.|
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~---~y~~~------~~aD   70 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAG---DYDDC------ADAD   70 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEEC---CHHHh------CCCC
Confidence            5789998 9999999999998875  79999976554444333333322111  13333332   33322      5789


Q ss_pred             EEEEcccccCcCCCCcC-hHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccc----cccCCCCCCCCCCCCCCCCChHHH
Q 022471          148 AVMHFAAVAYVGESTLD-PLKYYHNITSNTLVVLESMARHGVDTLIYSSTCA----TYGEPEKMPITEETPQAPINPYGK  222 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~-~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~----~~g~~~~~~~~e~~~~~~~~~Y~~  222 (296)
                      +||-+||....+. ... -.+.+..|....+.+.+.+++.+..-++.+-|--    .|--      .+....++....|.
T Consensus        71 ivvitaG~~~kpg-~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvsNPvDv~t~~~------~k~sg~p~~rviG~  143 (307)
T cd05290          71 IIVITAGPSIDPG-NTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILITNPLDIAVYIA------ATEFDYPANKVIGT  143 (307)
T ss_pred             EEEECCCCCCCCC-CCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCcHHHHHHHH------HHHhCcChhheecc
Confidence            9999999754321 111 4778999999999999999999866555555511    1100      00011111111222


Q ss_pred             -HHHHHHHHHHHhhhcCCCcEEEEecCeeecCCC
Q 022471          223 -AKKMAEDIILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       223 -sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                       +-+-..++-..+++..|+....++-. |+|.+.
T Consensus       144 gt~LDs~R~~~~la~~l~v~~~~V~~~-ViGeHG  176 (307)
T cd05290         144 GTMLDTARLRRIVADKYGVDPKNVTGY-VLGEHG  176 (307)
T ss_pred             cchHHHHHHHHHHHHHhCCCcccEEEE-EEecCC
Confidence             23333445555566678888777664 889874

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.78  E-value=0.00035  Score=65.85  Aligned_cols=125  Identities=15%  Similarity=0.087  Sum_probs=76.5

Q ss_pred             cEEE----EEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 022471           71 THVL----VTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (296)
Q Consensus        71 k~vl----VTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (296)
                      ..++    |+||+|++|.++++.|...|++|+...+......         .....++..+.+|.+..+..+++      
T Consensus        35 ~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~---------~~~~~~~~~~~~d~~~~~~~~~l------   99 (450)
T PRK08261         35 QPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWA---------AGWGDRFGALVFDATGITDPADL------   99 (450)
T ss_pred             CCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccc---------cCcCCcccEEEEECCCCCCHHHH------
Confidence            4555    8888999999999999999999998653222100         00001222222333322211111      


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHH
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKM  226 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~  226 (296)
                                             ..-.......++.+.+  .++||+++|....              .....|+.+|.+
T Consensus       100 -----------------------~~~~~~~~~~l~~l~~--~griv~i~s~~~~--------------~~~~~~~~akaa  140 (450)
T PRK08261        100 -----------------------KALYEFFHPVLRSLAP--CGRVVVLGRPPEA--------------AADPAAAAAQRA  140 (450)
T ss_pred             -----------------------HHHHHHHHHHHHhccC--CCEEEEEcccccc--------------CCchHHHHHHHH
Confidence                                   1111223334454433  3599999986542              113359999999


Q ss_pred             HHHHHHHhhhc--CCCcEEEEecCe
Q 022471          227 AEDIILDFSKN--SDMAVMILRYFN  249 (296)
Q Consensus       227 ~e~~~~~~~~~--~gi~~~~lrpg~  249 (296)
                      ...+++.+++|  .+++++.+.|+.
T Consensus       141 l~gl~rsla~E~~~gi~v~~i~~~~  165 (450)
T PRK08261        141 LEGFTRSLGKELRRGATAQLVYVAP  165 (450)
T ss_pred             HHHHHHHHHHHhhcCCEEEEEecCC
Confidence            99999999998  578999898864

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=97.77  E-value=0.00066  Score=59.91  Aligned_cols=164  Identities=11%  Similarity=0.119  Sum_probs=97.7

Q ss_pred             cEEEEEcC-CChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           71 THVLVTGG-AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        71 k~vlVTGa-sG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      ..|+|.|. +--|++.+|..|-++|+-|+++..+..+    .+.++...  ...+.....|..++.++...+.+     .
T Consensus         4 evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed----~~~ve~e~--~~dI~~L~ld~~~~~~~~~~l~~f~~~L~   77 (299)
T PF08643_consen    4 EVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAED----EKYVESED--RPDIRPLWLDDSDPSSIHASLSRFASLLS   77 (299)
T ss_pred             eEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHH----HHHHHhcc--CCCCCCcccCCCCCcchHHHHHHHHHHhc
Confidence            57999995 8999999999999999999998743322    22222222  13466666777554443333322     1


Q ss_pred             C--------CcEEEEcccc------cC-cCCCCcCh----HHHHHHHHHH----HHHHHHHHHHc--CCCEEEEEc-ccc
Q 022471          145 A--------FDAVMHFAAV------AY-VGESTLDP----LKYYHNITSN----TLVVLESMARH--GVDTLIYSS-TCA  198 (296)
Q Consensus       145 ~--------~D~vi~~Ag~------~~-~~~~~~~~----~~~~~~n~~~----t~~ll~~~~~~--~~~riV~~S-S~~  198 (296)
                      .        .-...+..|+      .. .++.+.-+    .+.++.|+..    +..+++.++.+  ...++|.+. |..
T Consensus        78 ~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~  157 (299)
T PF08643_consen   78 RPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSIS  157 (299)
T ss_pred             CCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchh
Confidence            1        1122344443      11 12222222    2334444444    56688888772  234555543 421


Q ss_pred             cccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeee
Q 022471          199 TYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVI  251 (296)
Q Consensus       199 ~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~  251 (296)
                      .           ....+..++-.....+.+.+.+.+.+|   ++++|+.++.|++.
T Consensus       158 s-----------sl~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~  202 (299)
T PF08643_consen  158 S-----------SLNPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLD  202 (299)
T ss_pred             h-----------ccCCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeec
Confidence            1           123344677788888888999988888   46999999999863

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.76  E-value=0.00011  Score=69.20  Aligned_cols=74  Identities=23%  Similarity=0.244  Sum_probs=53.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+|+|+|+++ +|.++++.|+++|++|++.++...  +...+.++++..  .++.++.+|..+.     ..  +++|+||
T Consensus         6 k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~--~~~~~~~~~l~~--~~~~~~~~~~~~~-----~~--~~~d~vv   73 (450)
T PRK14106          6 KKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEE--DQLKEALEELGE--LGIELVLGEYPEE-----FL--EGVDLVV   73 (450)
T ss_pred             CEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHHHHh--cCCEEEeCCcchh-----Hh--hcCCEEE
Confidence            8999999877 999999999999999999987532  122222222211  2466778888762     22  5789999


Q ss_pred             Eccccc
Q 022471          151 HFAAVA  156 (296)
Q Consensus       151 ~~Ag~~  156 (296)
                      +++|+.
T Consensus        74 ~~~g~~   79 (450)
T PRK14106         74 VSPGVP   79 (450)
T ss_pred             ECCCCC
Confidence            999864

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.74  E-value=6.3e-05  Score=58.92  Aligned_cols=75  Identities=20%  Similarity=0.197  Sum_probs=50.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCe-EEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +++++|.|+ ||.|+.++..|++.|++ |+++.|+..+.+++.+.   .  ....+.++  ++.+..   +.+  ...|+
T Consensus        12 ~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~---~--~~~~~~~~--~~~~~~---~~~--~~~Di   78 (135)
T PF01488_consen   12 GKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEE---F--GGVNIEAI--PLEDLE---EAL--QEADI   78 (135)
T ss_dssp             TSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHH---H--TGCSEEEE--EGGGHC---HHH--HTESE
T ss_pred             CCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHH---c--Ccccccee--eHHHHH---HHH--hhCCe
Confidence            489999997 99999999999999986 99998765444333333   2  11234433  333333   444  46899


Q ss_pred             EEEcccccC
Q 022471          149 VMHFAAVAY  157 (296)
Q Consensus       149 vi~~Ag~~~  157 (296)
                      ||++.+...
T Consensus        79 vI~aT~~~~   87 (135)
T PF01488_consen   79 VINATPSGM   87 (135)
T ss_dssp             EEE-SSTTS
T ss_pred             EEEecCCCC
Confidence            999987654

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.72  E-value=0.0005  Score=57.71  Aligned_cols=108  Identities=25%  Similarity=0.296  Sum_probs=67.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCC-------------------CcchhhhhhhhhCCCCCceEEEEcc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSR-------------------GNIGAVKVLQELFPEPGRLQFIYAD  130 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~D  130 (296)
                      ++|+|.| .|++|+++++.|+..|. +++++|...-                   +.+.+.+.+++..+. .++..+..+
T Consensus        22 ~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~-v~i~~~~~~   99 (202)
T TIGR02356        22 SHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSD-IQVTALKER   99 (202)
T ss_pred             CCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCC-CEEEEehhc
Confidence            7899999 69999999999999997 8999986521                   111223334444332 344445555


Q ss_pred             CCCHHHHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccccccc
Q 022471          131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYG  201 (296)
Q Consensus       131 l~d~~~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g  201 (296)
                      +. .+.+.+++  .+.|+||.+...         .        ..-..+-+.+++.+. .+|+.++.+.+|
T Consensus       100 i~-~~~~~~~~--~~~D~Vi~~~d~---------~--------~~r~~l~~~~~~~~i-p~i~~~~~g~~G  149 (202)
T TIGR02356       100 VT-AENLELLI--NNVDLVLDCTDN---------F--------ATRYLINDACVALGT-PLISAAVVGFGG  149 (202)
T ss_pred             CC-HHHHHHHH--hCCCEEEECCCC---------H--------HHHHHHHHHHHHcCC-CEEEEEeccCeE
Confidence            54 35666777  578999987631         1        112235566667664 577776654443

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=97.68  E-value=0.00033  Score=64.29  Aligned_cols=169  Identities=11%  Similarity=0.078  Sum_probs=100.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-e----EEE--E--ecCCCCcchhhhhhhhhC-CCCCceEEEEccCCCHHHHHHH
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-R----VTI--V--DNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKF  140 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~----V~~--~--~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~  140 (296)
                      -+|.|+||+|.+|++++-.|+..|. .    |.+  +  +++....+.....+.... +...++.+. .  .+.++    
T Consensus        45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~-~--~~y~~----  117 (387)
T TIGR01757        45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIG-I--DPYEV----  117 (387)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEe-c--CCHHH----
Confidence            5899999999999999999998864 2    333  3  655544443333333322 111122211 1  12222    


Q ss_pred             hhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcC-CC-EEEEEcccc---cccCCCCCCCCCCCCCC
Q 022471          141 FSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VD-TLIYSSTCA---TYGEPEKMPITEETPQA  215 (296)
Q Consensus       141 ~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~~-riV~~SS~~---~~g~~~~~~~~e~~~~~  215 (296)
                      +  .+.|+||-.||....+  ..+..+.++.|....+.+.+.+.+.. .. ++|.+|--.   .|-      ..+..+..
T Consensus       118 ~--kdaDIVVitAG~prkp--g~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNPvDv~t~v------~~k~sg~~  187 (387)
T TIGR01757       118 F--EDADWALLIGAKPRGP--GMERADLLDINGQIFADQGKALNAVASKNCKVLVVGNPCNTNALI------AMKNAPNI  187 (387)
T ss_pred             h--CCCCEEEECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCcHHHHHHH------HHHHcCCC
Confidence            2  5789999999975432  34667789999999999999999854 33 455555411   110      00001111


Q ss_pred             -CCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          216 -PINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       216 -~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                       ....=+.+.+-..++-..+++..++....|+-++|+|.+..
T Consensus       188 ~~rviG~gT~LDsaR~r~~LA~~l~v~~~~V~~~~V~GeHGd  229 (387)
T TIGR01757       188 PRKNFHALTRLDENRAKCQLALKSGKFYTSVSNVTIWGNHST  229 (387)
T ss_pred             cccEEEecchhHHHHHHHHHHHHHCcChhHcceeEEEecCCC
Confidence             11111333444445555666667888888888889998743

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.61  E-value=0.0015  Score=58.52  Aligned_cols=115  Identities=16%  Similarity=0.096  Sum_probs=77.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +||.|+|+ |.+|+.++..|+..|.  +++++|.+..........+....+-.........  .|.++    +  .+.|+
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~~----~--~~adi   74 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYSV----T--ANSKV   74 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHHH----h--CCCCE
Confidence            68999996 9999999999998875  7999997664444333334333211111122211  23332    2  57899


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcc
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS  196 (296)
                      ||-+||....+  ..+-.+.+..|....+.+.+.+.+.+.+ .+|.+|.
T Consensus        75 vvitaG~~~k~--g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN  121 (312)
T cd05293          75 VIVTAGARQNE--GESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSN  121 (312)
T ss_pred             EEECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEccC
Confidence            99999975432  2456678899999999999999998755 4454553

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.61  E-value=0.00052  Score=58.57  Aligned_cols=75  Identities=17%  Similarity=0.236  Sum_probs=57.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+++|.|+ |-+|+.+|+.|.++|++|+++++++....+.   +.    .....+.+.+|-+|.+.++++=- .+.|++|
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~---~~----~~~~~~~v~gd~t~~~~L~~agi-~~aD~vv   71 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEF---LA----DELDTHVVIGDATDEDVLEEAGI-DDADAVV   71 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHH---hh----hhcceEEEEecCCCHHHHHhcCC-CcCCEEE
Confidence            57888885 8999999999999999999998655332221   11    11457888999999999998722 5789999


Q ss_pred             Eccc
Q 022471          151 HFAA  154 (296)
Q Consensus       151 ~~Ag  154 (296)
                      -..+
T Consensus        72 a~t~   75 (225)
T COG0569          72 AATG   75 (225)
T ss_pred             EeeC
Confidence            7665

>PLN02602 lactate dehydrogenase

Probab=97.58  E-value=0.0023  Score=58.25  Aligned_cols=115  Identities=20%  Similarity=0.166  Sum_probs=77.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +||.|+|+ |.||+.++..|+..|.  +++++|.+..........+...........+.. + .|.++    +  .+.|+
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~-~-~dy~~----~--~daDi  108 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILA-S-TDYAV----T--AGSDL  108 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEe-C-CCHHH----h--CCCCE
Confidence            68999996 9999999999998875  799999866544444444433321111222221 1 12222    2  57899


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCE-EEEEcc
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT-LIYSST  196 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~r-iV~~SS  196 (296)
                      ||-+||....+  ..+..+.+..|....+.+.+.+.+.+.+- +|.+|-
T Consensus       109 VVitAG~~~k~--g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvtN  155 (350)
T PLN02602        109 CIVTAGARQIP--GESRLNLLQRNVALFRKIIPELAKYSPDTILLIVSN  155 (350)
T ss_pred             EEECCCCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            99999975432  23556788999999999999999887554 444553

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.57  E-value=0.0024  Score=49.85  Aligned_cols=108  Identities=24%  Similarity=0.394  Sum_probs=69.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCc-------------------chhhhhhhhhCCCCCceEEEEcc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGN-------------------IGAVKVLQELFPEPGRLQFIYAD  130 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~D  130 (296)
                      ++|+|.|+ |++|+++++.|+..|. +++++|...-..                   +.+.+.+.+..+. .++..+..+
T Consensus         3 ~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~-~~v~~~~~~   80 (135)
T PF00899_consen    3 KRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPD-VEVEAIPEK   80 (135)
T ss_dssp             -EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTT-SEEEEEESH
T ss_pred             CEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCc-eeeeeeecc
Confidence            68999995 9999999999999998 788887532111                   1122333444332 466777777


Q ss_pred             CCCHHHHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccccccc
Q 022471          131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYG  201 (296)
Q Consensus       131 l~d~~~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g  201 (296)
                      + +.+...+++  .++|+||.+...                 ......+.+.+++.+. .+|+.+....+|
T Consensus        81 ~-~~~~~~~~~--~~~d~vi~~~d~-----------------~~~~~~l~~~~~~~~~-p~i~~~~~g~~G  130 (135)
T PF00899_consen   81 I-DEENIEELL--KDYDIVIDCVDS-----------------LAARLLLNEICREYGI-PFIDAGVNGFYG  130 (135)
T ss_dssp             C-SHHHHHHHH--HTSSEEEEESSS-----------------HHHHHHHHHHHHHTT--EEEEEEEETTEE
T ss_pred             c-ccccccccc--cCCCEEEEecCC-----------------HHHHHHHHHHHHHcCC-CEEEEEeecCEE
Confidence            7 456677777  468999987531                 2223346667777764 788877755443

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=97.56  E-value=0.0019  Score=57.92  Aligned_cols=165  Identities=16%  Similarity=0.148  Sum_probs=93.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      |+|.|.|+ |.+|..++..|+.+|  .+|++++++..........+..............   .|.++    +  .+.|+
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~~~----l--~~aDi   70 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDYAD----C--KGADV   70 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCHHH----h--CCCCE
Confidence            47999997 999999999999999  5899999865443322222221111101122222   23322    3  57899


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccccc----ccCCCCCCCCCCCCCCCCChHHH-H
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCAT----YGEPEKMPITEETPQAPINPYGK-A  223 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~----~g~~~~~~~~e~~~~~~~~~Y~~-s  223 (296)
                      +|.+++.....  ..+..+....|....+.+.+.+.+.+.+-++.+-|.-+    |--      .+....++....|. +
T Consensus        71 Viita~~~~~~--~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~tNP~d~~~~~~------~~~sg~p~~~viG~gt  142 (308)
T cd05292          71 VVITAGANQKP--GETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVTNPVDVLTYVA------YKLSGLPPNRVIGSGT  142 (308)
T ss_pred             EEEccCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH------HHHHCcCHHHeecccc
Confidence            99999975432  23556678889999999999998876544444444110    000      00000111111111 1


Q ss_pred             HHHHHHHHHHhhhcCCCcEEEEecCeeecCC
Q 022471          224 KKMAEDIILDFSKNSDMAVMILRYFNVIGSD  254 (296)
Q Consensus       224 K~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~  254 (296)
                      -+-..++-..+++..+++...++ +.|+|.+
T Consensus       143 ~LDs~R~~~~la~~~~v~~~~v~-~~viGeH  172 (308)
T cd05292         143 VLDTARFRYLLGEHLGVDPRSVH-AYIIGEH  172 (308)
T ss_pred             hhhHHHHHHHHHHHhCCCcccee-ceeeccC
Confidence            11123344455555788877776 5688886

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.55  E-value=0.0016  Score=58.33  Aligned_cols=165  Identities=16%  Similarity=0.136  Sum_probs=94.7

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      ||.|+|++|.||++++..|+..+.  +++++|+++ . ......+...   ..........  +.+++.+.+  .+.|+|
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~-a-~g~a~DL~~~---~~~~~i~~~~--~~~~~~~~~--~daDiv   71 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG-A-AGVAADLSHI---PTAASVKGFS--GEEGLENAL--KGADVV   71 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC-C-cEEEchhhcC---CcCceEEEec--CCCchHHHc--CCCCEE
Confidence            589999999999999999998875  789999765 2 1111112111   1111111101  111223344  578999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEE-Ecccc-------cccCCCCCCCCCCCCCCCCChHH
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIY-SSTCA-------TYGEPEKMPITEETPQAPINPYG  221 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~-~SS~~-------~~g~~~~~~~~e~~~~~~~~~Y~  221 (296)
                      |-+||....+  ..+..+.+..|....+.+.+.+.+.+..-+|. +|--.       .|-      .......++....|
T Consensus        72 vitaG~~~~~--g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsNPvDv~~~i~t~~------~~~~sg~p~~rViG  143 (312)
T TIGR01772        72 VIPAGVPRKP--GMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITNPVNSTVPIAAEV------LKKKGVYDPNKLFG  143 (312)
T ss_pred             EEeCCCCCCC--CccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecCchhhHHHHHHHH------HHHhcCCChHHEEe
Confidence            9999975432  34566788999999999999999887655444 44311       010      00001111111111


Q ss_pred             HHHHHHHHHHHHhhhcCCCcEEEEecCeeecCC
Q 022471          222 KAKKMAEDIILDFSKNSDMAVMILRYFNVIGSD  254 (296)
Q Consensus       222 ~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~  254 (296)
                      .+-+-..++-..+++..+++...+ -++|+|.|
T Consensus       144 ~g~LDsaR~r~~la~~l~v~~~~v-~~~ViGeH  175 (312)
T TIGR01772       144 VTTLDIVRANTFVAELKGKDPMEV-NVPVIGGH  175 (312)
T ss_pred             eecchHHHHHHHHHHHhCCCHHHe-EEEEEEec
Confidence            111333445555666667766554 57788887

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.54  E-value=0.0033  Score=56.20  Aligned_cols=116  Identities=17%  Similarity=0.129  Sum_probs=73.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCC-CCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      |++|.|.|| |.+|+.++..++..|. +|+++|+++.........+..... ....... .. -+|.   +. +  .+.|
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i-~~-~~d~---~~-~--~~aD   72 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKI-TG-TNDY---ED-I--AGSD   72 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEE-Ee-CCCH---HH-H--CCCC
Confidence            579999998 9999999999999875 999999865543322221211111 1011111 11 1222   22 3  5789


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCE-EEEEcc
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT-LIYSST  196 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~r-iV~~SS  196 (296)
                      +||.++|.....  .....+....|....+.+++.+.+...+. +|++|-
T Consensus        73 iVii~~~~p~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~tN  120 (307)
T PRK06223         73 VVVITAGVPRKP--GMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVTN  120 (307)
T ss_pred             EEEECCCCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            999999875422  22445667788888888999888876554 555543

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.50  E-value=0.0061  Score=54.89  Aligned_cols=117  Identities=14%  Similarity=0.083  Sum_probs=74.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcch-hhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIG-AVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +||.|.| +|.+|+.++..++..|. +|+++|.++..... ..+........+....+..  -+|.+    .+  .+.|+
T Consensus         7 ~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~~----~l--~~aDi   77 (321)
T PTZ00082          7 RKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNYE----DI--AGSDV   77 (321)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCHH----Hh--CCCCE
Confidence            7899999 59999999999999995 89999987654321 1111111110111122221  12332    23  57899


Q ss_pred             EEEcccccCcCCC---CcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcc
Q 022471          149 VMHFAAVAYVGES---TLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (296)
Q Consensus       149 vi~~Ag~~~~~~~---~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS  196 (296)
                      ||.+||....+..   +.+..+.+..|+...+.+.+.+.+...+ .+|++|-
T Consensus        78 VI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sN  129 (321)
T PTZ00082         78 VIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITN  129 (321)
T ss_pred             EEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            9999997543221   1144567788988888999999888765 5666554

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.49  E-value=0.0017  Score=55.58  Aligned_cols=106  Identities=21%  Similarity=0.293  Sum_probs=65.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCC-------------------CcchhhhhhhhhCCCCCceEEEEcc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSR-------------------GNIGAVKVLQELFPEPGRLQFIYAD  130 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~D  130 (296)
                      ++|+|.| .||+|+++++.|+..|. +++++|...-                   +.+.+.+.+++..+. .++..+..+
T Consensus        22 ~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~-~~i~~~~~~   99 (228)
T cd00757          22 ARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPD-VEIEAYNER   99 (228)
T ss_pred             CcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCC-CEEEEecce
Confidence            7899999 69999999999999997 6777754321                   111222333333322 355666666


Q ss_pred             CCCHHHHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccccc
Q 022471          131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCAT  199 (296)
Q Consensus       131 l~d~~~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~  199 (296)
                      ++ .+.+.+++  .++|+||.+...         +        ..-..+-+.+.+.+. .+|+.+....
T Consensus       100 i~-~~~~~~~~--~~~DvVi~~~d~---------~--------~~r~~l~~~~~~~~i-p~i~~g~~g~  147 (228)
T cd00757         100 LD-AENAEELI--AGYDLVLDCTDN---------F--------ATRYLINDACVKLGK-PLVSGAVLGF  147 (228)
T ss_pred             eC-HHHHHHHH--hCCCEEEEcCCC---------H--------HHHHHHHHHHHHcCC-CEEEEEeccC
Confidence            63 45666777  568999988641         1        112235566666664 5666655443

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=97.46  E-value=0.0044  Score=55.32  Aligned_cols=113  Identities=17%  Similarity=0.164  Sum_probs=75.5

Q ss_pred             EEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           73 VLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        73 vlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |.|.|+ |++|..++..|+..|  .+++++|++..........+..............+  .|.   + .+  .+.|+||
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~---~-~l--~~aDiVI   71 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDY---A-DA--ADADIVV   71 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCH---H-Hh--CCCCEEE
Confidence            457886 789999999999998  68999998765555444444444322112222211  222   2 23  5789999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCE-EEEEcc
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT-LIYSST  196 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~r-iV~~SS  196 (296)
                      .+||....+  ..+..+.+..|+...+.+.+.+++.+.+- +|.+|.
T Consensus        72 itag~p~~~--~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~sN  116 (300)
T cd00300          72 ITAGAPRKP--GETRLDLINRNAPILRSVITNLKKYGPDAIILVVSN  116 (300)
T ss_pred             EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence            999975432  23556788899999999999999887554 444443

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.42  E-value=0.002  Score=59.33  Aligned_cols=105  Identities=23%  Similarity=0.289  Sum_probs=65.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCC-------------------CCcchhhhhhhhhCCCCCceEEEEcc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS-------------------RGNIGAVKVLQELFPEPGRLQFIYAD  130 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~D  130 (296)
                      ++|+|.|+ ||+|++++..|+..|. +++++|+..                   .+.+.+.+.+.+..+. .++..+...
T Consensus       136 ~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~-v~v~~~~~~  213 (376)
T PRK08762        136 ARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPD-VQVEAVQER  213 (376)
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCC-CEEEEEecc
Confidence            78999975 9999999999999998 788888751                   1222233344444332 344455555


Q ss_pred             CCCHHHHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccc
Q 022471          131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCA  198 (296)
Q Consensus       131 l~d~~~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~  198 (296)
                      +.+ +.+.+++  .++|+||++...         ..        .-..+-+++.+.+. .+|+.+...
T Consensus       214 ~~~-~~~~~~~--~~~D~Vv~~~d~---------~~--------~r~~ln~~~~~~~i-p~i~~~~~g  260 (376)
T PRK08762        214 VTS-DNVEALL--QDVDVVVDGADN---------FP--------TRYLLNDACVKLGK-PLVYGAVFR  260 (376)
T ss_pred             CCh-HHHHHHH--hCCCEEEECCCC---------HH--------HHHHHHHHHHHcCC-CEEEEEecc
Confidence            543 4566666  468999988641         11        11124466677664 567765533

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.42  E-value=0.0021  Score=57.88  Aligned_cols=115  Identities=18%  Similarity=0.163  Sum_probs=74.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCcchhhhhhhhhCC-CCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      ++|.|+|| |.+|+.++..++..| .+++++|++..........+..... .+.... +.+ -+|   .+ .+  .+.|+
T Consensus         6 ~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~-i~~-~~d---~~-~l--~~ADi   76 (319)
T PTZ00117          6 KKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNIN-ILG-TNN---YE-DI--KDSDV   76 (319)
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeE-EEe-CCC---HH-Hh--CCCCE
Confidence            78999997 999999999999998 6899999865443321111111110 001111 111 123   33 33  57899


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCE-EEEEcc
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT-LIYSST  196 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~r-iV~~SS  196 (296)
                      ||.+||.....  .....+.+..|....+.+.+.+.+...+. +|++|.
T Consensus        77 VVitag~~~~~--g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN  123 (319)
T PTZ00117         77 VVITAGVQRKE--EMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTN  123 (319)
T ss_pred             EEECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            99999875432  23456678888888889999998887655 555554

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=97.42  E-value=0.0027  Score=56.74  Aligned_cols=115  Identities=13%  Similarity=0.151  Sum_probs=71.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchh-hhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGA-VKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      |+|.|.|+ |.+|..+|..|+..|+ +|+++|......... .+..+........     ..++-..++++ +  .+.|+
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~-----~~i~~t~d~~~-~--~~aDi   72 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFD-----TKVTGTNNYAD-T--ANSDI   72 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCC-----cEEEecCCHHH-h--CCCCE
Confidence            67999996 9999999999999886 899999754322211 1111110000001     11111112223 2  46899


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcc
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS  196 (296)
                      ||-+||....+  .....+.+..|....+.+++.+.+.... .+|.+|.
T Consensus        73 VIitag~p~~~--~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN  119 (305)
T TIGR01763        73 VVITAGLPRKP--GMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN  119 (305)
T ss_pred             EEEcCCCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            99999975432  2345567888999999999998887644 4555554

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.42  E-value=0.0032  Score=49.62  Aligned_cols=104  Identities=20%  Similarity=0.291  Sum_probs=64.6

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCC-------------------cchhhhhhhhhCCCCCceEEEEccC
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRG-------------------NIGAVKVLQELFPEPGRLQFIYADL  131 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~Dl  131 (296)
                      +|+|.|+ |++|+++++.|+..|. +++++|...-.                   .+.+.+.+++..+. .++..+..++
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~-v~i~~~~~~~   78 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPG-VNVTAVPEGI   78 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCC-cEEEEEeeec
Confidence            4889996 9999999999999998 68888754211                   11122333333322 3455555565


Q ss_pred             CCHHHHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccc
Q 022471          132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCA  198 (296)
Q Consensus       132 ~d~~~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~  198 (296)
                      .+.. ..+.+  .++|+||.+...                 ......+.+++++.+. .+|..++..
T Consensus        79 ~~~~-~~~~~--~~~diVi~~~d~-----------------~~~~~~l~~~~~~~~i-~~i~~~~~g  124 (143)
T cd01483          79 SEDN-LDDFL--DGVDLVIDAIDN-----------------IAVRRALNRACKELGI-PVIDAGGLG  124 (143)
T ss_pred             Chhh-HHHHh--cCCCEEEECCCC-----------------HHHHHHHHHHHHHcCC-CEEEEcCCC
Confidence            5433 24445  578999987641                 2233446677777764 577766654

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.42  E-value=0.0043  Score=47.48  Aligned_cols=98  Identities=15%  Similarity=0.184  Sum_probs=56.3

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCC-CeEEE-EecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDS-YRVTI-VDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G-~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +|.|.||||.+|.++++.|++.- .+++. +++................ ....+.+..   .+.+.+      .++|+|
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~---~~~~~~------~~~Dvv   70 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPK-GFEDLSVED---ADPEEL------SDVDVV   70 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGT-TTEEEBEEE---TSGHHH------TTESEE
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccc-cccceeEee---cchhHh------hcCCEE
Confidence            68999999999999999999964 35554 4443313222222221110 001222222   333333      478999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccc
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCA  198 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~  198 (296)
                      |.|.+.                  ..+..+.+.+.+.|. ++|=.|+..
T Consensus        71 f~a~~~------------------~~~~~~~~~~~~~g~-~ViD~s~~~  100 (121)
T PF01118_consen   71 FLALPH------------------GASKELAPKLLKAGI-KVIDLSGDF  100 (121)
T ss_dssp             EE-SCH------------------HHHHHHHHHHHHTTS-EEEESSSTT
T ss_pred             EecCch------------------hHHHHHHHHHhhCCc-EEEeCCHHH
Confidence            998752                  234557777777776 676666643

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.41  E-value=0.0015  Score=61.57  Aligned_cols=76  Identities=25%  Similarity=0.253  Sum_probs=49.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +|+|+|||+++ +|.++++.|++.|++|++.++.........+.+++     ..+.+..++  +..++   +. .++|+|
T Consensus         5 ~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~-----~g~~~~~~~--~~~~~---~~-~~~d~v   72 (447)
T PRK02472          5 NKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLE-----EGIKVICGS--HPLEL---LD-EDFDLM   72 (447)
T ss_pred             CCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHh-----cCCEEEeCC--CCHHH---hc-CcCCEE
Confidence            38999999976 99999999999999999998654332222222322     123333322  11222   21 248999


Q ss_pred             EEcccccC
Q 022471          150 MHFAAVAY  157 (296)
Q Consensus       150 i~~Ag~~~  157 (296)
                      |+++|+..
T Consensus        73 V~s~gi~~   80 (447)
T PRK02472         73 VKNPGIPY   80 (447)
T ss_pred             EECCCCCC
Confidence            99999764

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.41  E-value=0.0025  Score=53.91  Aligned_cols=108  Identities=21%  Similarity=0.340  Sum_probs=66.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCC---CC---------------cchhhhhhhhhCCCCCceEEEEccC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS---RG---------------NIGAVKVLQELFPEPGRLQFIYADL  131 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~---~~---------------~~~~~~~~~~~~~~~~~~~~~~~Dl  131 (296)
                      .+|+|.|+ ||+|+++++.|++.|. +++++|.+.   .+               .+.+.+.+.++.+. .+++.+...+
T Consensus        29 ~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~-v~v~~~~~~i  106 (212)
T PRK08644         29 AKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPF-VEIEAHNEKI  106 (212)
T ss_pred             CCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCC-CEEEEEeeec
Confidence            78999995 9999999999999998 588888652   11               11122233333332 4555555566


Q ss_pred             CCHHHHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccccccc
Q 022471          132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATYG  201 (296)
Q Consensus       132 ~d~~~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-~~~riV~~SS~~~~g  201 (296)
                      ++ +.+.+++  .++|+||.+.-         +        ...-..+.+.+.+. + ..+|+.+....|+
T Consensus       107 ~~-~~~~~~~--~~~DvVI~a~D---------~--------~~~r~~l~~~~~~~~~-~p~I~~~~~~~~~  156 (212)
T PRK08644        107 DE-DNIEELF--KDCDIVVEAFD---------N--------AETKAMLVETVLEHPG-KKLVAASGMAGYG  156 (212)
T ss_pred             CH-HHHHHHH--cCCCEEEECCC---------C--------HHHHHHHHHHHHHhCC-CCEEEeehhhccC
Confidence            54 4556666  56899998742         1        11223355666665 5 4677766554443

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=97.39  E-value=0.0031  Score=56.23  Aligned_cols=162  Identities=16%  Similarity=0.162  Sum_probs=94.9

Q ss_pred             EEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCC-CCCceEEEEccCCCHHHHHHHhhcCCCcEEEE
Q 022471           75 VTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFDAVMH  151 (296)
Q Consensus        75 VTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi~  151 (296)
                      |.| .|.||..++..|+..+.  +++++|++..........+..... ....+... .  .+.++    +  .+.|+||-
T Consensus         1 iIG-aG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~-~--~~~~~----~--~daDivVi   70 (299)
T TIGR01771         1 IIG-AGNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR-S--GDYSD----C--KDADLVVI   70 (299)
T ss_pred             CCC-cCHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe-c--CCHHH----H--CCCCEEEE
Confidence            345 59999999999998875  799999866544444444433221 11222222 1  23332    3  57899999


Q ss_pred             cccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcccc---cccCCCCCCCCCCCCCCCCChHHH-HHHH
Q 022471          152 FAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSSTCA---TYGEPEKMPITEETPQAPINPYGK-AKKM  226 (296)
Q Consensus       152 ~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS~~---~~g~~~~~~~~e~~~~~~~~~Y~~-sK~~  226 (296)
                      .||....+  ..+..+.++.|....+.+.+.+.+.+.. .++.+|.-.   .|--      ......++....+. +-.-
T Consensus        71 tag~~rk~--g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP~d~~t~~~------~~~sg~p~~~viG~gt~LD  142 (299)
T TIGR01771        71 TAGAPQKP--GETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATNPVDILTYVA------WKLSGFPKNRVIGSGTVLD  142 (299)
T ss_pred             CCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH------HHHhCCCHHHEEeccchHH
Confidence            99975432  2356678999999999999999988755 445555311   1100      00001111111222 2222


Q ss_pred             HHHHHHHhhhcCCCcEEEEecCeeecCCC
Q 022471          227 AEDIILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       227 ~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                      ..++-..+++..++....++. .|+|.+.
T Consensus       143 s~R~~~~la~~l~v~~~~V~~-~v~GeHG  170 (299)
T TIGR01771       143 TARLRYLLAEKLGVDPQSVHA-YIIGEHG  170 (299)
T ss_pred             HHHHHHHHHHHhCcCcCeEEE-EEEecCC
Confidence            344555556667787777774 5899873

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.39  E-value=0.0014  Score=57.99  Aligned_cols=74  Identities=18%  Similarity=0.223  Sum_probs=49.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHH---HHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK---AVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~v~~~~~~~~~D  147 (296)
                      ++++|+|++|++|..+++.+...|.+|++++++....    +.+.+.   +  +.. ..|..+.+   .+.+.....++|
T Consensus       146 ~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~----~~~~~~---g--~~~-~~~~~~~~~~~~~~~~~~~~~~d  215 (325)
T cd08253         146 ETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGA----ELVRQA---G--ADA-VFNYRAEDLADRILAATAGQGVD  215 (325)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHHc---C--CCE-EEeCCCcCHHHHHHHHcCCCceE
Confidence            7999999999999999999999999999987644322    222222   1  111 13334333   333443335799


Q ss_pred             EEEEccc
Q 022471          148 AVMHFAA  154 (296)
Q Consensus       148 ~vi~~Ag  154 (296)
                      .+++++|
T Consensus       216 ~vi~~~~  222 (325)
T cd08253         216 VIIEVLA  222 (325)
T ss_pred             EEEECCc
Confidence            9999986

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.38  E-value=0.00099  Score=61.30  Aligned_cols=102  Identities=19%  Similarity=0.250  Sum_probs=64.6

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHH-hhcCCC
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF-FSENAF  146 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~-~~~~~~  146 (296)
                      .+++|.|.||||.+|.++++.|.++ +.+|..+.+.....+...+.         .......|+.+.++++.. +  .++
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~---------~~~l~~~~~~~~~~~~~~~~--~~~  105 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSV---------FPHLITQDLPNLVAVKDADF--SDV  105 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhh---------CccccCccccceecCCHHHh--cCC
Confidence            3479999999999999999999998 67888887643222211111         011122344333333322 3  468


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccccccc
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYG  201 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g  201 (296)
                      |+||-+.+.                  ..+..+++.+ +.+ .+||-.|+..-+.
T Consensus       106 DvVf~Alp~------------------~~s~~i~~~~-~~g-~~VIDlSs~fRl~  140 (381)
T PLN02968        106 DAVFCCLPH------------------GTTQEIIKAL-PKD-LKIVDLSADFRLR  140 (381)
T ss_pred             CEEEEcCCH------------------HHHHHHHHHH-hCC-CEEEEcCchhccC
Confidence            999987752                  1456677776 444 5899999976553

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.37  E-value=0.0046  Score=53.48  Aligned_cols=104  Identities=19%  Similarity=0.188  Sum_probs=64.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCc-------------------chhhhhhhhhCCCCCceEEEEcc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGN-------------------IGAVKVLQELFPEPGRLQFIYAD  130 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~D  130 (296)
                      ++|+|.|+ ||+|+++++.|+..|. +++++|...-..                   +.+.+.+.++.+. .+++.+...
T Consensus        33 ~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~-v~i~~~~~~  110 (245)
T PRK05690         33 ARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPH-IAIETINAR  110 (245)
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCC-CEEEEEecc
Confidence            79999997 9999999999999997 778876532111                   1112333444332 455666666


Q ss_pred             CCCHHHHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccc
Q 022471          131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTC  197 (296)
Q Consensus       131 l~d~~~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~  197 (296)
                      ++ .+.+.+++  .++|+||.+..         +.        ..-..+-+++.+.+. .+|+.++.
T Consensus       111 i~-~~~~~~~~--~~~DiVi~~~D---------~~--------~~r~~ln~~~~~~~i-p~v~~~~~  156 (245)
T PRK05690        111 LD-DDELAALI--AGHDLVLDCTD---------NV--------ATRNQLNRACFAAKK-PLVSGAAI  156 (245)
T ss_pred             CC-HHHHHHHH--hcCCEEEecCC---------CH--------HHHHHHHHHHHHhCC-EEEEeeec
Confidence            54 34566666  57899998763         11        112235566666664 56665543

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.37  E-value=0.002  Score=58.39  Aligned_cols=94  Identities=16%  Similarity=0.152  Sum_probs=58.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCe---EEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYR---VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (296)
                      |++|+|.||||++|.++++.|.++||.   +..+.+.....+...     .    ........|+.+.     .+  .++
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~-----~----~g~~i~v~d~~~~-----~~--~~v   64 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELS-----F----KGKELKVEDLTTF-----DF--SGV   64 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeee-----e----CCceeEEeeCCHH-----HH--cCC
Confidence            478999999999999999999998874   466654432222111     1    1123333455432     22  368


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccc
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCA  198 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~  198 (296)
                      |+||-++|..                  .+..+++.+.+.|. +||=.||..
T Consensus        65 DvVf~A~g~g------------------~s~~~~~~~~~~G~-~VIDlS~~~   97 (334)
T PRK14874         65 DIALFSAGGS------------------VSKKYAPKAAAAGA-VVIDNSSAF   97 (334)
T ss_pred             CEEEECCChH------------------HHHHHHHHHHhCCC-EEEECCchh
Confidence            9999887632                  23446666666664 566566643

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.36  E-value=0.00045  Score=55.08  Aligned_cols=73  Identities=18%  Similarity=0.178  Sum_probs=48.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      ++++|+|+ |++|..+++.|++.| ++|++++|+..+.++..+.+..      .  .+..+..+.++   ++  .+.|+|
T Consensus        20 ~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~------~--~~~~~~~~~~~---~~--~~~Dvv   85 (155)
T cd01065          20 KKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGE------L--GIAIAYLDLEE---LL--AEADLI   85 (155)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhh------c--ccceeecchhh---cc--ccCCEE
Confidence            78999997 999999999999996 7899998765433332222111      0  01233344333   24  578999


Q ss_pred             EEcccccC
Q 022471          150 MHFAAVAY  157 (296)
Q Consensus       150 i~~Ag~~~  157 (296)
                      |++.....
T Consensus        86 i~~~~~~~   93 (155)
T cd01065          86 INTTPVGM   93 (155)
T ss_pred             EeCcCCCC
Confidence            99987543

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.35  E-value=0.00053  Score=60.49  Aligned_cols=74  Identities=22%  Similarity=0.347  Sum_probs=48.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +++|+|+|+ ||+|++++.+|++.| .+|++++|+..+.+++.+.+...    ..+.+   ++    +..+.+  ...|+
T Consensus       123 ~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~----~~~~~---~~----~~~~~~--~~~Di  188 (278)
T PRK00258        123 GKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGAL----GKAEL---DL----ELQEEL--ADFDL  188 (278)
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhc----cceee---cc----cchhcc--ccCCE
Confidence            389999997 999999999999999 79999998654443333332211    11111   11    112333  46899


Q ss_pred             EEEcccccC
Q 022471          149 VMHFAAVAY  157 (296)
Q Consensus       149 vi~~Ag~~~  157 (296)
                      |||+.....
T Consensus       189 vInaTp~g~  197 (278)
T PRK00258        189 IINATSAGM  197 (278)
T ss_pred             EEECCcCCC
Confidence            999987643

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=97.34  E-value=0.0032  Score=51.53  Aligned_cols=77  Identities=21%  Similarity=0.281  Sum_probs=50.5

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCC---C---------------cchhhhhhhhhCCCCCceEEEEccCC
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSR---G---------------NIGAVKVLQELFPEPGRLQFIYADLG  132 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~---~---------------~~~~~~~~~~~~~~~~~~~~~~~Dl~  132 (296)
                      +|+|.|+ |++|+++++.|++.|. +++++|...-   +               .+.+.+.++++.+. .++..+...+.
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~-v~i~~~~~~~~   78 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPF-VKIEAINIKID   78 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCC-CEEEEEEeecC
Confidence            4889985 9999999999999998 5999986541   1               11122233333332 34555555554


Q ss_pred             CHHHHHHHhhcCCCcEEEEcc
Q 022471          133 DAKAVNKFFSENAFDAVMHFA  153 (296)
Q Consensus       133 d~~~v~~~~~~~~~D~vi~~A  153 (296)
                      . +.+.+++  .++|+||.+.
T Consensus        79 ~-~~~~~~l--~~~DlVi~~~   96 (174)
T cd01487          79 E-NNLEGLF--GDCDIVVEAF   96 (174)
T ss_pred             h-hhHHHHh--cCCCEEEECC
Confidence            4 4566677  5789999874

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK08328 hypothetical protein; Provisional

Probab=97.34  E-value=0.0035  Score=53.73  Aligned_cols=108  Identities=18%  Similarity=0.289  Sum_probs=63.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcch--------------------hhhhhhhhCCCCCceEEEEc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIG--------------------AVKVLQELFPEPGRLQFIYA  129 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~  129 (296)
                      .+|+|.|+ ||+|+++++.|+..|. +++++|...-+...                    +.+.+++..+. .+++.+..
T Consensus        28 ~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~-v~v~~~~~  105 (231)
T PRK08328         28 AKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSD-IKIETFVG  105 (231)
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCC-CEEEEEec
Confidence            78999995 8999999999999997 68888743211100                    01112222222 34455555


Q ss_pred             cCCCHHHHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccccccc
Q 022471          130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYG  201 (296)
Q Consensus       130 Dl~d~~~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g  201 (296)
                      .+ +.+.+.+++  .+.|+||.+...                 ...-..+-+++++.+. .+|+.++.+.+|
T Consensus       106 ~~-~~~~~~~~l--~~~D~Vid~~d~-----------------~~~r~~l~~~~~~~~i-p~i~g~~~g~~G  156 (231)
T PRK08328        106 RL-SEENIDEVL--KGVDVIVDCLDN-----------------FETRYLLDDYAHKKGI-PLVHGAVEGTYG  156 (231)
T ss_pred             cC-CHHHHHHHH--hcCCEEEECCCC-----------------HHHHHHHHHHHHHcCC-CEEEEeeccCEE
Confidence            55 344566666  467888876531                 1111224456667664 677777766555

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.34  E-value=0.00074  Score=59.32  Aligned_cols=72  Identities=22%  Similarity=0.273  Sum_probs=47.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      ++++|+|+ |++|++++..|++.|++|++++|+..+.++..+.+..   . ........|     +  ...  .+.|+||
T Consensus       118 k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~---~-~~~~~~~~~-----~--~~~--~~~DivI  183 (270)
T TIGR00507       118 QRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQR---Y-GEIQAFSMD-----E--LPL--HRVDLII  183 (270)
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhh---c-CceEEechh-----h--hcc--cCccEEE
Confidence            78999998 7999999999999999999998765443333333221   1 112222111     1  112  4689999


Q ss_pred             Eccccc
Q 022471          151 HFAAVA  156 (296)
Q Consensus       151 ~~Ag~~  156 (296)
                      |+.+..
T Consensus       184 natp~g  189 (270)
T TIGR00507       184 NATSAG  189 (270)
T ss_pred             ECCCCC
Confidence            999864

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.33  E-value=0.0029  Score=57.85  Aligned_cols=106  Identities=20%  Similarity=0.210  Sum_probs=66.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCC-------------------CcchhhhhhhhhCCCCCceEEEEcc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSR-------------------GNIGAVKVLQELFPEPGRLQFIYAD  130 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~D  130 (296)
                      .+|+|.|+ ||+|+++++.|+..|. +++++|...-                   +.+.+.+.++++.+. .+++.+..+
T Consensus        29 ~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~-v~v~~~~~~  106 (355)
T PRK05597         29 AKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPD-VKVTVSVRR  106 (355)
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCC-cEEEEEEee
Confidence            78999996 9999999999999997 7888875431                   112223344444333 456666666


Q ss_pred             CCCHHHHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccccc
Q 022471          131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCAT  199 (296)
Q Consensus       131 l~d~~~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~  199 (296)
                      ++. +...+++  .++|+||.+..         +        ...-..+-+++.+.+. .+|+.++.+.
T Consensus       107 i~~-~~~~~~~--~~~DvVvd~~d---------~--------~~~r~~~n~~c~~~~i-p~v~~~~~g~  154 (355)
T PRK05597        107 LTW-SNALDEL--RDADVILDGSD---------N--------FDTRHLASWAAARLGI-PHVWASILGF  154 (355)
T ss_pred             cCH-HHHHHHH--hCCCEEEECCC---------C--------HHHHHHHHHHHHHcCC-CEEEEEEecC
Confidence            654 4555566  56899998863         1        1111224456666664 5776655433

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.32  E-value=0.00026  Score=62.49  Aligned_cols=76  Identities=16%  Similarity=0.177  Sum_probs=57.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      ..++|-||+|+.|.-++++|+.+|.+-.+.+|+..+...+...+.      .+..  ..++-+++.+++.+  .+.++|+
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG------~~~~--~~p~~~p~~~~~~~--~~~~VVl   76 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLG------PEAA--VFPLGVPAALEAMA--SRTQVVL   76 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcC------cccc--ccCCCCHHHHHHHH--hcceEEE
Confidence            579999999999999999999999998888877655544443332      2233  33444488888888  6799999


Q ss_pred             Eccccc
Q 022471          151 HFAAVA  156 (296)
Q Consensus       151 ~~Ag~~  156 (296)
                      ||+|..
T Consensus        77 ncvGPy   82 (382)
T COG3268          77 NCVGPY   82 (382)
T ss_pred             eccccc
Confidence            999964

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.31  E-value=0.0011  Score=67.77  Aligned_cols=77  Identities=18%  Similarity=0.270  Sum_probs=56.8

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhC-CCe-------------EEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKD-SYR-------------VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA  134 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~-G~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~  134 (296)
                      .+|+|+|.|+ |.||+..++.|++. +++             |++++++....+++.   +..    .++..++.|++|.
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la---~~~----~~~~~v~lDv~D~  639 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETV---EGI----ENAEAVQLDVSDS  639 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHH---Hhc----CCCceEEeecCCH
Confidence            4689999996 99999999999875 333             777775443322221   111    3567889999999


Q ss_pred             HHHHHHhhcCCCcEEEEcccc
Q 022471          135 KAVNKFFSENAFDAVMHFAAV  155 (296)
Q Consensus       135 ~~v~~~~~~~~~D~vi~~Ag~  155 (296)
                      +++.+++  .++|+||++...
T Consensus       640 e~L~~~v--~~~DaVIsalP~  658 (1042)
T PLN02819        640 ESLLKYV--SQVDVVISLLPA  658 (1042)
T ss_pred             HHHHHhh--cCCCEEEECCCc
Confidence            9999988  459999999864

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.30  E-value=0.0023  Score=57.51  Aligned_cols=76  Identities=16%  Similarity=0.094  Sum_probs=46.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEc-cCCCHHHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA-DLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      .+|+|+||+|++|..+++.+...|++|++++++..+.    +.++++   +.. ..+.. +-.+.....+.....++|++
T Consensus       140 ~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~----~~~~~l---Ga~-~vi~~~~~~~~~~~~~~~~~~gvdvv  211 (325)
T TIGR02825       140 ETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKV----AYLKKL---GFD-VAFNYKTVKSLEETLKKASPDGYDCY  211 (325)
T ss_pred             CEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHHc---CCC-EEEeccccccHHHHHHHhCCCCeEEE
Confidence            7999999999999999988888899999887543322    222332   111 11111 11122222222222469999


Q ss_pred             EEccc
Q 022471          150 MHFAA  154 (296)
Q Consensus       150 i~~Ag  154 (296)
                      +.+.|
T Consensus       212 ~d~~G  216 (325)
T TIGR02825       212 FDNVG  216 (325)
T ss_pred             EECCC
Confidence            99886

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.29  E-value=0.00074  Score=63.67  Aligned_cols=73  Identities=15%  Similarity=0.216  Sum_probs=56.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHH-hhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF-FSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~-~~~~~~D~v  149 (296)
                      |+|+|.|+ |.+|.++++.|.+.|++|+++++++...+    .+++    ...+.++.+|.++.+.++++ +  .+.|.|
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~----~~~~----~~~~~~~~gd~~~~~~l~~~~~--~~a~~v   69 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLR----RLQD----RLDVRTVVGNGSSPDVLREAGA--EDADLL   69 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHH----HHHh----hcCEEEEEeCCCCHHHHHHcCC--CcCCEE
Confidence            57999997 99999999999999999999987543322    2211    13577888999999988887 5  568888


Q ss_pred             EEccc
Q 022471          150 MHFAA  154 (296)
Q Consensus       150 i~~Ag  154 (296)
                      |-+..
T Consensus        70 i~~~~   74 (453)
T PRK09496         70 IAVTD   74 (453)
T ss_pred             EEecC
Confidence            87653

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.25  E-value=0.0029  Score=56.61  Aligned_cols=99  Identities=20%  Similarity=0.140  Sum_probs=62.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHH---hhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF---FSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~---~~~~~~D  147 (296)
                      ++++|+|+++++|.++++.+...|++|++++++..+.    +.+...   +..   ...|..+.+..+.+   ....++|
T Consensus       168 ~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~----~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~d  237 (342)
T cd08266         168 ETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKL----ERAKEL---GAD---YVIDYRKEDFVREVRELTGKRGVD  237 (342)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHHc---CCC---eEEecCChHHHHHHHHHhCCCCCc
Confidence            7899999999999999999999999999887644322    222221   111   12355554433333   3235799


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccccc
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCAT  199 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~  199 (296)
                      ++++++|..           .       ....++.+++.  +++|.+++...
T Consensus       238 ~~i~~~g~~-----------~-------~~~~~~~l~~~--G~~v~~~~~~~  269 (342)
T cd08266         238 VVVEHVGAA-----------T-------WEKSLKSLARG--GRLVTCGATTG  269 (342)
T ss_pred             EEEECCcHH-----------H-------HHHHHHHhhcC--CEEEEEecCCC
Confidence            999998731           0       12234444433  68999887543

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.24  E-value=0.0064  Score=50.81  Aligned_cols=109  Identities=24%  Similarity=0.365  Sum_probs=67.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCc---------------------chhhhhhhhhCCCCCceEEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGN---------------------IGAVKVLQELFPEPGRLQFIY  128 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~  128 (296)
                      .+|+|.|+ ||+|.++++.|+..|. +++++|...-..                     +.+.+.++++.+. .+++.+.
T Consensus        20 s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~-v~i~~~~   97 (198)
T cd01485          20 AKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPN-VKLSIVE   97 (198)
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCC-CEEEEEe
Confidence            78999986 5599999999999997 588887542110                     0112334444333 4556565


Q ss_pred             ccCCC-HHHHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccccccc
Q 022471          129 ADLGD-AKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYG  201 (296)
Q Consensus       129 ~Dl~d-~~~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g  201 (296)
                      .++.+ .+...+++  .++|+||.+-.         +        ......+-+.+++.+. .+|+.++.+.+|
T Consensus        98 ~~~~~~~~~~~~~~--~~~dvVi~~~d---------~--------~~~~~~ln~~c~~~~i-p~i~~~~~G~~G  151 (198)
T cd01485          98 EDSLSNDSNIEEYL--QKFTLVIATEE---------N--------YERTAKVNDVCRKHHI-PFISCATYGLIG  151 (198)
T ss_pred             cccccchhhHHHHH--hCCCEEEECCC---------C--------HHHHHHHHHHHHHcCC-CEEEEEeecCEE
Confidence            56642 34455666  46899886632         1        1122335566777765 688887766665

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=97.23  E-value=0.007  Score=52.19  Aligned_cols=107  Identities=18%  Similarity=0.172  Sum_probs=63.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCc-------------------chhhhhhhhhCCCCCceEEEEcc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGN-------------------IGAVKVLQELFPEPGRLQFIYAD  130 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~D  130 (296)
                      .+|+|.|+ ||+|+++++.|+..|. +++++|...-..                   +.+.+.+.++.+. .++..+...
T Consensus        25 ~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~-v~i~~~~~~  102 (240)
T TIGR02355        25 SRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPH-IAINPINAK  102 (240)
T ss_pred             CcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCC-cEEEEEecc
Confidence            78999985 9999999999999996 777877543221                   1112333333332 344444444


Q ss_pred             CCCHHHHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccc
Q 022471          131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATY  200 (296)
Q Consensus       131 l~d~~~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~  200 (296)
                      ++ .+.+.+++  .+.|+||.+..         +        ...-..+-+++.+.+. .+|+.++...+
T Consensus       103 i~-~~~~~~~~--~~~DlVvd~~D---------~--------~~~r~~ln~~~~~~~i-p~v~~~~~g~~  151 (240)
T TIGR02355       103 LD-DAELAALI--AEHDIVVDCTD---------N--------VEVRNQLNRQCFAAKV-PLVSGAAIRME  151 (240)
T ss_pred             CC-HHHHHHHh--hcCCEEEEcCC---------C--------HHHHHHHHHHHHHcCC-CEEEEEecccE
Confidence            43 34566666  56888887763         1        1112334566667664 56665554333

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=97.20  E-value=0.0024  Score=60.14  Aligned_cols=77  Identities=22%  Similarity=0.197  Sum_probs=54.9

Q ss_pred             ccEEEEEcC----------------CChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC
Q 022471           70 VTHVLVTGG----------------AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD  133 (296)
Q Consensus        70 ~k~vlVTGa----------------sG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d  133 (296)
                      +|+||||+|                ||-.|.+||+++..+|++|+++.-.. ...           .+..+.++  ++..
T Consensus       256 gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~-~~~-----------~p~~v~~i--~V~t  321 (475)
T PRK13982        256 GRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPV-DLA-----------DPQGVKVI--HVES  321 (475)
T ss_pred             CCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCc-CCC-----------CCCCceEE--EecC
Confidence            499999987                78999999999999999999986321 110           12345544  4556


Q ss_pred             HHHHHHHhhc-CCCcEEEEcccccCcCC
Q 022471          134 AKAVNKFFSE-NAFDAVMHFAAVAYVGE  160 (296)
Q Consensus       134 ~~~v~~~~~~-~~~D~vi~~Ag~~~~~~  160 (296)
                      .+++.+++.+ ...|++|++|++....+
T Consensus       322 a~eM~~av~~~~~~Di~I~aAAVaDyrp  349 (475)
T PRK13982        322 ARQMLAAVEAALPADIAIFAAAVADWRV  349 (475)
T ss_pred             HHHHHHHHHhhCCCCEEEEeccccceee
Confidence            6666665543 34799999999876543

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.19  E-value=0.00078  Score=60.35  Aligned_cols=36  Identities=25%  Similarity=0.314  Sum_probs=31.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN  107 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~  107 (296)
                      ++|.|+| .|.+|..++..|+++|++|+++++++...
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~   38 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAA   38 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHH
Confidence            6899999 79999999999999999999999875433

>PRK06849 hypothetical protein; Provisional

Probab=97.17  E-value=0.0021  Score=59.48  Aligned_cols=78  Identities=15%  Similarity=0.106  Sum_probs=50.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH----HHHHHHhhcCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA----KAVNKFFSENA  145 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~----~~v~~~~~~~~  145 (296)
                      +|+|||||++..+|..+++.|.+.|++|++++..+.......+.+       .....+...-.|.    +.+.+++++.+
T Consensus         4 ~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~-------d~~~~~p~p~~d~~~~~~~L~~i~~~~~   76 (389)
T PRK06849          4 KKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV-------DGFYTIPSPRWDPDAYIQALLSIVQREN   76 (389)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh-------hheEEeCCCCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999986532211111111       1122221112232    45556666678


Q ss_pred             CcEEEEccc
Q 022471          146 FDAVMHFAA  154 (296)
Q Consensus       146 ~D~vi~~Ag  154 (296)
                      +|+||-...
T Consensus        77 id~vIP~~e   85 (389)
T PRK06849         77 IDLLIPTCE   85 (389)
T ss_pred             CCEEEECCh
Confidence            999998765

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.14  E-value=0.0048  Score=58.20  Aligned_cols=75  Identities=24%  Similarity=0.273  Sum_probs=56.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +++++|.|+ |.+|..+++.|.+.|++|+++++++...+    .+.+.   ...+.++.+|.++.+.++++-- .+.|.|
T Consensus       231 ~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~----~~~~~---~~~~~~i~gd~~~~~~L~~~~~-~~a~~v  301 (453)
T PRK09496        231 VKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAE----ELAEE---LPNTLVLHGDGTDQELLEEEGI-DEADAF  301 (453)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHH----HHHHH---CCCCeEEECCCCCHHHHHhcCC-ccCCEE
Confidence            488999998 99999999999999999999986543322    22221   2356788999999988876543 468888


Q ss_pred             EEcc
Q 022471          150 MHFA  153 (296)
Q Consensus       150 i~~A  153 (296)
                      |-+.
T Consensus       302 i~~~  305 (453)
T PRK09496        302 IALT  305 (453)
T ss_pred             EECC
Confidence            8554

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.13  E-value=0.004  Score=56.26  Aligned_cols=102  Identities=22%  Similarity=0.187  Sum_probs=59.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +.+|||+||+|++|...++-+.+.|+.++++..++.+   .. .++++... .-+.+..-|+  .+.++++....++|+|
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k---~~-~~~~lGAd-~vi~y~~~~~--~~~v~~~t~g~gvDvv  215 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEK---LE-LLKELGAD-HVINYREEDF--VEQVRELTGGKGVDVV  215 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHH---HH-HHHhcCCC-EEEcCCcccH--HHHHHHHcCCCCceEE
Confidence            3899999999999999999888899776666533322   22 33333211 1111112221  2344444433479999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccc
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCA  198 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~  198 (296)
                      +...|..           +       ....+..+++.  ++++.+....
T Consensus       216 ~D~vG~~-----------~-------~~~~l~~l~~~--G~lv~ig~~~  244 (326)
T COG0604         216 LDTVGGD-----------T-------FAASLAALAPG--GRLVSIGALS  244 (326)
T ss_pred             EECCCHH-----------H-------HHHHHHHhccC--CEEEEEecCC
Confidence            9988731           1       11244445443  6888877755

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=97.11  E-value=0.0066  Score=54.22  Aligned_cols=108  Identities=24%  Similarity=0.272  Sum_probs=64.1

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCc-------------------chhhhhhhhhCCCCCceEEEEccC
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGN-------------------IGAVKVLQELFPEPGRLQFIYADL  131 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~Dl  131 (296)
                      +|+|.|+ ||+|.++++.|+..|. +++++|...-..                   +.+.+.++++.+. .++..+..++
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~-v~V~~~~~~i   78 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPN-VKIVAYHANI   78 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCC-CeEEEEeccC
Confidence            4889996 9999999999999997 788887432211                   1112333333322 4566666777


Q ss_pred             CCHHHHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccccccc
Q 022471          132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYG  201 (296)
Q Consensus       132 ~d~~~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g  201 (296)
                      .+.....+++  .++|+||.+.-         +        ...-..+-+.+.+.+. .+|..++.+.+|
T Consensus        79 ~~~~~~~~f~--~~~DvVv~a~D---------n--------~~ar~~in~~c~~~~i-p~I~~gt~G~~G  128 (312)
T cd01489          79 KDPDFNVEFF--KQFDLVFNALD---------N--------LAARRHVNKMCLAADV-PLIESGTTGFLG  128 (312)
T ss_pred             CCccchHHHH--hcCCEEEECCC---------C--------HHHHHHHHHHHHHCCC-CEEEEecCccee
Confidence            7643334555  46888887642         1        2222234455566654 566666655443

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.08  E-value=0.013  Score=44.15  Aligned_cols=71  Identities=25%  Similarity=0.352  Sum_probs=51.2

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEEEc
Q 022471           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHF  152 (296)
Q Consensus        73 vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi~~  152 (296)
                      |+|.|. |-+|..+++.|.+.+.+|+++++++...    +.+.+     ..+.++.+|.+|.+.++++-- .+.|.+|-+
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~----~~~~~-----~~~~~i~gd~~~~~~l~~a~i-~~a~~vv~~   69 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERV----EELRE-----EGVEVIYGDATDPEVLERAGI-EKADAVVIL   69 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHH----HHHHH-----TTSEEEES-TTSHHHHHHTTG-GCESEEEEE
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHH----HHHHh-----cccccccccchhhhHHhhcCc-cccCEEEEc
Confidence            577886 7899999999999777999998654332    22222     237899999999999988643 367888866


Q ss_pred             cc
Q 022471          153 AA  154 (296)
Q Consensus       153 Ag  154 (296)
                      ..
T Consensus        70 ~~   71 (116)
T PF02254_consen   70 TD   71 (116)
T ss_dssp             SS
T ss_pred             cC
Confidence            53

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.06  E-value=0.0012  Score=63.39  Aligned_cols=34  Identities=24%  Similarity=0.224  Sum_probs=30.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      +|+|+|+|+ ||+|++++..|++.|++|++++|+.
T Consensus       379 ~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~  412 (529)
T PLN02520        379 GKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTY  412 (529)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            389999998 7999999999999999999988753

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=97.06  E-value=0.0071  Score=55.51  Aligned_cols=79  Identities=25%  Similarity=0.333  Sum_probs=52.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCC-------------------cchhhhhhhhhCCCCCceEEEEcc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRG-------------------NIGAVKVLQELFPEPGRLQFIYAD  130 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~D  130 (296)
                      .+|+|.|+ ||+|.++++.|+..|. +++++|...-.                   .+.+.+.+.++.+. .+++.+...
T Consensus        42 ~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~-v~i~~~~~~  119 (370)
T PRK05600         42 ARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPD-IRVNALRER  119 (370)
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCC-CeeEEeeee
Confidence            78999995 9999999999999996 88888864211                   11122333333332 355556555


Q ss_pred             CCCHHHHHHHhhcCCCcEEEEccc
Q 022471          131 LGDAKAVNKFFSENAFDAVMHFAA  154 (296)
Q Consensus       131 l~d~~~v~~~~~~~~~D~vi~~Ag  154 (296)
                      ++ .+.+.+++  .++|+||.|.-
T Consensus       120 i~-~~~~~~~~--~~~DlVid~~D  140 (370)
T PRK05600        120 LT-AENAVELL--NGVDLVLDGSD  140 (370)
T ss_pred             cC-HHHHHHHH--hCCCEEEECCC
Confidence            64 44566677  56899998763

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.05  E-value=0.003  Score=57.40  Aligned_cols=78  Identities=19%  Similarity=0.223  Sum_probs=51.8

Q ss_pred             CCccEEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhh--cC
Q 022471           68 EGVTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS--EN  144 (296)
Q Consensus        68 ~~~k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~--~~  144 (296)
                      ..++.|||.||+||+|++.++-....| ..|+.++ +. +..   +.++++.   ..   ...|..+.+-+++..+  ..
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~-s~-e~~---~l~k~lG---Ad---~vvdy~~~~~~e~~kk~~~~  224 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTAC-SK-EKL---ELVKKLG---AD---EVVDYKDENVVELIKKYTGK  224 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEc-cc-chH---HHHHHcC---Cc---EeecCCCHHHHHHHHhhcCC
Confidence            344899999999999999999888889 4555544 22 222   2333331   11   1457777655555554  35


Q ss_pred             CCcEEEEccccc
Q 022471          145 AFDAVMHFAAVA  156 (296)
Q Consensus       145 ~~D~vi~~Ag~~  156 (296)
                      ++|+|+.|.|-.
T Consensus       225 ~~DvVlD~vg~~  236 (347)
T KOG1198|consen  225 GVDVVLDCVGGS  236 (347)
T ss_pred             CccEEEECCCCC
Confidence            799999999853

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.03  E-value=0.0052  Score=55.90  Aligned_cols=101  Identities=17%  Similarity=0.141  Sum_probs=58.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCcchhhhhhhhhCCCCCceEEE-EccCCCHHHHHHHhhcCCCc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFI-YADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      |++|.|.||||.+|.++++.|.+. +++++.+.++....+...+.    .   ..+..+ ..++.+.+..  .+  .++|
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~----~---~~~~~~~~~~~~~~~~~--~~--~~vD   70 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDV----H---PHLRGLVDLVLEPLDPE--IL--AGAD   70 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHh----C---cccccccCceeecCCHH--Hh--cCCC
Confidence            478999999999999999999987 67887766432222212111    1   111111 1223333322  22  4699


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccc
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATY  200 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~  200 (296)
                      +||-|...                  .....+++.+.+.| .+||=.|+..-+
T Consensus        71 ~Vf~alP~------------------~~~~~~v~~a~~aG-~~VID~S~~fR~  104 (343)
T PRK00436         71 VVFLALPH------------------GVSMDLAPQLLEAG-VKVIDLSADFRL  104 (343)
T ss_pred             EEEECCCc------------------HHHHHHHHHHHhCC-CEEEECCcccCC
Confidence            99987642                  11234555665655 478888875544

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=97.00  E-value=0.011  Score=49.27  Aligned_cols=107  Identities=20%  Similarity=0.324  Sum_probs=65.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCC-------------------cchhhhhhhhhCCCCCceEEEEcc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRG-------------------NIGAVKVLQELFPEPGRLQFIYAD  130 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~D  130 (296)
                      ++|+|.|+ |++|.++++.|+..|. +++++|...-.                   .+.+.+.++++.+. .+++.+...
T Consensus        22 s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~-v~i~~~~~~   99 (197)
T cd01492          22 ARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPR-VKVSVDTDD   99 (197)
T ss_pred             CcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCC-CEEEEEecC
Confidence            78999985 6699999999999997 68888754211                   11123334454433 355555555


Q ss_pred             CCCHHHHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccccccc
Q 022471          131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYG  201 (296)
Q Consensus       131 l~d~~~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g  201 (296)
                      +.+  ...+.+  .++|+||.+..         +.        ..-..+-+.+++.+. .+|+.++.+.+|
T Consensus       100 ~~~--~~~~~~--~~~dvVi~~~~---------~~--------~~~~~ln~~c~~~~i-p~i~~~~~G~~G  148 (197)
T cd01492         100 ISE--KPEEFF--SQFDVVVATEL---------SR--------AELVKINELCRKLGV-KFYATGVHGLFG  148 (197)
T ss_pred             ccc--cHHHHH--hCCCEEEECCC---------CH--------HHHHHHHHHHHHcCC-CEEEEEecCCEE
Confidence            542  234455  46899997642         11        112234467777775 678877766554

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.98  E-value=0.013  Score=51.22  Aligned_cols=108  Identities=19%  Similarity=0.278  Sum_probs=64.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCC---cc----------------hhhhhhhhhCCCCCceEEEEcc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRG---NI----------------GAVKVLQELFPEPGRLQFIYAD  130 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~---~~----------------~~~~~~~~~~~~~~~~~~~~~D  130 (296)
                      .+|+|.| .||+|+++++.|++.| -+++++|...-.   ..                ...+.+.+..+. .++..+. +
T Consensus        31 s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~-~~V~~i~-~  107 (268)
T PRK15116         31 AHICVVG-IGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPE-CRVTVVD-D  107 (268)
T ss_pred             CCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCC-cEEEEEe-c
Confidence            7899998 5999999999999999 488888754211   00                112223333222 2344442 3


Q ss_pred             CCCHHHHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccc
Q 022471          131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATY  200 (296)
Q Consensus       131 l~d~~~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~  200 (296)
                      ..+.+.+.+++. .++|+||.+...                 +..-..+.+++++.+. .+|.+..++..
T Consensus       108 ~i~~e~~~~ll~-~~~D~VIdaiD~-----------------~~~k~~L~~~c~~~~i-p~I~~gGag~k  158 (268)
T PRK15116        108 FITPDNVAEYMS-AGFSYVIDAIDS-----------------VRPKAALIAYCRRNKI-PLVTTGGAGGQ  158 (268)
T ss_pred             ccChhhHHHHhc-CCCCEEEEcCCC-----------------HHHHHHHHHHHHHcCC-CEEEECCcccC
Confidence            334566666663 368999987642                 1122347777887765 56666554443

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.97  E-value=0.0069  Score=54.12  Aligned_cols=34  Identities=35%  Similarity=0.336  Sum_probs=31.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      .+++|+||+|.+|.++++.+...|++|+++.+++
T Consensus       164 ~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~  197 (332)
T cd08259         164 DTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSP  197 (332)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCH
Confidence            7899999999999999999999999999887644

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.96  E-value=0.0066  Score=50.84  Aligned_cols=77  Identities=21%  Similarity=0.297  Sum_probs=52.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecC---CCCcch---------------hhhhhhhhCCCCCceEEEEccC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNL---SRGNIG---------------AVKVLQELFPEPGRLQFIYADL  131 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~---~~~~~~---------------~~~~~~~~~~~~~~~~~~~~Dl  131 (296)
                      ++|+|.|+ |++|+.++..|++.|. +++++|.+   ..+..+               +.+.+.++.+. .++..+..++
T Consensus        22 ~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~-~~i~~~~~~i   99 (200)
T TIGR02354        22 ATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPY-TEIEAYDEKI   99 (200)
T ss_pred             CcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCC-CEEEEeeeeC
Confidence            78999996 8999999999999998 69999876   222111               12222233222 3455555666


Q ss_pred             CCHHHHHHHhhcCCCcEEEEc
Q 022471          132 GDAKAVNKFFSENAFDAVMHF  152 (296)
Q Consensus       132 ~d~~~v~~~~~~~~~D~vi~~  152 (296)
                      + .+.+.+++  .++|+||-+
T Consensus       100 ~-~~~~~~~~--~~~DlVi~a  117 (200)
T TIGR02354       100 T-EENIDKFF--KDADIVCEA  117 (200)
T ss_pred             C-HhHHHHHh--cCCCEEEEC
Confidence            4 45667777  578999976

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=96.93  E-value=0.0055  Score=55.78  Aligned_cols=101  Identities=17%  Similarity=0.177  Sum_probs=58.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhC-CCeEEEE-ecCCCCcchhhhhhhhhCCCCCceEEE-EccCCCHHHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIV-DNLSRGNIGAVKVLQELFPEPGRLQFI-YADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~-G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      ++|.|.||||.+|.++++.|.+. +++++.+ ++.........+.    .+   .+... ..++.+. +.+++.  .++|
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~----~~---~l~~~~~~~~~~~-~~~~~~--~~~D   70 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEV----HP---HLRGLVDLNLEPI-DEEEIA--EDAD   70 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHh----Cc---cccccCCceeecC-CHHHhh--cCCC
Confidence            47999999999999999999987 6677743 4322122211111    11   11110 1112211 123333  3689


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccc
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATY  200 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~  200 (296)
                      +||-|.+..                  ....+++.+.+.| .++|=.|+..=+
T Consensus        71 vVf~alP~~------------------~s~~~~~~~~~~G-~~VIDlS~~fR~  104 (346)
T TIGR01850        71 VVFLALPHG------------------VSAELAPELLAAG-VKVIDLSADFRL  104 (346)
T ss_pred             EEEECCCch------------------HHHHHHHHHHhCC-CEEEeCChhhhc
Confidence            999887521                  3455777776666 588888885543

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.91  E-value=0.0091  Score=53.93  Aligned_cols=76  Identities=16%  Similarity=0.139  Sum_probs=47.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhh-hCCCCCceEEEEc-cCCCH-HHHHHHhhcCCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQE-LFPEPGRLQFIYA-DLGDA-KAVNKFFSENAF  146 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~-Dl~d~-~~v~~~~~~~~~  146 (296)
                      +.+|+|+||+|++|..+++.+...|++|++++++..+.+    .+++ +   +.. .++.. +-.+. +.+.+... .++
T Consensus       152 g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~----~~~~~l---Ga~-~vi~~~~~~~~~~~i~~~~~-~gv  222 (338)
T cd08295         152 GETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVD----LLKNKL---GFD-DAFNYKEEPDLDAALKRYFP-NGI  222 (338)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH----HHHHhc---CCc-eeEEcCCcccHHHHHHHhCC-CCc
Confidence            379999999999999999888889999988875543322    2222 2   111 11211 11121 23333332 579


Q ss_pred             cEEEEccc
Q 022471          147 DAVMHFAA  154 (296)
Q Consensus       147 D~vi~~Ag  154 (296)
                      |+++++.|
T Consensus       223 d~v~d~~g  230 (338)
T cd08295         223 DIYFDNVG  230 (338)
T ss_pred             EEEEECCC
Confidence            99999876

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.91  E-value=0.016  Score=49.60  Aligned_cols=107  Identities=18%  Similarity=0.206  Sum_probs=64.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCc-------------------chhhhhhhhhCCCCCceEEEEcc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGN-------------------IGAVKVLQELFPEPGRLQFIYAD  130 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~D  130 (296)
                      .+|+|.| .||+|+++++.|++.|. +++++|...-..                   +...+.+.++.+. .+++.+...
T Consensus        12 ~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~-~~V~~~~~~   89 (231)
T cd00755          12 AHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPE-CEVDAVEEF   89 (231)
T ss_pred             CCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCC-cEEEEeeee
Confidence            7899998 59999999999999997 788887432111                   1112333333332 345555544


Q ss_pred             CCCHHHHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccccc
Q 022471          131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCAT  199 (296)
Q Consensus       131 l~d~~~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~  199 (296)
                      ++ .+.+..++. .++|+||.+...                 ...-..+.+++++.+. .+|...+.+.
T Consensus        90 i~-~~~~~~l~~-~~~D~VvdaiD~-----------------~~~k~~L~~~c~~~~i-p~I~s~g~g~  138 (231)
T cd00755          90 LT-PDNSEDLLG-GDPDFVVDAIDS-----------------IRAKVALIAYCRKRKI-PVISSMGAGG  138 (231)
T ss_pred             cC-HhHHHHHhc-CCCCEEEEcCCC-----------------HHHHHHHHHHHHHhCC-CEEEEeCCcC
Confidence            44 345555553 368999987531                 1223346677877764 5655544443

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK08223 hypothetical protein; Validated

Probab=96.88  E-value=0.014  Score=51.41  Aligned_cols=105  Identities=15%  Similarity=0.194  Sum_probs=63.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCc-------------------chhhhhhhhhCCCCCceEEEEcc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGN-------------------IGAVKVLQELFPEPGRLQFIYAD  130 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~D  130 (296)
                      .+|+|.|+ ||+|++++..|+..|. +++++|.+.-..                   +.+.+.+.++.+. .+++.+...
T Consensus        28 s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~-v~V~~~~~~  105 (287)
T PRK08223         28 SRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPE-LEIRAFPEG  105 (287)
T ss_pred             CCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCC-CEEEEEecc
Confidence            78999995 8999999999999997 777887532111                   1122333333332 455556555


Q ss_pred             CCCHHHHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       131 l~d~~~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      ++. +.+.+++  .++|+||.+.-         +.      ++..-..+-+++.+.+. .+|+.+.
T Consensus       106 l~~-~n~~~ll--~~~DlVvD~~D---------~~------~~~~r~~ln~~c~~~~i-P~V~~~~  152 (287)
T PRK08223        106 IGK-ENADAFL--DGVDVYVDGLD---------FF------EFDARRLVFAACQQRGI-PALTAAP  152 (287)
T ss_pred             cCc-cCHHHHH--hCCCEEEECCC---------CC------cHHHHHHHHHHHHHcCC-CEEEEec
Confidence            653 3456666  56899885542         10      01122335567777764 5666554

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.86  E-value=0.00094  Score=55.94  Aligned_cols=34  Identities=26%  Similarity=0.320  Sum_probs=30.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      +|+|+|+|. |.+|+++++.|.+.|++|++.+++.
T Consensus        28 gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~   61 (200)
T cd01075          28 GKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINE   61 (200)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            389999997 6999999999999999999888654

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.82  E-value=0.0021  Score=56.86  Aligned_cols=73  Identities=22%  Similarity=0.190  Sum_probs=48.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      ++|+|.|+ ||.|++++..|++.|. +|++++|+..+.+...+.+....   ....+..  .   +++.+.+  .+.|+|
T Consensus       128 k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~---~~~~~~~--~---~~~~~~~--~~aDiV  196 (284)
T PRK12549        128 ERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARF---PAARATA--G---SDLAAAL--AAADGL  196 (284)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhC---CCeEEEe--c---cchHhhh--CCCCEE
Confidence            88999996 8899999999999997 79999887655544444433221   1122211  1   2233334  468999


Q ss_pred             EEccc
Q 022471          150 MHFAA  154 (296)
Q Consensus       150 i~~Ag  154 (296)
                      ||+..
T Consensus       197 InaTp  201 (284)
T PRK12549        197 VHATP  201 (284)
T ss_pred             EECCc
Confidence            99943

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.80  E-value=0.01  Score=52.63  Aligned_cols=81  Identities=12%  Similarity=0.122  Sum_probs=48.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCC-CceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEP-GRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      |+++|.|+ ||-+++++..|+..|. +|+++.|+....+++.+..+...... ..+.+  .++.+.+.+.+.+  .+.|+
T Consensus       125 k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~--~~~~~~~~l~~~~--~~aDi  199 (288)
T PRK12749        125 KTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTV--TDLADQQAFAEAL--ASADI  199 (288)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEE--echhhhhhhhhhc--ccCCE
Confidence            89999996 7889999999999996 79999886542233333322221110 11222  2222222233333  46899


Q ss_pred             EEEccccc
Q 022471          149 VMHFAAVA  156 (296)
Q Consensus       149 vi~~Ag~~  156 (296)
                      |||+..+.
T Consensus       200 vINaTp~G  207 (288)
T PRK12749        200 LTNGTKVG  207 (288)
T ss_pred             EEECCCCC
Confidence            99987553

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.79  E-value=0.0067  Score=51.51  Aligned_cols=37  Identities=30%  Similarity=0.355  Sum_probs=32.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN  107 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~  107 (296)
                      |+|.|.||+|.+|..+++.|++.|++|++.+|++.+.
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~   37 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKA   37 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHH
Confidence            4799999999999999999999999999998765443

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.78  E-value=0.0032  Score=55.80  Aligned_cols=68  Identities=19%  Similarity=0.101  Sum_probs=47.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +++++|.|. |.+|+.+++.|...|++|++.+|+.....    .+.+.     ....     .+.+++.+++  .+.|+|
T Consensus       151 gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~----~~~~~-----g~~~-----~~~~~l~~~l--~~aDiV  213 (287)
T TIGR02853       151 GSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLA----RITEM-----GLIP-----FPLNKLEEKV--AEIDIV  213 (287)
T ss_pred             CCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHHC-----CCee-----ecHHHHHHHh--ccCCEE
Confidence            389999997 88999999999999999999987643211    11111     1111     1244566666  578999


Q ss_pred             EEccc
Q 022471          150 MHFAA  154 (296)
Q Consensus       150 i~~Ag  154 (296)
                      |++..
T Consensus       214 int~P  218 (287)
T TIGR02853       214 INTIP  218 (287)
T ss_pred             EECCC
Confidence            99763

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.78  E-value=0.02  Score=49.11  Aligned_cols=78  Identities=19%  Similarity=0.320  Sum_probs=48.3

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcc-------------------hhhhhhhhhCCCCCceEEEEccC
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNI-------------------GAVKVLQELFPEPGRLQFIYADL  131 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~Dl  131 (296)
                      +|+|.| .||+|.++++.|+..|. +++++|.+.-+..                   .+.+.+++..+. .++..+..++
T Consensus         1 kVlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~-v~i~~~~~~i   78 (234)
T cd01484           1 KVLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPN-CKVVPYQNKV   78 (234)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCC-CEEEEEeccC
Confidence            478888 69999999999999997 7788875421110                   112222333322 4566666777


Q ss_pred             CCHHHH-HHHhhcCCCcEEEEcc
Q 022471          132 GDAKAV-NKFFSENAFDAVMHFA  153 (296)
Q Consensus       132 ~d~~~v-~~~~~~~~~D~vi~~A  153 (296)
                      .+.++. ..++  .++|+||.+.
T Consensus        79 ~~~~~~~~~f~--~~~DvVi~a~   99 (234)
T cd01484          79 GPEQDFNDTFF--EQFHIIVNAL   99 (234)
T ss_pred             ChhhhchHHHH--hCCCEEEECC
Confidence            554332 2344  4688888764

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.77  E-value=0.012  Score=53.38  Aligned_cols=95  Identities=14%  Similarity=0.184  Sum_probs=55.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCe---EEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYR---VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (296)
                      |++|.|+||||.+|.++++.|.+++|.   +..+.. .+...   +.+. .    ..   ...++.+.+.. + +  .++
T Consensus         4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s-~~~aG---~~l~-~----~~---~~l~~~~~~~~-~-~--~~v   67 (336)
T PRK05671          4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLAS-SESAG---HSVP-F----AG---KNLRVREVDSF-D-F--SQV   67 (336)
T ss_pred             CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEEC-cccCC---Ceec-c----CC---cceEEeeCChH-H-h--cCC
Confidence            378999999999999999999987763   333332 22111   1111 0    11   12333333222 1 3  368


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccccc
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCAT  199 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~  199 (296)
                      |++|-+++..                  ....+++.+.+.|. ++|=.||..-
T Consensus        68 D~vFla~p~~------------------~s~~~v~~~~~~G~-~VIDlS~~fR  101 (336)
T PRK05671         68 QLAFFAAGAA------------------VSRSFAEKARAAGC-SVIDLSGALP  101 (336)
T ss_pred             CEEEEcCCHH------------------HHHHHHHHHHHCCC-eEEECchhhc
Confidence            9999877411                  12337777777664 6777777553

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=96.77  E-value=0.044  Score=48.88  Aligned_cols=112  Identities=14%  Similarity=0.143  Sum_probs=68.6

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCC-CCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           73 VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        73 vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |.|.|+ |.+|..++..|+..|. +|+++|+++.........+..... ......+ ... +|.   +. +  .+.|+||
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I-~~t-~d~---~~-l--~dADiVI   71 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKV-TGT-NDY---ED-I--AGSDVVV   71 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEE-EEc-CCH---HH-h--CCCCEEE
Confidence            468998 9999999999998876 999999875432211111111110 0011111 110 222   22 3  5789999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEE-EEEc
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL-IYSS  195 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~ri-V~~S  195 (296)
                      .++|.....  ..+..+....|+...+.+++.+.+...+.+ |.+|
T Consensus        72 it~g~p~~~--~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s  115 (300)
T cd01339          72 ITAGIPRKP--GMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVT  115 (300)
T ss_pred             EecCCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            999975332  233445667788888889999988775544 4444

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.75  E-value=0.01  Score=51.19  Aligned_cols=98  Identities=17%  Similarity=0.182  Sum_probs=59.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHH--HhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNK--FFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~--~~~~~~~D~  148 (296)
                      .+|+|+|+++ +|..+++.+...|.+|+++++++.+    .+.+++..   . -..  .|..+.+....  .....++|+
T Consensus       136 ~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~----~~~~~~~g---~-~~~--~~~~~~~~~~~~~~~~~~~~d~  204 (271)
T cd05188         136 DTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEK----LELAKELG---A-DHV--IDYKEEDLEEELRLTGGGGADV  204 (271)
T ss_pred             CEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHH----HHHHHHhC---C-cee--ccCCcCCHHHHHHHhcCCCCCE
Confidence            7899999998 9999999999999999998764322    22222221   1 111  23322222222  223357999


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccc
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCA  198 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~  198 (296)
                      ++++++..                 .....+++.+++  .++++.++...
T Consensus       205 vi~~~~~~-----------------~~~~~~~~~l~~--~G~~v~~~~~~  235 (271)
T cd05188         205 VIDAVGGP-----------------ETLAQALRLLRP--GGRIVVVGGTS  235 (271)
T ss_pred             EEECCCCH-----------------HHHHHHHHhccc--CCEEEEEccCC
Confidence            99998731                 122334555543  35888888743

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.74  E-value=0.0048  Score=55.77  Aligned_cols=76  Identities=17%  Similarity=0.104  Sum_probs=46.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC-HHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~D~  148 (296)
                      .+|+|+||+|++|..+++.+...|+ +|++++++..+.+    .+.+..  +.. .++..+-.+ .+.+.++.. .++|+
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~----~~~~~l--Ga~-~vi~~~~~~~~~~i~~~~~-~gvd~  227 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQ----LLKSEL--GFD-AAINYKTDNVAERLRELCP-EGVDV  227 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHH----HHHHhc--CCc-EEEECCCCCHHHHHHHHCC-CCceE
Confidence            7899999999999999988888898 7988875432222    222211  111 122111112 233444433 57999


Q ss_pred             EEEccc
Q 022471          149 VMHFAA  154 (296)
Q Consensus       149 vi~~Ag  154 (296)
                      ++++.|
T Consensus       228 vid~~g  233 (345)
T cd08293         228 YFDNVG  233 (345)
T ss_pred             EEECCC
Confidence            999887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.73  E-value=0.0041  Score=54.94  Aligned_cols=74  Identities=16%  Similarity=0.174  Sum_probs=48.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH---HHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~D  147 (296)
                      ++++|+|++|++|..+++.+...|++|++++++....    +.+++.   +.. .  ..|..+.   +.+.+.....++|
T Consensus       141 ~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~----~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~~~~~d  210 (323)
T cd05276         141 ETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKL----EACRAL---GAD-V--AINYRTEDFAEEVKEATGGRGVD  210 (323)
T ss_pred             CEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHH----HHHHHc---CCC-E--EEeCCchhHHHHHHHHhCCCCeE
Confidence            7899999999999999999999999998887643222    222222   111 1  2233332   2333333335799


Q ss_pred             EEEEccc
Q 022471          148 AVMHFAA  154 (296)
Q Consensus       148 ~vi~~Ag  154 (296)
                      ++++++|
T Consensus       211 ~vi~~~g  217 (323)
T cd05276         211 VILDMVG  217 (323)
T ss_pred             EEEECCc
Confidence            9999987

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.72  E-value=0.021  Score=43.89  Aligned_cols=97  Identities=23%  Similarity=0.301  Sum_probs=54.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHh-CCCeEEE-EecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLK-DSYRVTI-VDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~-~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      ++|.|.|++|-+|+.+++.+.+ .+++++. ++|.+...  ..+.+.+.....      ...+.-.+++++++++  +|+
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~--~g~d~g~~~~~~------~~~~~v~~~l~~~~~~--~DV   70 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAK--VGKDVGELAGIG------PLGVPVTDDLEELLEE--ADV   70 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTT--TTSBCHHHCTSS------T-SSBEBS-HHHHTTH---SE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCccc--ccchhhhhhCcC------CcccccchhHHHhccc--CCE
Confidence            5799999999999999999999 6888765 45443111  111111111100      1112222566777743  899


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      +|....                  -..+...++.+.+++. .+|.-+|
T Consensus        71 vIDfT~------------------p~~~~~~~~~~~~~g~-~~ViGTT   99 (124)
T PF01113_consen   71 VIDFTN------------------PDAVYDNLEYALKHGV-PLVIGTT   99 (124)
T ss_dssp             EEEES-------------------HHHHHHHHHHHHHHT--EEEEE-S
T ss_pred             EEEcCC------------------hHHhHHHHHHHHhCCC-CEEEECC
Confidence            998752                  2344557777888765 4544333

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.69  E-value=0.013  Score=51.73  Aligned_cols=100  Identities=18%  Similarity=0.147  Sum_probs=63.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCC-CHHHHHHHhhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG-DAKAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~v~~~~~~~~~D~  148 (296)
                      ++++-|+|+.| +|.--++.-.+.|++|+++++..++.+++.+.   +     ..+.+ .|.+ |++.++++.+  -.|.
T Consensus       182 G~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~---L-----GAd~f-v~~~~d~d~~~~~~~--~~dg  249 (360)
T KOG0023|consen  182 GKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKS---L-----GADVF-VDSTEDPDIMKAIMK--TTDG  249 (360)
T ss_pred             CcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHh---c-----Cccee-EEecCCHHHHHHHHH--hhcC
Confidence            49999999988 99877777777799999999876565544443   2     12222 3555 7777777773  3455


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccc
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCA  198 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~  198 (296)
                      ++|++......               ....++.+++..  +++|+++-..
T Consensus       250 ~~~~v~~~a~~---------------~~~~~~~~lk~~--Gt~V~vg~p~  282 (360)
T KOG0023|consen  250 GIDTVSNLAEH---------------ALEPLLGLLKVN--GTLVLVGLPE  282 (360)
T ss_pred             cceeeeecccc---------------chHHHHHHhhcC--CEEEEEeCcC
Confidence            55554321110               012356666654  4899988744

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.65  E-value=0.0096  Score=48.06  Aligned_cols=72  Identities=22%  Similarity=0.255  Sum_probs=44.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCC----CceEEEEccCCCHHHHHHHhh
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEP----GRLQFIYADLGDAKAVNKFFS  142 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~d~~~v~~~~~  142 (296)
                      |++|-+.|- |-+|+.+++.|+++|++|++.+|++.+.++..+.-.....+.    .+...+..-+.+.+++++++.
T Consensus         1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~   76 (163)
T PF03446_consen    1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLF   76 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHH
T ss_pred             CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhh
Confidence            689999995 999999999999999999999976544333222110000000    123455566777777777654

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.63  E-value=0.005  Score=57.36  Aligned_cols=73  Identities=11%  Similarity=0.128  Sum_probs=49.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +++|+|.|+ |++|+.+++.|++.|. +++++.|+..+..   +..++. +   ..     .+...+++.+.+  ...|+
T Consensus       181 ~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~---~La~~~-~---~~-----~~~~~~~l~~~l--~~aDi  245 (414)
T PRK13940        181 SKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQ---KITSAF-R---NA-----SAHYLSELPQLI--KKADI  245 (414)
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHH---HHHHHh-c---CC-----eEecHHHHHHHh--ccCCE
Confidence            389999997 9999999999999996 6888876543322   222221 1   11     122345666666  56899


Q ss_pred             EEEcccccC
Q 022471          149 VMHFAAVAY  157 (296)
Q Consensus       149 vi~~Ag~~~  157 (296)
                      ||++.+...
T Consensus       246 VI~aT~a~~  254 (414)
T PRK13940        246 IIAAVNVLE  254 (414)
T ss_pred             EEECcCCCC
Confidence            999988644

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.62  E-value=0.0062  Score=54.52  Aligned_cols=73  Identities=18%  Similarity=0.165  Sum_probs=47.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC---HHHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD---AKAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d---~~~v~~~~~~~~~D  147 (296)
                      .+|+|+||+|++|..+++.+...|++|++++++..+.    +.++++   +.. .++  |-.+   .+.+.++.. .++|
T Consensus       145 ~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~----~~l~~~---Ga~-~vi--~~~~~~~~~~v~~~~~-~gvd  213 (329)
T cd08294         145 ETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKV----AWLKEL---GFD-AVF--NYKTVSLEEALKEAAP-DGID  213 (329)
T ss_pred             CEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHHc---CCC-EEE--eCCCccHHHHHHHHCC-CCcE
Confidence            7999999999999999988888999998887544322    223332   111 122  2222   233443332 5799


Q ss_pred             EEEEccc
Q 022471          148 AVMHFAA  154 (296)
Q Consensus       148 ~vi~~Ag  154 (296)
                      +++++.|
T Consensus       214 ~vld~~g  220 (329)
T cd08294         214 CYFDNVG  220 (329)
T ss_pred             EEEECCC
Confidence            9999876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.62  E-value=0.007  Score=55.64  Aligned_cols=73  Identities=23%  Similarity=0.221  Sum_probs=52.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      ++|+|.|+ |.+|...++.|...|++|++++|+..+.+    .+....   ..  .+..+..+.+.+.+.+  .+.|+||
T Consensus       168 ~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~----~l~~~~---g~--~v~~~~~~~~~l~~~l--~~aDvVI  235 (370)
T TIGR00518       168 GDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLR----QLDAEF---GG--RIHTRYSNAYEIEDAV--KRADLLI  235 (370)
T ss_pred             ceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHH----HHHHhc---Cc--eeEeccCCHHHHHHHH--ccCCEEE
Confidence            67999987 89999999999999999999987543322    121111   11  1234556777888887  5789999


Q ss_pred             Ecccc
Q 022471          151 HFAAV  155 (296)
Q Consensus       151 ~~Ag~  155 (296)
                      ++++.
T Consensus       236 ~a~~~  240 (370)
T TIGR00518       236 GAVLI  240 (370)
T ss_pred             Ecccc
Confidence            98865

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=96.61  E-value=0.018  Score=51.37  Aligned_cols=73  Identities=21%  Similarity=0.251  Sum_probs=47.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC--HHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD--AKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~D~  148 (296)
                      .+|+|.|++|.+|..+++.+...|.+|+++++++.+.+    .++++   +  +..+ .|..+  .+.+.++ ...++|+
T Consensus       148 ~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~----~~~~~---g--~~~v-~~~~~~~~~~~~~~-~~~~~d~  216 (326)
T cd08289         148 GPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAAD----YLKKL---G--AKEV-IPREELQEESIKPL-EKQRWAG  216 (326)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHH----HHHHc---C--CCEE-EcchhHHHHHHHhh-ccCCcCE
Confidence            78999999999999999999999999998876544322    22222   1  1111 12222  2334433 2356999


Q ss_pred             EEEccc
Q 022471          149 VMHFAA  154 (296)
Q Consensus       149 vi~~Ag  154 (296)
                      ++++.|
T Consensus       217 vld~~g  222 (326)
T cd08289         217 AVDPVG  222 (326)
T ss_pred             EEECCc
Confidence            999876

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=96.60  E-value=0.055  Score=46.99  Aligned_cols=114  Identities=18%  Similarity=0.132  Sum_probs=70.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      +-+|.|.||+||||.-|...|...-.  +..+.|....+  .....+.-     -+........+-.+.+++++  .+.|
T Consensus        28 ~~KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~~~--GVaaDlSH-----I~T~s~V~g~~g~~~L~~al--~~ad   98 (345)
T KOG1494|consen   28 GLKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIANTP--GVAADLSH-----INTNSSVVGFTGADGLENAL--KGAD   98 (345)
T ss_pred             cceEEEEecCCccCccHHHHHhcCcccceeeeeecccCC--cccccccc-----cCCCCceeccCChhHHHHHh--cCCC
Confidence            37899999999999999876654321  23333322111  11111110     01111223444567889988  7899


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEE
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYS  194 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~  194 (296)
                      +||--||+..-+..  .-++.|.+|.-..+.+..++.+......|.+
T Consensus        99 vVvIPAGVPRKPGM--TRDDLFn~NAgIv~~l~~aia~~cP~A~i~v  143 (345)
T KOG1494|consen   99 VVVIPAGVPRKPGM--TRDDLFNINAGIVKTLAAAIAKCCPNALILV  143 (345)
T ss_pred             EEEecCCCCCCCCC--cHHHhhhcchHHHHHHHHHHHhhCccceeEe
Confidence            99999998654322  3456888999888888888888765544443

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.56  E-value=0.0062  Score=54.24  Aligned_cols=66  Identities=21%  Similarity=0.185  Sum_probs=46.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      ++|+|.|. |.+|+.+++.|.+.|++|++++|+...    .+..+..     ...++     +.+++.+.+  .+.|+||
T Consensus       153 ~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~----~~~~~~~-----G~~~~-----~~~~l~~~l--~~aDiVI  215 (296)
T PRK08306        153 SNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAH----LARITEM-----GLSPF-----HLSELAEEV--GKIDIIF  215 (296)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHH----HHHHHHc-----CCeee-----cHHHHHHHh--CCCCEEE
Confidence            89999996 889999999999999999999876432    1122221     12221     234556666  5789999


Q ss_pred             Ecc
Q 022471          151 HFA  153 (296)
Q Consensus       151 ~~A  153 (296)
                      +++
T Consensus       216 ~t~  218 (296)
T PRK08306        216 NTI  218 (296)
T ss_pred             ECC
Confidence            975

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.55  E-value=0.036  Score=51.38  Aligned_cols=108  Identities=19%  Similarity=0.246  Sum_probs=64.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCc-------------------chhhhhhhhhCCCCCceEEEEcc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGN-------------------IGAVKVLQELFPEPGRLQFIYAD  130 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~D  130 (296)
                      .+|+|.|+ ||+|+++++.|+..|. +++++|...-..                   +.+.+.+.++.+. .++..+..+
T Consensus        43 ~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~-v~i~~~~~~  120 (392)
T PRK07878         43 ARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPL-VNVRLHEFR  120 (392)
T ss_pred             CCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCC-cEEEEEecc
Confidence            78999995 9999999999999997 677877432111                   1112223333322 345555556


Q ss_pred             CCCHHHHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccccccc
Q 022471          131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYG  201 (296)
Q Consensus       131 l~d~~~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g  201 (296)
                      ++. +...+++  .++|+||.+..         +        ...-..+-+++.+.+. .+|+.++...+|
T Consensus       121 i~~-~~~~~~~--~~~D~Vvd~~d---------~--------~~~r~~ln~~~~~~~~-p~v~~~~~g~~G  170 (392)
T PRK07878        121 LDP-SNAVELF--SQYDLILDGTD---------N--------FATRYLVNDAAVLAGK-PYVWGSIYRFEG  170 (392)
T ss_pred             CCh-hHHHHHH--hcCCEEEECCC---------C--------HHHHHHHHHHHHHcCC-CEEEEEeccCEE
Confidence            653 3455666  56899987652         1        1112224466666664 577776655444

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.55  E-value=0.012  Score=53.00  Aligned_cols=96  Identities=20%  Similarity=0.111  Sum_probs=62.3

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      .+++|+|+|++ |+|...++...+.|++|++++|++++.+.+.+    +    ..-+++.  -+|.+..+++-+  .+|+
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~----l----GAd~~i~--~~~~~~~~~~~~--~~d~  232 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK----L----GADHVIN--SSDSDALEAVKE--IADA  232 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH----h----CCcEEEE--cCCchhhHHhHh--hCcE
Confidence            34899999987 99999888888899999999987655443332    2    1222222  225555555442  3899


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccc
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTC  197 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~  197 (296)
                      +|.+++ ...                 ....++.++..  +++|.++-.
T Consensus       233 ii~tv~-~~~-----------------~~~~l~~l~~~--G~~v~vG~~  261 (339)
T COG1064         233 IIDTVG-PAT-----------------LEPSLKALRRG--GTLVLVGLP  261 (339)
T ss_pred             EEECCC-hhh-----------------HHHHHHHHhcC--CEEEEECCC
Confidence            999987 211                 12345555543  588888764

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.53  E-value=0.021  Score=52.12  Aligned_cols=33  Identities=21%  Similarity=0.323  Sum_probs=28.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNL  103 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~  103 (296)
                      ++|.|+||||++|+++++.|.+... +++.+.++
T Consensus         4 ~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s   37 (349)
T PRK08664          4 LKVGILGATGMVGQRFVQLLANHPWFEVTALAAS   37 (349)
T ss_pred             cEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcC
Confidence            7899999999999999999998754 88877444

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=96.50  E-value=0.02  Score=52.00  Aligned_cols=91  Identities=12%  Similarity=0.188  Sum_probs=54.0

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCCeEE---EEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSYRVT---IVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~~V~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +|.|.||||++|.++++.|.+++|.++   .+.+.........     .    ........|+. .+    .+  .++|+
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~-----~----~~~~~~~~~~~-~~----~~--~~~D~   64 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVT-----F----KGKELEVNEAK-IE----SF--EGIDI   64 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeee-----e----CCeeEEEEeCC-hH----Hh--cCCCE
Confidence            489999999999999999999888643   3334322221111     0    11334445553 11    23  46899


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccc
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTC  197 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~  197 (296)
                      +|-++|..                  .+..+++.+.+.|. +||=.||.
T Consensus        65 v~~a~g~~------------------~s~~~a~~~~~~G~-~VID~ss~   94 (339)
T TIGR01296        65 ALFSAGGS------------------VSKEFAPKAAKCGA-IVIDNTSA   94 (339)
T ss_pred             EEECCCHH------------------HHHHHHHHHHHCCC-EEEECCHH
Confidence            99988732                  23345555556554 55555553

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.47  E-value=0.032  Score=49.06  Aligned_cols=107  Identities=17%  Similarity=0.169  Sum_probs=64.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +.+|+|+||+|.+|+-..+--.-+|++|+.+.-.+++.    +.+.+..+....+.+..-|+  .+.++++.- .++|+.
T Consensus       151 GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~----~~l~~~lGfD~~idyk~~d~--~~~L~~a~P-~GIDvy  223 (340)
T COG2130         151 GETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKC----DFLTEELGFDAGIDYKAEDF--AQALKEACP-KGIDVY  223 (340)
T ss_pred             CCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHH----HHHHHhcCCceeeecCcccH--HHHHHHHCC-CCeEEE
Confidence            38999999999999987766666899999986433222    23333222212233322221  122333332 689999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCC
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEP  203 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~  203 (296)
                      |-|.|-.           .+       ..+++.+...  .||+.++-++.|+.+
T Consensus       224 feNVGg~-----------v~-------DAv~~~ln~~--aRi~~CG~IS~YN~~  257 (340)
T COG2130         224 FENVGGE-----------VL-------DAVLPLLNLF--ARIPVCGAISQYNAP  257 (340)
T ss_pred             EEcCCch-----------HH-------HHHHHhhccc--cceeeeeehhhcCCC
Confidence            9999832           11       1244444433  599999999999655

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=96.47  E-value=0.031  Score=48.68  Aligned_cols=34  Identities=21%  Similarity=0.305  Sum_probs=27.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhC-CCeEEE-EecC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKD-SYRVTI-VDNL  103 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~-G~~V~~-~~r~  103 (296)
                      +++|.|+|++|.+|+.+++.+.+. +.+++. ++++
T Consensus         1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~   36 (257)
T PRK00048          1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRP   36 (257)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence            378999999999999999998874 678776 4443

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.46  E-value=0.0079  Score=53.17  Aligned_cols=75  Identities=15%  Similarity=0.081  Sum_probs=48.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      ++|+|.|+ ||.|++++.+|++.|. +|+++.|+..+.+++.+.+..    ...+.  .  +...+++...+  ...|+|
T Consensus       126 k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~----~~~~~--~--~~~~~~~~~~~--~~~DiV  194 (282)
T TIGR01809       126 FRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQ----VGVIT--R--LEGDSGGLAIE--KAAEVL  194 (282)
T ss_pred             ceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhh----cCcce--e--ccchhhhhhcc--cCCCEE
Confidence            78999985 9999999999999997 799998765444333332211    01111  1  11223333444  468999


Q ss_pred             EEccccc
Q 022471          150 MHFAAVA  156 (296)
Q Consensus       150 i~~Ag~~  156 (296)
                      ||+....
T Consensus       195 InaTp~g  201 (282)
T TIGR01809       195 VSTVPAD  201 (282)
T ss_pred             EECCCCC
Confidence            9998754

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.46  E-value=0.013  Score=47.58  Aligned_cols=55  Identities=22%  Similarity=0.262  Sum_probs=43.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +++|+|.|++..+|..+++.|.++|++|+++.|+.                              +++.+.+  ...|+|
T Consensus        44 gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~------------------------------~~l~~~l--~~aDiV   91 (168)
T cd01080          44 GKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT------------------------------KNLKEHT--KQADIV   91 (168)
T ss_pred             CCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc------------------------------hhHHHHH--hhCCEE
Confidence            49999999976789999999999999998887531                              2344555  467999


Q ss_pred             EEccccc
Q 022471          150 MHFAAVA  156 (296)
Q Consensus       150 i~~Ag~~  156 (296)
                      |.+.+..
T Consensus        92 Isat~~~   98 (168)
T cd01080          92 IVAVGKP   98 (168)
T ss_pred             EEcCCCC
Confidence            9887753

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.43  E-value=0.0091  Score=52.77  Aligned_cols=77  Identities=17%  Similarity=0.280  Sum_probs=48.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      |+++|.|| ||.|++++-.|++.|+ +|+++.|+..+.+++.+.+....  +... ....|   ..++.+..  ...|+|
T Consensus       128 k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~--~~~~-~~~~~---~~~~~~~~--~~~div  198 (283)
T PRK14027        128 DSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAV--GREA-VVGVD---ARGIEDVI--AAADGV  198 (283)
T ss_pred             CeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc--Ccce-EEecC---HhHHHHHH--hhcCEE
Confidence            88999996 9999999999999997 68888876544444433322111  1111 11122   22233333  358999


Q ss_pred             EEccccc
Q 022471          150 MHFAAVA  156 (296)
Q Consensus       150 i~~Ag~~  156 (296)
                      ||+..+.
T Consensus       199 INaTp~G  205 (283)
T PRK14027        199 VNATPMG  205 (283)
T ss_pred             EEcCCCC
Confidence            9987654

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=96.40  E-value=0.046  Score=48.28  Aligned_cols=104  Identities=23%  Similarity=0.258  Sum_probs=62.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCC-------------------cchhhhhhhhhCCCCCceEEEEcc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRG-------------------NIGAVKVLQELFPEPGRLQFIYAD  130 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~D  130 (296)
                      .+|||.|+ ||+|.++++.|+..|. +++++|...-.                   .+...+.++++.+. .+++.+..+
T Consensus        20 s~VLIvG~-gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~-V~V~~~~~~   97 (286)
T cd01491          20 SNVLISGL-GGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPY-VPVTVSTGP   97 (286)
T ss_pred             CcEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCC-CEEEEEecc
Confidence            68999995 8999999999999997 68888743211                   11123334444332 345555444


Q ss_pred             CCCHHHHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccccccc
Q 022471          131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYG  201 (296)
Q Consensus       131 l~d~~~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g  201 (296)
                      +. .    +.+  .++|+||.+..         +        ...-..+-+++++.+. .+|...+.+.+|
T Consensus        98 ~~-~----~~l--~~fdvVV~~~~---------~--------~~~~~~in~~c~~~~i-pfI~a~~~G~~G  143 (286)
T cd01491          98 LT-T----DEL--LKFQVVVLTDA---------S--------LEDQLKINEFCHSPGI-KFISADTRGLFG  143 (286)
T ss_pred             CC-H----HHH--hcCCEEEEecC---------C--------HHHHHHHHHHHHHcCC-EEEEEeccccEE
Confidence            32 2    234  45788887642         1        1122234566777664 788877766655

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.38  E-value=0.013  Score=53.26  Aligned_cols=34  Identities=18%  Similarity=0.126  Sum_probs=29.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      .+|+|+||+|++|..+++.+...|++|++++++.
T Consensus       160 ~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~  193 (348)
T PLN03154        160 DSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS  193 (348)
T ss_pred             CEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCH
Confidence            7999999999999999988888899998877543

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.30  E-value=0.0096  Score=52.42  Aligned_cols=108  Identities=19%  Similarity=0.265  Sum_probs=63.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +++|+|.|| ||.+++++.+|++.|. +|+++.|+..+.+++.+...+..   ..+.  ..+..+.+...      ..|+
T Consensus       126 ~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~---~~~~--~~~~~~~~~~~------~~dl  193 (283)
T COG0169         126 GKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELG---AAVE--AAALADLEGLE------EADL  193 (283)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc---cccc--ccccccccccc------ccCE
Confidence            389999995 9999999999999995 79999887666555555444321   1111  12222222111      4799


Q ss_pred             EEEcccccCcCCCCc--ChHH-------HHHHHHHH-HHHHHHHHHHcCCC
Q 022471          149 VMHFAAVAYVGESTL--DPLK-------YYHNITSN-TLVVLESMARHGVD  189 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~--~~~~-------~~~~n~~~-t~~ll~~~~~~~~~  189 (296)
                      |||+-.....+...+  .+..       .++.++.. --.+++.+++.|.+
T Consensus       194 iINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~TplL~~A~~~G~~  244 (283)
T COG0169         194 LINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLETPLLREARAQGAK  244 (283)
T ss_pred             EEECCCCCCCCCCCCCCCcHHhcCcCCEEEEeccCCCCCHHHHHHHHcCCe
Confidence            999987643332111  0011       12333332 23377778777753

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.28  E-value=0.012  Score=52.07  Aligned_cols=74  Identities=18%  Similarity=0.179  Sum_probs=47.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH---HHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~D  147 (296)
                      .+++|+|++|++|..+++.+...|++|+++.++..+.    +.+.+.   +  +.. ..+..+.   +.+.+.....++|
T Consensus       141 ~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~----~~~~~~---g--~~~-~~~~~~~~~~~~~~~~~~~~~~d  210 (325)
T TIGR02824       141 ETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKC----AACEAL---G--ADI-AINYREEDFVEVVKAETGGKGVD  210 (325)
T ss_pred             CEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHHc---C--CcE-EEecCchhHHHHHHHHcCCCCeE
Confidence            7899999999999999999999999999887643222    122221   1  111 1222222   2333333334699


Q ss_pred             EEEEccc
Q 022471          148 AVMHFAA  154 (296)
Q Consensus       148 ~vi~~Ag  154 (296)
                      ++++++|
T Consensus       211 ~~i~~~~  217 (325)
T TIGR02824       211 VILDIVG  217 (325)
T ss_pred             EEEECCc
Confidence            9999987

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=96.25  E-value=0.032  Score=51.59  Aligned_cols=72  Identities=19%  Similarity=0.250  Sum_probs=53.6

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +.|+|+|+|+ |..|..+++++.+.|++|++++.++.....  ..        .. .++..|..|.+.+.+++++.++|.
T Consensus        11 ~~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~--~~--------ad-~~~~~~~~d~~~l~~~~~~~~id~   78 (395)
T PRK09288         11 SATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAM--QV--------AH-RSHVIDMLDGDALRAVIEREKPDY   78 (395)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchH--Hh--------hh-heEECCCCCHHHHHHHHHHhCCCE
Confidence            3379999986 689999999999999999999865432111  00        01 245678889999999887778999


Q ss_pred             EEEc
Q 022471          149 VMHF  152 (296)
Q Consensus       149 vi~~  152 (296)
                      |+-.
T Consensus        79 vi~~   82 (395)
T PRK09288         79 IVPE   82 (395)
T ss_pred             EEEe
Confidence            8864

>PRK07411 hypothetical protein; Validated

Probab=96.25  E-value=0.063  Score=49.71  Aligned_cols=79  Identities=23%  Similarity=0.262  Sum_probs=51.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCc-------------------chhhhhhhhhCCCCCceEEEEcc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGN-------------------IGAVKVLQELFPEPGRLQFIYAD  130 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~D  130 (296)
                      .+|+|.|+ ||+|.++++.|+..|. +++++|...-..                   +.+.+.++++.+. .+++.+...
T Consensus        39 ~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~-v~v~~~~~~  116 (390)
T PRK07411         39 ASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPY-CQVDLYETR  116 (390)
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCC-CeEEEEecc
Confidence            78999985 8999999999999997 677776432111                   1122333333332 456666666


Q ss_pred             CCCHHHHHHHhhcCCCcEEEEccc
Q 022471          131 LGDAKAVNKFFSENAFDAVMHFAA  154 (296)
Q Consensus       131 l~d~~~v~~~~~~~~~D~vi~~Ag  154 (296)
                      ++. +...+++  .++|+||.+..
T Consensus       117 ~~~-~~~~~~~--~~~D~Vvd~~d  137 (390)
T PRK07411        117 LSS-ENALDIL--APYDVVVDGTD  137 (390)
T ss_pred             cCH-HhHHHHH--hCCCEEEECCC
Confidence            654 3455666  56899998764

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.25  E-value=0.0086  Score=56.30  Aligned_cols=34  Identities=21%  Similarity=0.349  Sum_probs=31.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      |+|.|.||+|.+|..+++.|.+.|++|++++|+.
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~   34 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDP   34 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECCh
Confidence            4799999999999999999999999999999764

>PRK04148 hypothetical protein; Provisional

Probab=96.24  E-value=0.015  Score=45.26  Aligned_cols=54  Identities=17%  Similarity=0.192  Sum_probs=41.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHH
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK  135 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~  135 (296)
                      +++++.|.+  -|.++++.|.+.|++|+++|.++..    .+.+++     ..+.++.+|+.+++
T Consensus        18 ~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~a----V~~a~~-----~~~~~v~dDlf~p~   71 (134)
T PRK04148         18 KKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKA----VEKAKK-----LGLNAFVDDLFNPN   71 (134)
T ss_pred             CEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHH----HHHHHH-----hCCeEEECcCCCCC
Confidence            689999964  8999999999999999999976543    222222     34678899998764

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.23  E-value=0.016  Score=51.11  Aligned_cols=33  Identities=30%  Similarity=0.446  Sum_probs=30.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEec
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r  102 (296)
                      +|+|+|.|++|-+|+.++..|+++|++|+++.|
T Consensus       159 Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~  191 (283)
T PRK14192        159 GKHAVVVGRSAILGKPMAMMLLNANATVTICHS  191 (283)
T ss_pred             CCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeC
Confidence            389999999999999999999999999988864

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.20  E-value=0.0093  Score=56.71  Aligned_cols=33  Identities=21%  Similarity=0.303  Sum_probs=30.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      ++++|+|+ |++|++++..|++.|++|++.+|+.
T Consensus       333 k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~  365 (477)
T PRK09310        333 QHVAIVGA-GGAAKAIATTLARAGAELLIFNRTK  365 (477)
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            89999996 8999999999999999999888654

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.20  E-value=0.016  Score=51.32  Aligned_cols=76  Identities=20%  Similarity=0.166  Sum_probs=48.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH-HHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA-KAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~D~v  149 (296)
                      .+++|+|++|++|..+++.+...|++|++++++..+.    +.+.+.   +. -.++..+-.+. +.+.+.....++|++
T Consensus       146 ~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~----~~~~~~---g~-~~~~~~~~~~~~~~~~~~~~~~~~d~v  217 (328)
T cd08268         146 DSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKR----DALLAL---GA-AHVIVTDEEDLVAEVLRITGGKGVDVV  217 (328)
T ss_pred             CEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHH----HHHHHc---CC-CEEEecCCccHHHHHHHHhCCCCceEE
Confidence            6899999999999999999999999999987643222    122221   11 12222222222 233343333469999


Q ss_pred             EEccc
Q 022471          150 MHFAA  154 (296)
Q Consensus       150 i~~Ag  154 (296)
                      +++++
T Consensus       218 i~~~~  222 (328)
T cd08268         218 FDPVG  222 (328)
T ss_pred             EECCc
Confidence            99987

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=96.17  E-value=0.064  Score=47.95  Aligned_cols=75  Identities=21%  Similarity=0.143  Sum_probs=46.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH-HHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA-KAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~D~v  149 (296)
                      .+++|.|++|.+|..+++.+.+.|.+|+++++++.+.    +.++++.   .. ..+..+-.+. +.+.+... .++|.+
T Consensus       141 ~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~----~~~~~~g---~~-~v~~~~~~~~~~~~~~~~~-~~vd~v  211 (329)
T cd08250         141 ETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKA----EFLKSLG---CD-RPINYKTEDLGEVLKKEYP-KGVDVV  211 (329)
T ss_pred             CEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHH----HHHHHcC---Cc-eEEeCCCccHHHHHHHhcC-CCCeEE
Confidence            7899999999999999998888999998887644322    2222221   11 1122221121 23333322 469999


Q ss_pred             EEccc
Q 022471          150 MHFAA  154 (296)
Q Consensus       150 i~~Ag  154 (296)
                      +++.|
T Consensus       212 ~~~~g  216 (329)
T cd08250         212 YESVG  216 (329)
T ss_pred             EECCc
Confidence            99876

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.16  E-value=0.017  Score=52.11  Aligned_cols=73  Identities=19%  Similarity=0.204  Sum_probs=46.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCe-EEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC--HHHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD--AKAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~D  147 (296)
                      .+|+|+|+ |++|..+++.+...|++ |+++++++.+.    +.++++   +.. .+  .|..+  .+.+.++....++|
T Consensus       165 ~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~----~~~~~~---ga~-~~--i~~~~~~~~~~~~~~~~~~~d  233 (339)
T cd08239         165 DTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERL----ELAKAL---GAD-FV--INSGQDDVQEIRELTSGAGAD  233 (339)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH----HHHHHh---CCC-EE--EcCCcchHHHHHHHhCCCCCC
Confidence            79999986 99999999999889998 88877543322    222222   111 11  23332  33444444334799


Q ss_pred             EEEEccc
Q 022471          148 AVMHFAA  154 (296)
Q Consensus       148 ~vi~~Ag  154 (296)
                      ++|.+.|
T Consensus       234 ~vid~~g  240 (339)
T cd08239         234 VAIECSG  240 (339)
T ss_pred             EEEECCC
Confidence            9999987

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.14  E-value=0.013  Score=54.90  Aligned_cols=71  Identities=18%  Similarity=0.243  Sum_probs=47.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +++|+|.|+ |.+|..+++.|...|+ +|++++|+..+.....   +..   +.       ++.+.+++.+.+  .+.|+
T Consensus       182 ~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la---~~~---g~-------~~~~~~~~~~~l--~~aDv  245 (423)
T PRK00045        182 GKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELA---EEF---GG-------EAIPLDELPEAL--AEADI  245 (423)
T ss_pred             CCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHH---HHc---CC-------cEeeHHHHHHHh--ccCCE
Confidence            389999986 9999999999999997 7888887543322222   221   11       222334555556  46899


Q ss_pred             EEEccccc
Q 022471          149 VMHFAAVA  156 (296)
Q Consensus       149 vi~~Ag~~  156 (296)
                      ||.+.+..
T Consensus       246 VI~aT~s~  253 (423)
T PRK00045        246 VISSTGAP  253 (423)
T ss_pred             EEECCCCC
Confidence            99887643

>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively

Probab=96.13  E-value=0.03  Score=49.51  Aligned_cols=30  Identities=33%  Similarity=0.505  Sum_probs=25.5

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCC-eEEEEec
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSY-RVTIVDN  102 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r  102 (296)
                      +|+|.|+ |++|.++++.|+..|. +++++|.
T Consensus         1 kVLIvGa-GGLGs~vA~~La~aGVg~ItlvD~   31 (307)
T cd01486           1 KCLLLGA-GTLGCNVARNLLGWGVRHITFVDS   31 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEECC
Confidence            4888885 8999999999999997 6777763

This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.12  E-value=0.037  Score=49.04  Aligned_cols=43  Identities=16%  Similarity=0.178  Sum_probs=35.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhh
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKV  113 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~  113 (296)
                      +++|.|.|+ |.+|..+|..|+..|++|++.++++...+...+.
T Consensus         5 ~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~   47 (286)
T PRK07819          5 IQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATAGRNR   47 (286)
T ss_pred             ccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHH
Confidence            368999986 9999999999999999999999877665554433

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.10  E-value=0.014  Score=54.66  Aligned_cols=70  Identities=19%  Similarity=0.305  Sum_probs=47.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +++|+|.|+ |.+|..+++.|.+.| .+|++++|+..+..+.   .+..   +.  ..+     +.+++.+.+  .+.|+
T Consensus       180 ~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~l---a~~~---g~--~~i-----~~~~l~~~l--~~aDv  243 (417)
T TIGR01035       180 GKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDL---AKEL---GG--EAV-----KFEDLEEYL--AEADI  243 (417)
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH---HHHc---CC--eEe-----eHHHHHHHH--hhCCE
Confidence            389999996 999999999999999 6899998754332222   2221   11  111     224555666  46899


Q ss_pred             EEEcccc
Q 022471          149 VMHFAAV  155 (296)
Q Consensus       149 vi~~Ag~  155 (296)
                      ||.+.+.
T Consensus       244 Vi~aT~s  250 (417)
T TIGR01035       244 VISSTGA  250 (417)
T ss_pred             EEECCCC
Confidence            9998764

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK12767 carbamoyl phosphate synthase-like protein; Provisional

Probab=96.05  E-value=0.024  Score=50.95  Aligned_cols=72  Identities=14%  Similarity=0.147  Sum_probs=46.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC---HHHHHHHhhcC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD---AKAVNKFFSEN  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d---~~~v~~~~~~~  144 (296)
                      |++|||||+++.+  .+++.|.+.|  ++|++++.++....  ...        ....+..-+..+   .+.+.+++++.
T Consensus         1 ~~~vLv~g~~~~~--~~~~~l~~~~~g~~vi~~d~~~~~~~--~~~--------~d~~~~~p~~~~~~~~~~l~~~~~~~   68 (326)
T PRK12767          1 MMNILVTSAGRRV--QLVKALKKSLLKGRVIGADISELAPA--LYF--------ADKFYVVPKVTDPNYIDRLLDICKKE   68 (326)
T ss_pred             CceEEEecCCccH--HHHHHHHHhccCCEEEEECCCCcchh--hHh--------ccCcEecCCCCChhHHHHHHHHHHHh
Confidence            6899999998887  8899999994  99999986532211  111        111111112233   35566666667


Q ss_pred             CCcEEEEcc
Q 022471          145 AFDAVMHFA  153 (296)
Q Consensus       145 ~~D~vi~~A  153 (296)
                      ++|+|+-+.
T Consensus        69 ~id~ii~~~   77 (326)
T PRK12767         69 KIDLLIPLI   77 (326)
T ss_pred             CCCEEEECC
Confidence            899998653

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=96.03  E-value=0.023  Score=50.66  Aligned_cols=74  Identities=11%  Similarity=0.105  Sum_probs=48.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC---HHHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD---AKAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d---~~~v~~~~~~~~~D  147 (296)
                      .+|+|.|++|.+|..+++.+.+.|++|+++.++....    +.+.+.   +.. .++  +..+   .+.+.++....++|
T Consensus       141 ~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~----~~~~~~---g~~-~~~--~~~~~~~~~~i~~~~~~~~~d  210 (324)
T cd08292         141 QWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGV----AELRAL---GIG-PVV--STEQPGWQDKVREAAGGAPIS  210 (324)
T ss_pred             CEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHH----HHHHhc---CCC-EEE--cCCCchHHHHHHHHhCCCCCc
Confidence            7899999999999999999999999998887543322    222222   111 122  2222   23344444335799


Q ss_pred             EEEEccc
Q 022471          148 AVMHFAA  154 (296)
Q Consensus       148 ~vi~~Ag  154 (296)
                      +++++.|
T Consensus       211 ~v~d~~g  217 (324)
T cd08292         211 VALDSVG  217 (324)
T ss_pred             EEEECCC
Confidence            9999887

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.99  E-value=0.015  Score=56.53  Aligned_cols=71  Identities=14%  Similarity=0.239  Sum_probs=53.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      -+++|.| .|-+|++++++|.++|++|++++.+++..    +.+++     .....+.+|.+|++.++++-- .+.|.++
T Consensus       418 ~hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~----~~~~~-----~g~~~i~GD~~~~~~L~~a~i-~~a~~vi  486 (558)
T PRK10669        418 NHALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTRV----DELRE-----RGIRAVLGNAANEEIMQLAHL-DCARWLL  486 (558)
T ss_pred             CCEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHH----HHHHH-----CCCeEEEcCCCCHHHHHhcCc-cccCEEE
Confidence            4688888 59999999999999999999998654322    22222     357788999999988887532 4678766


Q ss_pred             Ec
Q 022471          151 HF  152 (296)
Q Consensus       151 ~~  152 (296)
                      -+
T Consensus       487 v~  488 (558)
T PRK10669        487 LT  488 (558)
T ss_pred             EE
Confidence            44

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=95.99  E-value=0.037  Score=50.95  Aligned_cols=67  Identities=22%  Similarity=0.352  Sum_probs=50.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      |++|+|.|| |.+|+.+++++.+.|++|++++.++....  ..    .     .-.++..|..|.+.+.++++  .+|+|
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa--~~----~-----ad~~~~~~~~D~~~l~~~a~--~~dvi   67 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPA--AQ----V-----ADEVIVADYDDVAALRELAE--QCDVI   67 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCch--hH----h-----CceEEecCCCCHHHHHHHHh--cCCEE
Confidence            588999998 79999999999999999999986443211  11    0     11345678899999999884  67876


Q ss_pred             E
Q 022471          150 M  150 (296)
Q Consensus       150 i  150 (296)
                      .
T Consensus        68 t   68 (372)
T PRK06019         68 T   68 (372)
T ss_pred             E
Confidence            4

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=95.99  E-value=0.018  Score=39.71  Aligned_cols=32  Identities=25%  Similarity=0.199  Sum_probs=22.4

Q ss_pred             CccEEEEEcCCChhhHH--HHHHHHhCCCeEEEEe
Q 022471           69 GVTHVLVTGGAGYIGSH--AALRLLKDSYRVTIVD  101 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~--la~~L~~~G~~V~~~~  101 (296)
                      +.|+|||+|+|+|.|.+  |+..+ ..|++.+.+.
T Consensus        38 GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~   71 (78)
T PF12242_consen   38 GPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVS   71 (78)
T ss_dssp             S-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE
T ss_pred             CCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEe
Confidence            34899999999999999  55555 6678877765

>PRK07877 hypothetical protein; Provisional

Probab=95.98  E-value=0.077  Score=52.78  Aligned_cols=102  Identities=16%  Similarity=0.207  Sum_probs=66.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCC---Ccc---------------hhhhhhhhhCCCCCceEEEEcc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSR---GNI---------------GAVKVLQELFPEPGRLQFIYAD  130 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~---~~~---------------~~~~~~~~~~~~~~~~~~~~~D  130 (296)
                      .+|+|.|. | +|++++..|+..|.  +++++|...-   +..               .+.+.+.++.+. .+++.+...
T Consensus       108 ~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~-i~v~~~~~~  184 (722)
T PRK07877        108 LRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPY-LPVEVFTDG  184 (722)
T ss_pred             CCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCC-CEEEEEecc
Confidence            79999999 6 99999999999994  8888875321   111               122333333332 467777777


Q ss_pred             CCCHHHHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       131 l~d~~~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      ++ .+.+.+++  .++|+||.|.-                 |+..=..+-++|.+.+. -+|+.++
T Consensus       185 i~-~~n~~~~l--~~~DlVvD~~D-----------------~~~~R~~ln~~a~~~~i-P~i~~~~  229 (722)
T PRK07877        185 LT-EDNVDAFL--DGLDVVVEECD-----------------SLDVKVLLREAARARRI-PVLMATS  229 (722)
T ss_pred             CC-HHHHHHHh--cCCCEEEECCC-----------------CHHHHHHHHHHHHHcCC-CEEEEcC
Confidence            76 67788888  57999998762                 12222234466777764 5666664

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.97  E-value=0.03  Score=49.80  Aligned_cols=74  Identities=18%  Similarity=0.117  Sum_probs=48.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH---HHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~D  147 (296)
                      .+++|+|++|.+|..+++.+...|++|++++++..+.+    .+++.   +  +.. ..|..+.   +.+.+.....++|
T Consensus       144 ~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~----~~~~~---g--~~~-~~~~~~~~~~~~~~~~~~~~~~d  213 (324)
T cd08244         144 DVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTA----LVRAL---G--ADV-AVDYTRPDWPDQVREALGGGGVT  213 (324)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHHc---C--CCE-EEecCCccHHHHHHHHcCCCCce
Confidence            78999999999999999999999999988875443322    22222   1  111 1232332   3334433334699


Q ss_pred             EEEEccc
Q 022471          148 AVMHFAA  154 (296)
Q Consensus       148 ~vi~~Ag  154 (296)
                      .++++.|
T Consensus       214 ~vl~~~g  220 (324)
T cd08244         214 VVLDGVG  220 (324)
T ss_pred             EEEECCC
Confidence            9999976

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]

Probab=95.96  E-value=0.028  Score=49.46  Aligned_cols=70  Identities=20%  Similarity=0.268  Sum_probs=54.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      ++|++.| ||-+|++++-++.+-|.+|+.+||-.....  -..         .-..+..|..|.+.++.++++.++|.+|
T Consensus        13 ~kvmLLG-SGELGKEvaIe~QRLG~eViAVDrY~~APA--mqV---------Ahrs~Vi~MlD~~al~avv~rekPd~IV   80 (394)
T COG0027          13 TKVMLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAPA--MQV---------AHRSYVIDMLDGDALRAVVEREKPDYIV   80 (394)
T ss_pred             eEEEEec-CCccchHHHHHHHhcCCEEEEecCcCCChh--hhh---------hhheeeeeccCHHHHHHHHHhhCCCeee
Confidence            6788888 799999999999999999999997543221  110         0123468999999999999988899887


Q ss_pred             Ec
Q 022471          151 HF  152 (296)
Q Consensus       151 ~~  152 (296)
                      --
T Consensus        81 pE   82 (394)
T COG0027          81 PE   82 (394)
T ss_pred             eh
Confidence            53

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=95.94  E-value=0.13  Score=46.77  Aligned_cols=25  Identities=20%  Similarity=0.331  Sum_probs=23.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY   95 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~   95 (296)
                      ++|.|.||||.+|.++++.|.+++|
T Consensus         8 ~kVaVvGAtG~vG~eLlrlL~~~~h   32 (344)
T PLN02383          8 PSVAIVGVTGAVGQEFLSVLTDRDF   32 (344)
T ss_pred             CeEEEEcCCChHHHHHHHHHHhCCC
Confidence            6899999999999999999999887

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=95.91  E-value=0.019  Score=51.49  Aligned_cols=71  Identities=24%  Similarity=0.283  Sum_probs=47.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +++|+|.|+ |.+|..+++.|...| .+|++++|+..+..+..   ++.   +.       ++.+.+++.+.+  .+.|+
T Consensus       178 ~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la---~~~---g~-------~~~~~~~~~~~l--~~aDv  241 (311)
T cd05213         178 GKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELA---KEL---GG-------NAVPLDELLELL--NEADV  241 (311)
T ss_pred             CCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH---HHc---CC-------eEEeHHHHHHHH--hcCCE
Confidence            389999997 999999999999876 57888887543332222   221   11       122334566666  46899


Q ss_pred             EEEccccc
Q 022471          149 VMHFAAVA  156 (296)
Q Consensus       149 vi~~Ag~~  156 (296)
                      ||.+.+..
T Consensus       242 Vi~at~~~  249 (311)
T cd05213         242 VISATGAP  249 (311)
T ss_pred             EEECCCCC
Confidence            99988743

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=95.90  E-value=0.024  Score=50.67  Aligned_cols=74  Identities=18%  Similarity=0.083  Sum_probs=47.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH---HHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~D  147 (296)
                      .+|+|.|++|.+|..+++.+.+.|++|++++++..+.+    .+++..  +. -.++  |..+.   +.+.+... .++|
T Consensus       147 ~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~----~~~~~~--g~-~~~~--~~~~~~~~~~v~~~~~-~~~d  216 (329)
T cd05288         147 ETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCR----WLVEEL--GF-DAAI--NYKTPDLAEALKEAAP-DGID  216 (329)
T ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH----HHHhhc--CC-ceEE--ecCChhHHHHHHHhcc-CCce
Confidence            78999999999999999999999999988875443222    222211  11 1111  22222   23333332 5799


Q ss_pred             EEEEccc
Q 022471          148 AVMHFAA  154 (296)
Q Consensus       148 ~vi~~Ag  154 (296)
                      ++++++|
T Consensus       217 ~vi~~~g  223 (329)
T cd05288         217 VYFDNVG  223 (329)
T ss_pred             EEEEcch
Confidence            9999886

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.90  E-value=0.029  Score=49.49  Aligned_cols=76  Identities=21%  Similarity=0.139  Sum_probs=48.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC-HHHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~D~v  149 (296)
                      .+|+|+|++|.+|..+++.+...|++|+.++++....+    .+.+.   +.. ..+..+-.+ .+.+.+.....++|.+
T Consensus       141 ~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~----~~~~~---g~~-~~~~~~~~~~~~~i~~~~~~~~~d~v  212 (323)
T cd08241         141 ETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLA----LARAL---GAD-HVIDYRDPDLRERVKALTGGRGVDVV  212 (323)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHH----HHHHc---CCc-eeeecCCccHHHHHHHHcCCCCcEEE
Confidence            78999999999999999999999999998876543222    22222   111 112222112 2334444433569999


Q ss_pred             EEccc
Q 022471          150 MHFAA  154 (296)
Q Consensus       150 i~~Ag  154 (296)
                      +++.|
T Consensus       213 ~~~~g  217 (323)
T cd08241         213 YDPVG  217 (323)
T ss_pred             EECcc
Confidence            99886

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=95.89  E-value=0.18  Score=43.62  Aligned_cols=73  Identities=16%  Similarity=0.237  Sum_probs=55.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      |++|||.|||+ =|+.+++.|.+.|+.|++..-.....           .....+....+-+.+.+++.+++.+.++++|
T Consensus         2 ~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~g~-----------~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~V   69 (248)
T PRK08057          2 MPRILLLGGTS-EARALARALAAAGVDIVLSLAGRTGG-----------PADLPGPVRVGGFGGAEGLAAYLREEGIDLV   69 (248)
T ss_pred             CceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCCC-----------cccCCceEEECCCCCHHHHHHHHHHCCCCEE
Confidence            47899999875 69999999999999887754322111           0113556667888899999999998899999


Q ss_pred             EEccc
Q 022471          150 MHFAA  154 (296)
Q Consensus       150 i~~Ag  154 (296)
                      |...-
T Consensus        70 IDATH   74 (248)
T PRK08057         70 IDATH   74 (248)
T ss_pred             EECCC
Confidence            98753

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=95.88  E-value=0.028  Score=50.97  Aligned_cols=72  Identities=17%  Similarity=0.273  Sum_probs=44.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-CCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~  148 (296)
                      ++|+|+|+ |++|...++.+...|+ +|+++++++.+.    +.++++   +.. ..  .|..+. ++.+..+. +++|+
T Consensus       171 ~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~----~~a~~l---Ga~-~v--i~~~~~-~~~~~~~~~g~~D~  238 (343)
T PRK09880        171 KRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSL----SLAREM---GAD-KL--VNPQND-DLDHYKAEKGYFDV  238 (343)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHH----HHHHHc---CCc-EE--ecCCcc-cHHHHhccCCCCCE
Confidence            78999986 9999999988888898 587787654332    222332   111 11  233221 23333322 45999


Q ss_pred             EEEccc
Q 022471          149 VMHFAA  154 (296)
Q Consensus       149 vi~~Ag  154 (296)
                      +|.++|
T Consensus       239 vid~~G  244 (343)
T PRK09880        239 SFEVSG  244 (343)
T ss_pred             EEECCC
Confidence            999987

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.87  E-value=0.041  Score=48.50  Aligned_cols=55  Identities=20%  Similarity=0.306  Sum_probs=44.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +|+|+|+|+++-+|+.++..|.++|++|+++.+..                              .++.+.+  .+.|+|
T Consensus       158 Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t------------------------------~~l~~~~--~~ADIV  205 (286)
T PRK14175        158 GKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS------------------------------KDMASYL--KDADVI  205 (286)
T ss_pred             CCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc------------------------------hhHHHHH--hhCCEE
Confidence            39999999999999999999999999999886421                              1344455  467999


Q ss_pred             EEccccc
Q 022471          150 MHFAAVA  156 (296)
Q Consensus       150 i~~Ag~~  156 (296)
                      |...|..
T Consensus       206 IsAvg~p  212 (286)
T PRK14175        206 VSAVGKP  212 (286)
T ss_pred             EECCCCC
Confidence            9988864

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=95.84  E-value=0.13  Score=49.06  Aligned_cols=103  Identities=20%  Similarity=0.193  Sum_probs=62.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC--------------H--
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD--------------A--  134 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--------------~--  134 (296)
                      .+|+|+|+ |.+|...++.+...|++|+++|+++.+.+    ..+++   +  ..++..|..+              .  
T Consensus       166 ~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle----~aesl---G--A~~v~i~~~e~~~~~~gya~~~s~~~~  235 (509)
T PRK09424        166 AKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAE----QVESM---G--AEFLELDFEEEGGSGDGYAKVMSEEFI  235 (509)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHHc---C--CeEEEeccccccccccchhhhcchhHH
Confidence            79999995 99999999999999999999987654333    22222   1  2222222211              1  


Q ss_pred             HHHHHHhhc--CCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          135 KAVNKFFSE--NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       135 ~~v~~~~~~--~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      +...+.+.+  .++|++|.+++....+.    +       ..-+...++.|++  .++||.++.
T Consensus       236 ~~~~~~~~~~~~gaDVVIetag~pg~~a----P-------~lit~~~v~~mkp--GgvIVdvg~  286 (509)
T PRK09424        236 KAEMALFAEQAKEVDIIITTALIPGKPA----P-------KLITAEMVASMKP--GSVIVDLAA  286 (509)
T ss_pred             HHHHHHHHhccCCCCEEEECCCCCcccC----c-------chHHHHHHHhcCC--CCEEEEEcc
Confidence            122233332  46999999999754211    1       0113445666653  357888876

>cd01490 Ube1_repeat2 Ubiquitin activating enzyme (E1), repeat 2

Probab=95.81  E-value=0.14  Score=47.93  Aligned_cols=31  Identities=26%  Similarity=0.332  Sum_probs=27.0

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCC------eEEEEecC
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSY------RVTIVDNL  103 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~------~V~~~~r~  103 (296)
                      +|+|.| .||||.++++.|+..|.      +++++|.+
T Consensus         1 kVlvVG-aGGlGcE~lKnLal~Gv~~g~~G~I~IvD~D   37 (435)
T cd01490           1 KVFLVG-AGAIGCELLKNFALMGVGTGESGEITVTDMD   37 (435)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCcCCCCeEEEECCC
Confidence            488898 59999999999999998      88888754

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the second repeat of Ub-E1.

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=95.81  E-value=0.025  Score=52.07  Aligned_cols=35  Identities=29%  Similarity=0.471  Sum_probs=32.1

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecC
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~  103 (296)
                      .+++|.|.||.|.+|..+++.|.++|++|++++|+
T Consensus        97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~  131 (374)
T PRK11199         97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQD  131 (374)
T ss_pred             ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCC
Confidence            34789999999999999999999999999999864

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=95.77  E-value=0.016  Score=48.42  Aligned_cols=36  Identities=33%  Similarity=0.362  Sum_probs=28.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG  106 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~  106 (296)
                      ||++.| ||+|.||+.++++|++.||+|++..|+..+
T Consensus         1 m~~~~i-~GtGniG~alA~~~a~ag~eV~igs~r~~~   36 (211)
T COG2085           1 MMIIAI-IGTGNIGSALALRLAKAGHEVIIGSSRGPK   36 (211)
T ss_pred             CcEEEE-eccChHHHHHHHHHHhCCCeEEEecCCChh
Confidence            355554 558999999999999999999998665443

>PRK14852 hypothetical protein; Provisional

Probab=95.76  E-value=0.16  Score=51.93  Aligned_cols=107  Identities=11%  Similarity=0.121  Sum_probs=65.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCC-------------------cchhhhhhhhhCCCCCceEEEEcc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRG-------------------NIGAVKVLQELFPEPGRLQFIYAD  130 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~D  130 (296)
                      .+|+|.| .||+|++++..|+..|. +++++|.+.-.                   .+.+.+.+.++.+. .+++.+...
T Consensus       333 srVlVvG-lGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~-v~I~~~~~~  410 (989)
T PRK14852        333 SRVAIAG-LGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPF-LDIRSFPEG  410 (989)
T ss_pred             CcEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCC-CeEEEEecC
Confidence            7899999 69999999999999997 67777633211                   01122333343332 456666666


Q ss_pred             CCCHHHHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccc
Q 022471          131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCA  198 (296)
Q Consensus       131 l~d~~~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~  198 (296)
                      + +.+.+.+++  .++|+||.+.-...               +..-..+.+.|.+.+. .+|+.++.+
T Consensus       411 I-~~en~~~fl--~~~DiVVDa~D~~~---------------~~~rr~l~~~c~~~~I-P~I~ag~~G  459 (989)
T PRK14852        411 V-AAETIDAFL--KDVDLLVDGIDFFA---------------LDIRRRLFNRALELGI-PVITAGPLG  459 (989)
T ss_pred             C-CHHHHHHHh--hCCCEEEECCCCcc---------------HHHHHHHHHHHHHcCC-CEEEeeccc
Confidence            6 456778888  57999997652110               1112345556677765 566666533

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=95.75  E-value=0.05  Score=50.08  Aligned_cols=70  Identities=17%  Similarity=0.256  Sum_probs=52.7

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEEE
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMH  151 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi~  151 (296)
                      +|+|.|+ |..|..+++++.+.|++|++++.++....  ..    .    .. .++..|..|.+.+.+++++.++|+|+-
T Consensus         1 kililG~-g~~~~~l~~aa~~~G~~v~~~d~~~~~~~--~~----~----ad-~~~~~~~~d~~~l~~~~~~~~id~v~~   68 (380)
T TIGR01142         1 RVLLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPA--MQ----V----AH-RSYVINMLDGDALRAVIEREKPDYIVP   68 (380)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCch--hh----h----Cc-eEEEcCCCCHHHHHHHHHHhCCCEEEe
Confidence            5899994 89999999999999999999987543211  11    0    11 345678889999999987778999985


Q ss_pred             cc
Q 022471          152 FA  153 (296)
Q Consensus       152 ~A  153 (296)
                      ..
T Consensus        69 ~~   70 (380)
T TIGR01142        69 EI   70 (380)
T ss_pred             cc
Confidence            43

This enzyme is an alternative to PurN (TIGR00639)

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=95.74  E-value=0.04  Score=49.35  Aligned_cols=76  Identities=11%  Similarity=0.099  Sum_probs=46.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC-HHHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~D~v  149 (296)
                      ..++++||+|++|..+++.+...|++|+++++++.+.    +.++++   +.. +++..+-.+ .+.+.++....++|++
T Consensus       145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~----~~~~~~---g~~-~~i~~~~~~~~~~v~~~~~~~~~d~v  216 (324)
T cd08291         145 KAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQV----DLLKKI---GAE-YVLNSSDPDFLEDLKELIAKLNATIF  216 (324)
T ss_pred             cEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHHc---CCc-EEEECCCccHHHHHHHHhCCCCCcEE
Confidence            4555569999999999988888899998887644322    222222   111 222222112 2344444433479999


Q ss_pred             EEccc
Q 022471          150 MHFAA  154 (296)
Q Consensus       150 i~~Ag  154 (296)
                      |++.|
T Consensus       217 id~~g  221 (324)
T cd08291         217 FDAVG  221 (324)
T ss_pred             EECCC
Confidence            99887

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.70  E-value=0.021  Score=51.30  Aligned_cols=37  Identities=24%  Similarity=0.250  Sum_probs=32.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNI  108 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~  108 (296)
                      ++|.|.|+ |-+|..++..|+..|++|++.++++...+
T Consensus         8 ~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~   44 (321)
T PRK07066          8 KTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEA   44 (321)
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHH
Confidence            67989985 99999999999999999999998664433

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=95.70  E-value=0.034  Score=50.67  Aligned_cols=74  Identities=18%  Similarity=0.114  Sum_probs=46.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCe-EEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH---HHHHHHhhcCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENA  145 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~  145 (296)
                      +++|+|.|+ |.+|...++.+...|++ |++++++..+.+    .++++   +.. .+  .|..+.   +.+.++....+
T Consensus       177 g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~----~~~~~---Ga~-~~--i~~~~~~~~~~i~~~~~~~g  245 (358)
T TIGR03451       177 GDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLE----WAREF---GAT-HT--VNSSGTDPVEAIRALTGGFG  245 (358)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH----HHHHc---CCc-eE--EcCCCcCHHHHHHHHhCCCC
Confidence            378999985 99999999988888985 887775443322    22222   111 11  233332   33444443346


Q ss_pred             CcEEEEccc
Q 022471          146 FDAVMHFAA  154 (296)
Q Consensus       146 ~D~vi~~Ag  154 (296)
                      +|++|.+.|
T Consensus       246 ~d~vid~~g  254 (358)
T TIGR03451       246 ADVVIDAVG  254 (358)
T ss_pred             CCEEEECCC
Confidence            999999987

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=95.68  E-value=0.062  Score=47.56  Aligned_cols=76  Identities=18%  Similarity=0.331  Sum_probs=48.9

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCc-------------------chhhhhhhhhCCCCCceEEEEccC
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGN-------------------IGAVKVLQELFPEPGRLQFIYADL  131 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~Dl  131 (296)
                      +|+|.| .||+|.++++.|+..|. +++++|.+.-..                   +.+.+.++++.+. .+++.+..++
T Consensus         1 kVlVVG-aGGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~-v~I~~~~~~i   78 (291)
T cd01488           1 KILVIG-AGGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPG-VNVTPHFGKI   78 (291)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCC-CEEEEEeccc
Confidence            488888 59999999999999997 677776432110                   1112233333332 4566677777


Q ss_pred             CCHHHHHHHhhcCCCcEEEEcc
Q 022471          132 GDAKAVNKFFSENAFDAVMHFA  153 (296)
Q Consensus       132 ~d~~~v~~~~~~~~~D~vi~~A  153 (296)
                      .+.+  .+++  .++|+||.+.
T Consensus        79 ~~~~--~~f~--~~fdvVi~al   96 (291)
T cd01488          79 QDKD--EEFY--RQFNIIICGL   96 (291)
T ss_pred             Cchh--HHHh--cCCCEEEECC
Confidence            7542  3455  5689998764

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=95.66  E-value=0.12  Score=46.85  Aligned_cols=34  Identities=21%  Similarity=0.175  Sum_probs=30.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~  105 (296)
                      .+|+|.|+ |.+|..+++.+...|.+|+++++++.
T Consensus       168 ~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~  201 (349)
T TIGR03201       168 DLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPE  201 (349)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHH
Confidence            79999999 99999999999999999988876543

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PLN00203 glutamyl-tRNA reductase

Probab=95.66  E-value=0.026  Score=54.09  Aligned_cols=74  Identities=15%  Similarity=0.190  Sum_probs=48.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      .++|+|.|+ |.+|..+++.|...|+ +|+++.|+..+.....+.   . + +..+.     +...+++.+++  .+.|+
T Consensus       266 ~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~---~-~-g~~i~-----~~~~~dl~~al--~~aDV  332 (519)
T PLN00203        266 SARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREE---F-P-DVEII-----YKPLDEMLACA--AEADV  332 (519)
T ss_pred             CCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH---h-C-CCceE-----eecHhhHHHHH--hcCCE
Confidence            489999998 9999999999999997 688888765443322221   1 1 11111     12333455556  46899


Q ss_pred             EEEccccc
Q 022471          149 VMHFAAVA  156 (296)
Q Consensus       149 vi~~Ag~~  156 (296)
                      ||.+.+..
T Consensus       333 VIsAT~s~  340 (519)
T PLN00203        333 VFTSTSSE  340 (519)
T ss_pred             EEEccCCC
Confidence            99876543

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.59  E-value=0.041  Score=48.69  Aligned_cols=40  Identities=30%  Similarity=0.348  Sum_probs=33.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhh
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAV  111 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~  111 (296)
                      ++|.|.|+ |-+|..++..|++.|++|++++++....++..
T Consensus         4 ~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~   43 (287)
T PRK08293          4 KNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEALEKAK   43 (287)
T ss_pred             cEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHH
Confidence            67999985 99999999999999999999998765444443

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=95.57  E-value=0.044  Score=48.21  Aligned_cols=76  Identities=16%  Similarity=0.047  Sum_probs=47.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH-HHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA-KAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~D~v  149 (296)
                      .+|+|.|++|.+|..+++.+...|++|+++++++.+.    +.+.+.   +.. .++..+-.+. +.+.+.....++|.+
T Consensus       138 ~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~----~~~~~~---g~~-~~~~~~~~~~~~~~~~~~~~~~~d~v  209 (320)
T cd05286         138 DTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKA----ELARAA---GAD-HVINYRDEDFVERVREITGGRGVDVV  209 (320)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHH----HHHHHC---CCC-EEEeCCchhHHHHHHHHcCCCCeeEE
Confidence            7899999999999999999999999998887543322    222222   111 1222221111 233443333569999


Q ss_pred             EEccc
Q 022471          150 MHFAA  154 (296)
Q Consensus       150 i~~Ag  154 (296)
                      +++.+
T Consensus       210 l~~~~  214 (320)
T cd05286         210 YDGVG  214 (320)
T ss_pred             EECCC
Confidence            99876

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=95.56  E-value=0.18  Score=43.67  Aligned_cols=75  Identities=33%  Similarity=0.480  Sum_probs=53.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+|||.|||+ =|+.++..|.++|+ |++..-.+...     .+..  +.........+-+.+.+.+.+++.+.+++.||
T Consensus         1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~t~~g~-----~~~~--~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vI   71 (249)
T PF02571_consen    1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVATSYGG-----ELLK--PELPGLEVRVGRLGDEEGLAEFLRENGIDAVI   71 (249)
T ss_pred             CEEEEEechH-HHHHHHHHHHhcCC-EEEEEEhhhhH-----hhhc--cccCCceEEECCCCCHHHHHHHHHhCCCcEEE
Confidence            6899999975 59999999999998 55432111111     1110  11134567778888999999999989999999


Q ss_pred             Eccc
Q 022471          151 HFAA  154 (296)
Q Consensus       151 ~~Ag  154 (296)
                      ...-
T Consensus        72 DATH   75 (249)
T PF02571_consen   72 DATH   75 (249)
T ss_pred             ECCC
Confidence            8753

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=95.55  E-value=0.083  Score=51.82  Aligned_cols=72  Identities=14%  Similarity=0.233  Sum_probs=54.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      .+|+|.| .|-+|+.+++.|.++|+++++++.++...+    .+++     .....+.+|.+|++.++++=- .+.|.+|
T Consensus       401 ~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~----~~~~-----~g~~v~~GDat~~~~L~~agi-~~A~~vv  469 (601)
T PRK03659        401 PQVIIVG-FGRFGQVIGRLLMANKMRITVLERDISAVN----LMRK-----YGYKVYYGDATQLELLRAAGA-EKAEAIV  469 (601)
T ss_pred             CCEEEec-CchHHHHHHHHHHhCCCCEEEEECCHHHHH----HHHh-----CCCeEEEeeCCCHHHHHhcCC-ccCCEEE
Confidence            5788888 599999999999999999999986543322    2222     346788999999998887532 4688888


Q ss_pred             Ecc
Q 022471          151 HFA  153 (296)
Q Consensus       151 ~~A  153 (296)
                      -+-
T Consensus       470 ~~~  472 (601)
T PRK03659        470 ITC  472 (601)
T ss_pred             EEe
Confidence            654

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=95.54  E-value=0.1  Score=47.47  Aligned_cols=31  Identities=26%  Similarity=0.385  Sum_probs=26.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCC-CeEEEEe
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVD  101 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~  101 (296)
                      ++|.|+|++|.+|.++++.|.+++ .+++.+.
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~   32 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVV   32 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEE
Confidence            479999999999999999998876 5877764

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=95.53  E-value=0.17  Score=44.52  Aligned_cols=33  Identities=24%  Similarity=0.300  Sum_probs=28.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      ++|+|.| .|.||+.+++.|.++|+.|.+++++.
T Consensus         4 ~~v~IvG-~GliG~s~a~~l~~~g~~v~i~g~d~   36 (279)
T COG0287           4 MKVGIVG-LGLMGGSLARALKEAGLVVRIIGRDR   36 (279)
T ss_pred             cEEEEEC-CchHHHHHHHHHHHcCCeEEEEeecC
Confidence            5676766 89999999999999999998888654

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=95.49  E-value=0.12  Score=45.41  Aligned_cols=109  Identities=14%  Similarity=0.113  Sum_probs=66.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      ++|+|.||+|-+|+-+-+--.-.|+.|+..+-+.++-    ..++...+....+.+-. +..-.+.+++.+. .++|+-|
T Consensus       155 eTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv----~ll~~~~G~d~afNYK~-e~~~~~aL~r~~P-~GIDiYf  228 (343)
T KOG1196|consen  155 ETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKV----DLLKTKFGFDDAFNYKE-ESDLSAALKRCFP-EGIDIYF  228 (343)
T ss_pred             CEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhh----hhhHhccCCccceeccC-ccCHHHHHHHhCC-CcceEEE
Confidence            8999999999999976665555799998876433222    22333322212222211 1111234444443 5899999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCC
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEK  205 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~  205 (296)
                      -|.|-.                  ....++..|+.+  +||+.++-.+.|.....
T Consensus       229 eNVGG~------------------~lDavl~nM~~~--gri~~CG~ISqYN~~~~  263 (343)
T KOG1196|consen  229 ENVGGK------------------MLDAVLLNMNLH--GRIAVCGMISQYNLENP  263 (343)
T ss_pred             eccCcH------------------HHHHHHHhhhhc--cceEeeeeehhccccCC
Confidence            998832                  122356666665  58999999888865443

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=95.45  E-value=0.099  Score=47.80  Aligned_cols=72  Identities=18%  Similarity=0.181  Sum_probs=46.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      ++|+|.|+ |+||..+++.+...|++|++++.+..+.....   +++   +  +.. ..|..+.+.+.+..  +++|++|
T Consensus       185 ~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~---~~~---G--a~~-vi~~~~~~~~~~~~--~~~D~vi  252 (360)
T PLN02586        185 KHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAI---NRL---G--ADS-FLVSTDPEKMKAAI--GTMDYII  252 (360)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHH---HhC---C--CcE-EEcCCCHHHHHhhc--CCCCEEE
Confidence            78999775 99999999988889999988775443322221   121   1  111 12333444555544  4689999


Q ss_pred             Eccc
Q 022471          151 HFAA  154 (296)
Q Consensus       151 ~~Ag  154 (296)
                      .+.|
T Consensus       253 d~~g  256 (360)
T PLN02586        253 DTVS  256 (360)
T ss_pred             ECCC
Confidence            9887

>PRK14851 hypothetical protein; Provisional

Probab=95.45  E-value=0.3  Score=48.46  Aligned_cols=78  Identities=17%  Similarity=0.206  Sum_probs=52.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCC---Cc----------------chhhhhhhhhCCCCCceEEEEcc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSR---GN----------------IGAVKVLQELFPEPGRLQFIYAD  130 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~---~~----------------~~~~~~~~~~~~~~~~~~~~~~D  130 (296)
                      .+|+|.| .||+|++++..|+..|. +++++|.+.-   +.                +.+.+.+.++.+ ..+++.+...
T Consensus        44 ~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP-~~~I~~~~~~  121 (679)
T PRK14851         44 AKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINP-FLEITPFPAG  121 (679)
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCC-CCeEEEEecC
Confidence            7899999 69999999999999997 6777763211   10                011223333333 2567777777


Q ss_pred             CCCHHHHHHHhhcCCCcEEEEcc
Q 022471          131 LGDAKAVNKFFSENAFDAVMHFA  153 (296)
Q Consensus       131 l~d~~~v~~~~~~~~~D~vi~~A  153 (296)
                      ++ .+.+.+++  .++|+||.+.
T Consensus       122 i~-~~n~~~~l--~~~DvVid~~  141 (679)
T PRK14851        122 IN-ADNMDAFL--DGVDVVLDGL  141 (679)
T ss_pred             CC-hHHHHHHH--hCCCEEEECC
Confidence            75 55677788  5799999765

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.43  E-value=0.052  Score=48.24  Aligned_cols=74  Identities=9%  Similarity=0.036  Sum_probs=48.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH---HHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~D  147 (296)
                      .+|+|.|++|.+|..+++.+...|++|+++.++..+.    +.+++.   +.. .+  .|..+.   +.+.+.....++|
T Consensus       140 ~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~----~~~~~~---g~~-~~--~~~~~~~~~~~~~~~~~~~~~d  209 (323)
T cd05282         140 DWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQV----EELKAL---GAD-EV--IDSSPEDLAQRVKEATGGAGAR  209 (323)
T ss_pred             CEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHH----HHHHhc---CCC-EE--ecccchhHHHHHHHHhcCCCce
Confidence            7899999999999999999999999998887654332    222222   111 11  122222   3344443335799


Q ss_pred             EEEEccc
Q 022471          148 AVMHFAA  154 (296)
Q Consensus       148 ~vi~~Ag  154 (296)
                      +++++.|
T Consensus       210 ~vl~~~g  216 (323)
T cd05282         210 LALDAVG  216 (323)
T ss_pred             EEEECCC
Confidence            9999886

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=95.43  E-value=0.053  Score=41.84  Aligned_cols=30  Identities=23%  Similarity=0.274  Sum_probs=27.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEe
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVD  101 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~  101 (296)
                      ++|-|.|+ |-+|.+|++.|.+.|++|..+.
T Consensus        11 l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~   40 (127)
T PF10727_consen   11 LKIGIIGA-GRVGTALARALARAGHEVVGVY   40 (127)
T ss_dssp             -EEEEECT-SCCCCHHHHHHHHTTSEEEEES
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCCeEEEEE
Confidence            78999997 9999999999999999998875

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.40  E-value=0.0078  Score=53.33  Aligned_cols=40  Identities=23%  Similarity=0.314  Sum_probs=34.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhh
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAV  111 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~  111 (296)
                      ++|.|.|+ |-+|..+|..|+++|++|+++++++...+...
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~   41 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQ   41 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHH
Confidence            67999997 99999999999999999999998765544433

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=95.38  E-value=0.065  Score=37.50  Aligned_cols=33  Identities=36%  Similarity=0.577  Sum_probs=28.9

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~  105 (296)
                      +|+|.|| |.+|.++|..|.+.|.+|+++.+.+.
T Consensus         1 ~vvViGg-G~ig~E~A~~l~~~g~~vtli~~~~~   33 (80)
T PF00070_consen    1 RVVVIGG-GFIGIELAEALAELGKEVTLIERSDR   33 (80)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHTTSEEEEEESSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHhCcEEEEEeccch
Confidence            4778884 99999999999999999999987654

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=95.37  E-value=0.052  Score=48.47  Aligned_cols=74  Identities=23%  Similarity=0.242  Sum_probs=47.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC----HHHHHHHhhcCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD----AKAVNKFFSENAF  146 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d----~~~v~~~~~~~~~  146 (296)
                      .+|+|+|++|.+|..+++.+.+.|++++++.++..+.    +.+.+.   +.. .++  |..+    .+.+.+.....++
T Consensus       142 ~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~----~~~~~~---g~~-~~~--~~~~~~~~~~~~~~~~~~~~~  211 (334)
T PTZ00354        142 QSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKV----DFCKKL---AAI-ILI--RYPDEEGFAPKVKKLTGEKGV  211 (334)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHHc---CCc-EEE--ecCChhHHHHHHHHHhCCCCc
Confidence            7899999999999999999999999988776543222    222222   111 122  2222    2334444433579


Q ss_pred             cEEEEccc
Q 022471          147 DAVMHFAA  154 (296)
Q Consensus       147 D~vi~~Ag  154 (296)
                      |+++++.|
T Consensus       212 d~~i~~~~  219 (334)
T PTZ00354        212 NLVLDCVG  219 (334)
T ss_pred             eEEEECCc
Confidence            99999875

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=95.37  E-value=0.062  Score=48.67  Aligned_cols=76  Identities=25%  Similarity=0.273  Sum_probs=46.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCe-EEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCc-E
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD-A  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D-~  148 (296)
                      ++|+|+| +|.+|..+++.+...|++ |++++++..+.    +.++++   +. -.++..+-.+.+.+.+.....++| +
T Consensus       162 ~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~----~~~~~~---Ga-~~~i~~~~~~~~~~~~~~~~~~~d~~  232 (347)
T PRK10309        162 KNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKL----ALAKSL---GA-MQTFNSREMSAPQIQSVLRELRFDQL  232 (347)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHH----HHHHHc---CC-ceEecCcccCHHHHHHHhcCCCCCeE
Confidence            7999997 599999999988889997 56666543322    222222   11 122222212234555555445688 8


Q ss_pred             EEEcccc
Q 022471          149 VMHFAAV  155 (296)
Q Consensus       149 vi~~Ag~  155 (296)
                      +|.++|.
T Consensus       233 v~d~~G~  239 (347)
T PRK10309        233 ILETAGV  239 (347)
T ss_pred             EEECCCC
Confidence            8998873

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=95.36  E-value=0.05  Score=47.79  Aligned_cols=73  Identities=19%  Similarity=0.226  Sum_probs=43.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCe-EEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC-HHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~D~  148 (296)
                      .+|+|.|+ |.||..+++.+...|++ |+++++++.+.    +.++++   +.  .. ..|..+ .+.+.++....++|+
T Consensus       122 ~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~----~~a~~~---Ga--~~-~i~~~~~~~~~~~~~~~~g~d~  190 (280)
T TIGR03366       122 RRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRR----ELALSF---GA--TA-LAEPEVLAERQGGLQNGRGVDV  190 (280)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH----HHHHHc---CC--cE-ecCchhhHHHHHHHhCCCCCCE
Confidence            78999986 89999999888888987 77776433222    222222   11  11 112222 223333332246999


Q ss_pred             EEEccc
Q 022471          149 VMHFAA  154 (296)
Q Consensus       149 vi~~Ag  154 (296)
                      +|.+.|
T Consensus       191 vid~~G  196 (280)
T TIGR03366       191 ALEFSG  196 (280)
T ss_pred             EEECCC
Confidence            999987

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=95.36  E-value=0.27  Score=46.92  Aligned_cols=104  Identities=19%  Similarity=0.203  Sum_probs=62.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC-------------HH--
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-------------AK--  135 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-------------~~--  135 (296)
                      .+|+|.|+ |.+|...++.+...|+.|++++++....    +.++.+     ..+++..|..+             .+  
T Consensus       165 akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rl----e~a~~l-----Ga~~v~v~~~e~g~~~~gYa~~~s~~~~  234 (511)
T TIGR00561       165 AKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVK----EQVQSM-----GAEFLELDFKEEGGSGDGYAKVMSEEFI  234 (511)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHc-----CCeEEeccccccccccccceeecCHHHH
Confidence            78999995 9999999999999999999998755432    222222     22333444311             11  


Q ss_pred             -HHHHHhhc--CCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccc
Q 022471          136 -AVNKFFSE--NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTC  197 (296)
Q Consensus       136 -~v~~~~~~--~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~  197 (296)
                       ...+.+.+  .+.|++|+++-+...+.    +       ...+...++.|++.  ..||-+|+.
T Consensus       235 ~~~~~~~~e~~~~~DIVI~TalipG~~a----P-------~Lit~emv~~MKpG--svIVDlA~d  286 (511)
T TIGR00561       235 AAEMELFAAQAKEVDIIITTALIPGKPA----P-------KLITEEMVDSMKAG--SVIVDLAAE  286 (511)
T ss_pred             HHHHHHHHHHhCCCCEEEECcccCCCCC----C-------eeehHHHHhhCCCC--CEEEEeeeC
Confidence             11222222  57999999994433211    1       11244556666543  468878774

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=95.36  E-value=0.22  Score=41.18  Aligned_cols=79  Identities=15%  Similarity=0.090  Sum_probs=49.8

Q ss_pred             CCCCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC-HHHHHHHhhcC
Q 022471           66 HEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSEN  144 (296)
Q Consensus        66 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~  144 (296)
                      ...+ |+|+|.|.|.-+|+-++..|+++|+.|++++.+.....          ..+...........| ...+.+.+  .
T Consensus        59 ~l~G-K~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~~----------~~~~~~~hs~t~~~~~~~~l~~~~--~  125 (197)
T cd01079          59 RLYG-KTITIINRSEVVGRPLAALLANDGARVYSVDINGIQVF----------TRGESIRHEKHHVTDEEAMTLDCL--S  125 (197)
T ss_pred             CCCC-CEEEEECCCccchHHHHHHHHHCCCEEEEEecCccccc----------ccccccccccccccchhhHHHHHh--h
Confidence            3445 99999999999999999999999999999864321100          000000011111112 12355556  4


Q ss_pred             CCcEEEEcccccC
Q 022471          145 AFDAVMHFAAVAY  157 (296)
Q Consensus       145 ~~D~vi~~Ag~~~  157 (296)
                      +.|+||-.+|...
T Consensus       126 ~ADIVIsAvG~~~  138 (197)
T cd01079         126 QSDVVITGVPSPN  138 (197)
T ss_pred             hCCEEEEccCCCC
Confidence            6799999888643

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.34  E-value=0.053  Score=46.31  Aligned_cols=32  Identities=25%  Similarity=0.417  Sum_probs=29.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC---eEEEEecC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY---RVTIVDNL  103 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~---~V~~~~r~  103 (296)
                      ++|+|.|| |+.|..++..|.+.|.   +|++++|+
T Consensus        26 ~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          26 VKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            89999997 9999999999999997   49999987

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=95.32  E-value=0.047  Score=48.92  Aligned_cols=35  Identities=17%  Similarity=0.307  Sum_probs=28.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLS  104 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~  104 (296)
                      |++|.|.||+|..|.+|.+.|+.+. .++.+...+.
T Consensus         2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~   37 (349)
T COG0002           2 MIKVGIVGASGYTGLELLRLLAGHPDVELILISSRE   37 (349)
T ss_pred             CceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechh
Confidence            5799999999999999999999985 4766665333

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=95.32  E-value=0.078  Score=47.19  Aligned_cols=74  Identities=24%  Similarity=0.238  Sum_probs=46.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH-HHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA-KAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~D~v  149 (296)
                      .+|+|.|++|.+|..+++.+...|++|++++++..+.+    .+.++   +  +..+ .|..+. ..+.+.....++|++
T Consensus       148 ~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~----~~~~~---g--~~~~-~~~~~~~~~~~~~~~~~~~d~v  217 (325)
T cd05280         148 GPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQAD----YLKSL---G--ASEV-LDREDLLDESKKPLLKARWAGA  217 (325)
T ss_pred             CEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH----HHHhc---C--CcEE-EcchhHHHHHHHHhcCCCccEE
Confidence            57999999999999999888889999988876543322    22222   1  1111 122222 123333333569999


Q ss_pred             EEccc
Q 022471          150 MHFAA  154 (296)
Q Consensus       150 i~~Ag  154 (296)
                      +++.|
T Consensus       218 i~~~~  222 (325)
T cd05280         218 IDTVG  222 (325)
T ss_pred             EECCc
Confidence            99876

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis []

Probab=95.30  E-value=0.1  Score=47.52  Aligned_cols=100  Identities=13%  Similarity=0.116  Sum_probs=64.1

Q ss_pred             CCcEEEEcccccCcCC--CCcCh-HHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHH
Q 022471          145 AFDAVMHFAAVAYVGE--STLDP-LKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYG  221 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~--~~~~~-~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~  221 (296)
                      +++.+|.+-|......  +.... .-.++.|+.-++.+.+--.+.+.+++|.++|...            .......+|.
T Consensus       203 ~i~t~is~LGsts~~a~~s~~~~~~IDy~Lnl~laq~f~~~~~~~~~K~~vIvTSfn~------------~~~s~~f~Yf  270 (410)
T PF08732_consen  203 DIKTMISTLGSTSAQAKSSKAARHKIDYQLNLDLAQTFANDIKNTGNKKLVIVTSFNN------------NAISSMFPYF  270 (410)
T ss_pred             hhhhheecCCCChhhccccccchhhccccccHHHHHHhhhhhccCCCceEEEEEecCc------------chhhhhhhhh
Confidence            5677888777644322  11111 1233445444444443333777899999999543            2334578999


Q ss_pred             HHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          222 KAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       222 ~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                      .+|...|.-+...-...=-..+++|||.+.|.+.+
T Consensus       271 k~K~~LE~dl~~~l~~~l~~lvILRPGplvG~h~~  305 (410)
T PF08732_consen  271 KTKGELENDLQNLLPPKLKHLVILRPGPLVGEHGS  305 (410)
T ss_pred             HHHHHHHHHHHhhcccccceEEEecCccccCCCCC
Confidence            99999998777653322246899999999999866

It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage.

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.30  E-value=0.02  Score=47.06  Aligned_cols=44  Identities=27%  Similarity=0.354  Sum_probs=34.1

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhh
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQE  116 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~  116 (296)
                      +|.|.|| |.+|+.++..++..|++|++.++++...+...+.++.
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~   44 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER   44 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence            5889997 9999999999999999999999876655555444443

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.29  E-value=0.32  Score=46.33  Aligned_cols=72  Identities=24%  Similarity=0.143  Sum_probs=47.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcc-hhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNI-GAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      ++|+|.|+ |++|.++|+.|.++|++|+++++.+.... ...+.+++     .++.++..+-..      ..  ..+|.|
T Consensus        17 ~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~-----~gv~~~~~~~~~------~~--~~~D~V   82 (480)
T PRK01438         17 LRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEA-----LGATVRLGPGPT------LP--EDTDLV   82 (480)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHH-----cCCEEEECCCcc------cc--CCCCEE
Confidence            78999996 88999999999999999999986442211 11222222     235554433221      11  468999


Q ss_pred             EEccccc
Q 022471          150 MHFAAVA  156 (296)
Q Consensus       150 i~~Ag~~  156 (296)
                      |-..|+.
T Consensus        83 v~s~Gi~   89 (480)
T PRK01438         83 VTSPGWR   89 (480)
T ss_pred             EECCCcC
Confidence            9988874

>PLN02740 Alcohol dehydrogenase-like

Probab=95.29  E-value=0.074  Score=48.98  Aligned_cols=74  Identities=18%  Similarity=0.109  Sum_probs=46.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC-----HHHHHHHhhc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-----AKAVNKFFSE  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-----~~~v~~~~~~  143 (296)
                      +.+|+|.|+ |.||..+++.+...|+ +|+++++++.+.+    .++++   +.. .++  |..+     .+.+.++.. 
T Consensus       199 g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~----~a~~~---Ga~-~~i--~~~~~~~~~~~~v~~~~~-  266 (381)
T PLN02740        199 GSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFE----KGKEM---GIT-DFI--NPKDSDKPVHERIREMTG-  266 (381)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHH----HHHHc---CCc-EEE--ecccccchHHHHHHHHhC-
Confidence            379999985 9999999998888998 5888876543322    22222   111 122  3332     123444432 


Q ss_pred             CCCcEEEEcccc
Q 022471          144 NAFDAVMHFAAV  155 (296)
Q Consensus       144 ~~~D~vi~~Ag~  155 (296)
                      +++|++|.++|.
T Consensus       267 ~g~dvvid~~G~  278 (381)
T PLN02740        267 GGVDYSFECAGN  278 (381)
T ss_pred             CCCCEEEECCCC
Confidence            379999999883

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.27  E-value=0.11  Score=46.81  Aligned_cols=74  Identities=22%  Similarity=0.209  Sum_probs=46.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      .+|+|.|++|.+|..+++.+...|++|++++... +    .+.+++.   +.. .+...+-.+... .+.....++|++|
T Consensus       179 ~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~----~~~~~~~---g~~-~~~~~~~~~~~~-~~~~~~~~~d~vi  248 (350)
T cd08274         179 ETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-K----EEAVRAL---GAD-TVILRDAPLLAD-AKALGGEPVDVVA  248 (350)
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-h----hHHHHhc---CCe-EEEeCCCccHHH-HHhhCCCCCcEEE
Confidence            7999999999999999999999999998877432 1    1222222   111 122111112222 2233335799999


Q ss_pred             Eccc
Q 022471          151 HFAA  154 (296)
Q Consensus       151 ~~Ag  154 (296)
                      ++.|
T Consensus       249 ~~~g  252 (350)
T cd08274         249 DVVG  252 (350)
T ss_pred             ecCC
Confidence            9887

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK13303 L-aspartate dehydrogenase; Provisional

Probab=95.24  E-value=0.41  Score=41.91  Aligned_cols=31  Identities=32%  Similarity=0.306  Sum_probs=25.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhC-CCeEEEEe
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVD  101 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~  101 (296)
                      |++|.|.|. |.||+.+++++.+. +.++..+.
T Consensus         1 m~rVgIiG~-G~iG~~~~~~l~~~~~~~l~~v~   32 (265)
T PRK13303          1 MMKVAMIGF-GAIGAAVLELLEHDPDLRVDWVI   32 (265)
T ss_pred             CcEEEEECC-CHHHHHHHHHHhhCCCceEEEEE
Confidence            478999998 99999999999886 56766655

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.22  E-value=0.077  Score=42.68  Aligned_cols=32  Identities=31%  Similarity=0.423  Sum_probs=26.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEe
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVD  101 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~  101 (296)
                      +|+|+|.|.+.-+|+.++..|.++|+.|+++.
T Consensus        36 Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h   67 (160)
T PF02882_consen   36 GKKVVVVGRSNIVGKPLAMLLLNKGATVTICH   67 (160)
T ss_dssp             T-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-
T ss_pred             CCEEEEECCcCCCChHHHHHHHhCCCeEEecc
Confidence            39999999999999999999999999999875

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=95.21  E-value=0.11  Score=46.61  Aligned_cols=34  Identities=12%  Similarity=0.005  Sum_probs=30.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      .+|+|.|++|.+|..+++.+...|.+|+++.+..
T Consensus       148 ~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~  181 (341)
T cd08290         148 DWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDR  181 (341)
T ss_pred             CEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCC
Confidence            7999999999999999999999999998887543

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=95.19  E-value=0.069  Score=49.83  Aligned_cols=36  Identities=28%  Similarity=0.213  Sum_probs=31.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG  106 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~  106 (296)
                      +++|+|.|. |.||+.+++.|...|++|+++++++.+
T Consensus       212 Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~r  247 (425)
T PRK05476        212 GKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPIC  247 (425)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchh
Confidence            489999996 899999999999999999999876543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	296
1z45_A	699	Crystal Structure Of The Gal10 Fusion Protein Galac		2e-38
1kvs_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		2e-34
2c20_A	330	Crystal Structure Of Udp-Glucose 4-Epimerase Length		2e-34
2udp_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		3e-34
1lrk_A	338	Crystal Structure Of Escherichia Coli Udp-Galactose		3e-34
1lrj_A	338	Crystal Structure Of E. Coli Udp-Galactose 4-Epimer		4e-34
1kvr_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		5e-34
1kvt_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		6e-34
1kvq_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		6e-34
1kvu_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		8e-34
1a9y_A	338	Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX		1e-33
1a9z_A	338	Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX		2e-33
1hzj_A	348	Human Udp-Galactose 4-Epimerase: Accommodation Of U		6e-33
1i3k_A	348	Molecular Basis For Severe Epimerase-Deficiency Gal		1e-32
1ek5_A	348	Structure Of Human Udp-Galactose 4-Epimerase In Com		2e-32
3enk_A	341	1.9a Crystal Structure Of Udp-Glucose 4-Epimerase F		3e-31
1gy8_A	397	Trypanosoma Brucei Udp-Galactose 4' Epimerase Lengt		6e-26
3ehe_A	313	Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-		1e-20
3icp_A	312	Crystal Structure Of Udp-Galactose 4-Epimerase Leng		1e-19
2p5u_A	311	Crystal Structure Of Thermus Thermophilus Hb8 Udp-G		7e-18
3aw9_A	308	Structure Of Udp-Galactose 4-Epimerase Mutant Lengt		9e-18
4egb_A	346	3.0 Angstrom Resolution Crystal Structure Of Dtdp-G		7e-15
2pzk_A	330	Crystal Structure Of The Bordetella Bronchiseptica		2e-14
1r6d_A	337	Crystal Structure Of Desiv Double Mutant (Dtdp-Gluc		4e-14
1sb8_A	352	Crystal Structure Of Pseudomonas Aeruginosa Udp-N-A		4e-14
1r66_A	337	Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydr		5e-14
3vps_A	321	Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5		6e-14
3lu1_A	364	Crystal Structure Analysis Of Wbgu: A Udp-Galnac 4-		8e-14
3ru9_A	351	Specific Recognition Of N-Acetylated Substrates And		8e-14
3ru7_A	351	Specific Recognition Of N-Acetylated Substrates And		8e-14
3ruc_A	351	Specific Recognition Of N-Acetylated Substrates And		8e-14
4ef7_B	337	Udp-Xylose Synthase Length = 337		2e-13
2b69_A	343	Crystal Structure Of Human Udp-Glucoronic Acid Deca		6e-13
2hun_A	336	Crystal Structure Of Hypothetical Protein Ph0414 Fr		1e-11
1orr_A	347	Crystal Structure Of Cdp-tyvelose 2-epimerase Compl		1e-11
2q1w_A	333	Crystal Structure Of The Bordetella Bronchiseptica		6e-11
1g1a_A	361	The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra		2e-10
2pk3_A	321	Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose		7e-10
1bxk_A	355	Dtdp-Glucose 4,6-Dehydratase From E. Coli Length =		2e-09
1t2a_A	375	Crystal Structure Of Human Gdp-D-Mannose 4,6-Dehydr		3e-08
1kep_A	348	The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra		3e-08
2z1m_A	345	Crystal Structure Of Gdp-D-Mannose Dehydratase From		4e-08
4id9_A	347	Crystal Structure Of A Short-Chain DehydrogenaseRED		4e-08
1db3_A	372	E.Coli Gdp-Mannose 4,6-Dehydratase Length = 372		8e-07
3sxp_A	362	Crystal Structure Of Helicobacter Pylori Adp-L-Glyc		2e-06
3a1n_A	317	Crystal Structure Of L-Threonine Dehydrogenase From		3e-06
2pzj_A	377	Crystal Structure Of The Bordetella Bronchiseptica		4e-06
2hrz_A	342	The Crystal Structure Of The Nucleoside-diphosphate		5e-06
1eq2_A	310	The Crystal Structure Of Adp-L-Glycero-D-Mannohepto		8e-06
3a9w_A	317	Crystal Structure Of L-Threonine Bound L-Threonine		8e-06
1rpn_A	335	Crystal Structure Of Gdp-D-Mannose 4,6-Dehydratase		1e-05
2x6t_A	357	Agme Bound To Adp-B-Mannose Length = 357		3e-05
1z75_A	358	Crystal Structure Of Arna Dehydrogenase (decarboxyl		6e-05
1u9j_A	358	Crystal Structure Of E. Coli Arna (Pmri) Decarboxyl		6e-05
1z73_A	358	Crystal Structure Of E. Coli Arna Dehydrogenase (de		7e-05
1z74_A	358	Crystal Structure Of E.Coli Arna Dehydrogenase (Dec		7e-05
1z7b_A	358	Crystal Structure Of E.Coli Arna Dehydrogenase (Dec		7e-05
2gn4_A	344	Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehyd		7e-05
1i24_A	404	High Resolution Crystal Structure Of The Wild-Type		1e-04
1z7e_A	660	Crystal Structure Of Full Length Arna Length = 660		1e-04
1qrr_A	394	Crystal Structure Of Sqd1 Protein Complex With Nad		1e-04
2bll_A	345	Apo-Structure Of The C-Terminal Decarboxylase Domai		2e-04
1i2b_A	404	Crystal Structure Of Mutant T145a Sqd1 Protein Comp		4e-04
3m2p_A	311	The Crystal Structure Of Udp-N-Acetylglucosamine 4-		8e-04

>pdb|1Z45|A Chain A, Crystal Structure Of The Gal10 Fusion Protein Galactose MutarotaseUDP-Galactose 4-Epimerase From Saccharomyces Cerevisiae Complexed With Nad, Udp-Glucose, And Galactose Length = 699

Iteration: 1
 Score =  155 bits (393), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 87/205 (42%), Positives = 113/205 (55%), Gaps = 8/205 (3%)
Query: 65  QHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRL 124
           Q E     VLVTGGAGYIGSH  + L+++ Y   + DNLS     +V  L+ L      +
Sbjct: 6   QSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKH--HI 63
Query: 125 QFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMA 184
            F   DL D K + K F E   D+V+HFA +  VGEST  PL+YYHN    T+V+LE M 
Sbjct: 64  PFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQ 123
Query: 185 RHGVDTLIYSSTCATYGE----PEKMPITEETPQAPINPYGKAKKMAEDIILDF--SKNS 238
           ++ V   ++SS+   YG+    P  +PI EE P  P NPYG  K   E+I+ D   S   
Sbjct: 124 QYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKK 183
Query: 239 DMAVMILRYFNVIGSDPEGRLGEAP 263
                ILRYFN IG+ P G +GE P
Sbjct: 184 SWKFAILRYFNPIGAHPSGLIGEDP 208

>pdb|1KVS|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score =  142 bits (359), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 75/194 (38%), Positives = 113/194 (58%), Gaps = 4/194 (2%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   I
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNV 250
           +SST   YG+  K+P  E  P   P +PYGK+K M E I+ D  K   D ++ +LRYFN 
Sbjct: 121 FSSTATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNP 180
Query: 251 IGSDPEGRLGEAPR 264
           +G+ P G +GE P+
Sbjct: 181 VGAHPSGDMGEDPQ 194

>pdb|2C20|A Chain A, Crystal Structure Of Udp-Glucose 4-Epimerase Length = 330

Iteration: 1
 Score =  142 bits (358), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 81/194 (41%), Positives = 109/194 (56%), Gaps = 9/194 (4%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+ GGAGYIGSHA  +L+ +   V +VDNL  G+  A+             +F   DL 
Sbjct: 4   ILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAIT---------EGAKFYNGDLR 54
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D   +   F++   +AVMHFAA + VG S   PL+YY+N     L +LE M    VD  I
Sbjct: 55  DKAFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFI 114
Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIG 252
           +SST ATYGE +   ITEET   P N YG+ K   E ++  +S+ S++   I RYFNV G
Sbjct: 115 FSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAG 174
Query: 253 SDPEGRLGEAPRPE 266
           + P G +GE  RPE
Sbjct: 175 ATPNGIIGEDHRPE 188

>pdb|2UDP|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score =  142 bits (357), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 113/194 (58%), Gaps = 4/194 (2%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   I
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNV 250
           +SS+   YG+  K+P  E  P   P +PYGK+K M E I+ D  K   D ++ +LRYFN 
Sbjct: 121 FSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNP 180
Query: 251 IGSDPEGRLGEAPR 264
           +G+ P G +GE P+
Sbjct: 181 VGAHPSGDMGEDPQ 194

>pdb|1LRK|A Chain A, Crystal Structure Of Escherichia Coli Udp-Galactose 4-Epimerase Mutant Y299c Complexed With Udp-N-Acetylglucosamine Length = 338

Iteration: 1
 Score =  141 bits (356), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 113/194 (58%), Gaps = 4/194 (2%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   I
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNV 250
           +SS+   YG+  K+P  E  P   P +PYGK+K M E I+ D  K   D ++ +LRYFN 
Sbjct: 121 FSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNP 180
Query: 251 IGSDPEGRLGEAPR 264
           +G+ P G +GE P+
Sbjct: 181 VGAHPSGDMGEDPQ 194

>pdb|1LRJ|A Chain A, Crystal Structure Of E. Coli Udp-Galactose 4-Epimerase Complexed With Udp-N-Acetylglucosamine Length = 338

Iteration: 1
 Score =  141 bits (356), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 113/194 (58%), Gaps = 4/194 (2%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   I
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNV 250
           +SS+   YG+  K+P  E  P   P +PYGK+K M E I+ D  K   D ++ +LRYFN 
Sbjct: 121 FSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNP 180
Query: 251 IGSDPEGRLGEAPR 264
           +G+ P G +GE P+
Sbjct: 181 VGAHPSGDMGEDPQ 194

>pdb|1KVR|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score =  141 bits (355), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 112/194 (57%), Gaps = 4/194 (2%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   I
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNV 250
           +SS    YG+  K+P  E  P   P +PYGK+K M E I+ D  K   D ++ +LRYFN 
Sbjct: 121 FSSAATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNP 180
Query: 251 IGSDPEGRLGEAPR 264
           +G+ P G +GE P+
Sbjct: 181 VGAHPSGDMGEDPQ 194

>pdb|1KVT|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score =  140 bits (354), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 112/194 (57%), Gaps = 4/194 (2%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   I
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNV 250
           +SS    YG+  K+P  E  P   P +PYGK+K M E I+ D  K   D ++ +LRYFN 
Sbjct: 121 FSSVATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNP 180
Query: 251 IGSDPEGRLGEAPR 264
           +G+ P G +GE P+
Sbjct: 181 VGAHPSGDMGEDPQ 194

>pdb|1KVQ|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score =  140 bits (354), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 112/194 (57%), Gaps = 4/194 (2%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   I
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNV 250
           +SS    YG+  K+P  E  P   P +PYGK+K M E I+ D  K   D ++ +LRYFN 
Sbjct: 121 FSSAATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNP 180
Query: 251 IGSDPEGRLGEAPR 264
           +G+ P G +GE P+
Sbjct: 181 VGAHPSGDMGEDPQ 194

>pdb|1KVU|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score =  140 bits (353), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 73/194 (37%), Positives = 113/194 (58%), Gaps = 4/194 (2%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   I
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNV 250
           +SS+   YG+  K+P  E  P   P +P+GK+K M E I+ D  K   D ++ +LRYFN 
Sbjct: 121 FSSSATVYGDQPKIPYVESFPTGTPQSPFGKSKLMVEQILTDLQKAQPDWSIALLRYFNP 180
Query: 251 IGSDPEGRLGEAPR 264
           +G+ P G +GE P+
Sbjct: 181 VGAHPSGDMGEDPQ 194

>pdb|1A9Y|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Glucose Length = 338

Iteration: 1
 Score =  139 bits (351), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 73/194 (37%), Positives = 112/194 (57%), Gaps = 4/194 (2%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   I
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNV 250
           +SS    YG+  K+P  E  P   P +P+GK+K M E I+ D  K   D ++ +LRYFN 
Sbjct: 121 FSSAATVYGDQPKIPYVESFPTGTPQSPFGKSKLMVEQILTDLQKAQPDWSIALLRYFNP 180
Query: 251 IGSDPEGRLGEAPR 264
           +G+ P G +GE P+
Sbjct: 181 VGAHPSGDMGEDPQ 194

>pdb|1A9Z|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Galactose Length = 338

Iteration: 1
 Score =  139 bits (350), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 73/194 (37%), Positives = 112/194 (57%), Gaps = 4/194 (2%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   I
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNV 250
           +SS    YG+  K+P  E  P   P +P+GK+K M E I+ D  K   D ++ +LRYFN 
Sbjct: 121 FSSAATVYGDNPKIPYVESFPTGTPQSPFGKSKLMVEQILTDLQKAQPDWSIALLRYFNP 180
Query: 251 IGSDPEGRLGEAPR 264
           +G+ P G +GE P+
Sbjct: 181 VGAHPSGDMGEDPQ 194

>pdb|1HZJ|A Chain A, Human Udp-Galactose 4-Epimerase: Accommodation Of Udp-N- Acetylglucosamine Within The Active Site Length = 348

Iteration: 1
 Score =  137 bits (346), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 79/198 (39%), Positives = 113/198 (57%), Gaps = 6/198 (3%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS---RGNIGAVKVLQELFPEPGR-LQFIY 128
           VLVTGGAGYIGSH  L LL+  Y   ++DN     RG     + L+ +    GR ++F  
Sbjct: 5   VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            D+ D  A+ + F + +F AV+HFA +  VGES   PL YY    + T+ +LE M  HGV
Sbjct: 65  MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGV 124
Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSK-NSDMAVMILR 246
             L++SS+   YG P+ +P+ E  P     NPYGK+K   E++I D  + +    V++LR
Sbjct: 125 KNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNVVLLR 184
Query: 247 YFNVIGSDPEGRLGEAPR 264
           YFN  G+   G +GE P+
Sbjct: 185 YFNPTGAHASGCIGEDPQ 202

>pdb|1I3K|A Chain A, Molecular Basis For Severe Epimerase-Deficiency Galactosemia: X-Ray Structure Of The Human V94m- Substituted Udp-Galactose 4-Epimerase Length = 348

Iteration: 1
 Score =  136 bits (342), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 78/198 (39%), Positives = 113/198 (57%), Gaps = 6/198 (3%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS---RGNIGAVKVLQELFPEPGR-LQFIY 128
           VLVTGGAGYIGSH  L LL+  Y   ++DN     RG     + L+ +    GR ++F  
Sbjct: 5   VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            D+ D  A+ + F + +F AV+HFA +  +GES   PL YY    + T+ +LE M  HGV
Sbjct: 65  MDILDQGALQRLFKKYSFMAVIHFAGLKAMGESVQKPLDYYRVNLTGTIQLLEIMKAHGV 124
Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSK-NSDMAVMILR 246
             L++SS+   YG P+ +P+ E  P     NPYGK+K   E++I D  + +    V++LR
Sbjct: 125 KNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNVVLLR 184
Query: 247 YFNVIGSDPEGRLGEAPR 264
           YFN  G+   G +GE P+
Sbjct: 185 YFNPTGAHASGCIGEDPQ 202

>pdb|1EK5|A Chain A, Structure Of Human Udp-Galactose 4-Epimerase In Complex With Nad+ Length = 348

Iteration: 1
 Score =  135 bits (341), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/198 (39%), Positives = 112/198 (56%), Gaps = 6/198 (3%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS---RGNIGAVKVLQELFPEPGR-LQFIY 128
           VLVTGGAGYIGSH  L LL+  Y   ++DN     RG     + L+ +    GR ++F  
Sbjct: 5   VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            D+ D  A+ + F + +F AV+HFA +  VGES   PL YY    + T+ +LE M  HGV
Sbjct: 65  MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGV 124
Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAP-INPYGKAKKMAEDIILDFSK-NSDMAVMILR 246
             L++SS+   YG P+ +P+ E  P     NPYGK+K   E++I D  + +     ++LR
Sbjct: 125 KNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLR 184
Query: 247 YFNVIGSDPEGRLGEAPR 264
           YFN  G+   G +GE P+
Sbjct: 185 YFNPTGAHASGCIGEDPQ 202

>pdb|3ENK|A Chain A, 1.9a Crystal Structure Of Udp-Glucose 4-Epimerase From Burkholderia Pseudomallei Length = 341

Iteration: 1
 Score =  132 bits (331), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 76/193 (39%), Positives = 108/193 (55%), Gaps = 5/193 (2%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRL-QFIYADL 131
           +LVTGGAGYIGSH A+ LL   Y V I DNL      A+  ++++    G+   F   D+
Sbjct: 8   ILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKIT---GKTPAFHETDV 64
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            D +A+ + F  +   A +HFAA+  VGES   P++YY N   + L +L  M    V  +
Sbjct: 65  SDERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRI 124
Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDF-SKNSDMAVMILRYFNV 250
           ++SS+   YG PE+ PI E  P +  NPYG+ K MAE I+ D  + +    V  LRYFN 
Sbjct: 125 VFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQILRDVEAADPSWRVATLRYFNP 184
Query: 251 IGSDPEGRLGEAP 263
           +G+   G +GE P
Sbjct: 185 VGAHESGLIGEDP 197

>pdb|1GY8|A Chain A, Trypanosoma Brucei Udp-Galactose 4' Epimerase Length = 397

Iteration: 1
 Score =  114 bits (285), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 78/213 (36%), Positives = 116/213 (54%), Gaps = 25/213 (11%)
Query: 73  VLVTGGAGYIGSHAALRLLKDS-YRVTIVDNL-----------SRGNIGAVKVLQELFPE 120
           VLV GGAGYIGSH    LL+D+ + V IVD+L           +R N+ A K+ Q   P+
Sbjct: 5   VLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENV-ARKLQQSDGPK 63
Query: 121 PGRL-QFIYADLGDAKA---VNKFFSENA-FDAVMHFAAVAYVGESTLDPLKYYHNITSN 175
           P    ++   ++GD +    +N  F+ +   DAV+H  A   VGES  DPLKYY N    
Sbjct: 64  PPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVG 123
Query: 176 TLVVLESMARHGVDTLIYSSTCATYGEP-------EKMPITEETPQAPINPYGKAKKMAE 228
            L +L++M  H  D +I+SS+ A +G P          PI     ++P +PYG++K +AE
Sbjct: 124 ILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAE 183
Query: 229 DIILDFSKNSDMAVMILRYFNVIGSDPEGRLGE 261
            +I D ++   +  + LRYFN  G+  +G +GE
Sbjct: 184 RMIRDCAEAYGIKGICLRYFNACGAHEDGDIGE 216

>pdb|3EHE|A Chain A, Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-1) From Archaeoglobus Fulgidus Length = 313

Iteration: 1
 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/180 (35%), Positives = 93/180 (51%), Gaps = 13/180 (7%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           ++VTGGAG+IGSH   +L  +S  + ++DNLS GN       +E   E  RL  + ADL 
Sbjct: 4   IVVTGGAGFIGSHVVDKL-SESNEIVVIDNLSSGN-------EEFVNEAARL--VKADLA 53
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
            A  +  +      + V H AA   V     +P + Y N    T  +LE+M + GV  ++
Sbjct: 54  -ADDIKDYLK--GAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIV 110
Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIG 252
           ++ST   YGE + +P  E+ P  PI+ YG +K   E +I  +    DM   I R+ NVIG
Sbjct: 111 FTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFDMQAWIYRFANVIG 170

>pdb|3ICP|A Chain A, Crystal Structure Of Udp-Galactose 4-Epimerase Length = 312

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/184 (34%), Positives = 94/184 (51%), Gaps = 19/184 (10%)
Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            ++VTGGAG+IGSH   +L++  Y V +VDNLS G    V    EL            DL
Sbjct: 2   RIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELH---------VRDL 52
Query: 132 GDAKAVNKFFSENAF---DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            D       +S  A    D V HFAA   V  ST +P+ +++     T  VLE   + GV
Sbjct: 53  KD-------YSWGAGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGV 105
Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYF 248
            T++++S+   YG+ + +P  EE P  PI+ YG AK   E +   +++   +  + +RY 
Sbjct: 106 RTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYA 165
Query: 249 NVIG 252
           NV+G
Sbjct: 166 NVVG 169

>pdb|2P5U|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8 Udp-Glucose 4- Epimerase Complex With Nad Length = 311

Iteration: 1
 Score = 87.8 bits (216), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 68/192 (35%), Positives = 93/192 (48%), Gaps = 13/192 (6%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGGAG+IGSH    LL     V ++DNL+ G    V         P  + F   DL 
Sbjct: 3   VLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENV---------PKGVPFFRVDLR 53
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D + V + F E     V H AA A V  S  DP+  +       L +LE+  ++GV+ L+
Sbjct: 54  DKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLV 113
Query: 193 YSST-CATYGE-PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNV 250
           ++ST  A YGE PE     E  P  P +PY  +K   E  +  + ++  +  + LRY NV
Sbjct: 114 FASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNV 173
Query: 251 IG--SDPEGRLG 260
            G   DP G  G
Sbjct: 174 YGPRQDPHGEAG 185

>pdb|3AW9|A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant Length = 308

Iteration: 1
 Score = 87.4 bits (215), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 92/184 (50%), Gaps = 23/184 (12%)
Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            ++VTGGAG+IGSH   +L++  Y V +VD + R   G+              +    DL
Sbjct: 2   RIVVTGGAGFIGSHLVDKLVELGYEVVVVDIVQRDTGGSA-------------ELHVRDL 48
Query: 132 GDAKAVNKFFSENAF---DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            D       +S  A    D V HFAA   V  ST +P+ +++     T  VLE   + GV
Sbjct: 49  KD-------YSWGAGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGV 101
Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYF 248
            T++++S+   YG+ + +P  EE P  PI+ YG AK   E +   +++   +  + +RY 
Sbjct: 102 RTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYA 161
Query: 249 NVIG 252
           NV+G
Sbjct: 162 NVVG 165

>pdb|4EGB|A Chain A, 3.0 Angstrom Resolution Crystal Structure Of Dtdp-Glucose 4,6- Dehydratase (Rfbb) From Bacillus Anthracis Str. Ames In Complex With Nad Length = 346

Iteration: 1
 Score = 77.8 bits (190), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 96/185 (51%), Gaps = 8/185 (4%)
Query: 72  HVLVTGGAGYIGSHAALRLLK--DSYRVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIY 128
           ++LVTGGAG+IGS+     L+  ++Y++   D L+  GN+  VK +Q+    P    F+ 
Sbjct: 26  NILVTGGAGFIGSNFVHYXLQSYETYKIINFDALTYSGNLNNVKSIQD---HPNYY-FVK 81
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            ++ + + +     E     +++FAA ++V  S  +P+ +Y      T+ +LE + ++  
Sbjct: 82  GEIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPH 141
Query: 189 DTLIYSSTCATYGEPEKM-PITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRY 247
             L+  ST   YG   K    TEETP AP +PY  +K  A+ I L + K   + V++ R 
Sbjct: 142 IKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADXIALAYYKTYQLPVIVTRC 201
Query: 248 FNVIG 252
            N  G
Sbjct: 202 SNNYG 206

>pdb|2PZK|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmg In Complex With Nad Length = 330

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 24/210 (11%)
Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            +L+TGGAG +GS+     L   + + ++DN + G        +E+ P    L  I   +
Sbjct: 22  RILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGK-------REVLPPVAGLSVIEGSV 74
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMARHGV 188
            DA  + + F       V+H AA AY      DP  +  +  +N   ++ V ++ ++ GV
Sbjct: 75  TDAGLLERAFDSFKPTHVVHSAA-AY-----KDPDDWAEDAATNVQGSINVAKAASKAGV 128
Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYF 248
             L+   T   YG P  +PI  ++P AP   YG +K   E  ++     SD+ V+ LR  
Sbjct: 129 KRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLM----MSDVPVVSLRLA 184
Query: 249 NVIGSDPEGRLGEAPRPELREHGRISGACF 278
           NV G     RL   P P   +  +    CF
Sbjct: 185 NVTGP----RLAIGPIPTFYKRLKAGQKCF 210

>pdb|1R6D|A Chain A, Crystal Structure Of Desiv Double Mutant (Dtdp-Glucose 4,6- Dehydratase) From Streptomyces Venezuelae With Nad And Dau Bound Length = 337

Iteration: 1
 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSY------RVTIVDNLS----RGNIGAVKVLQELFPEPG 122
           +LVTGGAG+IGSH   +LL  +Y       V ++D+L+    R N+  V        +P 
Sbjct: 3   LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDA------DP- 55
Query: 123 RLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLES 182
           RL+F++ D+ DA  + +       DA++HFAA ++V  S      +       T  +L+ 
Sbjct: 56  RLRFVHGDIRDAGLLAREL--RGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQC 113
Query: 183 MARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAV 242
               GV  +++ ST   YG  +    TE +P  P +PY  +K  ++ +   + +   + V
Sbjct: 114 AVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDV 173
Query: 243 MILRYFNVIG 252
            I R  N  G
Sbjct: 174 RITRCCNNYG 183

>pdb|1SB8|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Udp-N-Acetylglucosamine 4- Epimerase Complexed With Udp-N-Acetylgalactosamine Length = 352

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 6/188 (3%)
Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEP--GRLQFIYADL 131
           L+TG AG+IGS+    LLK   +V  +DN + G+   +  ++ L  E      +FI  D+
Sbjct: 31  LITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDI 90
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            +    N   +    D V+H AA+  V  S  DP+          L +L +     V + 
Sbjct: 91  RNLDDCNNACA--GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSF 148
Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVI 251
            Y+++ +TYG+   +P  E+T   P++PY   K + E     FS+    + + LRYFNV 
Sbjct: 149 TYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVF 208
Query: 252 G--SDPEG 257
           G   DP G
Sbjct: 209 GRRQDPNG 216

>pdb|1R66|A Chain A, Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydratase) From Streptomyces Venezuelae With Nad And Tyd Bound Length = 337

Iteration: 1
 Score = 75.1 bits (183), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSY------RVTIVDNLS----RGNIGAVKVLQELFPEPG 122
           +LVTGGAG+IGSH   +LL  +Y       V ++D+L+    R N+  V        +P 
Sbjct: 3   LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDA------DP- 55
Query: 123 RLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLES 182
           RL+F++ D+ DA  + +       DA++HFAA ++V  S      +       T  +L+ 
Sbjct: 56  RLRFVHGDIRDAGLLAREL--RGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQC 113
Query: 183 MARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAV 242
               GV  +++ ST   YG  +    TE +P  P +PY  +K  ++ +   + +   + V
Sbjct: 114 AVDAGVGRVVHVSTDEVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDV 173
Query: 243 MILRYFNVIG 252
            I R  N  G
Sbjct: 174 RITRCCNNYG 183

>pdb|3VPS|A Chain A, Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5,6-Dehydratase, Tuna, Involved In Tunicamycin Biosynthesis Length = 321

Iteration: 1
 Score = 74.7 bits (182), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 25/187 (13%)
Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            +L+TGGAG+IG H A  L+     VT++D+L          +  + P  G  +F+    
Sbjct: 9   RILITGGAGFIGGHLARALVASGEEVTVLDDLR---------VPPMIPPEGTGKFL---- 55
Query: 132 GDAKAVNKFFSENAFDA--VMHFAAVAYVGESTLDPLKYYHNITS--NTLVVLESMARHG 187
              K V +    +  D   V H A+   V  S   PL Y  N+ S  + L +  S+   G
Sbjct: 56  --EKPVLELEERDLSDVRLVYHLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSV---G 110
Query: 188 VDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMA--VMIL 245
           V  ++  STC  YG+ + +P  E++P +P +PY  A K+  +++    + + +A  V I+
Sbjct: 111 VPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYA-ASKVGLEMVAGAHQRASVAPEVGIV 169
Query: 246 RYFNVIG 252
           R+FNV G
Sbjct: 170 RFFNVYG 176

>pdb|3LU1|A Chain A, Crystal Structure Analysis Of Wbgu: A Udp-Galnac 4-Epimerase Length = 364

Iteration: 1
 Score = 74.3 bits (181), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 90/189 (47%), Gaps = 8/189 (4%)
Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG---NIGAVKVLQELFPEPGRLQFIYAD 130
           L+TG AG+IGS+   +LLK +  V  +DN S G   N+  VK L     +  R  FI  D
Sbjct: 42  LITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVST-EQWSRFCFIEGD 100
Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           + D     +       D V+H AA+  V  S +DP+       +  L +L +     V +
Sbjct: 101 IRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQS 158
Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNV 250
             Y+++ +TYG+   +P  EE    P++PY   K + E     +++      + LRYFNV
Sbjct: 159 FTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNV 218
Query: 251 IG--SDPEG 257
            G   DP G
Sbjct: 219 FGRRQDPNG 227

>pdb|3RU9|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351

Iteration: 1
 Score = 74.3 bits (181), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 90/189 (47%), Gaps = 8/189 (4%)
Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG---NIGAVKVLQELFPEPGRLQFIYAD 130
           L+TG AG+IGS+   +LLK +  V  +DN S G   N+  VK L     +  R  FI  D
Sbjct: 29  LITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVST-EQWSRFCFIEGD 87
Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           + D     +       D V+H AA+  V  S +DP+       +  L +L +     V +
Sbjct: 88  IRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQS 145
Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNV 250
             Y+++ +TYG+   +P  EE    P++PY   K + E     +++      + LRYFNV
Sbjct: 146 FTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNV 205
Query: 251 IG--SDPEG 257
            G   DP G
Sbjct: 206 FGRRQDPNG 214

>pdb|3RU7|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351

Iteration: 1
 Score = 74.3 bits (181), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 90/189 (47%), Gaps = 8/189 (4%)
Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG---NIGAVKVLQELFPEPGRLQFIYAD 130
           L+TG AG+IGS+   +LLK +  V  +DN S G   N+  VK L     +  R  FI  D
Sbjct: 23  LITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVST-EQWSRFCFIEGD 81
Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           + D     +       D V+H AA+  V  S +DP+       +  L +L +     V +
Sbjct: 82  IRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQS 139
Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNV 250
             Y+++ +TYG+   +P  EE    P++PY   K + E     +++      + LRYFNV
Sbjct: 140 FTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNV 199
Query: 251 IG--SDPEG 257
            G   DP G
Sbjct: 200 FGRRQDPNG 208

>pdb|3RUC|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351

Iteration: 1
 Score = 74.3 bits (181), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 90/189 (47%), Gaps = 8/189 (4%)
Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG---NIGAVKVLQELFPEPGRLQFIYAD 130
           L+TG AG+IGS+   +LLK +  V  +DN S G   N+  VK L     +  R  FI  D
Sbjct: 29  LITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVST-EQWSRFCFIEGD 87
Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           + D     +       D V+H AA+  V  S +DP+       +  L +L +     V +
Sbjct: 88  IRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQS 145
Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNV 250
             Y+++ +TYG+   +P  EE    P++PY   K + E     +++      + LRYFNV
Sbjct: 146 FTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNV 205
Query: 251 IG--SDPEG 257
            G   DP G
Sbjct: 206 FGRRQDPNG 214

>pdb|2B69|A Chain A, Crystal Structure Of Human Udp-Glucoronic Acid Decarboxylase Length = 343

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 85/193 (44%), Gaps = 21/193 (10%)
Query: 67  EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVK--VLQELFPEPGRL 124
           E+    +L+TGGAG++GSH   +L  D + VT+VDN   G    V+  +  E F      
Sbjct: 24  EKDRKRILITGGAGFVGSHLTDKLXXDGHEVTVVDNFFTGRKRNVEHWIGHENF------ 77
Query: 125 QFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMA 184
                +L +   V   + E   D + H A+ A       +P+K     T  TL  L    
Sbjct: 78  -----ELINHDVVEPLYIE--VDQIYHLASPASPPNYXYNPIKTLKTNTIGTLNXLGLAK 130
Query: 185 RHGVDTLIYSSTCATYGEPEKMPITEE-----TPQAPINPYGKAKKMAEDIILDFSKNSD 239
           R G   L+ +ST   YG+PE  P +E+      P  P   Y + K++AE     + K   
Sbjct: 131 RVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETXCYAYXKQEG 189
Query: 240 MAVMILRYFNVIG 252
           + V + R FN  G
Sbjct: 190 VEVRVARIFNTFG 202

>pdb|2HUN|A Chain A, Crystal Structure Of Hypothetical Protein Ph0414 From Pyrococcus Horikoshii Ot3 Length = 336

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 90/183 (49%), Gaps = 8/183 (4%)
Query: 73  VLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
           +LVTGG G+IGS+    +L+    + V  +D L  G+  A   L++L  +P R  F+  D
Sbjct: 6   LLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPAN--LKDLEDDP-RYTFVKGD 62
Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           + D + V +   +   D V+H AA ++V  S   P  + H+    T  +LES+ R   + 
Sbjct: 63  VADYELVKELVRK--VDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEV 120
Query: 191 -LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFN 249
             ++ ST   YG+  K   TE     P +PY   K  ++ ++L +++  ++   I R  N
Sbjct: 121 RFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDMLVLGWTRTYNLNASITRCTN 180
Query: 250 VIG 252
             G
Sbjct: 181 NYG 183

>pdb|1ORR|A Chain A, Crystal Structure Of Cdp-tyvelose 2-epimerase Complexed With Nad And Cdp Length = 347

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 20/197 (10%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TGG G++GS+ A   L     + + DNLSR   GA   L  L    G  +F++ D+ 
Sbjct: 4   LLITGGCGFLGSNLASFALSQGIDLIVFDNLSRK--GATDNLHWL-SSLGNFEFVHGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TL 191
           +   V +  ++   D+  H A    +  S  +P   +      TL +LE++ ++  +  +
Sbjct: 61  NKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNI 120
Query: 192 IYSSTCATYGEPEKMPITE---------------ETPQAPI-NPYGKAKKMAEDIILDFS 235
           IYSST   YG+ E+    E               E+ Q    +PYG +K  A+  +LD++
Sbjct: 121 IYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYA 180
Query: 236 KNSDMAVMILRYFNVIG 252
           +   +  ++ R+ ++ G
Sbjct: 181 RIFGLNTVVFRHSSMYG 197

>pdb|2Q1W|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmh In Complex With Nad+ Length = 333

Iteration: 1
 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 20/184 (10%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V +TG  G IGSH A  LL+   +V  +DN + G        +E   +   L F+   + 
Sbjct: 24  VFITGICGQIGSHIAELLLERGDKVVGIDNFATGR-------REHLKDHPNLTFVEGSIA 76
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTL---VVLESMARHGVD 189
           D   VN+   +   DAV+H AA      S  DP  +Y++  +N +    V+++  ++ V 
Sbjct: 77  DHALVNQLIGDLQPDAVVHTAA------SYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVG 130
Query: 190 TLIYSSTCATYG-EPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYF 248
             +Y  T   YG +P + P+  + P+ P N      K A +  L++S    +  +  R  
Sbjct: 131 RFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYSG---LDFVTFRLA 187
Query: 249 NVIG 252
           NV+G
Sbjct: 188 NVVG 191

>pdb|1G1A|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb)from Salmonella Enterica Serovar Typhimurium Length = 361

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 23/200 (11%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTI-VDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           +L+TGGAG+IGS     ++K++    + +D L+    G ++ L ++  E  R  F +AD+
Sbjct: 3   ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYA--GNLESLSDI-SESNRYNFEHADI 59
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH----G 187
            D+  + + F +   DAVMH AA ++V  S   P  +       T  +LE   ++    G
Sbjct: 60  CDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALG 119
Query: 188 VDT-----LIYSSTCATYGE---PEK------MPI-TEETPQAPINPYGKAKKMAEDIIL 232
            D        + ST   YG+   P++      +P+ TE T  AP +PY  +K  ++ ++ 
Sbjct: 120 EDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVR 179
Query: 233 DFSKNSDMAVMILRYFNVIG 252
            + +   +  ++    N  G
Sbjct: 180 AWRRTYGLPTIVTNCSNNYG 199

>pdb|2PK3|A Chain A, Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose Reductase Length = 321

Iteration: 1
 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 16/187 (8%)
Query: 69  GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIY 128
           G    L+TG AG++G + A  L + +  V      SR N       +   P    ++ I 
Sbjct: 11  GSMRALITGVAGFVGKYLANHLTEQNVEVF---GTSRNN-------EAKLPN---VEMIS 57
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            D+ D++ V K  S+   D + H AA + V +S L+    +      TL VL+++    +
Sbjct: 58  LDIMDSQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNL 117
Query: 189 DTLIYS-STCATYGE--PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMIL 245
           D  I +  +   YG   PE+ P++EE    P++PYG +K     +   + K   M ++  
Sbjct: 118 DCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKAYGMDIIHT 177
Query: 246 RYFNVIG 252
           R FN IG
Sbjct: 178 RTFNHIG 184

>pdb|1BXK|A Chain A, Dtdp-Glucose 4,6-Dehydratase From E. Coli Length = 355

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 88/196 (44%), Gaps = 23/196 (11%)
Query: 73  VLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLS-RGNIGAVKVLQELFP--EPGRLQFIY 128
           +L+TGGAG+IGS     ++ + S  V +VD L+  GN      L  L P  +  R  F  
Sbjct: 4   ILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGN------LMSLAPVAQSERFAFEK 57
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            D+ D   + + F+E+  D VMH AA ++V  S   P  +       T  +LE+ AR   
Sbjct: 58  VDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA-ARAYW 116
Query: 189 DTLI----------YSSTCATYGEPEKMP--ITEETPQAPINPYGKAKKMAEDIILDFSK 236
           + L           + ST   YG+        TE TP AP +PY  +K  ++ ++  + +
Sbjct: 117 NALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLR 176
Query: 237 NSDMAVMILRYFNVIG 252
              +  +I    N  G
Sbjct: 177 TYGLPTLITNCSNNYG 192

>pdb|1T2A|A Chain A, Crystal Structure Of Human Gdp-D-Mannose 4,6-Dehydratase Length = 375

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 86/173 (49%), Gaps = 14/173 (8%)
Query: 74  LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEP-----GRLQFI 127
           L+TG  G  GS+ A  LL+  Y V  IV   S  N G +   + L+  P     G ++  
Sbjct: 28  LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRI---EHLYKNPQAHIEGNMKLH 84
Query: 128 YADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARH 186
           Y DL D+  + K  +E     + +  A ++V + + D  +Y  ++    TL +L+++   
Sbjct: 85  YGDLTDSTCLVKIINEVKPTEIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAVKTC 143
Query: 187 GVDTLI---YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK 236
           G+   +    +ST   YG+ +++P  E TP  P +PYG AK  A  I+++F +
Sbjct: 144 GLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFRE 196

>pdb|1KEP|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb) From Streptococcus Suis With Dtdp-Xylose Bound Length = 348

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 22/175 (12%)
Query: 72  HVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA 129
           +++VTGGAG+IGS+    +  +     VT++D L+    G    L+ +  +  R++ +  
Sbjct: 6   NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYA--GNKANLEAILGD--RVELVVG 61
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
           D+ DA+ V+K  ++   DA++H+AA ++   S  DP  + H     T  +LE+  ++ + 
Sbjct: 62  DIADAELVDKLAAK--ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI- 118
Query: 190 TLIYSSTCATYGE---PEKMP---------ITEETPQAPINPYGKAKKMAEDIIL 232
              + ST   YG+    E +P          T ET   P +PY  + K A D+I+
Sbjct: 119 RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYS-STKAASDLIV 172

>pdb|2Z1M|A Chain A, Crystal Structure Of Gdp-D-Mannose Dehydratase From Aquifex Aeolicus Vf5 Length = 345

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 4/168 (2%)
Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD 133
           L+TG  G  G++ A  LL+  Y V   D  S G   + + L+EL  E   ++ I+ DL +
Sbjct: 7   LITGIRGQDGAYLAKLLLEKGYEVYGADRRS-GEFASWR-LKELGIE-NDVKIIHMDLLE 63
Query: 134 AKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIY 193
              + +   +   D V + AA ++VG S   P+          L +LE++     DT  Y
Sbjct: 64  FSNIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFY 123
Query: 194 -SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
            +ST   +G+ +++P TE+TP  P +PY  AK     I +++ +  +M
Sbjct: 124 QASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHWITVNYREAYNM 171

>pdb|4ID9|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SUPERFAMILY Protein From Agrobacterium Tumefaciens (Target Efi-506441) With Bound Nad, Monoclinic Form 1 Length = 347

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 29/185 (15%)
Query: 69  GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIY 128
           G   +LVTG AG +G  A +  L+   R     +L     G  +V+              
Sbjct: 18  GSHMILVTGSAGRVG-RAVVAALRTQGRTVRGFDLRPSGTGGEEVV-------------- 62
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAV----AYVGESTLDPLKYYHNITSNTLVVLESMA 184
             L D +A++        DA+M  +AV    A++  +  D  + +      T  +L++ +
Sbjct: 63  GSLEDGQALS--------DAIMGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAAS 114
Query: 185 RHGVDTLIYSSTCATYGE--PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAV 242
             GV   +++S+   Y E  PE +P+TE+ P  P +PYG  K + E+++    ++  M  
Sbjct: 115 AAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRSGAMET 174
Query: 243 MILRY 247
           +ILR+
Sbjct: 175 VILRF 179

>pdb|1DB3|A Chain A, E.Coli Gdp-Mannose 4,6-Dehydratase Length = 372

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 24/229 (10%)
Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG----RLQFIYA 129
           L+TG  G  GS+ A  LL+  Y V  +    R +    + +  ++ +P     +    Y 
Sbjct: 5   LITGVTGQDGSYLAEFLLEKGYEVHGIKR--RASSFNTERVDHIYQDPHTCNPKFHLHYG 62
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARHGV 188
           DL D   + +   E   D V +  A+++V  S   P +Y  ++ +  TL +LE++   G+
Sbjct: 63  DLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESP-EYTADVDAMGTLRLLEAIRFLGL 121
Query: 189 D--TLIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMIL 245
           +  T  Y +ST   YG  +++P  E TP  P +PY  AK  A  I +++ ++  M     
Sbjct: 122 EKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNG 181
Query: 246 RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVCYHI 294
             FN           E+PR   R    ++     A   I  GL+ C ++
Sbjct: 182 ILFN----------HESPR---RGETFVTRKITRAIANIAQGLESCLYL 217

>pdb|3SXP|A Chain A, Crystal Structure Of Helicobacter Pylori Adp-L-Glycero-D-Manno- Heptose-6-Epimerase (Rfad, Hp0859) Length = 362

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 17/188 (9%)
Query: 73  VLVTGGAGYIGSHAALRLLKD--SYRVTIVDN------LSRGNIGAVKVLQELFPEPGRL 124
           +L+TGGAG++GS+ A    ++    +V ++D        S     ++   + L    G +
Sbjct: 13  ILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEV 72
Query: 125 QFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMA 184
             I AD+ +   + +   +  FD + H AAV+   ++T+   +          + L  +A
Sbjct: 73  --IAADINNPLDLRR-LEKLHFDYLFHQAAVS---DTTMLNQELVMKTNYQAFLNLLEIA 126
Query: 185 RHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMI 244
           R     +IY+S+   YG   K P      ++P N YG +K   ++ +L  S ++D   + 
Sbjct: 127 RSKKAKVIYASSAGVYGNT-KAPNVVGKNESPENVYGFSKLCMDEFVL--SHSNDNVQVG 183
Query: 245 LRYFNVIG 252
           LRYFNV G
Sbjct: 184 LRYFNVYG 191

>pdb|3A1N|A Chain A, Crystal Structure Of L-Threonine Dehydrogenase From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 16/190 (8%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTG +G IG+     L          +   + N+ A  ++Q    + G ++FI  D+ 
Sbjct: 2   ILVTGSSGQIGTELVPYL---------AEKYGKKNVIASDIVQR---DTGGIKFITLDVS 49
Query: 133 DAKAVNKFFSENAFDAVMHFAAV-AYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
           +   +++   + + DA+ H A + +  GE   DP   Y    + T  +LE+  +H V+ +
Sbjct: 50  NRDEIDRAVEKYSIDAIFHLAGILSAKGEK--DPALAYKVNMNGTYNILEAAKQHRVEKV 107
Query: 192 IYSSTCATYG-EPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNV 250
           +  ST   +G E  K  +   T   P   YG  K  AE +   + +   + V  LRY  +
Sbjct: 108 VIPSTIGVFGPETPKNKVPSITITRPRTMYGVTKIAAELLGQYYYEKFGLDVRSLRYPGI 167
Query: 251 IGSDPEGRLG 260
           I    E   G
Sbjct: 168 ISYKAEPTAG 177

>pdb|2PZJ|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmf In Complex With Nad+ Length = 377

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 17/190 (8%)
Query: 71  THVLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA 129
           T+V+V GGAG++GS+   RLL+    +V +VDNL    + A K+     P+   ++F   
Sbjct: 33  TNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNL----LSAEKI---NVPDHPAVRFSET 85
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMAR-HGV 188
            + D   +     ++ +D V H A       S  DPL  + N T  TL + E +     +
Sbjct: 86  SITDDALLASL--QDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRL 143
Query: 189 DTLIYSSTCATYGEP--EKMPITEETPQAPI----NPYGKAKKMAEDIILDFSKNSDMAV 242
             ++YS+   +  E   +    TEET    +    +PY  +K   E   + + K   +  
Sbjct: 144 KKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQHQLPT 203
Query: 243 MILRYFNVIG 252
           +  R+ NV G
Sbjct: 204 VRARFQNVYG 213

>pdb|2HRZ|A Chain A, The Crystal Structure Of The Nucleoside-diphosphate-sugar Epimerase From Agrobacterium Tumefaciens Length = 342

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 76/180 (42%), Gaps = 27/180 (15%)
Query: 72  HVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRGNIGAVKVLQELFPE--PG 122
           H+ + G AG +G     RL+KD         + T++D           V Q   P    G
Sbjct: 16  HIAIIGAAGXVGRKLTQRLVKDGSLGGKPVEKFTLID-----------VFQPEAPAGFSG 64
Query: 123 RLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLES 182
            +    ADL       K   E   D + H AA+   GE+ LD  K Y      T  + ++
Sbjct: 65  AVDARAADLSAPGEAEKLV-EARPDVIFHLAAIVS-GEAELDFDKGYRINLDGTRYLFDA 122
Query: 183 MA-RHGVD----TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN 237
           +   +G D     ++++S+ A +G P   PI +E    P+  YG  K + E ++ D+S+ 
Sbjct: 123 IRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRR 182

>pdb|1EQ2|A Chain A, The Crystal Structure Of Adp-L-Glycero-D-Mannoheptose 6- Epimerase Length = 310

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 23/187 (12%)
Query: 73  VLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRG----NIGAVKVLQELFPEPGRLQF 126
           ++VTGGAG+IGS+  ++ L D     + +VDNL  G    N+  + +   +  E   +Q 
Sbjct: 2   IIVTGGAGFIGSNI-VKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQI 60
Query: 127 IYAD-LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMAR 185
           +  +  GD +A+   F E A  +   +      G+  +D     +N   +  ++   + R
Sbjct: 61  MAGEEFGDVEAI---FHEGAXSSTTEWD-----GKYMMD-----NNYQYSKELLHYCLER 107
Query: 186 HGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMIL 245
                 +Y+S+ ATYG      I     + P+N YG +K + ++ +      ++  ++  
Sbjct: 108 E--IPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGF 165
Query: 246 RYFNVIG 252
           RYFNV G
Sbjct: 166 RYFNVYG 172

>pdb|3A9W|A Chain A, Crystal Structure Of L-Threonine Bound L-Threonine Dehydrogenase (Y137f) From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 83/190 (43%), Gaps = 16/190 (8%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTG +G IG+     L          +   + N+ A  ++Q    + G ++FI  D+ 
Sbjct: 2   ILVTGSSGQIGTELVPYL---------AEKYGKKNVIASDIVQR---DTGGIKFITLDVS 49
Query: 133 DAKAVNKFFSENAFDAVMHFAAV-AYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
           +   +++   + + DA+ H A + +  GE   DP   Y    + T  +LE+  +H V+ +
Sbjct: 50  NRDEIDRAVEKYSIDAIFHLAGILSAKGEK--DPALAYKVNMNGTYNILEAAKQHRVEKV 107
Query: 192 IYSSTCATYG-EPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNV 250
           +  ST   +G E  K  +   T   P   +G  K  AE +   + +   + V  LRY  +
Sbjct: 108 VIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGI 167
Query: 251 IGSDPEGRLG 260
           I    E   G
Sbjct: 168 ISYKAEPTAG 177

>pdb|1RPN|A Chain A, Crystal Structure Of Gdp-D-Mannose 4,6-Dehydratase In Complexes With Gdp And Nadph Length = 335

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 4/165 (2%)
Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD 133
           LVTG  G  G++ A  LL+  YRV  +  ++R +      L+EL  E G +Q+   D+ D
Sbjct: 18  LVTGITGQDGAYLAKLLLEKGYRVHGL--VARRSSDTRWRLRELGIE-GDIQYEDGDMAD 74
Query: 134 AKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIY 193
           A +V +   +     V + AA ++VG S   P+            +LE++ +   +T  Y
Sbjct: 75  ACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFY 134
Query: 194 -SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN 237
            +ST   +G  +     E TP  P +PYG AK     I +++ ++
Sbjct: 135 QASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRES 179

>pdb|2X6T|A Chain A, Agme Bound To Adp-B-Mannose Length = 357

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 23/187 (12%)
Query: 73  VLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRG----NIGAVKVLQELFPEPGRLQF 126
           ++VTGGAG+IGS+  ++ L D     + +VDNL  G    N+  + +   +  E   +Q 
Sbjct: 49  IIVTGGAGFIGSNI-VKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQI 107
Query: 127 IYAD-LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMAR 185
           +  +  GD +A+   F E A  +        + G+  +D     +N   +  ++   + R
Sbjct: 108 MAGEEFGDVEAI---FHEGACSSTTE-----WDGKYMMD-----NNYQYSKELLHYCLER 154
Query: 186 HGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMIL 245
                 +Y+S+ ATYG      I     + P+N +G +K + ++ +      ++  ++  
Sbjct: 155 E--IPFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPEANSQIVGF 212
Query: 246 RYFNVIG 252
           RYFNV G
Sbjct: 213 RYFNVYG 219

>pdb|1Z75|A Chain A, Crystal Structure Of Arna Dehydrogenase (decarboxylase) Domain, R619m Mutant Length = 358

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 18/190 (9%)
Query: 71  THVLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA 129
           T VL+ G  G+IG+H   RLL+ D Y V  +D      IG+  + +  F       F+  
Sbjct: 14  TRVLILGVNGFIGNHLTERLLREDHYEVYGLD------IGSDAISR--FLNHPHFHFVEG 65
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
           D+       ++  +   D V+   A+A   E T +PL+ +       L ++    ++   
Sbjct: 66  DISIHSEWIEYHVKKC-DVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-K 123
Query: 190 TLIYSSTCATYGEPEKMPITEETPQAPINP-------YGKAKKMAEDIILDFSKNSDMAV 242
            +I+ ST   YG        E+     + P       Y  +K++ + +I  + +   +  
Sbjct: 124 RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQF 183
Query: 243 MILRYFNVIG 252
            + R FN +G
Sbjct: 184 TLFRPFNWMG 193

>pdb|1U9J|A Chain A, Crystal Structure Of E. Coli Arna (Pmri) Decarboxylase Domain Length = 358

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 18/190 (9%)
Query: 71  THVLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA 129
           T VL+ G  G+IG+H   RLL+ D Y V  +D      IG+  + +  F       F+  
Sbjct: 14  TRVLILGVNGFIGNHLTERLLREDHYEVYGLD------IGSDAISR--FLNHPHFHFVEG 65
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
           D+       ++  +   D V+   A+A   E T +PL+ +       L ++    ++   
Sbjct: 66  DISIHSEWIEYHVKKC-DVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-K 123
Query: 190 TLIYSSTCATYGEPEKMPITEETPQAPINP-------YGKAKKMAEDIILDFSKNSDMAV 242
            +I+ ST   YG        E+     + P       Y  +K++ + +I  + +   +  
Sbjct: 124 RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQF 183
Query: 243 MILRYFNVIG 252
            + R FN +G
Sbjct: 184 TLFRPFNWMG 193

>pdb|1Z73|A Chain A, Crystal Structure Of E. Coli Arna Dehydrogenase (decarboxylase) Domain, S433a Mutant Length = 358

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 18/190 (9%)
Query: 71  THVLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA 129
           T VL+ G  G+IG+H   RLL+ D Y V  +D      IG+  + +  F       F+  
Sbjct: 14  TRVLILGVNGFIGNHLTERLLREDHYEVYGLD------IGSDAISR--FLNHPHFHFVEG 65
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
           D+       ++  +   D V+   A+A   E T +PL+ +       L ++    ++   
Sbjct: 66  DISIHSEWIEYHVKKC-DVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-K 123
Query: 190 TLIYSSTCATYGEPEKMPITEETPQAPINP-------YGKAKKMAEDIILDFSKNSDMAV 242
            +I+ ST   YG        E+     + P       Y  +K++ + +I  + +   +  
Sbjct: 124 RIIFPSTAEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQF 183
Query: 243 MILRYFNVIG 252
            + R FN +G
Sbjct: 184 TLFRPFNWMG 193

>pdb|1Z74|A Chain A, Crystal Structure Of E.Coli Arna Dehydrogenase (Decarboxylase) Domain, R619y Mutant Length = 358

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 18/190 (9%)
Query: 71  THVLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA 129
           T VL+ G  G+IG+H   RLL+ D Y V  +D      IG+  + +  F       F+  
Sbjct: 14  TRVLILGVNGFIGNHLTERLLREDHYEVYGLD------IGSDAISR--FLNHPHFHFVEG 65
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
           D+       ++  +   D V+   A+A   E T +PL+ +       L ++    ++   
Sbjct: 66  DISIHSEWIEYHVKKC-DVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-K 123
Query: 190 TLIYSSTCATYGEPEKMPITEETPQAPINP-------YGKAKKMAEDIILDFSKNSDMAV 242
            +I+ ST   YG        E+     + P       Y  +K++ + +I  + +   +  
Sbjct: 124 RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQF 183
Query: 243 MILRYFNVIG 252
            + R FN +G
Sbjct: 184 TLFRPFNWMG 193

>pdb|1Z7B|A Chain A, Crystal Structure Of E.Coli Arna Dehydrogenase (Decarboxylase) Domain, R619e Mutant Length = 358

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 18/190 (9%)
Query: 71  THVLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA 129
           T VL+ G  G+IG+H   RLL+ D Y V  +D      IG+  + +  F       F+  
Sbjct: 14  TRVLILGVNGFIGNHLTERLLREDHYEVYGLD------IGSDAISR--FLNHPHFHFVEG 65
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
           D+       ++  +   D V+   A+A   E T +PL+ +       L ++    ++   
Sbjct: 66  DISIHSEWIEYHVKKC-DVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-K 123
Query: 190 TLIYSSTCATYGEPEKMPITEETPQAPINP-------YGKAKKMAEDIILDFSKNSDMAV 242
            +I+ ST   YG        E+     + P       Y  +K++ + +I  + +   +  
Sbjct: 124 RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQF 183
Query: 243 MILRYFNVIG 252
            + R FN +G
Sbjct: 184 TLFRPFNWMG 193

>pdb|2GN4|A Chain A, Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehydratase In Complex With Nadph And Udp-Glcnac Length = 344

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 22/184 (11%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TGG G  G     ++L D+     +   SR  +   ++  E F +P R++F   D+ 
Sbjct: 24  ILITGGTGSFGKCFVRKVL-DTTNAKKIIVYSRDELKQSEMAME-FNDP-RMRFFIGDVR 80
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D + +N  ++    D  +H AA+ +V  +  +PL+           V+ +  ++ +  +I
Sbjct: 81  DLERLN--YALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVI 138
Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIIL---DFSKNSDMAVMILRYFN 249
             ST              +    PIN YG  K  ++ + +   +F  +S     ++RY N
Sbjct: 139 ALST--------------DKAANPINLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGN 184
Query: 250 VIGS 253
           V+GS
Sbjct: 185 VVGS 188

>pdb|1I24|A Chain A, High Resolution Crystal Structure Of The Wild-Type Protein Sqd1, With Nad And Udp-Glucose Length = 404

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 61/151 (40%), Gaps = 18/151 (11%)
Query: 71  THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP----------- 119
           + V+V GG GY G   AL L K +Y V IVDNL R        L+ L P           
Sbjct: 12  SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRW 71
Query: 120 ---EPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLK---YYHNIT 173
                  ++    D+ D + + + F     D+V+HF        S +D  +     HN  
Sbjct: 72  KALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNV 131
Query: 174 SNTLVVLESMARHGVDT-LIYSSTCATYGEP 203
             TL VL ++   G +  L+   T   YG P
Sbjct: 132 IGTLNVLFAIKEFGEECHLVKLGTMGEYGTP 162

>pdb|1Z7E|A Chain A, Crystal Structure Of Full Length Arna Length = 660

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 18/190 (9%)
Query: 71  THVLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA 129
           T VL+ G  G+IG+H   RLL+ D Y V  +D      IG+  + +  F       F+  
Sbjct: 316 TRVLILGVNGFIGNHLTERLLREDHYEVYGLD------IGSDAISR--FLNHPHFHFVEG 367
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
           D+       ++  +   D V+   A+A   E T +PL+ +       L ++    ++   
Sbjct: 368 DISIHSEWIEYHVKKC-DVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-K 425
Query: 190 TLIYSSTCATYGEPEKMPITEETPQAPINP-------YGKAKKMAEDIILDFSKNSDMAV 242
            +I+ ST   YG        E+     + P       Y  +K++ + +I  + +   +  
Sbjct: 426 RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQF 485
Query: 243 MILRYFNVIG 252
            + R FN +G
Sbjct: 486 TLFRPFNWMG 495

>pdb|1QRR|A Chain A, Crystal Structure Of Sqd1 Protein Complex With Nad And Udp- Glucose Length = 394

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 60/149 (40%), Gaps = 18/149 (12%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP------------- 119
           V+V GG GY G   AL L K +Y V IVDNL R        L+ L P             
Sbjct: 4   VMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKA 63
Query: 120 -EPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLK---YYHNITSN 175
                ++    D+ D + + + F     D+V+HF        S +D  +     HN    
Sbjct: 64  LTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIG 123
Query: 176 TLVVLESMARHGVDT-LIYSSTCATYGEP 203
           TL VL ++   G +  L+   T   YG P
Sbjct: 124 TLNVLFAIKEFGEECHLVKLGTMGEYGTP 152

>pdb|2BLL|A Chain A, Apo-Structure Of The C-Terminal Decarboxylase Domain Of Arna Length = 345

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/188 (22%), Positives = 78/188 (41%), Gaps = 18/188 (9%)
Query: 73  VLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           VL+ G  G+IG+H   RLL+ D Y V  +D      IG+  + +  F       F+  D+
Sbjct: 3   VLILGVNGFIGNHLTERLLREDHYEVYGLD------IGSDAISR--FLNHPHFHFVEGDI 54
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
                  ++  +   D V+   A+A   E T +PL+ +       L ++    ++    +
Sbjct: 55  SIHSEWIEYHVKKC-DVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRI 112
Query: 192 IYSSTCATYGEPEKMPITEETPQAPINP-------YGKAKKMAEDIILDFSKNSDMAVMI 244
           I+ ST   YG        E+     + P       Y  +K++ + +I  + +   +   +
Sbjct: 113 IFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTL 172
Query: 245 LRYFNVIG 252
            R FN +G
Sbjct: 173 FRPFNWMG 180

>pdb|1I2B|A Chain A, Crystal Structure Of Mutant T145a Sqd1 Protein Complex With Nad And Udp-SulfoquinovoseUDP-Glucose Length = 404

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 60/151 (39%), Gaps = 18/151 (11%)
Query: 71  THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP----------- 119
           + V+V GG GY G   AL L K +Y V IVDNL R        L+ L P           
Sbjct: 12  SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRW 71
Query: 120 ---EPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLK---YYHNIT 173
                  ++    D+ D + + + F     D+V+HF        S +D  +     HN  
Sbjct: 72  KALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNV 131
Query: 174 SNTLVVLESMARHGVDT-LIYSSTCATYGEP 203
             TL VL ++   G +  L+       YG P
Sbjct: 132 IGTLNVLFAIKEFGEECHLVKLGAMGEYGTP 162

>pdb|3M2P|A Chain A, The Crystal Structure Of Udp-N-Acetylglucosamine 4-Epimerase From Bacillus Cereus Length = 311

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/180 (21%), Positives = 79/180 (43%), Gaps = 19/180 (10%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           + VTGG G++G +  +  +K+     I+   S GN    K + +        ++  +D  
Sbjct: 5   IAVTGGTGFLGQYV-VESIKNDGNTPIILTRSIGN----KAINDY-------EYRVSDYT 52
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
               +N+    N  DAV+H AA       +   +  +H+    T  + ++   + +  ++
Sbjct: 53  LEDLINQL---NDVDAVVHLAAT----RGSQGKISEFHDNEILTQNLYDACYENNISNIV 105
Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIG 252
           Y+ST + Y +   +P  E+    P   YG +K   E I   +S+   + +  LR+ ++ G
Sbjct: 106 YASTISAYSDETSLPWNEKELPLPDLXYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYG 165

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	296
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	2e-96
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	9e-87
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	5e-82
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	3e-79
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	5e-78
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	1e-76
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	1e-75
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	1e-74
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	7e-74
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	8e-72
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	3e-57
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	3e-55
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	1e-53
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	5e-53
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	9e-53
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	2e-50
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	3e-49
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	9e-48
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	5e-45
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	9e-45
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	2e-43
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	7e-42
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	7e-42
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	1e-39
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	4e-39
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	1e-32
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	1e-27
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	1e-27
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	4e-27
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	8e-27
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	8e-27
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	9e-25
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	4e-21
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	6e-21
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	1e-19
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	1e-19
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	1e-19
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	2e-18
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	5e-18
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	5e-17
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	7e-17
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	5e-16
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	6e-15
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	2e-13
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	2e-13
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	4e-13
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	4e-12
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	2e-11
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	3e-11
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	4e-11
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	3e-10
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	7e-10
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	1e-09
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	1e-09
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	3e-09
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	3e-09
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	5e-09
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	8e-09
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	2e-08
1xq6_A	253	Unknown protein; structural genomics, protein stru	5e-08
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	6e-07
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	1e-06
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	2e-06
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	1e-05
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	2e-05
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	3e-05
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	5e-05
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	6e-05
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	7e-05
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	7e-05
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	8e-05
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	1e-04
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	1e-04
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	2e-04
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	2e-04
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	2e-04
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	2e-04
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	2e-04
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	2e-04
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	2e-04
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	3e-04
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	3e-04
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	4e-04
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	4e-04
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	5e-04
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	5e-04
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	5e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	5e-04
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	6e-04
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	6e-04
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	7e-04
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	7e-04
1xkq_A	280	Short-chain reductase family member (5D234); parra	8e-04
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	8e-04
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	8e-04

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330

 Score =  286 bits (734), Expect = 2e-96
 Identities = 81/194 (41%), Positives = 109/194 (56%), Gaps = 9/194 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+ GGAGYIGSHA  +L+ +   V +VDNL  G+  A+             +F   DL 
Sbjct: 4   ILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAI---------TEGAKFYNGDLR 54

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D   +   F++   +AVMHFAA + VG S   PL+YY+N     L +LE M    VD  I
Sbjct: 55  DKAFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFI 114

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIG 252
           +SST ATYGE +   ITEET   P N YG+ K   E ++  +S+ S++   I RYFNV G
Sbjct: 115 FSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAG 174

Query: 253 SDPEGRLGEAPRPE 266
           + P G +GE  RPE
Sbjct: 175 ATPNGIIGEDHRPE 188

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397

 Score =  264 bits (676), Expect = 9e-87
 Identities = 71/217 (32%), Positives = 106/217 (48%), Gaps = 23/217 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVL--------------QEL 117
           VLV GGAGYIGSH    LL+D+ + V IVD+L   +  +  V                + 
Sbjct: 5   VLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKP 64

Query: 118 FPEPGRLQFIYADLGDAKAVNKFFSENA-FDAVMHFAAVAYVGESTLDPLKYYHNITSNT 176
                       D+ +   +N  F+ +   DAV+H  A   VGES  DPLKYY N     
Sbjct: 65  PWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGI 124

Query: 177 LVVLESMARHGVDTLIYSSTCATYGEP-------EKMPITEETPQAPINPYGKAKKMAED 229
           L +L++M  H  D +I+SS+ A +G P          PI     ++P +PYG++K +AE 
Sbjct: 125 LRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAER 184

Query: 230 IILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPE 266
           +I D ++   +  + LRYFN  G+  +G +GE  +  
Sbjct: 185 MIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGS 221

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score =  249 bits (639), Expect = 5e-82
 Identities = 53/211 (25%), Positives = 86/211 (40%), Gaps = 22/211 (10%)

Query: 59  SPSPFSQHEEGVT------HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVK 112
           S      H  G+        +L+TGGAG +GS+     L   + + ++DN + G    + 
Sbjct: 3   SSHHHHHHSSGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVL- 61

Query: 113 VLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNI 172
                 P    L  I   + DA  + + F       V+H AA     +   D  +     
Sbjct: 62  ------PPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAAAYKDPD---DWAEDAATN 112

Query: 173 TSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIIL 232
              ++ V ++ ++ GV  L+   T   YG P  +PI  ++P AP   YG +K   E  ++
Sbjct: 113 VQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLM 172

Query: 233 DFSKNSDMAVMILRYFNVIGSDPEGRLGEAP 263
                 D+ V+ LR  NV G  P   +G  P
Sbjct: 173 MS----DVPVVSLRLANVTG--PRLAIGPIP 197

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341

 Score =  243 bits (622), Expect = 3e-79
 Identities = 76/194 (39%), Positives = 106/194 (54%), Gaps = 5/194 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
           +LVTGGAGYIGSH A+ LL   Y V I DNL      A+  ++++    G    F   D+
Sbjct: 8   ILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKI---TGKTPAFHETDV 64

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            D +A+ + F  +   A +HFAA+  VGES   P++YY N   + L +L  M    V  +
Sbjct: 65  SDERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRI 124

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNV 250
           ++SS+   YG PE+ PI E  P +  NPYG+ K MAE I+ D    +    V  LRYFN 
Sbjct: 125 VFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQILRDVEAADPSWRVATLRYFNP 184

Query: 251 IGSDPEGRLGEAPR 264
           +G+   G +GE P 
Sbjct: 185 VGAHESGLIGEDPA 198

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* Length = 338

 Score =  239 bits (613), Expect = 5e-78
 Identities = 75/195 (38%), Positives = 113/195 (57%), Gaps = 6/195 (3%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L    G    F+  D+
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL---GGKHPTFVEGDI 59

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   
Sbjct: 60  RNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNF 119

Query: 192 IYSSTCATYGEPEKMPITEETP-QAPINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFN 249
           I+SS+   YG+  K+P  E  P   P +PYGK+K M E I+ D  K   D ++ +LRYFN
Sbjct: 120 IFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFN 179

Query: 250 VIGSDPEGRLGEAPR 264
            +G+ P G +GE P+
Sbjct: 180 PVGAHPSGDMGEDPQ 194

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score =  235 bits (602), Expect = 1e-76
 Identities = 66/196 (33%), Positives = 92/196 (46%), Gaps = 17/196 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGGAG+IGSH    LL     V ++DNL+ G    V         P  + F   DL 
Sbjct: 3   VLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENV---------PKGVPFFRVDLR 53

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D + V + F E     V H AA A V  S  DP+  +       L +LE+  ++GV+ L+
Sbjct: 54  DKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLV 113

Query: 193 YSST-CATYGE-PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNV 250
           ++ST  A YGE PE     E  P  P +PY  +K   E  +  + ++  +  + LRY NV
Sbjct: 114 FASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNV 173

Query: 251 IGSDPEGRLGEAPRPE 266
            G        + P  E
Sbjct: 174 YGP------RQDPHGE 183

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score =  232 bits (595), Expect = 1e-75
 Identities = 61/201 (30%), Positives = 96/201 (47%), Gaps = 13/201 (6%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           ++VTGGAG+IGSH   +L++  Y V +VDNLS G    V             +    DL 
Sbjct: 3   IVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV---------NPSAELHVRDLK 53

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D             D V HFAA   V  ST +P+ +++     T  VLE   + GV T++
Sbjct: 54  DYSWGAGIK----GDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVV 109

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIG 252
           ++S+   YG+ + +P  EE P  PI+ YG AK   E +   +++   +  + +RY NV+G
Sbjct: 110 FASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVG 169

Query: 253 SDPEGRLGEAPRPELREHGRI 273
                 +      +LR +  +
Sbjct: 170 PRLRHGVIYDFIMKLRRNPNV 190

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348

 Score =  231 bits (591), Expect = 1e-74
 Identities = 77/201 (38%), Positives = 112/201 (55%), Gaps = 12/201 (5%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS------RGNIGAVKVLQELFPEPG-RLQ 125
           VLVTGGAGYIGSH  L LL+  Y   ++DN             +++ +QEL    G  ++
Sbjct: 5   VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL---TGRSVE 61

Query: 126 FIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMAR 185
           F   D+ D  A+ + F + +F AV+HFA +  VGES   PL YY    + T+ +LE M  
Sbjct: 62  FEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKA 121

Query: 186 HGVDTLIYSSTCATYGEPEKMPITEETP-QAPINPYGKAKKMAEDIILDFSK-NSDMAVM 243
           HGV  L++SS+   YG P+ +P+ E  P     NPYGK+K   E++I D  + +     +
Sbjct: 122 HGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAV 181

Query: 244 ILRYFNVIGSDPEGRLGEAPR 264
           +LRYFN  G+   G +GE P+
Sbjct: 182 LLRYFNPTGAHASGCIGEDPQ 202

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score =  228 bits (583), Expect = 7e-74
 Identities = 58/181 (32%), Positives = 87/181 (48%), Gaps = 13/181 (7%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            ++VTGGAG+IGSH   +L +    + ++DNLS GN   V             + + ADL
Sbjct: 3   LIVVTGGAGFIGSHVVDKLSES-NEIVVIDNLSSGNEEFV---------NEAARLVKADL 52

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
                 +        + V H AA   V     +P + Y N    T  +LE+M + GV  +
Sbjct: 53  AADDIKDYLKG---AEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRI 109

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVI 251
           +++ST   YGE + +P  E+ P  PI+ YG +K   E +I  +    DM   I R+ NVI
Sbjct: 110 VFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFDMQAWIYRFANVI 169

Query: 252 G 252
           G
Sbjct: 170 G 170

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699

 Score =  233 bits (596), Expect = 8e-72
 Identities = 84/198 (42%), Positives = 110/198 (55%), Gaps = 8/198 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGGAGYIGSH  + L+++ Y   + DNLS     +V  L+ L      + F   DL 
Sbjct: 14  VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKH--HIPFYEVDLC 71

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D K + K F E   D+V+HFA +  VGEST  PL+YYHN    T+V+LE M ++ V   +
Sbjct: 72  DRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFV 131

Query: 193 YSSTCATYGE----PEKMPITEETPQAPINPYGKAKKMAEDIILDFSK--NSDMAVMILR 246
           +SS+   YG+    P  +PI EE P  P NPYG  K   E+I+ D            ILR
Sbjct: 132 FSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILR 191

Query: 247 YFNVIGSDPEGRLGEAPR 264
           YFN IG+ P G +GE P 
Sbjct: 192 YFNPIGAHPSGLIGEDPL 209

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score =  188 bits (478), Expect = 3e-57
 Identities = 53/216 (24%), Positives = 76/216 (35%), Gaps = 31/216 (14%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG--------- 122
            V+V GG GY G   AL L K +Y V IVDNL R        L+ L P            
Sbjct: 13  RVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWK 72

Query: 123 -----RLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDP---LKYYHNITS 174
                 ++    D+ D + + + F     D+V+HF        S +D    +   HN   
Sbjct: 73  ALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVI 132

Query: 175 NTLVVLESMARHGVDT-LIYSSTCATYGEPEK------MPITEE-------TPQAPINPY 220
            TL VL ++   G +  L+   T   YG P        + IT          P+   + Y
Sbjct: 133 GTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFY 192

Query: 221 GKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPE 256
             +K      I    K   +    L    V G   +
Sbjct: 193 HLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTD 228

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score =  181 bits (461), Expect = 3e-55
 Identities = 48/224 (21%), Positives = 81/224 (36%), Gaps = 31/224 (13%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRGNIGAVKVLQELFPEPGRL 124
           H+ + G AG +G     RL+KD         + T++D                    G +
Sbjct: 16  HIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGF---------SGAV 66

Query: 125 QFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMA 184
               ADL       K   E   D + H AA+   GE+ LD  K Y      T  + +++ 
Sbjct: 67  DARAADLSAPGEAEKLV-EARPDVIFHLAAIV-SGEAELDFDKGYRINLDGTRYLFDAIR 124

Query: 185 RHGVDT-----LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSD 239
                      ++++S+ A +G P   PI +E    P+  YG  K + E ++ D+S+   
Sbjct: 125 IANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGF 184

Query: 240 MAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARG 283
              + +R   +      G+   A        G  S    +   G
Sbjct: 185 FDGIGIRLPTICI--RPGKPNAA------ASGFFSNILREPLVG 220

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score =  176 bits (449), Expect = 1e-53
 Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 24/197 (12%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V +TG  G IGSH A  LL+   +V  +DN + G    +        +   L F+   + 
Sbjct: 24  VFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHL-------KDHPNLTFVEGSIA 76

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMARHGVD 189
           D   VN+   +   DAV+H AA          P  +Y++  +N      V+++  ++ V 
Sbjct: 77  DHALVNQLIGDLQPDAVVHTAASYKD------PDDWYNDTLTNCVGGSNVVQAAKKNNVG 130

Query: 190 TLIYSSTCATYG-EPEKMPITEETPQAPIN-PYGKAKKMAEDIILDFSKNSDMAVMILRY 247
             +Y  T   YG +P + P+  + P+ P N  Y  +K   E    D+ + S +  +  R 
Sbjct: 131 RFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANE----DYLEYSGLDFVTFRL 186

Query: 248 FNVIGSDPEGRLGEAPR 264
            NV+G  P    G  P 
Sbjct: 187 ANVVG--PRNVSGPLPI 201

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score =  174 bits (444), Expect = 5e-53
 Identities = 34/188 (18%), Positives = 66/188 (35%), Gaps = 21/188 (11%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            + VTGG G++G +    +  D     I+                       +      +
Sbjct: 4   KIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNK---------------AINDYEYRV 48

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            D    +     N  DAV+H AA         +    + N    T  + ++   + +  +
Sbjct: 49  SDYTLEDLINQLNDVDAVVHLAATRGSQGKISEF---HDNEIL-TQNLYDACYENNISNI 104

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVI 251
           +Y+ST + Y +   +P  E+    P   YG +K   E I   +S+   + +  LR+ ++ 
Sbjct: 105 VYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLY 164

Query: 252 G--SDPEG 257
           G       
Sbjct: 165 GFNEKNNY 172

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score =  175 bits (445), Expect = 9e-53
 Identities = 60/191 (31%), Positives = 91/191 (47%), Gaps = 10/191 (5%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG---NIGAVKVLQELFPEPGRLQFIYA 129
            L+TG AG+IGS+    LLK   +V  +DN + G   N+  V+ L          +FI  
Sbjct: 30  WLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWS-NFKFIQG 88

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGV 188
           D+ +    N   +    D V+H AA+  V  S  DP+     NI    L +L +     V
Sbjct: 89  DIRNLDDCNNACAG--VDYVLHQAALGSVPRSINDPITSNATNIDG-FLNMLIAARDAKV 145

Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYF 248
            +  Y+++ +TYG+   +P  E+T   P++PY   K + E     FS+    + + LRYF
Sbjct: 146 QSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYF 205

Query: 249 NVIG--SDPEG 257
           NV G   DP G
Sbjct: 206 NVFGRRQDPNG 216

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score =  169 bits (430), Expect = 2e-50
 Identities = 62/192 (32%), Positives = 91/192 (47%), Gaps = 10/192 (5%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG---NIGAVKVLQELFPEPGRLQFIY 128
             L+TG AG+IGS+   +LLK +  V  +DN S G   N+  VK L        R  FI 
Sbjct: 27  TWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWS-RFCFIE 85

Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHG 187
            D+ D     +       D V+H AA+  V  S +DP+     NIT   L +L +     
Sbjct: 86  GDIRDLTTCEQVMKG--VDHVLHQAALGSVPRSIVDPITTNATNITG-FLNILHAAKNAQ 142

Query: 188 VDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRY 247
           V +  Y+++ +TYG+   +P  EE    P++PY   K + E     +++      + LRY
Sbjct: 143 VQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYGFKTIGLRY 202

Query: 248 FNVIG--SDPEG 257
           FNV G   DP G
Sbjct: 203 FNVFGRRQDPNG 214

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score =  165 bits (419), Expect = 3e-49
 Identities = 54/188 (28%), Positives = 84/188 (44%), Gaps = 17/188 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TGGAG+IG H A  L+     VT++D+L    +   +   +   +P   +    DL 
Sbjct: 10  ILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVL-ELEERDLS 68

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D               V H A+   V  S   PL Y  N+ S    +L      GV  ++
Sbjct: 69  D------------VRLVYHLASHKSVPRSFKQPLDYLDNVDS-GRHLLALCTSVGVPKVV 115

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM-AVMILRYFNVI 251
             STC  YG+ + +P  E++P +P +PY  +K   E +     + S    V I+R+FNV 
Sbjct: 116 VGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVY 175

Query: 252 G--SDPEG 257
           G    P+ 
Sbjct: 176 GPGERPDA 183

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score =  159 bits (405), Expect = 9e-48
 Identities = 44/188 (23%), Positives = 74/188 (39%), Gaps = 21/188 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTG AG +GS     L   ++ V + D +  G                  + +  DL 
Sbjct: 5   LLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA------------AEAHEEIVACDLA 52

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           DA+AV+    +   D ++H   V  V     D L+   NI      + E+    G   ++
Sbjct: 53  DAQAVHDLVKD--CDGIIHLGGV-SVERPWNDILQ--ANIIG-AYNLYEAARNLGKPRIV 106

Query: 193 YSSTCATYGE-PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVI 251
           ++S+  T G  P    I  E P+ P + YG +K   ED+   +    D+  + +R  +  
Sbjct: 107 FASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKFDIETLNIRIGSCF 166

Query: 252 G--SDPEG 257
               D   
Sbjct: 167 PKPKDARM 174

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score =  153 bits (390), Expect = 5e-45
 Identities = 44/193 (22%), Positives = 79/193 (40%), Gaps = 21/193 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRG----NIGAVKVLQELFPEPGRLQFI 127
           ++VTGGAG+IGS+    L       + +VDNL  G    N+  + +   +  E       
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKE------- 54

Query: 128 YADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG 187
             D        + F +   +A+ H  A +   E     +   +N    +  +L       
Sbjct: 55  --DFLIQIMAGEEFGD--VEAIFHEGACSSTTEWDGKYM-MDNNYQY-SKELLHYCLERE 108

Query: 188 VDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRY 247
           +   +Y+S+ ATYG      I     + P+N YG +K + ++ +      ++  ++  RY
Sbjct: 109 IP-FLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRY 167

Query: 248 FNVIG--SDPEGR 258
           FNV G     +G 
Sbjct: 168 FNVYGPREGHKGS 180

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score =  153 bits (388), Expect = 9e-45
 Identities = 42/190 (22%), Positives = 82/190 (43%), Gaps = 20/190 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIV-DNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           +LVTG +G IG+     L +   +  ++  ++ + +              G ++FI  D+
Sbjct: 2   ILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRD-------------TGGIKFITLDV 48

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGVDT 190
            +   +++   + + DA+ H A +    +   DP   Y  N+   T  +LE+  +H V+ 
Sbjct: 49  SNRDEIDRAVEKYSIDAIFHLAGILSA-KGEKDPALAYKVNMNG-TYNILEAAKQHRVEK 106

Query: 191 LIYSSTCATYG-EPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFN 249
           ++  ST   +G E  K  +   T   P   +G  K  AE +   + +   + V  LRY  
Sbjct: 107 VVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPG 166

Query: 250 VIG--SDPEG 257
           +I   ++P  
Sbjct: 167 IISYKAEPTA 176

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score =  150 bits (382), Expect = 2e-43
 Identities = 43/189 (22%), Positives = 76/189 (40%), Gaps = 13/189 (6%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           ++VTGGAG+IGS+    L       + +VDNL  G       L +L            D 
Sbjct: 49  IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT--KFVNLVDLNI---ADYMDKEDF 103

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
                  + F +   +A+ H  A +   E     +   +N    +  +L       +   
Sbjct: 104 LIQIMAGEEFGD--VEAIFHEGACSSTTEWDGKYM-MDNNYQY-SKELLHYCLEREI-PF 158

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVI 251
           +Y+S+ ATYG      I     + P+N +G +K + ++ +      ++  ++  RYFNV 
Sbjct: 159 LYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVY 218

Query: 252 G--SDPEGR 258
           G     +G 
Sbjct: 219 GPREGHKGS 227

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score =  144 bits (365), Expect = 7e-42
 Identities = 40/183 (21%), Positives = 68/183 (37%), Gaps = 23/183 (12%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTG AG +G     RL   +  + + D            L  L P     + +  DL 
Sbjct: 6   LLVTGAAGQLGRVMRERLAPMAEILRLAD------------LSPLDPAGPNEECVQCDLA 53

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH--NITSNTLVVLESMARHGVDT 190
           DA AVN   +    D ++H         S   P +     NI      + E+   HG   
Sbjct: 54  DANAVNAMVAG--CDGIVHLGG-----ISVEKPFEQILQGNIIG-LYNLYEAARAHGQPR 105

Query: 191 LIYSSTCATYGE-PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFN 249
           ++++S+  T G  P+   +  + P  P   YG +K   E++   +         ++R  +
Sbjct: 106 IVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFDKFGQETALVRIGS 165

Query: 250 VIG 252
              
Sbjct: 166 CTP 168

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score =  145 bits (368), Expect = 7e-42
 Identities = 35/190 (18%), Positives = 64/190 (33%), Gaps = 17/190 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           +L+ G  G IG+    +L K       I  ++ + N   V              F   + 
Sbjct: 5   ILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVN----------SGPFEVVNA 54

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGVDT 190
            D   +      +    +   AA+     +  +P   +  N+ S    VL       +  
Sbjct: 55  LDFNQIEHLVEVHKITDIYLMAALLSA-TAEKNPAFAWDLNMNS-LFHVLNLAKAKKIKK 112

Query: 191 LIYSSTCATYGEPEKMPITEE-TPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFN 249
           + + S+ A +G       T + T   P   YG +K+  E     +     + V  +RY  
Sbjct: 113 IFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYYHNIYGVDVRSIRYPG 172

Query: 250 VIG--SDPEG 257
           +I   + P G
Sbjct: 173 LISWSTPPGG 182

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score =  141 bits (358), Expect = 1e-39
 Identities = 48/201 (23%), Positives = 80/201 (39%), Gaps = 17/201 (8%)

Query: 60  PSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELF 118
           P   +  +   T+V+V GGAG++GS+   RLL+    +V +VDNL       V       
Sbjct: 22  PVIMNASKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINV------- 74

Query: 119 PEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLV 178
           P+   ++F    + D   +     E  +D V H A       S  DPL  + N T  TL 
Sbjct: 75  PDHPAVRFSETSITDDALLASLQDE--YDYVFHLATYHGNQSSIHDPLADHENNTLTTLK 132

Query: 179 VLESMARH-GVDTLIYSSTCATYGEPEKMPITEE------TPQAPINPYGKAKKMAEDII 231
           + E +     +  ++YS+   +  E               +     +PY  +K   E   
Sbjct: 133 LYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYS 192

Query: 232 LDFSKNSDMAVMILRYFNVIG 252
           + + K   +  +  R+ NV G
Sbjct: 193 VYYHKQHQLPTVRARFQNVYG 213

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score =  139 bits (353), Expect = 4e-39
 Identities = 44/194 (22%), Positives = 81/194 (41%), Gaps = 15/194 (7%)

Query: 73  VLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFP----EPGRLQF 126
           +L+TGGAG++GS+ A    ++    +V ++D      + +      L         + + 
Sbjct: 13  ILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEV 72

Query: 127 IYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH 186
           I AD+ +   + +    + FD + H AAV+       +            L +LE     
Sbjct: 73  IAADINNPLDLRRLEKLH-FDYLFHQAAVSDTTML--NQELVMKTNYQAFLNLLEIARSK 129

Query: 187 GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
               +IY+S+   YG  +  P      ++P N YG +K   ++ +L  S ++      LR
Sbjct: 130 KAK-VIYASSAGVYGNTK-APNVVGKNESPENVYGFSKLCMDEFVLSHSNDNVQV--GLR 185

Query: 247 YFNVIG--SDPEGR 258
           YFNV G     + +
Sbjct: 186 YFNVYGPREFYKEK 199

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score =  122 bits (308), Expect = 1e-32
 Identities = 41/198 (20%), Positives = 77/198 (38%), Gaps = 27/198 (13%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           + +TG  G+I SH A RL  + + V   D     ++       E        +F   DL 
Sbjct: 32  ISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM------TEDMFCD---EFHLVDLR 82

Query: 133 DAKAVNKFFSENAFDAVMHFAAVA----YVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
             +   K       D V + AA      ++     +     +N T  +  ++E+   +G+
Sbjct: 83  VMENCLKVTEG--VDHVFNLAADMGGMGFIQS---NHSVIMYNNTMISFNMIEAARINGI 137

Query: 189 DTLIYSSTCATYGEPEKMPITEET-------PQAPINPYGKAKKMAEDIILDFSKNSDMA 241
               Y+S+   Y E +++  T  +       P  P + +G  K   E++   ++K+  + 
Sbjct: 138 KRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIE 197

Query: 242 VMILRYFNVIGSDPEGRL 259
             I R+ N+ G  P G  
Sbjct: 198 CRIGRFHNIYG--PFGTW 213

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347

 Score =  108 bits (273), Expect = 1e-27
 Identities = 49/196 (25%), Positives = 91/196 (46%), Gaps = 24/196 (12%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR-GNIGAVKVLQELFPEPGRLQFIYADL 131
           +L+TGG G++GS+ A   L     + + DNLSR G    +  L  L    G  +F++ D+
Sbjct: 4   LLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL----GNFEFVHGDI 59

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGVDT 190
            +   V +  ++   D+  H A    +  S  +P   +  N+   TL +LE++ ++  + 
Sbjct: 60  RNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGG-TLNLLEAVRQYNSNC 118

Query: 191 -LIYSSTCATYGEPEKMPI----------------TEETPQAPINPYGKAKKMAEDIILD 233
            +IYSST   YG+ E+                    E T     +PYG +K  A+  +LD
Sbjct: 119 NIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLD 178

Query: 234 FSKNSDMAVMILRYFN 249
           +++   +  ++ R+ +
Sbjct: 179 YARIFGLNTVVFRHSS 194

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372

 Score =  109 bits (273), Expect = 1e-27
 Identities = 39/188 (20%), Positives = 75/188 (39%), Gaps = 17/188 (9%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            VL+ G  G+IG H + R+L+ +       ++    +       +L     R+ F   D+
Sbjct: 26  KVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRL------GDLVKHE-RMHFFEGDI 78

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
              K   ++  +   D ++   A+A        PL+ +       L ++ S  ++G   L
Sbjct: 79  TINKEWVEYHVKK-CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGK-HL 136

Query: 192 IYSSTCATYG---EPEKMPITEETPQAPINP----YGKAKKMAEDIILDFSKNSDMAVMI 244
           ++ ST   YG   + +  P        PIN     Y  +K++ + +I  +     +   +
Sbjct: 137 VFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGME-GLNFTL 195

Query: 245 LRYFNVIG 252
            R FN IG
Sbjct: 196 FRPFNWIG 203

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score =  107 bits (269), Expect = 4e-27
 Identities = 27/192 (14%), Positives = 58/192 (30%), Gaps = 51/192 (26%)

Query: 73  VLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           +++TG  G++G +    L     + +  V   +                           
Sbjct: 3   IVITGAKGFVGKNLKADLTSTTDHHIFEVHRQT--------------------------- 35

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
              + +     +   D ++H A V           ++     S    VL+ + R+     
Sbjct: 36  -KEEELESALLK--ADFIVHLAGVNRP----EHDKEFSLGNVSYLDHVLDILTRNTKKPA 88

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVI 251
           I  S+                     NPYG++K   E ++ ++++     V I R+ N+ 
Sbjct: 89  ILLSS--------------SIQATQDNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLF 134

Query: 252 GSDPEGRLGEAP 263
           G     +     
Sbjct: 135 G--KWCKPNYNS 144

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score =  106 bits (266), Expect = 8e-27
 Identities = 28/186 (15%), Positives = 60/186 (32%), Gaps = 21/186 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
             V G  G +G HAA  +    + + +   + R     ++ L  L       +   A++ 
Sbjct: 16  YAVLGATGLLGHHAARAIRAAGHDLVL---IHR-PSSQIQRLAYL-----EPECRVAEML 66

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGVDTL 191
           D   + +       D V+  A             +     +   T     +  +  V  +
Sbjct: 67  DHAGLERALRG--LDGVIFSAGY--YPSRPRRWQEEVASALGQ-TNPFYAACLQARVPRI 121

Query: 192 IYSSTCATYGE-PEKMPITEETPQAP----INPYGKAKKMAEDIILDFSKNSDMAVMILR 246
           +Y  +       P+ +P  E           + Y   K   ++   + ++N  + V+I  
Sbjct: 122 LYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARN-GLPVVIGI 180

Query: 247 YFNVIG 252
              V+G
Sbjct: 181 PGMVLG 186

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345

 Score =  106 bits (266), Expect = 8e-27
 Identities = 40/188 (21%), Positives = 75/188 (39%), Gaps = 18/188 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           VL+ G  G+IG+H   RLL++  Y V  +D  S         +      P    F+  D+
Sbjct: 3   VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDA-------ISRFLNHP-HFHFVEGDI 54

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
                  ++  +   D V+   A+A   E T +PL+ +       L ++    ++    +
Sbjct: 55  SIHSEWIEYHVKKC-DVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRK-RI 112

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINP-------YGKAKKMAEDIILDFSKNSDMAVMI 244
           I+ ST   YG        E+     + P       Y  +K++ + +I  + +   +   +
Sbjct: 113 IFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTL 172

Query: 245 LRYFNVIG 252
            R FN +G
Sbjct: 173 FRPFNWMG 180

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343

 Score =  100 bits (252), Expect = 9e-25
 Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 17/186 (9%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            +L+TGGAG++GSH   +L+ D + VT+VDN   G     + ++         + I  D+
Sbjct: 29  RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRK---RNVEHWIGHE-NFELINHDV 84

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
                V   + E   D + H A+ A       +P+K     T  TL +L    R G   L
Sbjct: 85  -----VEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RL 136

Query: 192 IYSSTCATYGEPEKMPITEE-----TPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
           + +ST   YG+PE  P +E+      P  P   Y + K++AE +   + K   + V + R
Sbjct: 137 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 196

Query: 247 YFNVIG 252
            FN  G
Sbjct: 197 IFNTFG 202

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} Length = 346

 Score = 90.7 bits (226), Expect = 4e-21
 Identities = 45/164 (27%), Positives = 84/164 (51%), Gaps = 15/164 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLK--DSYRVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIYA 129
           +LVTGGAG+IGS+    +L+  ++Y++   D L+  GN+     ++ +   P    F+  
Sbjct: 27  ILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNN---VKSIQDHP-NYYFVKG 82

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMARH 186
           ++ + + +     E     +++FAA ++V  S  +P+ +     +N   T+ +LE + ++
Sbjct: 83  EIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPF---YDTNVIGTVTLLELVKKY 139

Query: 187 GVDTLIYSSTCATYGE-PEKMPITEETPQAPINPYGKAKKMAED 229
               L+  ST   YG   +    TEETP AP +PY  + K + D
Sbjct: 140 PHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPY-SSSKASAD 182

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* Length = 337

 Score = 89.9 bits (224), Expect = 6e-21
 Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 20/168 (11%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDS------YRVTIVDNLS-RGNIGAVKVLQELFPEPGRL 124
            +LVTGGAG+IGSH   +LL  +        V ++D+L+  GN      L  +  +P RL
Sbjct: 2   RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRAN---LAPVDADP-RL 57

Query: 125 QFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLE 181
           +F++ D+ DA  + +       DA++HFAA ++V  S      +     +N   T  +L+
Sbjct: 58  RFVHGDIRDAGLLARELRG--VDAIVHFAAESHVDRSIAGASVF---TETNVQGTQTLLQ 112

Query: 182 SMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED 229
                GV  +++ ST   YG  +    TE +P  P +PY  A K   D
Sbjct: 113 CAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYA-ASKAGSD 159

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* Length = 348

 Score = 86.8 bits (216), Expect = 1e-19
 Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 23/164 (14%)

Query: 72  HVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIY 128
           +++VTGGAG+IGS+    +  +     VT++D L+  GN   ++ +        R++ + 
Sbjct: 6   NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI-----LGDRVELVV 60

Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHG 187
            D+ DA+ V+K  ++   DA++H+AA ++   S  DP  + H N    T  +LE+  ++ 
Sbjct: 61  GDIADAELVDKLAAK--ADAIVHYAAESHNDNSLNDPSPFIHTNFIG-TYTLLEAARKYD 117

Query: 188 V-------D----TLIYSSTCATYGEPEKMPITEETPQAPINPY 220
           +       D     L        +GE      T ET   P +PY
Sbjct: 118 IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPY 161

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 84.4 bits (209), Expect = 1e-19
 Identities = 35/223 (15%), Positives = 72/223 (32%), Gaps = 27/223 (12%)

Query: 68  EGVTHVLVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEPGRLQF 126
           E V  +++ G +G++GS      L   + VT +V +  +           +  E   L+ 
Sbjct: 2   EKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEK-----------IKIENEHLKV 50

Query: 127 IYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH 186
             AD+     V +       DAV+      +      D            L +++ + + 
Sbjct: 51  KKADVSSLDEVCEVC--KGADAVISAFNPGWNNPDIYDET------IKVYLTIIDGVKKA 102

Query: 187 GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
           GV+  +      +      + +  ++ + P N     K + E  +    K  ++  +   
Sbjct: 103 GVNRFLMVGGAGSLFIAPGLRLM-DSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFS 161

Query: 247 YFNVIGSDPEG---RLGEAPRPELREHG-RISGACFDAARGII 285
               +         RLG+            IS    D A  +I
Sbjct: 162 PAADMRPGVRTGRYRLGKDDMIVDIVGNSHISVE--DYAAAMI 202

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} Length = 336

 Score = 86.0 bits (214), Expect = 1e-19
 Identities = 51/165 (30%), Positives = 77/165 (46%), Gaps = 17/165 (10%)

Query: 72  HVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIY 128
            +LVTGG G+IGS+    +L+    + V  +D L    N   +K L++   +P R  F+ 
Sbjct: 5   KLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLED---DP-RYTFVK 60

Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMAR 185
            D+ D + V +   +   D V+H AA ++V  S   P  +   + SN   T  +LES+ R
Sbjct: 61  GDVADYELVKELVRK--VDGVVHLAAESHVDRSISSPEIF---LHSNVIGTYTLLESIRR 115

Query: 186 HGVDTLIYS-STCATYGEPEKMPITEETPQAPINPYGKAKKMAED 229
              +      ST   YG+  K   TE     P +PY  A K A D
Sbjct: 116 ENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPY-SATKAASD 159

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* Length = 361

 Score = 83.3 bits (207), Expect = 2e-18
 Identities = 54/183 (29%), Positives = 80/183 (43%), Gaps = 34/183 (18%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIYA 129
            +L+TGGAG+IGS     ++K++   V  +D L+  GN+ +   L ++     R  F +A
Sbjct: 2   KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLES---LSDISESN-RYNFEHA 57

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMARH 186
           D+ D+  + + F +   DAVMH AA ++V  S   P  +   I +N   T  +LE  AR 
Sbjct: 58  DICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAF---IETNIVGTYALLEV-ARK 113

Query: 187 GVDTLIYS----------STCATYG----------EPEKMPITEETPQAPINPYGKAKKM 226
               L             ST   YG                 TE T  AP +PY  A K 
Sbjct: 114 YWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPY-SASKA 172

Query: 227 AED 229
           + D
Sbjct: 173 SSD 175

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score = 81.9 bits (203), Expect = 5e-18
 Identities = 46/205 (22%), Positives = 69/205 (33%), Gaps = 56/205 (27%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRV-TIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           V VTG +G+IGS   +RLL+  Y V   V + +      VK L +L      L    ADL
Sbjct: 8   VCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVK--KVKHLLDLPKAETHLTLWKADL 65

Query: 132 GDAKAVNKFFSENAFDA-------VMHFAAVAYVGESTLDPLKYYHNITSN--------- 175
            D         E +FD        V H A           P                   
Sbjct: 66  AD---------EGSFDEAIKGCTGVFHVAT----------P--MDFESKDPENEVIKPTI 104

Query: 176 --TLVVLESMARHG-VDTLIYSSTCAT--YGEPEKMPITE---------ETPQAPINPYG 221
              L +++S A    V  L+++S+  T    E +     E            +     Y 
Sbjct: 105 EGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYF 164

Query: 222 KAKKMAEDIILDFSKNS--DMAVMI 244
            +K +AE     ++K +  D   +I
Sbjct: 165 VSKTLAEQAAWKYAKENNIDFITII 189

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score = 78.8 bits (195), Expect = 5e-17
 Identities = 44/206 (21%), Positives = 76/206 (36%), Gaps = 57/206 (27%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRV--TIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
           V VTGG G++GS     LL++ Y V  TI  +  R     V  L  L     +L F  AD
Sbjct: 4   VCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRD--VSFLTNLPGASEKLHFFNAD 61

Query: 131 LGDAKAVNKFFSENAFDA-------VMHFAAVAYVGESTLDPLKYYHNITSN-------- 175
           L +          ++F A       + H A+          P      ++          
Sbjct: 62  LSN---------PDSFAAAIEGCVGIFHTAS----------P--IDFAVSEPEEIVTKRT 100

Query: 176 ---TLVVLESMARHG-VDTLIYSSTCAT--YGEPEKMPITEE---------TPQAPINPY 220
               L +L++      V   IY+S+ +   +   +K  + E          + +     Y
Sbjct: 101 VDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNY 160

Query: 221 GKAKKMAEDIILDFSKNS--DMAVMI 244
             +K +AE  +L+F + +  D+  +I
Sbjct: 161 AVSKTLAEKAVLEFGEQNGIDVVTLI 186

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score = 78.4 bits (194), Expect = 7e-17
 Identities = 47/216 (21%), Positives = 76/216 (35%), Gaps = 59/216 (27%)

Query: 64  SQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRV-TIVDNLSRGNIGAVKVLQELFPEPG 122
           +QH  G     V GG G++ S     LL+  Y V T V +        V  L EL  E G
Sbjct: 3   TQHPIGKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQK--KVSHLLEL-QELG 59

Query: 123 RLQFIYADLGDAKAVNKFFSENAFDA-------VMHFAAVAYVGESTLDPLKYYHNITSN 175
            L+   ADL D         E +F+A       V H A           P   +      
Sbjct: 60  DLKIFRADLTD---------ELSFEAPIAGCDFVFHVAT----------P--VHFASEDP 98

Query: 176 -----------TLVVLESMAR-HGVDTLIYSSTCAT----YGEPEKMPITEE-------- 211
                       + V+++  R   V  +I +S+ A       +   + + E+        
Sbjct: 99  ENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFL 158

Query: 212 -TPQAPINPYGKAKKMAEDIILDFSKNS--DMAVMI 244
            + + P   Y  +K +AE     F++ +  D+  +I
Sbjct: 159 TSAKPPTWGYPASKTLAEKAAWKFAEENNIDLITVI 194

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} Length = 321

 Score = 76.1 bits (188), Expect = 5e-16
 Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 18/181 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            L+TG AG++G + A  L + +  V      SR N   +            ++ I  D+ 
Sbjct: 15  ALITGVAGFVGKYLANHLTEQNVEVF---GTSRNNEAKLP----------NVEMISLDIM 61

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN-TLVVLESMARHGVDTL 191
           D++ V K  S+   D + H AA + V +S L+      +     TL VL+++    +D  
Sbjct: 62  DSQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKK-GTFSTNVFGTLHVLDAVRDSNLDCR 120

Query: 192 IY-SSTCATYG--EPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYF 248
           I    +   YG   PE+ P++EE    P++PYG +K     +   + K   M ++  R F
Sbjct: 121 ILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKAYGMDIIHTRTF 180

Query: 249 N 249
           N
Sbjct: 181 N 181

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 73.2 bits (179), Expect = 6e-15
 Identities = 40/196 (20%), Positives = 59/196 (30%), Gaps = 26/196 (13%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTI--VDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
            L+ G  G IG+  A  L           V  ++R    A         E   + ++  D
Sbjct: 4   ALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-------HEDNPINYVQCD 56

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNI--TSNTLVVLESMARH-- 186
           + D        S      V H   V +   ST        N     N L  +     +  
Sbjct: 57  ISDPDDSQAKLS--PLTDVTHVFYVTWANRSTEQEN-CEANSKMFRNVLDAVIPNCPNLK 113

Query: 187 ----GVDTLIYSSTCATYG--EPEKMPITEETPQAPINPYGKAKKMAEDIIL-DFSKNSD 239
                     Y     +YG  E    P TE+ P+     Y       EDI+L +  K   
Sbjct: 114 HISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRL---KYMNFYYDLEDIMLEEVEKKEG 170

Query: 240 MAVMILRYFNVIGSDP 255
           +   + R  N+ G  P
Sbjct: 171 LTWSVHRPGNIFGFSP 186

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 68.2 bits (167), Expect = 2e-13
 Identities = 33/181 (18%), Positives = 65/181 (35%), Gaps = 26/181 (14%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            +L+ G  G +G   A RL    + VT    L R          +  P    +Q + AD+
Sbjct: 5   KILIAG-CGDLGLELARRLTAQGHEVTG---LRRS--------AQPMPA--GVQTLIADV 50

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
                +         + +++  A +   +        Y     N    L ++    +  +
Sbjct: 51  TRPDTLASI-VHLRPEILVYCVAASEYSDE--HYRLSYVEGLRN---TLSALEGAPLQHV 104

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVI 251
            + S+   YG+  +  + E+TP    +  GK    AE ++      +  +  ILR+  + 
Sbjct: 105 FFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEALL------AAYSSTILRFSGIY 158

Query: 252 G 252
           G
Sbjct: 159 G 159

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357

 Score = 68.7 bits (168), Expect = 2e-13
 Identities = 39/180 (21%), Positives = 62/180 (34%), Gaps = 7/180 (3%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V VTG  G+ G   +L L      V             V  L E       +Q    D+ 
Sbjct: 12  VFVTGHTGFKGGWLSLWLQTMGATVKGYSL----TAPTVPSLFETARVADGMQSEIGDIR 67

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMAR-HGVDTL 191
           D   + +   E   + V H AA   V  S  +P++ Y      T+ +LE++    GV  +
Sbjct: 68  DQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAV 127

Query: 192 IYSSTCATYGEPE-KMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNV 250
           +  ++   Y   E      E       +PY  +K  AE ++    +NS            
Sbjct: 128 VNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAE-LVTSSYRNSFFNPANYGQHGT 186

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660

 Score = 68.5 bits (168), Expect = 4e-13
 Identities = 44/228 (19%), Positives = 83/228 (36%), Gaps = 21/228 (9%)

Query: 33  FAGKFILAAALTALCIFLLKQSPTFSSPSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLK 92
                 +  +        L Q    +S    +      T VL+ G  G+IG+H   RLL+
Sbjct: 281 AGDGITMQGS-QLAQTLGLVQGSRLNSQPACTARRR--TRVLILGVNGFIGNHLTERLLR 337

Query: 93  D-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMH 151
           +  Y V  +D  S         +      P    F+  D+       ++  +   D V+ 
Sbjct: 338 EDHYEVYGLDIGS-------DAISRFLNHP-HFHFVEGDISIHSEWIEYHVKKC-DVVLP 388

Query: 152 FAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE 211
             A+A   E T +PL+ +       L ++    ++    +I+ ST   YG        E+
Sbjct: 389 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDED 447

Query: 212 TPQAPINP-------YGKAKKMAEDIILDFSKNSDMAVMILRYFNVIG 252
                + P       Y  +K++ + +I  + +   +   + R FN +G
Sbjct: 448 HSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMG 495

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score = 62.7 bits (153), Expect = 2e-11
 Identities = 38/208 (18%), Positives = 66/208 (31%), Gaps = 67/208 (32%)

Query: 71  THVLVTGGAGYIGSHAALRLLKDSYRV-TIVDNLSRGNIGAVKVLQELFPEPGRLQFIY- 128
           + VLVTG  G++ SH   +LL+  Y+V     + S+        LQ+ +      +F   
Sbjct: 12  SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKL-----ANLQKRWDAKYPGRFETA 66

Query: 129 --ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-----NITSN------ 175
              D+           + A+D V      A V           H     + ++       
Sbjct: 67  VVEDMLK---------QGAYDEV--IKGAAGV----------AHIASVVSFSNKYDEVVT 105

Query: 176 -----TLVVLESMARHG-VDTLIYSSTCAT----YGEPEKMPITEET------------- 212
                TL  L + A    V   + +S+  +        E + + E++             
Sbjct: 106 PAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLP 165

Query: 213 ---PQAPINPYGKAKKMAEDIILDFSKN 237
              PQ  +  Y  +K  AE     F   
Sbjct: 166 ESDPQKSLWVYAASKTEAELAAWKFMDE 193

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 60.8 bits (147), Expect = 3e-11
 Identities = 22/220 (10%), Positives = 56/220 (25%), Gaps = 28/220 (12%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
            + V G  G  GS       +  + V  +V +  +              +          
Sbjct: 2   KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKA------------ADRLGATVATLV 49

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
                         + DAV+   +V +        L +  ++       +  +       
Sbjct: 50  KEPLVLTEADLD--SVDAVVDALSVPWGSGRGYLHLDFATHL-------VSLLRNSDTLA 100

Query: 191 LIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSKNSDMAVMILRYFN 249
           +    + +        P+  + P++    P+                N+++  + +    
Sbjct: 101 VFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISPSE 160

Query: 250 VIGSDPEG--RLGEAPRPELRE-HGRISGACFDAARGIIA 286
              S P      G+       +    I+    + A  I+ 
Sbjct: 161 AFPSGPATSYVAGKDTLLVGEDGQSHITTG--NMALAILD 198

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 60.4 bits (147), Expect = 4e-11
 Identities = 29/178 (16%), Positives = 57/178 (32%), Gaps = 37/178 (20%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           + + G  G  G     + ++  Y VT +V + SR        L    P       +  D+
Sbjct: 6   IAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSR--------LPSEGPR--PAHVVVGDV 55

Query: 132 GDAKAVNKFFSENAF---DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
             A  V     +      DAV+          + L P         N   ++ +M  HGV
Sbjct: 56  LQAADV-----DKTVAGQDAVIV----LLGTRNDLSPTTVMSEGARN---IVAAMKAHGV 103

Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
           D ++  ++     +P K+P         +            ++    + S +  + + 
Sbjct: 104 DKVVACTSAFLLWDPTKVP-------PRLQAVTDDHIRMHKVL----RESGLKYVAVM 150

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 58.1 bits (140), Expect = 3e-10
 Identities = 27/221 (12%), Positives = 62/221 (28%), Gaps = 32/221 (14%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
            + + G  G  GS          + VT IV N  +           +      +  +  D
Sbjct: 2   KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGK-----------ITQTHKDINILQKD 50

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           + D          +  + V+   A     +     +    ++       +  +       
Sbjct: 51  IFDLTLS----DLSDQNVVVD--AYGISPDEAEKHVTSLDHL-------ISVLNGTVSPR 97

Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPY-GKAKKMAEDIILDFSKNSDMAVMILRYFN 249
           L+     A+    E      E+      PY   A+  A+ +    S  ++ +   +    
Sbjct: 98  LLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSA 157

Query: 250 VIGSDP---EGRLGE-APRPELREHGRISGACFDAARGIIA 286
           +        + ++G+         +  IS    D A  ++ 
Sbjct: 158 MFEPGERTGDYQIGKDHLLFGSDGNSFISME--DYAIAVLD 196

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 58.4 bits (141), Expect = 7e-10
 Identities = 39/240 (16%), Positives = 77/240 (32%), Gaps = 44/240 (18%)

Query: 53  QSPTFSSPSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVT-------------- 98
            + T ++          +  VL+TG  G++G +  L LL+                    
Sbjct: 56  DADTLATAVNLPGPSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDA 115

Query: 99  ---IVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK-----AVNKFFSENAFDAVM 150
              +      G+   ++  +EL  +  RL+ +  D  +        + +  +E   D ++
Sbjct: 116 RRRLEKTFDSGDPELLRHFKELAAD--RLEVVAGDKSEPDLGLDQPMWRRLAETV-DLIV 172

Query: 151 HFAA-VAYVGESTL-DPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPI 208
             AA V       L  P     N+   T  ++       +    Y ST       E    
Sbjct: 173 DSAAMVNAFPYHELFGP-----NVAG-TAELIRIALTTKLKPFTYVSTADVGAAIEPSAF 226

Query: 209 TEETPQAPINP-----------YGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEG 257
           TE+     I+P           YG +K   E ++ + +    + V + R   ++      
Sbjct: 227 TEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYA 286

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 56.5 bits (137), Expect = 1e-09
 Identities = 23/174 (13%), Positives = 56/174 (32%), Gaps = 27/174 (15%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           + + G  G +G      L    Y++      +R  +  V     +      + +   ++ 
Sbjct: 3   IFIVGSTGRVGKSLLKSLSTTDYQIYA---GAR-KVEQVPQYNNVKAVHFDVDWTPEEMA 58

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
                         DA+++ +         +D            + ++++  +  V   I
Sbjct: 59  KQLH--------GMDAIINVSGSGGKSLLKVD--------LYGAVKLMQAAEKAEVKRFI 102

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
             ST  +  +PEK           +  Y  AK  A+  +    K +++   I++
Sbjct: 103 LLSTIFS-LQPEKWI---GAGFDALKDYYIAKHFADLYLT---KETNLDYTIIQ 149

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 335

 Score = 57.2 bits (139), Expect = 1e-09
 Identities = 46/162 (28%), Positives = 70/162 (43%), Gaps = 18/162 (11%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRV------TIVDNLSRGNIGAVKVLQELFPEPGRLQFI 127
           LVTG  G  G++ A  LL+  YRV         D   R        L+EL  E   +Q+ 
Sbjct: 18  LVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWR--------LRELGIEG-DIQYE 68

Query: 128 YADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARH 186
             D+ DA +V +   +     V + AA ++VG S   P+     +       +LE++ + 
Sbjct: 69  DGDMADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPV-TTGVVDGLGVTHLLEAIRQF 127

Query: 187 GVDTLIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMA 227
             +T  Y +ST   +G  +     E TP  P +PYG AK   
Sbjct: 128 SPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYG 169

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344

 Score = 56.1 bits (136), Expect = 3e-09
 Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 30/188 (15%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TGG G  G    +R + D+     +   SR  +   + +   F +P R++F   D+ 
Sbjct: 24  ILITGGTGSFG-KCFVRKVLDTTNAKKIIVYSRDELKQSE-MAMEFNDP-RMRFFIGDVR 80

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NI--TSNTLVVLESMARHGVD 189
           D + +N        D  +H AA+ +V  +  +PL+    NI   SN   V+ +  ++ + 
Sbjct: 81  DLERLNYALEG--VDICIHAAALKHVPIAEYNPLECIKTNIMGASN---VINACLKNAIS 135

Query: 190 TLIYSST-CATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILD---FSKNSDMAVMIL 245
            +I  ST  A                 PIN YG  K  ++ + +    F  +S     ++
Sbjct: 136 QVIALSTDKAAN---------------PINLYGATKLCSDKLFVSANNFKGSSQTQFSVV 180

Query: 246 RYFNVIGS 253
           RY NV+GS
Sbjct: 181 RYGNVVGS 188

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 55.1 bits (133), Expect = 3e-09
 Identities = 38/222 (17%), Positives = 67/222 (30%), Gaps = 43/222 (19%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLV G  G +  +    L    +       + R N      L+E     G    + A+L 
Sbjct: 24  VLVVGANGKVARYLLSELKNKGHEPVA---MVR-NEEQGPELRER----GASDIVVANLE 75

Query: 133 D--AKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           +  + A        + DAV+ FAA +         +             ++   + G+  
Sbjct: 76  EDFSHAF------ASIDAVV-FAAGSGPHTGADKTILIDLWGAIK---TIQEAEKRGIKR 125

Query: 191 LIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR--- 246
            I  SS               +     +  Y  AK++A+D +    K S +   I+R   
Sbjct: 126 FIMVSSVGTV---------DPDQGPMNMRHYLVAKRLADDEL----KRSSLDYTIVRPGP 172

Query: 247 YFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGL 288
             N    +                  I+    D A+ I   +
Sbjct: 173 LSN----EESTGKVTVSPHFSEITRSITRH--DVAKVIAELV 208

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 54.4 bits (131), Expect = 5e-09
 Identities = 36/178 (20%), Positives = 58/178 (32%), Gaps = 34/178 (19%)

Query: 71  THVLVTGGAGYIGSHAALRLL-KDSYRVT-IVDNLSRGNIGAVKVLQELFPEPGRLQFIY 128
            +VL+ G  G I  H   +L  K + + T      ++        + + +P     Q I 
Sbjct: 24  KNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAK--------IHKPYPT--NSQIIM 73

Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            D+ +  A+     + A          A +    LD              V+ +M    V
Sbjct: 74  GDVLNHAAL-----KQAMQGQ--DIVYANLTGEDLDIQ---------ANSVIAAMKACDV 117

Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
             LI+  +   Y E        E   A I    K  + A D I    + S +   ILR
Sbjct: 118 KRLIFVLSLGIYDEV--PGKFVEWNNAVIGEPLKPFRRAADAI----EASGLEYTILR 169

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 53.9 bits (129), Expect = 8e-09
 Identities = 27/204 (13%), Positives = 64/204 (31%), Gaps = 30/204 (14%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
           ++ + G AG I       LL  +   +T+     R        +     +  R+  I   
Sbjct: 7   YITILGAAGQIAQXLTATLLTYTDMHITL---YGR---QLKTRIPPEIIDHERVTVIEGS 60

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
             +   + +  +    + V  F      G                   ++++++R  +  
Sbjct: 61  FQNPGXLEQAVT--NAEVV--FVGAMESGSDMAS--------------IVKALSRXNIRR 102

Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNV 250
           +I  S     GE   + + + T       Y + ++ A +++    + S++   ILR   +
Sbjct: 103 VIGVSMAGLSGE-FPVALEKWTFDNLPISYVQGERQARNVL----RESNLNYTILRLTWL 157

Query: 251 IGSDPEGRLGEAPRPELREHGRIS 274
                       P        ++S
Sbjct: 158 YNDPEXTDYELIPEGAQFNDAQVS 181

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* Length = 345

 Score = 53.4 bits (129), Expect = 2e-08
 Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 18/162 (11%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRV------TIVDNLSRGNIGAVKVLQELFPEPGRLQFI 127
           L+TG  G  G++ A  LL+  Y V      +      R        L+EL  E   ++ I
Sbjct: 7   LITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWR--------LKELGIEN-DVKII 57

Query: 128 YADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARH 186
           + DL +   + +   +   D V + AA ++VG S   P+     + +   L +LE++   
Sbjct: 58  HMDLLEFSNIIRTIEKVQPDEVYNLAAQSFVGVSFEQPI-LTAEVDAIGVLRILEALRTV 116

Query: 187 GVDTLIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMA 227
             DT  Y +ST   +G+ +++P TE+TP  P +PY  AK   
Sbjct: 117 KPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFG 158

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 51.8 bits (124), Expect = 5e-08
 Identities = 41/232 (17%), Positives = 70/232 (30%), Gaps = 38/232 (16%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTG +G  G     +L + S +            G V+  Q      G       D+ 
Sbjct: 7   VLVTGASGRTGQIVYKKLKEGSDKFVAK--------GLVRSAQGKEKIGGEADVFIGDIT 58

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN-------------TLVV 179
           DA ++N  F     DA++   +     +   DP K                         
Sbjct: 59  DADSINPAF--QGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQ 116

Query: 180 LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSD 239
           +++    GV  ++   +    G     P+ +             K+ AE  +     +S 
Sbjct: 117 IDAAKVAGVKHIVVVGSMG--GTNPDHPLNKLGNG----NILVWKRKAEQYL----ADSG 166

Query: 240 MAVMILR---YFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGL 288
               I+R     +  G   E  +G+       +   +  A  D A   I  L
Sbjct: 167 TPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRA--DVAEVCIQAL 216

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 Length = 372

 Score = 49.2 bits (118), Expect = 6e-07
 Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 23/168 (13%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRV------TIVDNLSRGNIGAVKVLQELFPEP----GR 123
           L+TG  G  GS+ A  LL+  Y V          N  R        +  ++ +P     +
Sbjct: 5   LITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTER--------VDHIYQDPHTCNPK 56

Query: 124 LQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLES 182
               Y DL D   + +   E   D V +  A+++V  S   P +Y  ++ +  TL +LE+
Sbjct: 57  FHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESP-EYTADVDAMGTLRLLEA 115

Query: 183 MARHGVD--TLIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMA 227
           +   G++  T  Y +ST   YG  +++P  E TP  P +PY  AK  A
Sbjct: 116 IRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYA 163

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 375

 Score = 48.4 bits (116), Expect = 1e-06
 Identities = 46/169 (27%), Positives = 76/169 (44%), Gaps = 24/169 (14%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRV------TIVDNLSRGNIGAVKVLQELFPEP-----G 122
           L+TG  G  GS+ A  LL+  Y V      +   N  R        ++ L+  P     G
Sbjct: 28  LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGR--------IEHLYKNPQAHIEG 79

Query: 123 RLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLE 181
            ++  Y DL D+  + K  +E     + +  A ++V  S     +Y  ++    TL +L+
Sbjct: 80  NMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGVGTLRLLD 138

Query: 182 SMARHGV--DTLIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMA 227
           ++   G+      Y +ST   YG+ +++P  E TP  P +PYG AK  A
Sbjct: 139 AVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYA 187

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} Length = 273

 Score = 46.8 bits (112), Expect = 2e-06
 Identities = 41/164 (25%), Positives = 65/164 (39%), Gaps = 28/164 (17%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            L+TG +G +G     RLL + + V  V N S    G      +L            DL 
Sbjct: 3   TLITGASGQLG-IELSRLLSERHEVIKVYNSSEIQGG-----YKL------------DLT 44

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGVDTL 191
           D   +  F  +   D +++ AA+  V +  ++  K Y  N  +    ++ +        +
Sbjct: 45  DFPRLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEA-VRHIVRAGKVIDS-YI 102

Query: 192 IYSSTCATY---GEPEKMPITEETPQAPINPYGKAKKMAEDIIL 232
           ++ ST   Y   GE  K    EE    PIN YG +K + E   L
Sbjct: 103 VHIST--DYVFDGE--KGNYKEEDIPNPINYYGLSKLLGETFAL 142

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A Length = 315

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 43/183 (23%), Positives = 68/183 (37%), Gaps = 41/183 (22%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTG  G +G  A  +  + +    +     R      +V                +L 
Sbjct: 5   VLVTGATGLLG-RAVHKEFQQNNWHAVGCGFRRARPKFEQV----------------NLL 47

Query: 133 DAKAVNKFFSENAFDAVMHFAA-----VAYVGESTLDPLKYYH-NITSNTLVVLESMARH 186
           D+ AV+    +     ++H AA     V    E+   P      N+ + +  + +  A  
Sbjct: 48  DSNAVHHIIHDFQPHVIVHCAAERRPDVV---EN--QPDAASQLNVDA-SGNLAKEAAAV 101

Query: 187 GVDTLIYSSTCATY---GEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVM 243
           G   LIY S+   Y   G     P  EE   AP+N YGK K   E  +L+ +  +     
Sbjct: 102 GA-FLIYISS--DYVFDG--TNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGA----A 152

Query: 244 ILR 246
           +LR
Sbjct: 153 VLR 155

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 20/145 (13%), Positives = 39/145 (26%), Gaps = 30/145 (20%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LV GG+G +G+         S+    +D                   P           
Sbjct: 25  ILVLGGSGALGAEVVKFFKSKSWNTISID---------------FRENPNADHSFTIKDS 69

Query: 133 DAKAVNKFFSENA-----FDAVMHFAAVAYVGESTLD-PLKYYH-----NITSNTLV--- 178
             + +     +        D  +  A     G ++ D  LK        N+ S       
Sbjct: 70  GEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHI 129

Query: 179 VLESMARHGVDTLIYSSTCATYGEP 203
             + + + G+  L   ++ A     
Sbjct: 130 GAKLLNQGGLFVLT-GASAALNRTS 153

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* Length = 321

 Score = 43.7 bits (104), Expect = 3e-05
 Identities = 47/173 (27%), Positives = 73/173 (42%), Gaps = 47/173 (27%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V + G  G +GS A  R L+    V +V          ++   EL            +L 
Sbjct: 6   VFIAGHRGMVGS-AIRRQLEQRGDVELV----------LRTRDEL------------NLL 42

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVG----ESTLDPLKY-YHN--ITSNTLVVLESMAR 185
           D++AV+ FF+    D V  + A A VG     +T  P  + Y N  I SN   ++ +  +
Sbjct: 43  DSRAVHDFFASERIDQV--YLAAAKVGGIVANNTY-PADFIYQNMMIESN---IIHAAHQ 96

Query: 186 HGVDTLIY-SSTCATYGEPEKMPITEET----PQAPIN-PYGKAK----KMAE 228
           + V+ L++  S+C  Y +  K P+ E         P N PY  AK    K+ E
Sbjct: 97  NDVNKLLFLGSSCI-YPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCE 148

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 43.0 bits (101), Expect = 5e-05
 Identities = 37/219 (16%), Positives = 64/219 (29%), Gaps = 40/219 (18%)

Query: 78  GAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAV 137
           G GY     +  L    +R+      SR N   ++ ++    EP         L     +
Sbjct: 12  GHGYTARVLSRALAPQGWRIIG---TSR-NPDQMEAIRASGAEPLLWPGEEPSLDGVTHL 67

Query: 138 NKFFSENAFDAVMHFAAVAYVGESTLDP-LKYYHNITSNTLVVLESMARHGVDTLIYSST 196
                      ++  A  +       DP L    +  +                + Y ST
Sbjct: 68  -----------LISTAPDSGG-----DPVLAALGDQIAARA--------AQFRWVGYLST 103

Query: 197 CATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPE 256
            A YG+ +   + E TP  P    G+ + MAE          ++ + + R   + G  P 
Sbjct: 104 TAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAV---PNLPLHVFRLAGIYG--PG 158

Query: 257 GRLGEAPRPELREHGRISGACF------DAARGIIAGLK 289
                             G  F      D A+ + A + 
Sbjct: 159 RGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMA 197

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 Length = 292

 Score = 42.5 bits (101), Expect = 6e-05
 Identities = 45/179 (25%), Positives = 69/179 (38%), Gaps = 39/179 (21%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TG  G +G     +L   +  V   D            +Q+L            D+ 
Sbjct: 15  ILITGANGQLGREIQKQLKGKNVEVIPTD------------VQDL------------DIT 50

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYV--GESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           +  AVNKFF+E   + V++ AA   V   E   D L Y  N       +  +    G   
Sbjct: 51  NVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYD-LAYKINAIG-PKNLAAAAYSVGA-E 107

Query: 191 LIYSSTCATY---GEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
           ++  ST   Y   GE ++ PITE     P + YGK K   E+ +   +        I+R
Sbjct: 108 IVQIST--DYVFDGEAKE-PITEFDEVNPQSAYGKTKLEGENFVKALNPKY----YIVR 159

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* Length = 381

 Score = 42.7 bits (101), Expect = 7e-05
 Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 27/171 (15%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRV------TIVDNLSRGNIGAVKVLQELFPEP-----G 122
           L+TG  G  GS+    LL   Y V      +   N  R        +  ++ +P      
Sbjct: 32  LITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQR--------INHIYIDPHNVNKA 83

Query: 123 RLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLE 181
            ++  YADL DA ++ ++      D V + AA ++V  S   P  Y  ++ +   L +LE
Sbjct: 84  LMKLHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPD-YTADVVATGALRLLE 142

Query: 182 SMARHGVDTL----IY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMA 227
           ++  H +D+      Y + +   +G     P +E TP  P +PY  +K  A
Sbjct: 143 AVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAA 192

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 42.5 bits (101), Expect = 7e-05
 Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            +VTGGA  IG   + +L  D + + + D L +    A + ++ +     +  F+  D+ 
Sbjct: 5   AMVTGGAQGIGRGISEKLAADGFDIAVAD-LPQQEEQAAETIKLIEAADQKAVFVGLDVT 63

Query: 133 DAKAVNKFFSE 143
           D    +    E
Sbjct: 64  DKANFDSAIDE 74

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 42.2 bits (100), Expect = 8e-05
 Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYAD 130
           H L+T G   +G     +LL   Y VT+       +  A++ ++E + +   RLQF+ AD
Sbjct: 9   HALITAGTKGLGKQVTEKLLAKGYSVTVTY---HSDTTAMETMKETYKDVEERLQFVQAD 65

Query: 131 LGDAKAVNKFFSE 143
           +   + ++K   E
Sbjct: 66  VTKKEDLHKIVEE 78

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} Length = 287

 Score = 42.1 bits (100), Expect = 1e-04
 Identities = 40/179 (22%), Positives = 59/179 (32%), Gaps = 39/179 (21%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V++TG  G +G      L  + Y +   D             + L            D+ 
Sbjct: 8   VIITGANGQLGKQLQEELNPEEYDIYPFD------------KKLL------------DIT 43

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYV--GESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           +   V +   E     ++H AA   V   E   D L Y  N       V  +    G   
Sbjct: 44  NISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERD-LAYVINAIG-ARNVAVASQLVGA-K 100

Query: 191 LIYSSTCATY---GEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
           L+Y ST   Y   G+  +    E    APIN YG +K   E  + +          I+R
Sbjct: 101 LVYIST--DYVFQGDRPE-GYDEFHNPAPINIYGASKYAGEQFVKELHNKY----FIVR 152

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 41.9 bits (98), Expect = 1e-04
 Identities = 30/176 (17%), Positives = 54/176 (30%), Gaps = 31/176 (17%)

Query: 56  TFSSPSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQ 115
               PSP  +       VL+ G  G+IG   A   L       I+      +    K+ +
Sbjct: 3   VSPVPSPKGR-------VLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFK 55

Query: 116 ELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN 175
            L  E      +Y  + + +A+ K   E+  D V+          ST+        I   
Sbjct: 56  AL--EDKGAIIVYGLINEQEAMEKILKEHEIDIVV----------STVGGESILDQIA-- 101

Query: 176 TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDII 231
              ++++M   G       S            +    P  P     + K+    ++
Sbjct: 102 ---LVKAMKAVGTIKRFLPSEF-------GHDVNRADPVEPGLNMYREKRRVRQLV 147

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 41.0 bits (97), Expect = 2e-04
 Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
             VTGG G IG+    RL KD +RV      +      VK L++             ++G
Sbjct: 16  AYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSP--RRVKWLEDQKALGFDFYASEGNVG 73

Query: 133 DAKAVNKFFSE 143
           D  +  + F +
Sbjct: 74  DWDSTKQAFDK 84

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 41.0 bits (96), Expect = 2e-04
 Identities = 25/208 (12%), Positives = 47/208 (22%), Gaps = 36/208 (17%)

Query: 61  SPFSQHEEGVT----HVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVL 114
              S+  E        V + G +G  G      +L+     +VT+   + R      + L
Sbjct: 5   EALSKLREDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTL---IGR------RKL 55

Query: 115 QELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS 174
                    +     D          F     D                  ++   +   
Sbjct: 56  TFDEEAYKNVNQEVVDFEKLDDYASAF--QGHDVGFCCLGTTRGKAGAEGFVRVDRDYVL 113

Query: 175 NTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDF 234
                 E     G       S+                  +    Y + K   E  + + 
Sbjct: 114 K---SAELAKAGGCKHFNLLSSKGA------------DKSSN-FLYLQVKGEVEAKVEEL 157

Query: 235 SKNSDMAVMILRYFNVIGSDPEGRLGEA 262
             +      + R   ++    E R GE 
Sbjct: 158 KFDR---YSVFRPGVLLCDRQESRPGEW 182

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 41.0 bits (97), Expect = 2e-04
 Identities = 19/71 (26%), Positives = 26/71 (36%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            +VTGG   IG   A  L    + + I         G   V+ EL     R+ F+ ADL 
Sbjct: 32  AIVTGGRRGIGLGIARALAASGFDIAITGIGDAE--GVAPVIAELSGLGARVIFLRADLA 89

Query: 133 DAKAVNKFFSE 143
           D  +       
Sbjct: 90  DLSSHQATVDA 100

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A Length = 450

 Score = 41.4 bits (96), Expect = 2e-04
 Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 10/80 (12%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            VL+  G+G++       L     +VT+           ++  ++L         I  D+
Sbjct: 5   SVLM-LGSGFVTRPTLDVLTDSGIKVTVACR-------TLESAKKLSAGVQHSTPISLDV 56

Query: 132 GDAKAVNKFFSENAFDAVMH 151
            D  A++   ++   D V+ 
Sbjct: 57  NDDAALDAEVAK--HDLVIS 74

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 19/72 (26%), Positives = 25/72 (34%), Gaps = 3/72 (4%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
             LVTG    IG   A RL K+  RV +     RG  G    L+EL            D+
Sbjct: 24  VALVTGATSGIGLEIARRLGKEGLRVFVCA---RGEEGLRTTLKELREAGVEADGRTCDV 80

Query: 132 GDAKAVNKFFSE 143
                +    + 
Sbjct: 81  RSVPEIEALVAA 92

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 40.6 bits (96), Expect = 2e-04
 Identities = 14/71 (19%), Positives = 33/71 (46%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +++ GG   +G+  A     +S  + +  + ++ +  A K+  EL  +  ++    +DL 
Sbjct: 14  IVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLS 73

Query: 133 DAKAVNKFFSE 143
           + + V K F  
Sbjct: 74  NEEEVAKLFDF 84

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 40.7 bits (96), Expect = 3e-04
 Identities = 12/72 (16%), Positives = 18/72 (25%), Gaps = 3/72 (4%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
              VTG +  IG   A  L      V       R        +  L      +     D+
Sbjct: 26  TAFVTGVSSGIGLAVARTLAARGIAVYGCA---RDAKNVSAAVDGLRAAGHDVDGSSCDV 82

Query: 132 GDAKAVNKFFSE 143
                V+   + 
Sbjct: 83  TSTDEVHAAVAA 94

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 40.6 bits (96), Expect = 3e-04
 Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 5/78 (6%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTGG   IG   A  L+     V IV        GAV+ L+ L    G +++   D+ 
Sbjct: 14  YLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDIT 73

Query: 133 DAKAVNKFFSENAFDAVM 150
           +           A DAV 
Sbjct: 74  NEDET-----ARAVDAVT 86

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 40.3 bits (95), Expect = 4e-04
 Identities = 11/73 (15%), Positives = 21/73 (28%), Gaps = 3/73 (4%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYAD 130
             ++TG    IG   A  L K    + +    +        V  E+       +    AD
Sbjct: 27  TAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPD--EIRTVTDEVAGLSSGTVLHHPAD 84

Query: 131 LGDAKAVNKFFSE 143
           +     +    + 
Sbjct: 85  MTKPSEIADMMAM 97

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 40.3 bits (94), Expect = 4e-04
 Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 7/79 (8%)

Query: 71  THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
           + +L+ GG GYIG+H     LK  +   +    +R N     +L E   +      +  +
Sbjct: 12  SKILIFGGTGYIGNHMVKGSLKLGHPTYV---FTRPNSSKTTLLDEF--QSLGAIIVKGE 66

Query: 131 LGDAKAVNKFFSENAFDAV 149
           L + + + +   +   D V
Sbjct: 67  LDEHEKLVELMKK--VDVV 83

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 39.9 bits (94), Expect = 5e-04
 Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
             VTGG G +G+  + RL      V +  + S  N      L          +    D+ 
Sbjct: 28  AFVTGGMGGLGAAISRRLHDAGMAVAV--SHSERNDHVSTWLMHERDAGRDFKAYAVDVA 85

Query: 133 DAKAVNKFFSE 143
           D ++  +   +
Sbjct: 86  DFESCERCAEK 96

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 39.8 bits (94), Expect = 5e-04
 Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VL+TG +  IG   A    +   +V +    +       + +  +  + G   F  ADL 
Sbjct: 10  VLITGSSQGIGLATARLFARAGAKVGLHGRKAPA--NIDETIASMRADGGDAAFFAADLA 67

Query: 133 DAKAVNKFFSE 143
            ++A  +   E
Sbjct: 68  TSEACQQLVDE 78

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 39.8 bits (94), Expect = 5e-04
 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG +  IG   AL+L ++ Y V +    S+    A  V++E+  +      I A++ 
Sbjct: 7   ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKE--KAEAVVEEIKAKGVDSFAIQANVA 64

Query: 133 DAKAVNKFFSE 143
           DA  V     E
Sbjct: 65  DADEVKAMIKE 75

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.6 bits (94), Expect = 5e-04
 Identities = 33/265 (12%), Positives = 73/265 (27%), Gaps = 86/265 (32%)

Query: 4   FGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCI--------FLLKQSP 55
           F    ++Q +        +       + N+  KF L + +             ++ ++  
Sbjct: 68  FWTLLSKQEEMVQKFVEEVL------RINY--KF-LMSPIKTEQRQPSMMTRMYIEQRDR 118

Query: 56  TFSSPSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQ 115
            ++    F+++     +V                      R+     L        + L 
Sbjct: 119 LYNDNQVFAKY-----NV---------------------SRLQPYLKLR-------QALL 145

Query: 116 ELFPEPGRLQFIYADLGDAK------AVNKFFSENAFDAVMHFAAVAYVG--ESTLDPL- 166
           EL P       I   LG  K          +  +   D  + +  +      E+ L+ L 
Sbjct: 146 ELRPAKN--VLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQ 203

Query: 167 KYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKM 226
           K  + I  N     +  +                     + +   + QA +    K+K  
Sbjct: 204 KLLYQIDPNWTSRSDHSSN--------------------IKLRIHSIQAELRRLLKSKPY 243

Query: 227 AED-IILDFSKNSDMAVMILRYFNV 250
               ++L   +N+         FN+
Sbjct: 244 ENCLLVLLNVQNAK----AWNAFNL 264

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score = 39.9 bits (94), Expect = 5e-04
 Identities = 21/79 (26%), Positives = 28/79 (35%), Gaps = 9/79 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
            LVTGG   +G   A  L  + Y V I     R          E+    G  ++ +  D+
Sbjct: 36  ALVTGGGTGVGRGIAQALSAEGYSVVITG---RRPDVLDAAAGEIGGRTGNIVRAVVCDV 92

Query: 132 GDAKAVNKFFSENAFDAVM 150
           GD   V        F AV 
Sbjct: 93  GDPDQV-----AALFAAVR 106

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 39.9 bits (94), Expect = 6e-04
 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG A  IG   A  LL    +V +VD      +     L E F EP +  FI  D+ 
Sbjct: 10  ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF-EPQKTLFIQCDVA 68

Query: 133 DAKAVNKFFSE 143
           D + +   F +
Sbjct: 69  DQQQLRDTFRK 79

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 39.4 bits (93), Expect = 6e-04
 Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG +  IG   A+ L K    V +    +     A +V+ E+         + AD+ 
Sbjct: 7   ALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQ--KANEVVDEIKKLGSDAIAVRADVA 64

Query: 133 DAKAVNKFFSE 143
           +A+ V     +
Sbjct: 65  NAEDVTNMVKQ 75

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 39.5 bits (93), Expect = 7e-04
 Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG +  IG   AL L     +V +    S G   A +V+  +    G    + AD+ 
Sbjct: 31  ALVTGASRGIGRAIALELAAAGAKVAVNYASSAG--AADEVVAAIAAAGGEAFAVKADVS 88

Query: 133 DAKAVNKFFSE 143
               V   F+ 
Sbjct: 89  QESEVEALFAA 99

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 39.4 bits (93), Expect = 7e-04
 Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V+VTG +  IG   AL L K   +V +  N +R    A +V +++    G+      D+ 
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLV--NYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 133 DAKAVNKFFSE 143
               V      
Sbjct: 62  KEADVEAMMKT 72

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score = 39.5 bits (93), Expect = 8e-04
 Identities = 12/71 (16%), Positives = 29/71 (40%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V++TG +  IG   A+   ++   VTI    S       +++ +      ++  + AD+ 
Sbjct: 9   VIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVT 68

Query: 133 DAKAVNKFFSE 143
                ++  + 
Sbjct: 69  TEDGQDQIINS 79

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 39.0 bits (92), Expect = 8e-04
 Identities = 9/71 (12%), Positives = 22/71 (30%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            +VTG +  +G   A +L      + +  + +          +E       +     D+ 
Sbjct: 8   AIVTGSSRGLGKAIAWKLGNMGANIVLNGSPAST--SLDATAEEFKAAGINVVVAKGDVK 65

Query: 133 DAKAVNKFFSE 143
           + + V      
Sbjct: 66  NPEDVENMVKT 76

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 39.1 bits (92), Expect = 8e-04
 Identities = 14/78 (17%), Positives = 26/78 (33%), Gaps = 13/78 (16%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVD-NLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            +VTG +  +G+     L ++   V  +D     G     +   EL      ++F  AD+
Sbjct: 10  FIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGE----EPAAEL---GAAVRFRNADV 62

Query: 132 GDAKAVNKFFSENAFDAV 149
            +           A    
Sbjct: 63  TNEADA-----TAALAFA 75

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	296
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.98
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.98
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.98
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.98
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.98
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.97
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.97
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.97
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.97
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.97
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.97
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.97
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.97
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.97
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.97
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.97
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.97
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.97
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.97
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.97
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.97
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.97
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.97
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.97
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.97
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.97
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.97
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.97
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.97
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.97
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.97
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.97
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.96
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.96
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.96
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.96
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.96
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.96
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.96
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.96
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.96
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.96
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.96
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.96
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.96
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.96
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.96
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.96
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.96
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.96
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.96
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.96
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.96
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.96
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.96
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.96
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.96
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.96
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.96
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.96
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.96
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.96
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.96
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.96
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.96
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.96
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.96
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.96
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.96
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.96
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.96
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.96
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.96
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.96
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.96
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.96
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.96
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.96
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.96
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.96
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.96
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.96
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.96
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.96
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.96
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.96
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.96
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.96
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.96
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.96
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.96
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.96
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.96
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.96
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.96
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.96
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.96
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.96
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.96
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.96
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.96
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.96
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.96
1spx_A	278	Short-chain reductase family member (5L265); paral	99.96
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.96
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.96
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.96
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.96
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.96
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.96
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.96
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.96
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.96
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.95
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.95
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.95
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.95
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.95
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.95
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.95
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.95
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.95
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.95
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.95
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.95
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.95
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.95
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.95
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.95
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.95
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.95
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.95
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.95
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.95
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.95
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.95
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.95
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.95
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.95
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.95
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.95
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.95
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.95
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.95
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.95
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.95
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.95
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.95
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.95
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.95
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.95
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.95
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.95
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.95
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.95
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.95
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.95
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.95
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.95
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.95
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.95
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.95
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.95
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.95
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.95
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.95
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.95
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.95
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.95
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.95
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.95
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.95
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.95
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.95
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.95
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.95
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.95
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.95
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.95
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.95
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.95
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.95
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.95
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.95
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.95
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.95
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.95
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.95
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.95
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.95
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.95
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.95
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.95
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.95
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.95
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.95
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.95
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.95
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.95
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.95
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.95
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.95
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.95
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.95
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.95
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.95
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.95
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.94
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.94
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.94
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.94
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.94
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.94
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.94
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.94
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.94
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.94
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.94
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.94
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.94
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.94
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.94
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.94
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.94
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.94
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.94
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.94
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.94
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.94
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.94
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.94
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.94
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.94
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.94
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.94
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.94
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.94
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.94
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.94
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.94
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.94
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.94
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.94
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.94
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.94
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.94
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.94
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.94
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.94
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.93
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.93
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.93
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.93
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.93
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.93
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.93
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.93
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.92
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.92
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.92
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.92
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.92
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.92
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.91
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.91
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.91
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.9
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.9
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.9
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.9
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.9
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.89
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.89
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.89
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.89
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.89
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.89
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.88
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.88
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.88
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.88
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.87
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.87
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.86
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.86
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.86
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.85
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.84
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.83
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.83
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.83
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.83
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.82
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.82
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.81
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.81
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.72
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.71
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.53
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.25
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	99.18
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.17
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	99.03
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	99.01
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.95
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.9
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.85
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.85
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.81
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.71
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.68
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.6
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.49
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.47
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.45
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.45
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.42
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.38
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.34
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.33
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.24
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.2
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.19
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.18
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.18
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.16
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.12
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.1
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.09
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.07
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.04
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	98.03
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	98.03
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.03
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.99
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.99
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.97
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.97
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.97
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	97.95
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.94
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.93
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.91
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.91
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.9
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.88
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.87
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.85
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.83
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.82
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.76
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.76
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.75
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.74
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.73
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	97.73
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.72
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.72
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.72
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.69
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.64
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.64
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.63
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.61
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	97.59
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.59
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.58
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.57
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.56
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.55
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.53
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.53
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.52
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.52
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.52
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.49
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.48
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.48
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.48
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.46
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.46
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	97.42
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	97.42
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.42
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.41
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.41
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.4
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.39
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.39
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.38
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.37
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.36
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.33
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.33
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	97.32
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.32
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.29
1lnq_A	336	MTHK channels, potassium channel related protein;	97.28
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.27
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.24
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.23
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.23
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	97.21
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.2
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	97.17
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	97.15
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.13
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.12
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.11
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.09
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.09
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.08
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	97.06
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	97.0
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.99
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.99
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.98
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.98
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	96.95
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	96.94
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	96.94
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.93
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.92
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.92
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.91
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.91
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.89
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.89
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.88
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	96.88
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	96.88
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.87
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.86
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.86
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.84
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	96.82
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.82
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	96.81
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	96.77
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.72
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.71
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.68
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.68
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.68
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	96.68
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.66
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	96.65
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	96.64
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	96.62
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.61
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.6
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.6
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.57
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.57
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.56
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	96.56
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.51
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.51
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.51
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.49
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.48
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.47
1kjq_A	391	GART 2, phosphoribosylglycinamide formyltransferas	96.41
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	96.41
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.4
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.4
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.39
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.39
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.39
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.36
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	96.34
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	96.34
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	96.32
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.31
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	96.29
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	96.26
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	96.24
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.22
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	96.22
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	96.2
2dwc_A	433	PH0318, 433AA long hypothetical phosphoribosylglyc	96.15
4ffl_A	363	PYLC; amino acid, biosynthesis of pyrrolysine, iso	96.15

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-34  Score=260.57  Aligned_cols=216  Identities=37%  Similarity=0.613  Sum_probs=183.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +|+||||||+||||++++++|+++|++|++++|+.....+..+.+....  +.++.++.+|++|.++++++++..++|+|
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   82 (341)
T 3enk_A            5 KGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKIT--GKTPAFHETDVSDERALARIFDAHPITAA   82 (341)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHH--SCCCEEECCCTTCHHHHHHHHHHSCCCEE
T ss_pred             CcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhc--CCCceEEEeecCCHHHHHHHHhccCCcEE
Confidence            3799999999999999999999999999999998776665555544432  24688999999999999999977789999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~  229 (296)
                      |||||........+.+.+.++.|+.++.+++++|++.+.++||++||.++|+.....+++|+.+..+.++|+.||.++|.
T Consensus        83 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~  162 (341)
T 3enk_A           83 IHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQ  162 (341)
T ss_dssp             EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHH
T ss_pred             EECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHH
Confidence            99999876555666778899999999999999999999899999999999998888889999999999999999999999


Q ss_pred             HHHHhhhcCC-CcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCCcceE
Q 022471          230 IILDFSKNSD-MAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKV  290 (296)
Q Consensus       230 ~~~~~~~~~g-i~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  290 (296)
                      +++.++.+.+ ++++++||++||||++.+.+|.......   ..+++.+.+.+.+..+.+.+
T Consensus       163 ~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~  221 (341)
T 3enk_A          163 ILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIP---NNLMPYVAQVAVGKLEKLRV  221 (341)
T ss_dssp             HHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSC---SSHHHHHHHHHHTSSSCEEE
T ss_pred             HHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCc---cchHHHHHHHHhcCCCceEE
Confidence            9999998865 9999999999999998777666544322   27888888877765554443

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=3.6e-33  Score=249.94  Aligned_cols=207  Identities=40%  Similarity=0.637  Sum_probs=172.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      ||+||||||+||||++++++|+++|++|++++|+.....   +.   +   ..++.++.+|++|.+++++++++.++|+|
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~---~---~~~~~~~~~D~~~~~~~~~~~~~~~~d~v   71 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DA---I---TEGAKFYNGDLRDKAFLRDVFTQENIEAV   71 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GG---S---CTTSEEEECCTTCHHHHHHHHHHSCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hh---c---CCCcEEEECCCCCHHHHHHHHhhcCCCEE
Confidence            589999999999999999999999999999998654322   11   1   13688999999999999999965589999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~  229 (296)
                      ||+||........+++...+++|+.++.++++++++.+.++||++||.++|+.....+++|+.+..|.++|+.||.++|.
T Consensus        72 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  151 (330)
T 2c20_A           72 MHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEK  151 (330)
T ss_dssp             EECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHH
T ss_pred             EECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHH
Confidence            99999765433445677899999999999999999998899999999999988777789999988899999999999999


Q ss_pred             HHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCCcce
Q 022471          230 IILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLK  289 (296)
Q Consensus       230 ~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  289 (296)
                      +++.++.+.|++++++||++||||++.+.+|....+.    ..+++.+.+.+.++.+.+.
T Consensus       152 ~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~~~~~  207 (330)
T 2c20_A          152 MLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPE----THLIPLVLQVALGQREKIM  207 (330)
T ss_dssp             HHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSC----CSHHHHHHHHHTTSSSCEE
T ss_pred             HHHHHHHHhCCcEEEEecCcccCCCCcCccccccccc----cchHHHHHHHHhhcCCCeE
Confidence            9999998889999999999999998766665543221    2678888887765544343

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=2.2e-33  Score=253.57  Aligned_cols=206  Identities=26%  Similarity=0.365  Sum_probs=175.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCC--CCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE--PGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      +|+||||||||+||++++++|+++|++|++++|+........+.+......  ..++.++.+|++|.+++.+++  .++|
T Consensus        25 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d  102 (351)
T 3ruf_A           25 PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVM--KGVD  102 (351)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHT--TTCS
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh--cCCC
Confidence            489999999999999999999999999999999776554444444332110  047899999999999999999  4899


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHH
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~  227 (296)
                      +|||+||.........++...+++|+.++.++++++++.++++|||+||.++|+.....+++|+.+..|.++|+.+|.++
T Consensus       103 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~  182 (351)
T 3ruf_A          103 HVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVN  182 (351)
T ss_dssp             EEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHH
T ss_pred             EEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHHH
Confidence            99999997665556667788999999999999999999999999999999999988888999999999999999999999


Q ss_pred             HHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          228 EDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       228 e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      |.+++.++.+.|++++++||++||||+....      ..   ...+++.+++.+..+++
T Consensus       183 E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~------~~---~~~~~~~~~~~~~~~~~  232 (351)
T 3ruf_A          183 EIYAQVYARTYGFKTIGLRYFNVFGRRQDPN------GA---YAAVIPKWTAAMLKGDD  232 (351)
T ss_dssp             HHHHHHHHHHHCCCCEEEEECSEESTTCCCC------ST---TCCHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHhCCCEEEEeeCceeCcCCCCC------cc---hhhHHHHHHHHHHcCCC
Confidence            9999999988899999999999999985432      00   12678888888887776

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=7.2e-33  Score=249.70  Aligned_cols=202  Identities=25%  Similarity=0.369  Sum_probs=164.4

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (296)
                      .+|+|||||||||||++++++|+++|  ++|++++|......  .+.++.... ..++.++.+|++|.+++.++++..++
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~   99 (346)
T 4egb_A           23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSIQD-HPNYYFVKGEIQNGELLEHVIKERDV   99 (346)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTTTT-CTTEEEEECCTTCHHHHHHHHHHHTC
T ss_pred             CCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhhcc-CCCeEEEEcCCCCHHHHHHHHhhcCC
Confidence            45899999999999999999999999  67888877542221  122222222 25799999999999999999976569


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCC-CCCCCCCCCCCCCCChHHHHHH
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEP-EKMPITEETPQAPINPYGKAKK  225 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~-~~~~~~e~~~~~~~~~Y~~sK~  225 (296)
                      |+|||+||........+++...+++|+.++.++++++++.+.++|||+||.++|+.. ...+++|+.+..|.++|+.+|.
T Consensus       100 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~  179 (346)
T 4egb_A          100 QVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKA  179 (346)
T ss_dssp             CEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHH
T ss_pred             CEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHH
Confidence            999999998766666677888999999999999999999999999999999999876 4568999999999999999999


Q ss_pred             HHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          226 MAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       226 ~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      ++|.+++.++.++|++++++||++||||+....             .+++.+++.+..+++
T Consensus       180 ~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-------------~~~~~~~~~~~~~~~  227 (346)
T 4egb_A          180 SADMIALAYYKTYQLPVIVTRCSNNYGPYQYPE-------------KLIPLMVTNALEGKK  227 (346)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-------------SHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHhCCCEEEEeecceeCcCCCcc-------------chHHHHHHHHHcCCC
Confidence            999999999988899999999999999985321             678888888888776

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=3.4e-32  Score=244.51  Aligned_cols=210  Identities=36%  Similarity=0.635  Sum_probs=168.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+||||||+||||++++++|+++|++|++++|..+......+.++...  +.++.++.+|++|.++++++++..++|+||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vi   78 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALMTEILHDHAIDTVI   78 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH--TSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc--CCcceEEEccCCCHHHHHHHhhccCCCEEE
Confidence            479999999999999999999999999999875544333333333221  245788999999999999998755799999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC-CChHHHHHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP-INPYGKAKKMAED  229 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~-~~~Y~~sK~~~e~  229 (296)
                      ||||........+++.+.+++|+.++.+++++|++.+.++||++||.++|+.....+++|+.+..+ .++|+.||.++|.
T Consensus        79 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~  158 (338)
T 1udb_A           79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQ  158 (338)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHH
T ss_pred             ECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHH
Confidence            999975443344566788999999999999999998889999999999998776677888877644 8899999999999


Q ss_pred             HHHHhhhcC-CCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCC
Q 022471          230 IILDFSKNS-DMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII  285 (296)
Q Consensus       230 ~~~~~~~~~-gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  285 (296)
                      +++.++.+. +++++++||+++|||++.+.+|..+...   ...+++.+.+.+.+..
T Consensus       159 ~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~  212 (338)
T 1udb_A          159 ILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGI---PNNLMPYIAQVAVGRR  212 (338)
T ss_dssp             HHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSS---CCSHHHHHHHHHHTSS
T ss_pred             HHHHHHHhcCCCceEEEeeceecCCCcccccccccccc---hhhHHHHHHHHHHhcC
Confidence            999998876 8999999999999998766666543321   1267888887776433

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=3.5e-32  Score=245.24  Aligned_cols=207  Identities=37%  Similarity=0.638  Sum_probs=170.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC------cchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG------NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSEN  144 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~  144 (296)
                      |+||||||+||||++++++|+++|++|++++|+.+.      ..+..+.+....  +.++.++.+|++|.+++++++++.
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   80 (348)
T 1ek6_A            3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT--GRSVEFEEMDILDQGALQRLFKKY   80 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH--TCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhcc--CCceEEEECCCCCHHHHHHHHHhc
Confidence            799999999999999999999999999999986543      233333333221  246889999999999999998655


Q ss_pred             CCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC-CChHHHH
Q 022471          145 AFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP-INPYGKA  223 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~-~~~Y~~s  223 (296)
                      ++|+||||||........+++.+.+++|+.++.++++++++.+.++||++||.++|+.....+++|+.+..| .++|+.|
T Consensus        81 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~s  160 (348)
T 1ek6_A           81 SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKS  160 (348)
T ss_dssp             CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHH
T ss_pred             CCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHH
Confidence            799999999976544345567789999999999999999998889999999999998877778899888777 8999999


Q ss_pred             HHHHHHHHHHhhhc-CCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHh
Q 022471          224 KKMAEDIILDFSKN-SDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAAR  282 (296)
Q Consensus       224 K~~~e~~~~~~~~~-~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  282 (296)
                      |.++|.+++.++.+ .+++++++||++||||++.+.+|......   ...+++.+.+.+.
T Consensus       161 K~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~---~~~~~~~~~~~~~  217 (348)
T 1ek6_A          161 KFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGI---PNNLMPYVSQVAI  217 (348)
T ss_dssp             HHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSS---CCSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccc---hhhHHHHHHHHHH
Confidence            99999999999877 34999999999999998766666543211   1268888888877

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=3e-32  Score=250.04  Aligned_cols=204  Identities=35%  Similarity=0.555  Sum_probs=166.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHH-hCCCeEEEEecCCCCc---------chhhhhhhhhCCC--CCc---eEEEEccCCCHH
Q 022471           71 THVLVTGGAGYIGSHAALRLL-KDSYRVTIVDNLSRGN---------IGAVKVLQELFPE--PGR---LQFIYADLGDAK  135 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~-~~G~~V~~~~r~~~~~---------~~~~~~~~~~~~~--~~~---~~~~~~Dl~d~~  135 (296)
                      |+||||||+||||++++++|+ ++|++|++++|+....         ....+.+++....  ..+   +.++.+|++|.+
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   82 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHH
Confidence            689999999999999999999 9999999999865442         2222222222211  124   889999999999


Q ss_pred             HHHHHhhcCC-CcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCC-------CCC
Q 022471          136 AVNKFFSENA-FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPE-------KMP  207 (296)
Q Consensus       136 ~v~~~~~~~~-~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~-------~~~  207 (296)
                      ++.+++++.+ +|+||||||........+++...+++|+.++.++++++++.+.++||++||.++|+...       ..+
T Consensus        83 ~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~  162 (397)
T 1gy8_A           83 FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEP  162 (397)
T ss_dssp             HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCCC
T ss_pred             HHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCcccccccccC
Confidence            9999986534 99999999976543345567889999999999999999999889999999999998765       568


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHH
Q 022471          208 ITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACF  278 (296)
Q Consensus       208 ~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~  278 (296)
                      ++|+.+..|.++|+.||.++|.+++.++.++|++++++||++||||++.+.+|......    ..+++.++
T Consensus       163 ~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~----~~~~~~~~  229 (397)
T 1gy8_A          163 IDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGS----THLIPIIL  229 (397)
T ss_dssp             BCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTC----CSHHHHHH
T ss_pred             cCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccch----hHHHHHHH
Confidence            89998888899999999999999999998889999999999999998766665543211    26777776

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=2.6e-32  Score=242.48  Aligned_cols=188  Identities=32%  Similarity=0.469  Sum_probs=162.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+|||||||||||++++++|+++|++|++++|+........         ..++.++.+|++|.+ +.++++  + |+||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~~Dl~d~~-~~~~~~--~-d~vi   67 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV---------NPSAELHVRDLKDYS-WGAGIK--G-DVVF   67 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS---------CTTSEEECCCTTSTT-TTTTCC--C-SEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc---------CCCceEEECccccHH-HHhhcC--C-CEEE
Confidence            58999999999999999999999999999998765433211         256889999999998 877774  3 9999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  230 (296)
                      ||||........+++...+++|+.++.++++++++.+.++|||+||.++|+.....+++|+.+..|.++|+.||.++|.+
T Consensus        68 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~  147 (312)
T 3ko8_A           68 HFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVM  147 (312)
T ss_dssp             ECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             ECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Confidence            99997666667778889999999999999999999999999999999999988888899999999999999999999999


Q ss_pred             HHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCC
Q 022471          231 ILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII  285 (296)
Q Consensus       231 ~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  285 (296)
                      ++.++.+.|++++++||++||||+...              .+++.++..+..+.
T Consensus       148 ~~~~~~~~g~~~~~lrp~~v~g~~~~~--------------~~~~~~~~~~~~~~  188 (312)
T 3ko8_A          148 CATYARLFGVRCLAVRYANVVGPRLRH--------------GVIYDFIMKLRRNP  188 (312)
T ss_dssp             HHHHHHHHCCEEEEEEECEEECTTCCS--------------SHHHHHHHHHHHCT
T ss_pred             HHHHHHHhCCCEEEEeeccccCcCCCC--------------ChHHHHHHHHHhCC
Confidence            999999899999999999999997531              45555565555553

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=4.6e-32  Score=245.17  Aligned_cols=206  Identities=26%  Similarity=0.342  Sum_probs=167.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCC--CCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE--PGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      ||+|||||||||||++++++|+++|++|++++|+.....+..+.+.+....  ..++.++.+|++|.+++.+++  .++|
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d  104 (352)
T 1sb8_A           27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC--AGVD  104 (352)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH--TTCS
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHh--cCCC
Confidence            489999999999999999999999999999998764332222222211110  146889999999999999999  4899


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHH
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~  227 (296)
                      +||||||........+++...+++|+.++.++++++++.+.++|||+||.++|+.....+++|+.+..|.++|+.+|.++
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~  184 (352)
T 1sb8_A          105 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVN  184 (352)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHH
T ss_pred             EEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHH
Confidence            99999997654334456778899999999999999999988999999999999987777889999888999999999999


Q ss_pred             HHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          228 EDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       228 e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      |.+++.++.+.|++++++||++||||+.....      .+   ..+++.+++.+..+++
T Consensus       185 e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~------~~---~~~~~~~~~~~~~~~~  234 (352)
T 1sb8_A          185 ELYADVFSRCYGFSTIGLRYFNVFGRRQDPNG------AY---AAVIPKWTSSMIQGDD  234 (352)
T ss_dssp             HHHHHHHHHHHCCCCEEEEECCEECTTCCCCS------TT---CCHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHcCCCEEEEEECceeCcCCCCCc------ch---hhHHHHHHHHHHCCCC
Confidence            99999998888999999999999999853210      00   1456667776666665

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=3.8e-32  Score=241.79  Aligned_cols=174  Identities=33%  Similarity=0.571  Sum_probs=149.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      ||+||||||+||||++++++|+++| .++++++......+..         ...+.++.+|++| +++.+++  .++|+|
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~---------~~~~~~~~~Dl~~-~~~~~~~--~~~d~v   67 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFV---------NEAARLVKADLAA-DDIKDYL--KGAEEV   67 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGS---------CTTEEEECCCTTT-SCCHHHH--TTCSEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhc---------CCCcEEEECcCCh-HHHHHHh--cCCCEE
Confidence            6899999999999999999999999 5555554333221111         2568899999999 8999988  589999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~  229 (296)
                      ||+|+........+++...+++|+.++.++++++++.+.++|||+||.++|+.....+++|+.+..|.++|+.||.++|.
T Consensus        68 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  147 (313)
T 3ehe_A           68 WHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEA  147 (313)
T ss_dssp             EECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             EECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence            99999766666778889999999999999999999999999999999999998888889999999999999999999999


Q ss_pred             HHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          230 IILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       230 ~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                      +++.++.++|++++++||++||||+..
T Consensus       148 ~~~~~~~~~g~~~~ilRp~~v~G~~~~  174 (313)
T 3ehe_A          148 LIESYCHTFDMQAWIYRFANVIGRRST  174 (313)
T ss_dssp             HHHHHHHHTTCEEEEEECSCEESTTCC
T ss_pred             HHHHHHHhcCCCEEEEeeccccCcCCC
Confidence            999999999999999999999999753

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=5.8e-32  Score=241.21  Aligned_cols=189  Identities=24%  Similarity=0.303  Sum_probs=160.2

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      ++|+||||||+||||++++++|+++|++|++++|+... ..    +        ++.++.+|++|.++++++++..++|+
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l--------~~~~~~~Dl~d~~~~~~~~~~~~~d~   77 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P--------NVEMISLDIMDSQRVKKVISDIKPDY   77 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T--------TEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c--------eeeEEECCCCCHHHHHHHHHhcCCCE
Confidence            45899999999999999999999999999999986543 11    1        57889999999999999997656999


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcccccccCC--CCCCCCCCCCCCCCChHHHHHH
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATYGEP--EKMPITEETPQAPINPYGKAKK  225 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-~~~riV~~SS~~~~g~~--~~~~~~e~~~~~~~~~Y~~sK~  225 (296)
                      ||||||........+++...+++|+.++.++++++.+. +.++||++||.++|+..  ...+++|+.+..+.++|+.||.
T Consensus        78 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~  157 (321)
T 2pk3_A           78 IFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKA  157 (321)
T ss_dssp             EEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHH
T ss_pred             EEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHH
Confidence            99999986554455678889999999999999999775 57899999999999876  5668899988889999999999


Q ss_pred             HHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhC
Q 022471          226 MAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARG  283 (296)
Q Consensus       226 ~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  283 (296)
                      ++|.+++.++.++|++++++||++||||+....             .+++.+++.+..
T Consensus       158 ~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~-------------~~~~~~~~~~~~  202 (321)
T 2pk3_A          158 SVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLG-------------FVTQDFAKQIVD  202 (321)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECEEECTTCCTT-------------SHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCC-------------chHHHHHHHHHH
Confidence            999999999888899999999999999985321             456666665554

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=3.5e-32  Score=247.62  Aligned_cols=201  Identities=20%  Similarity=0.308  Sum_probs=168.7

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCC-CHHHHHHHhhcCCC
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG-DAKAVNKFFSENAF  146 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~v~~~~~~~~~  146 (296)
                      .||+||||||||+||++++++|+++ |++|++++|+........+        ..++.++.+|++ |.+.+.++++  ++
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~--------~~~v~~~~~Dl~~d~~~~~~~~~--~~   92 (372)
T 3slg_A           23 KAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK--------HERMHFFEGDITINKEWVEYHVK--KC   92 (372)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG--------STTEEEEECCTTTCHHHHHHHHH--HC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc--------CCCeEEEeCccCCCHHHHHHHhc--cC
Confidence            4589999999999999999999998 9999999987654332221        257899999999 9999999994  69


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCC-------CCCCh
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ-------APINP  219 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~-------~~~~~  219 (296)
                      |+|||+||........+++.+.+++|+.++.++++++++.+ ++|||+||.++|+.....+++|+.+.       .|.++
T Consensus        93 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~  171 (372)
T 3slg_A           93 DVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWI  171 (372)
T ss_dssp             SEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHH
T ss_pred             CEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCc
Confidence            99999999876655566778899999999999999999998 89999999999998777778777654       56779


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          220 YGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       220 Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      |+.||.++|.+++.++.+ |++++++||++||||+....++....     ...+++.+++.+..+++
T Consensus       172 Y~~sK~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~  232 (372)
T 3slg_A          172 YACSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEG-----SSRVVTQFLGHIVRGEN  232 (372)
T ss_dssp             HHHHHHHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSC-----SCHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccc-----cchHHHHHHHHHHcCCC
Confidence            999999999999999987 99999999999999986543222111     13688888888888776

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=100.00  E-value=1e-31  Score=234.30  Aligned_cols=202  Identities=18%  Similarity=0.222  Sum_probs=163.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      ||+||||||+||||++++++|+++|++|++++|+.....            ..++.++.+|++|.+++++++  .++|+|
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~------------~~~~~~~~~Dl~d~~~~~~~~--~~~D~v   68 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA------------GPNEECVQCDLADANAVNAMV--AGCDGI   68 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC------------CTTEEEEECCTTCHHHHHHHH--TTCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc------------CCCCEEEEcCCCCHHHHHHHH--cCCCEE
Confidence            489999999999999999999999999999998764432            357899999999999999999  579999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCC-CCCCCCCCCCCCCCChHHHHHHHHH
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEP-EKMPITEETPQAPINPYGKAKKMAE  228 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~-~~~~~~e~~~~~~~~~Y~~sK~~~e  228 (296)
                      |||||..    ..+..++.+++|+.++.++++++++.+.++||++||..+|+.. ...+++|+.+..+.+.|+.||.++|
T Consensus        69 i~~Ag~~----~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e  144 (267)
T 3rft_A           69 VHLGGIS----VEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGE  144 (267)
T ss_dssp             EECCSCC----SCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHH
T ss_pred             EECCCCc----CcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Confidence            9999973    3456788999999999999999999998999999999999743 4457888889999999999999999


Q ss_pred             HHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCCcceEEEE
Q 022471          229 DIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVCYH  293 (296)
Q Consensus       229 ~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  293 (296)
                      .+++.++.++|+++++|||+.|||+.......    ..+-....+...+...+...+..-.++|.
T Consensus       145 ~~~~~~a~~~g~~~~~vr~~~v~~~~~~~~~~----~~~~~~~d~a~~~~~~~~~~~~~~~~~~~  205 (267)
T 3rft_A          145 NLARMYFDKFGQETALVRIGSCTPEPNNYRML----STWFSHDDFVSLIEAVFRAPVLGCPVVWG  205 (267)
T ss_dssp             HHHHHHHHHHCCCEEEEEECBCSSSCCSTTHH----HHBCCHHHHHHHHHHHHHCSCCCSCEEEE
T ss_pred             HHHHHHHHHhCCeEEEEEeecccCCCCCCCce----eeEEcHHHHHHHHHHHHhCCCCCceEEEE
Confidence            99999998899999999999999975332100    00001113445555555555554445554

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=2.5e-31  Score=238.59  Aligned_cols=198  Identities=26%  Similarity=0.365  Sum_probs=162.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      |+||||||+||||++++++|+++|  ++|++++|......  .+.++.+.. ..++.++.+|++|.+++++++  .++|+
T Consensus         4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~--~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~--~~~d~   78 (336)
T 2hun_A            4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSN--PANLKDLED-DPRYTFVKGDVADYELVKELV--RKVDG   78 (336)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCC--GGGGTTTTT-CTTEEEEECCTTCHHHHHHHH--HTCSE
T ss_pred             CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCc--hhHHhhhcc-CCceEEEEcCCCCHHHHHHHh--hCCCE
Confidence            689999999999999999999997  89999998642211  111122211 357889999999999999998  57999


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCC-CEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHH
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~  227 (296)
                      ||||||........+++...+++|+.++.++++++.+.+. ++||++||.++||.....+++|+.+..+.++|+.||.++
T Consensus        79 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~  158 (336)
T 2hun_A           79 VVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAAS  158 (336)
T ss_dssp             EEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHH
T ss_pred             EEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHH
Confidence            9999997654334456778899999999999999998864 699999999999877667889988888999999999999


Q ss_pred             HHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          228 EDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       228 e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      |.+++.++.++|++++++||++||||+...             ..+++.+++.+..+++
T Consensus       159 e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~-------------~~~~~~~~~~~~~~~~  204 (336)
T 2hun_A          159 DMLVLGWTRTYNLNASITRCTNNYGPYQFP-------------EKLIPKTIIRASLGLK  204 (336)
T ss_dssp             HHHHHHHHHHTTCEEEEEEECEEESTTCCT-------------TSHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHhCCCEEEEeeeeeeCcCCCc-------------CchHHHHHHHHHcCCC
Confidence            999999998899999999999999998431             1567777777777665

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=2.4e-31  Score=236.50  Aligned_cols=185  Identities=19%  Similarity=0.295  Sum_probs=160.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +|+||||||||+||++++++|+++|++|++++|++.. ..    +       .++.++.+|++ .+++.+++  .++|+|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~----~-------~~~~~~~~Dl~-~~~~~~~~--~~~d~V   66 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGN-KA----I-------NDYEYRVSDYT-LEDLINQL--NDVDAV   66 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----------------CCEEEECCCC-HHHHHHHT--TTCSEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCc-cc----C-------CceEEEEcccc-HHHHHHhh--cCCCEE
Confidence            3799999999999999999999999999999987222 11    1       26789999999 99999999  589999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~  229 (296)
                      ||+||.....    ++...+++|+.++.++++++++.+.++|||+||.++|+.....+++|+.+..|.++|+.+|.++|.
T Consensus        67 ih~a~~~~~~----~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  142 (311)
T 3m2p_A           67 VHLAATRGSQ----GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEH  142 (311)
T ss_dssp             EECCCCCCSS----SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHH
T ss_pred             EEccccCCCC----ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHH
Confidence            9999976543    566788999999999999999999999999999999998887889999999999999999999999


Q ss_pred             HHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          230 IILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       230 ~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      +++.++.+.|++++++||++||||+....             .+++.+++.+..+++
T Consensus       143 ~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-------------~~~~~~~~~~~~~~~  186 (311)
T 3m2p_A          143 IGNIYSRKKGLCIKNLRFAHLYGFNEKNN-------------YMINRFFRQAFHGEQ  186 (311)
T ss_dssp             HHHHHHHHSCCEEEEEEECEEECSCC--C-------------CHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHcCCCEEEEeeCceeCcCCCCC-------------CHHHHHHHHHHcCCC
Confidence            99999998999999999999999985421             577788888877766

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=8.1e-32  Score=239.44  Aligned_cols=197  Identities=32%  Similarity=0.440  Sum_probs=162.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+||||||+||||++++++|+++|++|++++|......   +.   .   ..++.++.+|++|.+++++++++.++|+||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~---~~---~---~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi   71 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR---EN---V---PKGVPFFRVDLRDKEGVERAFREFRPTHVS   71 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG---GG---S---CTTCCEECCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch---hh---c---ccCeEEEECCCCCHHHHHHHHHhcCCCEEE
Confidence            47999999999999999999999999999987443221   11   1   135678899999999999998655799999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccc-ccccC-CCCCCCCCCCCCCCCChHHHHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTC-ATYGE-PEKMPITEETPQAPINPYGKAKKMAE  228 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~-~~~g~-~~~~~~~e~~~~~~~~~Y~~sK~~~e  228 (296)
                      |+||........+++...+++|+.++.++++++++.+.++||++||. ++|+. ....+++|+.+..|.++|+.||.++|
T Consensus        72 ~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e  151 (311)
T 2p5y_A           72 HQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFE  151 (311)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHH
T ss_pred             ECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHH
Confidence            99997654334556778999999999999999999888999999998 88986 45557888888888999999999999


Q ss_pred             HHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          229 DIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       229 ~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      .+++.++.++|++++++||++||||+.....          ...+++.+++.+..+++
T Consensus       152 ~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~----------~~~~~~~~~~~~~~~~~  199 (311)
T 2p5y_A          152 HYLSVYGQSYGLKWVSLRYGNVYGPRQDPHG----------EAGVVAIFAERVLKGLP  199 (311)
T ss_dssp             HHHHHHHHHHCCCEEEEEECEEECTTCCSSS----------TTHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHcCCCEEEEeeccccCcCCCCCC----------cCcHHHHHHHHHHcCCC
Confidence            9999998888999999999999999753210          01577888887777665

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=3.4e-31  Score=237.91  Aligned_cols=198  Identities=26%  Similarity=0.348  Sum_probs=163.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhC---C---CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKD---S---YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSEN  144 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~---G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~  144 (296)
                      |+||||||+||||++++++|+++   |   ++|++++|......  .+.++.+. ...++.++.+|++|.+++++++  .
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~--~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~--~   75 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGN--RANLAPVD-ADPRLRFVHGDIRDAGLLAREL--R   75 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCC--GGGGGGGT-TCTTEEEEECCTTCHHHHHHHT--T
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCc--hhhhhhcc-cCCCeEEEEcCCCCHHHHHHHh--c
Confidence            57999999999999999999997   8   99999998643211  11112221 1357889999999999999998  6


Q ss_pred             CCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHH
Q 022471          145 AFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAK  224 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK  224 (296)
                      ++|+||||||........+++.+.+++|+.++.++++++.+.+.++||++||.++||.....+++|+.+..+.++|+.||
T Consensus        76 ~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK  155 (337)
T 1r6d_A           76 GVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASK  155 (337)
T ss_dssp             TCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHH
T ss_pred             CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHH
Confidence            89999999997654333456678899999999999999999998999999999999877667888888888999999999


Q ss_pred             HHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          225 KMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       225 ~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      .++|.+++.++.++|++++++||++||||+...             ..+++.+++.+..+++
T Consensus       156 ~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~-------------~~~~~~~~~~~~~~~~  204 (337)
T 1r6d_A          156 AGSDLVARAYHRTYGLDVRITRCCNNYGPYQHP-------------EKLIPLFVTNLLDGGT  204 (337)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECEEECTTCCT-------------TSHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCC-------------CChHHHHHHHHhcCCC
Confidence            999999999988889999999999999998531             1567777777776665

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.98  E-value=2.4e-31  Score=240.84  Aligned_cols=200  Identities=22%  Similarity=0.227  Sum_probs=165.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+||||||+||||++++++|+++|++|++++|+........+.+.    ...++.++.+|++|.+++.++++..++|+||
T Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   85 (357)
T 1rkx_A           10 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR----VADGMQSEIGDIRDQNKLLESIREFQPEIVF   85 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT----TTTTSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc----cCCceEEEEccccCHHHHHHHHHhcCCCEEE
Confidence            899999999999999999999999999999997655443333221    1357889999999999999998654699999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcccccccCCCC-CCCCCCCCCCCCChHHHHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEPEK-MPITEETPQAPINPYGKAKKMAE  228 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~~riV~~SS~~~~g~~~~-~~~~e~~~~~~~~~Y~~sK~~~e  228 (296)
                      ||||........+++...+++|+.++.++++++.+.+ .++||++||.++|+.... .+++|+.+..+.++|+.||.++|
T Consensus        86 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e  165 (357)
T 1rkx_A           86 HMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAE  165 (357)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHH
T ss_pred             ECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHHH
Confidence            9999654333455677889999999999999999876 789999999999987653 46788878888999999999999


Q ss_pred             HHHHHhhhcC---------CCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          229 DIILDFSKNS---------DMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       229 ~~~~~~~~~~---------gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      .+++.++.++         |++++++||++||||+....            ..+++.+++.+..+++
T Consensus       166 ~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~------------~~~~~~~~~~~~~g~~  220 (357)
T 1rkx_A          166 LVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL------------DRIVPDILRAFEQSQP  220 (357)
T ss_dssp             HHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS------------SCHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCcc------------ccHHHHHHHHHhcCCC
Confidence            9999998764         99999999999999974210            1678888888877765

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.98  E-value=2.5e-31  Score=239.65  Aligned_cols=198  Identities=23%  Similarity=0.305  Sum_probs=160.7

Q ss_pred             CCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        68 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      ..+|+|||||||||||++++++|+++|++|++++|+...               .++.++.+|++|.+++.+++  .++|
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~---------------~~~~~~~~Dl~d~~~~~~~~--~~~d   79 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG---------------TGGEEVVGSLEDGQALSDAI--MGVS   79 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS---------------SCCSEEESCTTCHHHHHHHH--TTCS
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC---------------CCccEEecCcCCHHHHHHHH--hCCC
Confidence            344899999999999999999999999999999986532               35778899999999999999  5899


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccC--CCCCCCCCCCCCCCCChHHHHHH
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGE--PEKMPITEETPQAPINPYGKAKK  225 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~--~~~~~~~e~~~~~~~~~Y~~sK~  225 (296)
                      +|||+|+......  ......+++|+.++.++++++++.+.++|||+||.++|+.  ....+++|+.+..+.+.|+.||.
T Consensus        80 ~vih~A~~~~~~~--~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~  157 (347)
T 4id9_A           80 AVLHLGAFMSWAP--ADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKL  157 (347)
T ss_dssp             EEEECCCCCCSSG--GGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHH
T ss_pred             EEEECCcccCcch--hhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHH
Confidence            9999999765432  2347899999999999999999999999999999999997  56678999999999999999999


Q ss_pred             HHHHHHHHhhhcCCCcEEEEecCeee-------------cCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          226 MAEDIILDFSKNSDMAVMILRYFNVI-------------GSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       226 ~~e~~~~~~~~~~gi~~~~lrpg~v~-------------Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      ++|.+++.++.+.+++++++||++||             ||+......  ..........+++.+++.+..+++
T Consensus       158 ~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  229 (347)
T 4id9_A          158 LGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPR--IHQQQNFGNAAIAELLQSRDIGEP  229 (347)
T ss_dssp             HHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHH--HHHHHHHTCHHHHHHHHHHCCSSC
T ss_pred             HHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccc--cccccccchhHHHHHHHHHHcCCC
Confidence            99999999998899999999999999             664210000  000000002678888888888877

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.98  E-value=4.8e-31  Score=237.83  Aligned_cols=197  Identities=24%  Similarity=0.343  Sum_probs=160.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhC--CCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      ||+||||||+||||++++++|+++  |++|++++|+.....  .+.+..+.  ..++.++.+|++|.+++.+++  .++|
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~--~~~d   77 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGN--KANLEAIL--GDRVELVVGDIADAELVDKLA--AKAD   77 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCC--GGGTGGGC--SSSEEEEECCTTCHHHHHHHH--TTCS
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCC--hhHHhhhc--cCCeEEEECCCCCHHHHHHHh--hcCC
Confidence            589999999999999999999999  899999998653211  11122221  257889999999999999999  5689


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCC------------CCCCCCCCCC
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEK------------MPITEETPQA  215 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~------------~~~~e~~~~~  215 (296)
                      +||||||........+++...+++|+.++.++++++.+.+. +|||+||.++||....            .+++|+.+..
T Consensus        78 ~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~  156 (348)
T 1oc2_A           78 AIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYN  156 (348)
T ss_dssp             EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCC
T ss_pred             EEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCCC
Confidence            99999997654333456678899999999999999999887 9999999999986532            5788888888


Q ss_pred             CCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      +.++|+.||.++|.+++.++.++|++++++||++||||+...             ..+++.+++.+..+++
T Consensus       157 ~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~-------------~~~~~~~~~~~~~~~~  214 (348)
T 1oc2_A          157 PSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHI-------------EKFIPRQITNILAGIK  214 (348)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCT-------------TSHHHHHHHHHHHTCC
T ss_pred             CCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCc-------------cchHHHHHHHHHcCCC
Confidence            899999999999999999988889999999999999998531             1466666666666554

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.98  E-value=2.9e-31  Score=238.90  Aligned_cols=183  Identities=26%  Similarity=0.429  Sum_probs=150.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcc-hhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNI-GAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      ||+||||||+||||++++++|+++|++|++++|+.+... ...+.+..    ..++.++.+|++|.++++++++..++|+
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~----~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   76 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS----LGNFEFVHGDIRNKNDVTRLITKYMPDS   76 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT----TCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc----CCceEEEEcCCCCHHHHHHHHhccCCCE
Confidence            589999999999999999999999999999998653322 12222221    2468899999999999999986545999


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcccccccCCCCC----------------CCCCC
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSSTCATYGEPEKM----------------PITEE  211 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS~~~~g~~~~~----------------~~~e~  211 (296)
                      ||||||........+++...+++|+.++.++++++++.+.+ +||++||.++|+.....                +++|+
T Consensus        77 vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~  156 (347)
T 1orr_A           77 CFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDES  156 (347)
T ss_dssp             EEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTT
T ss_pred             EEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCcccc
Confidence            99999975543344567789999999999999999998875 99999999999865432                25666


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          212 TPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       212 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                      .+..+.++|+.||.++|.+++.++.++|++++++||++||||+..
T Consensus       157 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~  201 (347)
T 1orr_A          157 TQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQF  201 (347)
T ss_dssp             SCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCC
T ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCC
Confidence            677788999999999999999999888999999999999999753

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.98  E-value=1.1e-30  Score=234.18  Aligned_cols=183  Identities=25%  Similarity=0.242  Sum_probs=156.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +|+||||||+||||++++++|+++|++|++++|+......  ..++.+. ...++.++.+|++|.+++.++++..++|+|
T Consensus        14 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V   90 (335)
T 1rpn_A           14 TRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR--WRLRELG-IEGDIQYEDGDMADACSVQRAVIKAQPQEV   90 (335)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC--HHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccc--cchhhcc-ccCceEEEECCCCCHHHHHHHHHHcCCCEE
Confidence            4899999999999999999999999999999987654211  1112111 124688999999999999999865468999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCC-CEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e  228 (296)
                      |||||........+++...+++|+.++.++++++++.+. ++||++||.++|+.....+++|+.+..|.++|+.||.++|
T Consensus        91 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e  170 (335)
T 1rpn_A           91 YNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGH  170 (335)
T ss_dssp             EECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHH
T ss_pred             EECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHHH
Confidence            999997654444567788999999999999999999885 8999999999999877778899999899999999999999


Q ss_pred             HHHHHhhhcCCCcEEEEecCeeecCCC
Q 022471          229 DIILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       229 ~~~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                      .+++.++.+++++++++||+++|||+.
T Consensus       171 ~~~~~~~~~~~~~~~i~r~~~v~Gp~~  197 (335)
T 1rpn_A          171 WITVNYRESFGLHASSGILFNHESPLR  197 (335)
T ss_dssp             HHHHHHHHHHCCCEEEEEECCEECTTS
T ss_pred             HHHHHHHHHcCCcEEEEeeCcccCCCC
Confidence            999999988899999999999999974

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.97  E-value=6.7e-31  Score=238.02  Aligned_cols=200  Identities=24%  Similarity=0.347  Sum_probs=161.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      |+||||||+||||++++++|+++ |++|++++|+.....  .+.+.++.. ..++.++.+|++|.+++.+++++.++|+|
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   77 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN--LESLSDISE-SNRYNFEHADICDSAEITRIFEQYQPDAV   77 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC--GGGGTTTTT-CTTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCc--hhhhhhhhc-CCCeEEEECCCCCHHHHHHHHhhcCCCEE
Confidence            46999999999999999999998 799999998652111  111122211 35789999999999999999965589999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHc--CCC-------EEEEEcccccccCCCC--C--------CCCC
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH--GVD-------TLIYSSTCATYGEPEK--M--------PITE  210 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~-------riV~~SS~~~~g~~~~--~--------~~~e  210 (296)
                      |||||........+++...+++|+.++.++++++.+.  +++       +||++||.++||....  .        +++|
T Consensus        78 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E  157 (361)
T 1kew_A           78 MHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTE  157 (361)
T ss_dssp             EECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCT
T ss_pred             EECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCC
Confidence            9999976543344567789999999999999999988  766       9999999999986532  1        6888


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          211 ETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       211 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      +.+..+.++|+.||.++|.+++.++.++|++++++||++||||+...             ..+++.+++.+..+++
T Consensus       158 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~-------------~~~~~~~~~~~~~~~~  220 (361)
T 1kew_A          158 TTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFP-------------EKLIPLVILNALEGKP  220 (361)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT-------------TSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCc-------------ccHHHHHHHHHHcCCC
Confidence            88888999999999999999999998889999999999999998531             1566777777766654

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.97  E-value=1.7e-30  Score=235.77  Aligned_cols=200  Identities=23%  Similarity=0.340  Sum_probs=162.0

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHh--CCCeEEEEecCCCCcch------hhhhhhhhCCCCCceEEEEccCCCHHHHHHH
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLK--DSYRVTIVDNLSRGNIG------AVKVLQELFPEPGRLQFIYADLGDAKAVNKF  140 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~--~G~~V~~~~r~~~~~~~------~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~  140 (296)
                      .+|+||||||+||||++++++|++  +|++|++++|+......      ........  .+.++.++.+|++|.++++++
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~   86 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNL--IGFKGEVIAADINNPLDLRRL   86 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGG--TTCCSEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhc--cccCceEEECCCCCHHHHHHh
Confidence            348999999999999999999999  99999999986542110      00011111  124678999999999999998


Q ss_pred             hhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChH
Q 022471          141 FSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (296)
Q Consensus       141 ~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (296)
                       ...++|+||||||....  ..+++...+++|+.++.++++++++.+.+ |||+||.++|+.... +++|+.+..|.++|
T Consensus        87 -~~~~~D~vih~A~~~~~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~-~~~E~~~~~p~~~Y  161 (362)
T 3sxp_A           87 -EKLHFDYLFHQAAVSDT--TMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKA-PNVVGKNESPENVY  161 (362)
T ss_dssp             -TTSCCSEEEECCCCCGG--GCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCS-SBCTTSCCCCSSHH
T ss_pred             -hccCCCEEEECCccCCc--cccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCC-CCCCCCCCCCCChh
Confidence             22689999999996543  55788899999999999999999998875 999999999987766 89999999999999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          221 GKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       221 ~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      +.||.++|.+++.++.+  ++++++||++||||+....         .....+++.+++.+..+++
T Consensus       162 ~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~---------~~~~~~~~~~~~~~~~~~~  216 (362)
T 3sxp_A          162 GFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYK---------EKTASMVLQLALGAMAFKE  216 (362)
T ss_dssp             HHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGG---------GGGSCHHHHHHHHHHTTSE
T ss_pred             HHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCC---------CcchhHHHHHHHHHHhCCC
Confidence            99999999999999876  8999999999999985321         0112677888888877766

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.97  E-value=2.1e-30  Score=236.93  Aligned_cols=198  Identities=21%  Similarity=0.240  Sum_probs=160.5

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      .||+||||||+||||++++++|+++|++|++++|+........         ..++.++.+|++|.+++.+++  .++|+
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~v~~~~~Dl~d~~~~~~~~--~~~d~   96 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED---------MFCDEFHLVDLRVMENCLKVT--EGVDH   96 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG---------GTCSEEEECCTTSHHHHHHHH--TTCSE
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc---------cCCceEEECCCCCHHHHHHHh--CCCCE
Confidence            4589999999999999999999999999999998764432111         146789999999999999999  57999


Q ss_pred             EEEcccccCcCC-CCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCC-----CCCCCCC--CCCCCChH
Q 022471          149 VMHFAAVAYVGE-STLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEK-----MPITEET--PQAPINPY  220 (296)
Q Consensus       149 vi~~Ag~~~~~~-~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~-----~~~~e~~--~~~~~~~Y  220 (296)
                      ||||||...... ..+++.+.+++|+.++.++++++++.+.++|||+||.++|+....     .+++|+.  +..+.++|
T Consensus        97 Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y  176 (379)
T 2c5a_A           97 VFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAF  176 (379)
T ss_dssp             EEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHH
T ss_pred             EEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChh
Confidence            999999754322 256778899999999999999999999899999999999975432     3466665  56678999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          221 GKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       221 ~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      +.||.++|.+++.++.++|++++++||++||||+.....+.         ..+++.+++.+..+.+
T Consensus       177 ~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~---------~~~~~~~~~~~~~~~~  233 (379)
T 2c5a_A          177 GLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGR---------EKAPAAFCRKAQTSTD  233 (379)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSC---------CCHHHHHHHHHHHCSS
T ss_pred             HHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCccccc---------ccHHHHHHHHHHhCCC
Confidence            99999999999999888899999999999999975421110         1467777777766655

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.97  E-value=1.3e-30  Score=239.65  Aligned_cols=214  Identities=25%  Similarity=0.223  Sum_probs=158.8

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcch-------------hhhhhh---hhCCCCCceEEEEccCC
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIG-------------AVKVLQ---ELFPEPGRLQFIYADLG  132 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~-------------~~~~~~---~~~~~~~~~~~~~~Dl~  132 (296)
                      .|++||||||+||||++++++|+++|++|++++|..+....             ..+.+.   ...  ..++.++.+|++
T Consensus        10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~v~~~~~Dl~   87 (404)
T 1i24_A           10 HGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT--GKSIELYVGDIC   87 (404)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH--CCCCEEEESCTT
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhcc--CCceEEEECCCC
Confidence            45899999999999999999999999999999875432110             001111   111  246889999999


Q ss_pred             CHHHHHHHhhcCCCcEEEEcccccCcCCCCcChH---HHHHHHHHHHHHHHHHHHHcCC-CEEEEEcccccccCCCCCCC
Q 022471          133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPL---KYYHNITSNTLVVLESMARHGV-DTLIYSSTCATYGEPEKMPI  208 (296)
Q Consensus       133 d~~~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~---~~~~~n~~~t~~ll~~~~~~~~-~riV~~SS~~~~g~~~~~~~  208 (296)
                      |.+++.++++..++|+||||||........+++.   ..+++|+.++.++++++++.+. ++||++||.++|+... .++
T Consensus        88 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~-~~~  166 (404)
T 1i24_A           88 DFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN-IDI  166 (404)
T ss_dssp             SHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-SCB
T ss_pred             CHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCC-CCC
Confidence            9999999986545999999999765433333443   4789999999999999999887 5999999999998654 356


Q ss_pred             CCC--------------CCCCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCC-----CCCCCccccc
Q 022471          209 TEE--------------TPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRL-----GEAPRPELRE  269 (296)
Q Consensus       209 ~e~--------------~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~-----~~~~~~~~~~  269 (296)
                      +|+              .+..|.++|+.||.++|.+++.++.++|++++++||++||||+.....     -....+ .+.
T Consensus       167 ~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~-~~~  245 (404)
T 1i24_A          167 EEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDY-DAV  245 (404)
T ss_dssp             CSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCC-STT
T ss_pred             CccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCcccccccccccccc-ccc
Confidence            654              366778999999999999999998888999999999999999853210     000000 000


Q ss_pred             ccccHHHHHHHHhCCCC
Q 022471          270 HGRISGACFDAARGIIA  286 (296)
Q Consensus       270 ~~~~i~~~~~~~~~~~~  286 (296)
                      ...+++.++..+..+++
T Consensus       246 ~~~~~~~~~~~~~~g~~  262 (404)
T 1i24_A          246 FGTALNRFCVQAAVGHP  262 (404)
T ss_dssp             TCCHHHHHHHHHHHTCC
T ss_pred             hhhHHHHHHHHHHcCCe
Confidence            02567778888777766

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.97  E-value=6e-31  Score=240.24  Aligned_cols=209  Identities=23%  Similarity=0.284  Sum_probs=156.5

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      .||+||||||+|+||++++++|+++| ++|++++|+.....+.   +.    ...++.++.+|++|.+++++++  .++|
T Consensus        31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~---l~----~~~~v~~~~~Dl~d~~~l~~~~--~~~d  101 (377)
T 2q1s_A           31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKIN---VP----DHPAVRFSETSITDDALLASLQ--DEYD  101 (377)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGG---SC----CCTTEEEECSCTTCHHHHHHCC--SCCS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhh---cc----CCCceEEEECCCCCHHHHHHHh--hCCC
Confidence            45899999999999999999999999 9999999865433211   11    1357889999999999999988  4899


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcccccccCCCCCCCC--CCC---CC-CCCChH
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATYGEPEKMPIT--EET---PQ-APINPY  220 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-~~~riV~~SS~~~~g~~~~~~~~--e~~---~~-~~~~~Y  220 (296)
                      +||||||........+++.+.+++|+.++.++++++++. +.++||++||.++|+.....+++  |+.   +. .|.++|
T Consensus       102 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y  181 (377)
T 2q1s_A          102 YVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPY  181 (377)
T ss_dssp             EEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHH
T ss_pred             EEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCch
Confidence            999999976543344567889999999999999999998 88999999999999877666777  776   66 788999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          221 GKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       221 ~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      +.+|.++|.+++.++.+.|++++++||++||||+..+..|.+..........+++.+++.+..+++
T Consensus       182 ~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~  247 (377)
T 2q1s_A          182 SMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMP  247 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCC
Confidence            999999999999998888999999999999999862211111100000002577788887777765

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.97  E-value=5.3e-31  Score=227.16  Aligned_cols=172  Identities=17%  Similarity=0.108  Sum_probs=143.6

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|++|||||++|||+++|+.|+++|++|++++|+....++..+++++.   +.++.++++|++|.+++++++++     
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~---g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   82 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM---GKEVLGVKADVSKKKDVEEFVRRTFETY   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3499999999999999999999999999999998766555555555443   56899999999999999988876     


Q ss_pred             CCCcEEEEcccccCc-CC----CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYV-GE----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~-~~----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                      +++|+||||||+... .+    +++++++.+++|+.+    ++.+++.|++++.++||++||.+.+           .+.
T Consensus        83 G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~-----------~~~  151 (254)
T 4fn4_A           83 SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGI-----------RGG  151 (254)
T ss_dssp             SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-----------CSS
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhc-----------CCC
Confidence            899999999997532 22    344556678899988    5667888888888899999998765           234


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +...+|++||.+...+++.++.|   +||+|++|.||.|..|.
T Consensus       152 ~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~  194 (254)
T 4fn4_A          152 FAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNI  194 (254)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSC
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcc
Confidence            45678999999999999999988   79999999999998875

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.97  E-value=5e-30  Score=230.47  Aligned_cols=171  Identities=14%  Similarity=0.075  Sum_probs=140.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +|+||||||+||||++++++|+++|++|++++|+.......    .     ..+++++.+|++|.+++.+++  .++|+|
T Consensus        13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~-----~~~~~~~~~Dl~d~~~~~~~~--~~~d~v   81 (342)
T 2x4g_A           13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL----A-----YLEPECRVAEMLDHAGLERAL--RGLDGV   81 (342)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG----G-----GGCCEEEECCTTCHHHHHHHT--TTCSEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh----c-----cCCeEEEEecCCCHHHHHHHH--cCCCEE
Confidence            36999999999999999999999999999999876543221    1     136788999999999999999  579999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCC--CCCCCCCCCCC----CChHHHH
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEK--MPITEETPQAP----INPYGKA  223 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~--~~~~e~~~~~~----~~~Y~~s  223 (296)
                      |||||...  ...+++.+.+++|+.++.++++++++.+.++|||+||.++|+....  .+ +|+.+..|    .+.|+.+
T Consensus        82 ih~a~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~-~E~~~~~p~~~~~~~Y~~s  158 (342)
T 2x4g_A           82 IFSAGYYP--SRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPG-HEGLFYDSLPSGKSSYVLC  158 (342)
T ss_dssp             EEC--------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCB-CTTCCCSSCCTTSCHHHHH
T ss_pred             EECCccCc--CCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCC-CCCCCCCccccccChHHHH
Confidence            99999653  2345667789999999999999999999899999999999986554  44 88888888    8999999


Q ss_pred             HHHHHHHHHHhhhcCCCcEEEEecCeeecCCC
Q 022471          224 KKMAEDIILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       224 K~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                      |.++|.+++.++.+ |++++++||++||||+.
T Consensus       159 K~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~  189 (342)
T 2x4g_A          159 KWALDEQAREQARN-GLPVVIGIPGMVLGELD  189 (342)
T ss_dssp             HHHHHHHHHHHHHT-TCCEEEEEECEEECSCC
T ss_pred             HHHHHHHHHHHhhc-CCcEEEEeCCceECCCC
Confidence            99999999999887 99999999999999975

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.97  E-value=3.5e-30  Score=234.20  Aligned_cols=207  Identities=23%  Similarity=0.231  Sum_probs=161.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcc-hhhhhhhh-hCCCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNI-GAVKVLQE-LFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~-~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      ||+||||||+||||++++++|+++|++|++++|+..... ...+.+.. ....+.++.++.+|++|.+++.++++..++|
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence            589999999999999999999999999999998654311 11111110 0001246888999999999999998654689


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCC---CEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHH
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV---DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAK  224 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~---~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK  224 (296)
                      +||||||........+++...+++|+.++.++++++++.+.   ++||++||.++|+.....+++|+.+..|.++|+.||
T Consensus        81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK  160 (372)
T 1db3_A           81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK  160 (372)
T ss_dssp             EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHH
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHH
Confidence            99999998665556677888999999999999999999887   799999999999877767889998888999999999


Q ss_pred             HHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          225 KMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       225 ~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      .++|.+++.++.+++++++++||+++|||+....+       .   ..+++.++..+..+++
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~-------~---~~~~~~~~~~~~~g~~  212 (372)
T 1db3_A          161 LYAYWITVNYRESYGMYACNGILFNHESPRRGETF-------V---TRKITRAIANIAQGLE  212 (372)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTS-------H---HHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcc-------h---hhHHHHHHHHHHcCCC
Confidence            99999999999888999999999999999743210       0   1345556666666653

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.97  E-value=7.6e-30  Score=229.24  Aligned_cols=182  Identities=25%  Similarity=0.260  Sum_probs=156.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+||||||+||||++++++|+++|++|++++|+......  +.++.... ..++.++.+|++|.+++.++++..++|+||
T Consensus         4 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   80 (345)
T 2z1m_A            4 KRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGI-ENDVKIIHMDLLEFSNIIRTIEKVQPDEVY   80 (345)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTC-TTTEEECCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhccc-cCceeEEECCCCCHHHHHHHHHhcCCCEEE
Confidence            899999999999999999999999999999987654321  22222211 246889999999999999998654689999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCC-CEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~  229 (296)
                      ||||......+.+++...+++|+.++.++++++.+.+. ++||++||.++||.....+++|+.+..+.++|+.||.++|.
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~  160 (345)
T 2z1m_A           81 NLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHW  160 (345)
T ss_dssp             ECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             ECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHH
Confidence            99997654444567888999999999999999998886 89999999999998777788998888899999999999999


Q ss_pred             HHHHhhhcCCCcEEEEecCeeecCCC
Q 022471          230 IILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       230 ~~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                      +++.++.+++++++++|+.++|||+.
T Consensus       161 ~~~~~~~~~~~~~~~~r~~~~~gpg~  186 (345)
T 2z1m_A          161 ITVNYREAYNMFACSGILFNHESPLR  186 (345)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEECTTS
T ss_pred             HHHHHHHHhCCceEeeeeeeecCCCC
Confidence            99999988899999999999999974

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.97  E-value=8.5e-31  Score=233.18  Aligned_cols=190  Identities=26%  Similarity=0.380  Sum_probs=155.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +|+||||||||+||++++++|+++|++|++++|+........+.+..... ..++.++.+|++            ++|+|
T Consensus         7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~------------~~d~v   73 (321)
T 3vps_A            7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLE-KPVLELEERDLS------------DVRLV   73 (321)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEEC-SCGGGCCHHHHT------------TEEEE
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhcc-CCCeeEEeCccc------------cCCEE
Confidence            48999999999999999999999999999999876521111111111111 135566666665            68999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~  229 (296)
                      ||+||.........++...++ |+.++.++++++++.++++|||+||.++|+.....+++|+.+..|.+.|+.+|.++|.
T Consensus        74 i~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  152 (321)
T 3vps_A           74 YHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEM  152 (321)
T ss_dssp             EECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             EECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHH
Confidence            999998765445556667778 9999999999999999999999999999998888899999999999999999999999


Q ss_pred             HHHHhhhcCCC-cEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          230 IILDFSKNSDM-AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       230 ~~~~~~~~~gi-~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      +++.++.++++ +++++||++||||+....             .+++.+++.+..+++
T Consensus       153 ~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~-------------~~~~~~~~~~~~~~~  197 (321)
T 3vps_A          153 VAGAHQRASVAPEVGIVRFFNVYGPGERPD-------------ALVPRLCANLLTRNE  197 (321)
T ss_dssp             HHHHHHHSSSSCEEEEEEECEEECTTCCTT-------------SHHHHHHHHHHHHSE
T ss_pred             HHHHHHHHcCCCceEEEEeccccCcCCCCC-------------ChHHHHHHHHHcCCC
Confidence            99999999999 999999999999985421             577788877777665

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=1.1e-29  Score=231.37  Aligned_cols=185  Identities=25%  Similarity=0.264  Sum_probs=153.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcc-hhhhhhhhhCC--CCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNI-GAVKVLQELFP--EPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      |+||||||+||||++++++|+++|++|++++|+..... ...+.+.....  ...++.++.+|++|.+++.++++..++|
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  104 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT  104 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCC
Confidence            68999999999999999999999999999998754311 11111110000  1246889999999999999998654689


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCC---CEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHH
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV---DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAK  224 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~---~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK  224 (296)
                      +||||||........+++...+++|+.++.++++++.+.+.   ++||++||.++|+.....+++|+.+..|.++|+.||
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK  184 (375)
T 1t2a_A          105 EIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAK  184 (375)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHH
T ss_pred             EEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCChhHHHH
Confidence            99999997654334456778899999999999999999886   799999999999877777889998888899999999


Q ss_pred             HHHHHHHHHhhhcCCCcEEEEecCeeecCCC
Q 022471          225 KMAEDIILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       225 ~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                      +++|.+++.++.+++++++++||+++|||+.
T Consensus       185 ~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~  215 (375)
T 1t2a_A          185 LYAYWIVVNFREAYNLFAVNGILFNHESPRR  215 (375)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEECCEECTTS
T ss_pred             HHHHHHHHHHHHHhCCCEEEEecccccCCCC
Confidence            9999999999988899999999999999974

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.97  E-value=4.7e-30  Score=230.77  Aligned_cols=200  Identities=20%  Similarity=0.274  Sum_probs=157.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH-HHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA-KAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~D~  148 (296)
                      |+||||||||+||++++++|+++ |++|++++|+..+....       .. ..++.++.+|++|. +.++++++  ++|+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~-------~~-~~~~~~~~~D~~~~~~~~~~~~~--~~d~   70 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF-------LN-HPHFHFVEGDISIHSEWIEYHVK--KCDV   70 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGG-------TT-CTTEEEEECCTTTCSHHHHHHHH--HCSE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHh-------hc-CCCeEEEeccccCcHHHHHhhcc--CCCE
Confidence            58999999999999999999998 89999999865432211       11 25788999999984 66888874  6999


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCC-------CCCChHH
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ-------APINPYG  221 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~-------~~~~~Y~  221 (296)
                      ||||||.........++.+.+++|+.++.++++++++.+ ++|||+||.++|+.....+++|+.+.       .|.+.|+
T Consensus        71 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~  149 (345)
T 2bll_A           71 VLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYS  149 (345)
T ss_dssp             EEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHH
T ss_pred             EEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccH
Confidence            999999765433345677889999999999999999988 89999999999987766677777643       2445899


Q ss_pred             HHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          222 KAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       222 ~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      .+|.++|.+++.++++.|++++++||++||||+........     .....+++.++..+..+++
T Consensus       150 ~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~  209 (345)
T 2bll_A          150 VSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAAR-----IGSSRAITQLILNLVEGSP  209 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSB-----SCBCHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccc-----cccccHHHHHHHHHHcCCC
Confidence            99999999999998888999999999999999854211000     0011466777777766665

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.97  E-value=1.5e-29  Score=226.93  Aligned_cols=187  Identities=24%  Similarity=0.337  Sum_probs=149.9

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      .+|+||||||+||||++++++|+++|++|++++|+.....+..+   .+    .++.++.+|++|.+++++++++.++|+
T Consensus        19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~l----~~v~~~~~Dl~d~~~~~~~~~~~~~D~   91 (330)
T 2pzm_A           19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLP---PV----AGLSVIEGSVTDAGLLERAFDSFKPTH   91 (330)
T ss_dssp             TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSC---SC----TTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhh---cc----CCceEEEeeCCCHHHHHHHHhhcCCCE
Confidence            34899999999999999999999999999999986543321111   11    468899999999999999985337999


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCC--CCCCCCCCCCCChHHHHHHH
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKM--PITEETPQAPINPYGKAKKM  226 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~--~~~e~~~~~~~~~Y~~sK~~  226 (296)
                      ||||||..... ..+++.  +++|+.++.++++++.+.+.++||++||.++|+.....  +++|+.  .+.++|+.||++
T Consensus        92 vih~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~--~~~~~Y~~sK~~  166 (330)
T 2pzm_A           92 VVHSAAAYKDP-DDWAED--AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPT--APFTSYGISKTA  166 (330)
T ss_dssp             EEECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCC--CCCSHHHHHHHH
T ss_pred             EEECCccCCCc-cccChh--HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCC--CCCChHHHHHHH
Confidence            99999976543 233333  89999999999999999888999999999999865443  677766  678899999999


Q ss_pred             HHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCC
Q 022471          227 AEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII  285 (296)
Q Consensus       227 ~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  285 (296)
                      +|.+++.+    +++++++||+++|||+..              ..+++.+++.+..++
T Consensus       167 ~e~~~~~~----~~~~~~iR~~~v~gp~~~--------------~~~~~~~~~~~~~~~  207 (330)
T 2pzm_A          167 GEAFLMMS----DVPVVSLRLANVTGPRLA--------------IGPIPTFYKRLKAGQ  207 (330)
T ss_dssp             HHHHHHTC----SSCEEEEEECEEECTTCC--------------SSHHHHHHHHHHTTC
T ss_pred             HHHHHHHc----CCCEEEEeeeeeECcCCC--------------CCHHHHHHHHHHcCC
Confidence            99999885    789999999999999831              145666666665544

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.97  E-value=4.3e-30  Score=227.74  Aligned_cols=189  Identities=19%  Similarity=0.176  Sum_probs=154.1

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      .||+||||||||+||++++++|+++|+      +....              ...+.++.+|++|.+++.++++..++|+
T Consensus         5 ~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~--------------~~~~~~~~~D~~d~~~~~~~~~~~~~d~   64 (319)
T 4b8w_A            5 QSMRILVTGGSGLVGKAIQKVVADGAG------LPGED--------------WVFVSSKDADLTDTAQTRALFEKVQPTH   64 (319)
T ss_dssp             CCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE--------------EEECCTTTCCTTSHHHHHHHHHHSCCSE
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc--------------ccccCceecccCCHHHHHHHHhhcCCCE
Confidence            358999999999999999999999998      11000              1234445799999999999997667999


Q ss_pred             EEEcccccCc-CCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCC----CCCCCC-hHHH
Q 022471          149 VMHFAAVAYV-GESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET----PQAPIN-PYGK  222 (296)
Q Consensus       149 vi~~Ag~~~~-~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~----~~~~~~-~Y~~  222 (296)
                      |||+||.... ....+++.+.+++|+.++.++++++++.++++|||+||.++|+.....+++|+.    +..|.. +|+.
T Consensus        65 Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~  144 (319)
T 4b8w_A           65 VIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSY  144 (319)
T ss_dssp             EEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHH
T ss_pred             EEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHH
Confidence            9999997542 234567788999999999999999999999999999999999988888888886    555555 6999


Q ss_pred             HHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHH----HhCCCC
Q 022471          223 AKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDA----ARGIIA  286 (296)
Q Consensus       223 sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~  286 (296)
                      ||.++|.+++.++++.+++++++||++||||+......         .+.+++.+++.    +..+++
T Consensus       145 sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~  203 (319)
T 4b8w_A          145 AKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIE---------DGHVLPGLIHKVHLAKSSGSA  203 (319)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTT---------TSCHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCc---------cccccHHHHHHHHHHhccCCc
Confidence            99999999999998899999999999999998643211         12577777766    677766

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.97  E-value=3.8e-30  Score=226.01  Aligned_cols=173  Identities=20%  Similarity=0.227  Sum_probs=152.7

Q ss_pred             cc-EEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           70 VT-HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k-~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      |+ +||||||||+||++++++|+++|++|++++|.                        ++|++|.+++.+++++.++|+
T Consensus         4 M~m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~------------------------~~D~~d~~~~~~~~~~~~~d~   59 (287)
T 3sc6_A            4 MKERVIITGANGQLGKQLQEELNPEEYDIYPFDKK------------------------LLDITNISQVQQVVQEIRPHI   59 (287)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT------------------------TSCTTCHHHHHHHHHHHCCSE
T ss_pred             ceeEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc------------------------ccCCCCHHHHHHHHHhcCCCE
Confidence            45 99999999999999999999999999999861                        389999999999996557999


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e  228 (296)
                      |||+||.......++++...+++|+.++.++++++++.+. +|||+||.++|+.....+++|+.+..|.++|+.+|.++|
T Consensus        60 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E  138 (287)
T 3sc6_A           60 IIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGE  138 (287)
T ss_dssp             EEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHH
T ss_pred             EEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence            9999998766556678889999999999999999999887 899999999999888889999999999999999999999


Q ss_pred             HHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          229 DIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       229 ~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      .+++.++.    +++++||++||||+..               .+++.+++.+..+.+
T Consensus       139 ~~~~~~~~----~~~ilR~~~v~G~~~~---------------~~~~~~~~~~~~~~~  177 (287)
T 3sc6_A          139 QFVKELHN----KYFIVRTSWLYGKYGN---------------NFVKTMIRLGKEREE  177 (287)
T ss_dssp             HHHHHHCS----SEEEEEECSEECSSSC---------------CHHHHHHHHHTTCSE
T ss_pred             HHHHHhCC----CcEEEeeeeecCCCCC---------------cHHHHHHHHHHcCCC
Confidence            99998754    6899999999999742               577777887777665

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.97  E-value=1.3e-29  Score=216.37  Aligned_cols=166  Identities=14%  Similarity=0.123  Sum_probs=135.4

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-CCCc
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFD  147 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D  147 (296)
                      .+|++|||||++|||+++++.|+++|++|++++|+....++.         ...++..+++|++|.+++++++++ +++|
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~---------~~~~~~~~~~Dv~~~~~v~~~~~~~g~iD   80 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP---------RHPRIRREELDITDSQRLQRLFEALPRLD   80 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC---------CCTTEEEEECCTTCHHHHHHHHHHCSCCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh---------hcCCeEEEEecCCCHHHHHHHHHhcCCCC
Confidence            449999999999999999999999999999999876543321         135788999999999999999987 7899


Q ss_pred             EEEEcccccCcC--CCCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHH
Q 022471          148 AVMHFAAVAYVG--ESTLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYG  221 (296)
Q Consensus       148 ~vi~~Ag~~~~~--~~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~  221 (296)
                      +||||||+....  ...+++++.+++|+.+    ++.+++.|++.+ ++||++||...+           .+.+....|+
T Consensus        81 iLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~-----------~~~~~~~~Y~  148 (242)
T 4b79_A           81 VLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYST-----------FGSADRPAYS  148 (242)
T ss_dssp             EEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGT-----------SCCSSCHHHH
T ss_pred             EEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeecccc-----------CCCCCCHHHH
Confidence            999999985432  2344556678899988    445667666655 799999998765           3344577999


Q ss_pred             HHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          222 KAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       222 ~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      +||.+...+++.++.|   +||+|++|.||.|..|..
T Consensus       149 asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~  185 (242)
T 4b79_A          149 ASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLG  185 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC--
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhh
Confidence            9999999999999988   799999999999988853

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.97  E-value=8.7e-30  Score=228.62  Aligned_cols=200  Identities=20%  Similarity=0.215  Sum_probs=154.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEE-EccCCCHHHHHHHhhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFI-YADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +|+||||||+||||++++++|+++|++|++++|+........+.+....  +.++.++ .+|++|.+++++++  .++|+
T Consensus        11 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~--~~~d~   86 (342)
T 1y1p_A           11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY--PGRFETAVVEDMLKQGAYDEVI--KGAAG   86 (342)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS--TTTEEEEECSCTTSTTTTTTTT--TTCSE
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccC--CCceEEEEecCCcChHHHHHHH--cCCCE
Confidence            3899999999999999999999999999999986443322222222211  1468888 79999999998888  47999


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHH-cCCCEEEEEcccccccCCC----CCCCCCCC-----------
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMAR-HGVDTLIYSSTCATYGEPE----KMPITEET-----------  212 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~-~~~~riV~~SS~~~~g~~~----~~~~~e~~-----------  212 (296)
                      ||||||.....   .++.+.+++|+.++.++++++.+ .+.++||++||.++|+...    ..+++|+.           
T Consensus        87 vih~A~~~~~~---~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  163 (342)
T 1y1p_A           87 VAHIASVVSFS---NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKT  163 (342)
T ss_dssp             EEECCCCCSCC---SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHH
T ss_pred             EEEeCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcc
Confidence            99999976432   46778999999999999999985 5678999999999986432    14567765           


Q ss_pred             -----CCCCCChHHHHHHHHHHHHHHhhhcC--CCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCC
Q 022471          213 -----PQAPINPYGKAKKMAEDIILDFSKNS--DMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII  285 (296)
Q Consensus       213 -----~~~~~~~Y~~sK~~~e~~~~~~~~~~--gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  285 (296)
                           +..|.++|+.||.++|.+++.++.++  +++++++||++||||......          .+.+++.+++.+..++
T Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~----------~~~~~~~~~~~~~~~~  233 (342)
T 1y1p_A          164 LPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPET----------QSGSTSGWMMSLFNGE  233 (342)
T ss_dssp             SCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTT----------CCCHHHHHHHHHHTTC
T ss_pred             ccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCC----------CCccHHHHHHHHHcCC
Confidence                 23456789999999999999998763  799999999999999754210          0136666666666655


Q ss_pred             C
Q 022471          286 A  286 (296)
Q Consensus       286 ~  286 (296)
                      +
T Consensus       234 ~  234 (342)
T 1y1p_A          234 V  234 (342)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.97  E-value=4.3e-30  Score=218.12  Aligned_cols=168  Identities=15%  Similarity=0.184  Sum_probs=140.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      ||+||||||||+||++++++|+++|++|++++|++.+....          ..++.++.+|++|.+++.+++  .++|+|
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----------~~~~~~~~~Dl~d~~~~~~~~--~~~d~v   71 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE----------NEHLKVKKADVSSLDEVCEVC--KGADAV   71 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC----------CTTEEEECCCTTCHHHHHHHH--TTCSEE
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc----------cCceEEEEecCCCHHHHHHHh--cCCCEE
Confidence            58999999999999999999999999999999875433211          257899999999999999999  579999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~  229 (296)
                      |||||....      ..+.+++|+.++.++++++++.+.++||++||.++|+..... ..++.+..|.+.|+.+|.++|.
T Consensus        72 i~~a~~~~~------~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~-~~~~~~~~p~~~Y~~sK~~~e~  144 (227)
T 3dhn_A           72 ISAFNPGWN------NPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGL-RLMDSGEVPENILPGVKALGEF  144 (227)
T ss_dssp             EECCCC------------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTE-EGGGTTCSCGGGHHHHHHHHHH
T ss_pred             EEeCcCCCC------ChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCC-ccccCCcchHHHHHHHHHHHHH
Confidence            999986422      123678899999999999999999999999999877544332 3445667788999999999999


Q ss_pred             HHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          230 IILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       230 ~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                      +++.++++.+++++++||++||||++.
T Consensus       145 ~~~~~~~~~~~~~~ilrp~~v~g~~~~  171 (227)
T 3dhn_A          145 YLNFLMKEKEIDWVFFSPAADMRPGVR  171 (227)
T ss_dssp             HHHTGGGCCSSEEEEEECCSEEESCCC
T ss_pred             HHHHHhhccCccEEEEeCCcccCCCcc
Confidence            999999889999999999999999854

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.97  E-value=9.2e-30  Score=225.91  Aligned_cols=173  Identities=17%  Similarity=0.211  Sum_probs=148.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhC--CCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      |+||||||+||||++++++|+++  |++|++++|+.....     +.      .++.++.+|++|.+++++++++.++|+
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~------~~~~~~~~D~~d~~~~~~~~~~~~~d~   71 (312)
T 2yy7_A            3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VV------NSGPFEVVNALDFNQIEHLVEVHKITD   71 (312)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HH------HSSCEEECCTTCHHHHHHHHHHTTCCE
T ss_pred             ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----cc------CCCceEEecCCCHHHHHHHHhhcCCCE
Confidence            78999999999999999999999  899999998654421     11      246788999999999999996558999


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCC-CCCCCCCCCCCCCChHHHHHHHH
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPE-KMPITEETPQAPINPYGKAKKMA  227 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~-~~~~~e~~~~~~~~~Y~~sK~~~  227 (296)
                      ||||||.... ....++.+.+++|+.++.++++++++.+.++|||+||.++|+... ..+.+|+.+..|.++|+.||.++
T Consensus        72 vih~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~  150 (312)
T 2yy7_A           72 IYLMAALLSA-TAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAG  150 (312)
T ss_dssp             EEECCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHH
T ss_pred             EEECCccCCC-chhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHH
Confidence            9999997543 223567788999999999999999998889999999999998643 35677888888899999999999


Q ss_pred             HHHHHHhhhcCCCcEEEEecCeeecCCC
Q 022471          228 EDIILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       228 e~~~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                      |.+++.++.++|++++++||++||||+.
T Consensus       151 e~~~~~~~~~~~~~~~~lrp~~v~g~~~  178 (312)
T 2yy7_A          151 ERWCEYYHNIYGVDVRSIRYPGLISWST  178 (312)
T ss_dssp             HHHHHHHHHHHCCEEECEEECEEECSSS
T ss_pred             HHHHHHHHHhcCCcEEEEeCCeEecCCC
Confidence            9999999888899999999999999864

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.97  E-value=4.2e-29  Score=224.99  Aligned_cols=196  Identities=29%  Similarity=0.447  Sum_probs=155.6

Q ss_pred             CCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        68 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      ..+|+||||||+|+||++++++|+++|++|++++|+........   ..... ..++.++.+|+.+..     +  .++|
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~-~~~~~~~~~D~~~~~-----~--~~~d   93 (343)
T 2b69_A           25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNV---EHWIG-HENFELINHDVVEPL-----Y--IEVD   93 (343)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGT---GGGTT-CTTEEEEECCTTSCC-----C--CCCS
T ss_pred             cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhh---hhhcc-CCceEEEeCccCChh-----h--cCCC
Confidence            34589999999999999999999999999999998654332211   11111 256889999998752     3  5799


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCC-----CCCCCCChHHH
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE-----TPQAPINPYGK  222 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~-----~~~~~~~~Y~~  222 (296)
                      +||||||.........++...+++|+.++.++++++++.+. ++|++||.++|+.....+++|+     .+..+.+.|+.
T Consensus        94 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~  172 (343)
T 2b69_A           94 QIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDE  172 (343)
T ss_dssp             EEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHH
T ss_pred             EEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHH
Confidence            99999997654434557788899999999999999999886 9999999999987766677776     45667788999


Q ss_pred             HHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          223 AKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       223 sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      ||.++|.+++.++++.+++++++||++||||+....           .+.+++.++..+..+++
T Consensus       173 sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~-----------~~~~~~~~~~~~~~~~~  225 (343)
T 2b69_A          173 GKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN-----------DGRVVSNFILQALQGEP  225 (343)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTT-----------CCCHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCC-----------cccHHHHHHHHHHcCCC
Confidence            999999999999888899999999999999975321           02567777777776665

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.97  E-value=3.5e-30  Score=222.17  Aligned_cols=172  Identities=16%  Similarity=0.103  Sum_probs=140.5

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|++|||||++|||+++++.|+++|++|++++|+....++..+.+++.   +.++.++++|++|.+++++++++     
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK---GYDAHGVAFDVTDELAIEAAFSKLDAEG   84 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT---TCCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence            3499999999999999999999999999999998665555555444443   56789999999999999988876     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHH----HHHHHHHHHc-CCCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNT----LVVLESMARH-GVDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t----~~ll~~~~~~-~~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                      +++|+||||||+....+    ..+++++.+++|+.++    +.+++.|+++ +.++||++||.+.+           .+.
T Consensus        85 G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~-----------~~~  153 (255)
T 4g81_D           85 IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQ-----------AAR  153 (255)
T ss_dssp             CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT-----------SBC
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhc-----------CCC
Confidence            78999999999866554    3344555778899884    5567777654 56799999998775           234


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +...+|+.||.+...+++.++.|   +||+|++|.||.|..|.
T Consensus       154 ~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~  196 (255)
T 4g81_D          154 PTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDM  196 (255)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGG
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCch
Confidence            45778999999999999999988   79999999999998874

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.97  E-value=3.7e-29  Score=226.53  Aligned_cols=194  Identities=21%  Similarity=0.303  Sum_probs=159.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc---CCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NAF  146 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---~~~  146 (296)
                      |+||||||+||||++++++|+++| ++|++++|+.....  .+.+       .++. +.+|++|.+.++++++.   +++
T Consensus        47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~-------~~~~-~~~d~~~~~~~~~~~~~~~~~~~  116 (357)
T 2x6t_A           47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNL-------VDLN-IADYMDKEDFLIQIMAGEEFGDV  116 (357)
T ss_dssp             -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGT-------TTSC-CSEEEEHHHHHHHHHTTCCCSSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhcc-------cCce-EeeecCcHHHHHHHHhhcccCCC
Confidence            789999999999999999999999 99999998654321  1111       1222 67899999999988853   269


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHH
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKM  226 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~  226 (296)
                      |+||||||....  ..+++.+.+++|+.++.++++++.+.+. +||++||.++|+.....+++|+.+..|.++|+.||.+
T Consensus       117 d~Vih~A~~~~~--~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~  193 (357)
T 2x6t_A          117 EAIFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFL  193 (357)
T ss_dssp             CEEEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHH
T ss_pred             CEEEECCcccCC--ccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHH
Confidence            999999997543  4557788999999999999999999888 9999999999988776788998888889999999999


Q ss_pred             HHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          227 AEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       227 ~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      +|.+++.++.+.|++++++||++||||+....      ..   ...+++.+++.+..+++
T Consensus       194 ~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~------~~---~~~~~~~~~~~~~~~~~  244 (357)
T 2x6t_A          194 FDEYVRQILPEANSQIVGFRYFNVYGPREGHK------GS---MASVAFHLNTQLNNGES  244 (357)
T ss_dssp             HHHHHHHHGGGCSSCEEEEEECEEESSSCTTC------GG---GSCHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHcCCCEEEEecCeEECCCCCCC------cc---cchHHHHHHHHHHcCCC
Confidence            99999999988999999999999999975321      00   12577778888777765

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.97  E-value=2e-29  Score=227.70  Aligned_cols=179  Identities=20%  Similarity=0.289  Sum_probs=149.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhC-CC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKD-SY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~-G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      +|+||||||||+||++++++|+++ |+ +|++++|++.+.....+.   +.  ..++.++.+|++|.+++.+++  .++|
T Consensus        21 ~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~---~~--~~~v~~~~~Dl~d~~~l~~~~--~~~D   93 (344)
T 2gn4_A           21 NQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAME---FN--DPRMRFFIGDVRDLERLNYAL--EGVD   93 (344)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHH---HC--CTTEEEEECCTTCHHHHHHHT--TTCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHH---hc--CCCEEEEECCCCCHHHHHHHH--hcCC
Confidence            489999999999999999999999 98 999999864332222222   21  257899999999999999999  5799


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHH
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~  227 (296)
                      +||||||....+..+.++.+.+++|+.++.++++++.+.++++||++||...+              .|.++|+.||+++
T Consensus        94 ~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~--------------~p~~~Y~~sK~~~  159 (344)
T 2gn4_A           94 ICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAA--------------NPINLYGATKLCS  159 (344)
T ss_dssp             EEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGS--------------SCCSHHHHHHHHH
T ss_pred             EEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccC--------------CCccHHHHHHHHH
Confidence            99999998664444556788999999999999999999999999999996654              2468999999999


Q ss_pred             HHHHHHhhhc---CCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCC
Q 022471          228 EDIILDFSKN---SDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII  285 (296)
Q Consensus       228 e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  285 (296)
                      |.++++++.+   .|++++++|||+||||+.                .+++.+.+++..++
T Consensus       160 E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~----------------~~i~~~~~~~~~g~  204 (344)
T 2gn4_A          160 DKLFVSANNFKGSSQTQFSVVRYGNVVGSRG----------------SVVPFFKKLVQNKA  204 (344)
T ss_dssp             HHHHHHGGGCCCSSCCEEEEECCCEETTCTT----------------SHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHhCCCCcEEEEEEeccEECCCC----------------CHHHHHHHHHHcCC
Confidence            9999999875   689999999999999862                57788888877776

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.97  E-value=9.8e-30  Score=217.60  Aligned_cols=170  Identities=14%  Similarity=0.158  Sum_probs=139.6

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      .+|++|||||++|||+++++.|+++|++|++++|+..  ++..+.+++.   +.++.++.+|++|.++++++++.+++|+
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~---g~~~~~~~~Dv~d~~~v~~~~~~g~iDi   82 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKD---GGNASALLIDFADPLAAKDSFTDAGFDI   82 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHT---TCCEEEEECCTTSTTTTTTSSTTTCCCE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHh---CCcEEEEEccCCCHHHHHHHHHhCCCCE
Confidence            3499999999999999999999999999999998542  3444444443   5678999999999999999988899999


Q ss_pred             EEEcccccCcCC----CCcChHHHHHHHHHHH----HHHHHHHHHcC-CCEEEEEcccccccCCCCCCCCCCCCCCCCCh
Q 022471          149 VMHFAAVAYVGE----STLDPLKYYHNITSNT----LVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (296)
Q Consensus       149 vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t----~~ll~~~~~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~  219 (296)
                      ||||||+....+    +++++++.+++|+.++    +.+++.|++++ .++||++||...+           .+.+....
T Consensus        83 LVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~-----------~g~~~~~~  151 (247)
T 4hp8_A           83 LVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSF-----------QGGIRVPS  151 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT-----------SCCSSCHH
T ss_pred             EEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhC-----------CCCCCChH
Confidence            999999866544    3444556778899884    44666777665 5799999998765           23344678


Q ss_pred             HHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          220 YGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       220 Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      |++||.+...+++.++.|   +||+|++|.||.|..|.
T Consensus       152 Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~  189 (247)
T 4hp8_A          152 YTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNN  189 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcc
Confidence            999999999999999988   79999999999998875

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.97  E-value=6.5e-29  Score=243.90  Aligned_cols=209  Identities=41%  Similarity=0.664  Sum_probs=168.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +|+||||||+||||++++++|+++|++|++++|+........+.++...  ..++.++.+|++|.+++++++++.++|+|
T Consensus        11 ~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~v~~v~~Dl~d~~~l~~~~~~~~~D~V   88 (699)
T 1z45_A           11 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT--KHHIPFYEVDLCDRKGLEKVFKEYKIDSV   88 (699)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH--TSCCCEEECCTTCHHHHHHHHHHSCCCEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhcc--CCceEEEEcCCCCHHHHHHHHHhCCCCEE
Confidence            4899999999999999999999999999999987654433333333221  24678899999999999999865579999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCC----CCCCCCCCCCCCCChHHHHHH
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPE----KMPITEETPQAPINPYGKAKK  225 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~----~~~~~e~~~~~~~~~Y~~sK~  225 (296)
                      |||||........+.+.+.+++|+.++.++++++++.+.++||++||.++|+...    ..+++|+.+..|.++|+.||+
T Consensus        89 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~  168 (699)
T 1z45_A           89 IHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKY  168 (699)
T ss_dssp             EECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHH
T ss_pred             EECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHHHH
Confidence            9999976543344566778999999999999999999889999999999998643    246788888888999999999


Q ss_pred             HHHHHHHHhhhc--CCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhC
Q 022471          226 MAEDIILDFSKN--SDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARG  283 (296)
Q Consensus       226 ~~e~~~~~~~~~--~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  283 (296)
                      ++|.+++.++.+  .+++++++||++||||++...+|.+....   ...+++.+.+.+.+
T Consensus       169 ~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~---~~~~~~~~~~~~~~  225 (699)
T 1z45_A          169 AIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGI---PNNLLPYMAQVAVG  225 (699)
T ss_dssp             HHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSS---CCSHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccc---hhHHHHHHHHHHhc
Confidence            999999999876  79999999999999998776666543211   12577777766654

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.97  E-value=1.8e-29  Score=221.64  Aligned_cols=174  Identities=21%  Similarity=0.209  Sum_probs=140.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+||||||+||||++++++|+++|++|++++|+....++..+.+++......++.++.+|++|.+++++++++     +
T Consensus        11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   90 (281)
T 3svt_A           11 DRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHG   90 (281)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            39999999999999999999999999999999876555555555554433234789999999999999988865     6


Q ss_pred             CCcEEEEcccccC-cC----CCCcChHHHHHHHHHHHHHHHH----HHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAY-VG----ESTLDPLKYYHNITSNTLVVLE----SMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~-~~----~~~~~~~~~~~~n~~~t~~ll~----~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||... ..    ...++++..+++|+.++.++++    .|++.+.++||++||.+.+           .+.+
T Consensus        91 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~~  159 (281)
T 3svt_A           91 RLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAAS-----------NTHR  159 (281)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHH-----------SCCT
T ss_pred             CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHc-----------CCCC
Confidence            8999999999732 22    2334456688899999766555    4555666799999998877           2344


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.||++.+.+++.++.|   +||++++++||.|+++.
T Consensus       160 ~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~  201 (281)
T 3svt_A          160 WFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDL  201 (281)
T ss_dssp             TCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred             CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcc
Confidence            5789999999999999999987   57999999999999875

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.97  E-value=8.3e-29  Score=222.72  Aligned_cols=196  Identities=21%  Similarity=0.298  Sum_probs=161.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCC-------CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhh
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDS-------YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS  142 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~  142 (296)
                      +|+||||||+||||++++++|+++|       ++|++++|+......         ....++.++.+|++|.++++++++
T Consensus        14 ~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~---------~~~~~~~~~~~Dl~d~~~~~~~~~   84 (342)
T 2hrz_A           14 GMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA---------GFSGAVDARAADLSAPGEAEKLVE   84 (342)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT---------TCCSEEEEEECCTTSTTHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc---------ccCCceeEEEcCCCCHHHHHHHHh
Confidence            4899999999999999999999999       899999986543221         013578899999999999999885


Q ss_pred             cCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcC-----CCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          143 ENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-----VDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       143 ~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-----~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                       .++|+||||||.... ...+++.+.+++|+.++.++++++++.+     .++||++||.++|+.....+++|+.+..+.
T Consensus        85 -~~~d~vih~A~~~~~-~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~  162 (342)
T 2hrz_A           85 -ARPDVIFHLAAIVSG-EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPL  162 (342)
T ss_dssp             -TCCSEEEECCCCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCS
T ss_pred             -cCCCEEEECCccCcc-cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCc
Confidence             479999999997542 2345677889999999999999998876     789999999999987656688999998899


Q ss_pred             ChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeec-CCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          218 NPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIG-SDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~G-p~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      ++|+.||.++|.+++.++.+.+++.+++|++.||| |+...      .+.    ..+++.+++.+..+++
T Consensus       163 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~------~~~----~~~~~~~~~~~~~~~~  222 (342)
T 2hrz_A          163 TSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPN------AAA----SGFFSNILREPLVGQE  222 (342)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCC------CSG----GGHHHHHHHHHHTTCC
T ss_pred             chHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCc------chh----HHHHHHHHHHHhcCCC
Confidence            99999999999999999988899999999999999 65311      000    1567777777777665

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.96  E-value=1.2e-28  Score=221.36  Aligned_cols=185  Identities=23%  Similarity=0.266  Sum_probs=148.6

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      .||+||||||+||||++++++|+++|++|++++|+.....+   .+..    ..++.++.+|++|.++++++++..++|+
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~l~~----~~~~~~~~~Dl~d~~~~~~~~~~~~~D~   92 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRRE---HLKD----HPNLTFVEGSIADHALVNQLIGDLQPDA   92 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GSCC----CTTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchh---hHhh----cCCceEEEEeCCCHHHHHHHHhccCCcE
Confidence            45899999999999999999999999999999986543221   1111    1468899999999999999986556999


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccccccc----CCCCCCCCCCCCCCCC-ChHHHH
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYG----EPEKMPITEETPQAPI-NPYGKA  223 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g----~~~~~~~~e~~~~~~~-~~Y~~s  223 (296)
                      ||||||..... ...++.  +++|+.++.++++++.+.+.++||++||.++|+    .... +++|+.  .|. ++|+.|
T Consensus        93 vih~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~--~p~~~~Y~~s  166 (333)
T 2q1w_A           93 VVHTAASYKDP-DDWYND--TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHPR--NPANSSYAIS  166 (333)
T ss_dssp             EEECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSCC--CCTTCHHHHH
T ss_pred             EEECceecCCC-ccCChH--HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCCC--CCCCCchHHH
Confidence            99999976543 223333  899999999999999999889999999999998    5444 677776  566 899999


Q ss_pred             HHHHHHHHHH-hhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCC
Q 022471          224 KKMAEDIILD-FSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII  285 (296)
Q Consensus       224 K~~~e~~~~~-~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  285 (296)
                      |.++|.+++. ++     +++++||+++|||+..              ..+++.+++.+..++
T Consensus       167 K~~~E~~~~~s~~-----~~~ilR~~~v~gp~~~--------------~~~~~~~~~~~~~~~  210 (333)
T 2q1w_A          167 KSANEDYLEYSGL-----DFVTFRLANVVGPRNV--------------SGPLPIFFQRLSEGK  210 (333)
T ss_dssp             HHHHHHHHHHHTC-----CEEEEEESEEESTTCC--------------SSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHhhhC-----CeEEEeeceEECcCCc--------------CcHHHHHHHHHHcCC
Confidence            9999999988 75     7999999999999721              156777777666654

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.96  E-value=3.1e-29  Score=218.23  Aligned_cols=165  Identities=22%  Similarity=0.304  Sum_probs=145.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      ||+||||||+|+||++++++|+++|++|++++|+.....            ..++.++.+|++|.+++.+++  .++|+|
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------------~~~~~~~~~Dl~d~~~~~~~~--~~~d~v   67 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA------------EAHEEIVACDLADAQAVHDLV--KDCDGI   67 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC------------CTTEEECCCCTTCHHHHHHHH--TTCSEE
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc------------CCCccEEEccCCCHHHHHHHH--cCCCEE
Confidence            478999999999999999999999999999998654311            135688899999999999999  579999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCC-CCCCCCCCCCCCCCChHHHHHHHHH
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEP-EKMPITEETPQAPINPYGKAKKMAE  228 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~-~~~~~~e~~~~~~~~~Y~~sK~~~e  228 (296)
                      |||||..    ..+.....+++|+.++.++++++++.+.++||++||..+|+.. ...+++|+.+..|.++|+.||.++|
T Consensus        68 i~~a~~~----~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e  143 (267)
T 3ay3_A           68 IHLGGVS----VERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGE  143 (267)
T ss_dssp             EECCSCC----SCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHH
T ss_pred             EECCcCC----CCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Confidence            9999975    2345678899999999999999999888999999999999864 3467899999889999999999999


Q ss_pred             HHHHHhhhcCCCcEEEEecCeeec
Q 022471          229 DIILDFSKNSDMAVMILRYFNVIG  252 (296)
Q Consensus       229 ~~~~~~~~~~gi~~~~lrpg~v~G  252 (296)
                      .+++.++.++|++++++||+++|+
T Consensus       144 ~~~~~~~~~~gi~~~~lrp~~v~~  167 (267)
T 3ay3_A          144 DLASLYYHKFDIETLNIRIGSCFP  167 (267)
T ss_dssp             HHHHHHHHTTCCCEEEEEECBCSS
T ss_pred             HHHHHHHHHcCCCEEEEeceeecC
Confidence            999999888999999999999994

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.96  E-value=3.7e-29  Score=219.59  Aligned_cols=176  Identities=14%  Similarity=0.111  Sum_probs=139.9

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC---------cchhhhhhhhhCCCCCceEEEEccCCCHHHHHH
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG---------NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNK  139 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~---------~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~  139 (296)
                      .+|++|||||+||||++++++|+++|++|++++|+...         .+...+..+.....+.++.++++|++|.+++++
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   88 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            34999999999999999999999999999999986432         222222222222234678999999999999998


Q ss_pred             Hhhc-----CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHH----HHHcCCCEEEEEcccccccCCCCC
Q 022471          140 FFSE-----NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLES----MARHGVDTLIYSSTCATYGEPEKM  206 (296)
Q Consensus       140 ~~~~-----~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~----~~~~~~~riV~~SS~~~~g~~~~~  206 (296)
                      ++++     +++|+||||||+.....    ..+++++.+++|+.++..++++    |++.+.++||++||...+      
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~------  162 (281)
T 3s55_A           89 FVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGH------  162 (281)
T ss_dssp             HHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGG------
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhc------
Confidence            8865     68999999999865433    3344556788999997765555    566677899999998876      


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          207 PITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       207 ~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                           .+.++...|+.||++.+.+++.++.|   +||++++|+||+|++|..
T Consensus       163 -----~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~  209 (281)
T 3s55_A          163 -----SANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMT  209 (281)
T ss_dssp             -----SCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTT
T ss_pred             -----CCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccc
Confidence                 33445789999999999999999987   689999999999999864

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.96  E-value=5.6e-29  Score=227.28  Aligned_cols=184  Identities=22%  Similarity=0.234  Sum_probs=150.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcc--hhhhhhhhhCCCCC-ceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNI--GAVKVLQELFPEPG-RLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      |+||||||+||||++++++|+++|++|++++|+.....  ............+. ++.++.+|++|.+++.++++..++|
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  108 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD  108 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence            68999999999999999999999999999998764311  11111010000112 6889999999999999998654689


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-----EEEEEcccccccCCCCCCCCCCCCCCCCChHHH
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-----TLIYSSTCATYGEPEKMPITEETPQAPINPYGK  222 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-----riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~  222 (296)
                      +||||||........+++...+++|+.++.++++++.+.+.+     +|||+||.++|+.... +++|+.+..|.++|+.
T Consensus       109 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~~~E~~~~~~~~~Y~~  187 (381)
T 1n7h_A          109 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAA  187 (381)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTTSCCCCCSHHHH
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-CCCCCCCCCCCCchHH
Confidence            999999976544345567788999999999999999887643     9999999999987766 8899988889999999


Q ss_pred             HHHHHHHHHHHhhhcCCCcEEEEecCeeecCCC
Q 022471          223 AKKMAEDIILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       223 sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                      ||.++|.+++.++.+++++++++|++++|||+.
T Consensus       188 sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~  220 (381)
T 1n7h_A          188 SKCAAHWYTVNYREAYGLFACNGILFNHESPRR  220 (381)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECCEECTTS
T ss_pred             HHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCC
Confidence            999999999999988899999999999999974

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.96  E-value=6.4e-29  Score=214.97  Aligned_cols=170  Identities=14%  Similarity=0.120  Sum_probs=137.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||++|||+++++.|+++|++|++++|+....+ ..+.+.+.   +.++.++.+|++|.+++++++++     +
T Consensus         7 gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G   82 (258)
T 4gkb_A            7 DKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQR---QPRATYLPVELQDDAQCRDAVAQTIATFG   82 (258)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhc---CCCEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            399999999999999999999999999999998765533 23333333   46789999999999999888866     8


Q ss_pred             CCcEEEEcccccCcCC---CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE---STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~---~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      ++|+||||||+.....   ..+++...+++|+.+    ++.+++.|++.+ ++||++||.+.+           .+.+..
T Consensus        83 ~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~-----------~~~~~~  150 (258)
T 4gkb_A           83 RLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR-GAIVNISSKTAV-----------TGQGNT  150 (258)
T ss_dssp             CCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTHHH-----------HCCSSC
T ss_pred             CCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEeehhhc-----------cCCCCc
Confidence            9999999999854333   334455577889888    445667776655 799999998775           233447


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      ..|++||.+.+.+++.++.|   +||+|++|.||.|..|..
T Consensus       151 ~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~  191 (258)
T 4gkb_A          151 SGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLY  191 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhH
Confidence            78999999999999999988   799999999999988764

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.96  E-value=2.9e-29  Score=220.20  Aligned_cols=169  Identities=17%  Similarity=0.150  Sum_probs=140.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+||||||+||||++++++|+++|++|++++|+....++..   ++.   +.++.++.+|++|.+++++++++     +
T Consensus         5 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~---~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   78 (281)
T 3m1a_A            5 AKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLV---AAY---PDRAEAISLDVTDGERIDVVAADVLARYG   78 (281)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH---HHC---TTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---Hhc---cCCceEEEeeCCCHHHHHHHHHHHHHhCC
Confidence            489999999999999999999999999999998654433222   222   35789999999999999988865     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||......    ..++....+++|+.+    ++.+++.|++.+.++||++||...+           .+.++
T Consensus        79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-----------~~~~~  147 (281)
T 3m1a_A           79 RVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQ-----------LSFAG  147 (281)
T ss_dssp             CCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-----------CCCTT
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCcccc-----------CCCCC
Confidence            8999999999865433    334455678899999    7778888888888899999998776           34556


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      .++|+.||++.+.+++.++.+   +|+++++++||.|++|..
T Consensus       148 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  189 (281)
T 3m1a_A          148 FSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLF  189 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTT
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccc
Confidence            789999999999999999988   799999999999998763

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.96  E-value=8.5e-29  Score=216.33  Aligned_cols=170  Identities=15%  Similarity=0.077  Sum_probs=139.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.+      +.++.++.+|++|.+++++++++     +
T Consensus        11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   84 (271)
T 3tzq_B           11 NKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV------GRGAVHHVVDLTNEVSVRALIDFTIDTFG   84 (271)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH------CTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh------CCCeEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999998766544443332      35788999999999999988865     6


Q ss_pred             CCcEEEEcccccCc------CCCCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYV------GESTLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~------~~~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                      ++|+||||||....      ....+.+++.+++|+.++..+++++    ++.+.++||++||...+           .+.
T Consensus        85 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~-----------~~~  153 (271)
T 3tzq_B           85 RLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAH-----------AAY  153 (271)
T ss_dssp             CCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGT-----------SBC
T ss_pred             CCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHc-----------CCC
Confidence            89999999998632      1234455678899999977765555    77777899999998876           234


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~~  256 (296)
                      ++...|+.||++.+.+++.++.|   +|+++++|+||.|++|...
T Consensus       154 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~  198 (271)
T 3tzq_B          154 DMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLE  198 (271)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCcccc
Confidence            45789999999999999999988   7999999999999998643

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.96  E-value=3.3e-29  Score=221.17  Aligned_cols=175  Identities=18%  Similarity=0.207  Sum_probs=149.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+||||||+|+||++++++|+ +|++|++++|+..                    ++.+|++|.+++.++++..++|+||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~--------------------~~~~D~~d~~~~~~~~~~~~~d~vi   59 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK--------------------EFCGDFSNPKGVAETVRKLRPDVIV   59 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS--------------------SSCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc--------------------cccccCCCHHHHHHHHHhcCCCEEE
Confidence            479999999999999999999 8999999987541                    2368999999999998644699999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  230 (296)
                      |+||........+++.+.+++|+.++.++++++++.+. ++||+||.++|+.....+++|+.+..|.++|+.+|.++|.+
T Consensus        60 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~  138 (299)
T 1n2s_A           60 NAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKA  138 (299)
T ss_dssp             ECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHH
T ss_pred             ECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHH
Confidence            99997654445567888999999999999999998876 89999999999987777889999989999999999999999


Q ss_pred             HHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          231 ILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       231 ~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      ++.++.    +++++||+++|||+..               .+++.+++.+..+++
T Consensus       139 ~~~~~~----~~~ilRp~~v~G~~~~---------------~~~~~~~~~~~~~~~  175 (299)
T 1n2s_A          139 LQDNCP----KHLIFRTSWVYAGKGN---------------NFAKTMLRLAKERQT  175 (299)
T ss_dssp             HHHHCS----SEEEEEECSEECSSSC---------------CHHHHHHHHHHHCSE
T ss_pred             HHHhCC----CeEEEeeeeecCCCcC---------------cHHHHHHHHHhcCCC
Confidence            998753    8999999999999742               466667777766665

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.96  E-value=4.1e-29  Score=216.59  Aligned_cols=171  Identities=14%  Similarity=0.116  Sum_probs=140.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.++..   +.++.++.+|++|.+++++++++     +
T Consensus        12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   88 (256)
T 3gaf_A           12 DAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA---GGKAIGLECNVTDEQHREAVIKAALDQFG   88 (256)
T ss_dssp             TCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            499999999999999999999999999999998665544444444432   46789999999999999888865     6


Q ss_pred             CCcEEEEcccccCcCC---CCcChHHHHHHHHHHHHHHHHH----HHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE---STLDPLKYYHNITSNTLVVLES----MARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~---~~~~~~~~~~~n~~~t~~ll~~----~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      ++|+||||||......   ..++++..+++|+.++..++++    |++.+.++||++||.+.+           .+.++.
T Consensus        89 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~~~~  157 (256)
T 3gaf_A           89 KITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGE-----------NTNVRM  157 (256)
T ss_dssp             CCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGT-----------CCCTTC
T ss_pred             CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHc-----------CCCCCc
Confidence            8999999999865433   3344566788999997665554    566677899999998876           344557


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..|+.||++.+.+++.++.|   +|+++++++||.|.++.
T Consensus       158 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~  197 (256)
T 3gaf_A          158 ASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDA  197 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCch
Confidence            89999999999999999988   68999999999999874

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.96  E-value=6.7e-29  Score=213.90  Aligned_cols=171  Identities=16%  Similarity=0.132  Sum_probs=137.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC-CCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      |++|||||+||||++++++|+++|++|++++++. ...++..+.++.   .+.++.++++|++|.+++++++++     +
T Consensus         5 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKA---KGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH---TTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            8999999999999999999999999999988643 222233333332   246788999999999999988865     6


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||+.....    ..++++..+++|+.++.++++++    ++.+.++||++||...+.           +.++
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  150 (246)
T 3osu_A           82 SLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAV-----------GNPG  150 (246)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-----------CCTT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcC-----------CCCC
Confidence            8999999999865433    33445568889999977766555    667778999999987662           3345


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      ...|+.||++.+.+++.++.|   +|+++++++||.|+++..
T Consensus       151 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~  192 (246)
T 3osu_A          151 QANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMT  192 (246)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCC
T ss_pred             ChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcc
Confidence            789999999999999999986   789999999999999863

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.96  E-value=7.1e-29  Score=212.98  Aligned_cols=166  Identities=16%  Similarity=0.174  Sum_probs=134.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+||||||++|||+++|+.|+++|++|++++|++....    .+.   .+..++.++++|++|.+++++++++     ++
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~----~~~---~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~   75 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSA----DFA---KERPNLFYFHGDVADPLTLKKFVEYAMEKLQR   75 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HHH---TTCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHH---HhcCCEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            89999999999999999999999999999997543222    222   1246788999999999999988865     89


Q ss_pred             CcEEEEcccccCcCC----CCcChHHHHHHHHHHHH----HHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGE----STLDPLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~----~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +|+||||||.....+    ..++++..+++|+.++.    .+++.|++++ ++||++||...+           .+.+..
T Consensus        76 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~-----------~~~~~~  143 (247)
T 3ged_A           76 IDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAF-----------QSEPDS  143 (247)
T ss_dssp             CCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGT-----------SCCTTC
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccc-----------cCCCCC
Confidence            999999999865544    33445567889999854    4666776665 799999998775           334456


Q ss_pred             ChHHHHHHHHHHHHHHhhhc--CCCcEEEEecCeeecCCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN--SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~--~gi~~~~lrpg~v~Gp~~  255 (296)
                      .+|++||.+...+++.++.|  .||+|++|.||.|-.+..
T Consensus       144 ~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~  183 (247)
T 3ged_A          144 EAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQ  183 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC-
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCc
Confidence            78999999999999999988  689999999999987753

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.96  E-value=9.5e-29  Score=219.02  Aligned_cols=193  Identities=22%  Similarity=0.313  Sum_probs=156.0

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc---CCCc
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NAFD  147 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---~~~D  147 (296)
                      +||||||||+||++++++|+++| ++|++++|......  .+.+.       ++. +.+|++|.+.++++++.   .++|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~-------~~~-~~~d~~~~~~~~~~~~~~~~~~~d   70 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV-------DLN-IADYMDKEDFLIQIMAGEEFGDVE   70 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH-------TSC-CSEEEEHHHHHHHHHTTCCCSSCC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC-------cce-eccccccHHHHHHHHhccccCCCc
Confidence            48999999999999999999999 99999998654321  11111       122 67899999999988853   2699


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHH
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~  227 (296)
                      +||||||....  ...++.+.+++|+.++.++++++++.+. +||++||.++|+.....+++|+.+..|.++|+.+|.++
T Consensus        71 ~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~  147 (310)
T 1eq2_A           71 AIFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLF  147 (310)
T ss_dssp             EEEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHH
T ss_pred             EEEECcccccC--cccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHH
Confidence            99999997643  4567788999999999999999999988 99999999999887766888988888899999999999


Q ss_pred             HHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          228 EDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       228 e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      |.+++.++.+.|++++++||++||||+....         .....+++.+++.+..+++
T Consensus       148 e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~---------~~~~~~~~~~~~~~~~~~~  197 (310)
T 1eq2_A          148 DEYVRQILPEANSQIVGFRYFNVYGPREGHK---------GSMASVAFHLNTQLNNGES  197 (310)
T ss_dssp             HHHHHHHGGGCSSCEEEEEECEEESSSCGGG---------GGGSCHHHHHHHHHHC---
T ss_pred             HHHHHHHHHHcCCCEEEEeCCcEECcCCCCC---------CccchHHHHHHHHHHcCCC
Confidence            9999999988999999999999999975310         0012577777777777665

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.96  E-value=1.6e-28  Score=218.55  Aligned_cols=169  Identities=25%  Similarity=0.377  Sum_probs=145.8

Q ss_pred             EEEEEcCCChhhHHHHHHHHhC--CCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           72 HVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +||||||+||||++++++|+++  |++|++++|+....              .++.++.+|++|.+++.+++++.++|+|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~--------------~~~~~~~~D~~d~~~~~~~~~~~~~d~v   66 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT--------------GGIKFITLDVSNRDEIDRAVEKYSIDAI   66 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC--------------TTCCEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc--------------cCceEEEecCCCHHHHHHHHhhcCCcEE
Confidence            4899999999999999999999  89999999764321              1356889999999999999975589999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCC-CCCCCCCCCCCCCCChHHHHHHHHH
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEP-EKMPITEETPQAPINPYGKAKKMAE  228 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~-~~~~~~e~~~~~~~~~Y~~sK~~~e  228 (296)
                      |||||.... ...+++...+++|+.++.++++++++.+.++||++||.++|+.. ...+.+|+.+..|.++|+.||.++|
T Consensus        67 ih~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e  145 (317)
T 3ajr_A           67 FHLAGILSA-KGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAE  145 (317)
T ss_dssp             EECCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHH
T ss_pred             EECCcccCC-ccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHH
Confidence            999997532 22356778899999999999999999998999999999999864 3346777788888999999999999


Q ss_pred             HHHHHhhhcCCCcEEEEecCeeecCCC
Q 022471          229 DIILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       229 ~~~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                      .+++.+++++|++++++||+.+||+..
T Consensus       146 ~~~~~~~~~~~~~~~~lR~~~~~g~~~  172 (317)
T 3ajr_A          146 LLGQYYYEKFGLDVRSLRYPGIISYKA  172 (317)
T ss_dssp             HHHHHHHHHHCCEEEEEEECEEECSSS
T ss_pred             HHHHHHHHhcCCeEEEEecCcEeccCC
Confidence            999999888899999999999999863

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.96  E-value=6.8e-29  Score=215.89  Aligned_cols=174  Identities=16%  Similarity=0.149  Sum_probs=138.8

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|++|||||+||||++++++|+++|++|++++|+....++..+.+++..  ..++.++.+|++|.+++++++++     
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG--SGKVIGVQTDVSDRAQCDALAGRAVEEF   86 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTS--SSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC--CCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            34999999999999999999999999999999987655444444444321  25789999999999999988765     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHH----HHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVL----ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll----~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +++|+||||||+.....    ..++++..+++|+.++..++    +.|++.+.++||++||.....          .+.+
T Consensus        87 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----------~~~~  156 (262)
T 3pk0_A           87 GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPI----------TGYP  156 (262)
T ss_dssp             SCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTT----------BCCT
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcc----------CCCC
Confidence            68999999999865443    33444557889999976654    555556778999999976530          2234


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.||++.+.+++.++.|   +|+++++|+||.|+++.
T Consensus       157 ~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~  198 (262)
T 3pk0_A          157 GWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEG  198 (262)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred             CChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcc
Confidence            5789999999999999999988   79999999999999974

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.96  E-value=8.6e-29  Score=220.62  Aligned_cols=181  Identities=17%  Similarity=0.225  Sum_probs=149.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+||||||+|+||++++++|+++|++|++++|+.                       .+|++|.+++.+++++.++|+||
T Consensus         4 ~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~-----------------------~~D~~d~~~~~~~~~~~~~d~vi   60 (321)
T 1e6u_A            4 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-----------------------ELNLLDSRAVHDFFASERIDQVY   60 (321)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-----------------------TCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc-----------------------cCCccCHHHHHHHHHhcCCCEEE
Confidence            7899999999999999999999999999876531                       27999999999998544799999


Q ss_pred             EcccccCc-CCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCC----CCCCC-ChHHHHH
Q 022471          151 HFAAVAYV-GESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET----PQAPI-NPYGKAK  224 (296)
Q Consensus       151 ~~Ag~~~~-~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~----~~~~~-~~Y~~sK  224 (296)
                      |+||.... .....++.+.+++|+.++.++++++++.+.++|||+||.++|+.....+++|+.    +..|. ++|+.+|
T Consensus        61 h~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK  140 (321)
T 1e6u_A           61 LAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAK  140 (321)
T ss_dssp             ECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHH
T ss_pred             EcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHH
Confidence            99997542 123456778899999999999999999998999999999999877667788876    44453 5999999


Q ss_pred             HHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhC
Q 022471          225 KMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARG  283 (296)
Q Consensus       225 ~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  283 (296)
                      .++|.+++.++++.+++++++||++||||+......         ...+++.+++.+..
T Consensus       141 ~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~---------~~~~~~~~~~~~~~  190 (321)
T 1e6u_A          141 IAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPS---------NSHVIPALLRRFHE  190 (321)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTT---------CSSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCC---------CCccHHHHHHHHHH
Confidence            999999999988889999999999999998542110         01567777776653

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.96  E-value=2e-28  Score=215.42  Aligned_cols=175  Identities=17%  Similarity=0.118  Sum_probs=138.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC-------------CcchhhhhhhhhCCCCCceEEEEccCCCHHH
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR-------------GNIGAVKVLQELFPEPGRLQFIYADLGDAKA  136 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~  136 (296)
                      +|++|||||+||||++++++|+++|++|++++|+..             ..+.+.+..+.....+.++.++.+|++|.++
T Consensus        11 ~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   90 (286)
T 3uve_A           11 GKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDA   90 (286)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHH
Confidence            399999999999999999999999999999998632             1222333333333335688999999999999


Q ss_pred             HHHHhhc-----CCCcEEEEcccccCcCC-----CCcChHHHHHHHHHHHHHHHH----HHHHcC-CCEEEEEccccccc
Q 022471          137 VNKFFSE-----NAFDAVMHFAAVAYVGE-----STLDPLKYYHNITSNTLVVLE----SMARHG-VDTLIYSSTCATYG  201 (296)
Q Consensus       137 v~~~~~~-----~~~D~vi~~Ag~~~~~~-----~~~~~~~~~~~n~~~t~~ll~----~~~~~~-~~riV~~SS~~~~g  201 (296)
                      +++++++     +++|+||||||+.....     ..++++..+++|+.++..+++    .|++.+ .++||++||...+ 
T Consensus        91 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-  169 (286)
T 3uve_A           91 LKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGL-  169 (286)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT-
T ss_pred             HHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhc-
Confidence            9988865     68999999999865432     344556688999999666554    455544 5799999998876 


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          202 EPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       202 ~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                                .+.++...|+.||++.+.+++.++.|   +||++++|+||.|.++..
T Consensus       170 ----------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~  216 (286)
T 3uve_A          170 ----------KAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPML  216 (286)
T ss_dssp             ----------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTT
T ss_pred             ----------cCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcc
Confidence                      33445789999999999999999988   789999999999999863

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.96  E-value=1e-28  Score=217.37  Aligned_cols=171  Identities=22%  Similarity=0.247  Sum_probs=146.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+|||||||||||++++++|+++|++|++++|+                        .+|++|.+++.++++..++|+||
T Consensus        13 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~------------------------~~Dl~d~~~~~~~~~~~~~d~vi   68 (292)
T 1vl0_A           13 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQ------------------------DLDITNVLAVNKFFNEKKPNVVI   68 (292)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT------------------------TCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             ceEEEECCCChHHHHHHHHHHhCCCeEEeccCc------------------------cCCCCCHHHHHHHHHhcCCCEEE
Confidence            899999999999999999999999999999863                        37999999999998644799999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  230 (296)
                      ||||........+++.+.+++|+.++.++++++++.+. +||++||.++|+.....+++|+.+..|.++|+.+|.++|.+
T Consensus        69 h~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~  147 (292)
T 1vl0_A           69 NCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENF  147 (292)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             ECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHH
Confidence            99997654334467788999999999999999999887 99999999999887767899999888999999999999999


Q ss_pred             HHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          231 ILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       231 ~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      ++.++.    +++++||++|||| ..               .+++.+++.+..+.+
T Consensus       148 ~~~~~~----~~~~lR~~~v~G~-~~---------------~~~~~~~~~~~~~~~  183 (292)
T 1vl0_A          148 VKALNP----KYYIVRTAWLYGD-GN---------------NFVKTMINLGKTHDE  183 (292)
T ss_dssp             HHHHCS----SEEEEEECSEESS-SS---------------CHHHHHHHHHHHCSE
T ss_pred             HHhhCC----CeEEEeeeeeeCC-Cc---------------ChHHHHHHHHhcCCc
Confidence            998753    6999999999998 22               456666666665554

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.96  E-value=9.3e-29  Score=222.07  Aligned_cols=182  Identities=22%  Similarity=0.237  Sum_probs=139.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +|+||||||+||||++++++|+++|++|++++|+.....+... +.++.....+++++.+|++|.+++++++  .++|+|
T Consensus         5 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d~V   81 (337)
T 2c29_D            5 SETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKH-LLDLPKAETHLTLWKADLADEGSFDEAI--KGCTGV   81 (337)
T ss_dssp             -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHH-HHTSTTHHHHEEEEECCTTSTTTTHHHH--TTCSEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHH-HHhcccCCCeEEEEEcCCCCHHHHHHHH--cCCCEE
Confidence            4899999999999999999999999999999886543222211 1111100135788999999999999998  579999


Q ss_pred             EEcccccCcCCCCcChH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEEccccc-ccCCC-CCCCCCCCCC---------CC
Q 022471          150 MHFAAVAYVGESTLDPL-KYYHNITSNTLVVLESMARHG-VDTLIYSSTCAT-YGEPE-KMPITEETPQ---------AP  216 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~-~~~~~n~~~t~~ll~~~~~~~-~~riV~~SS~~~-~g~~~-~~~~~e~~~~---------~~  216 (296)
                      ||+|+...  ....++. +.+++|+.++.++++++++.+ .++|||+||.++ |+... ..+++|+.+.         .+
T Consensus        82 ih~A~~~~--~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  159 (337)
T 2c29_D           82 FHVATPMD--FESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMT  159 (337)
T ss_dssp             EECCCCCC--SSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCT
T ss_pred             EEeccccC--CCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCc
Confidence            99998652  2223333 578999999999999999887 799999999874 44322 2345555422         14


Q ss_pred             CChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          217 INPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                      .++|+.||.++|.++..+++++|++++++||++||||+..
T Consensus       160 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~  199 (337)
T 2c29_D          160 AWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIM  199 (337)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSC
T ss_pred             cchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCC
Confidence            4579999999999999988778999999999999999754

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.96  E-value=1.6e-28  Score=212.40  Aligned_cols=172  Identities=14%  Similarity=0.146  Sum_probs=135.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----CC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NA  145 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~  145 (296)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.++..   +.++.++.+|++|.+++++++++    ++
T Consensus         7 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~   83 (252)
T 3h7a_A            7 NATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA---GGRIVARSLDARNEDEVTAFLNAADAHAP   83 (252)
T ss_dssp             SCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT---TCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEECcCCCHHHHHHHHHHHHhhCC
Confidence            389999999999999999999999999999998776666666555543   46789999999999999988865    58


Q ss_pred             CcEEEEcccccCcCC----CCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +|+||||||+.....    ..++.+..+++|+.++..    +++.|++++.++||++||.+.+           .+.++.
T Consensus        84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~~~~  152 (252)
T 3h7a_A           84 LEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASL-----------RGGSGF  152 (252)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGT-----------CCCTTC
T ss_pred             ceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHc-----------CCCCCC
Confidence            999999999865433    334455678899999655    5566677777899999998775           334457


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcE-EEEecCeeecCCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAV-MILRYFNVIGSDP  255 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~-~~lrpg~v~Gp~~  255 (296)
                      ..|+.||++.+.+++.++.|   .|+++ ++++||.|.++..
T Consensus       153 ~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~  194 (252)
T 3h7a_A          153 AAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWV  194 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhh
Confidence            89999999999999999988   68999 8999999988753

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.96  E-value=1.2e-28  Score=214.58  Aligned_cols=171  Identities=15%  Similarity=0.101  Sum_probs=136.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.++..   +.++.++.+|++|.+++++++++     +
T Consensus         4 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   80 (264)
T 3tfo_A            4 DKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA---GGTALAQVLDVTDRHSVAAFAQAAVDTWG   80 (264)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT---TCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999998765555444444433   46788999999999999888765     6


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||+.....    ..++....+++|+.++..    +++.|++.+.++||++||.+.+           .+.++
T Consensus        81 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~-----------~~~~~  149 (264)
T 3tfo_A           81 RIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGAL-----------SVVPT  149 (264)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-----------CCCTT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHc-----------ccCCC
Confidence            8999999999865443    334455678899999654    5566666777899999998876           33445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc-CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN-SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~-~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.||++.+.+++.++.+ .||++++|+||.|.++.
T Consensus       150 ~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~  188 (264)
T 3tfo_A          150 AAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESEL  188 (264)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC----
T ss_pred             ChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcc
Confidence            778999999999999999988 49999999999998875

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.96  E-value=1.1e-28  Score=214.45  Aligned_cols=172  Identities=15%  Similarity=0.133  Sum_probs=136.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.+....  +.++.++.+|++|.+++++++++     +
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (263)
T 3ai3_A            7 GKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF--GVRVLEVAVDVATPEGVDAVVESVRSSFG   84 (263)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--CCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999986544333333333221  24688999999999999988864     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHH----HHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVL----ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll----~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||......    ..++++..+++|+.++..++    +.|++.+.++||++||.+.+.           +.++
T Consensus        85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  153 (263)
T 3ai3_A           85 GADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQ-----------PLWY  153 (263)
T ss_dssp             SCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCTT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcC-----------CCCC
Confidence            8999999999865433    33344567889999966654    445566778999999988773           2345


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.||++.+.+++.++.|   +|+++++|+||+|++|.
T Consensus       154 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  194 (263)
T 3ai3_A          154 EPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPD  194 (263)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcc
Confidence            678999999999999999987   79999999999999975

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.96  E-value=1.3e-28  Score=214.64  Aligned_cols=173  Identities=17%  Similarity=0.186  Sum_probs=138.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.+.+... +.++.++.+|++|.+++++++++     +
T Consensus        13 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   91 (267)
T 1iy8_A           13 DRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAP-DAEVLTTVADVSDEAQVEAYVTATTERFG   91 (267)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCT-TCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-CceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999999876444444444433221 35788999999999999988864     5


Q ss_pred             CCcEEEEcccccCc-CC----CCcChHHHHHHHHHHHH----HHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYV-GE----STLDPLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~-~~----~~~~~~~~~~~n~~~t~----~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||+... .+    ..+..+..+++|+.++.    .+++.|++.+.++||++||...+.           +.+
T Consensus        92 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  160 (267)
T 1iy8_A           92 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR-----------GIG  160 (267)
T ss_dssp             CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-----------BCS
T ss_pred             CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcc-----------CCC
Confidence            89999999997643 22    33445667889998855    567777777778999999987752           234


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.||++.+.+++.++.|   +|+++++|+||.|+++.
T Consensus       161 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  202 (267)
T 1iy8_A          161 NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPM  202 (267)
T ss_dssp             SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcc
Confidence            4678999999999999999887   69999999999999874

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.96  E-value=1e-28  Score=232.32  Aligned_cols=180  Identities=19%  Similarity=0.284  Sum_probs=149.1

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhC---CCeEEEEecCCCCcchhhhhhhhhCCC-------------CCceEEEEccCC
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKD---SYRVTIVDNLSRGNIGAVKVLQELFPE-------------PGRLQFIYADLG  132 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~  132 (296)
                      .+|+||||||||+||++++++|+++   |++|++++|+..... ..+.+.+....             ..++.++.+|++
T Consensus        72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~  150 (478)
T 4dqv_A           72 ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDED-ARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS  150 (478)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHH-HHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHH-HHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence            4599999999999999999999999   999999998765332 22222222211             257999999998


Q ss_pred             ------CHHHHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCC
Q 022471          133 ------DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKM  206 (296)
Q Consensus       133 ------d~~~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~  206 (296)
                            |.++++++++  ++|+||||||....    ..+.+.+++|+.++.++++++++.+.++|||+||.++|+.....
T Consensus       151 ~~~~gld~~~~~~~~~--~~D~Vih~Aa~~~~----~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~  224 (478)
T 4dqv_A          151 EPDLGLDQPMWRRLAE--TVDLIVDSAAMVNA----FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPS  224 (478)
T ss_dssp             SGGGGCCHHHHHHHHH--HCCEEEECCSSCSB----SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTT
T ss_pred             CcccCCCHHHHHHHHc--CCCEEEECccccCC----cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCC
Confidence                  6778888884  69999999998654    35567889999999999999999988999999999999887777


Q ss_pred             CCCCCCCCCCCCh-----------HHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCC
Q 022471          207 PITEETPQAPINP-----------YGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       207 ~~~e~~~~~~~~~-----------Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                      +++|+.+..+.++           |+.||.++|.+++.++.+.|++++++|||+|||+..
T Consensus       225 ~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~  284 (478)
T 4dqv_A          225 AFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTS  284 (478)
T ss_dssp             TCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSS
T ss_pred             CcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCc
Confidence            7888776544433           999999999999999887899999999999999864

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.96  E-value=2.6e-28  Score=214.11  Aligned_cols=176  Identities=15%  Similarity=0.098  Sum_probs=138.7

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC----------CcchhhhhhhhhCCCCCceEEEEccCCCHHHHH
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR----------GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVN  138 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~----------~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~  138 (296)
                      .+|++|||||+||||++++++|+++|++|++++|+..          +.+...+..+.....+.++.++.+|++|.++++
T Consensus        14 ~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   93 (280)
T 3pgx_A           14 QGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALR   93 (280)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence            3499999999999999999999999999999998421          222233333333333568899999999999999


Q ss_pred             HHhhc-----CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHH----HHHHcC-CCEEEEEcccccccCCC
Q 022471          139 KFFSE-----NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLE----SMARHG-VDTLIYSSTCATYGEPE  204 (296)
Q Consensus       139 ~~~~~-----~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~----~~~~~~-~~riV~~SS~~~~g~~~  204 (296)
                      +++++     +++|+||||||+.....    ..++.++.+++|+.++.++++    .|++.+ .++||++||...+    
T Consensus        94 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~----  169 (280)
T 3pgx_A           94 ELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGL----  169 (280)
T ss_dssp             HHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT----
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhc----
Confidence            88865     68999999999865443    334455678899999666554    455554 5799999998876    


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          205 KMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       205 ~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                             .+.++...|+.||++.+.+++.++.|   +||++++|+||.|++|..
T Consensus       170 -------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~  216 (280)
T 3pgx_A          170 -------KATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMI  216 (280)
T ss_dssp             -------SCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTC
T ss_pred             -------cCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCccc
Confidence                   33445789999999999999999988   799999999999999863

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.96  E-value=1.5e-28  Score=217.17  Aligned_cols=174  Identities=18%  Similarity=0.145  Sum_probs=140.1

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|+||||||+||||++++++|+++|++|++++|+....++..+.+++..  ..++.++.+|++|.+++++++++     
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  117 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG--AGNVIGVRLDVSDPGSCADAARTVVDAF  117 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSS--SSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC--CCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            34899999999999999999999999999999987665555554443321  15788999999999999888765     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +++|+||||||+.....    ..+++++.+++|+.++..+++++    ++.+.++||++||...+.          .+.+
T Consensus       118 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~----------~~~~  187 (293)
T 3rih_A          118 GALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPV----------TGYP  187 (293)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTT----------BBCT
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhcc----------CCCC
Confidence            68999999999865443    33445667889999977765554    677778999999976531          1234


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.||++.+.+++.++.|   +||++++|+||.|++|.
T Consensus       188 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  229 (293)
T 3rih_A          188 GWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEG  229 (293)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcc
Confidence            5789999999999999999988   69999999999999974

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.96  E-value=1.5e-28  Score=213.90  Aligned_cols=170  Identities=13%  Similarity=0.100  Sum_probs=138.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.+.+.   +.++.++.+|++|.+++++++++     +
T Consensus        11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (264)
T 3ucx_A           11 DKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT---GRRALSVGTDITDDAQVAHLVDETMKAYG   87 (264)
T ss_dssp             TCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            399999999999999999999999999999998665544444444432   46789999999999999988865     6


Q ss_pred             CCcEEEEcccccC-cCC----CCcChHHHHHHHHHHHHHHHHH----HHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAY-VGE----STLDPLKYYHNITSNTLVVLES----MARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~-~~~----~~~~~~~~~~~n~~~t~~ll~~----~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||... ..+    ..+++.+.+++|+.++.+++++    +++.+ ++||++||...+           .+.+
T Consensus        88 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~-----------~~~~  155 (264)
T 3ucx_A           88 RVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVR-----------HSQA  155 (264)
T ss_dssp             CCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGG-----------CCCT
T ss_pred             CCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhc-----------cCCC
Confidence            8999999998742 222    3345566788999997776554    45555 799999998876           3445


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.||++.+.+++.++.|   +||++++|+||.|++|.
T Consensus       156 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~  197 (264)
T 3ucx_A          156 KYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGT  197 (264)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccccc
Confidence            5789999999999999999988   79999999999999874

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.96  E-value=8.8e-29  Score=215.31  Aligned_cols=172  Identities=13%  Similarity=0.128  Sum_probs=136.2

Q ss_pred             CCCCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc--
Q 022471           66 HEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--  143 (296)
Q Consensus        66 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~--  143 (296)
                      ++.+ |++|||||++|||+++|+.|+++|++|++++|+...   +.+.++++   +.++.++++|++|.+++++++++  
T Consensus        26 rL~g-KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~---l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~   98 (273)
T 4fgs_A           26 RLNA-KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDV---LDAAIAEI---GGGAVGIQADSANLAELDRLYEKVK   98 (273)
T ss_dssp             TTTT-CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred             hhCC-CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHc---CCCeEEEEecCCCHHHHHHHHHHHH
Confidence            3445 999999999999999999999999999999976543   33344444   35788899999999999988876  


Q ss_pred             ---CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          144 ---NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       144 ---~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                         +++|+||||||.....+    .++++++.+++|+.++..+.+++.+.  ..++||++||...+           .+.
T Consensus        99 ~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~-----------~~~  167 (273)
T 4fgs_A           99 AEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGS-----------TGT  167 (273)
T ss_dssp             HHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGG-----------SCC
T ss_pred             HHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhc-----------cCC
Confidence               78999999999865544    33445567789999977766655432  23589999998765           334


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      +...+|++||.+...+++.++.|   +||+|++|.||.|..|.-
T Consensus       168 ~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~  211 (273)
T 4fgs_A          168 PAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGL  211 (273)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhH
Confidence            45789999999999999999988   789999999999988763

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.96  E-value=2.2e-28  Score=212.06  Aligned_cols=172  Identities=15%  Similarity=0.137  Sum_probs=137.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.+   ...+.++.++.+|++|.+++++++++     +
T Consensus         6 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (257)
T 3imf_A            6 EKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEI---EQFPGQILTVQMDVRNTDDIQKMIEQIDEKFG   82 (257)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CCSTTCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---HhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999998654444443333   33346789999999999999988865     6


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHH-----HHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESM-----ARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~-----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||.....+    ..++++..+++|+.++..+++++     ++.+.++||++||...+           .+.+
T Consensus        83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~~  151 (257)
T 3imf_A           83 RIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAW-----------DAGP  151 (257)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGG-----------SCCT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhc-----------cCCC
Confidence            8999999999755433    33445567889999977765554     33446899999998776           2344


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc----CCCcEEEEecCeeecCCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN----SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~----~gi~~~~lrpg~v~Gp~~  255 (296)
                      +...|+.||++.+.+++.++.|    +||++++|+||.|+++..
T Consensus       152 ~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~  195 (257)
T 3imf_A          152 GVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGG  195 (257)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCC
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcc
Confidence            5789999999999999999876    489999999999998853

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.96  E-value=1e-28  Score=216.36  Aligned_cols=179  Identities=15%  Similarity=0.090  Sum_probs=139.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC---------CcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHH
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR---------GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF  140 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~---------~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~  140 (296)
                      +|+||||||+||||++++++|+++|++|++++|+..         ..+...+..+.....+.++.++++|++|.++++++
T Consensus        13 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   92 (278)
T 3sx2_A           13 GKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAA   92 (278)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence            399999999999999999999999999999998632         12222222222222246789999999999999988


Q ss_pred             hhc-----CCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHH----HHHcC-CCEEEEEcccccccCCCCCCCCC
Q 022471          141 FSE-----NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLES----MARHG-VDTLIYSSTCATYGEPEKMPITE  210 (296)
Q Consensus       141 ~~~-----~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~----~~~~~-~~riV~~SS~~~~g~~~~~~~~e  210 (296)
                      +++     +++|+||||||+.......+++++.+++|+.++..++++    |++++ .++||++||.+.+....      
T Consensus        93 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------  166 (278)
T 3sx2_A           93 LQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVG------  166 (278)
T ss_dssp             HHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCC------
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCc------
Confidence            865     689999999998765555667778899999997765555    55554 57999999987653211      


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       211 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                       .+.++...|+.||++.+.+++.++.|   +||++++|+||.|++|..
T Consensus       167 -~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~  213 (278)
T 3sx2_A          167 -SADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMI  213 (278)
T ss_dssp             -CSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTT
T ss_pred             -cCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccc
Confidence             12234678999999999999999987   589999999999999864

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.96  E-value=7.3e-29  Score=216.77  Aligned_cols=172  Identities=14%  Similarity=0.150  Sum_probs=140.6

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|++|||||+||||++++++|+++|++|++++|+....++..+.++..   +.++.++.+|++|.+++++++++     
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV---GHDAEAVAFDVTSESEIIEAFARLDEQG  101 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT---TCCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            3499999999999999999999999999999987655544444444332   46788999999999999988865     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHH----HHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~l----l~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +++|+||||||+....+    ..++++..+++|+.++..+    ++.|++.+.++||++||...+           .+.+
T Consensus       102 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~-----------~~~~  170 (271)
T 4ibo_A          102 IDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSE-----------LARA  170 (271)
T ss_dssp             CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-----------SBCT
T ss_pred             CCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhC-----------CCCC
Confidence            58999999999865443    3445566789999997665    566666677899999997765           2344


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.||++.+.+++.++.|   +||++++|+||.|.++.
T Consensus       171 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  212 (271)
T 4ibo_A          171 TVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDM  212 (271)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcc
Confidence            5789999999999999999988   78999999999999874

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.96  E-value=3.3e-28  Score=215.56  Aligned_cols=175  Identities=14%  Similarity=0.115  Sum_probs=138.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC---------CcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHH
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR---------GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF  140 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~---------~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~  140 (296)
                      +|++|||||+||||++++++|+++|++|++++|+..         ..+.+.+..+++...+.++.++++|++|.++++++
T Consensus        28 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  107 (299)
T 3t7c_A           28 GKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAA  107 (299)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence            399999999999999999999999999999998632         12223333333322346789999999999999988


Q ss_pred             hhc-----CCCcEEEEcccccCcCC-----CCcChHHHHHHHHHHHHHHHHHH----HHcC-CCEEEEEcccccccCCCC
Q 022471          141 FSE-----NAFDAVMHFAAVAYVGE-----STLDPLKYYHNITSNTLVVLESM----ARHG-VDTLIYSSTCATYGEPEK  205 (296)
Q Consensus       141 ~~~-----~~~D~vi~~Ag~~~~~~-----~~~~~~~~~~~n~~~t~~ll~~~----~~~~-~~riV~~SS~~~~g~~~~  205 (296)
                      +++     +++|+||||||+.....     ..++++..+++|+.++..+++++    ++.+ .++||++||.+.+     
T Consensus       108 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~-----  182 (299)
T 3t7c_A          108 VDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGL-----  182 (299)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGT-----
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhc-----
Confidence            865     68999999999865432     34455668899999977665554    4443 5799999998876     


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          206 MPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       206 ~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                            .+.++...|+.||++.+.+++.++.|   .||++++|+||.|.+|..
T Consensus       183 ------~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  229 (299)
T 3t7c_A          183 ------RGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPML  229 (299)
T ss_dssp             ------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTT
T ss_pred             ------cCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccc
Confidence                  33445789999999999999999988   589999999999999863

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.96  E-value=2.1e-28  Score=212.45  Aligned_cols=171  Identities=12%  Similarity=0.026  Sum_probs=137.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc------
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------  143 (296)
                      +|+||||||+||||++++++|+++|++|++++|+....++..+.++..   +.++.++.+|++|.+++++++++      
T Consensus         9 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (260)
T 2ae2_A            9 GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK---GFKVEASVCDLSSRSERQELMNTVANHFH   85 (260)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999998654443333333322   35788999999999999988864      


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +++|+||||||+.....    ..+++...+++|+.++.++++++    ++.+.++||++||...+.           +.+
T Consensus        86 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  154 (260)
T 2ae2_A           86 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL-----------AVP  154 (260)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS-----------CCT
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc-----------CCC
Confidence            58999999999764432    33445667889999977765554    566778999999987762           334


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.||++.+.+++.++.|   +|+++++++||.++++.
T Consensus       155 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  196 (260)
T 2ae2_A          155 YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSL  196 (260)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHH
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcc
Confidence            5678999999999999999987   48999999999998864

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.96  E-value=1.7e-28  Score=213.73  Aligned_cols=173  Identities=15%  Similarity=0.109  Sum_probs=139.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.+....+ ..++.++.+|++|.+++++++++     +
T Consensus         8 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (265)
T 3lf2_A            8 EAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFP-GARLFASVCDVLDALQVRAFAEACERTLG   86 (265)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHST-TCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-CceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            48999999999999999999999999999999876555555555544322 24588999999999999888865     6


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||+.....    ..+++...+++|+.++..+++++    ++.+.++||++||...+           .+.++
T Consensus        87 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~~~  155 (265)
T 3lf2_A           87 CASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLAS-----------QPEPH  155 (265)
T ss_dssp             SCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGT-----------SCCTT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccC-----------CCCCC
Confidence            8999999999865433    33445567889999977665554    45566799999998776           33445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.||++.+.+++.++.|   +||++++|+||.|.+|.
T Consensus       156 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~  196 (265)
T 3lf2_A          156 MVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQ  196 (265)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCch
Confidence            789999999999999999988   58999999999998863

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.96  E-value=7.6e-29  Score=216.57  Aligned_cols=171  Identities=13%  Similarity=0.063  Sum_probs=138.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.++..   +.++.++.+|++|.+++++++++     +
T Consensus        28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (270)
T 3ftp_A           28 KQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA---GLEGRGAVLNVNDATAVDALVESTLKEFG  104 (270)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH---TCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999998665544444444443   35788999999999999988865     6


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHH----HHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLES----MARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~----~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||+.....    ..++++..+++|+.++..++++    |++.+.++||++||.+.+.           +.++
T Consensus       105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  173 (270)
T 3ftp_A          105 ALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSA-----------GNPG  173 (270)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-----------CCTT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC-----------CCCC
Confidence            8999999999865443    3344566788999997765554    4556678999999987762           3345


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.||++.+.+++.++.|   .|+++++|+||.|.++.
T Consensus       174 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  214 (270)
T 3ftp_A          174 QVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDM  214 (270)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcc
Confidence            789999999999999999988   68999999999998863

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.96  E-value=1.3e-28  Score=215.95  Aligned_cols=169  Identities=15%  Similarity=0.073  Sum_probs=136.8

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|+||||||+||||++++++|+++|++|++++|+....++   ..+++   +.++.++.+|++|.+++++++++     
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~---~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADA---AATKI---GCGAAACRVDVSDEQQIIAMVDACVAAF  101 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHH---HHHHH---CSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---HHHHc---CCcceEEEecCCCHHHHHHHHHHHHHHc
Confidence            34999999999999999999999999999999976543332   22333   35788999999999999888765     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +++|+||||||+.....    ..++.++.+++|+.++..    +++.|++.+.++||++||...+           .+.+
T Consensus       102 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~-----------~~~~  170 (277)
T 3gvc_A          102 GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQ-----------VAVG  170 (277)
T ss_dssp             SSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGT-----------SCCT
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhc-----------cCCC
Confidence            68999999999865433    344456678899999655    4455566777899999998775           3344


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.||++.+.+++.++.|   +||++++|+||.|++|.
T Consensus       171 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  212 (277)
T 3gvc_A          171 GTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPM  212 (277)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCch
Confidence            5789999999999999999987   79999999999999874

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.96  E-value=1.2e-28  Score=213.98  Aligned_cols=171  Identities=15%  Similarity=0.172  Sum_probs=136.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEE-ecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIV-DNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      +|+||||||+||||++++++|+++|++|+++ +|+....++..+.++   ..+.++.++.+|++|.+++++++++     
T Consensus         4 ~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (258)
T 3oid_A            4 NKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIE---KLGVKVLVVKANVGQPAKIKEMFQQIDETF   80 (258)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH---TTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH---hcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3899999999999999999999999999987 554433333333333   2346789999999999999988865     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHH----HHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVL----ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll----~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +++|+||||||.....+    ..++.+..+++|+.++..++    +.|++.+.++||++||.+.+           .+.+
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~-----------~~~~  149 (258)
T 3oid_A           81 GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSI-----------RYLE  149 (258)
T ss_dssp             SCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGT-----------SBCT
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhC-----------CCCC
Confidence            68999999999755443    33344557889999976655    44566677899999998776           3345


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.||++.+.+++.++.|   +|+++++++||.|.++.
T Consensus       150 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~  191 (258)
T 3oid_A          150 NYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDA  191 (258)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGG
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChh
Confidence            5789999999999999999988   58999999999999875

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.96  E-value=1.6e-28  Score=213.24  Aligned_cols=169  Identities=14%  Similarity=0.137  Sum_probs=136.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+||||||+||||++++++|+++|++|++++|+....++..+.+.      .++.++.+|++|.+++++++++     +
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~~~~~g   80 (260)
T 1nff_A            7 GKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA------DAARYVHLDVTQPAQWKAAVDTAVTAFG   80 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG------GGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh------cCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999986533332222221      2478899999999999988864     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHH----HHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t----~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||......    ..+..++.+++|+.++    +.+++.|++.+.++||++||.+.+.           +.++
T Consensus        81 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  149 (260)
T 1nff_A           81 GLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLA-----------GTVA  149 (260)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCTT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcC-----------CCCC
Confidence            8999999999865432    3334556788999997    5567777777778999999988762           2334


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      ...|+.||++.+.+++.++.+   +|+++++|+||.|+++..
T Consensus       150 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  191 (260)
T 1nff_A          150 CHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMT  191 (260)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGG
T ss_pred             chhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCcc
Confidence            678999999999999999987   699999999999999863

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.96  E-value=2e-28  Score=214.92  Aligned_cols=172  Identities=13%  Similarity=0.032  Sum_probs=138.4

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|++|||||+||||++++++|+++|++|++++|+....++..+.++.   .+.++.++.+|++|.+++++++++     
T Consensus        23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (279)
T 3sju_A           23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRA---AGHDVDGSSCDVTSTDEVHAAVAAAVERF   99 (279)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT---TTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            348999999999999999999999999999999865544444444433   346789999999999999888865     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHH------HHcCCCEEEEEcccccccCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESM------ARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~------~~~~~~riV~~SS~~~~g~~~~~~~~e~~~  213 (296)
                      +++|+||||||......    ..++.++.+++|+.++..+++++      ++.+.++||++||.+.+           .+
T Consensus       100 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~-----------~~  168 (279)
T 3sju_A          100 GPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGK-----------QG  168 (279)
T ss_dssp             CSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGT-----------SC
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhc-----------cC
Confidence            68999999999865443    23344557789999987777665      44567899999998876           33


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       214 ~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      .++...|+.||++.+.+++.++.|   +|+++++|+||.|.++.
T Consensus       169 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~  212 (279)
T 3sju_A          169 VMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPM  212 (279)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHH
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchH
Confidence            445789999999999999999988   68999999999998864

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.96  E-value=2.1e-28  Score=213.38  Aligned_cols=172  Identities=19%  Similarity=0.217  Sum_probs=140.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-CCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~  148 (296)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.+....+ +..+.++.+|++|.+++++++++ +++|+
T Consensus        10 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~g~id~   88 (267)
T 3t4x_A           10 GKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYP-DAILQPVVADLGTEQGCQDVIEKYPKVDI   88 (267)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCT-TCEEEEEECCTTSHHHHHHHHHHCCCCSE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC-CceEEEEecCCCCHHHHHHHHHhcCCCCE
Confidence            38999999999999999999999999999999876555555555554432 25678899999999999998876 68999


Q ss_pred             EEEcccccCcCCC----CcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChH
Q 022471          149 VMHFAAVAYVGES----TLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (296)
Q Consensus       149 vi~~Ag~~~~~~~----~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (296)
                      ||||||+......    .++.++.+++|+.+    ++.+++.|++.+.++||++||...+           .+.++...|
T Consensus        89 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~~~~~~Y  157 (267)
T 3t4x_A           89 LINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAI-----------MPSQEMAHY  157 (267)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGT-----------SCCTTCHHH
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhc-----------cCCCcchHH
Confidence            9999998655433    33344568899999    4556777777777899999998876           344567899


Q ss_pred             HHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecC
Q 022471          221 GKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGS  253 (296)
Q Consensus       221 ~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp  253 (296)
                      +.||++.+.+++.++.|   +||++++++||.|.++
T Consensus       158 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~  193 (267)
T 3t4x_A          158 SATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTE  193 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCc
Confidence            99999999999999987   5799999999999886

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.96  E-value=3.4e-28  Score=213.11  Aligned_cols=174  Identities=16%  Similarity=0.118  Sum_probs=137.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC----------CcchhhhhhhhhCCCCCceEEEEccCCCHHHHHH
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR----------GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNK  139 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~----------~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~  139 (296)
                      +|++|||||+||||++++++|+++|++|++++|+.+          +.+...+..+.....+.++.++.+|++|.+++++
T Consensus        11 ~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (277)
T 3tsc_A           11 GRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRK   90 (277)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence            399999999999999999999999999999998422          2233333333332234678999999999999998


Q ss_pred             Hhhc-----CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHH----HHHHcC-CCEEEEEcccccccCCCC
Q 022471          140 FFSE-----NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLE----SMARHG-VDTLIYSSTCATYGEPEK  205 (296)
Q Consensus       140 ~~~~-----~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~----~~~~~~-~~riV~~SS~~~~g~~~~  205 (296)
                      ++++     +++|+||||||+.....    ..++.+..+++|+.++..+++    .|++.+ .++||++||.+.+     
T Consensus        91 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~-----  165 (277)
T 3tsc_A           91 VVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGM-----  165 (277)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT-----
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhC-----
Confidence            8875     78999999999865543    344556678999999666554    466655 5799999998876     


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          206 MPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       206 ~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                            .+.++...|+.||++.+.+++.++.|   +||++++|+||.|.++.
T Consensus       166 ------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~  211 (277)
T 3tsc_A          166 ------KMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPM  211 (277)
T ss_dssp             ------SCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGG
T ss_pred             ------CCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCc
Confidence                  23445778999999999999999988   58999999999999875

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.96  E-value=3.9e-28  Score=209.25  Aligned_cols=170  Identities=15%  Similarity=0.119  Sum_probs=135.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.++..   +.++.++.+|++|.+++++++++     +
T Consensus         7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   83 (247)
T 2jah_A            7 GKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA---GAKVHVLELDVADRQGVDAAVASTVEALG   83 (247)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999998654444444444332   35788999999999999988864     6


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHH----HHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVL----ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll----~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||+.....    ..++.+..+++|+.++..++    +.|++.+ ++||++||.+.+.           +.++
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~-----------~~~~  151 (247)
T 2jah_A           84 GLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRV-----------NVRN  151 (247)
T ss_dssp             CCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTC-----------CCTT
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcC-----------CCCC
Confidence            8999999999864433    23344567889999966655    4455566 8999999987762           3345


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.||++.+.+++.++.|   +|+++++|+||.|.++.
T Consensus       152 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  192 (247)
T 2jah_A          152 AAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTEL  192 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSG
T ss_pred             CcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcc
Confidence            779999999999999999887   69999999999998875

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.96  E-value=2.5e-28  Score=211.57  Aligned_cols=169  Identities=12%  Similarity=0.066  Sum_probs=131.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.+      +.++.++.+|++|.+++++++++     +
T Consensus         7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (257)
T 3tpc_A            7 SRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL------GAAVRFRNADVTNEADATAALAFAKQEFG   80 (257)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------------CEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh------CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999998776554433332      35788999999999999988865     6


Q ss_pred             CCcEEEEcccccCcCC--------CCcChHHHHHHHHHHHHHHHHHHHHc----------CCCEEEEEcccccccCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE--------STLDPLKYYHNITSNTLVVLESMARH----------GVDTLIYSSTCATYGEPEKM  206 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~--------~~~~~~~~~~~n~~~t~~ll~~~~~~----------~~~riV~~SS~~~~g~~~~~  206 (296)
                      ++|+||||||......        ..+++++.+++|+.++..+++++.+.          +.++||++||.+.+.     
T Consensus        81 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~-----  155 (257)
T 3tpc_A           81 HVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFD-----  155 (257)
T ss_dssp             CCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH-----
T ss_pred             CCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhcc-----
Confidence            8999999999864322        23455668899999987766666542          457899999988762     


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          207 PITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       207 ~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                            +.++...|+.||++.+.+++.++.|   +|+++++++||.|.++..
T Consensus       156 ------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~  201 (257)
T 3tpc_A          156 ------GQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMM  201 (257)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC--
T ss_pred             ------CCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhh
Confidence                  3345789999999999999999988   799999999999999853

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.96  E-value=4e-28  Score=236.77  Aligned_cols=202  Identities=20%  Similarity=0.278  Sum_probs=159.9

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHH-HHHHhhcCCC
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKA-VNKFFSENAF  146 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-v~~~~~~~~~  146 (296)
                      .+|+||||||+||||++++++|+++ |++|++++|+........        ...++.++.+|++|.++ ++++++  ++
T Consensus       314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~--------~~~~v~~v~~Dl~d~~~~~~~~~~--~~  383 (660)
T 1z7e_A          314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDISIHSEWIEYHVK--KC  383 (660)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT--------TCTTEEEEECCTTTCHHHHHHHHH--HC
T ss_pred             cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc--------cCCceEEEECCCCCcHHHHHHhhc--CC
Confidence            4589999999999999999999998 899999998764432211        12578899999999765 777774  69


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCC-------CCCCh
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ-------APINP  219 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~-------~~~~~  219 (296)
                      |+||||||.........++.+.+++|+.++.++++++.+.+ ++||++||.++|+.....+++|+.+.       .|.+.
T Consensus       384 D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~  462 (660)
T 1z7e_A          384 DVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWI  462 (660)
T ss_dssp             SEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHH
T ss_pred             CEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCC
Confidence            99999999765433445677899999999999999999988 89999999999988766677777642       45668


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          220 YGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       220 Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      |+.||.++|.+++.++.+.|++++++||++||||+........     .+...+++.++..+..+.+
T Consensus       463 Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~  524 (660)
T 1z7e_A          463 YSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAAR-----IGSSRAITQLILNLVEGSP  524 (660)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHT-----TTCSCHHHHHHHHHHHTCC
T ss_pred             cHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCcccccccc-----ccccchHHHHHHHHHcCCC
Confidence            9999999999999998888999999999999999853100000     0002567777777777766

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.96  E-value=2.7e-28  Score=214.51  Aligned_cols=174  Identities=15%  Similarity=0.126  Sum_probs=138.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.+   ...+.++.++++|++|.+++++++++     +
T Consensus        28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l---~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (283)
T 3v8b_A           28 SPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEI---VGAGGQAIALEADVSDELQMRNAVRDLVLKFG  104 (283)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---TTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---HhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            489999999999999999999999999999998654444333333   33356789999999999999988875     6


Q ss_pred             CCcEEEEcccccCc-CC----CCcChHHHHHHHHHHHHHHHHH----HHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYV-GE----STLDPLKYYHNITSNTLVVLES----MARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~-~~----~~~~~~~~~~~n~~~t~~ll~~----~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||+... .+    ..+++++.+++|+.++..++++    |++.+.++||++||.+.+..         .+.+
T Consensus       105 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~---------~~~~  175 (283)
T 3v8b_A          105 HLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRT---------FTTP  175 (283)
T ss_dssp             CCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTB---------CCST
T ss_pred             CCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccC---------CCCC
Confidence            89999999998543 22    3344556789999997665544    47777789999999776521         1334


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      +...|+.||++.+.+++.++.|   +||++++|+||.|.++..
T Consensus       176 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  218 (283)
T 3v8b_A          176 GATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNIS  218 (283)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTT
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcc
Confidence            5789999999999999999988   689999999999998864

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.96  E-value=8.6e-29  Score=217.65  Aligned_cols=187  Identities=16%  Similarity=0.114  Sum_probs=142.8

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC---------cchhhhhhhhhCCCCCceEEEEccCCCHHHHHH
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG---------NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNK  139 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~---------~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~  139 (296)
                      .+|+||||||+||||++++++|+++|++|++++|+...         .+...+...+....+.++.++.+|++|.+++++
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   88 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR   88 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence            34999999999999999999999999999999986321         111112111222224678999999999999988


Q ss_pred             Hhhc-----CCCcEEEEcccccCcC--CCCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCC
Q 022471          140 FFSE-----NAFDAVMHFAAVAYVG--ESTLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITE  210 (296)
Q Consensus       140 ~~~~-----~~~D~vi~~Ag~~~~~--~~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e  210 (296)
                      ++++     +++|+||||||+....  ...+.++..+++|+.++.++++++.+.  +.++||++||.+.+......+..+
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  168 (287)
T 3pxx_A           89 ELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAG  168 (287)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC---
T ss_pred             HHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccccccccc
Confidence            8865     6899999999986543  345566778999999999999888764  346999999987764433333333


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       211 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      ..+.++...|+.||++.+.+++.++.+   +||++++|+||.|.++..
T Consensus       169 ~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~  216 (287)
T 3pxx_A          169 GPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDML  216 (287)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTT
T ss_pred             ccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccc
Confidence            334445678999999999999999988   499999999999999863

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.96  E-value=4e-28  Score=210.58  Aligned_cols=168  Identities=17%  Similarity=0.129  Sum_probs=135.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||++++++|+++|++|++++|+....++   ..+++   +.++.++.+|++|.+++++++++     +
T Consensus         8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   81 (259)
T 4e6p_A            8 GKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQ---AAAEI---GPAAYAVQMDVTRQDSIDAAIAATVEHAG   81 (259)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---HHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---HHHHh---CCCceEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999976443332   22333   24678999999999999988865     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHH----HHcC-CCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESM----ARHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~----~~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||+....+    ..+++++.+++|+.++.++++++    ++.+ .++||++||.+.+           .+.+
T Consensus        82 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~~  150 (259)
T 4e6p_A           82 GLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGR-----------RGEA  150 (259)
T ss_dssp             SCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT-----------SCCT
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhc-----------cCCC
Confidence            8999999999865443    33445567789999977766554    4444 5699999998876           2344


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.||++.+.+++.++.|   +|+++++|+||.|++|.
T Consensus       151 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~  192 (259)
T 4e6p_A          151 LVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEH  192 (259)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTT
T ss_pred             CChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccch
Confidence            5788999999999999999987   59999999999999985

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.96  E-value=1.7e-28  Score=211.96  Aligned_cols=174  Identities=16%  Similarity=0.065  Sum_probs=136.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.+.+......++.++.+|++|.+++++++++     +
T Consensus         7 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (250)
T 3nyw_A            7 KGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYG   86 (250)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcC
Confidence            38999999999999999999999999999999876666655555555433336788999999999999988865     6


Q ss_pred             CCcEEEEcccccCcCCC---CcChHHHHHHHHHHHHHH----HHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGES---TLDPLKYYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~---~~~~~~~~~~n~~~t~~l----l~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      ++|+||||||+......   .++.++.+++|+.++..+    ++.|++.+.++||++||.+.+           .+..+.
T Consensus        87 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~~~~  155 (250)
T 3nyw_A           87 AVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAK-----------YGFADG  155 (250)
T ss_dssp             CEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC------------------CCT
T ss_pred             CCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhc-----------CCCCCC
Confidence            89999999998654333   233456788999996654    455566777899999997765           223347


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..|+.||++.+.+++.++.|   .|+++++|+||.|.++.
T Consensus       156 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~  195 (250)
T 3nyw_A          156 GIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDM  195 (250)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHH
T ss_pred             cchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCch
Confidence            89999999999999999988   58999999999998764

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.96  E-value=1.8e-28  Score=211.47  Aligned_cols=169  Identities=12%  Similarity=0.061  Sum_probs=136.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.+.      .+..++++|++|.+++++++++     +
T Consensus         9 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   82 (248)
T 3op4_A            9 GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG------DNGKGMALNVTNPESIEAVLKAITDEFG   82 (248)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG------GGEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc------ccceEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            4899999999999999999999999999999986544333333221      3567899999999999988865     6


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHH----HHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLE----SMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~----~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||+.....    ..+++++.+++|+.++..+++    .|++.+.++||++||.+.+           .+.++
T Consensus        83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~-----------~~~~~  151 (248)
T 3op4_A           83 GVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGT-----------MGNAG  151 (248)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH-----------HCCTT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhc-----------CCCCC
Confidence            8999999999865443    344556678899999666554    4555677899999998766           23445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      ...|+.||++.+.+++.++.|   +|+++++|+||.|.++..
T Consensus       152 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~  193 (248)
T 3op4_A          152 QANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMT  193 (248)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTT
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchh
Confidence            789999999999999999987   689999999999998753

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.96  E-value=2.2e-28  Score=213.48  Aligned_cols=173  Identities=16%  Similarity=0.097  Sum_probs=137.4

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC-CcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR-GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (296)
                      .+|+||||||+||||++++++|+++|++|++++|+.. ..++..+.++.   .+.++.++.+|++|.+++++++++    
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~d~~~v~~~~~~~~~~  103 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAA---AGGEAFAVKADVSQESEVEALFAAVIER  103 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH---TTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHh---cCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3489999999999999999999999999999987432 22223333332   246789999999999999988865    


Q ss_pred             -CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHH----HHHHcCCCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          144 -NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLE----SMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       144 -~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~----~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                       +++|+||||||+.....    ..++++..+++|+.++..+++    .|++.+.++||++||.+.+.           +.
T Consensus       104 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~  172 (269)
T 4dmm_A          104 WGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEM-----------GN  172 (269)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHH-----------CC
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcC-----------CC
Confidence             68999999999865433    344556678899999666554    45666778999999987652           23


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      ++...|+.||++.+.+++.++.|   +|+++++|+||.|.++..
T Consensus       173 ~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~  216 (269)
T 4dmm_A          173 PGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMT  216 (269)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCS
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccc
Confidence            45779999999999999999987   689999999999998853

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.96  E-value=6.7e-28  Score=210.90  Aligned_cols=170  Identities=16%  Similarity=0.156  Sum_probs=136.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----CC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NA  145 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~  145 (296)
                      +|++|||||+||||++++++|+++|++|++++|. ...++..   +++...+.++.++.+|++|.++++++.+.    ++
T Consensus        31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~---~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~  106 (273)
T 3uf0_A           31 GRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVA---DEIADGGGSAEAVVADLADLEGAANVAEELAATRR  106 (273)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHH---HHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHH---HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCC
Confidence            4999999999999999999999999999999964 2222222   33323346789999999999998887543    68


Q ss_pred             CcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHH----HHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLE----SMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~----~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +|+||||||+....+    ..++++..+++|+.++..+++    .|++.+.++||++||...+           .+.++.
T Consensus       107 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~-----------~~~~~~  175 (273)
T 3uf0_A          107 VDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSF-----------QGGRNV  175 (273)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-----------SCCSSC
T ss_pred             CcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhc-----------CCCCCC
Confidence            999999999865543    334456678899999766554    5566777899999998876           334457


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..|+.||++.+.+++.++.|   +||++++|+||.|++|.
T Consensus       176 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  215 (273)
T 3uf0_A          176 AAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTAN  215 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCc
Confidence            89999999999999999988   79999999999999875

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.96  E-value=1.3e-28  Score=219.07  Aligned_cols=163  Identities=23%  Similarity=0.270  Sum_probs=114.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+|||||||||||++++++|+++|++|++++|+...               .+  ++.+|++|.+++.++++..++|+||
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---------------~~--~~~~Dl~d~~~~~~~~~~~~~d~vi   65 (315)
T 2ydy_A            3 RRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR---------------PK--FEQVNLLDSNAVHHIIHDFQPHVIV   65 (315)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-----------------------------------CHHHHHHHCCSEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC---------------CC--eEEecCCCHHHHHHHHHhhCCCEEE
Confidence            789999999999999999999999999999875321               11  6789999999999988644699999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  230 (296)
                      ||||........+++.+.+++|+.++.++++++.+.+. +|||+||.++|+. ...+++|+.+..|.+.|+.+|.++|.+
T Consensus        66 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~-~~~~~~E~~~~~~~~~Y~~sK~~~e~~  143 (315)
T 2ydy_A           66 HCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKLDGEKA  143 (315)
T ss_dssp             ECC-------------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCS-SSCSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             ECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCC-CCCCCCCCCCCCCcCHHHHHHHHHHHH
Confidence            99997655445567788899999999999999999886 9999999999987 556788988888899999999999999


Q ss_pred             HHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          231 ILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       231 ~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                      ++.+    +.+++++||+.||||.+.
T Consensus       144 ~~~~----~~~~~~lR~~~v~G~~~~  165 (315)
T 2ydy_A          144 VLEN----NLGAAVLRIPILYGEVEK  165 (315)
T ss_dssp             HHHH----CTTCEEEEECSEECSCSS
T ss_pred             HHHh----CCCeEEEeeeeeeCCCCc
Confidence            9986    456799999999999754

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.96  E-value=2.1e-28  Score=211.80  Aligned_cols=168  Identities=17%  Similarity=0.126  Sum_probs=136.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+||||||+||||++++++|+++|++|++++|+....++   ..+++   +.++.++.+|++|.+++++++++     +
T Consensus         5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (254)
T 1hdc_A            5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAA---TAREL---GDAARYQHLDVTIEEDWQRVVAYAREEFG   78 (254)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---HHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---HHHHh---CCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999986433222   22222   24688899999999999888864     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHH----HHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~----~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||.....+    ..++++..+++|+.++.    .+++.|++.+.++||++||.+.+.           +.++
T Consensus        79 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  147 (254)
T 1hdc_A           79 SVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM-----------GLAL  147 (254)
T ss_dssp             CCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCTT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhcc-----------CCCC
Confidence            8999999999765432    33445667889999965    677888887778999999987762           2345


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.||++.+.+++.++.|   +|+++++|+||.|+++.
T Consensus       148 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  188 (254)
T 1hdc_A          148 TSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM  188 (254)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCcc
Confidence            779999999999999999987   68999999999999874

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.96  E-value=2.8e-28  Score=214.16  Aligned_cols=173  Identities=14%  Similarity=0.107  Sum_probs=135.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC-CCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      +|++|||||+||||++++++|+++|++|++++|+. ...+...+.+...  .+.++.++.+|++|.+++++++++     
T Consensus        25 ~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  102 (281)
T 3v2h_A           25 TKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGL--SSGTVLHHPADMTKPSEIADMMAMVADRF  102 (281)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTT--CSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhc--cCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence            38999999999999999999999999999998743 2222233333222  135788999999999999988865     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHH----HHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLES----MARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~----~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +++|+||||||+.....    ..+.++..+++|+.++..++++    |++.+.++||++||.+.+           .+.+
T Consensus       103 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~~  171 (281)
T 3v2h_A          103 GGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGL-----------VASP  171 (281)
T ss_dssp             SSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-----------SCCT
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccc-----------cCCC
Confidence            68999999999865543    3344556788999997665554    566777899999998776           2344


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      +...|+.||++.+.+++.++.|   .|+++++|+||.|++|..
T Consensus       172 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~  214 (281)
T 3v2h_A          172 FKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLV  214 (281)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC---
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcch
Confidence            5779999999999999999987   689999999999999863

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.96  E-value=4.1e-28  Score=212.20  Aligned_cols=172  Identities=15%  Similarity=0.100  Sum_probs=134.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc------
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------  143 (296)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.++..   +.++.++.+|++|.+++++++++      
T Consensus        21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   97 (273)
T 1ae1_A           21 GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK---GLNVEGSVCDLLSRTERDKLMQTVAHVFD   97 (273)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999998654433333333322   35788999999999999988864      


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHH----HHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLES----MARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~----~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +++|+||||||.....+    ..++.+..+++|+.++..++++    |++.+.++||++||.+.+.           +.+
T Consensus        98 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~  166 (273)
T 1ae1_A           98 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFS-----------ALP  166 (273)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTS-----------CCT
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcC-----------CCC
Confidence            58999999999865433    2334555778999997665554    4566678999999988773           334


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      +...|+.||++.+.+++.++.|   +|+++++|+||.|++|..
T Consensus       167 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  209 (273)
T 1ae1_A          167 SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLV  209 (273)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchh
Confidence            5679999999999999999987   599999999999999863

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.96  E-value=1.9e-28  Score=215.19  Aligned_cols=173  Identities=16%  Similarity=0.143  Sum_probs=138.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+||||||+||||++++++|+++|++|++++|+....++..+.+   ...+.++.++.+|++|.+++++++++     +
T Consensus         8 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   84 (280)
T 3tox_A            8 GKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEI---AGGGGEAAALAGDVGDEALHEALVELAVRRFG   84 (280)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHH---TTTTCCEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH---HhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            489999999999999999999999999999987654444333333   33346789999999999999988865     6


Q ss_pred             CCcEEEEcccccCc-C----CCCcChHHHHHHHHHHHHHHH----HHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYV-G----ESTLDPLKYYHNITSNTLVVL----ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~-~----~~~~~~~~~~~~n~~~t~~ll----~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||+... .    ...++.+..+++|+.++..++    +.|++.+.++||++||...+.          .+.+
T Consensus        85 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------~~~~  154 (280)
T 3tox_A           85 GLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHT----------AGFA  154 (280)
T ss_dssp             CCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTT----------BCCT
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCc----------CCCC
Confidence            89999999997532 2    234455678899999966654    455666778999999987651          1234


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      +...|+.||++.+.+++.++.|   .||++++|+||.|.+|..
T Consensus       155 ~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~  197 (280)
T 3tox_A          155 GVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPAN  197 (280)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTS
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchh
Confidence            5788999999999999999988   699999999999999864

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.96  E-value=5.4e-28  Score=208.61  Aligned_cols=169  Identities=16%  Similarity=0.164  Sum_probs=132.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+||||||+||||++++++|+++|++|++++|+..  +...+.+++.   +.++.++++|++|.+++++++++     ++
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (249)
T 2ew8_A            8 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIRNL---GRRVLTVKCDVSQPGDVEAFGKQVISTFGR   82 (249)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCch--hHHHHHHHhc---CCcEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            89999999999999999999999999999998651  2222233322   35788999999999999888764     68


Q ss_pred             CcEEEEcccccCcCC----CCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +|+||||||.....+    ..++.++.+++|+.++.+    +++.|++.+.++||++||...+.           +.++.
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~  151 (249)
T 2ew8_A           83 CDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWL-----------KIEAY  151 (249)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS-----------CCSSC
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcc-----------CCCCc
Confidence            999999999865432    334455678899999555    55557777778999999988762           33457


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      ..|+.||++.+.+++.++.|   .|+++++|+||.|.++..
T Consensus       152 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  192 (249)
T 2ew8_A          152 THYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATT  192 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-----
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccc
Confidence            79999999999999999987   599999999999998753

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.96  E-value=2.3e-28  Score=213.05  Aligned_cols=170  Identities=16%  Similarity=0.104  Sum_probs=132.3

Q ss_pred             CCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----
Q 022471           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (296)
Q Consensus        68 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (296)
                      ..+|+||||||+||||++++++|+++|++|++++|+....+   +..++.   +.++.++.+|++|.+++++++++    
T Consensus        25 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~---~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~   98 (266)
T 3grp_A           25 LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLK---EIAADL---GKDVFVFSANLSDRKSIKQLAEVAERE   98 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---HHHHHH---CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---HHHHHh---CCceEEEEeecCCHHHHHHHHHHHHHH
Confidence            34499999999999999999999999999999997543332   222333   35789999999999999988865    


Q ss_pred             -CCCcEEEEcccccCcCC----CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          144 -NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       144 -~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                       +++|+||||||+.....    ..+++++.+++|+.+    ++.+++.|++.+.++||++||...+           .+.
T Consensus        99 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~-----------~~~  167 (266)
T 3grp_A           99 MEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGV-----------VGN  167 (266)
T ss_dssp             HTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-----------------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHc-----------CCC
Confidence             68999999999865433    233455678899999    6667777777777899999997765           233


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ++...|+.||++.+.+++.++.|   +|+++++|+||.|.++.
T Consensus       168 ~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~  210 (266)
T 3grp_A          168 PGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAM  210 (266)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCch
Confidence            45678999999999999999987   68999999999999874

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.96  E-value=4.6e-28  Score=211.22  Aligned_cols=173  Identities=15%  Similarity=0.094  Sum_probs=135.9

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|++|||||+||||++++++|+++|++|++++|+....++..+.+.+..  +.++.++.+|++|.+++++++++     
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   97 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY--GVETMAFRCDVSNYEEVKKLLEAVKEKF   97 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--CCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            34999999999999999999999999999999986544433333331111  35688899999999999888864     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHH----HHHHcCCCEEEEEcccc-cccCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLE----SMARHGVDTLIYSSTCA-TYGEPEKMPITEETPQ  214 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~----~~~~~~~~riV~~SS~~-~~g~~~~~~~~e~~~~  214 (296)
                      +++|+||||||+.....    ..+..+..+++|+.++..+++    .|++.+.++||++||.+ .+           .+.
T Consensus        98 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~  166 (267)
T 1vl8_A           98 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEE-----------VTM  166 (267)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTC-----------CCS
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhc-----------cCC
Confidence            68999999999865433    223445678899999776654    45556678999999976 33           233


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ++...|+.||++.+.+++.++.|   +|+++++|+||.|.++.
T Consensus       167 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  209 (267)
T 1vl8_A          167 PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKM  209 (267)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTT
T ss_pred             CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccc
Confidence            45779999999999999999987   69999999999998875

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.96  E-value=3.6e-28  Score=213.02  Aligned_cols=168  Identities=15%  Similarity=0.176  Sum_probs=135.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||++++++|+++|++|++++|+....+   +..++.   +.++.++++|++|.+++++++++     +
T Consensus        27 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~---~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (277)
T 4dqx_A           27 QRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAV---RVANEI---GSKAFGVRVDVSSAKDAESMVEKTTAKWG  100 (277)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH---HHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---HHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            489999999999999999999999999999997643332   222222   35788999999999999988865     6


Q ss_pred             CCcEEEEcccccCcCCC----CcChHHHHHHHHHHHHHH----HHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGES----TLDPLKYYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~----~~~~~~~~~~n~~~t~~l----l~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||+......    .+..+..+++|+.++..+    ++.|++.+.++||++||...+           .+.++
T Consensus       101 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~~~  169 (277)
T 4dqx_A          101 RVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTAT-----------SAIAD  169 (277)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGT-----------SCCTT
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhC-----------cCCCC
Confidence            89999999998655433    334455677999996654    455556666799999998876           34455


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.||++.+.+++.++.|   .|+++++|+||.|.++.
T Consensus       170 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~  210 (277)
T 4dqx_A          170 RTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPY  210 (277)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCch
Confidence            789999999999999999988   58999999999998864

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.96  E-value=2.5e-28  Score=212.80  Aligned_cols=173  Identities=14%  Similarity=0.090  Sum_probs=139.0

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|+||||||+||||++++++|+++|++|++++|+....++..+.+.+..  +.++.++++|++|.+++++++++     
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   96 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF--GTDVHTVAIDLAEPDAPAELARRAAEAF   96 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--CCCEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            34999999999999999999999999999999987655555444444322  35789999999999999888765     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHH----HHHHcC-CCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLE----SMARHG-VDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~----~~~~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                      +++|+||||||+.....    ..++.+..+++|+.++..+++    .|++.+ .++||++||...+           .+.
T Consensus        97 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~  165 (266)
T 4egf_A           97 GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAAL-----------APL  165 (266)
T ss_dssp             TSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT-----------SCC
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhc-----------cCC
Confidence            68999999999865443    333455678899999666554    455554 5699999998876           344


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ++...|+.||++.+.+++.++.|   +||++++|+||.|.++.
T Consensus       166 ~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  208 (266)
T 4egf_A          166 PDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEM  208 (266)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHH
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCch
Confidence            55789999999999999999988   68999999999999874

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.96  E-value=5.1e-28  Score=209.44  Aligned_cols=169  Identities=17%  Similarity=0.063  Sum_probs=136.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||++++++|+++|++|++++|+..  ++..+.+..   .+.++.++.+|++|.+++++++++     +
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~---~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   78 (255)
T 2q2v_A            4 GKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIAR---HGVKAVHHPADLSDVAQIEALFALAEREFG   78 (255)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHT---TSCCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHh---cCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999998654  333333332   235688899999999999988864     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||.....+    ..++.+..+++|+.+    ++.+++.|++.+.++||++||.+.+.           +.++
T Consensus        79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  147 (255)
T 2q2v_A           79 GVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLV-----------GSTG  147 (255)
T ss_dssp             SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS-----------CCTT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhcc-----------CCCC
Confidence            8999999999765432    334455678899996    55567777787778999999988762           2334


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.||.+.+.+++.++.|   +|+++++|+||.|++|.
T Consensus       148 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  188 (255)
T 2q2v_A          148 KAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPL  188 (255)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcc
Confidence            678999999999999999987   58999999999999874

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.96  E-value=8.1e-28  Score=209.03  Aligned_cols=173  Identities=17%  Similarity=0.107  Sum_probs=136.3

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|+||||||+||||++++++|+++|++|++++|+....++..+.+...   +.++.++.+|++|.+++++++++     
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~  104 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA---GGEAESHACDLSHSDAIAAFATGVLAAH  104 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence            4489999999999999999999999999999998765554444444432   46789999999999999988865     


Q ss_pred             CCCcEEEEcccccC-cC----CCCcChHHHHHHHHHHHHHHHHH----HHHcCCCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAY-VG----ESTLDPLKYYHNITSNTLVVLES----MARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~-~~----~~~~~~~~~~~~n~~~t~~ll~~----~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                      +++|+||||||... ..    ...++.+..+++|+.++..++++    |++.+.++||++||.+.+           .+.
T Consensus       105 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~  173 (262)
T 3rkr_A          105 GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGK-----------NPV  173 (262)
T ss_dssp             SCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSS-----------CCC
T ss_pred             CCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhc-----------CCC
Confidence            68999999999732 22    23444566888999996665554    556677899999998775           344


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      .+...|+.||++.+.+++.++.+   .|+++++++||.|.++..
T Consensus       174 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~  217 (262)
T 3rkr_A          174 ADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFG  217 (262)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcc
Confidence            55789999999999999999987   799999999999988753

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.96  E-value=3.1e-28  Score=209.67  Aligned_cols=172  Identities=16%  Similarity=0.112  Sum_probs=136.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+++||||+||||++++++|+++|++|++++|+....++..+.+.  ...+.++.++.+|++|.+++++++++     ++
T Consensus         3 k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            3 RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHW--HAYADKVLRVRADVADEGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHS--TTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--HhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            889999999999999999999999999999986543333322221  11235788999999999999988864     58


Q ss_pred             CcEEEEcccccCcCC-------CCcChHHHHHHHHHHHH----HHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGE-------STLDPLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~-------~~~~~~~~~~~n~~~t~----~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                      +|+||||||......       ..++.+..+++|+.++.    .+++.|++.+.++||++||...+.           +.
T Consensus        81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~  149 (250)
T 2cfc_A           81 IDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLV-----------AF  149 (250)
T ss_dssp             CCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CC
T ss_pred             CCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhcc-----------CC
Confidence            999999999754332       23445667889999865    456666677778999999987762           23


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      ++...|+.||.+.+.+++.++.+   .|+++++++||+|+++..
T Consensus       150 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~  193 (250)
T 2cfc_A          150 PGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMT  193 (250)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTT
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCcc
Confidence            45789999999999999999887   499999999999999863

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.96  E-value=4.3e-28  Score=210.44  Aligned_cols=171  Identities=19%  Similarity=0.178  Sum_probs=136.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+||||||+||||++++++|+++|++|++++|+..+.++..+.++..   +.++.++.+|++|.+++++++++     +
T Consensus        14 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   90 (260)
T 2zat_A           14 NKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE---GLSVTGTVCHVGKAEDRERLVAMAVNLHG   90 (260)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999998654433333333322   35788899999999999888764     5


Q ss_pred             CCcEEEEcccccCc-C----CCCcChHHHHHHHHHHHHHHH----HHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYV-G----ESTLDPLKYYHNITSNTLVVL----ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~-~----~~~~~~~~~~~~n~~~t~~ll----~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||.... .    ...+++++.+++|+.++.+++    +.|++.+.++||++||...+.           +.+
T Consensus        91 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  159 (260)
T 2zat_A           91 GVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYH-----------PFP  159 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS-----------CCT
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcC-----------CCC
Confidence            89999999997531 1    233445667889999976544    445566778999999988872           334


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.||++.+.+++.++.|   +|+++++++||.|.++.
T Consensus       160 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  201 (260)
T 2zat_A          160 NLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNF  201 (260)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSST
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCcc
Confidence            5779999999999999999887   58999999999999875

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.96  E-value=2.3e-28  Score=210.52  Aligned_cols=171  Identities=16%  Similarity=0.094  Sum_probs=136.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEec-CCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN-LSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      +|+++||||+||||++++++|+++|++|++++| +....++..+.++..   +.++.++.+|++|.+++++++++     
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T 2uvd_A            4 GKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL---GSDAIAVRADVANAEDVTNMVKQTVDVF   80 (246)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc---CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            389999999999999999999999999999997 433333333333322   35788999999999999988865     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +++|+||||||......    ..++.+..+++|+.+    ++.+++.|++.+.++||++||.+.+.           +.+
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  149 (246)
T 2uvd_A           81 GQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVT-----------GNP  149 (246)
T ss_dssp             SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH-----------CCT
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcC-----------CCC
Confidence            58999999999865432    334456678899999    55566777777778999999987652           223


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.||.+.+.+++.++.|   +|+++++|+||.|.++.
T Consensus       150 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  191 (246)
T 2uvd_A          150 GQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDM  191 (246)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGC
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcc
Confidence            4678999999999999999877   68999999999999875

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.96  E-value=5e-28  Score=212.31  Aligned_cols=174  Identities=13%  Similarity=0.071  Sum_probs=135.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.+........++.++.+|++|.+++++++++     +
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   85 (280)
T 1xkq_A            6 NKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFG   85 (280)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            38999999999999999999999999999999865444433333332211011788999999999999888765     5


Q ss_pred             CCcEEEEcccccCcCC--------CCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE--------STLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEET  212 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~--------~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~  212 (296)
                      ++|+||||||......        ..+.++..+++|+.++..+++++    ++.+ ++||++||...+...         
T Consensus        86 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~---------  155 (280)
T 1xkq_A           86 KIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQA---------  155 (280)
T ss_dssp             CCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSC---------
T ss_pred             CCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCC---------
Confidence            8999999999764322        23345667889999977655554    4455 899999998776211         


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       213 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                       .++...|+.||++.+.+++.++.|   +|+++++|+||+|++|.
T Consensus       156 -~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  199 (280)
T 1xkq_A          156 -QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGF  199 (280)
T ss_dssp             -CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSH
T ss_pred             -CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCc
Confidence             144678999999999999999976   79999999999999975

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.96  E-value=1.4e-27  Score=210.65  Aligned_cols=172  Identities=16%  Similarity=0.187  Sum_probs=139.1

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcc-hhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNI-GAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (296)
                      .+|+||||||+||||++++++|+++|++|++++|+..... ...+.++   ..+.++.++.+|++|.+++++++++    
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  122 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVE---KEGVKCVLLPGDLSDEQHCKDIVQETVRQ  122 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH---TTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH---hcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3499999999999999999999999999999998654222 1222222   2246789999999999999888865    


Q ss_pred             -CCCcEEEEcccccCcCC-----CCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 -NAFDAVMHFAAVAYVGE-----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 -~~~D~vi~~Ag~~~~~~-----~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                       +++|+||||||......     ..++++..+++|+.++..+++++.+.  ..++||++||...+.           +.+
T Consensus       123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  191 (291)
T 3ijr_A          123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYE-----------GNE  191 (291)
T ss_dssp             HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHH-----------CCT
T ss_pred             cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcC-----------CCC
Confidence             68999999999754321     44556678999999999999988764  346999999988773           234


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.||++.+.+++.++.|   +|+++++|+||.|++|.
T Consensus       192 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~  233 (291)
T 3ijr_A          192 TLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPL  233 (291)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTH
T ss_pred             CChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCc
Confidence            4678999999999999999988   59999999999999974

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.96  E-value=6.9e-28  Score=210.34  Aligned_cols=162  Identities=12%  Similarity=0.113  Sum_probs=132.0

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|+||||||+||||++++++|+++|++|++++|+.....             ..+.++++|++|.+++++++++     
T Consensus        13 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (269)
T 3vtz_A           13 TDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV-------------NVSDHFKIDVTNEEEVKEAVEKTTKKY   79 (269)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT-------------TSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc-------------CceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            3499999999999999999999999999999998654321             3567889999999999988865     


Q ss_pred             CCCcEEEEcccccCcCCC----CcChHHHHHHHHHHHHHHH----HHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGES----TLDPLKYYHNITSNTLVVL----ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~~----~~~~~~~~~~n~~~t~~ll----~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +++|+||||||+......    .+..++.+++|+.++..++    +.|++.+.++||++||...+.           +.+
T Consensus        80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  148 (269)
T 3vtz_A           80 GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYA-----------ATK  148 (269)
T ss_dssp             SCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------BCT
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhcc-----------CCC
Confidence            689999999998654433    2334556789999976654    455666778999999988873           344


Q ss_pred             CCChHHHHHHHHHHHHHHhhhcC--CCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKNS--DMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~~--gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.||++.+.+++.++.|.  ++++++|+||.|+++.
T Consensus       149 ~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~  189 (269)
T 3vtz_A          149 NAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPM  189 (269)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHH
T ss_pred             CChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcc
Confidence            57899999999999999999884  8999999999999874

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.96  E-value=5.4e-28  Score=210.24  Aligned_cols=172  Identities=11%  Similarity=0.018  Sum_probs=128.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc------
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------  143 (296)
                      +|+||||||+||||++++++|+++|++|++++|+....++..+.++..   +.++.++.+|++|.+++++++++      
T Consensus        14 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   90 (266)
T 1xq1_A           14 AKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK---GFQVTGSVCDASLRPEREKLMQTVSSMFG   90 (266)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            389999999999999999999999999999998654443333333332   35788999999999999988865      


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +++|+||||||......    ..+...+.+++|+.++.++++++    ++.+.++||++||...+.           +.+
T Consensus        91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~  159 (266)
T 1xq1_A           91 GKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVV-----------SAS  159 (266)
T ss_dssp             TCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--------------------
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcc-----------CCC
Confidence            68999999999764432    33445567889999988876665    566778999999987762           234


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      +...|+.||++.+.+++.++.+   .|+++++++||+|+++..
T Consensus       160 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  202 (266)
T 1xq1_A          160 VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLA  202 (266)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchh
Confidence            5689999999999999999887   599999999999999864

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.96  E-value=4.4e-28  Score=212.29  Aligned_cols=174  Identities=13%  Similarity=0.080  Sum_probs=132.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||++++++|+++|++|++++|+..+.++..+.+......+.++.++.+|++|.+++++++++     +
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   85 (278)
T 1spx_A            6 EKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFG   85 (278)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999999865443333333321122235788999999999999988864     5


Q ss_pred             CCcEEEEcccccCcCC--------CCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEccccc-ccCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE--------STLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCAT-YGEPEKMPITEE  211 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~--------~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~-~g~~~~~~~~e~  211 (296)
                      ++|+||||||......        ..+..+..+++|+.++..+++++    ++.+ ++||++||... +.          
T Consensus        86 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~----------  154 (278)
T 1spx_A           86 KLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLH----------  154 (278)
T ss_dssp             CCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSS----------
T ss_pred             CCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEeccccccc----------
Confidence            8999999999764332        33445667889999977665554    4446 89999999876 52          


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       212 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                       +.++...|+.||++.+.+++.++.+   +|+++++|+||.|+++..
T Consensus       155 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  200 (278)
T 1spx_A          155 -ATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFG  200 (278)
T ss_dssp             -CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC-
T ss_pred             -CCCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccc
Confidence             2345678999999999999999877   699999999999999863

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.96  E-value=3.8e-28  Score=212.64  Aligned_cols=171  Identities=16%  Similarity=0.123  Sum_probs=140.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----CC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NA  145 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~  145 (296)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.+...   +.++.++.+|++|.+++++++++    ++
T Consensus        33 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~  109 (275)
T 4imr_A           33 GRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS---GGTAQELAGDLSEAGAGTDLIERAEAIAP  109 (275)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT---TCCEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc---CCeEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            499999999999999999999999999999999877766666555443   46789999999999998888764    68


Q ss_pred             CcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHH----HHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVL----ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll----~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +|+||||||......    ..++.+..+++|+.++..++    +.|++.+.++||++||...+.           +..+.
T Consensus       110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~-----------~~~~~  178 (275)
T 4imr_A          110 VDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLR-----------PKSVV  178 (275)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCTTB
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC-----------CCCCc
Confidence            999999999865433    33445567889999966654    445666778999999988762           34446


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..|+.||++.+.+++.++.|   .||++++|+||.|.++.
T Consensus       179 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  218 (275)
T 4imr_A          179 TAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDR  218 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcc
Confidence            77999999999999999988   58999999999998863

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.96  E-value=5.1e-28  Score=215.56  Aligned_cols=181  Identities=22%  Similarity=0.295  Sum_probs=133.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEec-CCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDN-LSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      |+||||||+||||++++++|+++|++|++++| +........ .+..+.....++.++.+|++|.+++++++  .++|+|
T Consensus         2 k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d~v   78 (322)
T 2p4h_X            2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVS-FLTNLPGASEKLHFFNADLSNPDSFAAAI--EGCVGI   78 (322)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCH-HHHTSTTHHHHEEECCCCTTCGGGGHHHH--TTCSEE
T ss_pred             CEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHH-HHHhhhccCCceEEEecCCCCHHHHHHHH--cCCCEE
Confidence            78999999999999999999999999999887 432211111 11111100125778899999999999998  579999


Q ss_pred             EEcccccCcCCCCcC-hHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcccccc-cCCC-CCCCCCCCCC--------CCC
Q 022471          150 MHFAAVAYVGESTLD-PLKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATY-GEPE-KMPITEETPQ--------API  217 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~-~~~~~~~n~~~t~~ll~~~~~~-~~~riV~~SS~~~~-g~~~-~~~~~e~~~~--------~~~  217 (296)
                      ||||+..  .....+ ..+.+++|+.++.++++++++. +.++||++||.+++ +... ..+++|+.+.        .|.
T Consensus        79 ih~A~~~--~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~  156 (322)
T 2p4h_X           79 FHTASPI--DFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPF  156 (322)
T ss_dssp             EECCCCC----------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCT
T ss_pred             EEcCCcc--cCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcc
Confidence            9999743  122223 2458999999999999999987 68899999998754 3322 2345555432        122


Q ss_pred             C-hHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          218 N-PYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       218 ~-~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                      . +|+.||.++|.++..++.++|++++++||++||||+..
T Consensus       157 ~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~  196 (322)
T 2p4h_X          157 GWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVC  196 (322)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCS
T ss_pred             cccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCC
Confidence            2 69999999999999988778999999999999999753

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.96  E-value=8.6e-28  Score=206.83  Aligned_cols=172  Identities=15%  Similarity=0.083  Sum_probs=140.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+++||||+||||++++++|+++|++|++++|+....++..+.+++.   +.++.++.+|++|.+++++++++     +
T Consensus         5 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (247)
T 3lyl_A            5 EKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK---GFKARGLVLNISDIESIQNFFAEIKAENL   81 (247)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999998765555544444433   46789999999999999988865     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHH----HHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLES----MARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~----~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||+.....    ..++.+..+++|+.++.+++++    +++.+.++||++||...+.           +.++
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  150 (247)
T 3lyl_A           82 AIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSA-----------GNPG  150 (247)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH-----------CCTT
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcc-----------CCCC
Confidence            7999999999865433    3445566888999997665544    5556678999999987762           3345


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      ...|+.||++.+.+++.++.+   .|+++++++||.|.++..
T Consensus       151 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  192 (247)
T 3lyl_A          151 QTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMT  192 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTT
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccc
Confidence            789999999999999999987   689999999999998763

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.96  E-value=5.3e-28  Score=209.91  Aligned_cols=173  Identities=15%  Similarity=0.021  Sum_probs=134.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-cchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG-NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      +|+||||||+||||++++++|+++|++|++++|+... .++..+.+....  +.++.++.+|++|.+++++++++     
T Consensus         4 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            4 GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH--GVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH--TSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhcc--CCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            3899999999999999999999999999999986543 333333332211  24688899999999999888865     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHH----HHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~l----l~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +++|+||||||+....+    ..++.+..+++|+.++.++    ++.|++.+.++||++||...+.           +.+
T Consensus        82 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  150 (260)
T 1x1t_A           82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLV-----------ASA  150 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCT
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCc-----------CCC
Confidence            68999999999765432    3344566788999986664    4555566778999999987762           234


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      +...|+.||++.+.+++.++.|   +|+++++|+||.|.+|..
T Consensus       151 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  193 (260)
T 1x1t_A          151 NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLV  193 (260)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchH
Confidence            5679999999999999999887   589999999999999863

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.96  E-value=4.5e-28  Score=211.20  Aligned_cols=164  Identities=18%  Similarity=0.155  Sum_probs=134.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+||||||+||||++++++|+++|++|++++|+....       ++..  ..++.++.+|++|.+++++++++     ++
T Consensus        17 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-------~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   87 (266)
T 3p19_A           17 KLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERL-------KALN--LPNTLCAQVDVTDKYTFDTAITRAEKIYGP   87 (266)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHH-------HTTC--CTTEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-------HHhh--cCCceEEEecCCCHHHHHHHHHHHHHHCCC
Confidence            8999999999999999999999999999999753221       1111  13688899999999999988865     68


Q ss_pred             CcEEEEcccccCcCCC----CcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGES----TLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~~----~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +|+||||||+......    .++.++.+++|+.++..    +++.|++.+.++||++||.+.+           .+.++.
T Consensus        88 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~-----------~~~~~~  156 (266)
T 3p19_A           88 ADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGK-----------KTFPDH  156 (266)
T ss_dssp             EEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT-----------SCCTTC
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhC-----------CCCCCC
Confidence            9999999998654432    33445578899999766    6666677788899999998876           234457


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..|+.||++.+.+++.++.|   +|+++++|+||.|.++.
T Consensus       157 ~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~  196 (266)
T 3p19_A          157 AAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTEL  196 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSG
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccch
Confidence            89999999999999999988   69999999999999875

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.96  E-value=6.3e-28  Score=207.90  Aligned_cols=170  Identities=15%  Similarity=0.071  Sum_probs=130.2

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-CCCc
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFD  147 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D  147 (296)
                      .+|+||||||+||||++++++|+++|++|++++|+....++..   ++.   ..++.++.+|++|.+++++++++ +++|
T Consensus        13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~---~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~id   86 (249)
T 3f9i_A           13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLG---NAL---KDNYTIEVCNLANKEECSNLISKTSNLD   86 (249)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HHH---CSSEEEEECCTTSHHHHHHHHHTCSCCS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH---HHh---ccCccEEEcCCCCHHHHHHHHHhcCCCC
Confidence            4499999999999999999999999999999998654333222   222   24688899999999999999876 5799


Q ss_pred             EEEEcccccCcC----CCCcChHHHHHHHHHHHHHHH----HHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCCh
Q 022471          148 AVMHFAAVAYVG----ESTLDPLKYYHNITSNTLVVL----ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (296)
Q Consensus       148 ~vi~~Ag~~~~~----~~~~~~~~~~~~n~~~t~~ll----~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~  219 (296)
                      +||||||+....    ...++.+..+++|+.++..++    +.|++.+.++||++||.+.+           .+.++...
T Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~~~~~~  155 (249)
T 3f9i_A           87 ILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGI-----------AGNPGQAN  155 (249)
T ss_dssp             EEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC-------------CCSCSHH
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhc-----------cCCCCCch
Confidence            999999986532    355677889999999966654    55556677899999998776           23445789


Q ss_pred             HHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          220 YGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       220 Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      |+.||++.+.+++.++.+   .|+++++++||.|.++..
T Consensus       156 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  194 (249)
T 3f9i_A          156 YCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMT  194 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC----
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcc
Confidence            999999999999999987   689999999999998753

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.96  E-value=1.2e-27  Score=207.92  Aligned_cols=165  Identities=12%  Similarity=0.100  Sum_probs=135.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+||||||+||||++++++|+++|++|++++|+.....            ..++.++.+|++|.+++++++++     +
T Consensus        28 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   95 (260)
T 3un1_A           28 QKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA------------DPDIHTVAGDISKPETADRIVREGIERFG   95 (260)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS------------STTEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc------------cCceEEEEccCCCHHHHHHHHHHHHHHCC
Confidence            489999999999999999999999999999998654322            13688999999999999988865     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHH----HHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLES----MARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~----~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||+....+    ..+++++.+++|+.++.+++++    |++.+.++||++||...+..         .+..+
T Consensus        96 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~---------~~~~~  166 (260)
T 3un1_A           96 RIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQP---------MVGMP  166 (260)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSC---------BTTCC
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccC---------CCCCc
Confidence            8999999999865443    3344566788999997766555    46777789999999776522         12335


Q ss_pred             CChHHHHHHHHHHHHHHhhhcC---CCcEEEEecCeeecCCC
Q 022471          217 INPYGKAKKMAEDIILDFSKNS---DMAVMILRYFNVIGSDP  255 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~lrpg~v~Gp~~  255 (296)
                      ...|+.||++.+.+++.++.|.   ||++++|+||.|++|..
T Consensus       167 ~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~  208 (260)
T 3un1_A          167 SALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMH  208 (260)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTS
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCC
Confidence            6789999999999999999884   89999999999999863

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.96  E-value=2.6e-28  Score=211.07  Aligned_cols=167  Identities=16%  Similarity=0.187  Sum_probs=133.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||++++++|+++|++|++++|+....++   ..+++   +.++.++++|++|.+++++++++     +
T Consensus         6 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~---~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (253)
T 1hxh_A            6 GKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQ---LAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRLG   79 (253)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHH---HHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---HHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999876433222   22222   35688999999999999888765     6


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHH----HHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t----~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||......    ..++.+..+++|+.++    +.+++.|++.+ ++||++||.+.+.           +.++
T Consensus        80 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~-----------~~~~  147 (253)
T 1hxh_A           80 TLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWL-----------PIEQ  147 (253)
T ss_dssp             SCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTS-----------CCTT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcC-----------CCCC
Confidence            8999999999865433    2344556788998874    45666777767 8999999988762           3345


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---C--CCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---S--DMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~--gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.||++.+.+++.++.|   +  |+++++|+||.|++|.
T Consensus       148 ~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~  190 (253)
T 1hxh_A          148 YAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPM  190 (253)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCch
Confidence            678999999999999999887   3  9999999999999975

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.96  E-value=4.6e-28  Score=213.70  Aligned_cols=182  Identities=13%  Similarity=0.098  Sum_probs=146.0

Q ss_pred             CCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-CCC
Q 022471           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAF  146 (296)
Q Consensus        68 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~  146 (296)
                      ..+|+||||||+||||++++++|+++|++|++++|+..+.++..   +++   +.++.++.+|++|.+++++++++ +++
T Consensus        14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~---~~~---~~~~~~~~~Dl~d~~~v~~~~~~~~~i   87 (291)
T 3rd5_A           14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAA---RTM---AGQVEVRELDLQDLSSVRRFADGVSGA   87 (291)
T ss_dssp             CTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---TTS---SSEEEEEECCTTCHHHHHHHHHTCCCE
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHH---HHh---cCCeeEEEcCCCCHHHHHHHHHhcCCC
Confidence            34499999999999999999999999999999998654333222   222   35789999999999999999976 489


Q ss_pred             cEEEEcccccCcC--CCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCC-CCCC-CCCCCCCCCChHHH
Q 022471          147 DAVMHFAAVAYVG--ESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPE-KMPI-TEETPQAPINPYGK  222 (296)
Q Consensus       147 D~vi~~Ag~~~~~--~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~-~~~~-~e~~~~~~~~~Y~~  222 (296)
                      |+||||||+....  ...+..+..+++|+.++.++++++.+...++||++||.+.+.... .... .+..+..+...|+.
T Consensus        88 D~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  167 (291)
T 3rd5_A           88 DVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQ  167 (291)
T ss_dssp             EEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHH
T ss_pred             CEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcchHHH
Confidence            9999999986532  356677889999999999999999887777999999988774321 1111 22234556778999


Q ss_pred             HHHHHHHHHHHhhhc---CC--CcEEEEecCeeecCCC
Q 022471          223 AKKMAEDIILDFSKN---SD--MAVMILRYFNVIGSDP  255 (296)
Q Consensus       223 sK~~~e~~~~~~~~~---~g--i~~~~lrpg~v~Gp~~  255 (296)
                      ||++.+.+++.++.+   .|  +++++++||.|.++..
T Consensus       168 sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~  205 (291)
T 3rd5_A          168 SKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQ  205 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-
T ss_pred             HHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccc
Confidence            999999999999987   45  9999999999988753

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.95  E-value=5.1e-28  Score=209.56  Aligned_cols=170  Identities=20%  Similarity=0.188  Sum_probs=135.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |++|||||+||||++++++|+++|++|++++|+....++..+.++..   +.++.++.+|++|.+++++++++     ++
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (256)
T 1geg_A            3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA---GGHAVAVKVDVSDRDQVFAAVEQARKTLGG   79 (256)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            78999999999999999999999999999998654444443433332   35688999999999999988864     58


Q ss_pred             CcEEEEcccccCcCC----CCcChHHHHHHHHHHHHH----HHHHHHHcC-CCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLV----VLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      +|+||||||.....+    ..++.+..+++|+.++..    +++.|++.+ .++||++||...+.           +.++
T Consensus        80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  148 (256)
T 1geg_A           80 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV-----------GNPE  148 (256)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-----------CCTT
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcC-----------CCCC
Confidence            999999999764432    233445678899998655    555566666 67999999987652           2334


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.||++.+.+++.++.|   +|+++++|+||.|.++.
T Consensus       149 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  189 (256)
T 1geg_A          149 LAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPM  189 (256)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccch
Confidence            678999999999999999987   69999999999998864

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.95  E-value=5.5e-28  Score=209.78  Aligned_cols=174  Identities=13%  Similarity=0.173  Sum_probs=138.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----CC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NA  145 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~  145 (296)
                      +|+||||||+||||++++++|+++|++|++++|+....++..+.+..... +.++.++.+|++|.+++++++++    .+
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (260)
T 2z1n_A            7 GKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVS-GAQVDIVAGDIREPGDIDRLFEKARDLGG   85 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHST-TCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-CCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            38999999999999999999999999999999865444444343332111 13688999999999999888864    23


Q ss_pred             CcEEEEcccccCcCC----CCcChHHHHHHHHHHH----HHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGE----STLDPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t----~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +|+||||||......    ..++++..+++|+.++    +.+++.|++.+.++||++||...+.           +.++.
T Consensus        86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~  154 (260)
T 2z1n_A           86 ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLR-----------PWQDL  154 (260)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCTTB
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcC-----------CCCCC
Confidence            999999999754432    3344566788999996    5566777777778999999988762           33456


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      ..|+.||++.+.+++.++.+   +|+++++|+||.|+++..
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  195 (260)
T 2z1n_A          155 ALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRV  195 (260)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCC
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchh
Confidence            79999999999999999887   589999999999999864

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.95  E-value=1.9e-27  Score=208.40  Aligned_cols=175  Identities=13%  Similarity=0.129  Sum_probs=139.2

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|++|||||+||||++++++|+++|++|++++|+....++..+.++..   +.++.++++|++|.+++++++++     
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  107 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV---GGKALPIRCDVTQPDQVRGMLDQMTGEL  107 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3499999999999999999999999999999998766655555555443   45788999999999999988875     


Q ss_pred             CCCcEEEEcccccCcCCC----CcChHHHHHHHHHHHHHHHH----HHHHcCC-CEEEEEcccccccCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGES----TLDPLKYYHNITSNTLVVLE----SMARHGV-DTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~~----~~~~~~~~~~n~~~t~~ll~----~~~~~~~-~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                      +++|+||||||+......    .++.++.+++|+.++..+++    .|++++. ++||++||...+...         ..
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~---------~~  178 (276)
T 3r1i_A          108 GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIIN---------IP  178 (276)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---------CS
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccC---------CC
Confidence            589999999998765443    33445567899999666554    4555553 799999998765211         12


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      .+.+.|+.||++.+.+++.++.|   +||++++|+||.|.++..
T Consensus       179 ~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~  222 (276)
T 3r1i_A          179 QQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELV  222 (276)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTT
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcc
Confidence            34678999999999999999988   799999999999998753

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.95  E-value=1.2e-28  Score=216.55  Aligned_cols=161  Identities=19%  Similarity=0.264  Sum_probs=138.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      ||+||||| +|+||++++++|+++|++|++++|+....             ..++.++.+|++|.+++.++++ +++|+|
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------------~~~~~~~~~Dl~d~~~~~~~~~-~~~d~v   67 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM-------------PAGVQTLIADVTRPDTLASIVH-LRPEIL   67 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-------------CTTCCEEECCTTCGGGCTTGGG-GCCSEE
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-------------ccCCceEEccCCChHHHHHhhc-CCCCEE
Confidence            47899999 59999999999999999999999865432             2568899999999999999885 359999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~  229 (296)
                      ||+||...     .++...+++|+.++.++++++++.+.++|||+||.++|+.....+++|+.+..|.++|+.+|.++|.
T Consensus        68 ih~a~~~~-----~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  142 (286)
T 3gpi_A           68 VYCVAASE-----YSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEA  142 (286)
T ss_dssp             EECHHHHH-----HC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHH
T ss_pred             EEeCCCCC-----CCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHH
Confidence            99999642     3456778899999999999999988899999999999998888889999999999999999999999


Q ss_pred             HHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          230 IILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       230 ~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                      + +.+     ++++++||++||||+..
T Consensus       143 ~-~~~-----~~~~ilR~~~v~G~~~~  163 (286)
T 3gpi_A          143 L-LAA-----YSSTILRFSGIYGPGRL  163 (286)
T ss_dssp             H-GGG-----SSEEEEEECEEEBTTBC
T ss_pred             H-Hhc-----CCeEEEecccccCCCch
Confidence            8 553     89999999999999853

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.95  E-value=6.4e-28  Score=212.49  Aligned_cols=173  Identities=16%  Similarity=0.181  Sum_probs=140.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC---eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc---
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY---RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (296)
                      +|++|||||+||||++++++|+++|+   +|++++|+....++..+.+....+ +.++.++.+|++|.+++++++++   
T Consensus        33 ~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~  111 (287)
T 3rku_A           33 KKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFP-NAKVHVAQLDITQAEKIKPFIENLPQ  111 (287)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCT-TCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCC-CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            38999999999999999999999998   999999876555555555544322 35788999999999999998876   


Q ss_pred             --CCCcEEEEcccccC-cCC----CCcChHHHHHHHHHHHHHHH----HHHHHcCCCEEEEEcccccccCCCCCCCCCCC
Q 022471          144 --NAFDAVMHFAAVAY-VGE----STLDPLKYYHNITSNTLVVL----ESMARHGVDTLIYSSTCATYGEPEKMPITEET  212 (296)
Q Consensus       144 --~~~D~vi~~Ag~~~-~~~----~~~~~~~~~~~n~~~t~~ll----~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~  212 (296)
                        +++|+||||||+.. ...    ..+++++.+++|+.++..++    +.|++.+.++||++||.+.+           .
T Consensus       112 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~-----------~  180 (287)
T 3rku_A          112 EFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGR-----------D  180 (287)
T ss_dssp             GGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT-----------S
T ss_pred             hcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhc-----------C
Confidence              58999999999754 222    34455668899999966655    44566777899999998776           3


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       213 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +.++...|+.||++.+.+++.++.|   +||++++|+||.|.++.
T Consensus       181 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~  225 (287)
T 3rku_A          181 AYPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEF  225 (287)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcc
Confidence            3445789999999999999999988   68999999999999874

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.95  E-value=7.8e-28  Score=207.55  Aligned_cols=167  Identities=19%  Similarity=0.176  Sum_probs=131.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+++||||+||||++++++|+++|++|++++|+....++.   .+++   +.++.++.+|++|.+++++++++     ++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   74 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQEL---KDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWCN   74 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHHH---CTTEEEEECCTTCHHHHHHHHHTSCTTTCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHh---cCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            5899999999999999999999999999999864332222   2222   14688999999999999998875     58


Q ss_pred             CcEEEEcccccC-cC----CCCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAY-VG----ESTLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       146 ~D~vi~~Ag~~~-~~----~~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      +|+||||||+.. ..    ...++.+..+++|+.++..    +++.|++.+.++||++||.+.+           .+.++
T Consensus        75 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~-----------~~~~~  143 (248)
T 3asu_A           75 IDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGS-----------WPYAG  143 (248)
T ss_dssp             CCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT-----------SCCTT
T ss_pred             CCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhc-----------cCCCC
Confidence            999999999753 22    2334556688999999655    4555556677899999998775           23445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeee-cCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVI-GSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~-Gp~  254 (296)
                      ...|+.||++.+.+++.++.|   .|+++++|+||.|. .+.
T Consensus       144 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~  185 (248)
T 3asu_A          144 GNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEF  185 (248)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC---
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcc
Confidence            779999999999999999987   58999999999999 454

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.95  E-value=1.7e-28  Score=220.41  Aligned_cols=181  Identities=22%  Similarity=0.270  Sum_probs=135.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +|+||||||+||||++++++|+++|++|+++.|+..+..... .+..+. ...++.++.+|++|.+++.+++  .++|+|
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~-~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~--~~~D~V   84 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVS-HLLELQ-ELGDLKIFRADLTDELSFEAPI--AGCDFV   84 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTH-HHHHHG-GGSCEEEEECCTTTSSSSHHHH--TTCSEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHH-HHHhcC-CCCcEEEEecCCCChHHHHHHH--cCCCEE
Confidence            389999999999999999999999999999888654332211 111111 1246888999999999999888  579999


Q ss_pred             EEcccccCcCCCCcCh-HHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcccc-cccCCC---CCCCCCCCCCC--------
Q 022471          150 MHFAAVAYVGESTLDP-LKYYHNITSNTLVVLESMARHG-VDTLIYSSTCA-TYGEPE---KMPITEETPQA--------  215 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~-~~~~~~n~~~t~~ll~~~~~~~-~~riV~~SS~~-~~g~~~---~~~~~e~~~~~--------  215 (296)
                      ||+||....  ...++ .+.+++|+.++.++++++++.+ +++|||+||.+ +|+...   ..+++|+.+..        
T Consensus        85 ih~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  162 (338)
T 2rh8_A           85 FHVATPVHF--ASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAK  162 (338)
T ss_dssp             EEESSCCCC-----------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------
T ss_pred             EEeCCccCC--CCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccC
Confidence            999986522  22233 3488999999999999999985 89999999987 443221   12566664221        


Q ss_pred             C-CChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          216 P-INPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       216 ~-~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                      + ..+|+.||.++|.+++.+++++|++++++||++||||+..
T Consensus       163 ~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~  204 (338)
T 2rh8_A          163 PPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLT  204 (338)
T ss_dssp             CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSS
T ss_pred             CccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCC
Confidence            1 2269999999999999988778999999999999999754

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.95  E-value=1e-27  Score=207.60  Aligned_cols=174  Identities=14%  Similarity=0.083  Sum_probs=137.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+|+||||+||||++++++|+++|++|++++|+....++..+.++..   +.++.++.+|++|.+++++++++     +
T Consensus        13 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (260)
T 3awd_A           13 NRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME---GHDVSSVVMDVTNTESVQNAVRSVHEQEG   89 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            489999999999999999999999999999998654443333343332   35789999999999999988864     5


Q ss_pred             CCcEEEEcccccC-cCC----CCcChHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAY-VGE----STLDPLKYYHNITSNTLVVLESMA----RHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~-~~~----~~~~~~~~~~~n~~~t~~ll~~~~----~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||... ...    ..+...+.+++|+.++.++++++.    +.+.++||++||.+.+...         +..
T Consensus        90 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------~~~  160 (260)
T 3awd_A           90 RVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVN---------RPQ  160 (260)
T ss_dssp             CCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------SSS
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccC---------CCC
Confidence            8999999999764 222    223345678899999877666554    4567899999998765221         122


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      +...|+.||++.+.+++.++.+   +|+++++++||+|++|..
T Consensus       161 ~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~  203 (260)
T 3awd_A          161 QQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLT  203 (260)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTT
T ss_pred             CccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchh
Confidence            3478999999999999999988   799999999999999864

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.95  E-value=4.7e-28  Score=209.23  Aligned_cols=169  Identities=18%  Similarity=0.170  Sum_probs=124.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+||||||+||||++++++|+++|++|++++|+....++..+.++..   +.++.++.+|++|.+++++++++     +
T Consensus         9 ~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   85 (253)
T 3qiv_A            9 NKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD---GGTAISVAVDVSDPESAKAMADRTLAEFG   85 (253)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc---CCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            499999999999999999999999999999998765555444444432   46788999999999999988865     5


Q ss_pred             CCcEEEEcccccC---cC----CCCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAY---VG----ESTLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (296)
Q Consensus       145 ~~D~vi~~Ag~~~---~~----~~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~  213 (296)
                      ++|+||||||+..   ..    ...+..++.+++|+.+    ++.+++.|++.+.++||++||...|             
T Consensus        86 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~-------------  152 (253)
T 3qiv_A           86 GIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW-------------  152 (253)
T ss_dssp             CCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-----------------
T ss_pred             CCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc-------------
Confidence            8999999999732   11    2334456688999999    6667777777778899999998776             


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       214 ~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                       .+...|+.||++.+.+++.++.|   .|+++++++||.|+++..
T Consensus       153 -~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  196 (253)
T 3qiv_A          153 -LYSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEAN  196 (253)
T ss_dssp             --------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC--------
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccch
Confidence             13567999999999999999988   489999999999999864

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.95  E-value=8.6e-28  Score=208.35  Aligned_cols=170  Identities=17%  Similarity=0.220  Sum_probs=134.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC--cchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG--NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      |++|||||+||||++++++|+++|++|++++|+...  .++..+.++.   .+.++.++.+|++|.+++++++++     
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (258)
T 3a28_C            3 KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEA---ADQKAVFVGLDVTDKANFDSAIDEAAEKL   79 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHT---TTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            899999999999999999999999999999986543  2333333322   245788999999999999888864     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHH----HHHHcCC-CEEEEEcccccccCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLE----SMARHGV-DTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~----~~~~~~~-~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                      +++|+||||||.....+    ..++++..+++|+.++..+++    .|++.+. ++||++||...+.           +.
T Consensus        80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~  148 (258)
T 3a28_C           80 GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQ-----------GF  148 (258)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTS-----------CC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhcc-----------CC
Confidence            58999999999865433    334456678899999666554    4445566 8999999987762           33


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ++...|+.||++.+.+++.++.|   +|+++++++||.|.++.
T Consensus       149 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~  191 (258)
T 3a28_C          149 PILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGM  191 (258)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChh
Confidence            45679999999999999999987   68999999999998763

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.95  E-value=8.3e-28  Score=213.18  Aligned_cols=172  Identities=19%  Similarity=0.178  Sum_probs=139.5

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|+||||||+||||++++++|+++|++|++++|+....++..+.++..   +.++.++.+|++|.+++++++++     
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  106 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ---GFDAHGVVCDVRHLDEMVRLADEAFRLL  106 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCceEEEEccCCCHHHHHHHHHHHHHhC
Confidence            3489999999999999999999999999999998765555444444432   46789999999999999988865     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHH----HHHcC-CCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLES----MARHG-VDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~----~~~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                      +++|+||||||+.....    ..++.+..+++|+.++.+++++    +++.+ .++||++||.+.+           .+.
T Consensus       107 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~  175 (301)
T 3tjr_A          107 GGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGL-----------VPN  175 (301)
T ss_dssp             SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT-----------SCC
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhc-----------CCC
Confidence            58999999999865433    3344566889999997765555    55555 5799999998876           344


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ++...|+.||++.+.+++.++.|   .|+++++|+||.|.++.
T Consensus       176 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  218 (301)
T 3tjr_A          176 AGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKL  218 (301)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCcccccc
Confidence            55789999999999999999987   58999999999998764

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.95  E-value=7.1e-28  Score=211.10  Aligned_cols=173  Identities=17%  Similarity=0.112  Sum_probs=139.1

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|++|||||+||||++++++|+++|++|++++|+.....+..+.+....  +.++.++.+|++|.+++++++++     
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  103 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGAT--GRRCLPLSMDVRAPPAVMAAVDQALKEF  103 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHH--SSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            34999999999999999999999999999999987654444444443222  35789999999999999888865     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +++|+||||||......    ..++++..+++|+.++.++++++    ++.+.++||++||...+.           +..
T Consensus       104 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  172 (277)
T 4fc7_A          104 GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNR-----------GQA  172 (277)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHH-----------TCT
T ss_pred             CCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC-----------CCC
Confidence            68999999999754433    34455668889999987766655    445567999999987762           334


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.||++.+.+++.++.|   +||++++|+||.|+++.
T Consensus       173 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~  214 (277)
T 4fc7_A          173 LQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTE  214 (277)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecch
Confidence            4678999999999999999988   58999999999999873

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.95  E-value=6.1e-28  Score=208.84  Aligned_cols=172  Identities=18%  Similarity=0.156  Sum_probs=137.7

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEe-cCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVD-NLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (296)
                      .+|+||||||+||||++++++|+++|++|++++ |+.....+..+.++..   +.++.++.+|++|.+++++++++    
T Consensus        12 ~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (256)
T 3ezl_A           12 SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL---GFDFYASEGNVGDWDSTKQAFDKVKAE   88 (256)
T ss_dssp             -CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc---CCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence            349999999999999999999999999999988 4444433334443332   46789999999999999988865    


Q ss_pred             -CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          144 -NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       144 -~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                       +++|+||||||+.....    ..++.++.+++|+.++..    +++.|++.+.++||++||...+           .+.
T Consensus        89 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~  157 (256)
T 3ezl_A           89 VGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQ-----------KGQ  157 (256)
T ss_dssp             TCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGG-----------GSC
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhc-----------cCC
Confidence             58999999999865433    334455688899999544    5666777777899999998766           234


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ++...|+.||++.+.+++.++.+   .|+++++++||.|.++.
T Consensus       158 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  200 (256)
T 3ezl_A          158 FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDM  200 (256)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcc
Confidence            45789999999999999999987   68999999999998874

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.95  E-value=7.2e-28  Score=207.88  Aligned_cols=171  Identities=13%  Similarity=0.143  Sum_probs=137.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+||||||+||||++++++|+++|++|++++|+....++..+.++..   +.++.++.+|++|.+++++++++     +
T Consensus        11 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   87 (255)
T 1fmc_A           11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL---GGQAFACRCDITSEQELSALADFAISKLG   87 (255)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            389999999999999999999999999999998654443333333332   35788999999999999988864     5


Q ss_pred             CCcEEEEcccccCcCC---CCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE---STLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~---~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      ++|+||||||......   ..+++...+++|+.++.++++++    ++.+.++||++||...+.           +.++.
T Consensus        88 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~  156 (255)
T 1fmc_A           88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN-----------KNINM  156 (255)
T ss_dssp             SCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC-----------CCTTC
T ss_pred             CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcC-----------CCCCC
Confidence            8999999999865432   23445667889999977766555    456778999999988763           33457


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ++|+.||++.+.+++.++.+   .|+++++++||.++++.
T Consensus       157 ~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~  196 (255)
T 1fmc_A          157 TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDA  196 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHH
T ss_pred             cccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchh
Confidence            89999999999999999877   59999999999999874

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.95  E-value=1.2e-27  Score=207.56  Aligned_cols=161  Identities=14%  Similarity=0.091  Sum_probs=131.2

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|++|||||++|||+++|+.|+++|++|++++|+..+.             ..+..++++|++|.+++++++++     
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG-------------LPEELFVEADLTTKEGCAIVAEATRQRL   76 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT-------------SCTTTEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC-------------CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            449999999999999999999999999999999854321             12345789999999999888765     


Q ss_pred             CCCcEEEEcccccCcC--C----CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVG--E----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~--~----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~  213 (296)
                      +++|+||||||+....  +    ..+++++.+++|+.+    ++.+++.|++++.++||++||...+           .+
T Consensus        77 G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~-----------~~  145 (261)
T 4h15_A           77 GGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRV-----------LP  145 (261)
T ss_dssp             SSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-----------SC
T ss_pred             CCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhc-----------cC
Confidence            7899999999974321  2    334556678899988    5567788888888899999997764           22


Q ss_pred             C-CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecC
Q 022471          214 Q-APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGS  253 (296)
Q Consensus       214 ~-~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp  253 (296)
                      . .....|++||.+.+.+++.++.|   +||+|++|.||.|..|
T Consensus       146 ~~~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~  189 (261)
T 4h15_A          146 LPESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETE  189 (261)
T ss_dssp             CTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCc
Confidence            2 23578999999999999999988   7999999999999876

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.95  E-value=1.1e-27  Score=208.01  Aligned_cols=167  Identities=19%  Similarity=0.194  Sum_probs=132.2

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|+||||||+||||++++++|+++|++|++++|+...   ..+.+.+.     ++.++.+|++|.+++++++++     
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~---~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~   97 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHA---SVTELRQA-----GAVALYGDFSCETGIMAFIDLLKTQT   97 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCH---HHHHHHHH-----TCEEEECCTTSHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHH---HHHHHHhc-----CCeEEECCCCCHHHHHHHHHHHHHhc
Confidence            34899999999999999999999999999999986543   23333332     378899999999999988865     


Q ss_pred             CCCcEEEEcccccCcCCCC---cChHHHHHHHHHHHHHHH----HHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGEST---LDPLKYYHNITSNTLVVL----ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~~~---~~~~~~~~~n~~~t~~ll----~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      +++|+||||||+......+   ++.+..+++|+.++..++    +.|++.+.++||++||...+           .+.++
T Consensus        98 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~-----------~~~~~  166 (260)
T 3gem_A           98 SSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTR-----------KGSSK  166 (260)
T ss_dssp             SCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGG-----------TCCSS
T ss_pred             CCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhc-----------CCCCC
Confidence            6899999999986544322   233457889999966655    45556667899999998876           33445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc--CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN--SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~--~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.||++.+.+++.++.|  .+|++++|+||.|.++.
T Consensus       167 ~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~  206 (260)
T 3gem_A          167 HIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQP  206 (260)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC--
T ss_pred             cHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCC
Confidence            789999999999999999988  45999999999998875

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.95  E-value=4e-28  Score=209.26  Aligned_cols=168  Identities=19%  Similarity=0.185  Sum_probs=136.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||++++++|+++|++|++++|+....+   +..+++   +.++.++.+|++|.+++++++++     +
T Consensus         6 gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~---~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   79 (247)
T 3rwb_A            6 GKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAK---AAAASI---GKKARAIAADISDPGSVKALFAEIQALTG   79 (247)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHH---HHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH---HHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence            399999999999999999999999999999987653333   223333   35788999999999999988865     6


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHH----HHHcC-CCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLES----MARHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~----~~~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||+.....    ..+++++.+++|+.++..++++    |++.+ .++||++||...+.           +.+
T Consensus        80 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  148 (247)
T 3rwb_A           80 GIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFA-----------GTP  148 (247)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH-----------TCT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhcc-----------CCC
Confidence            8999999999865433    3344566788999996665554    77766 67999999987762           334


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.||++.+.+++.++.|   +|+++++|+||.|.++.
T Consensus       149 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~  190 (247)
T 3rwb_A          149 NMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDG  190 (247)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCcc
Confidence            5789999999999999999988   79999999999998864

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.95  E-value=1e-27  Score=212.22  Aligned_cols=174  Identities=14%  Similarity=0.094  Sum_probs=135.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.+........++.++.+|++|.+++++++++     +
T Consensus        26 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  105 (297)
T 1xhl_A           26 GKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFG  105 (297)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            48999999999999999999999999999999865444444444433211011688999999999999888864     5


Q ss_pred             CCcEEEEcccccCcCC------CCcChHHHHHHHHHHHHHHH----HHHHHcCCCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE------STLDPLKYYHNITSNTLVVL----ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~------~~~~~~~~~~~n~~~t~~ll----~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                      ++|+||||||+.....      ..+.++..+++|+.++..++    +.|++.+ ++||++||...+...          .
T Consensus       106 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~----------~  174 (297)
T 1xhl_A          106 KIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQA----------H  174 (297)
T ss_dssp             CCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSC----------C
T ss_pred             CCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCC----------C
Confidence            8999999999754332      33445668889999966655    4455556 899999998776211          1


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ++...|+.||++.+.+++.++.|   +|+++++|+||.|+++.
T Consensus       175 ~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~  217 (297)
T 1xhl_A          175 SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGF  217 (297)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSH
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCcc
Confidence            34678999999999999999876   79999999999999874

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.95  E-value=1.1e-27  Score=209.49  Aligned_cols=169  Identities=15%  Similarity=0.174  Sum_probs=133.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |++|||||+||||++++++|+++|++|++++|+....++..+.+.   .. .++.++.+|++|.+++++++++     ++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~---~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   97 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELS---AK-TRVLPLTLDVRDRAAMSAAVDNLPEEFAT   97 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT---TT-SCEEEEECCTTCHHHHHHHHHTCCGGGSS
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh---cC-CcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            799999999999999999999999999999986543333332222   11 4688999999999999998875     57


Q ss_pred             CcEEEEcccccCc-CC----CCcChHHHHHHHHHHHH----HHHHHHHHcCCC-EEEEEcccccccCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYV-GE----STLDPLKYYHNITSNTL----VVLESMARHGVD-TLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       146 ~D~vi~~Ag~~~~-~~----~~~~~~~~~~~n~~~t~----~ll~~~~~~~~~-riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +|+||||||+... ..    ..++.+..+++|+.++.    .+++.|++.+.+ +||++||...+           .+.+
T Consensus        98 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~-----------~~~~  166 (272)
T 2nwq_A           98 LRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGK-----------WPYP  166 (272)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGT-----------SCCT
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhc-----------cCCC
Confidence            9999999997542 22    33445667889999944    466677777777 99999998776           2334


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.||++.+.+++.++.|   +|+++++|+||.|.++.
T Consensus       167 ~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~  208 (272)
T 2nwq_A          167 GSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEF  208 (272)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC---
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcc
Confidence            5678999999999999999987   68999999999999875

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.95  E-value=6.3e-28  Score=210.93  Aligned_cols=170  Identities=15%  Similarity=0.170  Sum_probs=133.1

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|++|||||+||||++++++|+++|++|++++|+....+   +..+++   +.++.++.+|++|.+++++++++     
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~---~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  100 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQ---ETAAEI---GDDALCVPTDVTDPDSVRALFTATVEKF  100 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---HHHHHH---TSCCEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH---HHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3489999999999999999999999999999997644333   222333   25788999999999999988865     


Q ss_pred             CCCcEEEEcccccCc-CC----CCcChHHHHHHHHHHHHH----HHHHHHHcC--CCEEEEEcccccccCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYV-GE----STLDPLKYYHNITSNTLV----VLESMARHG--VDTLIYSSTCATYGEPEKMPITEET  212 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~-~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~--~~riV~~SS~~~~g~~~~~~~~e~~  212 (296)
                      +++|+||||||+... ..    ..++.++.+++|+.++..    +++.|++.+  .++||++||...+           .
T Consensus       101 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~-----------~  169 (272)
T 4dyv_A          101 GRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISAT-----------S  169 (272)
T ss_dssp             SCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTT-----------S
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhc-----------C
Confidence            689999999998543 22    344456688999999544    556666654  4799999998776           3


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       213 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      +.++...|+.||++.+.+++.++.|   +||++++|+||.|.++..
T Consensus       170 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  215 (272)
T 4dyv_A          170 PRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMA  215 (272)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC----
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhh
Confidence            4455789999999999999999987   689999999999998753

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.95  E-value=1.2e-27  Score=209.75  Aligned_cols=172  Identities=16%  Similarity=0.111  Sum_probs=137.2

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|+||||||+||||++++++|+++|++|++++|+....++..+.+++.   +.++.++.+|++|.+++++++++     
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   97 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA---GVEADGRTCDVRSVPEIEALVAAVVERY   97 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEECCCCCHHHHHHHHHHHHHHh
Confidence            3489999999999999999999999999999998654443333444332   35688999999999999888864     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHH------HHcCCCEEEEEcccccccCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESM------ARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~------~~~~~~riV~~SS~~~~g~~~~~~~~e~~~  213 (296)
                      +++|+||||||+.....    ..+.++..+++|+.++.++++++      ++.+.++||++||.+.+           .+
T Consensus        98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~-----------~~  166 (277)
T 2rhc_B           98 GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGK-----------QG  166 (277)
T ss_dssp             CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGT-----------SC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccc-----------cC
Confidence            58999999999865433    23344667889999988777764      44466799999998765           23


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       214 ~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      .++...|+.||.+.+.+++.++.|   .|+++++|+||.|+++.
T Consensus       167 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  210 (277)
T 2rhc_B          167 VVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPM  210 (277)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHH
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCch
Confidence            345678999999999999999887   68999999999999874

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.95  E-value=4.6e-28  Score=209.83  Aligned_cols=169  Identities=14%  Similarity=0.145  Sum_probs=138.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+   +.   +.++.++.+|++|.+++++++++     +
T Consensus         8 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~---~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (255)
T 4eso_A            8 GKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIRE---EF---GPRVHALRSDIADLNEIAVLGAAAGQTLG   81 (255)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HH---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---Hh---CCcceEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4899999999999999999999999999999986543332222   22   35788999999999999888765     6


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (296)
                      ++|+||||||+....+    ..++++..+++|+.++..+++++.+.  ..++||++||.+.+.           +.++..
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~  150 (255)
T 4eso_A           82 AIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEG-----------GHPGMS  150 (255)
T ss_dssp             SEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSS-----------BCTTBH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcC-----------CCCCch
Confidence            8999999999865443    44455667899999999988888753  236899999988762           344578


Q ss_pred             hHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          219 PYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       219 ~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      .|+.||++.+.+++.++.|   +|+++++|+||.|.+|..
T Consensus       151 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~  190 (255)
T 4eso_A          151 VYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTK  190 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSST
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCccc
Confidence            9999999999999999988   589999999999999853

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.95  E-value=1e-27  Score=209.79  Aligned_cols=170  Identities=17%  Similarity=0.164  Sum_probs=136.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEec-CCCCcchhhhhhhhhCCCCCceEEEEccCCCH----HHHHHHhhc--
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDN-LSRGNIGAVKVLQELFPEPGRLQFIYADLGDA----KAVNKFFSE--  143 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~----~~v~~~~~~--  143 (296)
                      |++|||||+||||++++++|+++|++|++++| +....++..+.++...  +.++.++.+|++|.    +++++++++  
T Consensus        12 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   89 (276)
T 1mxh_A           12 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR--AGSAVLCKGDLSLSSSLLDCCEDIIDCSF   89 (276)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS--TTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhc--CCceEEEeccCCCccccHHHHHHHHHHHH
Confidence            89999999999999999999999999999998 5443333333333321  24688999999999    988888764  


Q ss_pred             ---CCCcEEEEcccccCcCCCC---------------cChHHHHHHHHHHHHHHHHHHHH---cCC------CEEEEEcc
Q 022471          144 ---NAFDAVMHFAAVAYVGEST---------------LDPLKYYHNITSNTLVVLESMAR---HGV------DTLIYSST  196 (296)
Q Consensus       144 ---~~~D~vi~~Ag~~~~~~~~---------------~~~~~~~~~n~~~t~~ll~~~~~---~~~------~riV~~SS  196 (296)
                         +++|+||||||+.......               +..+..+++|+.++..+++++.+   .+.      ++||++||
T Consensus        90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS  169 (276)
T 1mxh_A           90 RAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD  169 (276)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECC
T ss_pred             HhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECc
Confidence               5899999999986543322               44456889999999888888776   344      79999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecC
Q 022471          197 CATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGS  253 (296)
Q Consensus       197 ~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp  253 (296)
                      ...+.           +.++...|+.||++.+.+++.++.+   +|+++++|+||.|++|
T Consensus       170 ~~~~~-----------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~  218 (276)
T 1mxh_A          170 AMTDL-----------PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP  218 (276)
T ss_dssp             GGGGS-----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred             hhhcC-----------CCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC
Confidence            88762           3445779999999999999999987   5999999999999998

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.95  E-value=9.3e-28  Score=208.63  Aligned_cols=171  Identities=16%  Similarity=0.134  Sum_probs=134.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.++.   .+.++.++.+|++|.+++++++++     +
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (262)
T 1zem_A            7 GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVRE---KGVEARSYVCDVTSEEAVIGTVDSVVRDFG   83 (262)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT---TTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            38999999999999999999999999999999865443333333332   245788999999999999888764     5


Q ss_pred             CCcEEEEccccc-CcCC----CCcChHHHHHHHHHHHHHHHH----HHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVA-YVGE----STLDPLKYYHNITSNTLVVLE----SMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~-~~~~----~~~~~~~~~~~n~~~t~~ll~----~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||.. ...+    ..+++...+++|+.++.++++    .|++.+.++||++||...+.           +.+
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  152 (262)
T 1zem_A           84 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK-----------GPP  152 (262)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHS-----------CCT
T ss_pred             CCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc-----------CCC
Confidence            899999999976 3222    334456678899999666554    45555678999999987762           233


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.||++.+.+++.++.|   +|+++++|+||.|..+.
T Consensus       153 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~  194 (262)
T 1zem_A          153 NMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGF  194 (262)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcch
Confidence            4678999999999999999877   68999999999998763

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.95  E-value=5.5e-28  Score=206.85  Aligned_cols=167  Identities=17%  Similarity=0.179  Sum_probs=132.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.+      +.++.++.+|++|.+++++++++     +
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   76 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL------GNAVIGIVADLAHHEDVDVAFAAAVEWGG   76 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------GGGEEEEECCTTSHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh------cCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            489999999999999999999999999999998654433333322      13588999999999999988865     6


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||......    ..++.++.+++|+.++..+++++    ++.+ ++||++||.+.+           .+.++
T Consensus        77 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~-----------~~~~~  144 (235)
T 3l6e_A           77 LPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQ-----------VGKAN  144 (235)
T ss_dssp             SCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECC-----------SSCSS
T ss_pred             CCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhc-----------CCCCC
Confidence            8999999999865433    44455668899999976655554    4444 499999998765           23344


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.||++.+.+++.++.|   .|+++++++||.|.++.
T Consensus       145 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  185 (235)
T 3l6e_A          145 ESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEF  185 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC
T ss_pred             CcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcc
Confidence            678999999999999999987   68999999999998875

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.95  E-value=3.9e-28  Score=211.15  Aligned_cols=175  Identities=15%  Similarity=0.117  Sum_probs=137.4

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|++|||||+||||++++++|+++|++|++++|..++.+.+.+..+++...+.++.++.+|++|.+++++++++     
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   89 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF   89 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            349999999999999999999999999999998866555555444444444456899999999999999988865     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +++|+||||||+.....    ..++.+..+++|+.++..+++++.+.  +.++||++||...+..           .++.
T Consensus        90 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~-----------~~~~  158 (262)
T 3ksu_A           90 GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAY-----------TGFY  158 (262)
T ss_dssp             CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHH-----------HCCC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccC-----------CCCC
Confidence            68999999999865543    33444567889999999999888764  4469999999877632           2346


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..|+.||++.+.+++.++.|   .||++++|+||.|.++.
T Consensus       159 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~  198 (262)
T 3ksu_A          159 STYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSF  198 (262)
T ss_dssp             CC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcc
Confidence            78999999999999999988   58999999999998753

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.95  E-value=4e-27  Score=203.25  Aligned_cols=162  Identities=19%  Similarity=0.208  Sum_probs=129.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||++++++|+++|++|++++|+...        ++     ..+.++.+|++|.+++++++++     +
T Consensus         7 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~-----~~~~~~~~D~~d~~~~~~~~~~~~~~~g   73 (250)
T 2fwm_X            7 GKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------EQ-----YPFATEVMDVADAAQVAQVCQRLLAETE   73 (250)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------SC-----CSSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------hc-----CCceEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999986531        00     1278889999999999988864     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||......    ..+++++.+++|+.++..+++++    ++.+.++||++||...+           .+.++
T Consensus        74 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~-----------~~~~~  142 (250)
T 2fwm_X           74 RLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAH-----------TPRIG  142 (250)
T ss_dssp             CCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT-----------SCCTT
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhC-----------CCCCC
Confidence            8999999999865433    33445668889999976655544    66677899999998876           23445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      ...|+.||++.+.+++.++.|   +|+++++|+||.|+++..
T Consensus       143 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  184 (250)
T 2fwm_X          143 MSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQ  184 (250)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----
T ss_pred             CchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccc
Confidence            789999999999999999887   599999999999999863

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.95  E-value=1.4e-27  Score=213.29  Aligned_cols=175  Identities=15%  Similarity=0.154  Sum_probs=136.7

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC---------cchhhhhhhhhCCCCCceEEEEccCCCHHHHHH
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG---------NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNK  139 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~---------~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~  139 (296)
                      .+|+||||||+||||++++++|+++|++|++++|+...         .+++.+..+.....+.++.++.+|++|.+++++
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  124 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQA  124 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence            34899999999999999999999999999999875221         222222222222234678999999999999998


Q ss_pred             Hhhc-----CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHH----HHHHHcC-CCEEEEEcccccccCCCC
Q 022471          140 FFSE-----NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVL----ESMARHG-VDTLIYSSTCATYGEPEK  205 (296)
Q Consensus       140 ~~~~-----~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll----~~~~~~~-~~riV~~SS~~~~g~~~~  205 (296)
                      ++++     +++|+||||||+.....    ..++++..+++|+.++..++    +.|++++ .++||++||...+     
T Consensus       125 ~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~-----  199 (317)
T 3oec_A          125 VVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGL-----  199 (317)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGS-----
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhc-----
Confidence            8865     68999999999865443    33445567889999976655    4455554 5789999998776     


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          206 MPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       206 ~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                            .+.++...|+.||++.+.+++.++.|   .||++++|+||.|+++.
T Consensus       200 ------~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  245 (317)
T 3oec_A          200 ------RGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEM  245 (317)
T ss_dssp             ------SCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH
T ss_pred             ------CCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCcc
Confidence                  23445789999999999999999988   69999999999999874

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.95  E-value=9.1e-28  Score=205.19  Aligned_cols=161  Identities=19%  Similarity=0.203  Sum_probs=130.9

Q ss_pred             CCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCce-EEEEccCCCHHHHHHHhhcCCC
Q 022471           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRL-QFIYADLGDAKAVNKFFSENAF  146 (296)
Q Consensus        68 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~d~~~v~~~~~~~~~  146 (296)
                      ..+|+|+|||||||||++++++|+++|++|++++|+..+..+    +..     .++ .++.+|++  +++.+++  .++
T Consensus        19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~----~~~-----~~~~~~~~~Dl~--~~~~~~~--~~~   85 (236)
T 3e8x_A           19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPE----LRE-----RGASDIVVANLE--EDFSHAF--ASI   85 (236)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHH----HHH-----TTCSEEEECCTT--SCCGGGG--TTC
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHH----HHh-----CCCceEEEcccH--HHHHHHH--cCC
Confidence            334899999999999999999999999999999986543322    111     357 89999999  6677777  689


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHH
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKM  226 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~  226 (296)
                      |+||||||...    .+++...+++|+.++.++++++++.+.++||++||.+.+..       +..+ .+.+.|+.+|.+
T Consensus        86 D~vi~~ag~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~-------~~~~-~~~~~Y~~sK~~  153 (236)
T 3e8x_A           86 DAVVFAAGSGP----HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP-------DQGP-MNMRHYLVAKRL  153 (236)
T ss_dssp             SEEEECCCCCT----TSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG-------GGSC-GGGHHHHHHHHH
T ss_pred             CEEEECCCCCC----CCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC-------CCCh-hhhhhHHHHHHH
Confidence            99999999754    24678899999999999999999999999999999555421       1111 457899999999


Q ss_pred             HHHHHHHhhhcCCCcEEEEecCeeecCCCCC
Q 022471          227 AEDIILDFSKNSDMAVMILRYFNVIGSDPEG  257 (296)
Q Consensus       227 ~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~  257 (296)
                      +|.+++    +.|++++++|||++||+....
T Consensus       154 ~e~~~~----~~gi~~~~lrpg~v~~~~~~~  180 (236)
T 3e8x_A          154 ADDELK----RSSLDYTIVRPGPLSNEESTG  180 (236)
T ss_dssp             HHHHHH----HSSSEEEEEEECSEECSCCCS
T ss_pred             HHHHHH----HCCCCEEEEeCCcccCCCCCC
Confidence            999887    389999999999999997543

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.95  E-value=1.3e-27  Score=205.21  Aligned_cols=172  Identities=14%  Similarity=0.116  Sum_probs=137.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-------eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE  143 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~  143 (296)
                      |+||||||+||||++++++|+++|+       +|++++|+....+...+.+.   ..+.++.++.+|++|.+++++++++
T Consensus         3 k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~v~~~~~~   79 (244)
T 2bd0_A            3 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECR---AEGALTDTITADISDMADVRRLTTH   79 (244)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHH---TTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHH---ccCCeeeEEEecCCCHHHHHHHHHH
Confidence            8899999999999999999999999       99999986543333333332   2245788999999999999988864


Q ss_pred             -----CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCC
Q 022471          144 -----NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITE  210 (296)
Q Consensus       144 -----~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e  210 (296)
                           +++|+||||||......    ..+..+..+++|+.++..+++++    ++.+.++||++||...+.         
T Consensus        80 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~---------  150 (244)
T 2bd0_A           80 IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATK---------  150 (244)
T ss_dssp             HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS---------
T ss_pred             HHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcC---------
Confidence                 58999999999865432    33455667889999977766554    456678999999988762         


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCCC
Q 022471          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       211 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~~  256 (296)
                        +.++...|+.||++.+.+++.++.+   +|+++++++||+|++|...
T Consensus       151 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  197 (244)
T 2bd0_A          151 --AFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWG  197 (244)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTC
T ss_pred             --CCCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhh
Confidence              3445789999999999999998875   7899999999999998643

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.95  E-value=2.4e-27  Score=204.87  Aligned_cols=173  Identities=14%  Similarity=0.139  Sum_probs=136.9

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccC--CCHHHHHHHhhc---
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL--GDAKAVNKFFSE---  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl--~d~~~v~~~~~~---  143 (296)
                      .+|++|||||+||||++++++|+++|++|++++|+....++..+.+....  +.++.++.+|+  +|.+++++++++   
T Consensus        11 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (252)
T 3f1l_A           11 NDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET--GRQPQWFILDLLTCTSENCQQLAQRIAV   88 (252)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--SCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc--CCCceEEEEecccCCHHHHHHHHHHHHH
Confidence            34999999999999999999999999999999987655555555544332  23678899999  999998888765   


Q ss_pred             --CCCcEEEEcccccCc-CC----CCcChHHHHHHHHHHHHHHHHH----HHHcCCCEEEEEcccccccCCCCCCCCCCC
Q 022471          144 --NAFDAVMHFAAVAYV-GE----STLDPLKYYHNITSNTLVVLES----MARHGVDTLIYSSTCATYGEPEKMPITEET  212 (296)
Q Consensus       144 --~~~D~vi~~Ag~~~~-~~----~~~~~~~~~~~n~~~t~~ll~~----~~~~~~~riV~~SS~~~~g~~~~~~~~e~~  212 (296)
                        +++|+||||||+... .+    ..+.++..+++|+.++..++++    |++.+.++||++||...+           .
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~-----------~  157 (252)
T 3f1l_A           89 NYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGR-----------Q  157 (252)
T ss_dssp             HCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGT-----------S
T ss_pred             hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhc-----------c
Confidence              689999999997432 22    3334456788999996665544    466777899999998775           2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhcC--CCcEEEEecCeeecCC
Q 022471          213 PQAPINPYGKAKKMAEDIILDFSKNS--DMAVMILRYFNVIGSD  254 (296)
Q Consensus       213 ~~~~~~~Y~~sK~~~e~~~~~~~~~~--gi~~~~lrpg~v~Gp~  254 (296)
                      +.++...|+.||++.+.+++.++.|.  .|++++|+||.|.++.
T Consensus       158 ~~~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~  201 (252)
T 3f1l_A          158 GRANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAM  201 (252)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHH
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCch
Confidence            34457899999999999999999884  3999999999997753

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.95  E-value=1.8e-27  Score=208.47  Aligned_cols=170  Identities=19%  Similarity=0.167  Sum_probs=134.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+|+||||+||||++++++|+++|++|++++|+....++..+.+   ... .++.++.+|++|.+++++++++     +
T Consensus        29 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l---~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (276)
T 2b4q_A           29 GRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRL---SAY-GDCQAIPADLSSEAGARRLAQALGELSA  104 (276)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---TTS-SCEEECCCCTTSHHHHHHHHHHHHHHCS
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---Hhc-CceEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            489999999999999999999999999999997654333333332   222 3688899999999999888865     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHH----HHHHHHHcCC----CEEEEEcccccccCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLV----VLESMARHGV----DTLIYSSTCATYGEPEKMPITEET  212 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~~----~riV~~SS~~~~g~~~~~~~~e~~  212 (296)
                      ++|+||||||+.....    ..++++..+++|+.++..    +++.|++.+.    ++||++||.+.+.           
T Consensus       105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~-----------  173 (276)
T 2b4q_A          105 RLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGIS-----------  173 (276)
T ss_dssp             CCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTC-----------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcC-----------
Confidence            8999999999765432    334456788999999754    5556666665    7999999988762           


Q ss_pred             CCCCCC-hHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          213 PQAPIN-PYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       213 ~~~~~~-~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +.++.. .|+.||++.+.+++.++.|   .|+++++|+||.|.++.
T Consensus       174 ~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~  219 (276)
T 2b4q_A          174 AMGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRM  219 (276)
T ss_dssp             CCCCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTT
T ss_pred             CCCCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcc
Confidence            222345 8999999999999999987   69999999999999875

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.95  E-value=2.6e-27  Score=206.09  Aligned_cols=174  Identities=17%  Similarity=0.109  Sum_probs=138.4

Q ss_pred             CCccEEEEEcCCC-hhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc---
Q 022471           68 EGVTHVLVTGGAG-YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (296)
Q Consensus        68 ~~~k~vlVTGasG-~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (296)
                      ..+|+||||||+| |||++++++|+++|++|++++|+....++..+.+++..  +.++.++.+|++|.+++++++++   
T Consensus        20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (266)
T 3o38_A           20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG--LGRVEAVVCDVTSTEAVDALITQTVE   97 (266)
T ss_dssp             TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC--SSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC--CCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            3449999999986 89999999999999999999987655555555443321  35799999999999999988865   


Q ss_pred             --CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHH----Hc-CCCEEEEEcccccccCCCCCCCCCCC
Q 022471          144 --NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMA----RH-GVDTLIYSSTCATYGEPEKMPITEET  212 (296)
Q Consensus       144 --~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~----~~-~~~riV~~SS~~~~g~~~~~~~~e~~  212 (296)
                        +++|+||||||+.....    ..++.+..+++|+.++.++++++.    +. +.++||++||...+           .
T Consensus        98 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~-----------~  166 (266)
T 3o38_A           98 KAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGW-----------R  166 (266)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGT-----------C
T ss_pred             HhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHc-----------C
Confidence              68999999999865443    334455678899999777665554    33 55789999998776           3


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       213 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +.++...|+.||++.+.+++.++.+   .|+++++|+||.|.++.
T Consensus       167 ~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  211 (266)
T 3o38_A          167 AQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKF  211 (266)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchh
Confidence            4456789999999999999999988   79999999999999875

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.95  E-value=2.7e-27  Score=206.66  Aligned_cols=172  Identities=17%  Similarity=0.166  Sum_probs=138.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC-CcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR-GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      +|++|||||+||||++++++|+++|++|++++++.. ..++..+.++.   .+.++.++.+|++|.+++++++++     
T Consensus        18 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   94 (270)
T 3is3_A           18 GKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKA---LGSDAIAIKADIRQVPEIVKLFDQAVAHF   94 (270)
T ss_dssp             TCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH---TTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh---cCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            499999999999999999999999999999886432 22233333333   246789999999999999988865     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARHG--VDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~~--~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +++|+||||||+.....    ..++++..+++|+.++..+++++.+.-  .++||++||....          ..+.++.
T Consensus        95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~----------~~~~~~~  164 (270)
T 3is3_A           95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSK----------DFSVPKH  164 (270)
T ss_dssp             SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTT----------TCCCTTC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhc----------cCCCCCC
Confidence            68999999999865443    444556678999999888888777652  3599999996632          1234567


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..|+.||++.+.+++.++.|   +||++++|+||.|.++.
T Consensus       165 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~  204 (270)
T 3is3_A          165 SLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDM  204 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTT
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChh
Confidence            89999999999999999988   69999999999999875

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.95  E-value=8.3e-28  Score=211.15  Aligned_cols=174  Identities=17%  Similarity=0.148  Sum_probs=136.3

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|++|||||+||||++++++|+++|++|++++|+....++..+.+....  +..+.++++|++|.+++++++++     
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  109 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT--GNIVRAVVCDVGDPDQVAALFAAVRAEF  109 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--SSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            34999999999999999999999999999999987655555554444332  12358899999999999988865     


Q ss_pred             CCCcEEEEcccccCc-C----CCCcChHHHHHHHHHHHHH----HHHHHHHcC--CCEEEEEcccccccCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYV-G----ESTLDPLKYYHNITSNTLV----VLESMARHG--VDTLIYSSTCATYGEPEKMPITEET  212 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~-~----~~~~~~~~~~~~n~~~t~~----ll~~~~~~~--~~riV~~SS~~~~g~~~~~~~~e~~  212 (296)
                      +++|+||||||.... .    ...++.++.+++|+.++..    +++.|++.+  .++||++||...+           .
T Consensus       110 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~-----------~  178 (281)
T 4dry_A          110 ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQ-----------T  178 (281)
T ss_dssp             SCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGT-----------C
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhC-----------C
Confidence            689999999997543 2    2344556688999999544    556666654  5799999998775           3


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       213 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      +.++...|+.||++.+.+++.++.|   +||++++|+||.|.++..
T Consensus       179 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  224 (281)
T 4dry_A          179 PRPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMT  224 (281)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC---
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhh
Confidence            4456789999999999999999987   799999999999988753

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.95  E-value=2.7e-27  Score=207.93  Aligned_cols=172  Identities=16%  Similarity=0.153  Sum_probs=137.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-cchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG-NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      +|++|||||+||||++++++|+++|++|++++|+... .+...+.+++.   +.++.++.+|++|.+++++++++     
T Consensus        29 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~  105 (283)
T 1g0o_A           29 GKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN---GSDAACVKANVGVVEDIVRMFEEAVKIF  105 (283)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh---CCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4899999999999999999999999999999986432 12222333322   35788999999999999888764     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +++|+||||||+.....    ..++.+..+++|+.++.++++++.+.  +.++||++||...+..          ...+.
T Consensus       106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~----------~~~~~  175 (283)
T 1g0o_A          106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAK----------AVPKH  175 (283)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCS----------SCSSC
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccC----------CCCCC
Confidence            68999999999865432    34455668899999999999888775  5679999999876521          11236


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..|+.||++.+.+++.++.|   +|+++++|+||.|.++.
T Consensus       176 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  215 (283)
T 1g0o_A          176 AVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDM  215 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHH
T ss_pred             cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchh
Confidence            78999999999999999977   68999999999999873

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.95  E-value=1.6e-27  Score=220.97  Aligned_cols=203  Identities=18%  Similarity=0.182  Sum_probs=148.4

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcc---hhhhhhhhhCC------CCCceEEEEccCCCHHHHHH
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNI---GAVKVLQELFP------EPGRLQFIYADLGDAKAVNK  139 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~---~~~~~~~~~~~------~~~~~~~~~~Dl~d~~~v~~  139 (296)
                      .+|+||||||+|+||++++++|+++|++|++++|+.....   ...+.++....      ...++.++.+|++|.+++. 
T Consensus        68 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-  146 (427)
T 4f6c_A           68 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-  146 (427)
T ss_dssp             CCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC-
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC-
Confidence            4589999999999999999999999999999998765222   22222222110      1257899999999988877 


Q ss_pred             HhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccC-----CCCCCCCCCCC-
Q 022471          140 FFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGE-----PEKMPITEETP-  213 (296)
Q Consensus       140 ~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~-----~~~~~~~e~~~-  213 (296)
                      .+  .++|+||||||....   ..++...+++|+.++.++++++.+ +.++||++||.++ |.     ....+++|+.+ 
T Consensus       147 ~~--~~~d~Vih~A~~~~~---~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~  219 (427)
T 4f6c_A          147 LP--ENMDTIIHAGARTDH---FGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADVY  219 (427)
T ss_dssp             CS--SCCSEEEECCCCC----------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG-GSEECSSCSCCEECTTCSC
T ss_pred             Cc--CCCCEEEECCcccCC---CCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh-CCCccCCCCCccccccccc
Confidence            33  789999999997643   345677899999999999999999 7789999999988 43     23446777766 


Q ss_pred             --CCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          214 --QAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       214 --~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                        ..+.+.|+.||+++|.+++.+++ .|++++++|||+||||.....+.....      ..+++.+++.+..+.+
T Consensus       220 ~~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg~v~G~~~~~~~~~~~~------~~~~~~~~~~~~~~~~  287 (427)
T 4f6c_A          220 KGQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIK------TNRFSMVMNDLLQLDC  287 (427)
T ss_dssp             SSCCCCSHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCEESCSSSCCCCTTGG------GCHHHHHHHHHHHSSE
T ss_pred             cCCCCCCchHHHHHHHHHHHHHHHH-cCCCEEEEeCCeeecCCCCCccccCcc------hHHHHHHHHHHHhcCC
Confidence              45789999999999999999865 799999999999999986543221111      1456666666655443

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.95  E-value=4.4e-27  Score=205.49  Aligned_cols=173  Identities=20%  Similarity=0.180  Sum_probs=138.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC-CcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR-GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      +|++|||||+||||++++++|+++|++|++++++.. ..++..+.+++   .+.++.++.+|++|.+++++++++     
T Consensus        31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  107 (271)
T 3v2g_A           31 GKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQ---AGGRAVAIRADNRDAEAIEQAIRETVEAL  107 (271)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh---cCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            399999999999999999999999999999976432 22233333332   246788999999999999988865     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +++|+||||||+.....    ..+++++.+++|+.++..+++++.+.  ..++||++||.....          .+.++.
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~----------~~~~~~  177 (271)
T 3v2g_A          108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAEL----------VPWPGI  177 (271)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTC----------CCSTTC
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhcc----------CCCCCc
Confidence            68999999999865443    34455667889999998888887765  357999999965431          224457


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      ..|+.||++.+.+++.++.|   .||++++|+||.|.++..
T Consensus       178 ~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~  218 (271)
T 3v2g_A          178 SLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMN  218 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSS
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcc
Confidence            89999999999999999988   589999999999999864

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.95  E-value=1.6e-27  Score=213.07  Aligned_cols=173  Identities=15%  Similarity=0.063  Sum_probs=136.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+||||||+||||++++++|+++|++|++++|+..+.++..+.++.... +.++.++.+|++|.+++++++++     +
T Consensus         8 ~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (319)
T 3ioy_A            8 GRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGS-GPEVMGVQLDVASREGFKMAADEVEARFG   86 (319)
T ss_dssp             TCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC-GGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            48999999999999999999999999999999876655555555544321 23789999999999999988865     6


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHH----HHHc------CCCEEEEEcccccccCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLES----MARH------GVDTLIYSSTCATYGEPEKMPITE  210 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~----~~~~------~~~riV~~SS~~~~g~~~~~~~~e  210 (296)
                      ++|+||||||+....+    ..++.+..+++|+.|+.+++++    +.++      +.++||++||.+.+.         
T Consensus        87 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~---------  157 (319)
T 3ioy_A           87 PVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFL---------  157 (319)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTC---------
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEeccccccc---------
Confidence            8999999999865443    3344566889999997775554    4443      357999999988763         


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       211 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                        +.+....|+.||++.+.+++.++.+   .|+++++|+||.|.++.
T Consensus       158 --~~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  202 (319)
T 3ioy_A          158 --AAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYI  202 (319)
T ss_dssp             --CCSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC---
T ss_pred             --CCCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCc
Confidence              3344678999999999999999876   68999999999999875

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.95  E-value=1.5e-27  Score=204.60  Aligned_cols=166  Identities=16%  Similarity=0.161  Sum_probs=132.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-CCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~v  149 (296)
                      |+||||||+||||++++++|+++|++|++++|+....+   +..++.    .++.++.+|++|.+++++++++ +++|+|
T Consensus         8 ~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~---~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~id~v   80 (244)
T 1cyd_A            8 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLV---SLAKEC----PGIEPVCVDLGDWDATEKALGGIGPVDLL   80 (244)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---HHHHHS----TTCEEEECCTTCHHHHHHHHTTCCCCSEE
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH---HHHHhc----cCCCcEEecCCCHHHHHHHHHHcCCCCEE
Confidence            89999999999999999999999999999997643222   222221    3466779999999999999875 479999


Q ss_pred             EEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHH----HcC-CCEEEEEcccccccCCCCCCCCCCCCCCCCChH
Q 022471          150 MHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMA----RHG-VDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (296)
Q Consensus       150 i~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~----~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (296)
                      |||||......    ..+..+..+++|+.++.++++++.    +.+ .++||++||...+.           +.++...|
T Consensus        81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~Y  149 (244)
T 1cyd_A           81 VNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV-----------TFPNLITY  149 (244)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS-----------CCTTBHHH
T ss_pred             EECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcC-----------CCCCcchh
Confidence            99999765432    334456688899999777665554    445 67999999988773           23346789


Q ss_pred             HHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          221 GKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       221 ~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +.||++.+.+++.++.+   .|+++++++||.|+++.
T Consensus       150 ~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~  186 (244)
T 1cyd_A          150 SSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDM  186 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcc
Confidence            99999999999999887   68999999999999975

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.95  E-value=1.4e-27  Score=205.50  Aligned_cols=167  Identities=16%  Similarity=0.125  Sum_probs=131.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-CCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~  148 (296)
                      +|+++||||+||||++++++|+++|++|++++|+..+.++    +.+.    .++.++.+|++|.++++++.++ +++|+
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~----~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~id~   77 (246)
T 2ag5_A            6 GKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQE----LEKY----PGIQTRVLDVTKKKQIDQFANEVERLDV   77 (246)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGG----GGGS----TTEEEEECCTTCHHHHHHHHHHCSCCSE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH----HHhc----cCceEEEeeCCCHHHHHHHHHHhCCCCE
Confidence            3899999999999999999999999999999976432221    1111    3688899999999999987765 68999


Q ss_pred             EEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHH----HHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChH
Q 022471          149 VMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLES----MARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (296)
Q Consensus       149 vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~----~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (296)
                      ||||||......    ..++.+..+++|+.++.+++++    |++.+.++||++||.+.+...          ..+...|
T Consensus        78 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~~Y  147 (246)
T 2ag5_A           78 LFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKG----------VVNRCVY  147 (246)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC----------CTTBHHH
T ss_pred             EEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCC----------CCCCccH
Confidence            999999865433    2334456788999997665554    555677899999998765211          1146789


Q ss_pred             HHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          221 GKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       221 ~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +.||++.+.+++.++.|   +|+++++|+||+|++|.
T Consensus       148 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  184 (246)
T 2ag5_A          148 STTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPS  184 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcc
Confidence            99999999999999987   59999999999999974

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.95  E-value=1.9e-27  Score=212.89  Aligned_cols=174  Identities=18%  Similarity=0.180  Sum_probs=133.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC-Ccchhhhhhhh-hCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR-GNIGAVKVLQE-LFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      |+||||||+||||++++++|+++|++|++.+|+.. ...+..+.+.+ ....+.++.++.+|++|.+++++++++     
T Consensus         6 k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~   85 (324)
T 3u9l_A            6 KIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGED   85 (324)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            89999999999999999999999999999988632 22222222221 111235789999999999999988865     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +++|+||||||+....+    ..++....+++|+.|+.++++++    ++.+.++||++||.+.+..          +.+
T Consensus        86 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~----------~~~  155 (324)
T 3u9l_A           86 GRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGG----------TPP  155 (324)
T ss_dssp             SCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------CCS
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccC----------CCC
Confidence            58999999999865443    33444567899999977765554    7777889999999877621          123


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..+.|++||++.+.+++.++.|   +||++++|+||.|.++.
T Consensus       156 ~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~  197 (324)
T 3u9l_A          156 YLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGT  197 (324)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC----
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCc
Confidence            3678999999999999999988   79999999999998764

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.95  E-value=3.3e-27  Score=204.45  Aligned_cols=165  Identities=18%  Similarity=0.209  Sum_probs=131.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||++++++|+++|++|++++|+... ++..+   ++    .+ .++++|++|.+++++++++     +
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~---~~----~~-~~~~~D~~~~~~~~~~~~~~~~~~g   76 (256)
T 2d1y_A            6 GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAE---AI----GG-AFFQVDLEDERERVRFVEEAAYALG   76 (256)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHH---HH----TC-EEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHH---Hh----hC-CEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999987544 32222   22    13 7889999999999888765     6


Q ss_pred             CCcEEEEcccccCcCCC----CcChHHHHHHHHHHHHHHHH----HHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGES----TLDPLKYYHNITSNTLVVLE----SMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~----~~~~~~~~~~n~~~t~~ll~----~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||.......    .++.++.+++|+.++.++++    .|++.+.++||++||.+.+.           +.++
T Consensus        77 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~~  145 (256)
T 2d1y_A           77 RVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF-----------AEQE  145 (256)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS-----------BCTT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccC-----------CCCC
Confidence            89999999998654332    23445678899999777655    44556678999999987652           2344


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.||++.+.+++.++.|   .|+++++++||.+.++.
T Consensus       146 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  186 (256)
T 2d1y_A          146 NAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEA  186 (256)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCch
Confidence            678999999999999999987   58999999999998763

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.95  E-value=1.3e-27  Score=209.80  Aligned_cols=172  Identities=17%  Similarity=0.151  Sum_probs=127.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC-CCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      +|++|||||+||||++++++|+++|++|++++|+. ...++..+.+..   .+.++.++++|++|.+++++++++     
T Consensus        29 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  105 (280)
T 4da9_A           29 RPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSG---LGARVIFLRADLADLSSHQATVDAVVAEF  105 (280)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHH---TTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHh---cCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            48999999999999999999999999999998633 222222333322   246789999999999998888865     


Q ss_pred             CCCcEEEEccccc--CcCC----CCcChHHHHHHHHHHHHH----HHHHHHHcC---CCEEEEEcccccccCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVA--YVGE----STLDPLKYYHNITSNTLV----VLESMARHG---VDTLIYSSTCATYGEPEKMPITE  210 (296)
Q Consensus       144 ~~~D~vi~~Ag~~--~~~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~---~~riV~~SS~~~~g~~~~~~~~e  210 (296)
                      +++|+||||||+.  ...+    ..++++..+++|+.++..    +++.|++.+   .++||++||.+.+          
T Consensus       106 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~----------  175 (280)
T 4da9_A          106 GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAV----------  175 (280)
T ss_dssp             SCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------------
T ss_pred             CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhc----------
Confidence            6899999999983  2222    344555677899999765    445555544   5699999998765          


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       211 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                       .+.++...|+.||++.+.+++.++.|   +||++++|+||.|.++..
T Consensus       176 -~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  222 (280)
T 4da9_A          176 -MTSPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMT  222 (280)
T ss_dssp             -----CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---
T ss_pred             -cCCCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCch
Confidence             23445678999999999999999988   789999999999998863

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.95  E-value=2.3e-27  Score=209.65  Aligned_cols=172  Identities=16%  Similarity=0.139  Sum_probs=137.8

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC--CcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc---
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR--GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (296)
                      .+|++|||||+||||++++++|+++|++|++++|+..  ..+...+.+++   .+.++.++.+|++|.+++++++++   
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~  124 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEE---CGRKAVLLPGDLSDESFARSLVHKARE  124 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHH---TTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHH---cCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            3499999999999999999999999999999987522  12222222222   246788999999999999888765   


Q ss_pred             --CCCcEEEEcccccCc-CC----CCcChHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          144 --NAFDAVMHFAAVAYV-GE----STLDPLKYYHNITSNTLVVLESMARHG--VDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       144 --~~~D~vi~~Ag~~~~-~~----~~~~~~~~~~~n~~~t~~ll~~~~~~~--~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                        +++|+||||||.... ..    ..++++..+++|+.++.++++++.+.-  .++||++||...+.           +.
T Consensus       125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~-----------~~  193 (294)
T 3r3s_A          125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQ-----------PS  193 (294)
T ss_dssp             HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTS-----------CC
T ss_pred             HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhcc-----------CC
Confidence              689999999997542 22    344556788999999999998887653  35999999988873           34


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ++...|+.||++.+.+++.++.|   .||++++|+||.|+++.
T Consensus       194 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  236 (294)
T 3r3s_A          194 PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL  236 (294)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCcccc
Confidence            45788999999999999999988   59999999999999864

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.95  E-value=2.1e-27  Score=206.34  Aligned_cols=168  Identities=15%  Similarity=0.081  Sum_probs=132.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+||||||+||||++++++|+++|++|++++|+....++   ..+++   ..++.++.+|++|.+++++++++     +
T Consensus        12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---~~~~~---~~~~~~~~~D~~d~~~v~~~~~~~~~~~g   85 (263)
T 3ak4_A           12 GRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQA---VVAGL---ENGGFAVEVDVTKRASVDAAMQKAIDALG   85 (263)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---HHHTC---TTCCEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH---HHHHH---hcCCeEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999986433222   22222   12678899999999999988864     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHH----HHHcC-CCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLES----MARHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~----~~~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||.....+    ..++++..+++|+.++..++++    |++.+ .++||++||...+.           +.+
T Consensus        86 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  154 (263)
T 3ak4_A           86 GFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKV-----------GAP  154 (263)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS-----------CCT
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccc-----------CCC
Confidence            8999999999765433    3334566788999987665544    44555 68999999987752           234


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.||++.+.+++.++.|   .|+++++|+||.|+++.
T Consensus       155 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  196 (263)
T 3ak4_A          155 LLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAM  196 (263)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChh
Confidence            5679999999999999999887   59999999999999874

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.95  E-value=2.6e-27  Score=204.42  Aligned_cols=170  Identities=15%  Similarity=0.103  Sum_probs=133.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCce-EEEEccCCCHHHHHHHhhc----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRL-QFIYADLGDAKAVNKFFSE----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~d~~~v~~~~~~----~  144 (296)
                      +|+|+||||+||||++++++|+++|++|++++|+..+.++..+   ++   +.++ .++.+|++|.+++++++++    +
T Consensus        11 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~---~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (254)
T 2wsb_A           11 GACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQ---EL---GAAVAARIVADVTDAEAMTAAAAEAEAVA   84 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HH---GGGEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---Hh---cccceeEEEEecCCHHHHHHHHHHHHhhC
Confidence            3899999999999999999999999999999986543332222   22   2356 8899999999999988764    6


Q ss_pred             CCcEEEEcccccCcCCCC----cChHHHHHHHHHHHH----HHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~~----~~~~~~~~~n~~~t~----~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||........    +..++.+++|+.++.    .+++.+++.+.++||++||...+...         +..+
T Consensus        85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------~~~~  155 (254)
T 2wsb_A           85 PVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN---------RPQF  155 (254)
T ss_dssp             CCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------SSSC
T ss_pred             CCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC---------CCCc
Confidence            899999999986544322    334567889999944    45566667777899999998876321         1223


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      .+.|+.||++.+.+++.++.+   .|+++++++||.++++.
T Consensus       156 ~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~  196 (254)
T 2wsb_A          156 ASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEM  196 (254)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchh
Confidence            478999999999999999887   49999999999999974

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.95  E-value=1.1e-27  Score=205.95  Aligned_cols=172  Identities=16%  Similarity=0.117  Sum_probs=136.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+|+||||+||||++++++|+++|++|++++|+....++..+.+.+..  +.++.++.+|++|.+++++++++     ++
T Consensus         8 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (248)
T 2pnf_A            8 KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKY--GVKAHGVEMNLLSEESINKAFEEIYNLVDG   85 (248)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH--CCCEEEEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhc--CCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            899999999999999999999999999999986544333333333211  35688999999999999988864     58


Q ss_pred             CcEEEEcccccCcCC----CCcChHHHHHHHHHHH----HHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGE----STLDPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t----~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +|+||||||......    ..++.++.+++|+.++    +.+++.|++.+.++||++||...+.           +.++.
T Consensus        86 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~  154 (248)
T 2pnf_A           86 IDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFT-----------GNVGQ  154 (248)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHH-----------CCTTC
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcC-----------CCCCC
Confidence            999999999765432    3344566889999998    4456666677778999999976542           12346


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      ..|+.||.+.+.+++.++.+   .|+++++++||.++++..
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~  195 (248)
T 2pnf_A          155 VNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMT  195 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGG
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchh
Confidence            78999999999999999877   589999999999999853

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.95  E-value=2.8e-27  Score=206.84  Aligned_cols=173  Identities=15%  Similarity=0.206  Sum_probs=136.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+||||||+||||++++++|+++|++|++++|+....++.   .+++.. ..++.++.+|++|.+++++++++     +
T Consensus        16 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   91 (278)
T 2bgk_A           16 DKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKV---CNNIGS-PDVISFVHCDVTKDEDVRNLVDTTIAKHG   91 (278)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHH---HHHhCC-CCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999998754332222   222222 23789999999999999988864     5


Q ss_pred             CCcEEEEcccccCcC------CCCcChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVG------ESTLDPLKYYHNITSNTLVVLESMAR----HGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~------~~~~~~~~~~~~n~~~t~~ll~~~~~----~~~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                      ++|+||||||.....      ...+...+.+++|+.++.++++++.+    .+.++||++||..+|....          
T Consensus        92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------  161 (278)
T 2bgk_A           92 KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE----------  161 (278)
T ss_dssp             CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT----------
T ss_pred             CCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCC----------
Confidence            899999999975421      12244566888999998877766654    4678999999988873211          


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~~  256 (296)
                      .+...|+.||.+.+.+++.++.+   +|+++++++||+|+|+...
T Consensus       162 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (278)
T 2bgk_A          162 GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLT  206 (278)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCT
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhh
Confidence            14678999999999999999877   6999999999999998743

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.95  E-value=4.2e-27  Score=206.98  Aligned_cols=171  Identities=13%  Similarity=0.044  Sum_probs=136.6

Q ss_pred             ccEEEEEcCC--ChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----
Q 022471           70 VTHVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (296)
Q Consensus        70 ~k~vlVTGas--G~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (296)
                      +|+||||||+  ||||++++++|+++|++|++++|+.. ..+..+.+.+..   ..+.++.+|++|.+++++++++    
T Consensus        21 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (285)
T 2p91_A           21 GKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGF---GSDLVVKCDVSLDEDIKNLKKFLEEN   96 (285)
T ss_dssp             TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHT---TCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhc---CCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4899999999  99999999999999999999998653 222333333322   2377899999999999888865    


Q ss_pred             -CCCcEEEEcccccCc--------CCCCcChHHHHHHHHHHHHHHHHHHHHc---CCCEEEEEcccccccCCCCCCCCCC
Q 022471          144 -NAFDAVMHFAAVAYV--------GESTLDPLKYYHNITSNTLVVLESMARH---GVDTLIYSSTCATYGEPEKMPITEE  211 (296)
Q Consensus       144 -~~~D~vi~~Ag~~~~--------~~~~~~~~~~~~~n~~~t~~ll~~~~~~---~~~riV~~SS~~~~g~~~~~~~~e~  211 (296)
                       +++|+||||||+...        ....++.+..+++|+.++.++++++.+.   ..++||++||.+.+.          
T Consensus        97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~----------  166 (285)
T 2p91_A           97 WGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEK----------  166 (285)
T ss_dssp             TSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTS----------
T ss_pred             cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhcc----------
Confidence             589999999997643        1233445668899999999988887654   237999999977652          


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       212 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                       +.++...|+.||++.+.+++.++.+   .|+++++|+||.|++|..
T Consensus       167 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  212 (285)
T 2p91_A          167 -VVPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAA  212 (285)
T ss_dssp             -BCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC
T ss_pred             -CCCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchh
Confidence             2345678999999999999999987   599999999999999864

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.95  E-value=2.3e-27  Score=207.26  Aligned_cols=202  Identities=12%  Similarity=0.045  Sum_probs=150.0

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|+||||||+||||++++++|+++|++|++++|+....++..+.+++.   +.++.++.+|++|.+++++++++     
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  106 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL---GAKVHTFVVDCSNREDIYSSAKKVKAEI  106 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc---CCeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence            3489999999999999999999999999999998654444444444332   35789999999999999888764     


Q ss_pred             CCCcEEEEcccccCcCCC----CcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGES----TLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~~----~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +++|+||||||.......    .+.....+++|+.++..    +++.|++.+.++||++||...+.           +.+
T Consensus       107 g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~  175 (272)
T 1yb1_A          107 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV-----------SVP  175 (272)
T ss_dssp             CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CC-----------CHH
T ss_pred             CCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcC-----------CCC
Confidence            589999999998654432    23345678899999555    55666667778999999987762           223


Q ss_pred             CCChHHHHHHHHHHHHHHhhhcC------CCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKNS------DMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~~------gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      +...|+.||++.+.+++.++.+.      |+++++|+||.|.++.......  ..........+...++..+..+++
T Consensus       176 ~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~dva~~i~~~~~~~~~  250 (272)
T 1yb1_A          176 FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPST--SLGPTLEPEEVVNRLMHGILTEQK  250 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTHH--HHCCCCCHHHHHHHHHHHHHTTCS
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccccc--cccCCCCHHHHHHHHHHHHHcCCC
Confidence            45789999999999999998763      8999999999999886321100  000011122677788888887776

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.95  E-value=1.5e-27  Score=209.76  Aligned_cols=172  Identities=12%  Similarity=0.069  Sum_probs=134.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+|+||||+||||++++++|+++|++|++++|+....++..+.++.   .+.++.++.+|++|.+++++++++     +
T Consensus        44 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~  120 (285)
T 2c07_A           44 NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKS---FGYESSGYAGDVSKKEEISEVINKILTEHK  120 (285)
T ss_dssp             SCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHT---TTCCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHh---cCCceeEEECCCCCHHHHHHHHHHHHHhcC
Confidence            48999999999999999999999999999988754433333333332   245788999999999999988864     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||......    ..+..+..+++|+.++.+    +++.|++.+.++||++||...+.           +.++
T Consensus       121 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~  189 (285)
T 2c07_A          121 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLT-----------GNVG  189 (285)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH-----------CCTT
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhcc-----------CCCC
Confidence            8999999999865432    334456678899999554    55555566778999999987652           2234


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      ...|+.||.+.+.+++.++.+   .|+++++++||.|+++..
T Consensus       190 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  231 (285)
T 2c07_A          190 QANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMT  231 (285)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC---
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCch
Confidence            678999999999999999877   589999999999998853

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.95  E-value=2.4e-27  Score=205.47  Aligned_cols=171  Identities=13%  Similarity=0.095  Sum_probs=135.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEec-CCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN-LSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      +|+||||||+||||++++++|+++|++|++++| +....++..+.++..   +.++.++.+|++|.+++++++++     
T Consensus         7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (261)
T 1gee_A            7 GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV---GGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc---CCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            389999999999999999999999999999998 433333333333322   35788999999999999888764     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHH----HHHHHcC-CCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVL----ESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll----~~~~~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                      +++|+||||||......    ..++.++.+++|+.++..++    +.+++.+ .++||++||...+           .+.
T Consensus        84 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~-----------~~~  152 (261)
T 1gee_A           84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEK-----------IPW  152 (261)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGT-----------SCC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhc-----------CCC
Confidence            58999999999765432    33445567889999976654    4455555 6799999997765           344


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ++...|+.||++.+.+++.++.+   .|+++++++||.|+++.
T Consensus       153 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  195 (261)
T 1gee_A          153 PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPI  195 (261)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGG
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCch
Confidence            56789999999999999999877   58999999999999985

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.95  E-value=4.6e-28  Score=204.75  Aligned_cols=186  Identities=11%  Similarity=0.133  Sum_probs=143.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC-HHHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~D~v  149 (296)
                      |+|+||||+|+||++++++|+++|++|++++|+..+...           ..++.++.+|++| .+++.+++  .++|+|
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-----------~~~~~~~~~D~~d~~~~~~~~~--~~~d~v   67 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ-----------YNNVKAVHFDVDWTPEEMAKQL--HGMDAI   67 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC-----------CTTEEEEECCTTSCHHHHHTTT--TTCSEE
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh-----------cCCceEEEecccCCHHHHHHHH--cCCCEE
Confidence            479999999999999999999999999999986543221           1468999999999 99999999  579999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~  229 (296)
                      |||||....        +.+++|+.++.++++++++.+.++||++||.++++..   +..| .+..+.+.|+.+|.++|.
T Consensus        68 i~~ag~~~~--------~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~---~~~e-~~~~~~~~Y~~sK~~~e~  135 (219)
T 3dqp_A           68 INVSGSGGK--------SLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE---KWIG-AGFDALKDYYIAKHFADL  135 (219)
T ss_dssp             EECCCCTTS--------SCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGG---GCCS-HHHHHTHHHHHHHHHHHH
T ss_pred             EECCcCCCC--------CcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCC---cccc-cccccccHHHHHHHHHHH
Confidence            999997542        2567899999999999999999999999998777532   2233 344557899999999999


Q ss_pred             HHHHhhhcCCCcEEEEecCeeecCCCCCCCC--CCCCcccccccccHHHHHHHHhCCC
Q 022471          230 IILDFSKNSDMAVMILRYFNVIGSDPEGRLG--EAPRPELREHGRISGACFDAARGII  285 (296)
Q Consensus       230 ~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~  285 (296)
                      +++   ++.+++++++|||++||+...+.+.  ..... +-....+...+...+....
T Consensus       136 ~~~---~~~~i~~~ilrp~~v~g~~~~~~~~~~~~~~~-~i~~~Dva~~i~~~l~~~~  189 (219)
T 3dqp_A          136 YLT---KETNLDYTIIQPGALTEEEATGLIDINDEVSA-SNTIGDVADTIKELVMTDH  189 (219)
T ss_dssp             HHH---HSCCCEEEEEEECSEECSCCCSEEEESSSCCC-CEEHHHHHHHHHHHHTCGG
T ss_pred             HHH---hccCCcEEEEeCceEecCCCCCccccCCCcCC-cccHHHHHHHHHHHHhCcc
Confidence            986   4589999999999999987544321  11111 1111255666666665543

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.95  E-value=5.4e-27  Score=203.24  Aligned_cols=174  Identities=14%  Similarity=0.060  Sum_probs=137.6

Q ss_pred             CccEEEEEcCCC--hhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc---
Q 022471           69 GVTHVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (296)
Q Consensus        69 ~~k~vlVTGasG--~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (296)
                      .+|++|||||+|  |||+++|+.|+++|++|++++|+....+++.+.+++..  +.++.++++|++|.+++++++++   
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN--QPEAHLYQIDVQSDEEVINGFEQIGK   82 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGT--CSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            349999999876  99999999999999999999998776666666666542  24788999999999999888865   


Q ss_pred             --CCCcEEEEcccccCcCC----CCcC----hHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCC
Q 022471          144 --NAFDAVMHFAAVAYVGE----STLD----PLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEE  211 (296)
Q Consensus       144 --~~~D~vi~~Ag~~~~~~----~~~~----~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~  211 (296)
                        +++|++|||||+.....    ..+.    +...+++|+.++..+...+...  +.++||++||.+..           
T Consensus        83 ~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~-----------  151 (256)
T 4fs3_A           83 DVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGE-----------  151 (256)
T ss_dssp             HHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGT-----------
T ss_pred             HhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccc-----------
Confidence              89999999999754321    2222    2334567887776666655432  24699999997764           


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       212 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      .+.+....|+.||++.+.+++.++.|   +||+|++|.||.|..|..
T Consensus       152 ~~~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~  198 (256)
T 4fs3_A          152 FAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSA  198 (256)
T ss_dssp             SCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGG
T ss_pred             cCcccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhh
Confidence            34455789999999999999999988   799999999999988753

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.95  E-value=7.9e-28  Score=206.41  Aligned_cols=171  Identities=15%  Similarity=0.095  Sum_probs=134.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEE-ecCCCCcchhhhhhhhhCCCCCceEE-EEccCCCHHHHHHHhhc----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIV-DNLSRGNIGAVKVLQELFPEPGRLQF-IYADLGDAKAVNKFFSE----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~Dl~d~~~v~~~~~~----  143 (296)
                      ||+|+||||+||||++++++|+++|++|+++ +|+....++..+.++..   +.++.+ +.+|++|.+++++++++    
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRR---GSPLVAVLGANLLEAEAATALVHQAAEV   77 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHT---TCSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---CCceEEEEeccCCCHHHHHHHHHHHHHh
Confidence            4899999999999999999999999999998 66543333333333322   345666 89999999999888764    


Q ss_pred             -CCCcEEEEcccccCcCC----CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          144 -NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       144 -~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                       +++|+||||||......    ..+..+..+++|+.+    ++.+++.|++.+.++||++||...+.           +.
T Consensus        78 ~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~  146 (245)
T 2ph3_A           78 LGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGIL-----------GN  146 (245)
T ss_dssp             HTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH-----------CC
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhcc-----------CC
Confidence             68999999999765332    334456688999999    66677777777788999999976552           12


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ++...|+.||++.+.+++.++.+   .|+++++++||.++++.
T Consensus       147 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  189 (245)
T 2ph3_A          147 PGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEM  189 (245)
T ss_dssp             SSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcc
Confidence            34678999999999999999887   48999999999999875

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.95  E-value=6.8e-27  Score=199.72  Aligned_cols=174  Identities=16%  Similarity=0.094  Sum_probs=136.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      ||++|||||+||||++++++|+++|++|++++|+..+.++..+.+.+..  +.++.++.+|++|.+++++++++     +
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ--GVEVFYHHLDVSKAESVEEFSKKVLERFG   79 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--CCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc--CCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            4899999999999999999999999999999987655555444443222  35789999999999999998865     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHH---cCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMAR---HGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~---~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      ++|+||||||+.....    ..++.+..+++|+.++..+++++.+   .+.+++|++||...+           .+.+..
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~-----------~~~~~~  148 (235)
T 3l77_A           80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSA-----------RLIPYG  148 (235)
T ss_dssp             SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGS-----------SCCTTC
T ss_pred             CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhc-----------ccCCCc
Confidence            8999999999865544    3445566888999997776665543   234688888876654           223346


Q ss_pred             ChHHHHHHHHHHHHHHhhhc-CCCcEEEEecCeeecCCCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN-SDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~-~gi~~~~lrpg~v~Gp~~~  256 (296)
                      ..|+.||++.+.+++.++.+ .|+++++++||.|.++...
T Consensus       149 ~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~  188 (235)
T 3l77_A          149 GGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGG  188 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTT
T ss_pred             chHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCcccccccc
Confidence            78999999999999999665 6999999999999887643

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.95  E-value=1.6e-27  Score=206.85  Aligned_cols=174  Identities=17%  Similarity=0.103  Sum_probs=133.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCC----CCCceEEEEccCCCHHHHHHHhhc---
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP----EPGRLQFIYADLGDAKAVNKFFSE---  143 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (296)
                      |+|+||||+||||++++++|+++|++|++++|+....++..+.++....    ...++.++.+|++|.+++++++++   
T Consensus         8 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   87 (264)
T 2pd6_A            8 ALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQA   87 (264)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            8999999999999999999999999999999865433333322221100    014688999999999999888765   


Q ss_pred             --CCC-cEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHH----HcC-CCEEEEEcccccccCCCCCCCCCC
Q 022471          144 --NAF-DAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMA----RHG-VDTLIYSSTCATYGEPEKMPITEE  211 (296)
Q Consensus       144 --~~~-D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~----~~~-~~riV~~SS~~~~g~~~~~~~~e~  211 (296)
                        +++ |+||||||......    ..+..+..+++|+.++.++++++.    +.+ .++||++||...+.          
T Consensus        88 ~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~----------  157 (264)
T 2pd6_A           88 CFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV----------  157 (264)
T ss_dssp             HHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH----------
T ss_pred             HhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhcc----------
Confidence              566 99999999865432    344556688999999888776654    345 57999999986652          


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       212 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                       +.++...|+.||.+.+.+++.++.+   +|+++++++||+|+++..
T Consensus       158 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  203 (264)
T 2pd6_A          158 -GNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMT  203 (264)
T ss_dssp             -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-
T ss_pred             -CCCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccch
Confidence             2334678999999999999999887   799999999999999864

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.95  E-value=3.4e-27  Score=208.90  Aligned_cols=172  Identities=14%  Similarity=0.076  Sum_probs=135.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+|+||||+||||++++++|+++|++|++++|+....++..+.+.+..  +.++.++.+|++|.+++++++++     +
T Consensus        26 ~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (302)
T 1w6u_A           26 GKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT--GNKVHAIQCDVRDPDMVQNTVSELIKVAG  103 (302)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--SSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc--CCceEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999987544444444433321  25688999999999999888765     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHH-----HcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMA-----RHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~-----~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||.....+    ..++....+++|+.++..+++++.     +.+.++||++||.+.+.           +.+
T Consensus       104 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~  172 (302)
T 1w6u_A          104 HPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET-----------GSG  172 (302)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH-----------CCT
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEccccccc-----------CCC
Confidence            8999999999754422    334456688999999877655553     23457999999987763           234


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.||++.+.+++.++.+   +|+++++++||.|+++.
T Consensus       173 ~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~  214 (302)
T 1w6u_A          173 FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKG  214 (302)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcc
Confidence            5778999999999999999988   79999999999999984

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.95  E-value=4.8e-27  Score=203.93  Aligned_cols=168  Identities=19%  Similarity=0.182  Sum_probs=136.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+|+||||+||||++++++|+++|++|++++|+....++..+.   +   +.++.++.+|++|.+++++++++     +
T Consensus        12 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~---~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (265)
T 2o23_A           12 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKK---L---GNNCVFAPADVTSEKDVQTALALAKGKFG   85 (265)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHH---H---CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHH---h---CCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence            38999999999999999999999999999999876554433332   2   25788999999999999988864     5


Q ss_pred             CCcEEEEcccccCcCC----------CCcChHHHHHHHHHHHHHHHHHHHHc----------CCCEEEEEcccccccCCC
Q 022471          145 AFDAVMHFAAVAYVGE----------STLDPLKYYHNITSNTLVVLESMARH----------GVDTLIYSSTCATYGEPE  204 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----------~~~~~~~~~~~n~~~t~~ll~~~~~~----------~~~riV~~SS~~~~g~~~  204 (296)
                      ++|+||||||......          ..++....+++|+.++..+++++.+.          +.++||++||...+.   
T Consensus        86 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~---  162 (265)
T 2o23_A           86 RVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE---  162 (265)
T ss_dssp             CCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH---
T ss_pred             CCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcC---
Confidence            8999999999864432          23345668889999988877766543          567999999988763   


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          205 KMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       205 ~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                              +.++...|+.||++.+.+++.++.+   .|+++++|+||.|.++.
T Consensus       163 --------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  207 (265)
T 2o23_A          163 --------GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPL  207 (265)
T ss_dssp             --------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-
T ss_pred             --------CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCcc
Confidence                    2345679999999999999999887   68999999999999875

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.95  E-value=7.4e-27  Score=206.59  Aligned_cols=172  Identities=15%  Similarity=0.048  Sum_probs=139.1

Q ss_pred             CccEEEEEcCCC--hhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc---
Q 022471           69 GVTHVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (296)
Q Consensus        69 ~~k~vlVTGasG--~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (296)
                      .+|+||||||+|  |||++++++|+++|++|++++|+....+...+..+..    ..+.++++|++|.+++++++++   
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~  104 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL----GVKLTVPCDVSDAESVDNMFKVLAE  104 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH----TCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc----CCeEEEEcCCCCHHHHHHHHHHHHH
Confidence            348999999997  9999999999999999999998754333333333322    3468899999999999988875   


Q ss_pred             --CCCcEEEEcccccCc--------CCCCcChHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEcccccccCCCCCCCCCC
Q 022471          144 --NAFDAVMHFAAVAYV--------GESTLDPLKYYHNITSNTLVVLESMARHG--VDTLIYSSTCATYGEPEKMPITEE  211 (296)
Q Consensus       144 --~~~D~vi~~Ag~~~~--------~~~~~~~~~~~~~n~~~t~~ll~~~~~~~--~~riV~~SS~~~~g~~~~~~~~e~  211 (296)
                        +++|+||||||+...        ....+++...+++|+.++..+++++.+.-  .++||++||.+.+           
T Consensus       105 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~-----------  173 (296)
T 3k31_A          105 EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAE-----------  173 (296)
T ss_dssp             HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGT-----------
T ss_pred             HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhc-----------
Confidence              689999999998643        22444566788999999999888886542  4599999998776           


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       212 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      .+.++...|+.||++.+.+++.++.|   +||++++|+||.|.++..
T Consensus       174 ~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~  220 (296)
T 3k31_A          174 KVVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLAS  220 (296)
T ss_dssp             SCCTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSC
T ss_pred             cCCCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchh
Confidence            23455789999999999999999988   699999999999999763

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.95  E-value=4.6e-27  Score=205.85  Aligned_cols=173  Identities=17%  Similarity=0.092  Sum_probs=138.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+||||||+||||++++++|+++|++|++++|+....++..+.++..   +.++.++.+|++|.+++++++++     +
T Consensus        34 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  110 (279)
T 3ctm_A           34 GKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY---GVHSKAYKCNISDPKSVEETISQQEKDFG  110 (279)
T ss_dssp             TCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH---CSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            489999999999999999999999999999998766555444444333   35688999999999999888865     5


Q ss_pred             CCcEEEEcccccCc-CCC-----CcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYV-GES-----TLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~-~~~-----~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                      ++|+||||||.... ...     .+.....+++|+.+    ++.+++.|++.+.++||++||...+..         .+.
T Consensus       111 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~---------~~~  181 (279)
T 3ctm_A          111 TIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIV---------NIP  181 (279)
T ss_dssp             CCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC------------
T ss_pred             CCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccC---------CCC
Confidence            79999999998654 222     23345578899999    677888888888889999999876521         013


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      ++...|+.||++.+.+++.++.+   .+ ++++++||.|.++..
T Consensus       182 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~  224 (279)
T 3ctm_A          182 QLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDIT  224 (279)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTT
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccc
Confidence            45678999999999999999987   57 999999999998753

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.95  E-value=4.4e-27  Score=204.70  Aligned_cols=160  Identities=13%  Similarity=0.088  Sum_probs=130.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+||||||+||||++++++|+++|++|++++|+...              +.++.++.+|++|.+++++++++     +
T Consensus         8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   73 (264)
T 2dtx_A            8 DKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG--------------EAKYDHIECDVTNPDQVKASIDHIFKEYG   73 (264)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC--------------SCSSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc--------------CCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999986533              24678899999999999988865     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHH----HHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLE----SMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~----~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||......    ..+.+...+++|+.++..+++    .|++.+.++||++||.+.+.           +.++
T Consensus        74 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  142 (264)
T 2dtx_A           74 SISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASI-----------ITKN  142 (264)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTS-----------CCTT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhcc-----------CCCC
Confidence            8999999999865433    334456678899999666554    44455678999999988762           3345


Q ss_pred             CChHHHHHHHHHHHHHHhhhcCC--CcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKNSD--MAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~~g--i~~~~lrpg~v~Gp~  254 (296)
                      ...|+.||++.+.+++.++.+.+  +++++|+||.|.++.
T Consensus       143 ~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~  182 (264)
T 2dtx_A          143 ASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPL  182 (264)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcc
Confidence            67999999999999999998733  999999999998763

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.95  E-value=4.1e-27  Score=202.05  Aligned_cols=167  Identities=18%  Similarity=0.156  Sum_probs=132.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-CCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~  148 (296)
                      +|+|+||||+||||++++++|+++|++|++++|+..+.+   +..++.    .+..++.+|++|.++++++++. +++|+
T Consensus         7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~---~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~id~   79 (244)
T 3d3w_A            7 GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLD---SLVREC----PGIEPVCVDLGDWEATERALGSVGPVDL   79 (244)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---HHHHHS----TTCEEEECCTTCHHHHHHHHTTCCCCCE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---HHHHHc----CCCCEEEEeCCCHHHHHHHHHHcCCCCE
Confidence            389999999999999999999999999999997643222   222222    2456779999999999999875 57999


Q ss_pred             EEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHH----HHcC-CCEEEEEcccccccCCCCCCCCCCCCCCCCCh
Q 022471          149 VMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESM----ARHG-VDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (296)
Q Consensus       149 vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~----~~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~  219 (296)
                      ||||||......    ..+..+..+++|+.++..+++++    ++.+ .++||++||...+.           +.++.+.
T Consensus        80 vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~  148 (244)
T 3d3w_A           80 LVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR-----------AVTNHSV  148 (244)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS-----------CCTTBHH
T ss_pred             EEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhcc-----------CCCCCch
Confidence            999999765432    23345668899999966655554    4445 67999999987762           3345789


Q ss_pred             HHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          220 YGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       220 Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      |+.||++.+.+++.++.+   .|+++++++||.|+++.
T Consensus       149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~  186 (244)
T 3d3w_A          149 YCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSM  186 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTT
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccc
Confidence            999999999999999887   68999999999999985

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.95  E-value=3.2e-27  Score=206.02  Aligned_cols=174  Identities=12%  Similarity=0.064  Sum_probs=136.7

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|+++||||+||||++++++|+++|++|++++++..  ....+.+......+.++.++.+|++|.+++++++++     
T Consensus        24 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           24 AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERN--DHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF  101 (269)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCH--HHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCch--HHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3489999999999999999999999999999985332  222222233323346789999999999999988865     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHH----HHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVL----ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll----~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +++|+||||||+.....    ..++.+..+++|+.++.+++    +.|++.+.++||++||...+.           +.+
T Consensus       102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  170 (269)
T 3gk3_A          102 GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSR-----------GAF  170 (269)
T ss_dssp             SCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-----------CCT
T ss_pred             CCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhcc-----------CCC
Confidence            58999999999865443    33445567889999966655    445556778999999987762           334


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      +...|+.||++.+.+++.++.+   .|+++++++||.|.++..
T Consensus       171 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  213 (269)
T 3gk3_A          171 GQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMV  213 (269)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTT
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhh
Confidence            5789999999999999999987   589999999999998764

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.95  E-value=4.4e-27  Score=202.58  Aligned_cols=170  Identities=17%  Similarity=0.195  Sum_probs=133.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+|+||||+||||++++++|+++|++|++++|+....++..   +++.. ..++.++.+|++|.+++++++++     +
T Consensus         6 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (251)
T 1zk4_A            6 GKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAA---KSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAFG   81 (251)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHhhc-cCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            389999999999999999999999999999998653332222   22221 25788999999999999988865     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHH----HHHHHHHcCC-CEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLV----VLESMARHGV-DTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~~-~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||......    ..+.....+++|+.++..    +++.|++.+. ++||++||...+.           +.+
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~  150 (251)
T 1zk4_A           82 PVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV-----------GDP  150 (251)
T ss_dssp             SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS-----------CCT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhcc-----------CCC
Confidence            7999999999765432    233445678899997554    5566666666 7999999988763           234


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc-----CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN-----SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~-----~gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.||++.+.+++.++.+     .|+++++++||+|+++.
T Consensus       151 ~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~  194 (251)
T 1zk4_A          151 SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPL  194 (251)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHH
T ss_pred             CCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchh
Confidence            5779999999999999988763     68999999999999974

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.95  E-value=3.1e-27  Score=206.32  Aligned_cols=171  Identities=14%  Similarity=0.070  Sum_probs=136.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-cchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG-NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      +|+||||||+||||++++++|+++|++|++++|+... .+...+.+++   .+.++.++.+|++|.+++++++++     
T Consensus        29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~v~~~~~~~~~~~  105 (271)
T 4iin_A           29 GKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEE---KGYKAAVIKFDAASESDFIEAIQTIVQSD  105 (271)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh---cCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            4899999999999999999999999999999985432 2222233322   246789999999999999988865     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +++|+||||||+.....    ..++..+.+++|+.++..    +++.+++.+.++||++||...+           .+.+
T Consensus       106 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~~  174 (271)
T 4iin_A          106 GGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGE-----------RGNM  174 (271)
T ss_dssp             SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH-----------HCCT
T ss_pred             CCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhc-----------CCCC
Confidence            68999999999865443    334556678899999655    5555666677899999998776           2344


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.||++.+.+++.++.+   .|+++++++||.|.++.
T Consensus       175 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  216 (271)
T 4iin_A          175 GQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDM  216 (271)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-
T ss_pred             CchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCc
Confidence            5789999999999999999988   79999999999999875

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.95  E-value=4.5e-27  Score=202.03  Aligned_cols=171  Identities=12%  Similarity=0.052  Sum_probs=124.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEe-cCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVD-NLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      +|+|+||||+||||++++++|+++|++|++++ |+....++..+.++..   +.++.++.+|++|.+++++++++     
T Consensus         5 ~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T 2hq1_A            5 GKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA---GINVVVAKGDVKNPEDVENMVKTAMDAF   81 (247)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHT---TCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhc---CCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            38999999999999999999999999999984 4433333333333322   35788999999999999988864     


Q ss_pred             CCCcEEEEcccccCcC----CCCcChHHHHHHHHHHHHHHH----HHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVG----ESTLDPLKYYHNITSNTLVVL----ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~----~~~~~~~~~~~~n~~~t~~ll----~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +++|+||||||.....    ...+..++.+++|+.++.+++    +.|++.+.++||++||...+           .+.+
T Consensus        82 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-----------~~~~  150 (247)
T 2hq1_A           82 GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGI-----------IGNA  150 (247)
T ss_dssp             SCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-------------------
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhc-----------cCCC
Confidence            5899999999986432    244566778999999966554    44555677899999997543           1223


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +..+|+.||++.+.+++.++.+   .|+++++++||.+.++.
T Consensus       151 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  192 (247)
T 2hq1_A          151 GQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDM  192 (247)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             CCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccc
Confidence            4678999999999999999887   58999999999998763

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.95  E-value=3e-27  Score=201.76  Aligned_cols=166  Identities=16%  Similarity=0.098  Sum_probs=128.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+|+||||+||||++++++|+++|++|++++|+....++.   .++.    .++.++.+|++|.+++++++++     ++
T Consensus         6 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~---~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (234)
T 2ehd_A            6 GAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQAL---AAEL----EGALPLPGDVREEGDWARAVAAMEEAFGE   78 (234)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHHS----TTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---HHHh----hhceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            7899999999999999999999999999999754332222   2221    2678899999999999888764     58


Q ss_pred             CcEEEEcccccCcCC----CCcChHHHHHHHHHHHH----HHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGE----STLDPLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~----~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +|+||||||......    ..++....+++|+.++.    .+++.|++.+.++||++||...+.           +.++.
T Consensus        79 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~  147 (234)
T 2ehd_A           79 LSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKN-----------PFKGG  147 (234)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTS-----------CCTTC
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcC-----------CCCCC
Confidence            999999999764433    33445667889999975    566677777778999999987762           33457


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..|+.||.+.+.+++.++.+   .|+++++++||.|.++.
T Consensus       148 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  187 (234)
T 2ehd_A          148 AAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGF  187 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC------
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCc
Confidence            79999999999999999876   68999999999998865

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.95  E-value=3.8e-27  Score=204.40  Aligned_cols=169  Identities=14%  Similarity=0.140  Sum_probs=128.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+   +.   +.++.++.+|++|.+++++++++     +
T Consensus         9 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~---~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   82 (261)
T 3n74_A            9 GKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAG---EI---GDAALAVAADISKEADVDAAVEAALSKFG   82 (261)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HH---CTTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH---Hh---CCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            3899999999999999999999999999999986544333322   22   35789999999999999988865     5


Q ss_pred             CCcEEEEcccccCc-CC----CCcChHHHHHHHHHHHHH----HHHHHHHcC----CCEEEEEcccccccCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYV-GE----STLDPLKYYHNITSNTLV----VLESMARHG----VDTLIYSSTCATYGEPEKMPITEE  211 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~-~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~----~~riV~~SS~~~~g~~~~~~~~e~  211 (296)
                      ++|+||||||.... ..    ..++....+++|+.++..    +++.+++++    .++||++||...+           
T Consensus        83 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~-----------  151 (261)
T 3n74_A           83 KVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAG-----------  151 (261)
T ss_dssp             CCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTT-----------
T ss_pred             CCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhc-----------
Confidence            89999999998652 22    334455678899999555    445555543    4589999998765           


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       212 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      .+.+....|+.||++.+.+++.++.|   +|+++++++||.|.++..
T Consensus       152 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  198 (261)
T 3n74_A          152 RPRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLL  198 (261)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhh
Confidence            34445778999999999999999988   689999999999998864

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.95  E-value=4e-27  Score=200.64  Aligned_cols=168  Identities=15%  Similarity=0.170  Sum_probs=129.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc--CCCc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--NAFD  147 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~--~~~D  147 (296)
                      ||+||||||+||||++++++|+++|++|++++|+....++..   +++   +.++.++.+|++|.+++++++++  ..+|
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~---~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~d   74 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVT---NCL---SNNVGYRARDLASHQEVEQLFEQLDSIPS   74 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH---HTC---SSCCCEEECCTTCHHHHHHHHHSCSSCCS
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHH---hhccCeEeecCCCHHHHHHHHHHHhhcCC
Confidence            588999999999999999999999999999998654333222   222   35788999999999999999976  3459


Q ss_pred             EEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcccccccCCCCCCCCCCCCCCCCCh
Q 022471          148 AVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMAR----HGVDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (296)
Q Consensus       148 ~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~----~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~  219 (296)
                      +||||||......    ..++.++.+++|+.++..+++++.+    ++ ++||++||...+           .+.++...
T Consensus        75 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~-----------~~~~~~~~  142 (230)
T 3guy_A           75 TVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-VNVVMIMSTAAQ-----------QPKAQEST  142 (230)
T ss_dssp             EEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CEEEEECCGGGT-----------SCCTTCHH
T ss_pred             EEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeecccC-----------CCCCCCch
Confidence            9999999865443    3344456788999998776666544    33 399999998876           33455789


Q ss_pred             HHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          220 YGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       220 Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      |+.||++.+.+++.++.|   .|+++++++||.|.++..
T Consensus       143 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  181 (230)
T 3guy_A          143 YCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFW  181 (230)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC-----
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHH
Confidence            999999999999999988   589999999999998753

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.95  E-value=2e-27  Score=209.34  Aligned_cols=172  Identities=15%  Similarity=0.126  Sum_probs=134.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC-CCcchhhhhhhhhCCCCCceEEEEccCCC----HHHHHHHhhc-
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIYADLGD----AKAVNKFFSE-  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d----~~~v~~~~~~-  143 (296)
                      +|++|||||+||||++++++|+++|++|++++|+. ...++..+.+...  .+.++.++.+|++|    .+++++++++ 
T Consensus        23 ~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~  100 (288)
T 2x9g_A           23 APAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE--RSNTAVVCQADLTNSNVLPASCEEIINSC  100 (288)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHH--STTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhh--cCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence            38999999999999999999999999999999875 4444444443311  13578899999999    9998888764 


Q ss_pred             ----CCCcEEEEcccccCcCCC-----C---------cChHHHHHHHHHHHHHHHHHHH----HcC------CCEEEEEc
Q 022471          144 ----NAFDAVMHFAAVAYVGES-----T---------LDPLKYYHNITSNTLVVLESMA----RHG------VDTLIYSS  195 (296)
Q Consensus       144 ----~~~D~vi~~Ag~~~~~~~-----~---------~~~~~~~~~n~~~t~~ll~~~~----~~~------~~riV~~S  195 (296)
                          +++|+||||||+......     .         +.....+++|+.++..+++++.    +.+      .++||++|
T Consensus       101 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~is  180 (288)
T 2x9g_A          101 FRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLC  180 (288)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEEC
T ss_pred             HHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEe
Confidence                689999999998654332     2         2234578899999777665554    333      56999999


Q ss_pred             ccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          196 TCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       196 S~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      |.+.+           .+.++...|+.||++.+.+++.++.+   .||++++|+||.|+++.
T Consensus       181 S~~~~-----------~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  231 (288)
T 2x9g_A          181 DAMVD-----------QPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV  231 (288)
T ss_dssp             CTTTT-----------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT
T ss_pred             ccccc-----------CCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc
Confidence            98776           23445788999999999999999987   58999999999999986

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.95  E-value=1.2e-26  Score=204.23  Aligned_cols=170  Identities=19%  Similarity=0.133  Sum_probs=133.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcch-------hhhhhhhhCCCCCceEEEEccCCCHHHHHHHhh
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIG-------AVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS  142 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~-------~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~  142 (296)
                      +|++|||||+||||++++++|+++|++|++++|+..+.++       ..+.++..   +.++.++++|++|.++++++++
T Consensus         9 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~   85 (285)
T 3sc4_A            9 GKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA---GGQALPIVGDIRDGDAVAAAVA   85 (285)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH---TSEEEEEECCTTSHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc---CCcEEEEECCCCCHHHHHHHHH
Confidence            3899999999999999999999999999999998764332       22223222   4678999999999999998886


Q ss_pred             c-----CCCcEEEEcccccCcCCCC----cChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcccccccCCCCCCCC
Q 022471          143 E-----NAFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVVLESMAR----HGVDTLIYSSTCATYGEPEKMPIT  209 (296)
Q Consensus       143 ~-----~~~D~vi~~Ag~~~~~~~~----~~~~~~~~~n~~~t~~ll~~~~~----~~~~riV~~SS~~~~g~~~~~~~~  209 (296)
                      +     +++|+||||||+.......    +..+..+++|+.++..+++++.+    ++.++||++||...+..       
T Consensus        86 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-------  158 (285)
T 3sc4_A           86 KTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEP-------  158 (285)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSG-------
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccC-------
Confidence            5     6899999999987554433    33455677999998887776644    46679999999766521       


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCe-eec
Q 022471          210 EETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFN-VIG  252 (296)
Q Consensus       210 e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~-v~G  252 (296)
                         ...+...|+.||++.+.+++.++.|   +||++++|+||. +-.
T Consensus       159 ---~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t  202 (285)
T 3sc4_A          159 ---KWLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVAT  202 (285)
T ss_dssp             ---GGSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCC
T ss_pred             ---CCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcccc
Confidence               1134578999999999999999988   689999999994 543

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.95  E-value=4.2e-27  Score=203.65  Aligned_cols=168  Identities=13%  Similarity=0.106  Sum_probs=133.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      |++|||||+||||++++++|+++|  +.|++++|+....++..   ++.   +.++.++.+|++|.+++++++++     
T Consensus         3 k~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~---~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (254)
T 3kzv_A            3 KVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLK---EKY---GDRFFYVVGDITEDSVLKQLVNAAVKGH   76 (254)
T ss_dssp             CEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHH---HHH---GGGEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHH---HHh---CCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            899999999999999999999985  78888887543333222   222   35788999999999999988865     


Q ss_pred             CCCcEEEEcccccCc-CC----CCcChHHHHHHHHHHHHHHHHH----HHHcCCCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYV-GE----STLDPLKYYHNITSNTLVVLES----MARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~-~~----~~~~~~~~~~~n~~~t~~ll~~----~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                      +++|+||||||+... ..    ..++++..+++|+.++..++++    |++.+ ++||++||...+           .+.
T Consensus        77 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~-----------~~~  144 (254)
T 3kzv_A           77 GKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACN-----------MYF  144 (254)
T ss_dssp             SCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCC-----------CSS
T ss_pred             CCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhc-----------cCC
Confidence            689999999998543 22    3344566888999997665544    46666 799999998765           334


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc-CCCcEEEEecCeeecCCCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN-SDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~-~gi~~~~lrpg~v~Gp~~~  256 (296)
                      ++...|+.||++.+.+++.++.| .|+++++|+||.|.++...
T Consensus       145 ~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~  187 (254)
T 3kzv_A          145 SSWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQV  187 (254)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSC
T ss_pred             CCcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHH
Confidence            55789999999999999999988 5999999999999998643

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.95  E-value=8e-27  Score=204.09  Aligned_cols=175  Identities=13%  Similarity=0.096  Sum_probs=133.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchh----hhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc--
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGA----VKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~----~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~--  143 (296)
                      +|++|||||+||||++++++|+++|++|++++|+....++.    .+..+.....+.++.++.+|++|.+++++++++  
T Consensus         6 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   85 (274)
T 3e03_A            6 GKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATV   85 (274)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence            39999999999999999999999999999999987553322    111111111246789999999999999988865  


Q ss_pred             ---CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHH----HHHHcCCCEEEEEcccccccCCCCCCCCCCC
Q 022471          144 ---NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLE----SMARHGVDTLIYSSTCATYGEPEKMPITEET  212 (296)
Q Consensus       144 ---~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~----~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~  212 (296)
                         +++|+||||||+.....    ..+..+..+++|+.++..+.+    .|++++.++||++||...+...         
T Consensus        86 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---------  156 (274)
T 3e03_A           86 DTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPA---------  156 (274)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHH---------
T ss_pred             HHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCC---------
Confidence               68999999999865443    233445678899999666554    4555667899999997765210         


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCe-eecC
Q 022471          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFN-VIGS  253 (296)
Q Consensus       213 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~-v~Gp  253 (296)
                      +.++...|+.||++.+.+++.++.|   +||++++|+||. +-.+
T Consensus       157 ~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~  201 (274)
T 3e03_A          157 WWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATD  201 (274)
T ss_dssp             HHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccc
Confidence            0234678999999999999999988   689999999995 5444

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.95  E-value=5.8e-27  Score=204.29  Aligned_cols=171  Identities=20%  Similarity=0.140  Sum_probs=133.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC-CcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR-GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      +|++|||||+||||++++++|+++|++|++++++.. ..++..+.++.   .+.++.++.+|++|.+++++++++     
T Consensus        27 ~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  103 (267)
T 3u5t_A           27 NKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEA---AGGKALTAQADVSDPAAVRRLFATAEEAF  103 (267)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            489999999999999999999999999999865332 22233333332   246788999999999999988865     


Q ss_pred             CCCcEEEEcccccCcCCCC----cChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~~~----~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +++|+||||||+.......    +..+..+++|+.++..+++++.+.  ..++||++||...+.           +.++.
T Consensus       104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~  172 (267)
T 3u5t_A          104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGL-----------LHPSY  172 (267)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHH-----------CCTTC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhcc-----------CCCCc
Confidence            6899999999986544433    334556779999998888777654  236999999987652           33456


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..|+.||++.+.+++.++.|   .||++++|+||.|.++.
T Consensus       173 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  212 (267)
T 3u5t_A          173 GIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDL  212 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC---
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCcc
Confidence            79999999999999999988   58999999999998875

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.95  E-value=2.7e-27  Score=203.05  Aligned_cols=170  Identities=14%  Similarity=0.094  Sum_probs=134.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEE-ecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIV-DNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      |+|+||||+||||++++++|+++|++|+++ +|+....++..+.++..   +.++.++.+|++|.+++++++++     +
T Consensus         2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (244)
T 1edo_A            2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY---GGQAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH---TCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---CCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            799999999999999999999999999985 66543333333333332   35788999999999999988864     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||......    ..+..++.+++|+.++.++++++    ++.+.++||++||...+.           +.++
T Consensus        79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~  147 (244)
T 1edo_A           79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLI-----------GNIG  147 (244)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH-----------CCTT
T ss_pred             CCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcC-----------CCCC
Confidence            8999999999865432    33445668899999977765555    445678999999986652           2234


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.||.+.+.+++.++.+   .|+++++++||+++++.
T Consensus       148 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  188 (244)
T 1edo_A          148 QANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDM  188 (244)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHH
T ss_pred             CccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccch
Confidence            678999999999999999887   69999999999999874

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.95  E-value=1.6e-27  Score=201.62  Aligned_cols=163  Identities=12%  Similarity=0.047  Sum_probs=127.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+||||||||+||++++++|+++|++|++++|+..+..       .+.  ..++.++.+|++|.++  +.+  .++|+||
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-------~~~--~~~~~~~~~D~~d~~~--~~~--~~~d~vi   67 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAA-------DRL--GATVATLVKEPLVLTE--ADL--DSVDAVV   67 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-------HHT--CTTSEEEECCGGGCCH--HHH--TTCSEEE
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccc-------ccc--CCCceEEecccccccH--hhc--ccCCEEE
Confidence            57999999999999999999999999999998643221       111  2478999999999988  555  6899999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCC---CCCCCCCCCCCCChHHHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEK---MPITEETPQAPINPYGKAKKMA  227 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~---~~~~e~~~~~~~~~Y~~sK~~~  227 (296)
                      ||||.....       ...+.|+.++.+++++|++.+ +++|++||.+.+.....   .+.++...+.|.+.|+.+|.++
T Consensus        68 ~~ag~~~~~-------~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~  139 (224)
T 3h2s_A           68 DALSVPWGS-------GRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQY  139 (224)
T ss_dssp             ECCCCCTTS-------SCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHH
T ss_pred             ECCccCCCc-------chhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHH
Confidence            999976221       124679999999999999998 99999999866543322   2334444444588999999999


Q ss_pred             HHHHHHhhhcCCCcEEEEecCeeecCCC
Q 022471          228 EDIILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       228 e~~~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                      |.+ +.+.++.+++++++||+++|||++
T Consensus       140 e~~-~~~~~~~~i~~~ivrp~~v~g~~~  166 (224)
T 3h2s_A          140 YEY-QFLQMNANVNWIGISPSEAFPSGP  166 (224)
T ss_dssp             HHH-HHHTTCTTSCEEEEEECSBCCCCC
T ss_pred             HHH-HHHHhcCCCcEEEEcCccccCCCc
Confidence            954 556666899999999999999854

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.95  E-value=7.5e-27  Score=203.36  Aligned_cols=168  Identities=24%  Similarity=0.203  Sum_probs=133.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+++||||+||||++++++|+++|++|++++|+.....+..+.+.+.. .+.++.++.+|++|.+++++++++     ++
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (267)
T 2gdz_A            8 KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF-EPQKTLFIQCDVADQQQLRDTFRKVVDHFGR   86 (267)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTS-CGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhc-CCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999986543333333332211 124688999999999999988865     68


Q ss_pred             CcEEEEcccccCcCCCCcChHHHHHHHHHH----HHHHHHHHHHcC---CCEEEEEcccccccCCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSN----TLVVLESMARHG---VDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~----t~~ll~~~~~~~---~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (296)
                      +|+||||||...    .+++++.+++|+.+    ++.+++.|++.+   .++||++||.+.+.           +.++..
T Consensus        87 id~lv~~Ag~~~----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~  151 (267)
T 2gdz_A           87 LDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM-----------PVAQQP  151 (267)
T ss_dssp             CCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS-----------CCTTCH
T ss_pred             CCEEEECCCCCC----hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccC-----------CCCCCc
Confidence            999999999753    45678899999886    556777776653   57999999988763           234467


Q ss_pred             hHHHHHHHHHHHHHHhh--hc---CCCcEEEEecCeeecCC
Q 022471          219 PYGKAKKMAEDIILDFS--KN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       219 ~Y~~sK~~~e~~~~~~~--~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      .|+.||++.+.+++.++  .+   .|+++++|+||.|.++.
T Consensus       152 ~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~  192 (267)
T 2gdz_A          152 VYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAI  192 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchh
Confidence            89999999999999853  33   79999999999998874

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.95  E-value=8.7e-27  Score=201.60  Aligned_cols=160  Identities=18%  Similarity=0.137  Sum_probs=130.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+|+||||+||||++++++|+++|++|++++|+....              ..+.++++|++|.+++++++++     +
T Consensus        21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~--------------~~~~~~~~Dl~d~~~v~~~~~~~~~~~g   86 (253)
T 2nm0_A           21 SRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP--------------EGFLAVKCDITDTEQVEQAYKEIEETHG   86 (253)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC--------------TTSEEEECCTTSHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh--------------ccceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            48999999999999999999999999999999865332              2367889999999999888765     6


Q ss_pred             CCcEEEEcccccCcC----CCCcChHHHHHHHHHHHHHHHH----HHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVG----ESTLDPLKYYHNITSNTLVVLE----SMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~----~~~~~~~~~~~~n~~~t~~ll~----~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||+....    ...++.++.+++|+.++..+++    .|++.+.++||++||.+.+.           +.++
T Consensus        87 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~~  155 (253)
T 2nm0_A           87 PVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLL-----------GSAG  155 (253)
T ss_dssp             SCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCC-----------CHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC-----------CCCC
Confidence            799999999986433    2456778899999999766554    55556778999999977652           2223


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.||++.+.+++.++.|   .|+++++|+||.|.++.
T Consensus       156 ~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~  196 (253)
T 2nm0_A          156 QANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDM  196 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC--
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcc
Confidence            568999999999999999887   68999999999998875

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.95  E-value=5.1e-27  Score=202.77  Aligned_cols=173  Identities=15%  Similarity=0.109  Sum_probs=135.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecC-CCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL-SRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      +|+|+||||+||||++++++|+++|++|++++|+ ....++..+.++..   +.++.++.+|++|.+++++++++     
T Consensus         7 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (258)
T 3afn_B            7 GKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD---GGDAAFFAADLATSEACQQLVDEFVAKF   83 (258)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT---TCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc---CCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3899999999999999999999999999999987 54444444444332   35788999999999999988864     


Q ss_pred             CCCcEEEEcccc-cCcCC----CCcChHHHHHHHHHHHHHHHHH----HHHcC--C---CEEEEEcccccccCCCCCCCC
Q 022471          144 NAFDAVMHFAAV-AYVGE----STLDPLKYYHNITSNTLVVLES----MARHG--V---DTLIYSSTCATYGEPEKMPIT  209 (296)
Q Consensus       144 ~~~D~vi~~Ag~-~~~~~----~~~~~~~~~~~n~~~t~~ll~~----~~~~~--~---~riV~~SS~~~~g~~~~~~~~  209 (296)
                      +++|+||||||. .....    ..+.....+++|+.++..++++    +++.+  .   ++||++||...+..       
T Consensus        84 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-------  156 (258)
T 3afn_B           84 GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG-------  156 (258)
T ss_dssp             SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC-------
T ss_pred             CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC-------
Confidence            489999999997 33222    2233556788999997776654    44333  2   69999999877631       


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          210 EETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       210 e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                         +.++..+|+.||++.+.+++.++.+   .|+++++++||.|+++..
T Consensus       157 ---~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~  202 (258)
T 3afn_B          157 ---GGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFH  202 (258)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGG
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccc
Confidence               2345779999999999999999877   499999999999999863

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.95  E-value=4e-27  Score=205.65  Aligned_cols=173  Identities=17%  Similarity=0.197  Sum_probs=132.0

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEe-cCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVD-NLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (296)
                      .+|+||||||+||||++++++|+++|++|++++ |+....+...+.+++   .+.++.++.+|++|.+++++++++    
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  101 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITE---SGGEAVAIPGDVGNAADIAAMFSAVDRQ  101 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH---TTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHh---cCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            348999999999999999999999999998874 333333333333332   246789999999999999988865    


Q ss_pred             -CCCcEEEEcccccCc-CC----CCcChHHHHHHHHHHHHHHHHHHHHc-------CCCEEEEEcccccccCCCCCCCCC
Q 022471          144 -NAFDAVMHFAAVAYV-GE----STLDPLKYYHNITSNTLVVLESMARH-------GVDTLIYSSTCATYGEPEKMPITE  210 (296)
Q Consensus       144 -~~~D~vi~~Ag~~~~-~~----~~~~~~~~~~~n~~~t~~ll~~~~~~-------~~~riV~~SS~~~~g~~~~~~~~e  210 (296)
                       +++|+||||||+... ..    ..++.++.+++|+.++..+++++.+.       +.++||++||.+.+..        
T Consensus       102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------  173 (272)
T 4e3z_A          102 FGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILG--------  173 (272)
T ss_dssp             HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHC--------
T ss_pred             CCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccC--------
Confidence             589999999998653 22    34455678899999987776665432       3568999999877522        


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       211 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                        .......|+.||++.+.+++.++.+   .|+++++|+||.|+++.
T Consensus       174 --~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  218 (272)
T 4e3z_A          174 --SATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDL  218 (272)
T ss_dssp             --CTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---
T ss_pred             --CCCCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCc
Confidence              1123567999999999999999987   49999999999999985

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.95  E-value=1.3e-26  Score=203.01  Aligned_cols=176  Identities=18%  Similarity=0.126  Sum_probs=139.4

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|+||||||+||||++++++|+++|++|++++|+....++..+.++... .+.++.++.+|++|.+++++++++     
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  109 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAG-YPGTLIPYRCDLSNEEDILSMFSAIRSQH  109 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcC-CCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            34899999999999999999999999999999986544444444443321 124678899999999999888864     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHH----HHHHHHHHHHcCC--CEEEEEcccccccCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSN----TLVVLESMARHGV--DTLIYSSTCATYGEPEKMPITEETP  213 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~--~riV~~SS~~~~g~~~~~~~~e~~~  213 (296)
                      +++|+||||||......    ..+.....+++|+.+    ++.+++.|++.+.  ++||++||...+..         .+
T Consensus       110 g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~---------~~  180 (279)
T 1xg5_A          110 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV---------LP  180 (279)
T ss_dssp             CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC---------CS
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhccc---------CC
Confidence            58999999999765433    233455678899999    7788899988875  79999999887631         12


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc-----CCCcEEEEecCeeecCC
Q 022471          214 QAPINPYGKAKKMAEDIILDFSKN-----SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       214 ~~~~~~Y~~sK~~~e~~~~~~~~~-----~gi~~~~lrpg~v~Gp~  254 (296)
                      ..+...|+.||++.+.+++.++.+     .++++++|+||.|.++.
T Consensus       181 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~  226 (279)
T 1xg5_A          181 LSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQF  226 (279)
T ss_dssp             CGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchh
Confidence            344678999999999999988865     58999999999998874

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.95  E-value=7.8e-27  Score=200.87  Aligned_cols=165  Identities=15%  Similarity=0.127  Sum_probs=130.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+++||||+||||++++++|+++|++|++++|+..+.+   +..++.     .+.++.+|++|.+++++++++     +
T Consensus         5 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~g   76 (245)
T 1uls_A            5 DKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLR---EAAEAV-----GAHPVVMDVADPASVERGFAEALAHLG   76 (245)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---HHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH---HHHHHc-----CCEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999997543222   222221     278889999999999888765     6


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||+.....    ..+..++.+++|+.++..+++++    ++.+.++||++||.+.++            .++
T Consensus        77 ~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~------------~~~  144 (245)
T 1uls_A           77 RLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLG------------NLG  144 (245)
T ss_dssp             SCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGC------------CTT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcC------------CCC
Confidence            8999999999765433    23345567889999977765544    445678999999987332            234


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.||++.+.+++.++.|   .|+++++|+||.|.++.
T Consensus       145 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  185 (245)
T 1uls_A          145 QANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRM  185 (245)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcc
Confidence            678999999999999999887   68999999999998875

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.95  E-value=6.4e-27  Score=203.32  Aligned_cols=174  Identities=16%  Similarity=0.180  Sum_probs=135.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchh-hhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGA-VKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      ||+|+||||+||||++++++|+++|++|++++|+.....+. .+.++.   .+.++.++++|++|.+++++++++     
T Consensus         7 ~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   83 (264)
T 3i4f_A            7 VRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKD---VEERLQFVQADVTKKEDLHKIVEEAMSHF   83 (264)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGG---GGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHh---cCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            48999999999999999999999999999998754332221 122221   135789999999999999988865     


Q ss_pred             CCCcEEEEcccc--cCcCC----CCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAV--AYVGE----STLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (296)
Q Consensus       144 ~~~D~vi~~Ag~--~~~~~----~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~  213 (296)
                      +++|+||||||+  .....    ..++.++.+++|+.++..+++++    ++.+.++||++||...++.         .+
T Consensus        84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~---------~~  154 (264)
T 3i4f_A           84 GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSA---------PG  154 (264)
T ss_dssp             SCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGC---------CC
T ss_pred             CCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhccc---------CC
Confidence            589999999994  22222    33445667899999977666555    7777789999999754321         23


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       214 ~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      ..+.+.|+.||++.+.+++.++.|   .|+++++++||.|+++..
T Consensus       155 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  199 (264)
T 3i4f_A          155 WIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMK  199 (264)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGG
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccc
Confidence            345689999999999999999988   799999999999999863

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.95  E-value=9e-27  Score=205.76  Aligned_cols=172  Identities=12%  Similarity=0.028  Sum_probs=134.7

Q ss_pred             CccEEEEEcCCCh--hhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc---
Q 022471           69 GVTHVLVTGGAGY--IGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (296)
Q Consensus        69 ~~k~vlVTGasG~--IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (296)
                      .+|++|||||+|+  ||++++++|+++|++|++++|+....+...+..++    ..++.++.+|++|.+++++++++   
T Consensus        30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~  105 (293)
T 3grk_A           30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEE----LGAFVAGHCDVADAASIDAVFETLEK  105 (293)
T ss_dssp             TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHH----HTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh----cCCceEEECCCCCHHHHHHHHHHHHH
Confidence            3499999999966  99999999999999999999863222222222222    24688999999999999988865   


Q ss_pred             --CCCcEEEEcccccCc--------CCCCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCC
Q 022471          144 --NAFDAVMHFAAVAYV--------GESTLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEE  211 (296)
Q Consensus       144 --~~~D~vi~~Ag~~~~--------~~~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~  211 (296)
                        +++|+||||||+...        ....++....+++|+.++..+++++.+.  ..++||++||.+.+.          
T Consensus       106 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~----------  175 (293)
T 3grk_A          106 KWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEK----------  175 (293)
T ss_dssp             HTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTS----------
T ss_pred             hcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhcc----------
Confidence              689999999998641        2234455668899999988888877653  246999999988762          


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       212 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                       +.+....|+.||++.+.+++.++.|   +||++++|+||.|.++..
T Consensus       176 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  221 (293)
T 3grk_A          176 -VMPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAA  221 (293)
T ss_dssp             -BCTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC---
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhh
Confidence             3445789999999999999999988   689999999999999753

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.95  E-value=1.2e-26  Score=200.46  Aligned_cols=167  Identities=11%  Similarity=0.118  Sum_probs=134.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCe-EEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH-HHHHHHhhc----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA-KAVNKFFSE----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~v~~~~~~----  143 (296)
                      +|+|+||||+||||++++++|+++|++ |++++|+...  +..+.+.+..+ +.++.++.+|++|. +++++++++    
T Consensus         5 ~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (254)
T 1sby_A            5 NKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINP-KVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCT-TSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCC-CceEEEEEEecCCChHHHHHHHHHHHHh
Confidence            389999999999999999999999997 9999986532  23333443332 35788999999998 888887764    


Q ss_pred             -CCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHH----cC---CCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 -NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMAR----HG---VDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 -~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~----~~---~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                       +++|+||||||+.    ..+..+..+++|+.++.++++++.+    .+   .++||++||.+.+.           +.+
T Consensus        82 ~g~id~lv~~Ag~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  146 (254)
T 1sby_A           82 LKTVDILINGAGIL----DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN-----------AIH  146 (254)
T ss_dssp             HSCCCEEEECCCCC----CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS-----------CCT
T ss_pred             cCCCCEEEECCccC----CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhcc-----------CCC
Confidence             5899999999974    3457788999999998877766643    32   46899999988762           334


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.||++.+.+++.++.+   +|+++++++||.|.++.
T Consensus       147 ~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~  188 (254)
T 1sby_A          147 QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPL  188 (254)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCcc
Confidence            5678999999999999999987   69999999999999975

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.95  E-value=7.3e-27  Score=203.46  Aligned_cols=173  Identities=17%  Similarity=0.119  Sum_probs=136.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+||||||+||||++++++|+++|++|++++++.  .....+.++++...+.++.++.+|++|.+++++++++     +
T Consensus        26 ~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~--~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (267)
T 4iiu_A           26 SRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRD--AAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHG  103 (267)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCc--hHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            38999999999999999999999999998766432  2222222222222346789999999999999988865     6


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHH-----HcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMA-----RHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~-----~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||......    ..++.+..+++|+.++.++++.+.     +.+.++||++||...+.           +.+
T Consensus       104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  172 (267)
T 4iiu_A          104 AWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVM-----------GNR  172 (267)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHH-----------CCT
T ss_pred             CccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhcc-----------CCC
Confidence            8999999999865433    344556688999999888766653     45667999999987662           334


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      +...|+.||++.+.+++.++.+   .|+++++++||.|.++..
T Consensus       173 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  215 (267)
T 4iiu_A          173 GQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMI  215 (267)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTC
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcc
Confidence            5789999999999999999987   589999999999999863

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.95  E-value=9e-27  Score=202.67  Aligned_cols=171  Identities=15%  Similarity=0.089  Sum_probs=137.1

Q ss_pred             ccEEEEEcCC--ChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----
Q 022471           70 VTHVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (296)
Q Consensus        70 ~k~vlVTGas--G~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (296)
                      +|+||||||+  ||||++++++|+++|++|++++|+. ...+..+.+....   ....++++|++|.+++++++++    
T Consensus         9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T 1qsg_A            9 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQL---GSDIVLQCDVAEDASIDTMFAELGKV   84 (265)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHT---TCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhc---CCcEEEEccCCCHHHHHHHHHHHHHH
Confidence            3899999999  9999999999999999999999876 3333333333322   2347889999999999988864    


Q ss_pred             -CCCcEEEEcccccCc----C-----CCCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCC
Q 022471          144 -NAFDAVMHFAAVAYV----G-----ESTLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEE  211 (296)
Q Consensus       144 -~~~D~vi~~Ag~~~~----~-----~~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~  211 (296)
                       +++|+||||||+...    .     ...++++..+++|+.++.++++++.+.  ..++||++||.+.+.          
T Consensus        85 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~----------  154 (265)
T 1qsg_A           85 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER----------  154 (265)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS----------
T ss_pred             cCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhcc----------
Confidence             579999999997642    1     233455678999999999999988764  235999999987762          


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       212 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                       +.++...|+.||++.+.+++.++.+   +|+++++|+||+|++|..
T Consensus       155 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  200 (265)
T 1qsg_A          155 -AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAA  200 (265)
T ss_dssp             -BCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTG
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchh
Confidence             3345678999999999999999987   589999999999999863

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.95  E-value=1.2e-26  Score=203.03  Aligned_cols=170  Identities=12%  Similarity=0.027  Sum_probs=137.2

Q ss_pred             ccEEEEEcCC--ChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----
Q 022471           70 VTHVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (296)
Q Consensus        70 ~k~vlVTGas--G~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (296)
                      +|+|+||||+  ||||++++++|+++|++|++++|+.. ..+..+.+.+..   .++.++.+|++|.+++++++++    
T Consensus         6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (275)
T 2pd4_A            6 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQEL---NSPYVYELDVSKEEHFKSLYNSVKKD   81 (275)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHT---TCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhc---CCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3899999999  99999999999999999999998764 333333343322   2478899999999999988865    


Q ss_pred             -CCCcEEEEcccccCc--------CCCCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCC
Q 022471          144 -NAFDAVMHFAAVAYV--------GESTLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEET  212 (296)
Q Consensus       144 -~~~D~vi~~Ag~~~~--------~~~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~  212 (296)
                       +++|+||||||+...        ....++.+..+++|+.++..+++++.+.  ..++||++||.+.+.           
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------  150 (275)
T 2pd4_A           82 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTK-----------  150 (275)
T ss_dssp             TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS-----------
T ss_pred             cCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcC-----------
Confidence             589999999998643        2234455668899999999999888765  126999999977652           


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       213 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +.++...|+.||++.+.+++.++.+   +|+++++|+||.|.++.
T Consensus       151 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  195 (275)
T 2pd4_A          151 YMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLA  195 (275)
T ss_dssp             BCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccch
Confidence            2345678999999999999999987   59999999999999975

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.95  E-value=7.4e-27  Score=203.42  Aligned_cols=172  Identities=13%  Similarity=0.039  Sum_probs=134.4

Q ss_pred             CccEEEEEcCC--ChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc---
Q 022471           69 GVTHVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (296)
Q Consensus        69 ~~k~vlVTGas--G~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (296)
                      .+|+||||||+  ||||++++++|+++|++|++++|+.+..+. .+.+.+.   ..++.++.+|++|.+++++++++   
T Consensus        13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~   88 (271)
T 3ek2_A           13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDR-ITEFAAE---FGSELVFPCDVADDAQIDALFASLKT   88 (271)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHH---TTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHH-HHHHHHH---cCCcEEEECCCCCHHHHHHHHHHHHH
Confidence            34999999999  999999999999999999999987433322 2222222   24588999999999999988865   


Q ss_pred             --CCCcEEEEcccccCc----C-----CCCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCC
Q 022471          144 --NAFDAVMHFAAVAYV----G-----ESTLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITE  210 (296)
Q Consensus       144 --~~~D~vi~~Ag~~~~----~-----~~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e  210 (296)
                        +++|+||||||+...    .     ...++....+++|+.++..+++++.+.  ..++||++||.+.+          
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~----------  158 (271)
T 3ek2_A           89 HWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAE----------  158 (271)
T ss_dssp             HCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGT----------
T ss_pred             HcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccc----------
Confidence              589999999998653    1     233445668899999999999888664  23589999998776          


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       211 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                       .+.++...|+.||++.+.+++.++.+   .|+++++|+||.|.++..
T Consensus       159 -~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  205 (271)
T 3ek2_A          159 -RAIPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAA  205 (271)
T ss_dssp             -SBCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----
T ss_pred             -cCCCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhh
Confidence             23455789999999999999999987   699999999999998753

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.95  E-value=7.1e-27  Score=207.18  Aligned_cols=184  Identities=14%  Similarity=0.016  Sum_probs=138.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH-HHHHHHhhc-----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA-KAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~v~~~~~~-----  143 (296)
                      +|+||||||+||||++++++|+++|++|++++|+..+..+..+.+.+..  +.++.++.+|++|. ++++++++.     
T Consensus        12 ~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~   89 (311)
T 3o26_A           12 RRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN--HENVVFHQLDVTDPIATMSSLADFIKTHF   89 (311)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT--CCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence            4899999999999999999999999999999987655555555544332  24789999999998 888777754     


Q ss_pred             CCCcEEEEcccccCcC----------------------------------CCCcChHHHHHHHHHHHHHHH----HHHHH
Q 022471          144 NAFDAVMHFAAVAYVG----------------------------------ESTLDPLKYYHNITSNTLVVL----ESMAR  185 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~----------------------------------~~~~~~~~~~~~n~~~t~~ll----~~~~~  185 (296)
                      +++|+||||||+....                                  ...+..++.+++|+.|+..++    +.|++
T Consensus        90 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~  169 (311)
T 3o26_A           90 GKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQL  169 (311)
T ss_dssp             SSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhcc
Confidence            6899999999986421                                  123344567899999965555    44555


Q ss_pred             cCCCEEEEEcccccccCCCC--------------------------------CCCCCCCCCCCCChHHHHHHHHHHHHHH
Q 022471          186 HGVDTLIYSSTCATYGEPEK--------------------------------MPITEETPQAPINPYGKAKKMAEDIILD  233 (296)
Q Consensus       186 ~~~~riV~~SS~~~~g~~~~--------------------------------~~~~e~~~~~~~~~Y~~sK~~~e~~~~~  233 (296)
                      .+.++||++||.+.+.....                                ....+.....+...|+.||++.+.+++.
T Consensus       170 ~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~  249 (311)
T 3o26_A          170 SDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRV  249 (311)
T ss_dssp             SSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHH
Confidence            66789999999876532100                                0011111123457899999999999999


Q ss_pred             hhhc-CCCcEEEEecCeeecCCC
Q 022471          234 FSKN-SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       234 ~~~~-~gi~~~~lrpg~v~Gp~~  255 (296)
                      ++.+ .++++++|+||.|.++..
T Consensus       250 la~e~~~i~v~~v~PG~v~T~~~  272 (311)
T 3o26_A          250 LANKIPKFQVNCVCPGLVKTEMN  272 (311)
T ss_dssp             HHHHCTTSEEEEECCCSBCSGGG
T ss_pred             HHhhcCCceEEEecCCceecCCc
Confidence            9998 479999999999988753

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.95  E-value=6.1e-27  Score=203.37  Aligned_cols=170  Identities=16%  Similarity=0.092  Sum_probs=136.1

Q ss_pred             ccEEEEEcCC--ChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----
Q 022471           70 VTHVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (296)
Q Consensus        70 ~k~vlVTGas--G~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (296)
                      +|+||||||+  ||||++++++|+++|++|++++|+.. ..+..+.+.+..   ..+.++.+|++|.+++++++++    
T Consensus         8 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (261)
T 2wyu_A            8 GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEAL---GGALLFRADVTQDEELDALFAGVKEA   83 (261)
T ss_dssp             TCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHT---TCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhc---CCcEEEECCCCCHHHHHHHHHHHHHH
Confidence            3899999999  99999999999999999999998653 222333333321   2378899999999999888865    


Q ss_pred             -CCCcEEEEcccccCc--------CCCCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCC
Q 022471          144 -NAFDAVMHFAAVAYV--------GESTLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEET  212 (296)
Q Consensus       144 -~~~D~vi~~Ag~~~~--------~~~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~  212 (296)
                       +++|+||||||....        ....++++..+++|+.++.++++++.+.  ..++||++||.+.+.           
T Consensus        84 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------  152 (261)
T 2wyu_A           84 FGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEK-----------  152 (261)
T ss_dssp             HSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTS-----------
T ss_pred             cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccC-----------
Confidence             589999999997642        1234455678899999999999988764  136999999977652           


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       213 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +.++...|+.||++.+.+++.++.+   +|+++++|+||.|+++.
T Consensus       153 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  197 (261)
T 2wyu_A          153 VVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVA  197 (261)
T ss_dssp             BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTG
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCch
Confidence            2344678999999999999999987   49999999999999985

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.94  E-value=1.3e-26  Score=198.40  Aligned_cols=154  Identities=12%  Similarity=0.048  Sum_probs=129.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      |+|+||||+||||++++++|+++|+  +|++++|++.......         ..++.++.+|++|.+++++++  .++|+
T Consensus        19 ~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~---------~~~~~~~~~D~~d~~~~~~~~--~~~d~   87 (242)
T 2bka_A           19 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA---------YKNVNQEVVDFEKLDDYASAF--QGHDV   87 (242)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG---------GGGCEEEECCGGGGGGGGGGG--SSCSE
T ss_pred             CeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc---------cCCceEEecCcCCHHHHHHHh--cCCCE
Confidence            8999999999999999999999999  9999998765433221         135788999999999999988  57999


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e  228 (296)
                      ||||||.....   ...+..+++|+.++.++++++++.+.++||++||.++|+.             +..+|+.+|.++|
T Consensus        88 vi~~ag~~~~~---~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~-------------~~~~Y~~sK~~~e  151 (242)
T 2bka_A           88 GFCCLGTTRGK---AGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS-------------SNFLYLQVKGEVE  151 (242)
T ss_dssp             EEECCCCCHHH---HHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CSSHHHHHHHHHH
T ss_pred             EEECCCccccc---CCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC-------------CcchHHHHHHHHH
Confidence            99999965322   2356788999999999999999998899999999988741             3468999999999


Q ss_pred             HHHHHhhhcCCC-cEEEEecCeeecCCC
Q 022471          229 DIILDFSKNSDM-AVMILRYFNVIGSDP  255 (296)
Q Consensus       229 ~~~~~~~~~~gi-~~~~lrpg~v~Gp~~  255 (296)
                      .+++.    .++ +++++|||.||||..
T Consensus       152 ~~~~~----~~~~~~~~vrpg~v~~~~~  175 (242)
T 2bka_A          152 AKVEE----LKFDRYSVFRPGVLLCDRQ  175 (242)
T ss_dssp             HHHHT----TCCSEEEEEECCEEECTTG
T ss_pred             HHHHh----cCCCCeEEEcCceecCCCC
Confidence            99877    466 699999999999963

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.94  E-value=5.7e-27  Score=204.61  Aligned_cols=166  Identities=21%  Similarity=0.158  Sum_probs=130.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||++++++|+++|++|++++|+....++..   ++.    .++.++.+|++|.+++++++++     +
T Consensus         9 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (270)
T 1yde_A            9 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALE---QEL----PGAVFILCDVTQEDDVKTLVSETIRRFG   81 (270)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HHC----TTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHh----cCCeEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999997643322222   221    2478899999999999988865     5


Q ss_pred             CCcEEEEcccccCc-CC----CCcChHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYV-GE----STLDPLKYYHNITSNTLVVLESMA----RHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~-~~----~~~~~~~~~~~n~~~t~~ll~~~~----~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||.... ..    ..++.+..+++|+.++.++++++.    +. .++||++||...+.           +.+
T Consensus        82 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~-----------~~~  149 (270)
T 1yde_A           82 RLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAI-----------GQA  149 (270)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHH-----------CCT
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccC-----------CCC
Confidence            89999999997542 22    233456688899999777666654    33 47999999976542           223


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.||++.+.+++.++.|   +|+++++|+||+|++|.
T Consensus       150 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~  191 (270)
T 1yde_A          150 QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPL  191 (270)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccch
Confidence            4678999999999999999977   79999999999999974

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.94  E-value=1.8e-26  Score=200.90  Aligned_cols=156  Identities=22%  Similarity=0.254  Sum_probs=133.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+|+||||+||||++++++|++ |++|++++|+....            . .    +.+|++|.++++++++..++|+||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~------------~-~----~~~Dl~~~~~~~~~~~~~~~d~vi   62 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ------------G-G----YKLDLTDFPRLEDFIIKKRPDVII   62 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT------------T-C----EECCTTSHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC------------C-C----ceeccCCHHHHHHHHHhcCCCEEE
Confidence            4799999999999999999994 89999999865210            1 1    789999999999998654699999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  230 (296)
                      ||||........+++...+++|+.++.++++++++.+. +||++||.++|+.... +++|+.+..|.+.|+.+|.++|.+
T Consensus        63 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~~-~~~e~~~~~~~~~Y~~sK~~~e~~  140 (273)
T 2ggs_A           63 NAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEKG-NYKEEDIPNPINYYGLSKLLGETF  140 (273)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSSC-SBCTTSCCCCSSHHHHHHHHHHHH
T ss_pred             ECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCCC-CcCCCCCCCCCCHHHHHHHHHHHH
Confidence            99997654434567788999999999999999998875 9999999999976543 788888888899999999999999


Q ss_pred             HHHhhhcCCCcEEEEecCeeec
Q 022471          231 ILDFSKNSDMAVMILRYFNVIG  252 (296)
Q Consensus       231 ~~~~~~~~gi~~~~lrpg~v~G  252 (296)
                      ++.      ++++++||+.|||
T Consensus       141 ~~~------~~~~~iR~~~v~G  156 (273)
T 2ggs_A          141 ALQ------DDSLIIRTSGIFR  156 (273)
T ss_dssp             HCC------TTCEEEEECCCBS
T ss_pred             HhC------CCeEEEecccccc
Confidence            865      5789999999998

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.94  E-value=1e-26  Score=199.93  Aligned_cols=172  Identities=15%  Similarity=0.162  Sum_probs=136.3

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccC--CCHHHHHHHhhc---
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL--GDAKAVNKFFSE---  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl--~d~~~v~~~~~~---  143 (296)
                      .+|+++||||+||||++++++|+++|++|++++|+..+.++..+.++...  ..+..++.+|+  +|.+++++++++   
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~d~d~~~~~~~~~~~~~~~~   90 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG--QPQPLIIALNLENATAQQYRELAARVEH   90 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--SCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC--CCCceEEEeccccCCHHHHHHHHHHHHH
Confidence            34999999999999999999999999999999987665555555555432  14566777777  999998888765   


Q ss_pred             --CCCcEEEEcccccCc-CC----CCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCC
Q 022471          144 --NAFDAVMHFAAVAYV-GE----STLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEET  212 (296)
Q Consensus       144 --~~~D~vi~~Ag~~~~-~~----~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~  212 (296)
                        +++|+||||||.... ..    ..++..+.+++|+.++..+++++    ++.+.++||++||...+           .
T Consensus        91 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~-----------~  159 (247)
T 3i1j_A           91 EFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGR-----------K  159 (247)
T ss_dssp             HHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGT-----------S
T ss_pred             hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhc-----------C
Confidence              689999999997532 21    33455667899999977666555    55666799999998765           2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc----CCCcEEEEecCeeecC
Q 022471          213 PQAPINPYGKAKKMAEDIILDFSKN----SDMAVMILRYFNVIGS  253 (296)
Q Consensus       213 ~~~~~~~Y~~sK~~~e~~~~~~~~~----~gi~~~~lrpg~v~Gp  253 (296)
                      +.++...|+.||++.+.+++.++.+    .++++++|+||.|.++
T Consensus       160 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~  204 (247)
T 3i1j_A          160 GRANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTG  204 (247)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSH
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCc
Confidence            3445789999999999999999887    5899999999999775

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.94  E-value=2e-26  Score=204.17  Aligned_cols=173  Identities=14%  Similarity=0.107  Sum_probs=137.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCC--CCCceEEEEccCCCHHHHHHHhhc----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP--EPGRLQFIYADLGDAKAVNKFFSE----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (296)
                      +|+|+||||+||||++++++|+++|++|++++|+....++..+.++....  .+.++.++.+|++|.+++++++++    
T Consensus        18 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   97 (303)
T 1yxm_A           18 GQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDT   97 (303)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHH
Confidence            38999999999999999999999999999999875544444444433211  235789999999999999988865    


Q ss_pred             -CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          144 -NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMAR----HGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       144 -~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~----~~~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                       +++|+||||||......    ..++....+++|+.++.++++++.+    .+.++||++||.+ +           .+.
T Consensus        98 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~-----------~~~  165 (303)
T 1yxm_A           98 FGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-K-----------AGF  165 (303)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-T-----------TCC
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-c-----------cCC
Confidence             57999999999754332    2334556789999999988887654    3457999999976 3           123


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ++...|+.+|.+.+.+++.++.+   .|+++++|+||+|+|+.
T Consensus       166 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  208 (303)
T 1yxm_A          166 PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQT  208 (303)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTG
T ss_pred             CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccch
Confidence            34678999999999999999988   48999999999999983

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.94  E-value=1.1e-26  Score=199.20  Aligned_cols=163  Identities=21%  Similarity=0.216  Sum_probs=129.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+++||||+||||++++++|+++|++|++++|+..+   ..+   ++     .+.++.+|++| +++++++++     ++
T Consensus         3 k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~---~~-----~~~~~~~D~~~-~~~~~~~~~~~~~~g~   70 (239)
T 2ekp_A            3 RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQ---SL-----GAVPLPTDLEK-DDPKGLVKRALEALGG   70 (239)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHH---HH-----TCEEEECCTTT-SCHHHHHHHHHHHHTS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHH---hh-----CcEEEecCCch-HHHHHHHHHHHHHcCC
Confidence            799999999999999999999999999999986532   222   22     26788999999 877776653     68


Q ss_pred             CcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHH----HHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~l----l~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +|+||||||.....+    ..+++++.+++|+.++..+    ++.|++.+.++||++||.+.+...         ..++.
T Consensus        71 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~~~~~  141 (239)
T 2ekp_A           71 LHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAG---------GPVPI  141 (239)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------TTSCC
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCC---------CCCCC
Confidence            999999999765433    3344566788999996654    455566677899999998876321         11457


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..|+.||++.+.+++.++.|   +|+++++|+||.|+++.
T Consensus       142 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  181 (239)
T 2ekp_A          142 PAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEF  181 (239)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCch
Confidence            79999999999999999987   59999999999999875

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.94  E-value=4.9e-27  Score=203.46  Aligned_cols=165  Identities=21%  Similarity=0.185  Sum_probs=131.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----CC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NA  145 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~  145 (296)
                      +|++|||||+||||++++++|+++|++|++++|+.   ++..+   +.   +.++.++++|++|.++++++++.    ++
T Consensus         9 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~---~~~~~---~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~g~   79 (257)
T 3tl3_A            9 DAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRG---EDVVA---DL---GDRARFAAADVTDEAAVASALDLAETMGT   79 (257)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSC---HHHHH---HT---CTTEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCch---HHHHH---hc---CCceEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            38999999999999999999999999999999732   22222   22   35789999999999999888764    58


Q ss_pred             CcEEEEcccccCcC--------CCCcChHHHHHHHHHHHHHHHHHHHH------------cCCCEEEEEcccccccCCCC
Q 022471          146 FDAVMHFAAVAYVG--------ESTLDPLKYYHNITSNTLVVLESMAR------------HGVDTLIYSSTCATYGEPEK  205 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~--------~~~~~~~~~~~~n~~~t~~ll~~~~~------------~~~~riV~~SS~~~~g~~~~  205 (296)
                      +|+||||||+....        ...+..++.+++|+.++..+++++.+            .+.++||++||...+     
T Consensus        80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----  154 (257)
T 3tl3_A           80 LRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAF-----  154 (257)
T ss_dssp             EEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC-------
T ss_pred             CCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhc-----
Confidence            99999999975321        34455677899999997776665543            345699999998766     


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          206 MPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       206 ~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                            .+.++...|+.||++.+.+++.++.|   +||++++|+||.|.++.
T Consensus       155 ------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~  200 (257)
T 3tl3_A          155 ------DGQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPL  200 (257)
T ss_dssp             ------CCHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred             ------CCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChh
Confidence                  22334678999999999999999988   68999999999999875

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.94  E-value=1.5e-26  Score=200.81  Aligned_cols=170  Identities=18%  Similarity=0.090  Sum_probs=132.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc------
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------  143 (296)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.++..   +.++.++.+|++|.+++++++++      
T Consensus         5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   81 (260)
T 2qq5_A            5 GQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL---GGQCVPVVCDSSQESEVRSLFEQVDREQQ   81 (260)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH---SSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc---CCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            389999999999999999999999999999998654444444444332   35788999999999998887753      


Q ss_pred             CCCcEEEEccc--cc-----CcC----CCCcChHHHHHHHHHHHH----HHHHHHHHcCCCEEEEEcccccccCCCCCCC
Q 022471          144 NAFDAVMHFAA--VA-----YVG----ESTLDPLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPI  208 (296)
Q Consensus       144 ~~~D~vi~~Ag--~~-----~~~----~~~~~~~~~~~~n~~~t~----~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~  208 (296)
                      +++|+||||||  +.     ...    ...+.....+++|+.++.    .+++.|++.+.++||++||...+.       
T Consensus        82 g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------  154 (260)
T 2qq5_A           82 GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQ-------  154 (260)
T ss_dssp             TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTS-------
T ss_pred             CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcC-------
Confidence            57999999995  32     111    233445567778888864    455666667778999999987762       


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          209 TEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       209 ~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                           ..+...|+.||++.+.+++.++.|   +|+++++|+||.|.++.
T Consensus       155 -----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  198 (260)
T 2qq5_A          155 -----YMFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTEL  198 (260)
T ss_dssp             -----CCSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTT
T ss_pred             -----CCCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHH
Confidence                 123578999999999999999876   69999999999999875

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.94  E-value=1.1e-26  Score=202.50  Aligned_cols=161  Identities=19%  Similarity=0.157  Sum_probs=130.6

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|+||||||+||||++++++|+++|++|++++|+.....              ....+.+|++|.+++++++++     
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~--------------~~~~~~~Dv~~~~~~~~~~~~~~~~~   92 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA--------------ADLHLPGDLREAAYADGLPGAVAAGL   92 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC--------------CSEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--------------hhhccCcCCCCHHHHHHHHHHHHHhc
Confidence            3489999999999999999999999999999988654322              123447999999998887764     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHH----HHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLES----MARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~----~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +++|+||||||+.....    ..++.+..+++|+.++..++++    |++.+.++||++||...+           .+.+
T Consensus        93 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~-----------~~~~  161 (266)
T 3uxy_A           93 GRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGL-----------RPGP  161 (266)
T ss_dssp             SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT-----------BCCT
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhC-----------CCCC
Confidence            68999999999866543    3344556778999997665555    467777899999998776           2344


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.||++.+.+++.++.|   .||++++|+||.|+++.
T Consensus       162 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  203 (266)
T 3uxy_A          162 GHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPM  203 (266)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHH
T ss_pred             CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchH
Confidence            5789999999999999999988   58999999999999874

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.94  E-value=2.5e-26  Score=201.49  Aligned_cols=172  Identities=12%  Similarity=0.013  Sum_probs=137.3

Q ss_pred             CCccEEEEEcCC--ChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc--
Q 022471           68 EGVTHVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--  143 (296)
Q Consensus        68 ~~~k~vlVTGas--G~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~--  143 (296)
                      ..+|+||||||+  +|||++++++|+++|++|++++|+.  ..+..+.+.+.   ..++.++.+|++|.+++++++++  
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~   98 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAE---FNPAAVLPCDVISDQEIKDLFVELG   98 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGG---GCCSEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHh---cCCceEEEeecCCHHHHHHHHHHHH
Confidence            334899999999  6699999999999999999999865  33333333332   24588999999999999988865  


Q ss_pred             ---CCCcEEEEcccccCcC---------CCCcChHHHHHHHHHHHHHHHHHHHHc---CCCEEEEEcccccccCCCCCCC
Q 022471          144 ---NAFDAVMHFAAVAYVG---------ESTLDPLKYYHNITSNTLVVLESMARH---GVDTLIYSSTCATYGEPEKMPI  208 (296)
Q Consensus       144 ---~~~D~vi~~Ag~~~~~---------~~~~~~~~~~~~n~~~t~~ll~~~~~~---~~~riV~~SS~~~~g~~~~~~~  208 (296)
                         +++|+||||||+....         ...+.....+++|+.++..+++++.+.   ..++||++||.+.+        
T Consensus        99 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~--------  170 (280)
T 3nrc_A           99 KVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAE--------  170 (280)
T ss_dssp             HHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGT--------
T ss_pred             HHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccc--------
Confidence               6899999999986531         234455668899999988877766542   35799999998776        


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          209 TEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       209 ~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                         .+.++...|+.||++.+.+++.++.|   .|+++++++||.|.++..
T Consensus       171 ---~~~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  217 (280)
T 3nrc_A          171 ---KAMPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAA  217 (280)
T ss_dssp             ---SCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGG
T ss_pred             ---cCCCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhh
Confidence               34455789999999999999999987   789999999999999763

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.94  E-value=8.1e-27  Score=205.81  Aligned_cols=172  Identities=17%  Similarity=0.129  Sum_probs=135.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEe-cCCCCcchhhhhhhhhCCCCCceEEEEccCCCHH-------------
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVD-NLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK-------------  135 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-------------  135 (296)
                      +|++|||||+||||++++++|+++|++|++++ |+....++..+.++..  .+.++.++++|++|.+             
T Consensus         9 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (291)
T 1e7w_A            9 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNAR--RPNSAITVQADLSNVATAPVSGADGSAPV   86 (291)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--STTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhh--cCCeeEEEEeecCCccccccccccccccc
Confidence            38999999999999999999999999999999 7654444444444311  1357889999999999             


Q ss_pred             ----HHHHHhhc-----CCCcEEEEcccccCcCCC------------------CcChHHHHHHHHHHHHHHHH----HHH
Q 022471          136 ----AVNKFFSE-----NAFDAVMHFAAVAYVGES------------------TLDPLKYYHNITSNTLVVLE----SMA  184 (296)
Q Consensus       136 ----~v~~~~~~-----~~~D~vi~~Ag~~~~~~~------------------~~~~~~~~~~n~~~t~~ll~----~~~  184 (296)
                          ++++++++     +++|+||||||+......                  .+.....+++|+.++..+++    .|+
T Consensus        87 ~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~  166 (291)
T 1e7w_A           87 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA  166 (291)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence                88888765     589999999998654332                  23345678899998666554    454


Q ss_pred             HcC------CCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          185 RHG------VDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       185 ~~~------~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +.+      .++||++||...+           .+.++...|+.||++.+.+++.++.|   +||++++|+||.|..+.
T Consensus       167 ~~~~~~~~~~g~Iv~isS~~~~-----------~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  234 (291)
T 1e7w_A          167 GTPAKHRGTNYSIINMVDAMTN-----------QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD  234 (291)
T ss_dssp             TSCGGGSCSCEEEEEECCTTTT-----------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG
T ss_pred             hcCCCCCCCCcEEEEEechhhc-----------CCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc
Confidence            555      5799999998776           23445789999999999999999987   68999999999998775

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.94  E-value=1.5e-26  Score=207.44  Aligned_cols=174  Identities=19%  Similarity=0.158  Sum_probs=137.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhC---CCCCceEEEEccCCCHHHHHHHhhc---C
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELF---PEPGRLQFIYADLGDAKAVNKFFSE---N  144 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~v~~~~~~---~  144 (296)
                      |+||||||+||||++++++|+++|++|++++|+.++.+...+.++...   ..+.++.++.+|++|.+++++++++   +
T Consensus         3 k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~g   82 (327)
T 1jtv_A            3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG   82 (327)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhcC
Confidence            899999999999999999999999999998876665554444443321   1235788999999999999999875   5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHH----HHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLES----MARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~----~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||+.....    ..++..+.+++|+.++.+++++    |++.+.++||++||.+.+.           +.+.
T Consensus        83 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~-----------~~~~  151 (327)
T 1jtv_A           83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM-----------GLPF  151 (327)
T ss_dssp             CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTS-----------CCTT
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCccccc-----------CCCC
Confidence            7999999999764433    3344566889999997776655    5666778999999987762           2334


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      ...|+.||++++.+++.++.|   +||++++|+||.|.++..
T Consensus       152 ~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~  193 (327)
T 1jtv_A          152 NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFM  193 (327)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC---
T ss_pred             ChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHH
Confidence            678999999999999999986   799999999999998763

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.94  E-value=2.1e-26  Score=198.40  Aligned_cols=160  Identities=18%  Similarity=0.173  Sum_probs=126.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+||||||+||||++++++|+++|++|++++|+....+              .+..+.+|++|.+++++++++     +
T Consensus        15 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~~D~~~~~~~~~~~~~~~~~~g   80 (247)
T 1uzm_A           15 SRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK--------------GLFGVEVDVTDSDAVDRAFTAVEEHQG   80 (247)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT--------------TSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH--------------HhcCeeccCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999998654322              112378999999999888765     6


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHH----HHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLE----SMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~----~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||......    ..++.+..+++|+.++.++++    .|++.+.++||++||...+.           +.++
T Consensus        81 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  149 (247)
T 1uzm_A           81 PVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW-----------GIGN  149 (247)
T ss_dssp             SCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------------C
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhcc-----------CCCC
Confidence            8999999999865332    334556688899999766555    44556778999999976652           2334


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.||++.+.+++.++.|   +|+++++++||.|.++.
T Consensus       150 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  190 (247)
T 1uzm_A          150 QANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDM  190 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccc
Confidence            678999999999999999987   69999999999998763

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.94  E-value=1.6e-26  Score=200.58  Aligned_cols=179  Identities=13%  Similarity=0.125  Sum_probs=137.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+||||||+||||++++++|+++|++|++++|+.....+..+.+.+..  +.++.++.+|++|.+++++++++     +
T Consensus        14 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   91 (265)
T 1h5q_A           14 NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF--GVKTKAYQCDVSNTDIVTKTIQQIDADLG   91 (265)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH--TCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhc--CCeeEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            3899999999999999999999999999999986655443333333221  25688999999999999888765     5


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHH----HcC-CCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMA----RHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~----~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||......    ..+..+..+++|+.++.++++++.    +.+ .++||++||...+.....    ...+..
T Consensus        92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----~~~~~~  167 (265)
T 1h5q_A           92 PISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS----SLNGSL  167 (265)
T ss_dssp             SEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE----ETTEEC
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc----cccccc
Confidence            7999999999865433    334455678899999877766654    334 479999999876532211    012234


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.||++.+.+++.++.+   .|+++++++||.|+++.
T Consensus       168 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  209 (265)
T 1h5q_A          168 TQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQ  209 (265)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGG
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccc
Confidence            5788999999999999999877   58999999999999985

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.94  E-value=1.1e-26  Score=208.33  Aligned_cols=172  Identities=17%  Similarity=0.129  Sum_probs=135.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEe-cCCCCcchhhhhhhhhCCCCCceEEEEccCCCHH-------------
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVD-NLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK-------------  135 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-------------  135 (296)
                      +|+||||||+||||++++++|+++|++|++++ |+....+++.+.+...  .+.++.++.+|++|.+             
T Consensus        46 ~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~  123 (328)
T 2qhx_A           46 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNAR--RPNSAITVQADLSNVATAPVSGADGSAPV  123 (328)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--STTCEEEEECCCSSSCBCC-------CCB
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhh--cCCeEEEEEeeCCCchhcccccccccccc
Confidence            38999999999999999999999999999999 7654444444444311  1357889999999999             


Q ss_pred             ----HHHHHhhc-----CCCcEEEEcccccCcCCC------------------CcChHHHHHHHHHHHHHHHH----HHH
Q 022471          136 ----AVNKFFSE-----NAFDAVMHFAAVAYVGES------------------TLDPLKYYHNITSNTLVVLE----SMA  184 (296)
Q Consensus       136 ----~v~~~~~~-----~~~D~vi~~Ag~~~~~~~------------------~~~~~~~~~~n~~~t~~ll~----~~~  184 (296)
                          ++++++++     +++|+||||||+......                  .+..+..+++|+.++..+++    .|+
T Consensus       124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~  203 (328)
T 2qhx_A          124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA  203 (328)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                88888764     589999999998654332                  23345578899999666554    455


Q ss_pred             HcC------CCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          185 RHG------VDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       185 ~~~------~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +.+      .++||++||...+           .+.++...|+.||++.+.+++.++.|   .||++++|+||.|.++.
T Consensus       204 ~~~~~~~~~~g~IV~isS~~~~-----------~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~  271 (328)
T 2qhx_A          204 GTPAKHRGTNYSIINMVDAMTN-----------QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD  271 (328)
T ss_dssp             HSCGGGSCSCEEEEEECCTTTT-----------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC
T ss_pred             hcCCcCCCCCcEEEEECchhhc-----------cCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc
Confidence            555      6799999998766           23445779999999999999999988   58999999999999886

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.94  E-value=1e-26  Score=198.90  Aligned_cols=160  Identities=16%  Similarity=0.169  Sum_probs=130.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-------
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-------  143 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-------  143 (296)
                      |+||||||+||||++++++|+++|++|++++|+.....             ....++.+|++|.+++++++++       
T Consensus         4 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   70 (236)
T 1ooe_A            4 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-------------DSNILVDGNKNWTEQEQSILEQTASSLQG   70 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-------------SEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-------------cccEEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            89999999999999999999999999999998754321             2356778999999999888764       


Q ss_pred             CCCcEEEEcccccCcCCC-----CcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGES-----TLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~~-----~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      +++|+||||||.......     .+..+..+++|+.++..+++++.+.  ..++||++||...+           .+.++
T Consensus        71 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-----------~~~~~  139 (236)
T 1ooe_A           71 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAM-----------GPTPS  139 (236)
T ss_dssp             CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG-----------SCCTT
T ss_pred             CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhc-----------cCCCC
Confidence            489999999997653322     2344567889999988888877663  23699999998876           23445


Q ss_pred             CChHHHHHHHHHHHHHHhhhcC-----CCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKNS-----DMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~~-----gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.||++.+.+++.++.|.     |+++++++||.|.++.
T Consensus       140 ~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~  182 (236)
T 1ooe_A          140 MIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM  182 (236)
T ss_dssp             BHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcc
Confidence            7799999999999999999875     4999999999999874

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.94  E-value=3.9e-26  Score=198.09  Aligned_cols=173  Identities=15%  Similarity=0.082  Sum_probs=133.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC-CCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      +|++|||||+||||++++++|+++|++|++++++. ...++..+.++   ..+.++.++.+|++|.+++++++++     
T Consensus         8 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (259)
T 3edm_A            8 NRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIE---KLGRSALAIKADLTNAAEVEAAISAAADKF   84 (259)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHH---TTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH---hcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            48999999999999999999999999999985432 22222333332   2346789999999999999988865     


Q ss_pred             CCCcEEEEccccc-CcCC----CCcChHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVA-YVGE----STLDPLKYYHNITSNTLVVLESMARHG--VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       144 ~~~D~vi~~Ag~~-~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~~--~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      +++|+||||||.. ....    ..+..+..+++|+.++..+++++.+.-  .++||++||...+.          .+.++
T Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~----------~~~~~  154 (259)
T 3edm_A           85 GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRD----------GGGPG  154 (259)
T ss_dssp             CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHH----------CCSTT
T ss_pred             CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhcc----------CCCCC
Confidence            6899999999975 2222    333446678999999999998887652  35899999987761          12344


Q ss_pred             CChHHHHHHHHHHHHHHhhhc--CCCcEEEEecCeeecCCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN--SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~--~gi~~~~lrpg~v~Gp~~  255 (296)
                      ...|+.||++.+.+++.++.|  .+|++++++||.|.++..
T Consensus       155 ~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~  195 (259)
T 3edm_A          155 ALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFH  195 (259)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC---
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCccc
Confidence            678999999999999999988  349999999999998753

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.94  E-value=3.3e-26  Score=196.50  Aligned_cols=198  Identities=13%  Similarity=0.097  Sum_probs=140.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (296)
                      +|+|+||||+||||++++++|+++|  ++|++++|+....+++    .+.  .+.++.++.+|++|.+++++++++    
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l----~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL----KSI--KDSRVHVLPLTVTCDKSLDTFVSKVGEI   76 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHH----HTC--CCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHH----Hhc--cCCceEEEEeecCCHHHHHHHHHHHHHh
Confidence            3899999999999999999999999  9999999865444322    222  235789999999999999888864    


Q ss_pred             -C--CCcEEEEcccccC-cCC----CCcChHHHHHHHHHHHHHHHHHH----HHc------C-----CCEEEEEcccccc
Q 022471          144 -N--AFDAVMHFAAVAY-VGE----STLDPLKYYHNITSNTLVVLESM----ARH------G-----VDTLIYSSTCATY  200 (296)
Q Consensus       144 -~--~~D~vi~~Ag~~~-~~~----~~~~~~~~~~~n~~~t~~ll~~~----~~~------~-----~~riV~~SS~~~~  200 (296)
                       +  ++|+||||||... ...    ..+..+..+++|+.++..+++++    ++.      +     .++||++||...+
T Consensus        77 ~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  156 (250)
T 1yo6_A           77 VGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS  156 (250)
T ss_dssp             HGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred             cCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccc
Confidence             2  8999999999865 322    33445567889999977765554    444      4     6899999998776


Q ss_pred             cCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhcC---CCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHH
Q 022471          201 GEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS---DMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGAC  277 (296)
Q Consensus       201 g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~  277 (296)
                      .....    +..+..+...|+.||++.+.+++.++.+.   |+++++++||.|.++.....   ...    ..-.+...+
T Consensus       157 ~~~~~----~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~----~~~~~a~~~  225 (250)
T 1yo6_A          157 ITDNT----SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN---AAL----TVEQSTAEL  225 (250)
T ss_dssp             STTCC----STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------HHHHHHH
T ss_pred             cCCcc----cccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCCC---CCC----CHHHHHHHH
Confidence            33211    11222467789999999999999999884   89999999999998763221   001    112566666


Q ss_pred             HHHHhCC
Q 022471          278 FDAARGI  284 (296)
Q Consensus       278 ~~~~~~~  284 (296)
                      +..+...
T Consensus       226 ~~~~~~~  232 (250)
T 1yo6_A          226 ISSFNKL  232 (250)
T ss_dssp             HHHHTTC
T ss_pred             HHHHhcc
Confidence            6666544

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.94  E-value=8.7e-26  Score=203.75  Aligned_cols=172  Identities=16%  Similarity=0.126  Sum_probs=134.4

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchh----hhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGA----VKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~----~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-  143 (296)
                      .+|+||||||+||||++++++|+++|++|++++|+..+.+++    .+..+++...+.++.++.+|++|.+++++++++ 
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~  123 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKA  123 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence            349999999999999999999999999999999987654321    112222222246789999999999999988875 


Q ss_pred             ----CCCcEEEEcccccCcCCC----CcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCC
Q 022471          144 ----NAFDAVMHFAAVAYVGES----TLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEE  211 (296)
Q Consensus       144 ----~~~D~vi~~Ag~~~~~~~----~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~  211 (296)
                          +++|+||||||+......    .+..+..+++|+.++..+++++    ++.+.++||++||...+...        
T Consensus       124 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~--------  195 (346)
T 3kvo_A          124 IKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV--------  195 (346)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGG--------
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCC--------
Confidence                689999999998654432    3344567889999977766555    55667899999997765211        


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc--CCCcEEEEecCe
Q 022471          212 TPQAPINPYGKAKKMAEDIILDFSKN--SDMAVMILRYFN  249 (296)
Q Consensus       212 ~~~~~~~~Y~~sK~~~e~~~~~~~~~--~gi~~~~lrpg~  249 (296)
                       +..+...|+.||++.+.+++.++.|  .||++++|.||.
T Consensus       196 -~~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~  234 (346)
T 3kvo_A          196 -WFKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKT  234 (346)
T ss_dssp             -GTSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSB
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCC
Confidence             1345779999999999999999988  589999999996

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.94  E-value=9.2e-27  Score=208.34  Aligned_cols=175  Identities=17%  Similarity=0.101  Sum_probs=134.3

Q ss_pred             CCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC-------CCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHH
Q 022471           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS-------RGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF  140 (296)
Q Consensus        68 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~  140 (296)
                      ..+|+||||||+||||++++++|+++|++|++++|+.       +......+..+++...+.++.++.+|++|.++++++
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  104 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL  104 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            3448999999999999999999999999999999861       112222222233322346788999999999999888


Q ss_pred             hhc-----CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHH----HcC------CCEEEEEccccccc
Q 022471          141 FSE-----NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMA----RHG------VDTLIYSSTCATYG  201 (296)
Q Consensus       141 ~~~-----~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~----~~~------~~riV~~SS~~~~g  201 (296)
                      +++     +++|+||||||+.....    ..++.+..+++|+.++..+++++.    +.+      .++||++||...+.
T Consensus       105 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~  184 (322)
T 3qlj_A          105 IQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQ  184 (322)
T ss_dssp             HHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHH
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHcc
Confidence            865     68999999999865433    344556688999999777666553    221      25999999987762


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          202 EPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       202 ~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                                 +..+...|+.||++.+.+++.++.|   +||++++|+|| +..+.
T Consensus       185 -----------~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~  228 (322)
T 3qlj_A          185 -----------GSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRM  228 (322)
T ss_dssp             -----------CBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCC
T ss_pred             -----------CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCcc
Confidence                       3344678999999999999999988   79999999999 76654

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.94  E-value=4.4e-26  Score=200.09  Aligned_cols=167  Identities=12%  Similarity=0.122  Sum_probs=129.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||+||||++++++|+++|++|++++|+....+   +..++.   +.++.++.+|++|.+++++++++     +
T Consensus         5 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~---~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (281)
T 3zv4_A            5 GEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLR---ELEVAH---GGNAVGVVGDVRSLQDQKRAAERCLAAFG   78 (281)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---HHHHHT---BTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHH---HHHHHc---CCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            389999999999999999999999999999997543322   222222   35789999999999999888765     6


Q ss_pred             CCcEEEEcccccCcCC-----CCc----ChHHHHHHHHHHHHHHHHH----HHHcCCCEEEEEcccccccCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE-----STL----DPLKYYHNITSNTLVVLES----MARHGVDTLIYSSTCATYGEPEKMPITEE  211 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~-----~~~----~~~~~~~~n~~~t~~ll~~----~~~~~~~riV~~SS~~~~g~~~~~~~~e~  211 (296)
                      ++|+||||||+.....     ..+    ..+..+++|+.++..++++    |++.+ ++||++||...+           
T Consensus        79 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~-----------  146 (281)
T 3zv4_A           79 KIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGF-----------  146 (281)
T ss_dssp             CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGT-----------
T ss_pred             CCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecchhc-----------
Confidence            8999999999754321     112    2455778999996665544    44544 799999998776           


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc--CCCcEEEEecCeeecCC
Q 022471          212 TPQAPINPYGKAKKMAEDIILDFSKN--SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       212 ~~~~~~~~Y~~sK~~~e~~~~~~~~~--~gi~~~~lrpg~v~Gp~  254 (296)
                      .+..+...|+.||++.+.+++.++.|  .+|++++|+||.|.++.
T Consensus       147 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~  191 (281)
T 3zv4_A          147 YPNGGGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDL  191 (281)
T ss_dssp             SSSSSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--
T ss_pred             cCCCCCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCc
Confidence            23445678999999999999999988  34999999999998875

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.94  E-value=1.5e-26  Score=201.72  Aligned_cols=170  Identities=20%  Similarity=0.169  Sum_probs=135.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEec-CCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN-LSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      +|+||||||+||||++++++|+++|++|++++| +....++..+.++..   +.++.++.+|++|.+++++++++     
T Consensus        21 ~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (274)
T 1ja9_A           21 GKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL---GAQGVAIQADISKPSEVVALFDKAVSHF   97 (274)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc---CCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            389999999999999999999999999999997 332222233333322   35788999999999999888864     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHHc---CCCEEEEEcccccc-cCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARH---GVDTLIYSSTCATY-GEPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~---~~~riV~~SS~~~~-g~~~~~~~~e~~~~~  215 (296)
                      +++|+||||||......    ..+..+..+++|+.++.++++++.+.   + ++||++||.+.+ ..           .+
T Consensus        98 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~-----------~~  165 (274)
T 1ja9_A           98 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTG-----------IP  165 (274)
T ss_dssp             SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCS-----------CC
T ss_pred             CCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCC-----------CC
Confidence            58999999999765332    33344668899999999998887764   4 799999998776 21           23


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.||++.+.+++.++.+   .|+++++++||.++++.
T Consensus       166 ~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~  207 (274)
T 1ja9_A          166 NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDM  207 (274)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccc
Confidence            4678999999999999999887   59999999999998864

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.94  E-value=2.9e-27  Score=197.75  Aligned_cols=163  Identities=17%  Similarity=0.167  Sum_probs=133.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-CCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~v  149 (296)
                      |+|+||||+||||++++++|+++  +|++++|+..+.++..   ++.    .. .++.+|++|.+++++++++ +++|+|
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~---~~~----~~-~~~~~D~~~~~~~~~~~~~~~~id~v   70 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELA---REV----GA-RALPADLADELEAKALLEEAGPLDLL   70 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHH---HHH----TC-EECCCCTTSHHHHHHHHHHHCSEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHH---Hhc----cC-cEEEeeCCCHHHHHHHHHhcCCCCEE
Confidence            58999999999999999999999  9999987543322222   222    11 7889999999999999864 579999


Q ss_pred             EEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHH
Q 022471          150 MHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKK  225 (296)
Q Consensus       150 i~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~  225 (296)
                      |||||......    ..++..+.+++|+.++..+++++++.+.++||++||..+|.           +..+...|+.||.
T Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~Y~~sK~  139 (207)
T 2yut_A           71 VHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYV-----------QVPGFAAYAAAKG  139 (207)
T ss_dssp             EECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHH-----------SSTTBHHHHHHHH
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhcc-----------CCCCcchHHHHHH
Confidence            99999764432    44556778999999999999999776678999999988873           3345789999999


Q ss_pred             HHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          226 MAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       226 ~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +.+.+++.++.+   +|+++++++||.++++.
T Consensus       140 a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~  171 (207)
T 2yut_A          140 ALEAYLEAARKELLREGVHLVLVRLPAVATGL  171 (207)
T ss_dssp             HHHHHHHHHHHHHHTTTCEEEEECCCCBCSGG
T ss_pred             HHHHHHHHHHHHHhhhCCEEEEEecCcccCCC
Confidence            999999999887   79999999999999975

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.94  E-value=5.1e-26  Score=197.90  Aligned_cols=173  Identities=13%  Similarity=0.056  Sum_probs=137.2

Q ss_pred             ccEEEEEcCCCh--hhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----
Q 022471           70 VTHVLVTGGAGY--IGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (296)
Q Consensus        70 ~k~vlVTGasG~--IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (296)
                      +|+||||||+|+  ||++++++|+++|++|++++|+.+..+...+..++. . ..++.++.+|++|.+++++++++    
T Consensus         7 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (266)
T 3oig_A            7 GRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTL-D-RNDSIILPCDVTNDAEIETCFASIKEQ   84 (266)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTS-S-SCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhc-C-CCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence            389999999955  999999999999999999998654333333332222 2 13789999999999999988865    


Q ss_pred             -CCCcEEEEcccccCc----C----CCCcChHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEcccccccCCCCCCCCCCC
Q 022471          144 -NAFDAVMHFAAVAYV----G----ESTLDPLKYYHNITSNTLVVLESMARHG--VDTLIYSSTCATYGEPEKMPITEET  212 (296)
Q Consensus       144 -~~~D~vi~~Ag~~~~----~----~~~~~~~~~~~~n~~~t~~ll~~~~~~~--~~riV~~SS~~~~g~~~~~~~~e~~  212 (296)
                       +++|+||||||....    .    ...+.....+++|+.++..+++++.+.-  .++||++||.+.+           .
T Consensus        85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~-----------~  153 (266)
T 3oig_A           85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGE-----------L  153 (266)
T ss_dssp             HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGT-----------S
T ss_pred             hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEeccccc-----------c
Confidence             689999999998642    1    2334445678899999999888887642  3599999998776           3


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       213 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      +.++...|+.||++.+.+++.++.|   .|+++++|+||.|.++..
T Consensus       154 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  199 (266)
T 3oig_A          154 VMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSA  199 (266)
T ss_dssp             CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGG
T ss_pred             cCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccc
Confidence            3445789999999999999999987   589999999999998753

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.94  E-value=8.4e-26  Score=196.40  Aligned_cols=198  Identities=12%  Similarity=0.097  Sum_probs=146.0

Q ss_pred             CCccEEEEEcCCChhhHHHHHHHHhCC---CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-
Q 022471           68 EGVTHVLVTGGAGYIGSHAALRLLKDS---YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-  143 (296)
Q Consensus        68 ~~~k~vlVTGasG~IG~~la~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-  143 (296)
                      ..+|+||||||+||||++++++|+++|   ++|++++|+....+.+ +.+...   +.++.++.+|++|.+++++++++ 
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~---~~~~~~~~~Dl~~~~~v~~~~~~~   94 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKN---HSNIHILEIDLRNFDAYDKLVADI   94 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHH---CTTEEEEECCTTCGGGHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhcc---CCceEEEEecCCChHHHHHHHHHH
Confidence            345899999999999999999999999   9999999977655433 222222   35789999999999999888864 


Q ss_pred             ----C--CCcEEEEcccccC-cC----CCCcChHHHHHHHHHHHHHHHHHHHH----c------C-----CCEEEEEccc
Q 022471          144 ----N--AFDAVMHFAAVAY-VG----ESTLDPLKYYHNITSNTLVVLESMAR----H------G-----VDTLIYSSTC  197 (296)
Q Consensus       144 ----~--~~D~vi~~Ag~~~-~~----~~~~~~~~~~~~n~~~t~~ll~~~~~----~------~-----~~riV~~SS~  197 (296)
                          +  ++|+||||||+.. ..    ...+.....+++|+.++..+++++.+    .      +     .++||++||.
T Consensus        95 ~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~  174 (267)
T 1sny_A           95 EGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSI  174 (267)
T ss_dssp             HHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCG
T ss_pred             HHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecc
Confidence                2  7999999999865 22    23345566788999997776665543    3      2     4799999998


Q ss_pred             ccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCCCCCCCCCCCcccccccccH
Q 022471          198 ATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRIS  274 (296)
Q Consensus       198 ~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i  274 (296)
                      ..+....        +..+...|+.||++.+.+++.++.+   +|+++++|+||.|.++.....     .+  .....+.
T Consensus       175 ~~~~~~~--------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-----~~--~~~~~~a  239 (267)
T 1sny_A          175 LGSIQGN--------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSS-----AP--LDVPTST  239 (267)
T ss_dssp             GGCSTTC--------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTT-----CS--BCHHHHH
T ss_pred             cccccCC--------CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCCC-----CC--CCHHHHH
Confidence            8763211        1235678999999999999999887   699999999999988753211     00  1112466


Q ss_pred             HHHHHHHhCC
Q 022471          275 GACFDAARGI  284 (296)
Q Consensus       275 ~~~~~~~~~~  284 (296)
                      ..++..+...
T Consensus       240 ~~~~~~~~~~  249 (267)
T 1sny_A          240 GQIVQTISKL  249 (267)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHHhc
Confidence            6666666543

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.94  E-value=2.4e-26  Score=197.29  Aligned_cols=161  Identities=14%  Similarity=0.140  Sum_probs=130.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc------
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------  143 (296)
                      +|+||||||+||||++++++|+++|++|++++|+.....             ....++.+|++|.+++++++++      
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~~D~~~~~~v~~~~~~~~~~~~   73 (241)
T 1dhr_A            7 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-------------SASVIVKMTDSFTEQADQVTAEVGKLLG   73 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-------------SEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-------------CCcEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            389999999999999999999999999999998754321             2356778999999999988864      


Q ss_pred             -CCCcEEEEcccccCcCCC-----CcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 -NAFDAVMHFAAVAYVGES-----TLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 -~~~D~vi~~Ag~~~~~~~-----~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                       +++|+||||||+......     .+..++.+++|+.++..+++++.+.  ..++||++||.+.+.           +.+
T Consensus        74 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  142 (241)
T 1dhr_A           74 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALD-----------GTP  142 (241)
T ss_dssp             TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS-----------CCT
T ss_pred             CCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHcc-----------CCC
Confidence             489999999998653322     2334567889999988888877653  236999999988762           334


Q ss_pred             CCChHHHHHHHHHHHHHHhhhcC-----CCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKNS-----DMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~~-----gi~~~~lrpg~v~Gp~  254 (296)
                      +...|+.||++.+.+++.++.|.     |+++++|+||.|.++.
T Consensus       143 ~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~  186 (241)
T 1dhr_A          143 GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM  186 (241)
T ss_dssp             TBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcc
Confidence            56789999999999999999873     5999999999998763

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.94  E-value=1.1e-26  Score=202.19  Aligned_cols=167  Identities=21%  Similarity=0.182  Sum_probs=133.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+++||||+||||++++++|+++|++|++++|+....+   +..+++   ..++.++.+|++|.+++++++++     +
T Consensus         6 ~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (263)
T 2a4k_A            6 GKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLA---EAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEEFG   79 (263)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---HHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH---HHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999998643322   222222   14688999999999999888765     6


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEcccccccCCCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARHG--VDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~~--~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (296)
                      ++|+||||||+.....    ..++.+..+++|+.++..+++++.+.-  .++||++||.+.++            .++..
T Consensus        80 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~------------~~~~~  147 (263)
T 2a4k_A           80 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLG------------AFGLA  147 (263)
T ss_dssp             CCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCC------------HHHHH
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcC------------CCCcH
Confidence            8999999999865433    223345678899999888887776542  46999999987761            12356


Q ss_pred             hHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          219 PYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       219 ~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      .|+.||++.+.+++.++.|   +|+++++|+||.|+++.
T Consensus       148 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  186 (263)
T 2a4k_A          148 HYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPM  186 (263)
T ss_dssp             HHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCch
Confidence            8999999999999999877   68999999999999985

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.94  E-value=2.1e-26  Score=197.98  Aligned_cols=161  Identities=16%  Similarity=0.182  Sum_probs=132.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHh-CCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc---CC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NA  145 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---~~  145 (296)
                      ||++|||||+||||++++++|++ .|++|++++|+....             ...+.++.+|++|.++++++++.   ++
T Consensus         4 ~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   70 (244)
T 4e4y_A            4 MANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS-------------AENLKFIKADLTKQQDITNVLDIIKNVS   70 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC-------------CTTEEEEECCTTCHHHHHHHHHHTTTCC
T ss_pred             CCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc-------------cccceEEecCcCCHHHHHHHHHHHHhCC
Confidence            58999999999999999999999 789999998764321             14568899999999999988853   48


Q ss_pred             CcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEcccccccCCCCCCCCCCCCCCCCCh
Q 022471          146 FDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARHG--VDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~~--~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~  219 (296)
                      +|+||||||+.....    ..++.+..+++|+.++..+++++.+.-  .++||++||...+           .+.++...
T Consensus        71 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~-----------~~~~~~~~  139 (244)
T 4e4y_A           71 FDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCF-----------IAKPNSFA  139 (244)
T ss_dssp             EEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGT-----------CCCTTBHH
T ss_pred             CCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHc-----------cCCCCCch
Confidence            999999999865433    334455678999999999998887642  2589999998876           33445679


Q ss_pred             HHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          220 YGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       220 Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      |+.||++.+.+++.++.|   +|+++++|+||.|.+|.
T Consensus       140 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  177 (244)
T 4e4y_A          140 YTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDL  177 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchh
Confidence            999999999999999986   68999999999998874

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.94  E-value=1.4e-26  Score=199.48  Aligned_cols=166  Identities=13%  Similarity=0.041  Sum_probs=131.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc--CCCc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--NAFD  147 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~--~~~D  147 (296)
                      ||+||||||+||||++++++|+++|++|++++|+..+..             .   .+.+|++|.+++++++++  +++|
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------------~---~~~~D~~~~~~~~~~~~~~~~~~d   64 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE-------------A---DLSTPGGRETAVAAVLDRCGGVLD   64 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-------------C---CTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc-------------c---cccCCcccHHHHHHHHHHcCCCcc
Confidence            579999999999999999999999999999998654321             0   157899999999998864  4899


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcccccccCCCCCC-CC-------CC----
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMAR----HGVDTLIYSSTCATYGEPEKMP-IT-------EE----  211 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~----~~~~riV~~SS~~~~g~~~~~~-~~-------e~----  211 (296)
                      +||||||....   ...+...+++|+.++.++++++.+    .+.++||++||..+|+.....+ ..       ++    
T Consensus        65 ~vi~~Ag~~~~---~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (255)
T 2dkn_A           65 GLVCCAGVGVT---AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIE  141 (255)
T ss_dssp             EEEECCCCCTT---SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHH
T ss_pred             EEEECCCCCCc---chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhh
Confidence            99999997542   345788999999999888886654    3568999999999886432110 00       00    


Q ss_pred             ---CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          212 ---TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       212 ---~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                         ....+.+.|+.||++++.+++.++.+   .|++++++|||.|+||.
T Consensus       142 ~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~  190 (255)
T 2dkn_A          142 LAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPL  190 (255)
T ss_dssp             HHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHH
T ss_pred             hccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchh
Confidence               01135678999999999999999887   79999999999999974

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.94  E-value=4.8e-26  Score=196.42  Aligned_cols=161  Identities=17%  Similarity=0.152  Sum_probs=126.9

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-CCCc
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFD  147 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D  147 (296)
                      .+|+||||||+||||++++++|+++|++|++++|+.    +   .+++.    ..+.++ +|+  .+++++++++ .++|
T Consensus        18 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~----~---~~~~~----~~~~~~-~D~--~~~~~~~~~~~~~iD   83 (249)
T 1o5i_A           18 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE----E---LLKRS----GHRYVV-CDL--RKDLDLLFEKVKEVD   83 (249)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH----H---HHHHT----CSEEEE-CCT--TTCHHHHHHHSCCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH----H---HHHhh----CCeEEE-eeH--HHHHHHHHHHhcCCC
Confidence            349999999999999999999999999999999854    1   12222    246677 999  4455555544 3899


Q ss_pred             EEEEcccccCcCC----CCcChHHHHHHHHHHHH----HHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCCh
Q 022471          148 AVMHFAAVAYVGE----STLDPLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (296)
Q Consensus       148 ~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~----~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~  219 (296)
                      +||||||......    ..+.....+++|+.++.    .+++.|++.+.++||++||...+.           +.++...
T Consensus        84 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~  152 (249)
T 1o5i_A           84 ILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVIS-----------PIENLYT  152 (249)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCTTBHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcC-----------CCCCCch
Confidence            9999999765433    23445567889998844    567778787778999999988873           3345679


Q ss_pred             HHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          220 YGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       220 Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      |+.||++.+.+++.++.|   +|+++++|+||.|+++.
T Consensus       153 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  190 (249)
T 1o5i_A          153 SNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETER  190 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCc
Confidence            999999999999999887   69999999999999985

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.94  E-value=2.3e-26  Score=191.80  Aligned_cols=151  Identities=11%  Similarity=0.078  Sum_probs=126.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-CCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~v  149 (296)
                      |+|+||||+||||++++++|+ +|++|++++|+..                    ++.+|++|.+++++++++ +++|+|
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~--------------------~~~~D~~~~~~~~~~~~~~~~~d~v   62 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG--------------------DVTVDITNIDSIKKMYEQVGKVDAI   62 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS--------------------SEECCTTCHHHHHHHHHHHCCEEEE
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc--------------------ceeeecCCHHHHHHHHHHhCCCCEE
Confidence            589999999999999999999 9999999997542                    368999999999998865 579999


Q ss_pred             EEcccccCcCCC----CcChHHHHHHHHHHHHHHHHHHHHc---CCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHH
Q 022471          150 MHFAAVAYVGES----TLDPLKYYHNITSNTLVVLESMARH---GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGK  222 (296)
Q Consensus       150 i~~Ag~~~~~~~----~~~~~~~~~~n~~~t~~ll~~~~~~---~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~  222 (296)
                      |||||.......    .+...+.+++|+.++.++++++.+.   + ++||++||...+           .+.++...|+.
T Consensus        63 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~-----------~~~~~~~~Y~~  130 (202)
T 3d7l_A           63 VSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMME-----------DPIVQGASAAM  130 (202)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGT-----------SCCTTCHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhc-----------CCCCccHHHHH
Confidence            999997644332    2334456789999999999998775   4 699999998765           23445689999


Q ss_pred             HHHHHHHHHHHhhhc--CCCcEEEEecCeeecCC
Q 022471          223 AKKMAEDIILDFSKN--SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       223 sK~~~e~~~~~~~~~--~gi~~~~lrpg~v~Gp~  254 (296)
                      ||.+.+.+++.++.+  .|+++++++||+++++.
T Consensus       131 sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~  164 (202)
T 3d7l_A          131 ANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESW  164 (202)
T ss_dssp             HHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGH
T ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCccCCch
Confidence            999999999999987  49999999999999984

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.94  E-value=8.8e-26  Score=198.00  Aligned_cols=154  Identities=17%  Similarity=0.213  Sum_probs=129.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      ||+|||||| |+||++++++|+++|++|++++|+..+...    +.     ..+++++.+|++|.+     +  .++|+|
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~-----~~~~~~~~~D~~d~~-----~--~~~d~v   67 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEA----IR-----ASGAEPLLWPGEEPS-----L--DGVTHL   67 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHH----HH-----HTTEEEEESSSSCCC-----C--TTCCEE
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhh----Hh-----hCCCeEEEecccccc-----c--CCCCEE
Confidence            479999998 999999999999999999999986543221    11     146889999999954     3  579999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHH
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMAR--HGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~--~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~  227 (296)
                      ||+|+.....    .         ..+.++++++++  .++++|||+||.++|+.....+++|+.+..|.++|+.+|.++
T Consensus        68 i~~a~~~~~~----~---------~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~  134 (286)
T 3ius_A           68 LISTAPDSGG----D---------PVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMA  134 (286)
T ss_dssp             EECCCCBTTB----C---------HHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHH
T ss_pred             EECCCccccc----c---------HHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHH
Confidence            9999965432    1         124678888988  678999999999999988877899999999999999999999


Q ss_pred             HHHHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          228 EDIILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       228 e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                      |.+++.+   .+++++++||++||||+..
T Consensus       135 E~~~~~~---~~~~~~ilRp~~v~G~~~~  160 (286)
T 3ius_A          135 EQQWQAV---PNLPLHVFRLAGIYGPGRG  160 (286)
T ss_dssp             HHHHHHS---TTCCEEEEEECEEEBTTBS
T ss_pred             HHHHHhh---cCCCEEEEeccceECCCch
Confidence            9999986   6999999999999999753

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.94  E-value=2.3e-26  Score=198.83  Aligned_cols=167  Identities=10%  Similarity=0.015  Sum_probs=126.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc--CCCc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--NAFD  147 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~--~~~D  147 (296)
                      ||+||||||+||||++++++|+++|++|++++|+..+...               . +.+|++|.+++++++++  +++|
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~---------------~-~~~Dl~~~~~v~~~~~~~~~~id   64 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA---------------D-LSTAEGRKQAIADVLAKCSKGMD   64 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------------C-TTSHHHHHHHHHHHHTTCTTCCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc---------------c-cccCCCCHHHHHHHHHHhCCCCC
Confidence            5899999999999999999999999999999986543220               1 57999999999999865  4789


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCC------------
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEE------------  211 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~------------  211 (296)
                      +||||||....   ....+..+++|+.++.++++++    ++.+.++||++||.+++......+..+.            
T Consensus        65 ~lv~~Ag~~~~---~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (257)
T 1fjh_A           65 GLVLCAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARA  141 (257)
T ss_dssp             EEEECCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHH
T ss_pred             EEEECCCCCCC---cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhh
Confidence            99999997541   2347889999999977765555    4566689999999988732111000000            


Q ss_pred             -----CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          212 -----TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       212 -----~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                           .+.++...|+.||++.+.+++.++.+   +|+++++|+||.|.++..
T Consensus       142 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  193 (257)
T 1fjh_A          142 IVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLL  193 (257)
T ss_dssp             HHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC------
T ss_pred             hhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccc
Confidence                 12234678999999999999999987   799999999999998863

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.94  E-value=7e-26  Score=195.89  Aligned_cols=169  Identities=15%  Similarity=0.161  Sum_probs=124.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHh-hc-CCCc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFF-SE-NAFD  147 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~-~~-~~~D  147 (296)
                      ||++|||||+||||++++++|+++|++|++++|+....+...+ ++..   +.++.++  |..+.+.+.+.+ ++ +++|
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~---~~~~~~~--d~~~v~~~~~~~~~~~g~iD   74 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAET---YPQLKPM--SEQEPAELIEAVTSAYGQVD   74 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHH---CTTSEEC--CCCSHHHHHHHHHHHHSCCC
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhc---CCcEEEE--CHHHHHHHHHHHHHHhCCCC
Confidence            5899999999999999999999999999999987655444333 3332   2344443  555544332222 22 6899


Q ss_pred             EEEEccccc-CcCC----CCcChHHHHHHHHHHHHHHH----HHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCC
Q 022471          148 AVMHFAAVA-YVGE----STLDPLKYYHNITSNTLVVL----ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (296)
Q Consensus       148 ~vi~~Ag~~-~~~~----~~~~~~~~~~~n~~~t~~ll----~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (296)
                      +||||||+. ....    ..++.+..+++|+.++..++    +.|++++.++||++||...+           .+.++..
T Consensus        75 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~~~~~  143 (254)
T 1zmt_A           75 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPF-----------GPWKELS  143 (254)
T ss_dssp             EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTT-----------SCCTTCH
T ss_pred             EEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccc-----------cCCCCch
Confidence            999999986 3332    33445667889999966644    55556677899999998776           2334567


Q ss_pred             hHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          219 PYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       219 ~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      .|+.||++.+.+++.++.+   +|+++++|+||.|+||..
T Consensus       144 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~  183 (254)
T 1zmt_A          144 TYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDS  183 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTC
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccc
Confidence            9999999999999999887   589999999999988753

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.94  E-value=7e-26  Score=195.59  Aligned_cols=173  Identities=18%  Similarity=0.131  Sum_probs=136.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEec-CCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN-LSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      +|+++||||+||||++++++|+++|++|+++++ +....++..+.++.   .+.++.++.+|++|.+++++++++     
T Consensus         7 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (255)
T 3icc_A            7 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQS---NGGSAFSIGANLESLHGVEALYSSLDNEL   83 (255)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHH---TTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHh---cCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence            489999999999999999999999999998754 33223333333332   346788999999999998887754     


Q ss_pred             ------CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCC
Q 022471          144 ------NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEE  211 (296)
Q Consensus       144 ------~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~  211 (296)
                            +++|+||||||+.....    ..+..++.+++|+.++..+++++.+.  +.++||++||.+.+           
T Consensus        84 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~-----------  152 (255)
T 3icc_A           84 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATR-----------  152 (255)
T ss_dssp             HHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGT-----------
T ss_pred             cccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhc-----------
Confidence                  24999999999865443    33344557889999999999888764  34689999998776           


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCCC
Q 022471          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       212 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~~  256 (296)
                      .+.+....|+.||++.+.+++.++.|   .|+++++++||.|.++...
T Consensus       153 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  200 (255)
T 3icc_A          153 ISLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNA  200 (255)
T ss_dssp             SCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSST
T ss_pred             cCCCCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchh
Confidence            23445789999999999999999987   6899999999999988643

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.94  E-value=3.2e-26  Score=216.91  Aligned_cols=202  Identities=18%  Similarity=0.180  Sum_probs=148.4

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcch---hhhhhhhhC------CCCCceEEEEccCCCHHHHHH
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIG---AVKVLQELF------PEPGRLQFIYADLGDAKAVNK  139 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~---~~~~~~~~~------~~~~~~~~~~~Dl~d~~~v~~  139 (296)
                      .+|+||||||||+||++++++|+++|++|++++|+......   ..+.++...      ....++.++.+|++|.+++. 
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence            45899999999999999999999999999999987653221   112121110      01357999999999987777 


Q ss_pred             HhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccC-----CCCCCCCCCCC-
Q 022471          140 FFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGE-----PEKMPITEETP-  213 (296)
Q Consensus       140 ~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~-----~~~~~~~e~~~-  213 (296)
                      +.  .++|+||||||....   .......+++|+.++.++++++.+ +.++|||+||.++ |.     ....+++|+++ 
T Consensus       228 ~~--~~~D~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~  300 (508)
T 4f6l_B          228 LP--ENMDTIIHAGARTDH---FGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADVY  300 (508)
T ss_dssp             CS--SCCSEEEECCCC-----------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCT-TSEECTTCSCCEECTTCSC
T ss_pred             Cc--cCCCEEEECCceecC---CCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhh-ccCCccCCcCccccccccc
Confidence            33  689999999997642   335566788999999999999988 6789999999988 43     23446777765 


Q ss_pred             --CCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCC
Q 022471          214 --QAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII  285 (296)
Q Consensus       214 --~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  285 (296)
                        ..+.+.|+.||.++|.+++.+++ .|++++++||++||||.....+.....      ..+++.+++.+....
T Consensus       301 ~~~~~~~~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp~~v~G~~~~~~~~~~~~------~~~~~~~i~~~~~~~  367 (508)
T 4f6l_B          301 KGQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIK------TNRFSMVMNDLLQLD  367 (508)
T ss_dssp             SSBCCCSHHHHHHHHHHHHHHHHHH-TTCEEEEEEECCEESCSSSCCCCTTCT------TCHHHHHHHHHTTCS
T ss_pred             ccccCCCcHHHHHHHHHHHHHHHHH-cCCCEEEEecceeccCCCCCcccCCcc------hHHHHHHHHHHHHcC
Confidence              34689999999999999999765 799999999999999986543211111      145666666666544

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.94  E-value=1.6e-26  Score=194.79  Aligned_cols=161  Identities=9%  Similarity=0.068  Sum_probs=119.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+||||||||+||++++++|+++|++|++++|++.+.       ..+.   .++.++.+|++|.++  +.+  .++|+||
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-------~~~~---~~~~~~~~D~~d~~~--~~~--~~~d~vi   66 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKI-------TQTH---KDINILQKDIFDLTL--SDL--SDQNVVV   66 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHH-------HHHC---SSSEEEECCGGGCCH--HHH--TTCSEEE
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhh-------hhcc---CCCeEEeccccChhh--hhh--cCCCEEE
Confidence            5799999999999999999999999999999864321       1111   468899999999987  555  6799999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccccccc-CCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYG-EPEKMPITEETPQAPINPYGKAKKMAED  229 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g-~~~~~~~~e~~~~~~~~~Y~~sK~~~e~  229 (296)
                      ||||....         ..+.|+.++++++++|++.+.+++|++||.+++. .....+..|+.+..+.+.|+.+|.+.|.
T Consensus        67 ~~ag~~~~---------~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~  137 (221)
T 3ew7_A           67 DAYGISPD---------EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQ  137 (221)
T ss_dssp             ECCCSSTT---------TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHH
T ss_pred             ECCcCCcc---------ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHH
Confidence            99997422         2456899999999999998889999999987654 3333345566666778889999999999


Q ss_pred             HHHHhhh-cCCCcEEEEecCeeecCCC
Q 022471          230 IILDFSK-NSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       230 ~~~~~~~-~~gi~~~~lrpg~v~Gp~~  255 (296)
                      + ..+.. +.|++++++||+++|||++
T Consensus       138 ~-~~~~~~~~gi~~~ivrp~~v~g~~~  163 (221)
T 3ew7_A          138 L-EHLKSHQAEFSWTYISPSAMFEPGE  163 (221)
T ss_dssp             H-HHHHTTTTTSCEEEEECSSCCCCC-
T ss_pred             H-HHHHhhccCccEEEEeCcceecCCC
Confidence            7 34444 6899999999999999843

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.94  E-value=7.1e-26  Score=193.76  Aligned_cols=158  Identities=20%  Similarity=0.187  Sum_probs=130.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----CCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NAF  146 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~~  146 (296)
                      |+||||||+||||++++++|+++|++|++++|+.. .              .++.++.+|++|.+++++++++    +++
T Consensus         3 k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~--------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   67 (242)
T 1uay_A            3 RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G--------------EDLIYVEGDVTREEDVRRAVARAQEEAPL   67 (242)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S--------------SSSEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c--------------cceEEEeCCCCCHHHHHHHHHHHHhhCCc
Confidence            79999999999999999999999999999998653 1              2357889999999999988864    489


Q ss_pred             cEEEEcccccCcCCCC----c----ChHHHHHHHHHHHHHHHHHHHHc----C---C---CEEEEEcccccccCCCCCCC
Q 022471          147 DAVMHFAAVAYVGEST----L----DPLKYYHNITSNTLVVLESMARH----G---V---DTLIYSSTCATYGEPEKMPI  208 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~----~----~~~~~~~~n~~~t~~ll~~~~~~----~---~---~riV~~SS~~~~g~~~~~~~  208 (296)
                      |+||||||........    +    +..+.+++|+.++.++++++.+.    +   .   ++||++||...+..      
T Consensus        68 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~------  141 (242)
T 1uay_A           68 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG------  141 (242)
T ss_dssp             EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC------
T ss_pred             eEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC------
Confidence            9999999976543222    1    55678899999988887777543    2   1   39999999888732      


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          209 TEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       209 ~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                           .++...|+.||++.+.+++.++.+   .|+++++++||.|+++.
T Consensus       142 -----~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~  185 (242)
T 1uay_A          142 -----QIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPL  185 (242)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHH
T ss_pred             -----CCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchh
Confidence                 345789999999999999999877   59999999999999975

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.94  E-value=3.5e-26  Score=199.05  Aligned_cols=183  Identities=17%  Similarity=0.084  Sum_probs=140.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHh-CCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      +|+||||||+||||++++++|++ +|++|++++|+.....+..+.++..   +.++.++.+|++|.+++++++++     
T Consensus         4 ~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   80 (276)
T 1wma_A            4 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE---GLSPRFHQLDIDDLQSIRALRDFLRKEY   80 (276)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc---CCeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence            48999999999999999999999 9999999998654444444444332   35788999999999999988864     


Q ss_pred             CCCcEEEEcccccCcCCC----CcChHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEcccccccCC-C----------CC
Q 022471          144 NAFDAVMHFAAVAYVGES----TLDPLKYYHNITSNTLVVLESMARHG--VDTLIYSSTCATYGEP-E----------KM  206 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~~----~~~~~~~~~~n~~~t~~ll~~~~~~~--~~riV~~SS~~~~g~~-~----------~~  206 (296)
                      +++|+||||||.......    .++.+..+++|+.++.++++++.+..  .++||++||...+... .          ..
T Consensus        81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~  160 (276)
T 1wma_A           81 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSE  160 (276)
T ss_dssp             SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCS
T ss_pred             CCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcccc
Confidence            489999999998654322    24456689999999999999987652  3599999998776320 0          00


Q ss_pred             CCCCC-------------------CCCCCCChHHHHHHHHHHHHHHhhhc-------CCCcEEEEecCeeecCCC
Q 022471          207 PITEE-------------------TPQAPINPYGKAKKMAEDIILDFSKN-------SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       207 ~~~e~-------------------~~~~~~~~Y~~sK~~~e~~~~~~~~~-------~gi~~~~lrpg~v~Gp~~  255 (296)
                      +++|+                   .+..|.+.|+.||++.+.+++.++.+       .|+++++|+||.|.++..
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~  235 (276)
T 1wma_A          161 TITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMA  235 (276)
T ss_dssp             SCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTT
T ss_pred             ccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcC
Confidence            11111                   11224589999999999999999877       489999999999998763

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.94  E-value=8.2e-26  Score=198.76  Aligned_cols=203  Identities=12%  Similarity=0.061  Sum_probs=145.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+|+||||+||||++++++|+++|++|++++|+....++..+.+.+..  ..++.++.+|++|.+++++++++     +
T Consensus        28 ~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  105 (286)
T 1xu9_A           28 GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG--AASAHYIAGTMEDMTFAEQFVAQAGKLMG  105 (286)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT--CSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC--CCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            4899999999999999999999999999999987654444444443331  13688999999999999888764     5


Q ss_pred             CCcEEEEc-ccccCcCC---CCcChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHF-AAVAYVGE---STLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~-Ag~~~~~~---~~~~~~~~~~~n~~~t~~ll~~~----~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+|||| ||......   ..+.....+++|+.++..+++++    ++. .++||++||.+.+.           +.++
T Consensus       106 ~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~-----------~~~~  173 (286)
T 1xu9_A          106 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKV-----------AYPM  173 (286)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTS-----------CCTT
T ss_pred             CCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCccccc-----------CCCC
Confidence            89999999 56643322   22334567899999977765554    333 47999999987762           3345


Q ss_pred             CChHHHHHHHHHHHHHHhhhc-----CCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN-----SDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~-----~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      ...|+.||++.+.+++.++.|     .++++++++||.|.++.................-.+...+++.+..+++
T Consensus       174 ~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~vA~~i~~~~~~~~~  248 (286)
T 1xu9_A          174 VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQE  248 (286)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGGGGGGCBCHHHHHHHHHHHHHTTCS
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhccccccCCCCCHHHHHHHHHHHHhcCCc
Confidence            789999999999999998876     4899999999999886421000000000001112566777777777665

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.94  E-value=6.1e-26  Score=196.73  Aligned_cols=172  Identities=13%  Similarity=0.100  Sum_probs=135.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHh---CCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc---
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLK---DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~---~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (296)
                      +|++|||||+||||++++++|++   +|++|++++|+....++..+.+....+ +.++.++.+|++|.+++++++++   
T Consensus         6 ~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (259)
T 1oaa_A            6 CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQP-DLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCT-TSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCC-CCeEEEEecCCCCHHHHHHHHHHHHh
Confidence            38999999999999999999999   899999999876544444444433221 25788999999999999887754   


Q ss_pred             ----CCCc--EEEEcccccCc--C-----CCCcChHHHHHHHHHHHHHHHHHHHHc------CCCEEEEEcccccccCCC
Q 022471          144 ----NAFD--AVMHFAAVAYV--G-----ESTLDPLKYYHNITSNTLVVLESMARH------GVDTLIYSSTCATYGEPE  204 (296)
Q Consensus       144 ----~~~D--~vi~~Ag~~~~--~-----~~~~~~~~~~~~n~~~t~~ll~~~~~~------~~~riV~~SS~~~~g~~~  204 (296)
                          +++|  +||||||+...  .     ...++.+..+++|+.++..+++++.+.      +.++||++||.+.+    
T Consensus        85 ~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~----  160 (259)
T 1oaa_A           85 LPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL----  160 (259)
T ss_dssp             SCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT----
T ss_pred             ccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhc----
Confidence                3678  99999997532  1     223455668899999988887777543      34689999998876    


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhcC-CCcEEEEecCeeecC
Q 022471          205 KMPITEETPQAPINPYGKAKKMAEDIILDFSKNS-DMAVMILRYFNVIGS  253 (296)
Q Consensus       205 ~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-gi~~~~lrpg~v~Gp  253 (296)
                             .+.++...|+.||++.+.+++.++.|. ++++++|+||.|..+
T Consensus       161 -------~~~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~  203 (259)
T 1oaa_A          161 -------QPYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDND  203 (259)
T ss_dssp             -------SCCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSH
T ss_pred             -------CCCCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcc
Confidence                   234457899999999999999999884 599999999998765

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.94  E-value=1.4e-25  Score=195.23  Aligned_cols=175  Identities=14%  Similarity=0.040  Sum_probs=137.2

Q ss_pred             CccEEEEEcCC--ChhhHHHHHHHHhCCCeEEEEecCCCCc-chhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc--
Q 022471           69 GVTHVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGN-IGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--  143 (296)
Q Consensus        69 ~~k~vlVTGas--G~IG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~--  143 (296)
                      .+|+|+||||+  +|||++++++|+++|++|++++|+.... ++..+.+.+..  +.++.++++|++|.+++++++++  
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~   96 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTY--GIKAKAYKCQVDSYESCEKLVKDVV   96 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHH--CCCEECCBCCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhc--CCceeEEecCCCCHHHHHHHHHHHH
Confidence            34899999999  9999999999999999999998865543 33344443322  35788999999999999988865  


Q ss_pred             ---CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHH----HHHHcCCCEEEEEcccccccCCCCCCCCCCC
Q 022471          144 ---NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLE----SMARHGVDTLIYSSTCATYGEPEKMPITEET  212 (296)
Q Consensus       144 ---~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~----~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~  212 (296)
                         +++|+||||||+.....    ..++.+..+++|+.++..+++    .|++.+.++||++||...+...         
T Consensus        97 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  167 (267)
T 3gdg_A           97 ADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIAN---------  167 (267)
T ss_dssp             HHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC---------
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccC---------
Confidence               68999999999865443    334455688899999666554    4566777899999997765211         


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhcCC--CcEEEEecCeeecCC
Q 022471          213 PQAPINPYGKAKKMAEDIILDFSKNSD--MAVMILRYFNVIGSD  254 (296)
Q Consensus       213 ~~~~~~~Y~~sK~~~e~~~~~~~~~~g--i~~~~lrpg~v~Gp~  254 (296)
                      ...+...|+.||++.+.+++.++.|.+  +++++++||.|..+.
T Consensus       168 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~  211 (267)
T 3gdg_A          168 FPQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGL  211 (267)
T ss_dssp             SSSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSC
T ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccch
Confidence            113467899999999999999998833  899999999998875

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.93  E-value=1.2e-25  Score=194.03  Aligned_cols=158  Identities=13%  Similarity=0.109  Sum_probs=130.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |+||||||+||||++++++|+++|++|++++|+..+..               ...+.+|++|.+++++++++     ++
T Consensus        23 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~---------------~~~~~~d~~d~~~v~~~~~~~~~~~g~   87 (251)
T 3orf_A           23 KNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA---------------DHSFTIKDSGEEEIKSVIEKINSKSIK   87 (251)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS---------------SEEEECSCSSHHHHHHHHHHHHTTTCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc---------------ccceEEEeCCHHHHHHHHHHHHHHcCC
Confidence            89999999999999999999999999999998754321               23568999999999988865     58


Q ss_pred             CcEEEEcccccCcCC-----CCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGE-----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~-----~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (296)
                      +|+||||||+.....     ..++..+.+++|+.++..+++++.+.  ..++||++||...+           .+.++..
T Consensus        88 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-----------~~~~~~~  156 (251)
T 3orf_A           88 VDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAAL-----------NRTSGMI  156 (251)
T ss_dssp             EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG-----------SCCTTBH
T ss_pred             CCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhc-----------cCCCCCc
Confidence            999999999754322     23445567889999999988888764  23589999998876           3345578


Q ss_pred             hHHHHHHHHHHHHHHhhhc-----CCCcEEEEecCeeecCC
Q 022471          219 PYGKAKKMAEDIILDFSKN-----SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       219 ~Y~~sK~~~e~~~~~~~~~-----~gi~~~~lrpg~v~Gp~  254 (296)
                      .|+.||++.+.+++.++.+     .|+++++|+||.|.++.
T Consensus       157 ~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~  197 (251)
T 3orf_A          157 AYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPT  197 (251)
T ss_dssp             HHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcc
Confidence            9999999999999999988     58999999999998864

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.93  E-value=5.5e-25  Score=199.19  Aligned_cols=167  Identities=20%  Similarity=0.263  Sum_probs=139.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCC-----CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDS-----YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~  145 (296)
                      |+||||||||+||++++++|+++|     ++|++++|+.....     .     ...+++++.+|++|.+++.++++..+
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----~-----~~~~~~~~~~Dl~d~~~~~~~~~~~~   71 (364)
T 2v6g_A            2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----H-----EDNPINYVQCDISDPDDSQAKLSPLT   71 (364)
T ss_dssp             EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----C-----CSSCCEEEECCTTSHHHHHHHHTTCT
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----c-----ccCceEEEEeecCCHHHHHHHHhcCC
Confidence            789999999999999999999999     99999998765432     0     12568899999999999999985433


Q ss_pred             -CcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEE-------EEcccccccCC--CCCCCCCCCC
Q 022471          146 -FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH--GVDTLI-------YSSTCATYGEP--EKMPITEETP  213 (296)
Q Consensus       146 -~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV-------~~SS~~~~g~~--~~~~~~e~~~  213 (296)
                       +|+|||+||...     .++.+.+++|+.++.++++++++.  +.+++|       |+||.++||..  ...+++|+.+
T Consensus        72 ~~d~vih~a~~~~-----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~  146 (364)
T 2v6g_A           72 DVTHVFYVTWANR-----STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLP  146 (364)
T ss_dssp             TCCEEEECCCCCC-----SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSC
T ss_pred             CCCEEEECCCCCc-----chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCcccc
Confidence             999999999652     367789999999999999999987  788998       79999999875  3457788876


Q ss_pred             CCC-CChHHHHHHHHHHHHHHhhhcCC-CcEEEEecCeeecCCCC
Q 022471          214 QAP-INPYGKAKKMAEDIILDFSKNSD-MAVMILRYFNVIGSDPE  256 (296)
Q Consensus       214 ~~~-~~~Y~~sK~~~e~~~~~~~~~~g-i~~~~lrpg~v~Gp~~~  256 (296)
                      ..+ .+.|    .++|.+++.++++++ ++++++||++||||++.
T Consensus       147 ~~~~~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~  187 (364)
T 2v6g_A          147 RLKYMNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPY  187 (364)
T ss_dssp             CCSSCCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTT
T ss_pred             CCccchhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCC
Confidence            654 6778    458888888887777 99999999999999864

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.93  E-value=9.6e-26  Score=197.75  Aligned_cols=169  Identities=17%  Similarity=0.164  Sum_probs=133.1

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----C
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----N  144 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~  144 (296)
                      .+|+||||||+||||++++++|+++|++|++++|+....++..   +++   +.++.++.+|++|.+++++++++    +
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~---~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALA---DEL---GNRAEFVSTNVTSEDSVLAAIEAANQLG  102 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HHH---CTTEEEEECCTTCHHHHHHHHHHHTTSS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH---HHh---CCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            3489999999999999999999999999999998654333332   233   35789999999999999988864    5


Q ss_pred             CCcEEEEc-ccccCcCC---------CCcChHHHHHHHHHHHHHHHHHHH----H------cCCCEEEEEcccccccCCC
Q 022471          145 AFDAVMHF-AAVAYVGE---------STLDPLKYYHNITSNTLVVLESMA----R------HGVDTLIYSSTCATYGEPE  204 (296)
Q Consensus       145 ~~D~vi~~-Ag~~~~~~---------~~~~~~~~~~~n~~~t~~ll~~~~----~------~~~~riV~~SS~~~~g~~~  204 (296)
                      ++|+|||| ||......         ..+...+.+++|+.++.++++++.    +      .+.++||++||.+.+    
T Consensus       103 ~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~----  178 (281)
T 3ppi_A          103 RLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGY----  178 (281)
T ss_dssp             EEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGT----
T ss_pred             CCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEeccccc----
Confidence            79999999 55433221         222356788999999777666554    3      345699999998876    


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          205 KMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       205 ~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                             .+.++...|+.||++.+.+++.++.|   .|+++++|+||.|.++.
T Consensus       179 -------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  224 (281)
T 3ppi_A          179 -------EGQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPI  224 (281)
T ss_dssp             -------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             -------CCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchh
Confidence                   33445789999999999999999988   58999999999998763

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.93  E-value=1.2e-25  Score=192.99  Aligned_cols=162  Identities=17%  Similarity=0.185  Sum_probs=128.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhC--CCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      +|+|+||||+|+||++++++|+++  |++|++++|++.+.       +..   ..++.++.+|++|.+++++++  .++|
T Consensus         4 ~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~-------~~~---~~~~~~~~~D~~d~~~~~~~~--~~~d   71 (253)
T 1xq6_A            4 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK-------EKI---GGEADVFIGDITDADSINPAF--QGID   71 (253)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHH-------HHT---TCCTTEEECCTTSHHHHHHHH--TTCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCch-------hhc---CCCeeEEEecCCCHHHHHHHH--cCCC
Confidence            489999999999999999999999  89999999854221       111   246788999999999999999  5799


Q ss_pred             EEEEcccccCcCC-------------CCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          148 AVMHFAAVAYVGE-------------STLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       148 ~vi~~Ag~~~~~~-------------~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                      +||||||......             ..+.....+++|+.++.++++++++.+.++||++||.+++...        .+.
T Consensus        72 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~--------~~~  143 (253)
T 1xq6_A           72 ALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPD--------HPL  143 (253)
T ss_dssp             EEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTT--------CGG
T ss_pred             EEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCC--------Ccc
Confidence            9999999753211             1122235789999999999999999998999999998875211        111


Q ss_pred             CC--CChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCC
Q 022471          215 AP--INPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       215 ~~--~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                      .+  .+.|+.+|.++|.+++.    .|++++++|||.+||+..
T Consensus       144 ~~~~~~~y~~sK~~~e~~~~~----~~i~~~~vrpg~v~~~~~  182 (253)
T 1xq6_A          144 NKLGNGNILVWKRKAEQYLAD----SGTPYTIIRAGGLLDKEG  182 (253)
T ss_dssp             GGGGGCCHHHHHHHHHHHHHT----SSSCEEEEEECEEECSCS
T ss_pred             ccccchhHHHHHHHHHHHHHh----CCCceEEEecceeecCCc
Confidence            11  24588999999998864    799999999999999864

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.93  E-value=1.1e-24  Score=181.42  Aligned_cols=152  Identities=16%  Similarity=0.237  Sum_probs=125.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+|+||||+|+||++++++|+++|++|++++|++.+....         ...++.++.+|++|.+++.+++  .++|+||
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~~D~~~~~~~~~~~--~~~d~vi   72 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE---------GPRPAHVVVGDVLQAADVDKTV--AGQDAVI   72 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS---------SCCCSEEEESCTTSHHHHHHHH--TTCSEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc---------cCCceEEEEecCCCHHHHHHHH--cCCCEEE
Confidence            7899999999999999999999999999999865432211         0256889999999999999999  5799999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  230 (296)
                      ||||.....    ++   .++|+.++.++++++++.+.++||++||..+|+.....+       .+...|+.+|.++|.+
T Consensus        73 ~~a~~~~~~----~~---~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~-------~~~~~y~~~K~~~e~~  138 (206)
T 1hdo_A           73 VLLGTRNDL----SP---TTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVP-------PRLQAVTDDHIRMHKV  138 (206)
T ss_dssp             ECCCCTTCC----SC---CCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSC-------GGGHHHHHHHHHHHHH
T ss_pred             ECccCCCCC----Cc---cchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCccccc-------ccchhHHHHHHHHHHH
Confidence            999975431    11   247899999999999999999999999999886433211       1567899999999999


Q ss_pred             HHHhhhcCCCcEEEEecCeee
Q 022471          231 ILDFSKNSDMAVMILRYFNVI  251 (296)
Q Consensus       231 ~~~~~~~~gi~~~~lrpg~v~  251 (296)
                      ++.    .+++++++||+.++
T Consensus       139 ~~~----~~i~~~~lrp~~~~  155 (206)
T 1hdo_A          139 LRE----SGLKYVAVMPPHIG  155 (206)
T ss_dssp             HHH----TCSEEEEECCSEEE
T ss_pred             HHh----CCCCEEEEeCCccc
Confidence            864    79999999999983

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.93  E-value=7.4e-26  Score=190.10  Aligned_cols=150  Identities=16%  Similarity=0.123  Sum_probs=128.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      |+|+||||+|+||++++++|+++|+  +|++++|++...             ..++.++.+|++|.+++.+++    +|+
T Consensus         6 ~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~-------------~~~~~~~~~D~~~~~~~~~~~----~d~   68 (215)
T 2a35_A            6 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE-------------HPRLDNPVGPLAELLPQLDGS----IDT   68 (215)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC-------------CTTEECCBSCHHHHGGGCCSC----CSE
T ss_pred             ceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCccc-------------CCCceEEeccccCHHHHHHhh----hcE
Confidence            7999999999999999999999998  999999865430             246778899999988877765    899


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e  228 (296)
                      ||||||....  ..++..+.+++|+.++.++++++++.+.++||++||..+|+             .+.++|+.+|.++|
T Consensus        69 vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~-------------~~~~~y~~sK~~~e  133 (215)
T 2a35_A           69 AFCCLGTTIK--EAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA-------------KSSIFYNRVKGELE  133 (215)
T ss_dssp             EEECCCCCHH--HHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT-------------TCSSHHHHHHHHHH
T ss_pred             EEECeeeccc--cCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCC-------------CCccHHHHHHHHHH
Confidence            9999996532  23467788999999999999999999989999999988873             13578999999999


Q ss_pred             HHHHHhhhcCCCc-EEEEecCeeecCCCC
Q 022471          229 DIILDFSKNSDMA-VMILRYFNVIGSDPE  256 (296)
Q Consensus       229 ~~~~~~~~~~gi~-~~~lrpg~v~Gp~~~  256 (296)
                      .+++.    .+++ ++++||+++|||...
T Consensus       134 ~~~~~----~~~~~~~~vrp~~v~g~~~~  158 (215)
T 2a35_A          134 QALQE----QGWPQLTIARPSLLFGPREE  158 (215)
T ss_dssp             HHHTT----SCCSEEEEEECCSEESTTSC
T ss_pred             HHHHH----cCCCeEEEEeCceeeCCCCc
Confidence            99876    5899 999999999999754

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.93  E-value=1.5e-25  Score=190.08  Aligned_cols=151  Identities=17%  Similarity=0.127  Sum_probs=126.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-CCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~  148 (296)
                      +|++|||||+||||++++++|+++|++|++++|+..                       +|++|.+++++++++ +++|+
T Consensus         6 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-----------------------~D~~~~~~v~~~~~~~g~id~   62 (223)
T 3uce_A            6 KTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG-----------------------LDISDEKSVYHYFETIGAFDH   62 (223)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT-----------------------CCTTCHHHHHHHHHHHCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc-----------------------cCCCCHHHHHHHHHHhCCCCE
Confidence            389999999999999999999999999999986421                       899999999999876 68999


Q ss_pred             EEEcccccC-cCC----CCcChHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEcccccccCCCCCCCCCCCCCCCCChHH
Q 022471          149 VMHFAAVAY-VGE----STLDPLKYYHNITSNTLVVLESMARHG--VDTLIYSSTCATYGEPEKMPITEETPQAPINPYG  221 (296)
Q Consensus       149 vi~~Ag~~~-~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~~--~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~  221 (296)
                      ||||||... ..+    ..++.+..+++|+.++..+++++.+.-  .++||++||...+           .+.++...|+
T Consensus        63 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~-----------~~~~~~~~Y~  131 (223)
T 3uce_A           63 LIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSR-----------KVVANTYVKA  131 (223)
T ss_dssp             EEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGT-----------SCCTTCHHHH
T ss_pred             EEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhc-----------cCCCCchHHH
Confidence            999999762 222    334455678899999999998887642  3589999998876           2345578999


Q ss_pred             HHHHHHHHHHHHhhhcCC-CcEEEEecCeeecCC
Q 022471          222 KAKKMAEDIILDFSKNSD-MAVMILRYFNVIGSD  254 (296)
Q Consensus       222 ~sK~~~e~~~~~~~~~~g-i~~~~lrpg~v~Gp~  254 (296)
                      .||++.+.+++.++.|.+ +++++++||.|.+|.
T Consensus       132 asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~  165 (223)
T 3uce_A          132 AINAAIEATTKVLAKELAPIRVNAISPGLTKTEA  165 (223)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGG
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchh
Confidence            999999999999999843 999999999999875

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.93  E-value=8.7e-25  Score=184.82  Aligned_cols=154  Identities=15%  Similarity=0.182  Sum_probs=121.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHH-hCCCeEEEEecCCC-CcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLL-KDSYRVTIVDNLSR-GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~-~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      ||+|+||||+|+||++++++|+ ++|++|++++|++. ..++..    .   ...++.++.+|++|.+++++++  .++|
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~---~~~~~~~~~~D~~d~~~~~~~~--~~~d   75 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----I---DHERVTVIEGSFQNPGXLEQAV--TNAE   75 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----H---TSTTEEEEECCTTCHHHHHHHH--TTCS
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----c---CCCceEEEECCCCCHHHHHHHH--cCCC
Confidence            3669999999999999999999 89999999998643 322211    0   1357899999999999999999  5799


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCC-hHHHHHHH
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN-PYGKAKKM  226 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~-~Y~~sK~~  226 (296)
                      +||||||..               |+. +++++++|++.+.++||++||..+|+..+.. ..+.. ..... .|+.+|.+
T Consensus        76 ~vv~~ag~~---------------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~-~~~~~-~~~~~~~y~~~K~~  137 (221)
T 3r6d_A           76 VVFVGAMES---------------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVA-LEKWT-FDNLPISYVQGERQ  137 (221)
T ss_dssp             EEEESCCCC---------------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHH-HHHHH-HHTSCHHHHHHHHH
T ss_pred             EEEEcCCCC---------------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcc-ccccc-ccccccHHHHHHHH
Confidence            999999853               344 8999999999999999999999988543210 00000 01123 89999999


Q ss_pred             HHHHHHHhhhcCCCcEEEEecCeeecCC
Q 022471          227 AEDIILDFSKNSDMAVMILRYFNVIGSD  254 (296)
Q Consensus       227 ~e~~~~~~~~~~gi~~~~lrpg~v~Gp~  254 (296)
                      +|.+++.    .|+++++||||.++++.
T Consensus       138 ~e~~~~~----~~i~~~~vrpg~v~~~~  161 (221)
T 3r6d_A          138 ARNVLRE----SNLNYTILRLTWLYNDP  161 (221)
T ss_dssp             HHHHHHH----SCSEEEEEEECEEECCT
T ss_pred             HHHHHHh----CCCCEEEEechhhcCCC
Confidence            9998875    79999999999999983

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.92  E-value=1.1e-25  Score=193.49  Aligned_cols=165  Identities=17%  Similarity=0.108  Sum_probs=111.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHH---Hhhc-CC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNK---FFSE-NA  145 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~---~~~~-~~  145 (296)
                      +|+||||||+||||++++++|++ |++|++++|+....+    .+.+    ..++.++.+|+++.++.+.   .+++ ++
T Consensus         5 ~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~----~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   75 (245)
T 3e9n_A            5 KKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLA----ALAE----IEGVEPIESDIVKEVLEEGGVDKLKNLDH   75 (245)
T ss_dssp             -CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHH----HHHT----STTEEEEECCHHHHHHTSSSCGGGTTCSC
T ss_pred             CCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHH----HHHh----hcCCcceecccchHHHHHHHHHHHHhcCC
Confidence            38999999999999999999988 999999997543222    1111    1468899999998865222   2222 58


Q ss_pred             CcEEEEcccccCcCCCC----cChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~~~----~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +|+||||||+.......    +..+..+++|+.++..    +++.+++.+ ++||++||.+.+.           +.++.
T Consensus        76 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~-----------~~~~~  143 (245)
T 3e9n_A           76 VDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNG-----------PHPGN  143 (245)
T ss_dssp             CSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC---------------------C
T ss_pred             CCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCccccc-----------CCCCc
Confidence            99999999986554422    3345578899999554    555555655 7999999988763           34457


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      ..|+.||++.+.+++.++.+   .|+++++++||.|.++..
T Consensus       144 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  184 (245)
T 3e9n_A          144 TIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPML  184 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchh
Confidence            89999999999999999987   689999999999999853

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.92  E-value=4.9e-25  Score=192.13  Aligned_cols=167  Identities=11%  Similarity=0.047  Sum_probs=131.3

Q ss_pred             ccEEEEEcC--CChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----
Q 022471           70 VTHVLVTGG--AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (296)
Q Consensus        70 ~k~vlVTGa--sG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (296)
                      +|+++||||  +||||++++++|+++|++|++++|+..+   ..+.+.+..  +.++.++.+|++|.+++++++++    
T Consensus         7 ~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (269)
T 2h7i_A            7 GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLR---LIQRITDRL--PAKAPLLELDVQNEEHLASLAGRVTEA   81 (269)
T ss_dssp             TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHH---HHHHHHTTS--SSCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHH---HHHHHHHhc--CCCceEEEccCCCHHHHHHHHHHHHHH
Confidence            389999999  9999999999999999999999975422   112222221  24678899999999999988865    


Q ss_pred             -C---CCcEEEEcccccCc-----CC----CCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCC
Q 022471          144 -N---AFDAVMHFAAVAYV-----GE----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPI  208 (296)
Q Consensus       144 -~---~~D~vi~~Ag~~~~-----~~----~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~  208 (296)
                       +   ++|+||||||+...     .+    ..++....+++|+.++..+++++.+.  ..++||++||...+        
T Consensus        82 ~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~--------  153 (269)
T 2h7i_A           82 IGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSR--------  153 (269)
T ss_dssp             HCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSS--------
T ss_pred             hCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcccc--------
Confidence             4   89999999997641     12    33445567889999999988888653  12599999996543        


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecC
Q 022471          209 TEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGS  253 (296)
Q Consensus       209 ~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp  253 (296)
                          +.+....|+.||++.+.+++.++.|   +|+++++|+||.|.++
T Consensus       154 ----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~  197 (269)
T 2h7i_A          154 ----AMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTL  197 (269)
T ss_dssp             ----CCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCH
T ss_pred             ----ccCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccch
Confidence                2234678999999999999999987   6999999999999876

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.92  E-value=9.5e-25  Score=194.98  Aligned_cols=167  Identities=18%  Similarity=0.139  Sum_probs=124.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC------CCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS------RGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~  143 (296)
                      +|+||||||+||||++++++|+++|++|+++++..      ++.+...+..+++...+..   ..+|++|.+++++++++
T Consensus         9 gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~---~~~D~~~~~~~~~~~~~   85 (319)
T 1gz6_A            9 GRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK---AVANYDSVEAGEKLVKT   85 (319)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCE---EEEECCCGGGHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCe---EEEeCCCHHHHHHHHHH
Confidence            38999999999999999999999999999987531      1222222222222111222   35899999877776543


Q ss_pred             -----CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCC
Q 022471          144 -----NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (296)
Q Consensus       144 -----~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e  210 (296)
                           +++|+||||||+.....    ..+..+..+++|+.++..    +++.|++.+.++||++||.+.+.         
T Consensus        86 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~---------  156 (319)
T 1gz6_A           86 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIY---------  156 (319)
T ss_dssp             HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH---------
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcc---------
Confidence                 68999999999865432    344556788999999555    45555667778999999975531         


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCee
Q 022471          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNV  250 (296)
Q Consensus       211 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v  250 (296)
                        +..+...|+.||++.+.+++.++.+   +||++++|+||.+
T Consensus       157 --~~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~  197 (319)
T 1gz6_A          157 --GNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG  197 (319)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred             --CCCCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc
Confidence              1224678999999999999999987   5899999999987

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.92  E-value=1.1e-24  Score=206.74  Aligned_cols=162  Identities=15%  Similarity=0.126  Sum_probs=129.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +|+||||||||+||++++++|+++|++|++++|+..+.                 ..+.+|+.+.  +.+++  .++|+|
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~-----------------~~v~~d~~~~--~~~~l--~~~D~V  205 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP-----------------GKRFWDPLNP--ASDLL--DGADVL  205 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT-----------------TCEECCTTSC--CTTTT--TTCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc-----------------cceeecccch--hHHhc--CCCCEE
Confidence            48999999999999999999999999999999865432                 1246777643  34444  579999


Q ss_pred             EEcccccCcC-CCCcChHHHHHHHHHHHHHHHHH-HHHcCCCEEEEEccccccc-CCCCCCCCCCCCCCCCChHHHHHHH
Q 022471          150 MHFAAVAYVG-ESTLDPLKYYHNITSNTLVVLES-MARHGVDTLIYSSTCATYG-EPEKMPITEETPQAPINPYGKAKKM  226 (296)
Q Consensus       150 i~~Ag~~~~~-~~~~~~~~~~~~n~~~t~~ll~~-~~~~~~~riV~~SS~~~~g-~~~~~~~~e~~~~~~~~~Y~~sK~~  226 (296)
                      |||||..... ...+.....+++|+.++.+++++ +++.++++|||+||.++|| .....+++|+.+. +.+.|+.+|..
T Consensus       206 ih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~-~~~~y~~~~~~  284 (516)
T 3oh8_A          206 VHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESES-GDDFLAEVCRD  284 (516)
T ss_dssp             EECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCC-CSSHHHHHHHH
T ss_pred             EECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCC-CcChHHHHHHH
Confidence            9999975432 24456677899999999999999 5566788999999999998 4555577887766 78899999999


Q ss_pred             HHHHHHHhhhcCCCcEEEEecCeeecCC
Q 022471          227 AEDIILDFSKNSDMAVMILRYFNVIGSD  254 (296)
Q Consensus       227 ~e~~~~~~~~~~gi~~~~lrpg~v~Gp~  254 (296)
                      .|.+...+ .+.|++++++||++||||+
T Consensus       285 ~E~~~~~~-~~~gi~~~ilRp~~v~Gp~  311 (516)
T 3oh8_A          285 WEHATAPA-SDAGKRVAFIRTGVALSGR  311 (516)
T ss_dssp             HHHTTHHH-HHTTCEEEEEEECEEEBTT
T ss_pred             HHHHHHHH-HhCCCCEEEEEeeEEECCC
Confidence            99877554 4479999999999999987

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.92  E-value=9.2e-25  Score=198.60  Aligned_cols=156  Identities=17%  Similarity=0.244  Sum_probs=133.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      |+||||||||+||++++++|+++|+ +|++++|+                            +|.++++++++  ++|+|
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~----------------------------~d~~~l~~~~~--~~d~V   50 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ----------------------------TKEEELESALL--KADFI   50 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT----------------------------CCHHHHHHHHH--HCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC----------------------------CCHHHHHHHhc--cCCEE
Confidence            5799999999999999999999999 88776542                            67888888884  59999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e  228 (296)
                      ||+||....    +++.+.++.|+.++.++++++++.+.+ +||++||..+|+               .++|+.+|.++|
T Consensus        51 ih~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~---------------~~~Y~~sK~~~E  111 (369)
T 3st7_A           51 VHLAGVNRP----EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ---------------DNPYGESKLQGE  111 (369)
T ss_dssp             EECCCSBCT----TCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS---------------CSHHHHHHHHHH
T ss_pred             EECCcCCCC----CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC---------------CCCchHHHHHHH
Confidence            999997643    245567788999999999999999877 999999999884               578999999999


Q ss_pred             HHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          229 DIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       229 ~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      .+++.++++.|++++++||++||||+..+.           ...+++.+++.+..+++
T Consensus       112 ~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~-----------~~~~~~~~~~~~~~~~~  158 (369)
T 3st7_A          112 QLLREYAEEYGNTVYIYRWPNLFGKWCKPN-----------YNSVIATFCYKIARNEE  158 (369)
T ss_dssp             HHHHHHHHHHCCCEEEEEECEEECTTCCTT-----------SSCHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHhCCCEEEEECCceeCCCCCCC-----------cchHHHHHHHHHHcCCC
Confidence            999999998999999999999999975432           12688888888888776

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.92  E-value=1.4e-24  Score=186.62  Aligned_cols=165  Identities=13%  Similarity=0.138  Sum_probs=119.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEE-e--cCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHH-HHHhhc-C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIV-D--NLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAV-NKFFSE-N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v-~~~~~~-~  144 (296)
                      +|++|||||+||||++++++|+++|++|+++ +  |+....++..   +++  .  .....  |..+.+.+ +++.+. +
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~---~~~--~--~~~~~--~~~~v~~~~~~~~~~~g   71 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFE---SEN--P--GTIAL--AEQKPERLVDATLQHGE   71 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHH---HHS--T--TEEEC--CCCCGGGHHHHHGGGSS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHH---HHh--C--CCccc--CHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999998 5  7543322222   222  1  11211  44443322 222222 6


Q ss_pred             CCcEEEEcccccCc---CC----CCcChHHHHHHHHHHHHHH----HHHHHHcCCCEEEEEcccccccCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYV---GE----STLDPLKYYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~---~~----~~~~~~~~~~~n~~~t~~l----l~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~  213 (296)
                      ++|+||||||+...   ..    ..++.+..+++|+.++..+    ++.|++.+.++||++||...+.           +
T Consensus        72 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------~  140 (244)
T 1zmo_A           72 AIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKK-----------P  140 (244)
T ss_dssp             CEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS-----------C
T ss_pred             CCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCC-----------C
Confidence            89999999998654   33    2334456788999996664    4555566778999999987762           3


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       214 ~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      .++...|+.||++.+.+++.++.|   +|+++++|+||.|.++.
T Consensus       141 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  184 (244)
T 1zmo_A          141 LAYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPT  184 (244)
T ss_dssp             CTTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTT
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCc
Confidence            345778999999999999999887   68999999999998875

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.91  E-value=1.3e-23  Score=195.88  Aligned_cols=170  Identities=14%  Similarity=0.022  Sum_probs=134.3

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|++|||||+||||++++++|+++|++|++++|+.. .++..+..++.     ++.++.+|++|.+++++++++     
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~-~~~l~~~~~~~-----~~~~~~~Dvtd~~~v~~~~~~~~~~~  285 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGA-AEDLKRVADKV-----GGTALTLDVTADDAVDKITAHVTEHH  285 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGG-HHHHHHHHHHH-----TCEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCcc-HHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHHHc
Confidence            3489999999999999999999999999999987432 22222222222     356899999999999988865     


Q ss_pred             C-CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHHc----CCCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          144 N-AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARH----GVDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       144 ~-~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~----~~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                      + ++|+||||||+.....    ..+..+..+++|+.++.++.+++.+.    +.++||++||.+.+.           +.
T Consensus       286 g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~-----------g~  354 (454)
T 3u0b_A          286 GGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIA-----------GN  354 (454)
T ss_dssp             TTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHH-----------CC
T ss_pred             CCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCC-----------CC
Confidence            3 4999999999865443    34445567889999999999888765    567999999987652           23


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      .+...|+.||.+.+.+++.++.+   .|+++++|+||.|.++..
T Consensus       355 ~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  398 (454)
T 3u0b_A          355 RGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMT  398 (454)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC---
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhh
Confidence            44789999999999999999977   799999999999988753

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.91  E-value=1.1e-23  Score=197.70  Aligned_cols=173  Identities=20%  Similarity=0.156  Sum_probs=140.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~  145 (296)
                      +++|||||+||||++++++|+++|+ +|++++|+....+...+..+++...+.++.++.||++|.+++++++++    ++
T Consensus       240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g~  319 (496)
T 3mje_A          240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDAP  319 (496)
T ss_dssp             SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTSC
T ss_pred             CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            8999999999999999999999999 788888865444333333333333357899999999999999999875    57


Q ss_pred             CcEEEEccccc-CcCC----CCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChH
Q 022471          146 FDAVMHFAAVA-YVGE----STLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (296)
Q Consensus       146 ~D~vi~~Ag~~-~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (296)
                      +|+||||||+. ....    ..+.....+++|+.++.++.+++.+...++||++||.+.+.           .......|
T Consensus       320 ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~-----------g~~g~~~Y  388 (496)
T 3mje_A          320 LTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVW-----------GSGGQPGY  388 (496)
T ss_dssp             EEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHT-----------TCTTCHHH
T ss_pred             CeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcC-----------CCCCcHHH
Confidence            99999999986 3332    33344567889999999999999988889999999977652           23346789


Q ss_pred             HHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCC
Q 022471          221 GKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       221 ~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                      +++|.+.+.+++.++. .|+++++|.||.+.+++.
T Consensus       389 aAaKa~ldala~~~~~-~Gi~v~sV~pG~w~~~gm  422 (496)
T 3mje_A          389 AAANAYLDALAEHRRS-LGLTASSVAWGTWGEVGM  422 (496)
T ss_dssp             HHHHHHHHHHHHHHHH-TTCCCEEEEECEESSSCC
T ss_pred             HHHHHHHHHHHHHHHh-cCCeEEEEECCcccCCcc
Confidence            9999999999998765 799999999999987653

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.91  E-value=2.5e-23  Score=177.78  Aligned_cols=154  Identities=21%  Similarity=0.256  Sum_probs=111.2

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      .||+||||||+|+||++++++|+++| ++|++++|+.....+..         ..++.++.+|++|.+++++++  .++|
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~--~~~D   90 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY---------PTNSQIIMGDVLNHAALKQAM--QGQD   90 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC---------CTTEEEEECCTTCHHHHHHHH--TTCS
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc---------cCCcEEEEecCCCHHHHHHHh--cCCC
Confidence            35899999999999999999999999 89999998654332111         247889999999999999999  5799


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCC--CCCCCCCCCCCChHHHHHH
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKM--PITEETPQAPINPYGKAKK  225 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~--~~~e~~~~~~~~~Y~~sK~  225 (296)
                      +||||||....              ...+++++++|++.+.++||++||..+|+.....  +..+..+..+...|..+| 
T Consensus        91 ~vv~~a~~~~~--------------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  155 (236)
T 3qvo_A           91 IVYANLTGEDL--------------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAA-  155 (236)
T ss_dssp             EEEEECCSTTH--------------HHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGHHHHHHH-
T ss_pred             EEEEcCCCCch--------------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHHHHHHH-
Confidence            99999984211              1346789999999999999999999998754432  222222233344455443 


Q ss_pred             HHHHHHHHhhhcCCCcEEEEecCeeecCCC
Q 022471          226 MAEDIILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       226 ~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                         ..+    ++.|+++++||||.++++..
T Consensus       156 ---~~l----~~~gi~~~~vrPg~i~~~~~  178 (236)
T 3qvo_A          156 ---DAI----EASGLEYTILRPAWLTDEDI  178 (236)
T ss_dssp             ---HHH----HTSCSEEEEEEECEEECCSC
T ss_pred             ---HHH----HHCCCCEEEEeCCcccCCCC
Confidence               333    24899999999999999754

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.90  E-value=2.7e-23  Score=182.10  Aligned_cols=145  Identities=16%  Similarity=0.215  Sum_probs=121.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhC--CCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      |+|+||||||+||++++++|+++  |++|++++|+..+....    ..     .++.++.+|++|.+++.+++  .++|+
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l----~~-----~~~~~~~~D~~d~~~l~~~~--~~~d~   69 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTL----AD-----QGVEVRHGDYNQPESLQKAF--AGVSK   69 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHH----HH-----TTCEEEECCTTCHHHHHHHT--TTCSE
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHH----hh-----cCCeEEEeccCCHHHHHHHH--hcCCE
Confidence            57999999999999999999999  99999999865443211    11     35788999999999999999  57999


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e  228 (296)
                      |||+||...      .  .  ++|+.++.++++++++.+.++||++||.++|.          .    ..+|+.+|.++|
T Consensus        70 vi~~a~~~~------~--~--~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~----------~----~~~y~~~K~~~E  125 (287)
T 2jl1_A           70 LLFISGPHY------D--N--TLLIVQHANVVKAARDAGVKHIAYTGYAFAEE----------S----IIPLAHVHLATE  125 (287)
T ss_dssp             EEECCCCCS------C--H--HHHHHHHHHHHHHHHHTTCSEEEEEEETTGGG----------C----CSTHHHHHHHHH
T ss_pred             EEEcCCCCc------C--c--hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC----------C----CCchHHHHHHHH
Confidence            999998521      1  1  57999999999999999999999999988762          1    137999999999


Q ss_pred             HHHHHhhhcCCCcEEEEecCeeecCC
Q 022471          229 DIILDFSKNSDMAVMILRYFNVIGSD  254 (296)
Q Consensus       229 ~~~~~~~~~~gi~~~~lrpg~v~Gp~  254 (296)
                      .+++.    .|++++++||+.++|+.
T Consensus       126 ~~~~~----~~~~~~ilrp~~~~~~~  147 (287)
T 2jl1_A          126 YAIRT----TNIPYTFLRNALYTDFF  147 (287)
T ss_dssp             HHHHH----TTCCEEEEEECCBHHHH
T ss_pred             HHHHH----cCCCeEEEECCEecccc
Confidence            99865    79999999999998865

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.90  E-value=8.6e-23  Score=180.21  Aligned_cols=158  Identities=16%  Similarity=0.181  Sum_probs=124.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+|||||||||||++|+++|+++||+|+++.|++...               .+   ..|    +...+.+  .++|+||
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~---------------~~---~~~----~~~~~~l--~~~d~vi   56 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG---------------RI---TWD----ELAASGL--PSCDAAV   56 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT---------------EE---EHH----HHHHHCC--CSCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC---------------ee---ecc----hhhHhhc--cCCCEEE
Confidence            6799999999999999999999999999999864321               11   122    1122333  5799999


Q ss_pred             EcccccCcC----CCCcChHHHHHHHHHHHHHHHHHHHHcCCC--EEEEEcccccccCCCCCCCCCCCCCCCCChHHHHH
Q 022471          151 HFAAVAYVG----ESTLDPLKYYHNITSNTLVVLESMARHGVD--TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAK  224 (296)
Q Consensus       151 ~~Ag~~~~~----~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~--riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK  224 (296)
                      |+||.....    .+.......++.|+.+|.++++++.+.+.+  ++|++||.++||.....+.+|+.+..+...|+.+|
T Consensus        57 hla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~  136 (298)
T 4b4o_A           57 NLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLV  136 (298)
T ss_dssp             ECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHH
T ss_pred             EeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHH
Confidence            999854322    123334567889999999999999887654  58899999999998888999999999999999988


Q ss_pred             HHHHHHHHHhhhcCCCcEEEEecCeeecCC
Q 022471          225 KMAEDIILDFSKNSDMAVMILRYFNVIGSD  254 (296)
Q Consensus       225 ~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|...  ...+.+++++++||+.||||+
T Consensus       137 ~~~e~~~--~~~~~~~~~~~~r~~~v~g~~  164 (298)
T 4b4o_A          137 TKWEAAA--RLPGDSTRQVVVRSGVVLGRG  164 (298)
T ss_dssp             HHHHHHH--CCSSSSSEEEEEEECEEECTT
T ss_pred             HHHHHHH--HhhccCCceeeeeeeeEEcCC
Confidence            8887643  334589999999999999997

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.90  E-value=2.2e-23  Score=195.94  Aligned_cols=174  Identities=18%  Similarity=0.171  Sum_probs=136.2

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCe-EEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (296)
                      .++++|||||+||||++++++|+++|++ |++++|+........+..+++...+.++.++.+|++|.+++++++++    
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~  304 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD  304 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence            4489999999999999999999999995 89999876433323333232322346789999999999999998865    


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCCh
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~  219 (296)
                      +++|+||||||+.....    ..+.....++.|+.|+.++.+++.+.+.++||++||.+.+.           .......
T Consensus       305 g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~-----------g~~g~~~  373 (486)
T 2fr1_A          305 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAF-----------GAPGLGG  373 (486)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHT-----------CCTTCTT
T ss_pred             CCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcC-----------CCCCCHH
Confidence            46899999999865432    33445567789999999999999888889999999976542           1234678


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCC
Q 022471          220 YGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSD  254 (296)
Q Consensus       220 Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~  254 (296)
                      |+.+|.+.+.+++.++. .|+++++|+||.+++++
T Consensus       374 Yaaaka~l~~la~~~~~-~gi~v~~i~pG~~~~~g  407 (486)
T 2fr1_A          374 YAPGNAYLDGLAQQRRS-DGLPATAVAWGTWAGSG  407 (486)
T ss_dssp             THHHHHHHHHHHHHHHH-TTCCCEEEEECCBC---
T ss_pred             HHHHHHHHHHHHHHHHh-cCCeEEEEECCeeCCCc
Confidence            99999999999988765 69999999999998874

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.90  E-value=5.4e-23  Score=194.19  Aligned_cols=172  Identities=18%  Similarity=0.164  Sum_probs=136.6

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      .+++||||||+||||++++++|+++|+ +|++++|+........+..+++...+.++.++.||++|.++++++++++++|
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld  337 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPN  337 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCc
Confidence            348999999999999999999999999 5888998754333333333333333567999999999999999999777899


Q ss_pred             EEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHH
Q 022471          148 AVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGK  222 (296)
Q Consensus       148 ~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~-~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~  222 (296)
                      +||||||+.....    ..+.....++.|+.++.++.+++.+. +.++||++||.+.+.           ...+...|+.
T Consensus       338 ~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~-----------g~~g~~~Yaa  406 (511)
T 2z5l_A          338 AVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTW-----------GNAGQGAYAA  406 (511)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTT-----------CCTTBHHHHH
T ss_pred             EEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcC-----------CCCCCHHHHH
Confidence            9999999865443    23344557889999999999988766 678999999976531           1234678999


Q ss_pred             HHHHHHHHHHHhhhcCCCcEEEEecCeeec
Q 022471          223 AKKMAEDIILDFSKNSDMAVMILRYFNVIG  252 (296)
Q Consensus       223 sK~~~e~~~~~~~~~~gi~~~~lrpg~v~G  252 (296)
                      +|.+.+.+++.+.. .|+++++|+||.+.+
T Consensus       407 aKa~ld~la~~~~~-~gi~v~sv~pG~~~~  435 (511)
T 2z5l_A          407 ANAALDALAERRRA-AGLPATSVAWGLWGG  435 (511)
T ss_dssp             HHHHHHHHHHHHHT-TTCCCEEEEECCBCS
T ss_pred             HHHHHHHHHHHHHH-cCCcEEEEECCcccC
Confidence            99999999998754 799999999999843

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.90  E-value=7e-23  Score=180.80  Aligned_cols=154  Identities=18%  Similarity=0.141  Sum_probs=124.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      |+|+||||||+||++++++|+++| ++|++++|++.+..  .+.+..     .+++++.+|++|.+++.+++  .++|+|
T Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~--~~~l~~-----~~~~~~~~D~~d~~~l~~~~--~~~d~v   76 (299)
T 2wm3_A            6 KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKA--AKELRL-----QGAEVVQGDQDDQVIMELAL--NGAYAT   76 (299)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHH--HHHHHH-----TTCEEEECCTTCHHHHHHHH--TTCSEE
T ss_pred             CEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHH--HHHHHH-----CCCEEEEecCCCHHHHHHHH--hcCCEE
Confidence            789999999999999999999999 99999998754421  111211     35788999999999999999  579999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~  229 (296)
                      ||||+.....        ..+.|+.++.++++++++.++++||++||..+|+....         .+..+|+.+|.++|.
T Consensus        77 i~~a~~~~~~--------~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~---------~~~~~y~~sK~~~e~  139 (299)
T 2wm3_A           77 FIVTNYWESC--------SQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAG---------RLAAAHFDGKGEVEE  139 (299)
T ss_dssp             EECCCHHHHT--------CHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTT---------SCCCHHHHHHHHHHH
T ss_pred             EEeCCCCccc--------cchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCC---------cccCchhhHHHHHHH
Confidence            9999853210        24567889999999999999999999888777753211         135789999999999


Q ss_pred             HHHHhhhcCCCcEEEEecCeeecCC
Q 022471          230 IILDFSKNSDMAVMILRYFNVIGSD  254 (296)
Q Consensus       230 ~~~~~~~~~gi~~~~lrpg~v~Gp~  254 (296)
                      +++.    .|++++++||+++||+.
T Consensus       140 ~~~~----~gi~~~ilrp~~~~~~~  160 (299)
T 2wm3_A          140 YFRD----IGVPMTSVRLPCYFENL  160 (299)
T ss_dssp             HHHH----HTCCEEEEECCEEGGGG
T ss_pred             HHHH----CCCCEEEEeecHHhhhc
Confidence            9876    58999999999999975

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.89  E-value=2.3e-23  Score=201.14  Aligned_cols=165  Identities=15%  Similarity=0.075  Sum_probs=119.5

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEec---------CCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHH
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN---------LSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNK  139 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~  139 (296)
                      .+|++|||||+||||+++|++|+++|++|++++|         +....+...+.++..   +..   ..+|++|.+++++
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~---~~~---~~~D~~d~~~~~~   91 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA---GGE---AVADYNSVIDGAK   91 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHT---TCC---EEECCCCGGGHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHh---CCe---EEEEeCCHHHHHH
Confidence            3499999999999999999999999999999987         333333333333332   222   2479999988888


Q ss_pred             Hhhc-----CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHH----HHHHHHcCCCEEEEEcccccccCCCCC
Q 022471          140 FFSE-----NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKM  206 (296)
Q Consensus       140 ~~~~-----~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~l----l~~~~~~~~~riV~~SS~~~~g~~~~~  206 (296)
                      ++++     +++|+||||||+.....    ..++.+..+++|+.++..+    ++.|++++.++||++||.+.+.     
T Consensus        92 ~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~-----  166 (613)
T 3oml_A           92 VIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIY-----  166 (613)
T ss_dssp             HHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHH-----
T ss_pred             HHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC-----
Confidence            7765     58999999999865433    3445566788999996654    4555777778999999977652     


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCee
Q 022471          207 PITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNV  250 (296)
Q Consensus       207 ~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v  250 (296)
                            +..+...|++||++.+.+++.++.|   +||++++|.||.+
T Consensus       167 ------~~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~  207 (613)
T 3oml_A          167 ------GNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA  207 (613)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--
T ss_pred             ------CCCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC
Confidence                  2334678999999999999999988   6899999999975

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.89  E-value=1.2e-22  Score=183.62  Aligned_cols=173  Identities=13%  Similarity=0.013  Sum_probs=127.5

Q ss_pred             CCccEEEEEcCCChhhHHHHHHHHh-CCCeEEEEecCCCCcch------------hhhhhhhhCCCCCceEEEEccCCCH
Q 022471           68 EGVTHVLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIG------------AVKVLQELFPEPGRLQFIYADLGDA  134 (296)
Q Consensus        68 ~~~k~vlVTGasG~IG~~la~~L~~-~G~~V~~~~r~~~~~~~------------~~~~~~~~~~~~~~~~~~~~Dl~d~  134 (296)
                      .++|++|||||++|||+++++.|++ +|++|++++|+.....+            ..+.+++   .+..+..+.+|++|.
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~---~G~~a~~i~~Dvtd~  121 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQ---KGLYAKSINGDAFSD  121 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHH---TTCCEEEEESCTTSH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHh---cCCceEEEECCCCCH
Confidence            3459999999999999999999999 99999999986544321            1222222   245788899999999


Q ss_pred             HHHHHHhhc-----CCCcEEEEcccccC-------------cCC-------------------------CCcChHHHHHH
Q 022471          135 KAVNKFFSE-----NAFDAVMHFAAVAY-------------VGE-------------------------STLDPLKYYHN  171 (296)
Q Consensus       135 ~~v~~~~~~-----~~~D~vi~~Ag~~~-------------~~~-------------------------~~~~~~~~~~~  171 (296)
                      +++++++++     +++|+||||||...             ..+                         ++++....+++
T Consensus       122 ~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~V  201 (405)
T 3zu3_A          122 EIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAV  201 (405)
T ss_dssp             HHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHh
Confidence            999888765     78999999999741             111                         22233445566


Q ss_pred             HHHHHH-HHHHHHHHc----CCCEEEEEcccccccCCCCCCCCCCCCCCCC--ChHHHHHHHHHHHHHHhhhc---C-CC
Q 022471          172 ITSNTL-VVLESMARH----GVDTLIYSSTCATYGEPEKMPITEETPQAPI--NPYGKAKKMAEDIILDFSKN---S-DM  240 (296)
Q Consensus       172 n~~~t~-~ll~~~~~~----~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~--~~Y~~sK~~~e~~~~~~~~~---~-gi  240 (296)
                      |..+.. .+++++...    +.++||++||.+..           .+.+..  ..|++||.+.+.+++.++.|   + ||
T Consensus       202 n~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~-----------~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GI  270 (405)
T 3zu3_A          202 MGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEK-----------ITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGG  270 (405)
T ss_dssp             HSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCG-----------GGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred             hchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhh-----------CcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCe
Confidence            665554 444444322    23689999997654           122223  89999999999999999988   6 99


Q ss_pred             cEEEEecCeeecCC
Q 022471          241 AVMILRYFNVIGSD  254 (296)
Q Consensus       241 ~~~~lrpg~v~Gp~  254 (296)
                      +++++.||.|-.+.
T Consensus       271 RVNaVaPG~i~T~~  284 (405)
T 3zu3_A          271 DARVSVLKAVVSQA  284 (405)
T ss_dssp             EEEEEECCCCCCHH
T ss_pred             EEEEEEeCCCcCch
Confidence            99999999998874

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.89  E-value=1.5e-22  Score=194.79  Aligned_cols=165  Identities=13%  Similarity=0.088  Sum_probs=125.6

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccC-CCHHHH-HHHhhc-CC
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL-GDAKAV-NKFFSE-NA  145 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~d~~~v-~~~~~~-~~  145 (296)
                      .+|+++||||++|||++++++|+++|++|++.++.  ..++..+++++.   +.++..+.+|+ ++.+.+ +++.++ ++
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~--~~~~~~~~i~~~---g~~~~~~~~Dv~~~~~~~~~~~~~~~G~  395 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK--DATKTVDEIKAA---GGEAWPDQHDVAKDSEAIIKNVIDKYGT  395 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS--CCHHHHHHHHHT---TCEEEEECCCHHHHHHHHHHHHHHHHSC
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCc--cHHHHHHHHHhc---CCeEEEEEcChHHHHHHHHHHHHHhcCC
Confidence            34999999999999999999999999999998862  334444444432   35677788999 554433 233322 78


Q ss_pred             CcEEEEcccccCcCC----CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGE----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +|+||||||+.....    ..++++..+++|+.|    ++.+++.|++++.++||++||.+.+           .+.+..
T Consensus       396 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~-----------~~~~~~  464 (604)
T 2et6_A          396 IDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGI-----------YGNFGQ  464 (604)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHH-----------SCCTTB
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhc-----------cCCCCC
Confidence            999999999865433    334455678899998    4557777777777899999997765           223346


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCe
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFN  249 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~  249 (296)
                      ..|++||++...+++.++.|   +||++++|.||.
T Consensus       465 ~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~  499 (604)
T 2et6_A          465 ANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA  499 (604)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC
T ss_pred             hhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC
Confidence            78999999999999999988   799999999994

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.89  E-value=1.2e-22  Score=183.14  Aligned_cols=155  Identities=16%  Similarity=0.285  Sum_probs=126.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+|+||||||+||++++++|+++|++|++++|+........+.++.+.  ..++.++.+|++|.+++.+++++.++|+||
T Consensus        11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi   88 (346)
T 3i6i_A           11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALE--DKGAIIVYGLINEQEAMEKILKEHEIDIVV   88 (346)
T ss_dssp             CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHH--hCCcEEEEeecCCHHHHHHHHhhCCCCEEE
Confidence            789999999999999999999999999999997643332223222222  257899999999999999999655899999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~  229 (296)
                      |+||..               |+.++.++++++++.+ +++||+ |+   ||.    +.+|..+..|...|+.+|.++|.
T Consensus        89 ~~a~~~---------------n~~~~~~l~~aa~~~g~v~~~v~-S~---~g~----~~~e~~~~~p~~~y~~sK~~~e~  145 (346)
T 3i6i_A           89 STVGGE---------------SILDQIALVKAMKAVGTIKRFLP-SE---FGH----DVNRADPVEPGLNMYREKRRVRQ  145 (346)
T ss_dssp             ECCCGG---------------GGGGHHHHHHHHHHHCCCSEEEC-SC---CSS----CTTTCCCCTTHHHHHHHHHHHHH
T ss_pred             ECCchh---------------hHHHHHHHHHHHHHcCCceEEee-cc---cCC----CCCccCcCCCcchHHHHHHHHHH
Confidence            999852               7888999999999999 999986 43   432    24555666778899999999999


Q ss_pred             HHHHhhhcCCCcEEEEecCeeecCC
Q 022471          230 IILDFSKNSDMAVMILRYFNVIGSD  254 (296)
Q Consensus       230 ~~~~~~~~~gi~~~~lrpg~v~Gp~  254 (296)
                      +++.    .|++++++|||++||..
T Consensus       146 ~l~~----~g~~~tivrpg~~~g~~  166 (346)
T 3i6i_A          146 LVEE----SGIPFTYICCNSIASWP  166 (346)
T ss_dssp             HHHH----TTCCBEEEECCEESSCC
T ss_pred             HHHH----cCCCEEEEEeccccccc
Confidence            8876    78999999999999975

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.89  E-value=1.4e-22  Score=191.98  Aligned_cols=171  Identities=16%  Similarity=0.159  Sum_probs=132.2

Q ss_pred             CCccEEEEEcCCChhhHHHHHHHHhCCCe-EEEE-ecCCCC----------cchhhhhhhhhCCCCCceEEEEccCCCHH
Q 022471           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYR-VTIV-DNLSRG----------NIGAVKVLQELFPEPGRLQFIYADLGDAK  135 (296)
Q Consensus        68 ~~~k~vlVTGasG~IG~~la~~L~~~G~~-V~~~-~r~~~~----------~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~  135 (296)
                      ..++++|||||+||||.+++++|+++|++ |+++ +|+...          .+...+.++++...+.++.++.||++|.+
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~  328 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAE  328 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence            34489999999999999999999999997 5666 776422          22222222222222568999999999999


Q ss_pred             HHHHHhhc----CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHHcC-----CCEEEEEcccccccC
Q 022471          136 AVNKFFSE----NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARHG-----VDTLIYSSTCATYGE  202 (296)
Q Consensus       136 ~v~~~~~~----~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~~-----~~riV~~SS~~~~g~  202 (296)
                      ++++++++    +++|+||||||+.....    ..+.....+++|+.|+.++.+++....     .++||++||.+.+. 
T Consensus       329 ~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~-  407 (525)
T 3qp9_A          329 AAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIW-  407 (525)
T ss_dssp             HHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTT-
T ss_pred             HHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcC-
Confidence            99999876    57999999999865443    333455678899999999999887765     78999999987652 


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCee
Q 022471          203 PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNV  250 (296)
Q Consensus       203 ~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v  250 (296)
                                +......|+++|.+.+.+++.++. .|+++++|.||.+
T Consensus       408 ----------g~~g~~~YaaaKa~l~~lA~~~~~-~gi~v~sI~pG~~  444 (525)
T 3qp9_A          408 ----------GGAGQGAYAAGTAFLDALAGQHRA-DGPTVTSVAWSPW  444 (525)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHTSCCS-SCCEEEEEEECCB
T ss_pred             ----------CCCCCHHHHHHHHHHHHHHHHHHh-CCCCEEEEECCcc
Confidence                      234478899999999999877654 6999999999999

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.89  E-value=1e-22  Score=179.87  Aligned_cols=174  Identities=11%  Similarity=-0.057  Sum_probs=121.2

Q ss_pred             ccEEEEEcCC--ChhhHHHHHHHHhCCCeEEEEecCCC--------CcchhhhhhhhhCCCC--CceEEEEcc-------
Q 022471           70 VTHVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSR--------GNIGAVKVLQELFPEP--GRLQFIYAD-------  130 (296)
Q Consensus        70 ~k~vlVTGas--G~IG~~la~~L~~~G~~V~~~~r~~~--------~~~~~~~~~~~~~~~~--~~~~~~~~D-------  130 (296)
                      +|++|||||+  ||||++++++|+++|++|++++|++.        +.... +.++++....  .....+.+|       
T Consensus         8 ~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (297)
T 1d7o_A            8 GKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKF-DQSRVLPDGSLMEIKKVYPLDAVFDNPE   86 (297)
T ss_dssp             TCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTT-TGGGBCTTSSBCCEEEEEEECTTCCSGG
T ss_pred             CCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHh-hhhhhhccccccccccccccceeccchh
Confidence            3899999999  99999999999999999999986420        00011 1111111000  012333333       


Q ss_pred             -CC----C--------HHHHHHHhhc-----CCCcEEEEcccccC--cC----CCCcChHHHHHHHHHHHHHHHHHHHHc
Q 022471          131 -LG----D--------AKAVNKFFSE-----NAFDAVMHFAAVAY--VG----ESTLDPLKYYHNITSNTLVVLESMARH  186 (296)
Q Consensus       131 -l~----d--------~~~v~~~~~~-----~~~D~vi~~Ag~~~--~~----~~~~~~~~~~~~n~~~t~~ll~~~~~~  186 (296)
                       ++    |        .+++++++++     +++|+||||||+..  ..    ...++++..+++|+.++..+++++.+.
T Consensus        87 dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  166 (297)
T 1d7o_A           87 DVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPI  166 (297)
T ss_dssp             GSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence             32    2        3455555543     68999999999643  11    233445668899999999988888754


Q ss_pred             --CCCEEEEEcccccccCCCCCCCCCCCCCCCC-ChHHHHHHHHHHHHHHhhhc----CCCcEEEEecCeeecCCC
Q 022471          187 --GVDTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSKN----SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       187 --~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~-~~Y~~sK~~~e~~~~~~~~~----~gi~~~~lrpg~v~Gp~~  255 (296)
                        ..++||++||.+.+.           +.+.. ..|+.||++.+.+++.++.|    +||++++|+||+|.+|..
T Consensus       167 m~~~g~iv~isS~~~~~-----------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~  231 (297)
T 1d7o_A          167 MNPGGASISLTYIASER-----------IIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAA  231 (297)
T ss_dssp             EEEEEEEEEEECGGGTS-----------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCS
T ss_pred             hccCceEEEEecccccc-----------CCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchh
Confidence              126999999987652           22234 58999999999999999877    589999999999999863

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.88  E-value=4.3e-23  Score=185.06  Aligned_cols=174  Identities=10%  Similarity=-0.015  Sum_probs=126.9

Q ss_pred             ccEEEEEcCCC--hhhHHHHHHHHhCCCeEEEEecCC---------CCcchhhhhhhhhCCCCCceEEEEccCCCH--H-
Q 022471           70 VTHVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLS---------RGNIGAVKVLQELFPEPGRLQFIYADLGDA--K-  135 (296)
Q Consensus        70 ~k~vlVTGasG--~IG~~la~~L~~~G~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~--~-  135 (296)
                      +|++|||||++  |||+++|++|+++|++|++.++++         .......+...........+.++.+|+++.  + 
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~   81 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence            38999999985  999999999999999999776543         111111111111111123477889999887  6 


Q ss_pred             -----------------HHHHHhhc-----CCCcEEEEcccccC--cCC----CCcChHHHHHHHHHHHHHHHHHHHHcC
Q 022471          136 -----------------AVNKFFSE-----NAFDAVMHFAAVAY--VGE----STLDPLKYYHNITSNTLVVLESMARHG  187 (296)
Q Consensus       136 -----------------~v~~~~~~-----~~~D~vi~~Ag~~~--~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~~  187 (296)
                                       ++++++++     +++|+||||||+..  ...    ..+..+..+++|+.++..+.+++.+.-
T Consensus        82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m  161 (329)
T 3lt0_A           82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence                             77766654     78999999999742  222    334456688999999888777765431


Q ss_pred             --CCEEEEEcccccccCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHhhhc----CCCcEEEEecCeeecCC
Q 022471          188 --VDTLIYSSTCATYGEPEKMPITEETPQAPIN-PYGKAKKMAEDIILDFSKN----SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       188 --~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~-~Y~~sK~~~e~~~~~~~~~----~gi~~~~lrpg~v~Gp~  254 (296)
                        .++||++||.+.+           .+.+... .|+.||++.+.+++.++.|    +||++++|+||.|..+.
T Consensus       162 ~~~g~Iv~isS~~~~-----------~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~  224 (329)
T 3lt0_A          162 KPQSSIISLTYHASQ-----------KVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRA  224 (329)
T ss_dssp             EEEEEEEEEECGGGT-----------SCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHH
T ss_pred             hhCCeEEEEeCcccc-----------CCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechh
Confidence              1699999998765           2333454 8999999999999999887    48999999999998764

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.88  E-value=2.1e-22  Score=183.56  Aligned_cols=175  Identities=14%  Similarity=-0.021  Sum_probs=125.6

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHh-CCCeEEEEecCCCCcchh------------hhhhhhhCCCCCceEEEEccCCCHH
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIGA------------VKVLQELFPEPGRLQFIYADLGDAK  135 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~-~G~~V~~~~r~~~~~~~~------------~~~~~~~~~~~~~~~~~~~Dl~d~~  135 (296)
                      ++|++|||||++|||+++++.|++ +|++|++++|+....++.            .+.+++.   +..+..+.+|++|.+
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~---G~~a~~i~~Dvtd~~  136 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA---GLYSKSINGDAFSDA  136 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT---TCCEEEEESCTTSHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc---CCcEEEEEecCCCHH
Confidence            359999999999999999999999 999999999876544321            1233322   457888999999999


Q ss_pred             HHHHHhhc------CCCcEEEEccccc-------------CcCC-------------------------CCcChHHHHHH
Q 022471          136 AVNKFFSE------NAFDAVMHFAAVA-------------YVGE-------------------------STLDPLKYYHN  171 (296)
Q Consensus       136 ~v~~~~~~------~~~D~vi~~Ag~~-------------~~~~-------------------------~~~~~~~~~~~  171 (296)
                      +++++++.      +++|+||||||..             ...+                         .+++....+++
T Consensus       137 ~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~V  216 (422)
T 3s8m_A          137 ARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITV  216 (422)
T ss_dssp             HHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHh
Confidence            98887754      5799999999872             1111                         11222334444


Q ss_pred             HHHHHH-HHHHHHHHc----CCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEE
Q 022471          172 ITSNTL-VVLESMARH----GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVM  243 (296)
Q Consensus       172 n~~~t~-~ll~~~~~~----~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~  243 (296)
                      |..+.. .+++++...    +.++||++||.+..-..         +......|++||++.+.+++.++.|   +||+++
T Consensus       217 n~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~---------p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVN  287 (422)
T 3s8m_A          217 MGGQDWELWIDALEGAGVLADGARSVAFSYIGTEITW---------PIYWHGALGKAKVDLDRTAQRLNARLAKHGGGAN  287 (422)
T ss_dssp             HSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGH---------HHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred             hchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccC---------CCccchHHHHHHHHHHHHHHHHHHHhCccCEEEE
Confidence            444443 455554432    23689999997653110         1111378999999999999999988   799999


Q ss_pred             EEecCeeecCCC
Q 022471          244 ILRYFNVIGSDP  255 (296)
Q Consensus       244 ~lrpg~v~Gp~~  255 (296)
                      +|.||.|-.+..
T Consensus       288 aVaPG~i~T~~~  299 (422)
T 3s8m_A          288 VAVLKSVVTQAS  299 (422)
T ss_dssp             EEEECCCCCTTG
T ss_pred             EEEcCCCcChhh
Confidence            999999988763

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.88  E-value=3.4e-22  Score=192.38  Aligned_cols=165  Identities=15%  Similarity=0.123  Sum_probs=118.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC------CcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR------GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~  143 (296)
                      +|+++||||++|||++++++|+++|++|++.+|+..      +.+.+.+..+++...+.+..   +|++|.+++++++++
T Consensus         8 gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~---~d~~d~~~~~~~v~~   84 (604)
T 2et6_A            8 DKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAV---ADYNNVLDGDKIVET   84 (604)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEE---EECCCTTCHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEE---EEcCCHHHHHHHHHH
Confidence            389999999999999999999999999999987541      11222222222211123332   466665444444332


Q ss_pred             -----CCCcEEEEcccccCcCC----CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCC
Q 022471          144 -----NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (296)
Q Consensus       144 -----~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e  210 (296)
                           +++|+||||||+.....    ..++++..+++|+.|    ++.+++.|++++.++||++||.+.+-         
T Consensus        85 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~---------  155 (604)
T 2et6_A           85 AVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLY---------  155 (604)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH---------
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC---------
Confidence                 78999999999864433    334456678899999    55577788777778999999976641         


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecC
Q 022471          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYF  248 (296)
Q Consensus       211 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg  248 (296)
                        +.+....|++||++...|++.++.|   +||++++|.|+
T Consensus       156 --~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg  194 (604)
T 2et6_A          156 --GNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL  194 (604)
T ss_dssp             --CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC
Confidence              2234678999999999999999988   79999999997

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.88  E-value=3.4e-22  Score=174.85  Aligned_cols=141  Identities=15%  Similarity=0.183  Sum_probs=113.8

Q ss_pred             EEEEEcCCChhhHHHHHHHHhC--CCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           72 HVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +|+||||||+||++++++|+++  |++|++++|++.+....    ..     .++.++.+|++|.+++.+++  .++|+|
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~----~~-----~~~~~~~~D~~d~~~~~~~~--~~~d~v   69 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQAL----AA-----QGITVRQADYGDEAALTSAL--QGVEKL   69 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHH----HH-----TTCEEEECCTTCHHHHHHHT--TTCSEE
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhh----hc-----CCCeEEEcCCCCHHHHHHHH--hCCCEE
Confidence            4899999999999999999999  99999999876543221    11     35788999999999999999  579999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~  229 (296)
                      ||+||...            +.|+.++.++++++++.+.++||++||.++|.          .    ..+|+.+|.++|.
T Consensus        70 i~~a~~~~------------~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~----------~----~~~y~~sK~~~e~  123 (286)
T 2zcu_A           70 LLISSSEV------------GQRAPQHRNVINAAKAAGVKFIAYTSLLHADT----------S----PLGLADEHIETEK  123 (286)
T ss_dssp             EECC--------------------CHHHHHHHHHHHHTCCEEEEEEETTTTT----------C----CSTTHHHHHHHHH
T ss_pred             EEeCCCCc------------hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC----------C----cchhHHHHHHHHH
Confidence            99998521            14788999999999999999999999988761          1    1479999999999


Q ss_pred             HHHHhhhcCCCcEEEEecCeeecC
Q 022471          230 IILDFSKNSDMAVMILRYFNVIGS  253 (296)
Q Consensus       230 ~~~~~~~~~gi~~~~lrpg~v~Gp  253 (296)
                      +++.    .+++++++||+.++++
T Consensus       124 ~~~~----~~~~~~ilrp~~~~~~  143 (286)
T 2zcu_A          124 MLAD----SGIVYTLLRNGWYSEN  143 (286)
T ss_dssp             HHHH----HCSEEEEEEECCBHHH
T ss_pred             HHHH----cCCCeEEEeChHHhhh
Confidence            9875    6899999999887765

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.87  E-value=2.9e-22  Score=178.58  Aligned_cols=172  Identities=14%  Similarity=0.004  Sum_probs=120.0

Q ss_pred             ccEEEEEcC--CChhhHHHHHHHHhCCCeEEEEecCCC-------CcchhhhhhhhhCCCCC---ceEEEEcc-------
Q 022471           70 VTHVLVTGG--AGYIGSHAALRLLKDSYRVTIVDNLSR-------GNIGAVKVLQELFPEPG---RLQFIYAD-------  130 (296)
Q Consensus        70 ~k~vlVTGa--sG~IG~~la~~L~~~G~~V~~~~r~~~-------~~~~~~~~~~~~~~~~~---~~~~~~~D-------  130 (296)
                      +|++|||||  +||||++++++|+++|++|++++|++.       ......+.++++. .+.   ...++.+|       
T Consensus         9 gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~~~~~   87 (315)
T 2o2s_A            9 GQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLP-DGSLIEFAGVYPLDAAFDKPE   87 (315)
T ss_dssp             TCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCT-TSCBCCCSCEEECCTTCSSTT
T ss_pred             CCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhh-ccccccccccccccccccccc
Confidence            389999999  899999999999999999999986420       0000011112211 111   12344444       


Q ss_pred             -----CCC--------HHHHHHHhhc-----CCCcEEEEcccccC--cCC----CCcChHHHHHHHHHHHHHHHHHHHHc
Q 022471          131 -----LGD--------AKAVNKFFSE-----NAFDAVMHFAAVAY--VGE----STLDPLKYYHNITSNTLVVLESMARH  186 (296)
Q Consensus       131 -----l~d--------~~~v~~~~~~-----~~~D~vi~~Ag~~~--~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~  186 (296)
                           ++|        .+++++++++     +++|+||||||+..  ..+    ..+.+...+++|+.++..+++++.+.
T Consensus        88 ~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  167 (315)
T 2o2s_A           88 DVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPI  167 (315)
T ss_dssp             SSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTT
T ss_pred             hhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence                 332        3455555543     68999999999652  122    33445567899999999988888653


Q ss_pred             --CCCEEEEEcccccccCCCCCCCCCCCCCCCC-ChHHHHHHHHHHHHHHhhhc----CCCcEEEEecCeeecC
Q 022471          187 --GVDTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSKN----SDMAVMILRYFNVIGS  253 (296)
Q Consensus       187 --~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~-~~Y~~sK~~~e~~~~~~~~~----~gi~~~~lrpg~v~Gp  253 (296)
                        ..++||++||.+.+.           +.+.. ..|+.||++.+.+++.++.|    +||++++|+||.|.++
T Consensus       168 m~~~g~Iv~isS~~~~~-----------~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~  230 (315)
T 2o2s_A          168 MNEGGSAVTLSYLAAER-----------VVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSR  230 (315)
T ss_dssp             EEEEEEEEEEEEGGGTS-----------CCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCH
T ss_pred             HhcCCEEEEEecccccc-----------cCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccch
Confidence              126999999987652           22233 48999999999999999876    5899999999999875

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.87  E-value=2.5e-21  Score=169.94  Aligned_cols=146  Identities=13%  Similarity=0.171  Sum_probs=111.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      |+||||||||+||++++++|+++ |++|++++|++.+.....         ..++.++.+|++|.+++.+++  .++|+|
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~---------~~~v~~~~~D~~d~~~l~~~~--~~~d~v   69 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW---------RGKVSVRQLDYFNQESMVEAF--KGMDTV   69 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG---------BTTBEEEECCTTCHHHHHHHT--TTCSEE
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh---------hCCCEEEEcCCCCHHHHHHHH--hCCCEE
Confidence            57999999999999999999998 999999998764433211         257899999999999999999  579999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~  229 (296)
                      |||||....          ...|+.++.++++++++.++++||++||.+..   .      ..+   . .+...+..++.
T Consensus        70 i~~a~~~~~----------~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~---~------~~~---~-~~~~~~~~~e~  126 (289)
T 3e48_A           70 VFIPSIIHP----------SFKRIPEVENLVYAAKQSGVAHIIFIGYYADQ---H------NNP---F-HMSPYFGYASR  126 (289)
T ss_dssp             EECCCCCCS----------HHHHHHHHHHHHHHHHHTTCCEEEEEEESCCS---T------TCC---S-TTHHHHHHHHH
T ss_pred             EEeCCCCcc----------chhhHHHHHHHHHHHHHcCCCEEEEEcccCCC---C------CCC---C-ccchhHHHHHH
Confidence            999986432          13488999999999999999999999994321   1      111   1 12222233333


Q ss_pred             HHHHhhhcCCCcEEEEecCeeecCC
Q 022471          230 IILDFSKNSDMAVMILRYFNVIGSD  254 (296)
Q Consensus       230 ~~~~~~~~~gi~~~~lrpg~v~Gp~  254 (296)
                      .++    +.|++++++||+++||+.
T Consensus       127 ~~~----~~g~~~~ilrp~~~~~~~  147 (289)
T 3e48_A          127 LLS----TSGIDYTYVRMAMYMDPL  147 (289)
T ss_dssp             HHH----HHCCEEEEEEECEESTTH
T ss_pred             HHH----HcCCCEEEEecccccccc
Confidence            333    379999999999999974

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.86  E-value=5.4e-22  Score=177.04  Aligned_cols=174  Identities=13%  Similarity=-0.016  Sum_probs=104.9

Q ss_pred             ccEEEEEcC--CChhhHHHHHHHHhCCCeEEEEecCC--------CCcchhh-----------hhhhhhCCCCC---ceE
Q 022471           70 VTHVLVTGG--AGYIGSHAALRLLKDSYRVTIVDNLS--------RGNIGAV-----------KVLQELFPEPG---RLQ  125 (296)
Q Consensus        70 ~k~vlVTGa--sG~IG~~la~~L~~~G~~V~~~~r~~--------~~~~~~~-----------~~~~~~~~~~~---~~~  125 (296)
                      +|++|||||  ++|||++++++|+++|++|++++|++        +..+...           +..+++...+.   ...
T Consensus         9 ~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (319)
T 2ptg_A            9 GKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFDK   88 (319)
T ss_dssp             TCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCSE
T ss_pred             CCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccccc
Confidence            389999999  89999999999999999999998642        1100000           00111111110   124


Q ss_pred             EEEcc------------CCC--------HHHHHHHhhc-----CCCcEEEEcccccC--cCC----CCcChHHHHHHHHH
Q 022471          126 FIYAD------------LGD--------AKAVNKFFSE-----NAFDAVMHFAAVAY--VGE----STLDPLKYYHNITS  174 (296)
Q Consensus       126 ~~~~D------------l~d--------~~~v~~~~~~-----~~~D~vi~~Ag~~~--~~~----~~~~~~~~~~~n~~  174 (296)
                      ++.+|            ++|        .+++++++++     +++|+||||||+..  ..+    ..+.++..+++|+.
T Consensus        89 ~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~  168 (319)
T 2ptg_A           89 IYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSY  168 (319)
T ss_dssp             EEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTH
T ss_pred             cccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhH
Confidence            44444            332        2345555543     68999999999652  222    33445567889999


Q ss_pred             HHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCCCCCCC-ChHHHHHHHHHHHHHHhhhc----CCCcEEEEec
Q 022471          175 NTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSKN----SDMAVMILRY  247 (296)
Q Consensus       175 ~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~-~~Y~~sK~~~e~~~~~~~~~----~gi~~~~lrp  247 (296)
                      ++..+++++.+.  ..++||++||.+.+.           +.+.. ..|+.||++.+.+++.++.|    +||++++|+|
T Consensus       169 g~~~l~~~~~~~m~~~g~Iv~isS~~~~~-----------~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~P  237 (319)
T 2ptg_A          169 SFVSLLQHFLPLMKEGGSALALSYIASEK-----------VIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISA  237 (319)
T ss_dssp             HHHHHHHHHGGGEEEEEEEEEEEECC-----------------------------THHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             HHHHHHHHHHHHHhcCceEEEEecccccc-----------ccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEee
Confidence            999888887654  126999999977652           22234 58999999999999999877    4899999999


Q ss_pred             CeeecCC
Q 022471          248 FNVIGSD  254 (296)
Q Consensus       248 g~v~Gp~  254 (296)
                      |.|.++.
T Consensus       238 G~v~T~~  244 (319)
T 2ptg_A          238 GPLKSRA  244 (319)
T ss_dssp             CCCC---
T ss_pred             CCccChh
Confidence            9998874

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.86  E-value=4.6e-21  Score=173.38  Aligned_cols=149  Identities=16%  Similarity=0.169  Sum_probs=118.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEcc-CCCHHHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD-LGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D-l~d~~~v~~~~~~~~~D~v  149 (296)
                      |+|+||||||+||++++++|+++|++|++++|+.....  .+.+..    ..++.++.+| ++|.+++.+++  .++|+|
T Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~----~~~v~~v~~D~l~d~~~l~~~~--~~~d~V   77 (352)
T 1xgk_A            6 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA----IPNVTLFQGPLLNNVPLMDTLF--EGAHLA   77 (352)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT----STTEEEEESCCTTCHHHHHHHH--TTCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh----cCCcEEEECCccCCHHHHHHHH--hcCCEE
Confidence            78999999999999999999999999999998654421  112221    1368889999 99999999999  579999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcccc--cccCCCCCCCCCCCCCCCCChHHHHHHH
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCA--TYGEPEKMPITEETPQAPINPYGKAKKM  226 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~~riV~~SS~~--~~g~~~~~~~~e~~~~~~~~~Y~~sK~~  226 (296)
                      |||++...           .+.|..+ +++++++++.+ +++||++||..  .|+            ..+..+|+.||.+
T Consensus        78 i~~a~~~~-----------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~------------~~~~~~y~~sK~~  133 (352)
T 1xgk_A           78 FINTTSQA-----------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYG------------PWPAVPMWAPKFT  133 (352)
T ss_dssp             EECCCSTT-----------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTS------------SCCCCTTTHHHHH
T ss_pred             EEcCCCCC-----------cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccC------------CCCCccHHHHHHH
Confidence            99997431           0236666 99999999998 89999999975  332            1234679999999


Q ss_pred             HHHHHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          227 AEDIILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       227 ~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                      +|.+++.    .+++++++||+ +||++..
T Consensus       134 ~E~~~~~----~gi~~~ivrpg-~~g~~~~  158 (352)
T 1xgk_A          134 VENYVRQ----LGLPSTFVYAG-IYNNNFT  158 (352)
T ss_dssp             HHHHHHT----SSSCEEEEEEC-EEGGGCB
T ss_pred             HHHHHHH----cCCCEEEEecc-eecCCch
Confidence            9999976    58999999987 6888653

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.86  E-value=7.2e-21  Score=174.55  Aligned_cols=172  Identities=12%  Similarity=-0.012  Sum_probs=124.1

Q ss_pred             CccEEEEEcCCChhhHH--HHHHHHhCCCeEEEEecCCCCcc------------hhhhhhhhhCCCCCceEEEEccCCCH
Q 022471           69 GVTHVLVTGGAGYIGSH--AALRLLKDSYRVTIVDNLSRGNI------------GAVKVLQELFPEPGRLQFIYADLGDA  134 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~--la~~L~~~G~~V~~~~r~~~~~~------------~~~~~~~~~~~~~~~~~~~~~Dl~d~  134 (296)
                      ++|++|||||++|||++  ++++|+++|++|++++|+.....            ...+.+++   .+.++.++.+|++|.
T Consensus        59 ~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~Dvtd~  135 (418)
T 4eue_A           59 GPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKK---KGLVAKNFIEDAFSN  135 (418)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHH---TTCCEEEEESCTTCH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHH---cCCcEEEEEeeCCCH
Confidence            44999999999999999  99999999999999998654432            11222222   245788999999999


Q ss_pred             HHHHHHhhc-----CCCcEEEEccccc-------------CcCC-------------------------CCcChHHHHHH
Q 022471          135 KAVNKFFSE-----NAFDAVMHFAAVA-------------YVGE-------------------------STLDPLKYYHN  171 (296)
Q Consensus       135 ~~v~~~~~~-----~~~D~vi~~Ag~~-------------~~~~-------------------------~~~~~~~~~~~  171 (296)
                      +++++++++     +++|+||||||..             ...+                         ..+.....+++
T Consensus       136 ~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~v  215 (418)
T 4eue_A          136 ETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKV  215 (418)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHH
Confidence            999888765     7899999999974             1111                         11222334444


Q ss_pred             HHHHHH-HHHHHHHHc----CCCEEEEEcccccccCCCCCCCCCCCCCCCC--ChHHHHHHHHHHHHHHhhhc----CCC
Q 022471          172 ITSNTL-VVLESMARH----GVDTLIYSSTCATYGEPEKMPITEETPQAPI--NPYGKAKKMAEDIILDFSKN----SDM  240 (296)
Q Consensus       172 n~~~t~-~ll~~~~~~----~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~--~~Y~~sK~~~e~~~~~~~~~----~gi  240 (296)
                      |..+.. .++.++...    +.++||++||.+..           .+.+..  ..|++||++.+.+++.++.|    +||
T Consensus       216 n~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~-----------~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GI  284 (418)
T 4eue_A          216 MGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSP-----------RTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGG  284 (418)
T ss_dssp             HSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCG-----------GGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             hhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhc-----------CCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCe
Confidence            444333 444554432    23689999997643           122334  89999999999999999987    489


Q ss_pred             cEEEEecCeeecCC
Q 022471          241 AVMILRYFNVIGSD  254 (296)
Q Consensus       241 ~~~~lrpg~v~Gp~  254 (296)
                      +++++.||.|-.+.
T Consensus       285 rVN~V~PG~v~T~~  298 (418)
T 4eue_A          285 RAFVSVNKALVTKA  298 (418)
T ss_dssp             EEEEEECCCCCCHH
T ss_pred             EEEEEECCcCcChh
Confidence            99999999998864

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.85  E-value=1.5e-20  Score=166.55  Aligned_cols=157  Identities=18%  Similarity=0.223  Sum_probs=118.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc-chhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN-IGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +|+|+||||||+||++++++|+++|++|++++|+.... .+..+.++.+.  ..+++++.+|++|.+++.+++  .++|+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~--~~~d~   79 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDAL--KQVDV   79 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHHH--TTCSE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHH--hCCeEEEeCCCCCHHHHHHHH--hCCCE
Confidence            47899999999999999999999999999999875432 11122222221  246889999999999999999  57999


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcccccccCCCCCCCCCCCCCCC-CChHHHHHHH
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP-INPYGKAKKM  226 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~~~-~~~Y~~sK~~  226 (296)
                      |||+|+.....           .|+.++.++++++++.+ +++||+ |   +||......   +.+..| ...| .+|.+
T Consensus        80 vi~~a~~~~~~-----------~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~---~~~~~p~~~~y-~sK~~  140 (313)
T 1qyd_A           80 VISALAGGVLS-----------HHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPDIM---EHALQPGSITF-IDKRK  140 (313)
T ss_dssp             EEECCCCSSSS-----------TTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTTSC---CCCCSSTTHHH-HHHHH
T ss_pred             EEECCccccch-----------hhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCcccc---ccCCCCCcchH-HHHHH
Confidence            99999965321           26777899999999998 899985 3   344221111   122233 4578 99999


Q ss_pred             HHHHHHHhhhcCCCcEEEEecCeeecC
Q 022471          227 AEDIILDFSKNSDMAVMILRYFNVIGS  253 (296)
Q Consensus       227 ~e~~~~~~~~~~gi~~~~lrpg~v~Gp  253 (296)
                      +|.+++.    .|++++++||+.++|+
T Consensus       141 ~e~~~~~----~g~~~~ilrp~~~~~~  163 (313)
T 1qyd_A          141 VRRAIEA----ASIPYTYVSSNMFAGY  163 (313)
T ss_dssp             HHHHHHH----TTCCBCEEECCEEHHH
T ss_pred             HHHHHHh----cCCCeEEEEeceeccc
Confidence            9998865    7899999999999884

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.84  E-value=1.7e-20  Score=165.82  Aligned_cols=153  Identities=14%  Similarity=0.206  Sum_probs=114.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC-CCcc--hhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS-RGNI--GAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~-~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (296)
                      ||+|+||||||+||++++++|+++|++|++++|+. ....  +..+.++.+.  ..++.++.+|++|.+++.+++  .++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~--~~~   77 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQ--SLGVILLEGDINDHETLVKAI--KQV   77 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHH--TTC
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHH--hCCCEEEEeCCCCHHHHHHHH--hCC
Confidence            47899999999999999999999999999999875 1111  1111122211  145889999999999999999  579


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcccccccCCCCCCCCCCCCCCC-CChHHHHH
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP-INPYGKAK  224 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~~~-~~~Y~~sK  224 (296)
                      |+||||||...               +.++.++++++++.+ +++||+ |+   ||...    ++..+..| .+.| .+|
T Consensus        78 d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~----~~~~~~~p~~~~y-~sK  133 (307)
T 2gas_A           78 DIVICAAGRLL---------------IEDQVKIIKAIKEAGNVKKFFP-SE---FGLDV----DRHDAVEPVRQVF-EEK  133 (307)
T ss_dssp             SEEEECSSSSC---------------GGGHHHHHHHHHHHCCCSEEEC-SC---CSSCT----TSCCCCTTHHHHH-HHH
T ss_pred             CEEEECCcccc---------------cccHHHHHHHHHhcCCceEEee-cc---cccCc----ccccCCCcchhHH-HHH
Confidence            99999998542               345788999999998 899983 32   43211    12223333 4579 999


Q ss_pred             HHHHHHHHHhhhcCCCcEEEEecCeeecCC
Q 022471          225 KMAEDIILDFSKNSDMAVMILRYFNVIGSD  254 (296)
Q Consensus       225 ~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~  254 (296)
                      .++|.+++.    .+++++++||+.++++.
T Consensus       134 ~~~e~~~~~----~~i~~~~lrp~~~~~~~  159 (307)
T 2gas_A          134 ASIRRVIEA----EGVPYTYLCCHAFTGYF  159 (307)
T ss_dssp             HHHHHHHHH----HTCCBEEEECCEETTTT
T ss_pred             HHHHHHHHH----cCCCeEEEEcceeeccc
Confidence            999998875    58999999999998864

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.83  E-value=2.2e-20  Score=165.13  Aligned_cols=153  Identities=14%  Similarity=0.224  Sum_probs=115.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc--chhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN--IGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      ||+|+||||||+||++++++|+++|++|++++|+....  .+..+.++.+.  ..+++++.+|++|.+++.++++  ++|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~--~~d   79 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVK--NVD   79 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHH--TCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH--hCCCEEEEeccCCHHHHHHHHc--CCC
Confidence            47899999999999999999999999999999875432  22222222221  2468899999999999999994  699


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcccccccCCCCCCCCCCCCCCC-CChHHHHHH
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP-INPYGKAKK  225 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~~~-~~~Y~~sK~  225 (296)
                      +|||+|+...               +.++.++++++++.+ +++||+ |+   ||..    .++..+..| ...| .+|.
T Consensus        80 ~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~----~~~~~~~~p~~~~y-~sK~  135 (308)
T 1qyc_A           80 VVISTVGSLQ---------------IESQVNIIKAIKEVGTVKRFFP-SE---FGND----VDNVHAVEPAKSVF-EVKA  135 (308)
T ss_dssp             EEEECCCGGG---------------SGGGHHHHHHHHHHCCCSEEEC-SC---CSSC----TTSCCCCTTHHHHH-HHHH
T ss_pred             EEEECCcchh---------------hhhHHHHHHHHHhcCCCceEee-cc---cccC----ccccccCCcchhHH-HHHH
Confidence            9999998532               345688999999998 899984 43   3321    122233333 4578 9999


Q ss_pred             HHHHHHHHhhhcCCCcEEEEecCeeecCC
Q 022471          226 MAEDIILDFSKNSDMAVMILRYFNVIGSD  254 (296)
Q Consensus       226 ~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~  254 (296)
                      ++|.+++.    .+++++++||+.++|+.
T Consensus       136 ~~e~~~~~----~~~~~~~~r~~~~~~~~  160 (308)
T 1qyc_A          136 KVRRAIEA----EGIPYTYVSSNCFAGYF  160 (308)
T ss_dssp             HHHHHHHH----HTCCBEEEECCEEHHHH
T ss_pred             HHHHHHHh----cCCCeEEEEeceecccc
Confidence            99998875    58999999999998853

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.83  E-value=9.6e-20  Score=189.52  Aligned_cols=170  Identities=16%  Similarity=0.096  Sum_probs=129.9

Q ss_pred             ccEEEEEcCCCh-hhHHHHHHHHhCCCeEEEEe-cCCCCcchhhhhhh-hhCCCCCceEEEEccCCCHHHHHHHhhc---
Q 022471           70 VTHVLVTGGAGY-IGSHAALRLLKDSYRVTIVD-NLSRGNIGAVKVLQ-ELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (296)
Q Consensus        70 ~k~vlVTGasG~-IG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (296)
                      +|++|||||++| ||+++++.|+++|++|++++ |+.....+..+.+. +....+.++.++.+|++|.++++++++.   
T Consensus       675 gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~~  754 (1887)
T 2uv8_A          675 DKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYD  754 (1887)
T ss_dssp             TCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence            389999999998 99999999999999999985 44433333333332 2222245788999999999999988763   


Q ss_pred             C--------CCcEEEEcccccCcC-CC------CcChHHHHHHHHHHHHHHHHHHHHc------CCCEEEEEcccccccC
Q 022471          144 N--------AFDAVMHFAAVAYVG-ES------TLDPLKYYHNITSNTLVVLESMARH------GVDTLIYSSTCATYGE  202 (296)
Q Consensus       144 ~--------~~D~vi~~Ag~~~~~-~~------~~~~~~~~~~n~~~t~~ll~~~~~~------~~~riV~~SS~~~~g~  202 (296)
                      .        ++|+||||||+.... ..      .+.....+++|+.++..++.+++..      +.++||++||...+..
T Consensus       755 ~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~g  834 (1887)
T 2uv8_A          755 TEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG  834 (1887)
T ss_dssp             CTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCSS
T ss_pred             hccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhccC
Confidence            2        699999999986544 32      2334668889999988888877422      2369999999765411


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHHHH-HHHhhhcCC--CcEEEEecCeeec
Q 022471          203 PEKMPITEETPQAPINPYGKAKKMAEDI-ILDFSKNSD--MAVMILRYFNVIG  252 (296)
Q Consensus       203 ~~~~~~~e~~~~~~~~~Y~~sK~~~e~~-~~~~~~~~g--i~~~~lrpg~v~G  252 (296)
                                   ....|+.||++.+.+ .+.++.+.+  |++++|+||+|.|
T Consensus       835 -------------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~t  874 (1887)
T 2uv8_A          835 -------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG  874 (1887)
T ss_dssp             -------------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEEC
T ss_pred             -------------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEeccccc
Confidence                         356899999999999 788877633  9999999999995

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.83  E-value=2e-20  Score=185.19  Aligned_cols=172  Identities=18%  Similarity=0.223  Sum_probs=136.3

Q ss_pred             CccEEEEEcCCChhhHHHHHHHH-hCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc---
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLL-KDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (296)
                      .++++|||||+||||++++++|+ ++|+ +|++++|+....++..+.++++...+.++.++.||++|.+++++++++   
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            34899999999999999999999 7999 588999875444444444444433457899999999999999999876   


Q ss_pred             -CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCC
Q 022471          144 -NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (296)
Q Consensus       144 -~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (296)
                       .++|+||||||+.....    +.+..+..+++|+.|+.++.+++.. .. +||++||.+.+-           ..+...
T Consensus       609 ~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~-~l-~iV~~SS~ag~~-----------g~~g~~  675 (795)
T 3slk_A          609 EHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP-DV-ALVLFSSVSGVL-----------GSGGQG  675 (795)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT-TS-EEEEEEETHHHH-----------TCSSCH
T ss_pred             hCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh-CC-EEEEEccHHhcC-----------CCCCCH
Confidence             47999999999865543    3344555777899999999988843 34 899999987652           233478


Q ss_pred             hHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCC
Q 022471          219 PYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSD  254 (296)
Q Consensus       219 ~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~  254 (296)
                      .|+++|...+.+++.++. .|+++++|.||.+-+++
T Consensus       676 ~YaAaka~~~alA~~~~~-~Gi~v~sI~pG~v~t~g  710 (795)
T 3slk_A          676 NYAAANSFLDALAQQRQS-RGLPTRSLAWGPWAEHG  710 (795)
T ss_dssp             HHHHHHHHHHHHHHHHHH-TTCCEEEEEECCCSCCC
T ss_pred             HHHHHHHHHHHHHHHHHH-cCCeEEEEECCeECcch
Confidence            899999988888887765 79999999999987654

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.83  E-value=4.9e-20  Score=163.87  Aligned_cols=148  Identities=17%  Similarity=0.264  Sum_probs=112.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      ++|+||||||+||++++++|+++|++|++++|+........+.+.     ..+++++.+|++|.+++.+++  .++|+||
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~-----~~~v~~v~~Dl~d~~~l~~a~--~~~d~vi   84 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQ-----SLGAIIVKGELDEHEKLVELM--KKVDVVI   84 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHH-----HTTCEEEECCTTCHHHHHHHH--TTCSEEE
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhh-----cCCCEEEEecCCCHHHHHHHH--cCCCEEE
Confidence            589999999999999999999999999999987642221111111     145889999999999999999  5799999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcccccccCCCCCCCCCCCCCCC-CChHHHHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP-INPYGKAKKMAE  228 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~~~-~~~Y~~sK~~~e  228 (296)
                      |+|+...               +.++.++++++++.+ +++||+ |+   ||...    ++..+..| ...| .+|.++|
T Consensus        85 ~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~----~~~~~~~p~~~~y-~sK~~~e  140 (318)
T 2r6j_A           85 SALAFPQ---------------ILDQFKILEAIKVAGNIKRFLP-SD---FGVEE----DRINALPPFEALI-ERKRMIR  140 (318)
T ss_dssp             ECCCGGG---------------STTHHHHHHHHHHHCCCCEEEC-SC---CSSCT----TTCCCCHHHHHHH-HHHHHHH
T ss_pred             ECCchhh---------------hHHHHHHHHHHHhcCCCCEEEe-ec---cccCc----ccccCCCCcchhH-HHHHHHH
Confidence            9998532               345788999999998 899985 33   43211    22222222 3568 9999999


Q ss_pred             HHHHHhhhcCCCcEEEEecCeeecC
Q 022471          229 DIILDFSKNSDMAVMILRYFNVIGS  253 (296)
Q Consensus       229 ~~~~~~~~~~gi~~~~lrpg~v~Gp  253 (296)
                      .+++.    .+++++++||+.+++.
T Consensus       141 ~~~~~----~~~~~~~lr~~~~~~~  161 (318)
T 2r6j_A          141 RAIEE----ANIPYTYVSANCFASY  161 (318)
T ss_dssp             HHHHH----TTCCBEEEECCEEHHH
T ss_pred             HHHHh----cCCCeEEEEcceehhh
Confidence            98875    7899999999988763

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.82  E-value=2.6e-20  Score=188.37  Aligned_cols=170  Identities=16%  Similarity=0.092  Sum_probs=127.8

Q ss_pred             ccEEEEEcCCCh-hhHHHHHHHHhCCCeEEEE-ecCCCCcchhhhhhhhh-CCCCCceEEEEccCCCHHHHHHHhhc---
Q 022471           70 VTHVLVTGGAGY-IGSHAALRLLKDSYRVTIV-DNLSRGNIGAVKVLQEL-FPEPGRLQFIYADLGDAKAVNKFFSE---  143 (296)
Q Consensus        70 ~k~vlVTGasG~-IG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (296)
                      +|+||||||+|| ||+++|++|+++|++|+++ +|+.....+..+.+.+. ...+.++.++.+|++|.+++++++++   
T Consensus       476 GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~e  555 (1688)
T 2pff_A          476 DKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYD  555 (1688)
T ss_dssp             SCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHHS
T ss_pred             CCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence            389999999998 9999999999999999998 45544444444444222 22245788999999999999888753   


Q ss_pred             C--------CCcEEEEcccccCcC-CCC------cChHHHHHHHHHHHHHHHHHHHH------cCCCEEEEEcccccccC
Q 022471          144 N--------AFDAVMHFAAVAYVG-EST------LDPLKYYHNITSNTLVVLESMAR------HGVDTLIYSSTCATYGE  202 (296)
Q Consensus       144 ~--------~~D~vi~~Ag~~~~~-~~~------~~~~~~~~~n~~~t~~ll~~~~~------~~~~riV~~SS~~~~g~  202 (296)
                      .        ++|+||||||+.... ...      +.....+++|+.++..++++++.      ++.++||++||.+.+..
T Consensus       556 ~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~G  635 (1688)
T 2pff_A          556 TEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG  635 (1688)
T ss_dssp             CTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTSS
T ss_pred             hccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhccC
Confidence            2        699999999986544 322      33456788999998887777622      23368999999765411


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHHHH-HHHhhhcC--CCcEEEEecCeeec
Q 022471          203 PEKMPITEETPQAPINPYGKAKKMAEDI-ILDFSKNS--DMAVMILRYFNVIG  252 (296)
Q Consensus       203 ~~~~~~~e~~~~~~~~~Y~~sK~~~e~~-~~~~~~~~--gi~~~~lrpg~v~G  252 (296)
                                   ....|++||++.+.+ .+.++.+.  .|++++|.||+|.|
T Consensus       636 -------------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~T  675 (1688)
T 2pff_A          636 -------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG  675 (1688)
T ss_dssp             -------------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCC
T ss_pred             -------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcC
Confidence                         356899999999999 66666653  39999999999985

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.82  E-value=3.4e-20  Score=165.08  Aligned_cols=152  Identities=15%  Similarity=0.235  Sum_probs=114.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC-CCc-chhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS-RGN-IGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~-~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      ||+|+||||||+||++++++|+++|++|++++|+. ... ....+.+..+.  ..++.++.+|++|.+++.+++  .++|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~--~~~v~~v~~D~~d~~~l~~a~--~~~d   79 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFR--SMGVTIIEGEMEEHEKMVSVL--KQVD   79 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHH--TTCS
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhh--cCCcEEEEecCCCHHHHHHHH--cCCC
Confidence            47899999999999999999999999999999875 211 11112222211  146889999999999999999  5799


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcccccccCCCCCCCCCCCCCCC-CChHHHHHH
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP-INPYGKAKK  225 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~~~-~~~Y~~sK~  225 (296)
                      +|||||+...               +.++.++++++++.+ +++||+ |   +||...    ++..+..| .+.| .+|.
T Consensus        80 ~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y-~sK~  135 (321)
T 3c1o_A           80 IVISALPFPM---------------ISSQIHIINAIKAAGNIKRFLP-S---DFGCEE----DRIKPLPPFESVL-EKKR  135 (321)
T ss_dssp             EEEECCCGGG---------------SGGGHHHHHHHHHHCCCCEEEC-S---CCSSCG----GGCCCCHHHHHHH-HHHH
T ss_pred             EEEECCCccc---------------hhhHHHHHHHHHHhCCccEEec-c---ccccCc----cccccCCCcchHH-HHHH
Confidence            9999998532               456788999999998 899983 3   243211    22222223 4579 9999


Q ss_pred             HHHHHHHHhhhcCCCcEEEEecCeeecC
Q 022471          226 MAEDIILDFSKNSDMAVMILRYFNVIGS  253 (296)
Q Consensus       226 ~~e~~~~~~~~~~gi~~~~lrpg~v~Gp  253 (296)
                      ++|.+++.    .+++++++||+.++++
T Consensus       136 ~~e~~~~~----~~~~~~~lrp~~~~~~  159 (321)
T 3c1o_A          136 IIRRAIEA----AALPYTYVSANCFGAY  159 (321)
T ss_dssp             HHHHHHHH----HTCCBEEEECCEEHHH
T ss_pred             HHHHHHHH----cCCCeEEEEeceeccc
Confidence            99998875    5899999999998874

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.81  E-value=1.1e-21  Score=175.65  Aligned_cols=173  Identities=16%  Similarity=0.135  Sum_probs=125.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-------eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE  143 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~  143 (296)
                      |+|+||||+|+||++++..|+++|+       +|+++|+... ..........+..  ..+.+. .|+++.+++.+++  
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~-~~~~~g~~~dl~~--~~~~~~-~di~~~~~~~~a~--   78 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQA-MKALEGVVMELED--CAFPLL-AGLEATDDPKVAF--   78 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGG-HHHHHHHHHHHHT--TTCTTE-EEEEEESCHHHHT--
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCc-hhhccchhhhhhc--cccccc-CCeEeccChHHHh--
Confidence            6899999999999999999999996       8999986431 0111111111111  112223 5777666667777  


Q ss_pred             CCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcC-CC-EEEEEccccc-ccCCCCCCCC-CCC-CCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VD-TLIYSSTCAT-YGEPEKMPIT-EET-PQAPIN  218 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~~-riV~~SS~~~-~g~~~~~~~~-e~~-~~~~~~  218 (296)
                      .++|+|||+||.....  ..+..+.++.|+.+++++++++++.+ .+ +++++|+... ..     ++. +.. ..+|..
T Consensus        79 ~~~D~Vih~Ag~~~~~--~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~-----~~~~~~~~~~~p~~  151 (327)
T 1y7t_A           79 KDADYALLVGAAPRKA--GMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNA-----LIAYKNAPGLNPRN  151 (327)
T ss_dssp             TTCSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH-----HHHHHTCTTSCGGG
T ss_pred             CCCCEEEECCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhH-----HHHHHHcCCCChhh
Confidence            5799999999986533  34667899999999999999999985 54 7888777431 10     011 112 245667


Q ss_pred             hHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          219 PYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       219 ~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                      +|+.||...|.+...+++.+|++++++||++||||+..
T Consensus       152 ~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~  189 (327)
T 1y7t_A          152 FTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS  189 (327)
T ss_dssp             EEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred             eeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCC
Confidence            89999999999999999889999999999999999854

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.81  E-value=2.9e-19  Score=185.61  Aligned_cols=171  Identities=15%  Similarity=0.100  Sum_probs=127.1

Q ss_pred             ccEEEEEcCCCh-hhHHHHHHHHhCCCeEEEEec-CCCCcchhhhhh-hhhCCCCCceEEEEccCCCHHHHHHHhhc---
Q 022471           70 VTHVLVTGGAGY-IGSHAALRLLKDSYRVTIVDN-LSRGNIGAVKVL-QELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (296)
Q Consensus        70 ~k~vlVTGasG~-IG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (296)
                      +|+||||||+|| ||.++++.|+++|++|+++++ +.....+..+.+ .++...+.++.++.+|++|.+++++++++   
T Consensus       652 gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~~  731 (1878)
T 2uv9_A          652 GKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIYD  731 (1878)
T ss_dssp             TCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHC
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            389999999999 999999999999999999864 332222333333 23322346788999999999999988763   


Q ss_pred             -----C-CCcEEEEcccccCcC-CCC------cChHHHHHHHHHHHHHHHHHHH------HcCCCEEEEEcccccccCCC
Q 022471          144 -----N-AFDAVMHFAAVAYVG-EST------LDPLKYYHNITSNTLVVLESMA------RHGVDTLIYSSTCATYGEPE  204 (296)
Q Consensus       144 -----~-~~D~vi~~Ag~~~~~-~~~------~~~~~~~~~n~~~t~~ll~~~~------~~~~~riV~~SS~~~~g~~~  204 (296)
                           + ++|+||||||+.... ...      +.....+++|+.++..++.+++      +++.++||++||.+.+..  
T Consensus       732 ~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~g--  809 (1878)
T 2uv9_A          732 TKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFG--  809 (1878)
T ss_dssp             SSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSS--
T ss_pred             hhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccC--
Confidence                 2 699999999986543 322      3346678899999887765532      223369999999765411  


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeee-cC
Q 022471          205 KMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVI-GS  253 (296)
Q Consensus       205 ~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~-Gp  253 (296)
                                 ....|+.||++.+.+++.++.+   .+|++++|.||+|. ++
T Consensus       810 -----------g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~  851 (1878)
T 2uv9_A          810 -----------NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTG  851 (1878)
T ss_dssp             -----------CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTT
T ss_pred             -----------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCc
Confidence                       2568999999999998876544   23999999999998 44

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.72  E-value=3.5e-17  Score=177.80  Aligned_cols=174  Identities=13%  Similarity=0.055  Sum_probs=128.6

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCe-EEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (296)
                      .+|++|||||+||||++++++|+++|++ |++++|+..+.+...+.++++...+.++.++.+|++|.+++++++++    
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence            4589999999999999999999999997 77788876555443444443322346788999999999999888765    


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      +++|+||||||+.....    ..+.....+++|+.|+.++.+++.+.  ..++||++||.+..-           +.+..
T Consensus      1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~-----------g~~g~ 2031 (2512)
T 2vz8_A         1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGR-----------GNAGQ 2031 (2512)
T ss_dssp             SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHT-----------TCTTC
T ss_pred             CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcC-----------CCCCc
Confidence            68999999999854332    34455567789999999987776543  247999999977652           23346


Q ss_pred             ChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCC
Q 022471          218 NPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSD  254 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~  254 (296)
                      ..|+++|.+.+.+++.... .|++...+..|.+-+.+
T Consensus      2032 ~~Y~aaKaal~~l~~~rr~-~Gl~~~a~~~g~~~~~G 2067 (2512)
T 2vz8_A         2032 ANYGFANSAMERICEKRRH-DGLPGLAVQWGAIGDVG 2067 (2512)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-TTSCCCEEEECCBCTTS
T ss_pred             HHHHHHHHHHHHHHHHHHH-CCCcEEEEEccCcCCcc
Confidence            7899999999999998766 58999999888765443

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.71  E-value=1.3e-16  Score=173.48  Aligned_cols=172  Identities=11%  Similarity=0.048  Sum_probs=119.4

Q ss_pred             ccEEEEEcCCCh-hhHHHHHHHHhCCCeEEEEecCCCCc-ch-hhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc---
Q 022471           70 VTHVLVTGGAGY-IGSHAALRLLKDSYRVTIVDNLSRGN-IG-AVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (296)
Q Consensus        70 ~k~vlVTGasG~-IG~~la~~L~~~G~~V~~~~r~~~~~-~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (296)
                      +|++|||||++| ||+++|+.|+++|++|++++|+.... .+ +.+..+++...+.++..+.+|++|.+++++++++   
T Consensus      2136 gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i~~ 2215 (3089)
T 3zen_D         2136 DEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWVGT 2215 (3089)
T ss_dssp             CCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHTS
T ss_pred             CCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHHHh
Confidence            499999999999 99999999999999999999865431 11 2223333333346788899999999999887642   


Q ss_pred             ------CCCcEEEEcccc----cCc-----CCCCcChHH----HHHHHHHHHHHHH----HHHHHcCCC---EEEE-Ecc
Q 022471          144 ------NAFDAVMHFAAV----AYV-----GESTLDPLK----YYHNITSNTLVVL----ESMARHGVD---TLIY-SST  196 (296)
Q Consensus       144 ------~~~D~vi~~Ag~----~~~-----~~~~~~~~~----~~~~n~~~t~~ll----~~~~~~~~~---riV~-~SS  196 (296)
                            +++|+||||||+    ...     ....++...    .+++|+.++..++    +.|++.+.+   .+|. .|+
T Consensus      2216 ~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ss 2295 (3089)
T 3zen_D         2216 EQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPGSP 2295 (3089)
T ss_dssp             CCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEECS
T ss_pred             hhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEECCc
Confidence                  579999999997    111     112223333    3677777765554    444444432   2222 232


Q ss_pred             cccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc----CCCcEEEEecCeeecCC
Q 022471          197 CATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN----SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       197 ~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~gi~~~~lrpg~v~Gp~  254 (296)
                      ...             .......|++||++.+.+++.++.|    .+|+++.+.||+|-+..
T Consensus      2296 ~~g-------------~~g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~ 2344 (3089)
T 3zen_D         2296 NRG-------------MFGGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTG 2344 (3089)
T ss_dssp             STT-------------SCSSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECST
T ss_pred             ccc-------------cCCCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCc
Confidence            111             0112457999999999999999998    36999999999998543

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.53  E-value=2e-13  Score=122.41  Aligned_cols=175  Identities=12%  Similarity=-0.021  Sum_probs=116.2

Q ss_pred             CccEEEEEcCCChhhHHHHHHHH-hCCCeEEEEecCCCCcch------------hhhhhhhhCCCCCceEEEEccCCCHH
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLL-KDSYRVTIVDNLSRGNIG------------AVKVLQELFPEPGRLQFIYADLGDAK  135 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~-~~G~~V~~~~r~~~~~~~------------~~~~~~~~~~~~~~~~~~~~Dl~d~~  135 (296)
                      +.|+|||||||+|||.+++.+|+ +.|+.|+++.+.....++            ..+.+++.   +.....+.||++|.+
T Consensus        49 ~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~---G~~a~~i~~Dv~d~e  125 (401)
T 4ggo_A           49 APKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKRE---GLYSVTIDGDAFSDE  125 (401)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHH---TCCEEEEESCTTSHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHc---CCCceeEeCCCCCHH
Confidence            44999999999999999999998 679999998875443321            12233333   567899999999999


Q ss_pred             HHHHHhhc-----CCCcEEEEcccccCcCC-------------C-----------C----------cChHHHHH--HHHH
Q 022471          136 AVNKFFSE-----NAFDAVMHFAAVAYVGE-------------S-----------T----------LDPLKYYH--NITS  174 (296)
Q Consensus       136 ~v~~~~~~-----~~~D~vi~~Ag~~~~~~-------------~-----------~----------~~~~~~~~--~n~~  174 (296)
                      ++++++++     +++|+|||++|......             .           .          ...++.++  ..+.
T Consensus       126 ~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vM  205 (401)
T 4ggo_A          126 IKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVM  205 (401)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHH
Confidence            99988876     89999999999642110             0           0          00111111  1111


Q ss_pred             HH---HHHHHHHHHcC----CCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc-CCCcEEEEe
Q 022471          175 NT---LVVLESMARHG----VDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN-SDMAVMILR  246 (296)
Q Consensus       175 ~t---~~ll~~~~~~~----~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~gi~~~~lr  246 (296)
                      +.   .....++...+    ..++|..|+.+.-   .      ..|......+|.+|++.|..++.++.+ .+++++++.
T Consensus       206 g~s~~s~w~~al~~a~lla~G~siva~SYiGse---~------t~P~Y~~G~mG~AKaaLEa~~r~La~eL~~~~a~v~v  276 (401)
T 4ggo_A          206 GGEDWERWIKQLSKEGLLEEGCITLAYSYIGPE---A------TQALYRKGTIGKAKEHLEATAHRLNKENPSIRAFVSV  276 (401)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCG---G------GHHHHTTSHHHHHHHHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             hhhHHHHHHHHHHhhhcccCCceEEEEeccCcc---e------eecCCCccHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence            11   12233333332    2578888874321   0      011112457899999999999999988 568899999


Q ss_pred             cCeeecCCC
Q 022471          247 YFNVIGSDP  255 (296)
Q Consensus       247 pg~v~Gp~~  255 (296)
                      ++.+-..-.
T Consensus       277 ~~a~vT~As  285 (401)
T 4ggo_A          277 NKGLVTRAS  285 (401)
T ss_dssp             CCCCCCTTG
T ss_pred             cCccccchh
Confidence            988877654

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.25  E-value=2.1e-11  Score=91.70  Aligned_cols=96  Identities=25%  Similarity=0.256  Sum_probs=73.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +++|+|+|+ |++|+++++.|++.| ++|++++|++.+.+    .+.     ...+.++.+|+++.+++.+++  .++|+
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~----~~~-----~~~~~~~~~d~~~~~~~~~~~--~~~d~   72 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALA----VLN-----RMGVATKQVDAKDEAGLAKAL--GGFDA   72 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHH----HHH-----TTTCEEEECCTTCHHHHHHHT--TTCSE
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHH----HHH-----hCCCcEEEecCCCHHHHHHHH--cCCCE
Confidence            479999999 999999999999999 89999997543222    111     145678899999999999988  57999


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEc
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSS  195 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~S  195 (296)
                      |||+++..                  .+..+++++.+.+.+++...+
T Consensus        73 vi~~~~~~------------------~~~~~~~~~~~~g~~~~~~~~  101 (118)
T 3ic5_A           73 VISAAPFF------------------LTPIIAKAAKAAGAHYFDLTE  101 (118)
T ss_dssp             EEECSCGG------------------GHHHHHHHHHHTTCEEECCCS
T ss_pred             EEECCCch------------------hhHHHHHHHHHhCCCEEEecC
Confidence            99999631                  135678888888875554333

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=99.18  E-value=1e-11  Score=110.92  Aligned_cols=171  Identities=13%  Similarity=0.072  Sum_probs=112.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-------eEEEEecCCCC-cchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhh
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRG-NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS  142 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-------~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~  142 (296)
                      ++|+||||+|+||++++..|+..|.       +|+++|++... .+.+.....++......+   ..|+....+..+++ 
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~---~~~i~~~~~~~~al-   81 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL---LAGMTAHADPMTAF-   81 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT---EEEEEEESSHHHHT-
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc---cCcEEEecCcHHHh-
Confidence            7899999999999999999999885       79988864100 111111111121110111   13555445566667 


Q ss_pred             cCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcC-CC-EEEEEccccc---ccCCCCCCCCCCC-CCCC
Q 022471          143 ENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VD-TLIYSSTCAT---YGEPEKMPITEET-PQAP  216 (296)
Q Consensus       143 ~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~~-riV~~SS~~~---~g~~~~~~~~e~~-~~~~  216 (296)
                       .+.|+|||+||.....  .....+.+..|+.+++.+++.+.+.+ .+ +||++|.-.-   |--      .+.. ..++
T Consensus        82 -~~aD~Vi~~ag~~~~~--g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~------~~~~~~~p~  152 (329)
T 1b8p_A           82 -KDADVALLVGARPRGP--GMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIA------MKSAPSLPA  152 (329)
T ss_dssp             -TTCSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH------HHTCTTSCG
T ss_pred             -CCCCEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHH------HHHcCCCCH
Confidence             5799999999975432  23456788999999999999999984 55 8888887220   100      0001 1122


Q ss_pred             CChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.++.-...+...+++..|++...++..+|+|.+
T Consensus       153 ~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~H  190 (329)
T 1b8p_A          153 KNFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNH  190 (329)
T ss_dssp             GGEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCS
T ss_pred             HHEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEecc
Confidence            33577777777788888888788877778877789965

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.17  E-value=3.2e-11  Score=105.65  Aligned_cols=81  Identities=15%  Similarity=0.154  Sum_probs=64.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +|+++||||+||||+++++.|+++|++|++++|+..+.++..+.+...    .++.++.+|++|.+++++++  ..+|+|
T Consensus       119 gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~----~~~~~~~~D~~~~~~~~~~~--~~~Dvl  192 (287)
T 1lu9_A          119 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR----FKVNVTAAETADDASRAEAV--KGAHFV  192 (287)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH----HTCCCEEEECCSHHHHHHHT--TTCSEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc----CCcEEEEecCCCHHHHHHHH--HhCCEE
Confidence            389999999999999999999999999999998654444333333221    23567789999999999988  468999


Q ss_pred             EEccccc
Q 022471          150 MHFAAVA  156 (296)
Q Consensus       150 i~~Ag~~  156 (296)
                      |||||..
T Consensus       193 Vn~ag~g  199 (287)
T 1lu9_A          193 FTAGAIG  199 (287)
T ss_dssp             EECCCTT
T ss_pred             EECCCcc
Confidence            9999864

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=99.03  E-value=6.3e-10  Score=98.56  Aligned_cols=172  Identities=13%  Similarity=0.124  Sum_probs=101.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEec--CCCCcchhhhhhhhhCCC-CCceEEEEccCCCHHHHHHHhhcCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDN--LSRGNIGAVKVLQELFPE-PGRLQFIYADLGDAKAVNKFFSENA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r--~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~  145 (296)
                      |+|+||||+|+||++++..|+..|.  +++++++  +..+.+.....+...... +..+.+...|    +++.+++  .+
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~al--~g   74 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRII--DE   74 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGGG--TT
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHHh--CC
Confidence            4799999999999999999999885  6788886  221111111112211111 1122222211    1234455  67


Q ss_pred             CcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHH-HH
Q 022471          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGK-AK  224 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~-sK  224 (296)
                      .|+|||+||.....  .....+.++.|+.+++.+++++++.+ +.+|+++|--+--...  ........++...+|. +.
T Consensus        75 aD~Vi~~Ag~~~~~--g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv~~~t~--~~~k~~~~p~~rviG~gt~  149 (313)
T 1hye_A           75 SDVVIITSGVPRKE--GMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPVDVMTY--KALVDSKFERNQVFGLGTH  149 (313)
T ss_dssp             CSEEEECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSHHHHHH--HHHHHHCCCTTSEEECTTH
T ss_pred             CCEEEECCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcHHHHHH--HHHHhhCcChhcEEEeCcc
Confidence            99999999975432  23456789999999999999999998 8788777732210000  0000011333445555 55


Q ss_pred             HHHHHHHHHhhhcCCCcEEEEecCeeecCC
Q 022471          225 KMAEDIILDFSKNSDMAVMILRYFNVIGSD  254 (296)
Q Consensus       225 ~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~  254 (296)
                      .-...+...+++..|++...++. .|+|.+
T Consensus       150 LD~~r~~~~la~~lgv~~~~v~~-~v~G~H  178 (313)
T 1hye_A          150 LDSLRFKVAIAKFFGVHIDEVRT-RIIGEH  178 (313)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGEEC-CEEECS
T ss_pred             HHHHHHHHHHHHHhCcCHHHeEE-EEeecc
Confidence            55556666666666665545553 667754

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=99.01  E-value=3.3e-09  Score=94.39  Aligned_cols=115  Identities=12%  Similarity=0.119  Sum_probs=82.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      ++|+||||+|++|..++..|+.+|  ++|+++++++.  ......+.... ....+..    +.+.+++++++  .+.|+
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~-~~~~v~~----~~~t~d~~~al--~gaDv   79 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMD-TGAVVRG----FLGQQQLEAAL--TGMDL   79 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSC-SSCEEEE----EESHHHHHHHH--TTCSE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhccc-ccceEEE----EeCCCCHHHHc--CCCCE
Confidence            789999999999999999999998  79999986543  11111122211 0112221    33456777777  67999


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      |||+||......  ....+.+..|+.+++.+++.+.+.+.+.+|+++|
T Consensus        80 Vi~~ag~~~~~g--~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S  125 (326)
T 1smk_A           80 IIVPAGVPRKPG--MTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS  125 (326)
T ss_dssp             EEECCCCCCCSS--CCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             EEEcCCcCCCCC--CCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            999999754321  2334678999999999999999998777777777

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.95  E-value=3e-09  Score=89.11  Aligned_cols=76  Identities=20%  Similarity=0.188  Sum_probs=57.3

Q ss_pred             ccEEEEEcC----------------CChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC
Q 022471           70 VTHVLVTGG----------------AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD  133 (296)
Q Consensus        70 ~k~vlVTGa----------------sG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d  133 (296)
                      +|+||||||                ||+||.++|++|+++|++|+++++... ..        .   +..+.  .+|+++
T Consensus         8 gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~--------~---~~g~~--~~dv~~   73 (226)
T 1u7z_A            8 HLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP--------T---PPFVK--RVDVMT   73 (226)
T ss_dssp             TCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC--------C---CTTEE--EEECCS
T ss_pred             CCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc--------c---CCCCe--EEccCc
Confidence            399999999                799999999999999999999886431 11        0   12232  578888


Q ss_pred             HHHHHHHhhc--CCCcEEEEcccccCcC
Q 022471          134 AKAVNKFFSE--NAFDAVMHFAAVAYVG  159 (296)
Q Consensus       134 ~~~v~~~~~~--~~~D~vi~~Ag~~~~~  159 (296)
                      .+++.+.+.+  +++|++|||||+....
T Consensus        74 ~~~~~~~v~~~~~~~Dili~~Aav~d~~  101 (226)
T 1u7z_A           74 ALEMEAAVNASVQQQNIFIGCAAVADYR  101 (226)
T ss_dssp             HHHHHHHHHHHGGGCSEEEECCBCCSEE
T ss_pred             HHHHHHHHHHhcCCCCEEEECCcccCCC
Confidence            8776555433  6799999999986543

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.90  E-value=1.1e-08  Score=90.13  Aligned_cols=115  Identities=16%  Similarity=0.126  Sum_probs=77.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEec--CCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDN--LSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r--~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (296)
                      |+|+||||+|++|+.++..|+..|.  +++++|+  +..+.+.....+.........+.+.. |  +    .+++  .+.
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~--~~a   71 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YEDT--AGS   71 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GGGG--TTC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HHHh--CCC
Confidence            5799999999999999999999886  6888876  32211111222222111112333333 2  2    2334  579


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      |+|||+||.....  .....+.+..|+.+++.+++++.+.+.+.+|+++|
T Consensus        72 DvVi~~ag~~~~~--g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~S  119 (303)
T 1o6z_A           72 DVVVITAGIPRQP--GQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (303)
T ss_dssp             SEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             CEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeC
Confidence            9999999975432  22445678999999999999999998777777777

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.85  E-value=8.4e-09  Score=86.66  Aligned_cols=79  Identities=20%  Similarity=0.290  Sum_probs=56.8

Q ss_pred             ccEEEEEcC----------------CChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC
Q 022471           70 VTHVLVTGG----------------AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD  133 (296)
Q Consensus        70 ~k~vlVTGa----------------sG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d  133 (296)
                      +|+||||||                ||++|.++|++|+++|++|++++|......          ..+..+.  ..|+..
T Consensus         3 gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~----------~~~~~~~--~~~v~s   70 (232)
T 2gk4_A            3 AMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP----------EPHPNLS--IREITN   70 (232)
T ss_dssp             CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC----------CCCTTEE--EEECCS
T ss_pred             CCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc----------cCCCCeE--EEEHhH
Confidence            389999999                999999999999999999999997542111          0012344  346666


Q ss_pred             HHHHHHHhhc--CCCcEEEEcccccCcCC
Q 022471          134 AKAVNKFFSE--NAFDAVMHFAAVAYVGE  160 (296)
Q Consensus       134 ~~~v~~~~~~--~~~D~vi~~Ag~~~~~~  160 (296)
                      .+++.+.+.+  +++|++|||||+....+
T Consensus        71 ~~em~~~v~~~~~~~Dili~aAAvsD~~p   99 (232)
T 2gk4_A           71 TKDLLIEMQERVQDYQVLIHSMAVSDYTP   99 (232)
T ss_dssp             HHHHHHHHHHHGGGCSEEEECSBCCSEEE
T ss_pred             HHHHHHHHHHhcCCCCEEEEcCccccccc
Confidence            6555444432  67999999999865543

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.85  E-value=5e-09  Score=96.04  Aligned_cols=83  Identities=14%  Similarity=0.186  Sum_probs=65.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCC---CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDS---YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (296)
                      |++|+|+|| |+||+++++.|++.|   .+|++++|+..+.++..+.+....  +.++..+.+|++|.+++++++++.++
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~--~~~~~~~~~D~~d~~~l~~~l~~~~~   77 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG--YGEIDITTVDADSIEELVALINEVKP   77 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT--CCCCEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc--CCceEEEEecCCCHHHHHHHHHhhCC
Confidence            578999999 999999999999998   389999987655444444433221  13688899999999999999976569


Q ss_pred             cEEEEcccc
Q 022471          147 DAVMHFAAV  155 (296)
Q Consensus       147 D~vi~~Ag~  155 (296)
                      |+|||||+.
T Consensus        78 DvVin~ag~   86 (405)
T 4ina_A           78 QIVLNIALP   86 (405)
T ss_dssp             SEEEECSCG
T ss_pred             CEEEECCCc
Confidence            999999974

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.81  E-value=2.4e-08  Score=77.29  Aligned_cols=102  Identities=12%  Similarity=0.076  Sum_probs=71.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHH-hhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF-FSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~-~~~~~~D~  148 (296)
                      +++|+|+|+ |++|+.+++.|.+.|++|+++++++...    +.+.+     .....+.+|.++.+.+.++ +  .++|+
T Consensus         6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~----~~~~~-----~~~~~~~~d~~~~~~l~~~~~--~~~d~   73 (144)
T 2hmt_A            6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKV----NAYAS-----YATHAVIANATEENELLSLGI--RNFEY   73 (144)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHH----HTTTT-----TCSEEEECCTTCHHHHHTTTG--GGCSE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHH-----hCCEEEEeCCCCHHHHHhcCC--CCCCE
Confidence            468999998 9999999999999999999998753221    11111     1345678999998888765 4  46999


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccccc
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCAT  199 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~  199 (296)
                      ||++++..            .+.|.    .+...+++.+.+++|..++...
T Consensus        74 vi~~~~~~------------~~~~~----~~~~~~~~~~~~~ii~~~~~~~  108 (144)
T 2hmt_A           74 VIVAIGAN------------IQAST----LTTLLLKELDIPNIWVKAQNYY  108 (144)
T ss_dssp             EEECCCSC------------HHHHH----HHHHHHHHTTCSEEEEECCSHH
T ss_pred             EEECCCCc------------hHHHH----HHHHHHHHcCCCeEEEEeCCHH
Confidence            99998631            12222    3555666677778887776443

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.71  E-value=2.1e-08  Score=93.00  Aligned_cols=106  Identities=15%  Similarity=0.167  Sum_probs=73.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +|+|+||| +|++|+++++.|++.|++|++++|+..+.+   + +.+   ....+..+.+|++|.+++.+++  .++|+|
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~---~-la~---~~~~~~~~~~Dv~d~~~l~~~l--~~~DvV   72 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAK---K-LSA---GVQHSTPISLDVNDDAALDAEV--AKHDLV   72 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHH---H-TTT---TCTTEEEEECCTTCHHHHHHHH--TTSSEE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHH---H-HHH---hcCCceEEEeecCCHHHHHHHH--cCCcEE
Confidence            37899998 799999999999999999999987542221   1 111   1124678899999999999988  579999


Q ss_pred             EEcccccCcCCCCcChHHHHHH--H-------HHHHHHHHHHHHHcCC
Q 022471          150 MHFAAVAYVGESTLDPLKYYHN--I-------TSNTLVVLESMARHGV  188 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~--n-------~~~t~~ll~~~~~~~~  188 (296)
                      ||||+......   .....++.  |       ...+..+++++++.|+
T Consensus        73 In~a~~~~~~~---i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv  117 (450)
T 1ff9_A           73 ISLIPYTFHAT---VIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGI  117 (450)
T ss_dssp             EECCC--CHHH---HHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTC
T ss_pred             EECCccccchH---HHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCC
Confidence            99998643211   11111221  1       1246778888888875

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.68  E-value=1.4e-07  Score=73.16  Aligned_cols=74  Identities=18%  Similarity=0.154  Sum_probs=57.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      |++|+|+|+ |.+|+++++.|.++|++|+++++++...    +.+.+     ..+.++.+|.++.+.++++- -.++|+|
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~----~~~~~-----~~~~~~~gd~~~~~~l~~~~-~~~~d~v   74 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKI----ELLED-----EGFDAVIADPTDESFYRSLD-LEGVSAV   74 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHH----HHHHH-----TTCEEEECCTTCHHHHHHSC-CTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHH----HHHHH-----CCCcEEECCCCCHHHHHhCC-cccCCEE
Confidence            478999998 8999999999999999999999754322    22222     24678899999999888762 2478999


Q ss_pred             EEccc
Q 022471          150 MHFAA  154 (296)
Q Consensus       150 i~~Ag  154 (296)
                      |.+.+
T Consensus        75 i~~~~   79 (141)
T 3llv_A           75 LITGS   79 (141)
T ss_dssp             EECCS
T ss_pred             EEecC
Confidence            98765

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.60  E-value=5.6e-07  Score=69.15  Aligned_cols=99  Identities=13%  Similarity=0.046  Sum_probs=67.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+|+|+|+ |.+|..+++.|.+.|++|+++++++...    +.+.+.    ..+.++.+|.++.+.+.+..- .+.|+||
T Consensus         5 m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~----~~~~~~----~~~~~~~~d~~~~~~l~~~~~-~~~d~vi   74 (140)
T 1lss_A            5 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDIC----KKASAE----IDALVINGDCTKIKTLEDAGI-EDADMYI   74 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH----HHHHHH----CSSEEEESCTTSHHHHHHTTT-TTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH----HHHHHh----cCcEEEEcCCCCHHHHHHcCc-ccCCEEE
Confidence            78999987 9999999999999999999998753221    222211    235677899999887765421 4799999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      ++.+.         .    +.|.    .+...+++.+.+++|..++
T Consensus        75 ~~~~~---------~----~~~~----~~~~~~~~~~~~~ii~~~~  103 (140)
T 1lss_A           75 AVTGK---------E----EVNL----MSSLLAKSYGINKTIARIS  103 (140)
T ss_dssp             ECCSC---------H----HHHH----HHHHHHHHTTCCCEEEECS
T ss_pred             EeeCC---------c----hHHH----HHHHHHHHcCCCEEEEEec
Confidence            99742         1    1222    3445555666667776544

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.49  E-value=1.5e-07  Score=87.51  Aligned_cols=77  Identities=18%  Similarity=0.227  Sum_probs=59.5

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      .+++|+|+|| |++|+++++.|++. |++|++++|+..+.+   +..+.     .++..+.+|+.|.+++.+++  .++|
T Consensus        22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~---~la~~-----~~~~~~~~D~~d~~~l~~~l--~~~D   90 (467)
T 2axq_A           22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQ---ALAKP-----SGSKAISLDVTDDSALDKVL--ADND   90 (467)
T ss_dssp             -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHH---HHHGG-----GTCEEEECCTTCHHHHHHHH--HTSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHH---HHHHh-----cCCcEEEEecCCHHHHHHHH--cCCC
Confidence            3489999997 99999999999998 789999987543322   21111     13567789999999998888  4799


Q ss_pred             EEEEccccc
Q 022471          148 AVMHFAAVA  156 (296)
Q Consensus       148 ~vi~~Ag~~  156 (296)
                      +|||+++..
T Consensus        91 vVIn~tp~~   99 (467)
T 2axq_A           91 VVISLIPYT   99 (467)
T ss_dssp             EEEECSCGG
T ss_pred             EEEECCchh
Confidence            999999864

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.47  E-value=1.8e-07  Score=76.86  Aligned_cols=99  Identities=14%  Similarity=0.077  Sum_probs=64.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHh---hcCCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFF---SENAF  146 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~---~~~~~  146 (296)
                      +++|+||||+|+||.++++.+...|++|+++++++...    +.+++.   +.. .  ..|.++.+..+.+.   ...++
T Consensus        39 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~----~~~~~~---g~~-~--~~d~~~~~~~~~~~~~~~~~~~  108 (198)
T 1pqw_A           39 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKR----EMLSRL---GVE-Y--VGDSRSVDFADEILELTDGYGV  108 (198)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHH----HHHHTT---CCS-E--EEETTCSTHHHHHHHHTTTCCE
T ss_pred             CCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHHc---CCC-E--EeeCCcHHHHHHHHHHhCCCCC
Confidence            38999999999999999999999999999998653221    222222   111 1  24666654433333   22469


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccc
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCA  198 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~  198 (296)
                      |++|+|+|..                  .....++.+++.  +++|.+++..
T Consensus       109 D~vi~~~g~~------------------~~~~~~~~l~~~--G~~v~~g~~~  140 (198)
T 1pqw_A          109 DVVLNSLAGE------------------AIQRGVQILAPG--GRFIELGKKD  140 (198)
T ss_dssp             EEEEECCCTH------------------HHHHHHHTEEEE--EEEEECSCGG
T ss_pred             eEEEECCchH------------------HHHHHHHHhccC--CEEEEEcCCC
Confidence            9999999720                  123344545433  5899988754

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.45  E-value=4.9e-07  Score=81.60  Aligned_cols=92  Identities=17%  Similarity=0.187  Sum_probs=68.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+|+|.|| |++|+.+++.|++ .++|.+++++.++.+.       .   ...+..+.+|+.|.+++.+++  .+.|+||
T Consensus        17 mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~-------~---~~~~~~~~~d~~d~~~l~~~~--~~~DvVi   82 (365)
T 3abi_A           17 MKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEK-------V---KEFATPLKVDASNFDKLVEVM--KEFELVI   82 (365)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHH-------H---TTTSEEEECCTTCHHHHHHHH--TTCSEEE
T ss_pred             cEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHH-------H---hccCCcEEEecCCHHHHHHHH--hCCCEEE
Confidence            68999998 9999999998865 5899999875433221       1   134567789999999999999  5789999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEc
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSS  195 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~S  195 (296)
                      |+++...                  ...++++|.+.+. ++|=+|
T Consensus        83 ~~~p~~~------------------~~~v~~~~~~~g~-~yvD~s  108 (365)
T 3abi_A           83 GALPGFL------------------GFKSIKAAIKSKV-DMVDVS  108 (365)
T ss_dssp             ECCCGGG------------------HHHHHHHHHHHTC-EEEECC
T ss_pred             EecCCcc------------------cchHHHHHHhcCc-ceEeee
Confidence            9986321                  1247778888774 666554

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.45  E-value=2.4e-06  Score=75.44  Aligned_cols=115  Identities=18%  Similarity=0.189  Sum_probs=77.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      |+|.|+||+|++|..++..|+..|  .+|+++|++.  .......+.... ...++....    ..+++++++  .+.|+
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~-~~~~l~~~~----~t~d~~~a~--~~aDv   71 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIE-TRATVKGYL----GPEQLPDCL--KGCDV   71 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSS-SSCEEEEEE----SGGGHHHHH--TTCSE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccC-cCceEEEec----CCCCHHHHh--CCCCE
Confidence            479999999999999999999988  7899999865  222222222211 111222211    113455556  57999


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcc
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS  196 (296)
                      ||++||......  ....+.+..|+...+.+++.+.+.... ++|++|-
T Consensus        72 Vvi~ag~~~~~g--~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sN  118 (314)
T 1mld_A           72 VVIPAGVPRKPG--MTRDDLFNTNATIVATLTAACAQHCPDAMICIISN  118 (314)
T ss_dssp             EEECCSCCCCTT--CCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             EEECCCcCCCCC--CcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence            999999754321  233456889999999999999987653 7777654

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.42  E-value=4.7e-06  Score=65.60  Aligned_cols=98  Identities=14%  Similarity=0.120  Sum_probs=67.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHH-hhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF-FSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~-~~~~~~D~v  149 (296)
                      ++|+|.|+ |.+|..+++.|.+.|++|+++++++...+.+    ..    ......+.+|..+.+.+.++ +  .++|+|
T Consensus        20 ~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~----~~----~~g~~~~~~d~~~~~~l~~~~~--~~ad~V   88 (155)
T 2g1u_A           20 KYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRL----NS----EFSGFTVVGDAAEFETLKECGM--EKADMV   88 (155)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGS----CT----TCCSEEEESCTTSHHHHHTTTG--GGCSEE
T ss_pred             CcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH----Hh----cCCCcEEEecCCCHHHHHHcCc--ccCCEE
Confidence            78999996 9999999999999999999999765432211    10    12355677899988777664 4  468999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHH-cCCCEEEEEcc
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMAR-HGVDTLIYSST  196 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~-~~~~riV~~SS  196 (296)
                      |.+.+.         .    ..    ...++..+++ .+..++|...+
T Consensus        89 i~~~~~---------~----~~----~~~~~~~~~~~~~~~~iv~~~~  119 (155)
T 2g1u_A           89 FAFTND---------D----ST----NFFISMNARYMFNVENVIARVY  119 (155)
T ss_dssp             EECSSC---------H----HH----HHHHHHHHHHTSCCSEEEEECS
T ss_pred             EEEeCC---------c----HH----HHHHHHHHHHHCCCCeEEEEEC
Confidence            988752         1    11    1234445555 45567776665

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.38  E-value=3e-07  Score=72.92  Aligned_cols=72  Identities=18%  Similarity=0.173  Sum_probs=54.2

Q ss_pred             ChhhHHHHHHHHhCCCeEEEEecCCCCcch---hhhhhhhhCCCCCceEEEEccCCCH--HHHHHHhhc-----CCCcEE
Q 022471           80 GYIGSHAALRLLKDSYRVTIVDNLSRGNIG---AVKVLQELFPEPGRLQFIYADLGDA--KAVNKFFSE-----NAFDAV  149 (296)
Q Consensus        80 G~IG~~la~~L~~~G~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~~~~Dl~d~--~~v~~~~~~-----~~~D~v  149 (296)
                      |.++.++++.|++.|++|++..|+......   ..+.+++.   +.++..+.+|++++  ++++++++.     ++ |++
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~---G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVL  101 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQA---GMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVL  101 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHT---TCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEE
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHc---CCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEE
Confidence            568999999999999999998876543322   23333332   45677889999999  888887754     56 999


Q ss_pred             EEcccc
Q 022471          150 MHFAAV  155 (296)
Q Consensus       150 i~~Ag~  155 (296)
                      |||||.
T Consensus       102 VnnAgg  107 (157)
T 3gxh_A          102 VHCLAN  107 (157)
T ss_dssp             EECSBS
T ss_pred             EECCCC
Confidence            999985

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.34  E-value=1.5e-06  Score=77.29  Aligned_cols=116  Identities=16%  Similarity=0.124  Sum_probs=76.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--e-----EEEEecCCC--CcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHh
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--R-----VTIVDNLSR--GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFF  141 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~-----V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~  141 (296)
                      ++|.||||+|+||++++..|+..|.  +     ++++|++..  ..+.....+.... . .-..    ++....+..+.+
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~-~-~~~~----~~~~~~~~~~~~   77 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCA-L-PLLK----DVIATDKEEIAF   77 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTC-C-TTEE----EEEEESCHHHHT
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhh-h-cccC----CEEEcCCcHHHh
Confidence            7899999999999999999998875  5     888886421  1111122222211 0 1111    111112233444


Q ss_pred             hcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC--EEEEEcc
Q 022471          142 SENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD--TLIYSST  196 (296)
Q Consensus       142 ~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~--riV~~SS  196 (296)
                        .+.|+||++||....+  ..+..+.++.|+..++.+++.+.+.+.+  +++.+|.
T Consensus        78 --~daDvVvitAg~prkp--G~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           78 --KDLDVAILVGSMPRRD--GMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             --TTCSEEEECCSCCCCT--TCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             --CCCCEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence              5799999999975432  2345567899999999999999999864  5777765

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.33  E-value=2.1e-06  Score=76.49  Aligned_cols=116  Identities=13%  Similarity=0.098  Sum_probs=74.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      +++|.|+|++|++|+.++..++..|  .+|+++|.+..+.+.....+........++.+       ..+..+.+  .+.|
T Consensus         8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-------t~d~~~al--~dAD   78 (343)
T 3fi9_A            8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-------TSDIKEAL--TDAK   78 (343)
T ss_dssp             SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-------ESCHHHHH--TTEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-------cCCHHHHh--CCCC
Confidence            3789999999999999999999998  48999987543322222223322111112221       12234445  5789


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCE--EEEEcc
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT--LIYSST  196 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~r--iV~~SS  196 (296)
                      +||.+||....+  ..+..+.++.|....+.+.+.+.+...+-  ++.+|.
T Consensus        79 vVvitaG~p~kp--G~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsN  127 (343)
T 3fi9_A           79 YIVSSGGAPRKE--GMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFN  127 (343)
T ss_dssp             EEEECCC---------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSS
T ss_pred             EEEEccCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecC
Confidence            999999975322  23456678999999999999999887544  455554

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.24  E-value=4.9e-06  Score=65.29  Aligned_cols=76  Identities=21%  Similarity=0.366  Sum_probs=57.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHH-hhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF-FSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~-~~~~~~D~v  149 (296)
                      ++|+|+|+ |.+|+.+++.|.+.|++|+++++++..   ..+.+....  ..++.++.+|.++.+.++++ +  .+.|.|
T Consensus         4 ~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~---~~~~~~~~~--~~~~~~i~gd~~~~~~l~~a~i--~~ad~v   75 (153)
T 1id1_A            4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPED---DIKQLEQRL--GDNADVIPGDSNDSSVLKKAGI--DRCRAI   75 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHH---HHHHHHHHH--CTTCEEEESCTTSHHHHHHHTT--TTCSEE
T ss_pred             CcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChH---HHHHHHHhh--cCCCeEEEcCCCCHHHHHHcCh--hhCCEE
Confidence            67999996 999999999999999999999975311   111222111  13578899999999998876 5  578999


Q ss_pred             EEccc
Q 022471          150 MHFAA  154 (296)
Q Consensus       150 i~~Ag  154 (296)
                      |.+.+
T Consensus        76 i~~~~   80 (153)
T 1id1_A           76 LALSD   80 (153)
T ss_dssp             EECSS
T ss_pred             EEecC
Confidence            98764

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.20  E-value=3.1e-06  Score=74.57  Aligned_cols=83  Identities=12%  Similarity=0.119  Sum_probs=57.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +|+++|+|+ ||+|++++..|++.|+ +|+++.|+....+++.+..+++... ........++.+.+++.+.+  .+.|+
T Consensus       154 gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~-~~~~~~~~~~~~~~~l~~~l--~~aDi  229 (315)
T 3tnl_A          154 GKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSK-TDCKAQLFDIEDHEQLRKEI--AESVI  229 (315)
T ss_dssp             TSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHH-SSCEEEEEETTCHHHHHHHH--HTCSE
T ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhh-cCCceEEeccchHHHHHhhh--cCCCE
Confidence            389999997 8999999999999999 8999998733233333332222111 12334455777777777777  46899


Q ss_pred             EEEccccc
Q 022471          149 VMHFAAVA  156 (296)
Q Consensus       149 vi~~Ag~~  156 (296)
                      |||+....
T Consensus       230 IINaTp~G  237 (315)
T 3tnl_A          230 FTNATGVG  237 (315)
T ss_dssp             EEECSSTT
T ss_pred             EEECccCC
Confidence            99987653

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.19  E-value=3.2e-06  Score=75.10  Aligned_cols=75  Identities=13%  Similarity=0.136  Sum_probs=51.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc---CCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NAF  146 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---~~~  146 (296)
                      +++|+||||+|+||..+++.+...|++|++++++..+.    +.++++   +..   ..+|.++.+++.+.+.+   +++
T Consensus       146 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~----~~~~~~---g~~---~~~d~~~~~~~~~~~~~~~~~~~  215 (333)
T 1v3u_A          146 GETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKI----AYLKQI---GFD---AAFNYKTVNSLEEALKKASPDGY  215 (333)
T ss_dssp             SCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHH----HHHHHT---TCS---EEEETTSCSCHHHHHHHHCTTCE
T ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHhc---CCc---EEEecCCHHHHHHHHHHHhCCCC
Confidence            38999999999999999999999999999998754322    222332   111   23466652233322221   579


Q ss_pred             cEEEEccc
Q 022471          147 DAVMHFAA  154 (296)
Q Consensus       147 D~vi~~Ag  154 (296)
                      |++|+|+|
T Consensus       216 d~vi~~~g  223 (333)
T 1v3u_A          216 DCYFDNVG  223 (333)
T ss_dssp             EEEEESSC
T ss_pred             eEEEECCC
Confidence            99999998

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.18  E-value=1.7e-06  Score=76.71  Aligned_cols=75  Identities=11%  Similarity=0.032  Sum_probs=51.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHH---HhhcCCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNK---FFSENAF  146 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~---~~~~~~~  146 (296)
                      +++|+||||+|+||..+++.+...|++|+++++++.+.    +.++++   +.. .  ..|.++.+..++   .....++
T Consensus       141 g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~----~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~~~~~  210 (327)
T 1qor_A          141 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKA----QSALKA---GAW-Q--VINYREEDLVERLKEITGGKKV  210 (327)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHH----HHHHHH---TCS-E--EEETTTSCHHHHHHHHTTTCCE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHHc---CCC-E--EEECCCccHHHHHHHHhCCCCc
Confidence            38999999999999999999999999999998753322    222332   111 1  246555443333   3323479


Q ss_pred             cEEEEccc
Q 022471          147 DAVMHFAA  154 (296)
Q Consensus       147 D~vi~~Ag  154 (296)
                      |++|+|+|
T Consensus       211 D~vi~~~g  218 (327)
T 1qor_A          211 RVVYDSVG  218 (327)
T ss_dssp             EEEEECSC
T ss_pred             eEEEECCc
Confidence            99999998

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.18  E-value=2.3e-06  Score=76.03  Aligned_cols=75  Identities=13%  Similarity=0.069  Sum_probs=52.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHH---HHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK---AVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~v~~~~~~~~~D  147 (296)
                      ++|+||||+|+||..+++.+...|++|++++++..+.    +.++++   +.. .  ..|.++.+   .+.+.....++|
T Consensus       147 ~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~----~~~~~~---g~~-~--~~d~~~~~~~~~i~~~~~~~~~d  216 (333)
T 1wly_A          147 DYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKA----ETARKL---GCH-H--TINYSTQDFAEVVREITGGKGVD  216 (333)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHH----HHHHHH---TCS-E--EEETTTSCHHHHHHHHHTTCCEE
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHc---CCC-E--EEECCCHHHHHHHHHHhCCCCCe
Confidence            8999999999999999999999999999998754222    222333   111 1  23555543   333333334799


Q ss_pred             EEEEcccc
Q 022471          148 AVMHFAAV  155 (296)
Q Consensus       148 ~vi~~Ag~  155 (296)
                      ++|+|+|.
T Consensus       217 ~vi~~~g~  224 (333)
T 1wly_A          217 VVYDSIGK  224 (333)
T ss_dssp             EEEECSCT
T ss_pred             EEEECCcH
Confidence            99999984

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.16  E-value=2.6e-06  Score=76.12  Aligned_cols=74  Identities=20%  Similarity=0.313  Sum_probs=51.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc---CCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---~~~D  147 (296)
                      ++|||+||+|+||..+++.+...|++|+++++++.+.    +.++++   +..   ...|+++.+++.+.+.+   +++|
T Consensus       171 ~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~----~~~~~~---g~~---~~~d~~~~~~~~~~~~~~~~~~~D  240 (347)
T 2hcy_A          171 HWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKE----ELFRSI---GGE---VFIDFTKEKDIVGAVLKATDGGAH  240 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHH----HHHHHT---TCC---EEEETTTCSCHHHHHHHHHTSCEE
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHH----HHHHHc---CCc---eEEecCccHhHHHHHHHHhCCCCC
Confidence            8999999999999999999999999999998765433    222222   111   12476643333333221   3799


Q ss_pred             EEEEccc
Q 022471          148 AVMHFAA  154 (296)
Q Consensus       148 ~vi~~Ag  154 (296)
                      +||+++|
T Consensus       241 ~vi~~~g  247 (347)
T 2hcy_A          241 GVINVSV  247 (347)
T ss_dssp             EEEECSS
T ss_pred             EEEECCC
Confidence            9999998

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.12  E-value=3.8e-06  Score=75.36  Aligned_cols=76  Identities=11%  Similarity=0.031  Sum_probs=52.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHH---HHHHhhcCCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKA---VNKFFSENAF  146 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---v~~~~~~~~~  146 (296)
                      +++|+||||+|+||..+++.+...|++|+++++++.+.+    .++++   +..   ..+|..+.+.   +.+.....++
T Consensus       163 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~----~~~~~---g~~---~~~~~~~~~~~~~~~~~~~~~~~  232 (354)
T 2j8z_A          163 GDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQ----MAEKL---GAA---AGFNYKKEDFSEATLKFTKGAGV  232 (354)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HHHHH---TCS---EEEETTTSCHHHHHHHHTTTSCE
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH----HHHHc---CCc---EEEecCChHHHHHHHHHhcCCCc
Confidence            389999999999999999999999999999987543322    22333   111   1245555433   3333322479


Q ss_pred             cEEEEcccc
Q 022471          147 DAVMHFAAV  155 (296)
Q Consensus       147 D~vi~~Ag~  155 (296)
                      |++|+|+|.
T Consensus       233 d~vi~~~G~  241 (354)
T 2j8z_A          233 NLILDCIGG  241 (354)
T ss_dssp             EEEEESSCG
T ss_pred             eEEEECCCc
Confidence            999999984

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.10  E-value=1.5e-05  Score=64.38  Aligned_cols=72  Identities=17%  Similarity=0.123  Sum_probs=55.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHH--hhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF--FSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~--~~~~~~D  147 (296)
                      ++|+|.| .|.+|..+++.|.+. |++|+++++++...    +.+.+     ..+..+.+|.++.+.+.++  +  .+.|
T Consensus        40 ~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~----~~~~~-----~g~~~~~gd~~~~~~l~~~~~~--~~ad  107 (183)
T 3c85_A           40 AQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAA----QQHRS-----EGRNVISGDATDPDFWERILDT--GHVK  107 (183)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHH----HHHHH-----TTCCEEECCTTCHHHHHTBCSC--CCCC
T ss_pred             CcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHH----HHHHH-----CCCCEEEcCCCCHHHHHhccCC--CCCC
Confidence            6899998 599999999999999 99999999754322    22222     2356778999999888776  4  5789


Q ss_pred             EEEEccc
Q 022471          148 AVMHFAA  154 (296)
Q Consensus       148 ~vi~~Ag  154 (296)
                      +||.+.+
T Consensus       108 ~vi~~~~  114 (183)
T 3c85_A          108 LVLLAMP  114 (183)
T ss_dssp             EEEECCS
T ss_pred             EEEEeCC
Confidence            9998764

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.09  E-value=5e-06  Score=74.50  Aligned_cols=75  Identities=16%  Similarity=0.240  Sum_probs=51.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHH---HHHhhcCCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAV---NKFFSENAF  146 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v---~~~~~~~~~  146 (296)
                      +++|+|+||+|+||..+++.+...|++|+++++++.+.+    .++++   +.. .  ..|..+.+..   .+.....++
T Consensus       171 g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~----~~~~~---ga~-~--~~d~~~~~~~~~~~~~~~~~~~  240 (351)
T 1yb5_A          171 GESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQK----IVLQN---GAH-E--VFNHREVNYIDKIKKYVGEKGI  240 (351)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH----HHHHT---TCS-E--EEETTSTTHHHHHHHHHCTTCE
T ss_pred             cCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHH----HHHHc---CCC-E--EEeCCCchHHHHHHHHcCCCCc
Confidence            389999999999999999999999999999987543222    22332   111 1  2455554333   333322479


Q ss_pred             cEEEEccc
Q 022471          147 DAVMHFAA  154 (296)
Q Consensus       147 D~vi~~Ag  154 (296)
                      |++|+|+|
T Consensus       241 D~vi~~~G  248 (351)
T 1yb5_A          241 DIIIEMLA  248 (351)
T ss_dssp             EEEEESCH
T ss_pred             EEEEECCC
Confidence            99999998

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.07  E-value=6.3e-06  Score=68.66  Aligned_cols=74  Identities=16%  Similarity=0.146  Sum_probs=56.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+|+|+|+ |.+|+++++.|.++|++|+++++++...+    .+.+.    .++.++.+|.++.+.++++-- .+.|+||
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~----~l~~~----~~~~~i~gd~~~~~~l~~a~i-~~ad~vi   70 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCE----EFAKK----LKATIIHGDGSHKEILRDAEV-SKNDVVV   70 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHH----HHHHH----SSSEEEESCTTSHHHHHHHTC-CTTCEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHH----HHHHH----cCCeEEEcCCCCHHHHHhcCc-ccCCEEE
Confidence            57999996 99999999999999999999996543222    22111    246788999999999887622 5789999


Q ss_pred             Eccc
Q 022471          151 HFAA  154 (296)
Q Consensus       151 ~~Ag  154 (296)
                      -+.+
T Consensus        71 ~~~~   74 (218)
T 3l4b_C           71 ILTP   74 (218)
T ss_dssp             ECCS
T ss_pred             EecC
Confidence            7654

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.04  E-value=5.4e-06  Score=74.83  Aligned_cols=104  Identities=22%  Similarity=0.238  Sum_probs=67.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      .++|+|+|+ |+||..+++.|...|++|++++|++.+.+    .+.+...  ..   +.+|.++.+++.+++  .+.|+|
T Consensus       166 ~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~----~~~~~~g--~~---~~~~~~~~~~l~~~~--~~~DvV  233 (369)
T 2eez_A          166 PASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQ----YLDDVFG--GR---VITLTATEANIKKSV--QHADLL  233 (369)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH----HHHHHTT--TS---EEEEECCHHHHHHHH--HHCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHH----HHHHhcC--ce---EEEecCCHHHHHHHH--hCCCEE
Confidence            389999999 99999999999999999999997543322    2222111  22   456788888888888  468999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccc
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCA  198 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~  198 (296)
                      |++++......    +       ...+...++.|++  .+.||.+|+..
T Consensus       234 i~~~g~~~~~~----~-------~li~~~~l~~mk~--gg~iV~v~~~~  269 (369)
T 2eez_A          234 IGAVLVPGAKA----P-------KLVTRDMLSLMKE--GAVIVDVAVDQ  269 (369)
T ss_dssp             EECCC------------------CCSCHHHHTTSCT--TCEEEECC---
T ss_pred             EECCCCCcccc----c-------hhHHHHHHHhhcC--CCEEEEEecCC
Confidence            99998642100    0       0012335555543  35899998753

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=98.03  E-value=1.4e-05  Score=71.42  Aligned_cols=98  Identities=7%  Similarity=0.076  Sum_probs=63.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH---HHHHHHhhcCCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAF  146 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~  146 (296)
                      +++|+|+||+|+||...++.+...|++|+++++++.+.+    .++++   +.. ..  .|..+.   +.+.++....++
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~----~~~~~---Ga~-~~--~~~~~~~~~~~v~~~~~~~g~  234 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIA----LLKDI---GAA-HV--LNEKAPDFEATLREVMKAEQP  234 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHH----HHHHH---TCS-EE--EETTSTTHHHHHHHHHHHHCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHHc---CCC-EE--EECCcHHHHHHHHHHhcCCCC
Confidence            378999999999999999999999999999987554432    22333   111 22  233332   334444332479


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccc
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTC  197 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~  197 (296)
                      |++|+|+|..                  .....++.++.  .+++|.+++.
T Consensus       235 D~vid~~g~~------------------~~~~~~~~l~~--~G~iv~~G~~  265 (349)
T 3pi7_A          235 RIFLDAVTGP------------------LASAIFNAMPK--RARWIIYGRL  265 (349)
T ss_dssp             CEEEESSCHH------------------HHHHHHHHSCT--TCEEEECCCS
T ss_pred             cEEEECCCCh------------------hHHHHHhhhcC--CCEEEEEecc
Confidence            9999999831                  11234454543  3689988764

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=98.03  E-value=2.6e-05  Score=66.47  Aligned_cols=79  Identities=20%  Similarity=0.228  Sum_probs=55.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCC-------------------CCcchhhhhhhhhCCCCCceEEEEcc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS-------------------RGNIGAVKVLQELFPEPGRLQFIYAD  130 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~D  130 (296)
                      ++|+|.|+ |++|+++++.|++.|. +++++|++.                   .+.+.+.+.+.+..+. .++..+..+
T Consensus        32 ~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~-~~v~~~~~~  109 (249)
T 1jw9_B           32 SRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPH-IAITPVNAL  109 (249)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTT-SEEEEECSC
T ss_pred             CeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCC-cEEEEEecc
Confidence            78999995 8999999999999997 899998765                   2233333444444322 345666666


Q ss_pred             CCCHHHHHHHhhcCCCcEEEEccc
Q 022471          131 LGDAKAVNKFFSENAFDAVMHFAA  154 (296)
Q Consensus       131 l~d~~~v~~~~~~~~~D~vi~~Ag  154 (296)
                      ++ .+.+.+++  .++|+||.+..
T Consensus       110 ~~-~~~~~~~~--~~~DvVi~~~d  130 (249)
T 1jw9_B          110 LD-DAELAALI--AEHDLVLDCTD  130 (249)
T ss_dssp             CC-HHHHHHHH--HTSSEEEECCS
T ss_pred             CC-HhHHHHHH--hCCCEEEEeCC
Confidence            65 35566667  46899998763

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.03  E-value=3.1e-06  Score=73.14  Aligned_cols=74  Identities=19%  Similarity=0.280  Sum_probs=49.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+++|+|+ |++|+++++.|++.|++|++++|+..+.+++.+.+...    ..+.  ..|+   +++.   + .++|+||
T Consensus       120 k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~----~~~~--~~~~---~~~~---~-~~~DivV  185 (271)
T 1nyt_A          120 LRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT----GSIQ--ALSM---DELE---G-HEFDLII  185 (271)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG----SSEE--ECCS---GGGT---T-CCCSEEE
T ss_pred             CEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhcc----CCee--EecH---HHhc---c-CCCCEEE
Confidence            89999998 89999999999999999999987654333333322211    1221  2333   2221   1 4799999


Q ss_pred             EcccccCc
Q 022471          151 HFAAVAYV  158 (296)
Q Consensus       151 ~~Ag~~~~  158 (296)
                      ||++....
T Consensus       186 n~t~~~~~  193 (271)
T 1nyt_A          186 NATSSGIS  193 (271)
T ss_dssp             ECCSCGGG
T ss_pred             ECCCCCCC
Confidence            99987543

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.00  E-value=7.3e-06  Score=73.49  Aligned_cols=74  Identities=15%  Similarity=0.050  Sum_probs=50.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHH---HHHHHhhcCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK---AVNKFFSENAF  146 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~v~~~~~~~~~  146 (296)
                      ++|+||||+|+||..+++.+...|+ +|++++++..+.    +.+.+..  +..   ..+|..+.+   .+.+... +++
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~----~~~~~~~--g~~---~~~d~~~~~~~~~~~~~~~-~~~  231 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKC----ILLTSEL--GFD---AAINYKKDNVAEQLRESCP-AGV  231 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHH----HHHHHTS--CCS---EEEETTTSCHHHHHHHHCT-TCE
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHH----HHHHHHc--CCc---eEEecCchHHHHHHHHhcC-CCC
Confidence            7899999999999999999999999 999998653222    2222211  111   134665533   3333332 379


Q ss_pred             cEEEEccc
Q 022471          147 DAVMHFAA  154 (296)
Q Consensus       147 D~vi~~Ag  154 (296)
                      |++|+|+|
T Consensus       232 d~vi~~~G  239 (357)
T 2zb4_A          232 DVYFDNVG  239 (357)
T ss_dssp             EEEEESCC
T ss_pred             CEEEECCC
Confidence            99999998

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.99  E-value=1.4e-05  Score=71.06  Aligned_cols=76  Identities=17%  Similarity=0.071  Sum_probs=52.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH---HHHHHHhhcCCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAF  146 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~  146 (296)
                      +++|+|+||+|+||..+++.+...|++|+++++++.+.+.+    +++   +.. ..  .|..+.   +.+.+.....++
T Consensus       145 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~~l---ga~-~~--~~~~~~~~~~~~~~~~~~~g~  214 (340)
T 3gms_A          145 NDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEEL----LRL---GAA-YV--IDTSTAPLYETVMELTNGIGA  214 (340)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHH----HHH---TCS-EE--EETTTSCHHHHHHHHTTTSCE
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HhC---CCc-EE--EeCCcccHHHHHHHHhCCCCC
Confidence            38999999999999999999988999999999766544332    222   122 12  244433   334444333479


Q ss_pred             cEEEEcccc
Q 022471          147 DAVMHFAAV  155 (296)
Q Consensus       147 D~vi~~Ag~  155 (296)
                      |++|+|+|.
T Consensus       215 Dvvid~~g~  223 (340)
T 3gms_A          215 DAAIDSIGG  223 (340)
T ss_dssp             EEEEESSCH
T ss_pred             cEEEECCCC
Confidence            999999984

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.99  E-value=8.1e-06  Score=72.52  Aligned_cols=101  Identities=18%  Similarity=0.145  Sum_probs=63.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHH---HHHHHhhcCCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK---AVNKFFSENAF  146 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~v~~~~~~~~~  146 (296)
                      +++|||+||+|+||..+++.+...|++|+++++++.+.+.+.   +++   +.. .  ..|..+.+   .+.+.. ..++
T Consensus       150 g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~---~~~---g~~-~--~~~~~~~~~~~~~~~~~-~~~~  219 (336)
T 4b7c_A          150 GETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLV---EEL---GFD-G--AIDYKNEDLAAGLKREC-PKGI  219 (336)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH---HTT---CCS-E--EEETTTSCHHHHHHHHC-TTCE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHc---CCC-E--EEECCCHHHHHHHHHhc-CCCc
Confidence            389999999999999999999999999999986543322211   222   111 1  23544433   333333 2479


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccc
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATY  200 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~  200 (296)
                      |++|+|+|..                  .....++.+++.  +++|.++....+
T Consensus       220 d~vi~~~g~~------------------~~~~~~~~l~~~--G~iv~~G~~~~~  253 (336)
T 4b7c_A          220 DVFFDNVGGE------------------ILDTVLTRIAFK--ARIVLCGAISQY  253 (336)
T ss_dssp             EEEEESSCHH------------------HHHHHHTTEEEE--EEEEECCCGGGG
T ss_pred             eEEEECCCcc------------------hHHHHHHHHhhC--CEEEEEeecccc
Confidence            9999999831                  122233444332  589988876543

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.97  E-value=6e-05  Score=66.70  Aligned_cols=115  Identities=17%  Similarity=0.211  Sum_probs=76.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCCC-CCceEEEEccCCCHHHHHHHhhcCCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPE-PGRLQFIYADLGDAKAVNKFFSENAF  146 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (296)
                      .++|.|+|+ |.+|..++..|+..|.  +|+++|++....+.....+....+. +..+.....|   .    +.+  .+.
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~----~a~--~~a   74 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y----EDC--KDA   74 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G----GGG--TTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H----HHh--CCC
Confidence            378999996 9999999999999987  8999987543333222223322111 1233333322   1    234  578


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcc
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS  196 (296)
                      |+||.+||....+  ..+..+.++.|....+.+.+.+.+.... .++.+|.
T Consensus        75 DvVvi~ag~p~kp--G~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN  123 (326)
T 3pqe_A           75 DIVCICAGANQKP--GETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATN  123 (326)
T ss_dssp             SEEEECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             CEEEEecccCCCC--CccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence            9999999974322  2345667899999999999999988754 4555554

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.97  E-value=1e-05  Score=71.87  Aligned_cols=76  Identities=18%  Similarity=0.147  Sum_probs=51.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH---HHHHHHhhcCCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAF  146 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~  146 (296)
                      +++|+|+||+|+||..+++.+...|++|+++++++.+.    +.++++   +.. ..  .|..+.   +.+.+.....++
T Consensus       149 g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~----~~~~~~---ga~-~~--~~~~~~~~~~~~~~~~~~~g~  218 (334)
T 3qwb_A          149 GDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKL----KIAKEY---GAE-YL--INASKEDILRQVLKFTNGKGV  218 (334)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHH----HHHHHT---TCS-EE--EETTTSCHHHHHHHHTTTSCE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHc---CCc-EE--EeCCCchHHHHHHHHhCCCCc
Confidence            38999999999999999999999999999998654322    223332   111 12  243333   344444433579


Q ss_pred             cEEEEcccc
Q 022471          147 DAVMHFAAV  155 (296)
Q Consensus       147 D~vi~~Ag~  155 (296)
                      |++|+|+|.
T Consensus       219 D~vid~~g~  227 (334)
T 3qwb_A          219 DASFDSVGK  227 (334)
T ss_dssp             EEEEECCGG
T ss_pred             eEEEECCCh
Confidence            999999984

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.97  E-value=1.1e-05  Score=72.08  Aligned_cols=75  Identities=15%  Similarity=0.156  Sum_probs=51.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHH---HHHHhhcCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKA---VNKFFSENAF  146 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---v~~~~~~~~~  146 (296)
                      ++|+||||+|+||..+++.+... |++|+++++++.+.    +.++++   +.. .  ..|..+.+.   +.++...+++
T Consensus       172 ~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~----~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~~~~~  241 (347)
T 1jvb_A          172 KTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAV----EAAKRA---GAD-Y--VINASMQDPLAEIRRITESKGV  241 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHH----HHHHHH---TCS-E--EEETTTSCHHHHHHHHTTTSCE
T ss_pred             CEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHH----HHHHHh---CCC-E--EecCCCccHHHHHHHHhcCCCc
Confidence            89999999999999999999999 99999998654332    222333   111 1  234544333   4444321479


Q ss_pred             cEEEEcccc
Q 022471          147 DAVMHFAAV  155 (296)
Q Consensus       147 D~vi~~Ag~  155 (296)
                      |++|+|+|.
T Consensus       242 d~vi~~~g~  250 (347)
T 1jvb_A          242 DAVIDLNNS  250 (347)
T ss_dssp             EEEEESCCC
T ss_pred             eEEEECCCC
Confidence            999999984

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=97.95  E-value=3.5e-06  Score=73.39  Aligned_cols=77  Identities=12%  Similarity=0.202  Sum_probs=50.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+++|||++ ++|+++++.|++.| +|++++|+..+.++..+.+......  .. .+.+|+.+.   .+.+  +++|+||
T Consensus       129 k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~--~~-~~~~d~~~~---~~~~--~~~DilV  198 (287)
T 1nvt_A          129 KNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNK--KF-GEEVKFSGL---DVDL--DGVDIII  198 (287)
T ss_dssp             CEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTC--CH-HHHEEEECT---TCCC--TTCCEEE
T ss_pred             CEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhccc--cc-ceeEEEeeH---HHhh--CCCCEEE
Confidence            899999986 99999999999999 9999987654433333333221000  00 112344442   2223  6799999


Q ss_pred             EcccccC
Q 022471          151 HFAAVAY  157 (296)
Q Consensus       151 ~~Ag~~~  157 (296)
                      ||+|...
T Consensus       199 n~ag~~~  205 (287)
T 1nvt_A          199 NATPIGM  205 (287)
T ss_dssp             ECSCTTC
T ss_pred             ECCCCCC
Confidence            9999754

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.94  E-value=1.1e-05  Score=71.29  Aligned_cols=76  Identities=14%  Similarity=0.026  Sum_probs=51.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH---HHHHHHhhcCCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAF  146 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~  146 (296)
                      +++|+|+||+|+||..+++.+...|++|+++++++.+.+    .++++   +.. ..  .|..+.   +.+.+.....++
T Consensus       141 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~----~~~~~---Ga~-~~--~~~~~~~~~~~~~~~~~~~g~  210 (325)
T 3jyn_A          141 GEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAA----HAKAL---GAW-ET--IDYSHEDVAKRVLELTDGKKC  210 (325)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH----HHHHH---TCS-EE--EETTTSCHHHHHHHHTTTCCE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHHc---CCC-EE--EeCCCccHHHHHHHHhCCCCc
Confidence            389999999999999999999999999999986543322    23333   111 22  344433   334444433579


Q ss_pred             cEEEEcccc
Q 022471          147 DAVMHFAAV  155 (296)
Q Consensus       147 D~vi~~Ag~  155 (296)
                      |++|+|+|.
T Consensus       211 Dvvid~~g~  219 (325)
T 3jyn_A          211 PVVYDGVGQ  219 (325)
T ss_dssp             EEEEESSCG
T ss_pred             eEEEECCCh
Confidence            999999984

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.93  E-value=2.5e-05  Score=69.60  Aligned_cols=77  Identities=22%  Similarity=0.119  Sum_probs=51.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH-HHHHHHhhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA-KAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~D~  148 (296)
                      +++|||+||+|+||..+++.+...|++|++++++..+.+    .++++.   .. ..+..+ .+. +.+.++....++|+
T Consensus       160 g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~----~~~~~g---a~-~v~~~~-~~~~~~v~~~~~~~g~Dv  230 (342)
T 4eye_A          160 GETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATE----FVKSVG---AD-IVLPLE-EGWAKAVREATGGAGVDM  230 (342)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHH----HHHHHT---CS-EEEESS-TTHHHHHHHHTTTSCEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH----HHHhcC---Cc-EEecCc-hhHHHHHHHHhCCCCceE
Confidence            389999999999999999999999999999987554432    233331   11 223333 222 33444433247999


Q ss_pred             EEEcccc
Q 022471          149 VMHFAAV  155 (296)
Q Consensus       149 vi~~Ag~  155 (296)
                      +|+|+|.
T Consensus       231 vid~~g~  237 (342)
T 4eye_A          231 VVDPIGG  237 (342)
T ss_dssp             EEESCC-
T ss_pred             EEECCch
Confidence            9999984

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.91  E-value=1.6e-05  Score=71.14  Aligned_cols=75  Identities=13%  Similarity=0.104  Sum_probs=51.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH---HHHHHHhhcCCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAF  146 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~  146 (296)
                      +++|+|+||+|+||..+++.+...|++|+++++++.+.+    .++++   +.. ..  .|..+.   +.+.++. ..++
T Consensus       168 g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~----~~~~l---Ga~-~~--~~~~~~~~~~~~~~~~-~~g~  236 (353)
T 4dup_A          168 GESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCE----ACERL---GAK-RG--INYRSEDFAAVIKAET-GQGV  236 (353)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH----HHHHH---TCS-EE--EETTTSCHHHHHHHHH-SSCE
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH----HHHhc---CCC-EE--EeCCchHHHHHHHHHh-CCCc
Confidence            389999999999999999999999999999987543332    22333   111 12  344333   3344443 3579


Q ss_pred             cEEEEcccc
Q 022471          147 DAVMHFAAV  155 (296)
Q Consensus       147 D~vi~~Ag~  155 (296)
                      |++|+|+|.
T Consensus       237 Dvvid~~g~  245 (353)
T 4dup_A          237 DIILDMIGA  245 (353)
T ss_dssp             EEEEESCCG
T ss_pred             eEEEECCCH
Confidence            999999983

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.91  E-value=3.6e-05  Score=59.39  Aligned_cols=73  Identities=14%  Similarity=0.198  Sum_probs=56.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      ++|+|.|+ |.+|..+++.|.+.|++|+++++++...+    .+.+     ..+.++.+|.++.+.++++-- .+.|+||
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~----~~~~-----~g~~~i~gd~~~~~~l~~a~i-~~ad~vi   76 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVD----ELRE-----RGVRAVLGNAANEEIMQLAHL-ECAKWLI   76 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHH----HHHH-----TTCEEEESCTTSHHHHHHTTG-GGCSEEE
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHH----HHHH-----cCCCEEECCCCCHHHHHhcCc-ccCCEEE
Confidence            57999996 99999999999999999999997543322    2222     356788999999998877522 4689999


Q ss_pred             Eccc
Q 022471          151 HFAA  154 (296)
Q Consensus       151 ~~Ag  154 (296)
                      -+.+
T Consensus        77 ~~~~   80 (140)
T 3fwz_A           77 LTIP   80 (140)
T ss_dssp             ECCS
T ss_pred             EECC
Confidence            7764

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.90  E-value=1.8e-05  Score=70.55  Aligned_cols=74  Identities=14%  Similarity=0.115  Sum_probs=50.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhh-hhCCCCCceEEEEccCCCH----HHHHHHhhcC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQ-ELFPEPGRLQFIYADLGDA----KAVNKFFSEN  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~----~~v~~~~~~~  144 (296)
                      +++|||+||+|+||..+++.+...|++|+++++++.+.    +.++ ++   +.. .  ..|.++.    +.+.++.. .
T Consensus       156 g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~----~~~~~~~---g~~-~--~~d~~~~~~~~~~~~~~~~-~  224 (345)
T 2j3h_A          156 GETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKV----DLLKTKF---GFD-D--AFNYKEESDLTAALKRCFP-N  224 (345)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH----HHHHHTS---CCS-E--EEETTSCSCSHHHHHHHCT-T
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHc---CCc-e--EEecCCHHHHHHHHHHHhC-C
Confidence            38999999999999999999999999999998654322    2222 22   111 1  2355543    33433332 4


Q ss_pred             CCcEEEEccc
Q 022471          145 AFDAVMHFAA  154 (296)
Q Consensus       145 ~~D~vi~~Ag  154 (296)
                      ++|++|+|+|
T Consensus       225 ~~d~vi~~~g  234 (345)
T 2j3h_A          225 GIDIYFENVG  234 (345)
T ss_dssp             CEEEEEESSC
T ss_pred             CCcEEEECCC
Confidence            7999999997

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.88  E-value=1.7e-05  Score=70.75  Aligned_cols=99  Identities=13%  Similarity=0.057  Sum_probs=63.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHH---HHHHHhhcCCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK---AVNKFFSENAF  146 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~v~~~~~~~~~  146 (296)
                      +++|+|+||+|+||..+++.+...|++|+++++++.+.+    .++++   +.. .  ..|.++.+   .+.++....++
T Consensus       167 g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~----~~~~~---ga~-~--~~d~~~~~~~~~~~~~~~~~~~  236 (343)
T 2eih_A          167 GDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLR----RAKAL---GAD-E--TVNYTHPDWPKEVRRLTGGKGA  236 (343)
T ss_dssp             TCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHH----HHHHH---TCS-E--EEETTSTTHHHHHHHHTTTTCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHhc---CCC-E--EEcCCcccHHHHHHHHhCCCCc
Confidence            389999999999999999999999999999987543322    22332   111 1  24665543   33333322479


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccc
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCA  198 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~  198 (296)
                      |++|+++| ...                 ....++.+++.  +++|.+++..
T Consensus       237 d~vi~~~g-~~~-----------------~~~~~~~l~~~--G~~v~~g~~~  268 (343)
T 2eih_A          237 DKVVDHTG-ALY-----------------FEGVIKATANG--GRIAIAGASS  268 (343)
T ss_dssp             EEEEESSC-SSS-----------------HHHHHHHEEEE--EEEEESSCCC
T ss_pred             eEEEECCC-HHH-----------------HHHHHHhhccC--CEEEEEecCC
Confidence            99999998 211                 12344555443  4899887743

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.87  E-value=3e-05  Score=68.63  Aligned_cols=115  Identities=16%  Similarity=0.192  Sum_probs=65.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      +++|.|+|+ |.+|+.++..|+..|.  +++++|++....+.....+....+....+.....|   .    +.+  .+.|
T Consensus         9 ~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~---~----~a~--~~aD   78 (326)
T 3vku_A            9 HQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE---Y----SDA--KDAD   78 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC---G----GGG--TTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc---H----HHh--cCCC
Confidence            378999996 9999999999999987  89999875433332222222221100123333322   2    233  5789


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcc
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS  196 (296)
                      +||.+||....+  -.+..+.++.|....+.+.+.+.+.... .++.+|.
T Consensus        79 iVvi~ag~~~kp--G~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtN  126 (326)
T 3vku_A           79 LVVITAGAPQKP--GETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN  126 (326)
T ss_dssp             EEEECCCCC------------------CHHHHHHHHHTTTCCSEEEECSS
T ss_pred             EEEECCCCCCCC--CchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccC
Confidence            999999975322  1234557888998899999999887654 4555543

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.83  E-value=3.2e-05  Score=67.96  Aligned_cols=83  Identities=12%  Similarity=0.103  Sum_probs=54.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +++++|+|+ ||+|++++..|++.|+ +|+++.|+..+.+++.+..+++... ........+..+.+.+.+.+  .+.|+
T Consensus       148 gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~-~~~~v~~~~~~~l~~~~~~l--~~~Di  223 (312)
T 3t4e_A          148 GKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNEN-TDCVVTVTDLADQHAFTEAL--ASADI  223 (312)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHH-SSCEEEEEETTCHHHHHHHH--HHCSE
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhc-cCcceEEechHhhhhhHhhc--cCceE
Confidence            389999997 9999999999999998 8999998733233333322222110 12233344666654445555  35799


Q ss_pred             EEEccccc
Q 022471          149 VMHFAAVA  156 (296)
Q Consensus       149 vi~~Ag~~  156 (296)
                      |||+....
T Consensus       224 IINaTp~G  231 (312)
T 3t4e_A          224 LTNGTKVG  231 (312)
T ss_dssp             EEECSSTT
T ss_pred             EEECCcCC
Confidence            99987654

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.82  E-value=4e-05  Score=70.79  Aligned_cols=35  Identities=23%  Similarity=0.106  Sum_probs=31.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      +++|+|+||+|+||..+++.+...|++|+++++++
T Consensus       221 g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~  255 (447)
T 4a0s_A          221 GDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSA  255 (447)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCH
Confidence            38999999999999999999999999999988543

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.76  E-value=0.00031  Score=61.97  Aligned_cols=168  Identities=14%  Similarity=0.125  Sum_probs=92.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      ++|.|+|+ |.+|..++..|+..|.  +|+++|.+..+.+.....+.........+.+..   .+    .+.+  .+.|+
T Consensus         8 ~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~---~~----~~a~--~~aDv   77 (318)
T 1y6j_A            8 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA---GD----YSDV--KDCDV   77 (318)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C----GGGG--TTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE---CC----HHHh--CCCCE
Confidence            68999998 9999999999999987  999999876554433333332211111222221   22    2234  57899


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccccc-ccCCCCCCCCCCCCCCCCChHHH-HHHH
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCAT-YGEPEKMPITEETPQAPINPYGK-AKKM  226 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~-~g~~~~~~~~e~~~~~~~~~Y~~-sK~~  226 (296)
                      ||.++|....+  ...-.+....|+...+.+.+.+.+....-+|.+.|.-+ .-..   ........++....|. +-+-
T Consensus        78 Vii~~g~p~k~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv~~~~~---~~~k~s~~p~~rviG~gt~Ld  152 (318)
T 1y6j_A           78 IVVTAGANRKP--GETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVDIITY---MIQKWSGLPVGKVIGSGTVLD  152 (318)
T ss_dssp             EEECCCC--------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSHHHHHH---HHHHHHTCCTTTEEECTTHHH
T ss_pred             EEEcCCCCCCC--CcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcHHHHHH---HHHHHcCCCHHHEeccCCchH
Confidence            99999975422  12345677889999999999998876543444444111 0000   0000001111122222 2223


Q ss_pred             HHHHHHHhhhcCCCcEEEEecCeeecCC
Q 022471          227 AEDIILDFSKNSDMAVMILRYFNVIGSD  254 (296)
Q Consensus       227 ~e~~~~~~~~~~gi~~~~lrpg~v~Gp~  254 (296)
                      ..++-..+++..|++...++. .|.|.+
T Consensus       153 ~~r~~~~la~~lgv~~~~v~~-~v~G~H  179 (318)
T 1y6j_A          153 SIRFRYLLSEKLGVDVKNVHG-YIIGEH  179 (318)
T ss_dssp             HHHHHHHHHTTTTCCTTTEEC-CEEBCS
T ss_pred             HHHHHHHHHHHhCCCHHHeEE-EEeccc
Confidence            344455555666776566665 788876

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.76  E-value=0.00043  Score=61.38  Aligned_cols=116  Identities=14%  Similarity=0.049  Sum_probs=74.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhh---CCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQEL---FPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (296)
                      ++|.|+|| |.+|..++..|+..|+ +|+++|+++...+.....+...   .....++.+.    +|.   ++.+  .+.
T Consensus        10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~d~---~ea~--~~a   79 (331)
T 1pzg_A           10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE----YSY---EAAL--TGA   79 (331)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE----CSH---HHHH--TTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEe----CCH---HHHh--CCC
Confidence            68999998 9999999999999998 9999998764443322222211   1111223221    233   3344  578


Q ss_pred             cEEEEcccccCcCCCCc---ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          147 DAVMHFAAVAYVGESTL---DPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~---~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      |+||-++|.......+.   ...+....|....+.+.+.+.+....-++.+.|
T Consensus        80 DiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  132 (331)
T 1pzg_A           80 DCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  132 (331)
T ss_dssp             SEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence            99999998654321110   334567788888888999988876544444444

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.75  E-value=0.00024  Score=62.39  Aligned_cols=113  Identities=13%  Similarity=0.078  Sum_probs=70.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhh---CCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQEL---FPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (296)
                      ++|.|+|| |.+|..++..|+..|+ +|+++|+++...+.....+...   .....++... .|   .    +.+  .+.
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d---~----~a~--~~a   71 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT-NN---Y----ADT--ANS   71 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE-SC---G----GGG--TTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC-CC---H----HHH--CCC
Confidence            68999998 9999999999999997 9888987654333222222211   0111222221 22   2    224  578


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      |+||.++|....+.  ....+....|....+.+.+.+.+.....+|.+.|
T Consensus        72 D~Vi~a~g~p~~~g--~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  119 (309)
T 1ur5_A           72 DVIVVTSGAPRKPG--MSREDLIKVNADITRACISQAAPLSPNAVIIMVN  119 (309)
T ss_dssp             SEEEECCCC----------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred             CEEEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC
Confidence            99999998754321  1223456788888889999998887665555555

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.74  E-value=0.00013  Score=61.21  Aligned_cols=70  Identities=17%  Similarity=0.162  Sum_probs=54.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHH-hhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF-FSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~-~~~~~~D~v  149 (296)
                      ++++|.|+ |.+|+.+++.|.+.|+ |+++++++...    +.+.      .++.++.+|.+|.+.++++ +  .+.|.|
T Consensus        10 ~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~----~~~~------~~~~~i~gd~~~~~~l~~a~i--~~ad~v   75 (234)
T 2aef_A           10 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRK----KVLR------SGANFVHGDPTRVSDLEKANV--RGARAV   75 (234)
T ss_dssp             CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHH----HHHH------TTCEEEESCTTCHHHHHHTTC--TTCSEE
T ss_pred             CEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHH----HHHh------cCCeEEEcCCCCHHHHHhcCc--chhcEE
Confidence            68999997 9999999999999999 99887643221    1211      2477899999999988876 4  578999


Q ss_pred             EEccc
Q 022471          150 MHFAA  154 (296)
Q Consensus       150 i~~Ag  154 (296)
                      |.+.+
T Consensus        76 i~~~~   80 (234)
T 2aef_A           76 IVDLE   80 (234)
T ss_dssp             EECCS
T ss_pred             EEcCC
Confidence            97753

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.73  E-value=1.1e-05  Score=66.69  Aligned_cols=35  Identities=26%  Similarity=0.376  Sum_probs=31.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~  105 (296)
                      |+|+|+||+|.+|+++++.|++.|++|++++|++.
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~   35 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREE   35 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHH
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            47999999999999999999999999999997643

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=97.73  E-value=1.3e-05  Score=75.75  Aligned_cols=71  Identities=15%  Similarity=0.246  Sum_probs=44.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+++|||| ||+|++++.+|++.|++|++++|+..+.+++.   +.. .  ..+.    ++.|   +.++ ....+|+||
T Consensus       365 k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la---~~~-~--~~~~----~~~d---l~~~-~~~~~DilV  429 (523)
T 2o7s_A          365 KTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELA---EAI-G--GKAL----SLTD---LDNY-HPEDGMVLA  429 (523)
T ss_dssp             -CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHH---HHT-T--C-CE----ETTT---TTTC---CCSEEEE
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH---HHc-C--Ccee----eHHH---hhhc-cccCceEEE
Confidence            78999999 69999999999999999999987643332222   222 1  1221    1222   1111 113589999


Q ss_pred             Eccccc
Q 022471          151 HFAAVA  156 (296)
Q Consensus       151 ~~Ag~~  156 (296)
                      ||+|+.
T Consensus       430 N~agvg  435 (523)
T 2o7s_A          430 NTTSMG  435 (523)
T ss_dssp             ECSSTT
T ss_pred             ECCCCC
Confidence            999974

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.72  E-value=0.00019  Score=63.52  Aligned_cols=116  Identities=15%  Similarity=0.116  Sum_probs=76.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      .++|.|+|+ |.+|..++..|+.+|.  +|+++|++....+.....+............+..  .|.+    .+  .+.|
T Consensus        19 ~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~----~~--~~aD   89 (331)
T 4aj2_A           19 QNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYS----VT--ANSK   89 (331)
T ss_dssp             SSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGG----GG--TTEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHH----Hh--CCCC
Confidence            378999997 9999999999999987  8999987543333322233322111111122222  1322    23  5789


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcc
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS  196 (296)
                      +||.+||....+  -.+-.+.++.|....+.+.+.+.+.... .++.+|.
T Consensus        90 iVvi~aG~~~kp--G~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN  137 (331)
T 4aj2_A           90 LVIITAGARQQE--GESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN  137 (331)
T ss_dssp             EEEECCSCCCCT--TCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             EEEEccCCCCCC--CccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            999999975432  2345678899999999999999988654 5555554

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.72  E-value=5.9e-05  Score=67.72  Aligned_cols=98  Identities=17%  Similarity=0.127  Sum_probs=62.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH---HHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~D  147 (296)
                      ++|+|+||+|+||..+++.+...|++|+++++++.+.    +.++++   +.. ..  .|..+.   +.+.+.. ..++|
T Consensus       165 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~----~~~~~~---Ga~-~~--~~~~~~~~~~~~~~~~-~~g~D  233 (362)
T 2c0c_A          165 KKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKS----AFLKSL---GCD-RP--INYKTEPVGTVLKQEY-PEGVD  233 (362)
T ss_dssp             CEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHH----HHHHHT---TCS-EE--EETTTSCHHHHHHHHC-TTCEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHH----HHHHHc---CCc-EE--EecCChhHHHHHHHhc-CCCCC
Confidence            8999999999999999999999999999998653222    223332   111 22  233332   2233322 24799


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccccc
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCAT  199 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~  199 (296)
                      ++|+|+|.           .       .....++.+++.  +++|.+++...
T Consensus       234 ~vid~~g~-----------~-------~~~~~~~~l~~~--G~iv~~g~~~~  265 (362)
T 2c0c_A          234 VVYESVGG-----------A-------MFDLAVDALATK--GRLIVIGFISG  265 (362)
T ss_dssp             EEEECSCT-----------H-------HHHHHHHHEEEE--EEEEECCCGGG
T ss_pred             EEEECCCH-----------H-------HHHHHHHHHhcC--CEEEEEeCCCC
Confidence            99999982           0       122345555443  58999887543

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.72  E-value=6.6e-05  Score=65.12  Aligned_cols=78  Identities=17%  Similarity=0.266  Sum_probs=53.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +++++|+|+ ||+|++++..|++.|+ +|++++|+..+.+++.+.+.....   .+.....+..+   +.+.+  .+.|+
T Consensus       127 ~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~---~~~i~~~~~~~---l~~~l--~~~Di  197 (283)
T 3jyo_A          127 LDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVG---REAVVGVDARG---IEDVI--AAADG  197 (283)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHT---SCCEEEECSTT---HHHHH--HHSSE
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcC---CceEEEcCHHH---HHHHH--hcCCE
Confidence            389999998 8999999999999998 799998876555555544443321   22333344433   44445  35799


Q ss_pred             EEEccccc
Q 022471          149 VMHFAAVA  156 (296)
Q Consensus       149 vi~~Ag~~  156 (296)
                      |||+....
T Consensus       198 VInaTp~G  205 (283)
T 3jyo_A          198 VVNATPMG  205 (283)
T ss_dssp             EEECSSTT
T ss_pred             EEECCCCC
Confidence            99987653

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.69  E-value=0.00033  Score=61.89  Aligned_cols=113  Identities=14%  Similarity=0.027  Sum_probs=74.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhC---CCCCceEEEEccCCCHHHHHHHhhcCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELF---PEPGRLQFIYADLGDAKAVNKFFSENAF  146 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (296)
                      ++|.|+|| |.+|..++..|+..|+ +|+++|+++...+.....+....   ..+.++.. ..|   .    +.+  .+.
T Consensus         8 ~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~d---~----~a~--~~a   76 (324)
T 3gvi_A            8 NKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-AND---Y----AAI--EGA   76 (324)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESS---G----GGG--TTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eCC---H----HHH--CCC
Confidence            78999998 9999999999999998 99999986654332222232211   11122221 122   2    234  578


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcc
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS  196 (296)
                      |+||.+||....+.  .+..+.+..|....+.+.+.+.+.... .++.+|.
T Consensus        77 DiVIiaag~p~k~G--~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN  125 (324)
T 3gvi_A           77 DVVIVTAGVPRKPG--MSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN  125 (324)
T ss_dssp             SEEEECCSCCCC-------CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             CEEEEccCcCCCCC--CCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence            99999999753321  234457888999999999999888754 5555554

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.64  E-value=0.00035  Score=60.70  Aligned_cols=81  Identities=17%  Similarity=0.228  Sum_probs=59.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCC------------------CCcchhhhhhhhhCCCCCceEEEEccC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS------------------RGNIGAVKVLQELFPEPGRLQFIYADL  131 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~Dl  131 (296)
                      ++|+|.|+ ||+|+++++.|+..|. +++++|.+.                  .+.+.+.+.+.++.+. .+++.+..++
T Consensus        37 ~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~-v~v~~~~~~l  114 (292)
T 3h8v_A           37 FAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPD-VLFEVHNYNI  114 (292)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTT-SEEEEECCCT
T ss_pred             CeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCC-cEEEEecccC
Confidence            79999995 9999999999999996 788888654                  2233344455555443 5677777888


Q ss_pred             CCHHHHHHHhhc---------CCCcEEEEcc
Q 022471          132 GDAKAVNKFFSE---------NAFDAVMHFA  153 (296)
Q Consensus       132 ~d~~~v~~~~~~---------~~~D~vi~~A  153 (296)
                      ++.+.++++++.         .++|+||.+.
T Consensus       115 ~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~  145 (292)
T 3h8v_A          115 TTVENFQHFMDRISNGGLEEGKPVDLVLSCV  145 (292)
T ss_dssp             TSHHHHHHHHHHHHHBSSSTTBCCSEEEECC
T ss_pred             CcHHHHHHHhhhhcccccccCCCCCEEEECC
Confidence            877777766531         3789999765

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.64  E-value=4.9e-05  Score=66.45  Aligned_cols=74  Identities=15%  Similarity=0.162  Sum_probs=50.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      ++|+|+|+ |++|++++..|++.|+ +|++++|+..+.+++.   ++.... ..      ++.+.+++.+.+  .+.|+|
T Consensus       142 ~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la---~~~~~~-~~------~~~~~~~~~~~~--~~aDiv  208 (297)
T 2egg_A          142 KRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLV---REGDER-RS------AYFSLAEAETRL--AEYDII  208 (297)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHH---HHSCSS-SC------CEECHHHHHHTG--GGCSEE
T ss_pred             CEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH---HHhhhc-cC------ceeeHHHHHhhh--ccCCEE
Confidence            89999997 8999999999999998 8999987543332222   222110 00      222335566666  468999


Q ss_pred             EEcccccC
Q 022471          150 MHFAAVAY  157 (296)
Q Consensus       150 i~~Ag~~~  157 (296)
                      ||+.+...
T Consensus       209 In~t~~~~  216 (297)
T 2egg_A          209 INTTSVGM  216 (297)
T ss_dssp             EECSCTTC
T ss_pred             EECCCCCC
Confidence            99998654

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.63  E-value=0.00026  Score=61.64  Aligned_cols=165  Identities=13%  Similarity=0.137  Sum_probs=96.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCC-CCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      |+|.|+|+ |.+|..++..|+..|+  +|+++|+++...+.....+..... .+........  +|    .+.+  .+.|
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d----~~a~--~~aD   71 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--AD----YSLL--KGSE   71 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SC----GGGG--TTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CC----HHHh--CCCC
Confidence            57999999 9999999999999998  899999765433211112221110 1112222211  12    2344  5789


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcccc---cccCCCCCCCCCCCCCCCCChHHH-
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSSTCA---TYGEPEKMPITEETPQAPINPYGK-  222 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS~~---~~g~~~~~~~~e~~~~~~~~~Y~~-  222 (296)
                      +||.+||....+  -.+..+.+..|....+.+.+.+.+.+.. .++.+|.-.   .|--      ......++....|. 
T Consensus        72 iVViaag~~~kp--G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNPvd~~t~~~------~k~~g~p~~rviG~g  143 (294)
T 1oju_A           72 IIVVTAGLARKP--GMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMDVMTYIM------WKESGKPRNEVFGMG  143 (294)
T ss_dssp             EEEECCCCCCCS--SCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSHHHHHHHH------HHHSCCCTTSEEECS
T ss_pred             EEEECCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcchHHHHHH------HHhcCCCHHHEeecc
Confidence            999999975432  2345677889999999999999988654 555555411   1100      00011222222233 


Q ss_pred             HHHHHHHHHHHhhhcCCCcEEEEecCeeecCCC
Q 022471          223 AKKMAEDIILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       223 sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                      +-+-..++-..++ +.|++...  -+.|+|.+.
T Consensus       144 t~LD~~R~~~~la-~l~v~~~~--~~~V~G~Hg  173 (294)
T 1oju_A          144 NQLDSQRLKERLY-NAGARNIR--RAWIIGEHG  173 (294)
T ss_dssp             HHHHHHHHHHHHH-HTTCBSCC--CCCEEBCSS
T ss_pred             cccHHHHHHHHHH-HhCCCccC--ceEEEecCC
Confidence            2333344445555 56776666  678888773

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.61  E-value=0.00085  Score=58.88  Aligned_cols=114  Identities=18%  Similarity=0.159  Sum_probs=74.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhC-C--CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEc-cCCCHHHHHHHhhcCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKD-S--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA-DLGDAKAVNKFFSENAF  146 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~-G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dl~d~~~v~~~~~~~~~  146 (296)
                      |||.|+||+|.+|..++..|+.+ +  .+++++|.++ ........+...   ......... .-.+.    +.+  .+.
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~---~~~~~v~~~~~~~~~----~~~--~~a   70 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHI---PTAVKIKGFSGEDAT----PAL--EGA   70 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTS---CSSEEEEEECSSCCH----HHH--TTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCC---CCCceEEEecCCCcH----HHh--CCC
Confidence            57999999999999999999875 5  4899998755 222222222221   122222111 11122    233  578


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcc
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS  196 (296)
                      |+||-.||....+  -.+..+.++.|....+.+.+.+.+...+ .++.+|-
T Consensus        71 Divii~ag~~rkp--G~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtN  119 (312)
T 3hhp_A           71 DVVLISAGVARKP--GMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN  119 (312)
T ss_dssp             SEEEECCSCSCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecC
Confidence            9999999975432  2356778999999999999999888654 5666654

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=97.59  E-value=1.9e-05  Score=68.22  Aligned_cols=33  Identities=15%  Similarity=0.325  Sum_probs=27.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHh-CCCeEEE-EecC
Q 022471           71 THVLVTGGAGYIGSHAALRLLK-DSYRVTI-VDNL  103 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~-~G~~V~~-~~r~  103 (296)
                      ++|.|+|++|.+|+.+++.+.+ .|++++. ++++
T Consensus         6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~   40 (273)
T 1dih_A            6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALERE   40 (273)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCT
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence            7899999999999999999885 5788874 4543

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.59  E-value=0.00056  Score=60.34  Aligned_cols=115  Identities=18%  Similarity=0.105  Sum_probs=75.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCC-CCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      ++|.|+|+ |.+|..++..|+..|. +|+++|+++...+.....+..... .+........  .|.    +.+  .+.|+
T Consensus         6 ~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~----~a~--~~aDv   76 (321)
T 3p7m_A            6 KKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDY----KDL--ENSDV   76 (321)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCG----GGG--TTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCH----HHH--CCCCE
Confidence            78999995 9999999999999988 999999866443322223322110 0011222211  122    234  57899


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcc
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS  196 (296)
                      ||.+||....+  -....+.+..|....+.+.+.+.+.... .++.+|-
T Consensus        77 VIi~ag~p~k~--G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN  123 (321)
T 3p7m_A           77 VIVTAGVPRKP--GMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITN  123 (321)
T ss_dssp             EEECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             EEEcCCcCCCC--CCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence            99999975432  2345667889999999999999988754 5555543

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.58  E-value=0.00037  Score=59.28  Aligned_cols=78  Identities=23%  Similarity=0.291  Sum_probs=51.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCC-------------------CCcchhhhhhhhhCCCCCceEEEEcc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS-------------------RGNIGAVKVLQELFPEPGRLQFIYAD  130 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~D  130 (296)
                      ++|+|.|+ ||+|+++++.|+..|. +++++|...                   .+.+.+.+.+.++.+. .++..+..+
T Consensus        29 ~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~-~~v~~~~~~  106 (251)
T 1zud_1           29 SQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPD-IQLTALQQR  106 (251)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTT-SEEEEECSC
T ss_pred             CcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCC-CEEEEEecc
Confidence            79999997 8899999999999997 788887542                   1112223333333322 345555555


Q ss_pred             CCCHHHHHHHhhcCCCcEEEEcc
Q 022471          131 LGDAKAVNKFFSENAFDAVMHFA  153 (296)
Q Consensus       131 l~d~~~v~~~~~~~~~D~vi~~A  153 (296)
                      ++ .+.+.+++  .++|+||++.
T Consensus       107 ~~-~~~~~~~~--~~~DvVi~~~  126 (251)
T 1zud_1          107 LT-GEALKDAV--ARADVVLDCT  126 (251)
T ss_dssp             CC-HHHHHHHH--HHCSEEEECC
T ss_pred             CC-HHHHHHHH--hcCCEEEECC
Confidence            54 35667777  3589999875

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.57  E-value=0.00013  Score=65.60  Aligned_cols=75  Identities=17%  Similarity=0.166  Sum_probs=52.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      ++|+|+|+ |++|+.+++.+...|++|++++|++.+.+.+.+..    .  ..+.   .+..+.+++.+.+  .+.|+||
T Consensus       168 ~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~----~--~~~~---~~~~~~~~~~~~~--~~~DvVI  235 (361)
T 1pjc_A          168 GKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLF----G--SRVE---LLYSNSAEIETAV--AEADLLI  235 (361)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----G--GGSE---EEECCHHHHHHHH--HTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhh----C--ceeE---eeeCCHHHHHHHH--cCCCEEE
Confidence            89999999 99999999999999999999997654333222211    1  1121   1223456666666  4689999


Q ss_pred             EcccccC
Q 022471          151 HFAAVAY  157 (296)
Q Consensus       151 ~~Ag~~~  157 (296)
                      ++++...
T Consensus       236 ~~~~~~~  242 (361)
T 1pjc_A          236 GAVLVPG  242 (361)
T ss_dssp             ECCCCTT
T ss_pred             ECCCcCC
Confidence            9998643

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.56  E-value=0.00011  Score=65.43  Aligned_cols=73  Identities=15%  Similarity=0.115  Sum_probs=49.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC--HHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD--AKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~D~  148 (296)
                      ++|+|+||+|+||...++.+...|++|+++++++.+    .+.++++.   .. ..  .|..+  .+.+.++ ...++|+
T Consensus       152 ~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~----~~~~~~lG---a~-~v--i~~~~~~~~~~~~~-~~~g~Dv  220 (346)
T 3fbg_A          152 KTLLIINGAGGVGSIATQIAKAYGLRVITTASRNET----IEWTKKMG---AD-IV--LNHKESLLNQFKTQ-GIELVDY  220 (346)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHH----HHHHHHHT---CS-EE--ECTTSCHHHHHHHH-TCCCEEE
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHhcC---Cc-EE--EECCccHHHHHHHh-CCCCccE
Confidence            899999999999999999999999999999864432    22333331   11 12  22222  2334443 3357999


Q ss_pred             EEEccc
Q 022471          149 VMHFAA  154 (296)
Q Consensus       149 vi~~Ag  154 (296)
                      +|+|+|
T Consensus       221 v~d~~g  226 (346)
T 3fbg_A          221 VFCTFN  226 (346)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999987

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.55  E-value=0.00035  Score=61.18  Aligned_cols=113  Identities=18%  Similarity=0.177  Sum_probs=65.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      |+|.|+|| |.+|..++..|+..|+  +|+++|++....+.....+..............   .+.    +.+  .+.|+
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~----~a~--~~aDv   70 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGH----SEL--ADAQV   70 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECG----GGG--TTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCH----HHh--CCCCE
Confidence            47999998 9999999999999999  999999754322211111111110001222222   122    234  57899


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEc
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSS  195 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~S  195 (296)
                      ||.+++....+.  ..-.+....|....+.+++.+.+.... .+|.+|
T Consensus        71 VIi~~~~~~~~g--~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~t  116 (304)
T 2v6b_A           71 VILTAGANQKPG--ESRLDLLEKNADIFRELVPQITRAAPDAVLLVTS  116 (304)
T ss_dssp             EEECC--------------CHHHHHHHHHHHHHHHHHHCSSSEEEECS
T ss_pred             EEEcCCCCCCCC--CcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            999998643221  122345678888888888888876544 444444

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.53  E-value=0.00016  Score=63.01  Aligned_cols=72  Identities=19%  Similarity=0.167  Sum_probs=50.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      ++|+|+||+|++|..+++.+...|++|+++++++.+.+.+    +++   +.. .  ..|..+.+++.+.+  .++|++|
T Consensus       127 ~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~~~---ga~-~--~~~~~~~~~~~~~~--~~~d~vi  194 (302)
T 1iz0_A          127 EKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP----LAL---GAE-E--AATYAEVPERAKAW--GGLDLVL  194 (302)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH----HHT---TCS-E--EEEGGGHHHHHHHT--TSEEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----Hhc---CCC-E--EEECCcchhHHHHh--cCceEEE
Confidence            7999999999999999999999999999999765443322    222   111 1  23555413343334  5799999


Q ss_pred             Ecccc
Q 022471          151 HFAAV  155 (296)
Q Consensus       151 ~~Ag~  155 (296)
                      + +|.
T Consensus       195 d-~g~  198 (302)
T 1iz0_A          195 E-VRG  198 (302)
T ss_dssp             E-CSC
T ss_pred             E-CCH
Confidence            9 873

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.53  E-value=0.00014  Score=62.60  Aligned_cols=73  Identities=18%  Similarity=0.285  Sum_probs=48.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+|+|+|+ |++|++++..|++.|++|++++|+..+.+++.+.+...    ..+.  ..|+   ++   +.+ ++.|+||
T Consensus       120 ~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~----~~~~--~~~~---~~---~~~-~~~DivI  185 (272)
T 1p77_A          120 QHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY----GNIQ--AVSM---DS---IPL-QTYDLVI  185 (272)
T ss_dssp             CEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG----SCEE--EEEG---GG---CCC-SCCSEEE
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcccc----CCeE--EeeH---HH---hcc-CCCCEEE
Confidence            89999998 89999999999999999999998654444333332211    1222  2233   11   111 3789999


Q ss_pred             EcccccC
Q 022471          151 HFAAVAY  157 (296)
Q Consensus       151 ~~Ag~~~  157 (296)
                      |+++...
T Consensus       186 n~t~~~~  192 (272)
T 1p77_A          186 NATSAGL  192 (272)
T ss_dssp             ECCCC--
T ss_pred             ECCCCCC
Confidence            9998654

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.52  E-value=0.00026  Score=63.76  Aligned_cols=75  Identities=19%  Similarity=0.222  Sum_probs=49.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +++|+|+||+|+||..+++.+...|++|+++++ +.+    .+.++++   +.. .  ..|..+.+..+++.+..++|++
T Consensus       184 g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~----~~~~~~l---Ga~-~--v~~~~~~~~~~~~~~~~g~D~v  252 (375)
T 2vn8_A          184 GKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDA----SELVRKL---GAD-D--VIDYKSGSVEEQLKSLKPFDFI  252 (375)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGG----HHHHHHT---TCS-E--EEETTSSCHHHHHHTSCCBSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHH----HHHHHHc---CCC-E--EEECCchHHHHHHhhcCCCCEE
Confidence            389999999999999999999899999988873 222    2233333   111 1  1344443333333333579999


Q ss_pred             EEcccc
Q 022471          150 MHFAAV  155 (296)
Q Consensus       150 i~~Ag~  155 (296)
                      |+++|.
T Consensus       253 id~~g~  258 (375)
T 2vn8_A          253 LDNVGG  258 (375)
T ss_dssp             EESSCT
T ss_pred             EECCCC
Confidence            999984

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.52  E-value=0.00096  Score=58.65  Aligned_cols=113  Identities=17%  Similarity=0.140  Sum_probs=74.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCC--CCcchhhhhhhhh---CCCCCceEEEEccCCCHHHHHHHhhcC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS--RGNIGAVKVLQEL---FPEPGRLQFIYADLGDAKAVNKFFSEN  144 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~--~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~v~~~~~~~  144 (296)
                      ++|.|+|+ |.+|..++..|+..|+ +|+++|+++  ...+.....+...   .....++.. ..|   .    +.+  .
T Consensus         9 ~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~-t~d---~----~a~--~   77 (315)
T 3tl2_A            9 KKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG-TSD---Y----ADT--A   77 (315)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE-ESC---G----GGG--T
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE-cCC---H----HHh--C
Confidence            78999997 9999999999999999 999999752  1111111111111   011122221 112   2    233  5


Q ss_pred             CCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcc
Q 022471          145 AFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS  196 (296)
                      +.|+||.+||....+  -.+..+.+..|....+.+.+.+.+.... .++.+|.
T Consensus        78 ~aDvVIiaag~p~kp--g~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN  128 (315)
T 3tl2_A           78 DSDVVVITAGIARKP--GMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTN  128 (315)
T ss_dssp             TCSEEEECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             CCCEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence            799999999975432  2345678899999999999999888654 5555553

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.52  E-value=0.00016  Score=64.30  Aligned_cols=73  Identities=21%  Similarity=0.231  Sum_probs=48.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC-HHHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~D~v  149 (296)
                      ++|||+||+|+||..+++.+...|++|+++ +++.+    .+.++++   +  ...+. +-.+ .+.+.+.....++|++
T Consensus       152 ~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~----~~~~~~l---G--a~~i~-~~~~~~~~~~~~~~~~g~D~v  220 (343)
T 3gaz_A          152 QTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSD----LEYVRDL---G--ATPID-ASREPEDYAAEHTAGQGFDLV  220 (343)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHH----HHHHHHH---T--SEEEE-TTSCHHHHHHHHHTTSCEEEE
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHH----HHHHHHc---C--CCEec-cCCCHHHHHHHHhcCCCceEE
Confidence            899999999999999999999999999888 43322    2233333   1  22222 2222 2334444433579999


Q ss_pred             EEccc
Q 022471          150 MHFAA  154 (296)
Q Consensus       150 i~~Ag  154 (296)
                      |+++|
T Consensus       221 id~~g  225 (343)
T 3gaz_A          221 YDTLG  225 (343)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99998

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.49  E-value=0.00098  Score=58.85  Aligned_cols=114  Identities=14%  Similarity=0.108  Sum_probs=74.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhC--CCCCceEEEEccCCCHHHHHHHhhcCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELF--PEPGRLQFIYADLGDAKAVNKFFSENA  145 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~v~~~~~~~~  145 (296)
                      .++|.|+|+ |.+|..++..|+..|.  +|+++|++....+.....+....  ....++. ...|..+       +  .+
T Consensus        21 ~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~-~t~d~~~-------~--~d   89 (330)
T 3ldh_A           21 YNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIV-SGKDYSV-------S--AG   89 (330)
T ss_dssp             CCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEE-EESSSCS-------C--SS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEE-EcCCHHH-------h--CC
Confidence            378999998 9999999999999987  89999875433332222222221  1111221 1234322       2  57


Q ss_pred             CcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcc
Q 022471          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS  196 (296)
                      .|+||-+||....+  -.+..+.+..|....+.+.+.+.+.+.. .++.+|.
T Consensus        90 aDiVIitaG~p~kp--G~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN  139 (330)
T 3ldh_A           90 SKLVVITAGARQQE--GESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPE  139 (330)
T ss_dssp             CSEEEECCSCCCCS--SCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             CCEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCC
Confidence            89999999975432  2234467788888888899999887654 4555553

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.48  E-value=0.0004  Score=63.50  Aligned_cols=72  Identities=14%  Similarity=0.231  Sum_probs=56.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHH-hhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF-FSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~-~~~~~~D~v  149 (296)
                      ++|+|.|. |-+|..+++.|.+.|+.|+++++++...    +.+++     ..+.++.+|.++.+.++++ +  .+.|+|
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v----~~~~~-----~g~~vi~GDat~~~~L~~agi--~~A~~v   72 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHI----ETLRK-----FGMKVFYGDATRMDLLESAGA--AKAEVL   72 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHH----HHHHH-----TTCCCEESCTTCHHHHHHTTT--TTCSEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHH----HHHHh-----CCCeEEEcCCCCHHHHHhcCC--CccCEE
Confidence            67999996 9999999999999999999999754332    22222     2466789999999998887 4  578999


Q ss_pred             EEccc
Q 022471          150 MHFAA  154 (296)
Q Consensus       150 i~~Ag  154 (296)
                      |-+.+
T Consensus        73 iv~~~   77 (413)
T 3l9w_A           73 INAID   77 (413)
T ss_dssp             EECCS
T ss_pred             EECCC
Confidence            87654

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.48  E-value=0.00031  Score=61.73  Aligned_cols=115  Identities=17%  Similarity=0.082  Sum_probs=72.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhC-CCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      |+|.|+|+ |.+|..++..|+..|.  +|+++|+++...+.....+.... ...........|  +.    +.+  .+.|
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~----~a~--~~aD   71 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--DY----GPT--EDSD   71 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--SS----GGG--TTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--CH----HHh--CCCC
Confidence            57999996 9999999999999887  89999986644332222222211 001122222112  11    233  5789


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcc
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS  196 (296)
                      +||.+||....+  ..+..+.++.|....+.+.+.+.+.... .++.+|.
T Consensus        72 vVii~ag~~~kp--G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN  119 (314)
T 3nep_X           72 VCIITAGLPRSP--GMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN  119 (314)
T ss_dssp             EEEECCCC---------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred             EEEECCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence            999999975432  1244567889999999999999988654 4555554

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.48  E-value=2.8e-05  Score=60.27  Aligned_cols=70  Identities=14%  Similarity=0.294  Sum_probs=47.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      ++|+|.|+ |++|+.+++.|.+.|++|++++|+..+.++..   ++.   +  ....  +..+   +.+++  .+.|+||
T Consensus        22 ~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a---~~~---~--~~~~--~~~~---~~~~~--~~~Divi   85 (144)
T 3oj0_A           22 NKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFA---EKY---E--YEYV--LIND---IDSLI--KNNDVII   85 (144)
T ss_dssp             CEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHH---HHH---T--CEEE--ECSC---HHHHH--HTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHH---HHh---C--CceE--eecC---HHHHh--cCCCEEE
Confidence            89999996 99999999999999999888887644332222   222   1  1211  2233   34445  3689999


Q ss_pred             Eccccc
Q 022471          151 HFAAVA  156 (296)
Q Consensus       151 ~~Ag~~  156 (296)
                      .+.+..
T Consensus        86 ~at~~~   91 (144)
T 3oj0_A           86 TATSSK   91 (144)
T ss_dssp             ECSCCS
T ss_pred             EeCCCC
Confidence            998754

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.46  E-value=0.00063  Score=59.93  Aligned_cols=114  Identities=15%  Similarity=0.171  Sum_probs=70.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      ++|.|+|| |.+|..++..|+..+.  +++++|++..+.+.....+....+....+.+.. |  +    .+.+  .+.|+
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~----~~a~--~~aDv   75 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--E----YSDC--KDADL   75 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--C----GGGG--TTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--C----HHHh--CCCCE
Confidence            68999998 9999999999999876  899999754333322222222211112333332 2  2    2234  57899


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcc
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS  196 (296)
                      ||..||....+.  ..-.+....|+...+.+.+.+.+.... .+|.+|-
T Consensus        76 Vii~ag~~~~~g--~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  122 (318)
T 1ez4_A           76 VVITAGAPQKPG--ESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAAN  122 (318)
T ss_dssp             EEECCCC------------CHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             EEECCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            999999754321  123346788999999999999888644 5555543

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.46  E-value=0.00024  Score=62.18  Aligned_cols=34  Identities=32%  Similarity=0.438  Sum_probs=28.9

Q ss_pred             cE-EEEEcCC------------------ChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           71 TH-VLVTGGA------------------GYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        71 k~-vlVTGas------------------G~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      ++ ||||+|.                  |-.|.++|++++++|++|+++.+..
T Consensus        37 k~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~   89 (313)
T 1p9o_A           37 RRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR   89 (313)
T ss_dssp             CCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             CeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence            55 9998765                  5699999999999999999998743

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=97.42  E-value=0.0016  Score=58.46  Aligned_cols=171  Identities=11%  Similarity=0.039  Sum_probs=94.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC--e---EEEEecCCCCcch-hhhhhhhhCCCC-CceEEEEccCCCHHHHHHHhh
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY--R---VTIVDNLSRGNIG-AVKVLQELFPEP-GRLQFIYADLGDAKAVNKFFS  142 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~--~---V~~~~r~~~~~~~-~~~~~~~~~~~~-~~~~~~~~Dl~d~~~v~~~~~  142 (296)
                      ..+|.||||+|.||++++-.|+..+.  +   +++.+.+....++ +.-...++.... .-..-+  .+.+ ++ .+.+ 
T Consensus        32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v--~i~~-~~-y~~~-  106 (375)
T 7mdh_A           32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREV--SIGI-DP-YEVF-  106 (375)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEE--EEES-CH-HHHT-
T ss_pred             CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCc--EEec-CC-HHHh-
Confidence            37899999999999999999998764  2   6665543333211 121222221111 111111  1121 12 2333 


Q ss_pred             cCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHc-CC-CEEEEEccc---cccc--CCCCCCCCCCCCCC
Q 022471          143 ENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GV-DTLIYSSTC---ATYG--EPEKMPITEETPQA  215 (296)
Q Consensus       143 ~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-~~-~riV~~SS~---~~~g--~~~~~~~~e~~~~~  215 (296)
                       .+.|+||-.||....+  -.+-.+.++.|....+.+.+.+.+. +. ..++.+|.-   ..|-  ...+       .++
T Consensus       107 -~daDvVVitag~prkp--G~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPvD~~t~ia~k~sg-------~~~  176 (375)
T 7mdh_A          107 -EDVDWALLIGAKPRGP--GMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCNTNALICLKNAP-------DIP  176 (375)
T ss_dssp             -TTCSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCT-------TSC
T ss_pred             -CCCCEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchhHHHHHHHHHcC-------CCC
Confidence             5789999999975422  2356678999999999999999885 43 456666641   1110  0000       011


Q ss_pred             CCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                      +...-+.+-+-..++-..+++..|+....++-..|+|.+.
T Consensus       177 ~rvig~gT~LDsaR~r~~lA~~lgv~~~~V~~v~V~GeHg  216 (375)
T 7mdh_A          177 AKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHS  216 (375)
T ss_dssp             GGGEEECCHHHHHHHHHHHHHHTTSCGGGEECCEEEBCSS
T ss_pred             ccEEEeeehHHHHHHHHHHHHHhCcChhhcccceEEecCC
Confidence            1111122233334444555566777666666447888764

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=97.42  E-value=0.001  Score=58.34  Aligned_cols=114  Identities=17%  Similarity=0.085  Sum_probs=73.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +||.|+|| |.+|..++..|+..+  .+++++|++..+.+.....+....+....+.+.. |  +.    +.+  .+.|+
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~----~a~--~~aD~   70 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SY----GDL--EGARA   70 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CG----GGG--TTEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CH----HHh--CCCCE
Confidence            57999998 999999999999987  5899999754333322222222111012233332 2  22    234  57899


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcc
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS  196 (296)
                      ||..||....+  -..-.+....|....+.+.+.+.+.+.. .++.+|-
T Consensus        71 Vii~ag~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  117 (310)
T 2xxj_A           71 VVLAAGVAQRP--GETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATN  117 (310)
T ss_dssp             EEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             EEECCCCCCCC--CcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence            99999975432  1234567888999999999999888644 5555543

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.42  E-value=0.0022  Score=56.94  Aligned_cols=169  Identities=13%  Similarity=0.112  Sum_probs=95.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-------eEEEEecCCCCc--chhhhhhhhhCCCCCceEEEEccCCCHHHHHHHh
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRGN--IGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFF  141 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-------~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~  141 (296)
                      -||.|+||+|+||+.++..|+....       ++.++|..+...  +.....+... ..+........  +|   ..+.+
T Consensus        25 vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~-~~~~~~~~~~~--~~---~~~a~   98 (345)
T 4h7p_A           25 VKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDC-AFPLLDKVVVT--AD---PRVAF   98 (345)
T ss_dssp             EEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHT-TCTTEEEEEEE--SC---HHHHT
T ss_pred             CEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhc-CccCCCcEEEc--CC---hHHHh
Confidence            5899999999999999998887643       688887532111  1112222222 11112222221  12   23445


Q ss_pred             hcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcC-CC-EEEEEccc---ccc--cCCCCCCCCCCCCC
Q 022471          142 SENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VD-TLIYSSTC---ATY--GEPEKMPITEETPQ  214 (296)
Q Consensus       142 ~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~~-riV~~SS~---~~~--g~~~~~~~~e~~~~  214 (296)
                        .+.|+||-.||....+  -.+-.+.++.|....+.+.+.+.+.. .. +++.+|.-   .+|  -....      ..+
T Consensus        99 --~~advVvi~aG~prkp--GmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPvd~~~~i~~~~~~------g~~  168 (345)
T 4h7p_A           99 --DGVAIAIMCGAFPRKA--GMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPANTNALILLKSAQ------GKL  168 (345)
T ss_dssp             --TTCSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHHTT------TCS
T ss_pred             --CCCCEEEECCCCCCCC--CCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCcchHHHHHHHHcc------CCC
Confidence              5799999999976432  23567789999999999999998864 23 55555541   111  00000      001


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                      ++...-+.+-+-..++-..++++.|+....++-..|+|.+.
T Consensus       169 ~~r~i~~~t~LDs~R~~~~la~~~~v~~~~V~~~~V~G~HG  209 (345)
T 4h7p_A          169 NPRHVTAMTRLDHNRALSLLARKAGVPVSQVRNVIIWGNHS  209 (345)
T ss_dssp             CGGGEEECCHHHHHHHHHHHHHHHTSCGGGEECCEEEBCSS
T ss_pred             CcceeeeccchhHHHHHHHHHHHHCcChhheecceeecCCC
Confidence            11222222333333444455555677666666666777663

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.41  E-value=0.0013  Score=57.98  Aligned_cols=113  Identities=19%  Similarity=0.192  Sum_probs=72.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCCC-CCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPE-PGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      ++|.|+|| |.+|..++..|+..|.  +|+++|+++.+.+.....+....+. +..+.+.. |  +    .+.+  .+.|
T Consensus         7 ~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~----~~a~--~~aD   76 (317)
T 3d0o_A            7 NKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--E----YSDC--HDAD   76 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--C----GGGG--TTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--C----HHHh--CCCC
Confidence            68999998 9999999999999884  8999987543222211222221111 12233332 2  2    2334  5789


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEc
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSS  195 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~S  195 (296)
                      +||..||.....  ...-.+....|....+.+.+.+.+.... .+|.+|
T Consensus        77 vVvi~ag~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (317)
T 3d0o_A           77 LVVICAGAAQKP--GETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT  123 (317)
T ss_dssp             EEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEECCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence            999999875432  2334567788999999999999888654 444443

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.41  E-value=0.00037  Score=62.58  Aligned_cols=96  Identities=15%  Similarity=0.176  Sum_probs=63.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      ++|+|+|+ |+||..+++.+...|++|+++++++.+.+.+.   +++   +.. .  ..|..+.+.+.++.  +++|+||
T Consensus       189 ~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~---~~l---Ga~-~--v~~~~~~~~~~~~~--~~~D~vi  256 (366)
T 1yqd_A          189 KHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEAL---KNF---GAD-S--FLVSRDQEQMQAAA--GTLDGII  256 (366)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHH---HTS---CCS-E--EEETTCHHHHHHTT--TCEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---Hhc---CCc-e--EEeccCHHHHHHhh--CCCCEEE
Confidence            79999996 99999999999999999999987543332211   122   111 1  24666776776665  5799999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccc
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTC  197 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~  197 (296)
                      +++|....                 ....++.+++.  +++|.+++.
T Consensus       257 d~~g~~~~-----------------~~~~~~~l~~~--G~iv~~g~~  284 (366)
T 1yqd_A          257 DTVSAVHP-----------------LLPLFGLLKSH--GKLILVGAP  284 (366)
T ss_dssp             ECCSSCCC-----------------SHHHHHHEEEE--EEEEECCCC
T ss_pred             ECCCcHHH-----------------HHHHHHHHhcC--CEEEEEccC
Confidence            99984311                 11244445433  589988764

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.40  E-value=0.00094  Score=59.02  Aligned_cols=114  Identities=15%  Similarity=0.182  Sum_probs=72.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      ++|.|+|| |.+|..++..|+..+.  +++++|++..+.+.....+....+....+.+.. |  +.    +.+  .+.|+
T Consensus        10 ~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~~----~a~--~~aDv   79 (326)
T 2zqz_A           10 QKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--EY----SDA--KDADL   79 (326)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CG----GGG--GGCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--CH----HHh--CCCCE
Confidence            78999998 9999999999998876  899998754333222222222111112333332 2  22    224  46899


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcc
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS  196 (296)
                      ||..||....+  -..-.+....|+...+.+.+.+.+.... .+|.+|-
T Consensus        80 Vii~ag~~~k~--g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  126 (326)
T 2zqz_A           80 VVITAGAPQKP--GETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN  126 (326)
T ss_dssp             EEECCCCC-------CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred             EEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            99999975432  1234567788999999999999887643 5555543

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.39  E-value=0.0013  Score=57.22  Aligned_cols=115  Identities=15%  Similarity=0.149  Sum_probs=73.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhC-CCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      |||.|+|| |+||+.++..|+.++.  +++++|.++...+.....+.... ..+........  .|.+    .+  .+.|
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~--~d~~----~~--~~aD   71 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS----LL--KGSE   71 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEE--SCGG----GG--TTCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecC--CCHH----Hh--CCCC
Confidence            57899995 9999999999998874  79999865422222222222210 01112222221  1222    23  5789


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      +||-.||....+  -.+..+.++.|....+.+.+.+.+...+-++.+-|
T Consensus        72 vVvitAG~prkp--GmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvs  118 (294)
T 2x0j_A           72 IIVVTAGLARKP--GMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             EEEECCCCCCCS--SSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             EEEEecCCCCCC--CCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence            999999976533  23567789999999999999999987654444433

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.39  E-value=0.00031  Score=65.07  Aligned_cols=35  Identities=26%  Similarity=0.197  Sum_probs=31.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      +.+|+|+||+|+||...++.+...|++|+++++++
T Consensus       229 g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~  263 (456)
T 3krt_A          229 GDNVLIWGASGGLGSYATQFALAGGANPICVVSSP  263 (456)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCH
Confidence            38999999999999999999999999999988543

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.38  E-value=0.00022  Score=64.44  Aligned_cols=102  Identities=20%  Similarity=0.109  Sum_probs=65.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +++|+|+|+ |.||..+++.+...|++|++++++..+.+.    +++...  ..+   ..|..+.+++.+++  .+.|+|
T Consensus       168 g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~----~~~~~g--~~~---~~~~~~~~~l~~~l--~~aDvV  235 (377)
T 2vhw_A          168 PADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQ----LDAEFC--GRI---HTRYSSAYELEGAV--KRADLV  235 (377)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH----HHHHTT--TSS---EEEECCHHHHHHHH--HHCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHH----HHHhcC--Cee---EeccCCHHHHHHHH--cCCCEE
Confidence            489999998 999999999999999999999975433222    222111  222   23445566777777  368999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      |++++.... .....          .+...++.|++  .+.||.+|+
T Consensus       236 i~~~~~p~~-~t~~l----------i~~~~l~~mk~--g~~iV~va~  269 (377)
T 2vhw_A          236 IGAVLVPGA-KAPKL----------VSNSLVAHMKP--GAVLVDIAI  269 (377)
T ss_dssp             EECCCCTTS-CCCCC----------BCHHHHTTSCT--TCEEEEGGG
T ss_pred             EECCCcCCC-CCcce----------ecHHHHhcCCC--CcEEEEEec
Confidence            999875432 11000          02234455543  358999985

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.37  E-value=0.0015  Score=57.49  Aligned_cols=115  Identities=17%  Similarity=0.203  Sum_probs=71.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCCC-CCceEEEEccCCCHHHHHHHhhcCCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPE-PGRLQFIYADLGDAKAVNKFFSENAF  146 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (296)
                      +++|.|+|+ |.+|..++..|+..|.  +|+++|++....+.....+...... +..+.+.. |  +.    +.+  .+.
T Consensus         6 ~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~~----~al--~~a   75 (316)
T 1ldn_A            6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--DY----DDC--RDA   75 (316)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--CG----GGT--TTC
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--cH----HHh--CCC
Confidence            378999998 9999999999998874  8999997643222212222222111 11333332 1  22    234  578


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      |+||.++++......  ...+.+..|....+.+.+.+.+....-++++-|
T Consensus        76 DvViia~~~~~~~g~--~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~t  123 (316)
T 1ldn_A           76 DLVVICAGANQKPGE--TRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (316)
T ss_dssp             SEEEECCSCCCCTTT--CSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             CEEEEcCCCCCCCCC--CHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeC
Confidence            999999997654322  224557788888888898888876543333334

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.36  E-value=0.00031  Score=61.96  Aligned_cols=73  Identities=23%  Similarity=0.265  Sum_probs=46.8

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH--HHHHHHhhcCCCcEE
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA--KAVNKFFSENAFDAV  149 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~--~~v~~~~~~~~~D~v  149 (296)
                      +|+|+||+|++|...++.+...|++|+++++++.+.+.    ++++   +.. ..  .|..+.  +.++++ ...++|++
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~----~~~l---Ga~-~~--i~~~~~~~~~~~~~-~~~~~d~v  220 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDY----LRVL---GAK-EV--LAREDVMAERIRPL-DKQRWAAA  220 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHH----HHHT---TCS-EE--EECC---------C-CSCCEEEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH----HHHc---CCc-EE--EecCCcHHHHHHHh-cCCcccEE
Confidence            79999999999999999998999999999876544332    2222   111 11  244332  122222 22479999


Q ss_pred             EEcccc
Q 022471          150 MHFAAV  155 (296)
Q Consensus       150 i~~Ag~  155 (296)
                      |+++|.
T Consensus       221 id~~g~  226 (328)
T 1xa0_A          221 VDPVGG  226 (328)
T ss_dssp             EECSTT
T ss_pred             EECCcH
Confidence            999983

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.33  E-value=0.00035  Score=62.72  Aligned_cols=74  Identities=18%  Similarity=0.241  Sum_probs=50.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC--HHHHHHHhhcCCCc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD--AKAVNKFFSENAFD  147 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~D  147 (296)
                      +++|+|+|| |+||..+++.+...|++|++++++... .+..+.++++     ....+  | .+  .+.+.+ .. .++|
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~-~~~~~~~~~~-----ga~~v--~-~~~~~~~~~~-~~-~~~d  248 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPT-EVEQTVIEET-----KTNYY--N-SSNGYDKLKD-SV-GKFD  248 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCC-HHHHHHHHHH-----TCEEE--E-CTTCSHHHHH-HH-CCEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccc-hHHHHHHHHh-----CCcee--c-hHHHHHHHHH-hC-CCCC
Confidence            389999999 999999999999999999999876521 0112233333     12333  4 43  234444 33 5799


Q ss_pred             EEEEcccc
Q 022471          148 AVMHFAAV  155 (296)
Q Consensus       148 ~vi~~Ag~  155 (296)
                      ++|+++|.
T Consensus       249 ~vid~~g~  256 (366)
T 2cdc_A          249 VIIDATGA  256 (366)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999984

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.33  E-value=0.0027  Score=56.01  Aligned_cols=115  Identities=10%  Similarity=0.065  Sum_probs=71.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhh---CCCCCceEEEEccCCCHHHHHHHhhcCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQEL---FPEPGRLQFIYADLGDAKAVNKFFSENA  145 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~v~~~~~~~~  145 (296)
                      +++|.|+|| |.+|..++..|+..|+ +|+++|+++...+.....+...   .....++... .|   .    +.+  .+
T Consensus         4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d---~----~al--~~   72 (322)
T 1t2d_A            4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS-NT---Y----DDL--AG   72 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE-CC---G----GGG--TT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC-CC---H----HHh--CC
Confidence            378999998 9999999999999998 9999987654443322222221   1111223221 22   2    234  57


Q ss_pred             CcEEEEcccccCcCCCC---cChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEc
Q 022471          146 FDAVMHFAAVAYVGEST---LDPLKYYHNITSNTLVVLESMARHGVD-TLIYSS  195 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~~~---~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~S  195 (296)
                      .|+||.++|........   ..-.+....|+...+.+.+.+.+.... .+|++|
T Consensus        73 aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  126 (322)
T 1t2d_A           73 ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  126 (322)
T ss_dssp             CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            89999999864321110   013455777888888888888777544 444444

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=97.32  E-value=0.0016  Score=57.26  Aligned_cols=113  Identities=19%  Similarity=0.187  Sum_probs=71.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      |+|.|.|+ |.+|..++..|++.|+  +|+++++++...+.....+..............   +|.+    .+  .+.|+
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~d~~----~~--~~aDv   70 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA---GDYA----DL--KGSDV   70 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE---CCGG----GG--TTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe---CCHH----Hh--CCCCE
Confidence            47999998 9999999999999999  999999764333322222211110001112221   2322    23  57899


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEc
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSS  195 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~S  195 (296)
                      ||-+++....+  .....+....|....+.+++.+.+.... .+|.+|
T Consensus        71 Viiav~~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~t  116 (319)
T 1a5z_A           71 VIVAAGVPQKP--GETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (319)
T ss_dssp             EEECCCCCCCS--SCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEEccCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            99999864422  1234466778888888899888876544 455544

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.32  E-value=0.00018  Score=62.19  Aligned_cols=68  Identities=13%  Similarity=0.118  Sum_probs=47.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +|+++|+|+ |++|++++..|++.|+ +|+++.|+..+.+++.+          .+..     ...+++.+++  .+.|+
T Consensus       117 ~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~----------~~~~-----~~~~~~~~~~--~~aDi  178 (277)
T 3don_A          117 DAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL----------NINK-----INLSHAESHL--DEFDI  178 (277)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS----------CCEE-----ECHHHHHHTG--GGCSE
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH----------hccc-----ccHhhHHHHh--cCCCE
Confidence            389999997 8999999999999999 89999876544332211          1111     1345566655  46899


Q ss_pred             EEEcccc
Q 022471          149 VMHFAAV  155 (296)
Q Consensus       149 vi~~Ag~  155 (296)
                      |||+...
T Consensus       179 VInaTp~  185 (277)
T 3don_A          179 IINTTPA  185 (277)
T ss_dssp             EEECCC-
T ss_pred             EEECccC
Confidence            9998754

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.29  E-value=0.00026  Score=62.85  Aligned_cols=95  Identities=16%  Similarity=0.030  Sum_probs=60.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH---HHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~D  147 (296)
                      ++|+|+|| |+||..+++.+...|++|+++++++.+.+    .++++   +.. .  ..|..+.   +.+.++.  +++|
T Consensus       166 ~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~----~~~~l---Ga~-~--~~d~~~~~~~~~~~~~~--~~~d  232 (339)
T 1rjw_A          166 EWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLE----LAKEL---GAD-L--VVNPLKEDAAKFMKEKV--GGVH  232 (339)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHH----HHHHT---TCS-E--EECTTTSCHHHHHHHHH--SSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHH----HHHHC---CCC-E--EecCCCccHHHHHHHHh--CCCC
Confidence            79999999 88999999999999999999986543322    22332   111 1  2455543   2344433  5899


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccc
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTC  197 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~  197 (296)
                      ++|+++|...                 .....++.+++.  +++|.+++.
T Consensus       233 ~vid~~g~~~-----------------~~~~~~~~l~~~--G~~v~~g~~  263 (339)
T 1rjw_A          233 AAVVTAVSKP-----------------AFQSAYNSIRRG--GACVLVGLP  263 (339)
T ss_dssp             EEEESSCCHH-----------------HHHHHHHHEEEE--EEEEECCCC
T ss_pred             EEEECCCCHH-----------------HHHHHHHHhhcC--CEEEEeccc
Confidence            9999998310                 123344545443  488888763

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.28  E-value=0.00079  Score=59.61  Aligned_cols=69  Identities=14%  Similarity=0.125  Sum_probs=54.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHH-hhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF-FSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~-~~~~~~D~v  149 (296)
                      ++++|.|+ |.+|+.++++|.++|+ |+++++++...    + +.+     .++.++.+|.+|++.++++ +  .+.|.+
T Consensus       116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~----~-~~~-----~~~~~i~gd~~~~~~L~~a~i--~~a~~v  181 (336)
T 1lnq_A          116 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRK----K-VLR-----SGANFVHGDPTRVSDLEKANV--RGARAV  181 (336)
T ss_dssp             CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHH----H-HHH-----TTCEEEESCTTSHHHHHHTCS--TTEEEE
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhh----h-HHh-----CCcEEEEeCCCCHHHHHhcCh--hhccEE
Confidence            68999996 9999999999999999 99987654322    2 222     3578899999999999887 4  578988


Q ss_pred             EEcc
Q 022471          150 MHFA  153 (296)
Q Consensus       150 i~~A  153 (296)
                      |-+.
T Consensus       182 i~~~  185 (336)
T 1lnq_A          182 IVDL  185 (336)
T ss_dssp             EECC
T ss_pred             EEcC
Confidence            8765

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.27  E-value=0.00055  Score=59.20  Aligned_cols=72  Identities=11%  Similarity=0.203  Sum_probs=48.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +++++|+|+ ||+|++++..|++.|+ +|+++.|+..+.+++.+.+...    ..+....  +.+      +.  .+.|+
T Consensus       126 ~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~----~~~~~~~--~~~------l~--~~aDi  190 (281)
T 3o8q_A          126 GATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAY----GEVKAQA--FEQ------LK--QSYDV  190 (281)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGG----SCEEEEE--GGG------CC--SCEEE
T ss_pred             CCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhcc----CCeeEee--HHH------hc--CCCCE
Confidence            389999997 8999999999999996 9999998655444444433321    1233332  211      11  36899


Q ss_pred             EEEccccc
Q 022471          149 VMHFAAVA  156 (296)
Q Consensus       149 vi~~Ag~~  156 (296)
                      |||+....
T Consensus       191 IInaTp~g  198 (281)
T 3o8q_A          191 IINSTSAS  198 (281)
T ss_dssp             EEECSCCC
T ss_pred             EEEcCcCC
Confidence            99987654

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=97.24  E-value=0.0043  Score=54.32  Aligned_cols=113  Identities=16%  Similarity=0.144  Sum_probs=71.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhC--CCeEEEEecCCCCcchhhhhhhhh---CCCCCceEEEEccCCCHHHHHHHhhcCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQEL---FPEPGRLQFIYADLGDAKAVNKFFSENA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~v~~~~~~~~  145 (296)
                      |+|.|+|+ |.+|..++..|+..  |++|+++++++...+.....+...   .....++.. .   +|.+   . +  .+
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t---~d~~---~-l--~~   69 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG-S---NDYA---D-T--AN   69 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEE-E---SCGG---G-G--TT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEE-C---CCHH---H-H--CC
Confidence            47999998 99999999999985  799999998754433222111111   001112221 1   2322   2 3  57


Q ss_pred             CcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcc
Q 022471          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS  196 (296)
                      .|+||-+++....+  .....+.+..|......+.+.+.+.... .+|.+|.
T Consensus        70 aDvViiav~~p~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tN  119 (310)
T 1guz_A           70 SDIVIITAGLPRKP--GMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSN  119 (310)
T ss_dssp             CSEEEECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCS
T ss_pred             CCEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcC
Confidence            89999999854321  1234567788888888999988877543 5555543

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.23  E-value=0.0003  Score=62.66  Aligned_cols=97  Identities=13%  Similarity=0.128  Sum_probs=60.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH---HHHHHHhhcCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAF  146 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~  146 (296)
                      ++|+|+|| |+||..+++.+...|+ +|+++++++.+.    +.++++.   .. ..  .|..+.   +.+.++....++
T Consensus       169 ~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~----~~~~~~G---a~-~~--~~~~~~~~~~~v~~~~~g~g~  237 (348)
T 2d8a_A          169 KSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRR----ELAKKVG---AD-YV--INPFEEDVVKEVMDITDGNGV  237 (348)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHH----HHHHHHT---CS-EE--ECTTTSCHHHHHHHHTTTSCE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH----HHHHHhC---CC-EE--ECCCCcCHHHHHHHHcCCCCC
Confidence            78999999 9999999999999999 999988653322    2233331   11 12  344432   233333322469


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccc
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTC  197 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~  197 (296)
                      |++|+++|..                 ......++.+++.  +++|.+++.
T Consensus       238 D~vid~~g~~-----------------~~~~~~~~~l~~~--G~iv~~g~~  269 (348)
T 2d8a_A          238 DVFLEFSGAP-----------------KALEQGLQAVTPA--GRVSLLGLY  269 (348)
T ss_dssp             EEEEECSCCH-----------------HHHHHHHHHEEEE--EEEEECCCC
T ss_pred             CEEEECCCCH-----------------HHHHHHHHHHhcC--CEEEEEccC
Confidence            9999999831                 1123344555433  589988764

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.23  E-value=0.0011  Score=59.13  Aligned_cols=74  Identities=16%  Similarity=0.111  Sum_probs=49.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCC----CHHHHHHHhh---c
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG----DAKAVNKFFS---E  143 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----d~~~v~~~~~---~  143 (296)
                      ++|||+|+ |++|...++.+...|++|+++++++.+.    +.++++   +.. ..  .|..    ..+.+.+...   .
T Consensus       170 ~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~----~~~~~l---Ga~-~~--~~~~~~~~~~~~i~~~~~~~~g  238 (352)
T 1e3j_A          170 TTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRL----EVAKNC---GAD-VT--LVVDPAKEEESSIIERIRSAIG  238 (352)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH----HHHHHT---TCS-EE--EECCTTTSCHHHHHHHHHHHSS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHH----HHHHHh---CCC-EE--EcCcccccHHHHHHHHhccccC
Confidence            79999997 9999999998888999998887644322    223333   122 22  2333    2345555553   2


Q ss_pred             CCCcEEEEcccc
Q 022471          144 NAFDAVMHFAAV  155 (296)
Q Consensus       144 ~~~D~vi~~Ag~  155 (296)
                      .++|++|+++|.
T Consensus       239 ~g~D~vid~~g~  250 (352)
T 1e3j_A          239 DLPNVTIDCSGN  250 (352)
T ss_dssp             SCCSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999973

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=97.21  E-value=0.0027  Score=55.63  Aligned_cols=113  Identities=13%  Similarity=0.076  Sum_probs=68.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      |+|.|.|+ |.+|..++..|+..|+  +|++++++....+.....+.....-.........  ++.+    .+  .+.|+
T Consensus         8 mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~----~~--~~aD~   78 (319)
T 1lld_A            8 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPE----IC--RDADM   78 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGG----GG--TTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeC--CCHH----Hh--CCCCE
Confidence            78999998 9999999999999999  9999987542222101111111000011222111  1222    23  47899


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEE
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYS  194 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~  194 (296)
                      ||-+++.....  .....+....|......+++.+.+.+.+.+|.+
T Consensus        79 Vii~v~~~~~~--g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~  122 (319)
T 1lld_A           79 VVITAGPRQKP--GQSRLELVGATVNILKAIMPNLVKVAPNAIYML  122 (319)
T ss_dssp             EEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred             EEECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEE
Confidence            99999754322  234456777888888888888877544434433

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.20  E-value=0.00046  Score=64.02  Aligned_cols=73  Identities=18%  Similarity=0.281  Sum_probs=56.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+|+|.|+ |-+|+++|+.|.++|++|+++++++...    +.+.+.    -.+..+.+|-++++.++++=- .+.|++|
T Consensus         4 M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~----~~~~~~----~~~~~i~Gd~~~~~~L~~Agi-~~ad~~i   73 (461)
T 4g65_A            4 MKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRL----RELQDK----YDLRVVNGHASHPDVLHEAGA-QDADMLV   73 (461)
T ss_dssp             EEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHH----HHHHHH----SSCEEEESCTTCHHHHHHHTT-TTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHH----HHHHHh----cCcEEEEEcCCCHHHHHhcCC-CcCCEEE
Confidence            88999996 8999999999999999999998654332    222221    246788999999999988733 4789988


Q ss_pred             Ecc
Q 022471          151 HFA  153 (296)
Q Consensus       151 ~~A  153 (296)
                      -+.
T Consensus        74 a~t   76 (461)
T 4g65_A           74 AVT   76 (461)
T ss_dssp             ECC
T ss_pred             EEc
Confidence            643

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=97.17  E-value=0.0014  Score=58.52  Aligned_cols=78  Identities=21%  Similarity=0.203  Sum_probs=56.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCC-------------------CcchhhhhhhhhCCCCCceEEEEcc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSR-------------------GNIGAVKVLQELFPEPGRLQFIYAD  130 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~D  130 (296)
                      ++|+|.|+ ||+|+++++.|+..|. +++++|+..-                   +.+.+.+.+.++.+. .+++.+..+
T Consensus       119 ~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~-v~v~~~~~~  196 (353)
T 3h5n_A          119 AKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSE-ISVSEIALN  196 (353)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTT-SEEEEEECC
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCC-CeEEEeecc
Confidence            78999996 9999999999999997 7888886531                   112233444444433 467777888


Q ss_pred             CCCHHHHHHHhhcCCCcEEEEcc
Q 022471          131 LGDAKAVNKFFSENAFDAVMHFA  153 (296)
Q Consensus       131 l~d~~~v~~~~~~~~~D~vi~~A  153 (296)
                      +.+..++.. +  .++|+||.+.
T Consensus       197 i~~~~~~~~-~--~~~DlVvd~~  216 (353)
T 3h5n_A          197 INDYTDLHK-V--PEADIWVVSA  216 (353)
T ss_dssp             CCSGGGGGG-S--CCCSEEEECC
T ss_pred             cCchhhhhH-h--ccCCEEEEec
Confidence            877665555 5  5799999875

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=97.15  E-value=0.0059  Score=53.28  Aligned_cols=111  Identities=13%  Similarity=0.117  Sum_probs=70.8

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (296)
                      .+++|.|+|| |.+|..++..|+..|.  +|++.|++........+.. ...  ..++.. ..|   .    +.+  .+.
T Consensus        13 ~~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~-~~~--~~~i~~-t~d---~----~~l--~~a   78 (303)
T 2i6t_A           13 TVNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLE-IFN--LPNVEI-SKD---L----SAS--AHS   78 (303)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHH-HHT--CTTEEE-ESC---G----GGG--TTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHh-hhc--CCCeEE-eCC---H----HHH--CCC
Confidence            3478999996 9999999999999998  9999998664222222222 221  124443 223   2    223  579


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcc
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS  196 (296)
                      |+||-.||...+   -..-.+....|....+.+++.+.+.... .++++|-
T Consensus        79 D~Vi~aag~~~p---G~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sN  126 (303)
T 2i6t_A           79 KVVIFTVNSLGS---SQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQ  126 (303)
T ss_dssp             SEEEECCCC-------CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSS
T ss_pred             CEEEEcCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCC
Confidence            999999998422   2344567788888888899988886544 4445443

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.13  E-value=0.00087  Score=60.02  Aligned_cols=76  Identities=14%  Similarity=0.069  Sum_probs=49.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC-HHHHHHHhhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~D~  148 (296)
                      +++|||+| +|+||...++.+...|++|+++++++.+.    +.++++.   .. ..+.-+-.+ .+.+.++....++|+
T Consensus       190 g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~----~~~~~lG---a~-~vi~~~~~~~~~~v~~~~~g~g~D~  260 (363)
T 3uog_A          190 GDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKL----DRAFALG---AD-HGINRLEEDWVERVYALTGDRGADH  260 (363)
T ss_dssp             TCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHH----HHHHHHT---CS-EEEETTTSCHHHHHHHHHTTCCEEE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhH----HHHHHcC---CC-EEEcCCcccHHHHHHHHhCCCCceE
Confidence            38999999 89999999999988999999998654332    2233331   11 222211112 234444443347999


Q ss_pred             EEEccc
Q 022471          149 VMHFAA  154 (296)
Q Consensus       149 vi~~Ag  154 (296)
                      +|+++|
T Consensus       261 vid~~g  266 (363)
T 3uog_A          261 ILEIAG  266 (363)
T ss_dssp             EEEETT
T ss_pred             EEECCC
Confidence            999998

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.12  E-value=0.00071  Score=59.89  Aligned_cols=112  Identities=18%  Similarity=0.158  Sum_probs=70.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhh---CCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQEL---FPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (296)
                      ++|.|+|| |.+|..++..|+..|+ +|+++|++....+.....+...   .....++... .|   .    +.+  .+.
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d---~----~al--~~a   83 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-NN---Y----EYL--QNS   83 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SC---G----GGG--TTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-CC---H----HHH--CCC
Confidence            68999998 9999999999999999 9999998764444322222211   1111233321 23   2    234  578


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEc
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSS  195 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~S  195 (296)
                      |+||-++|...... . ...+....|....+.+.+.+.+.... .+|++|
T Consensus        84 D~VI~avg~p~k~g-~-tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  131 (328)
T 2hjr_A           84 DVVIITAGVPRKPN-M-TRSDLLTVNAKIVGSVAENVGKYCPNAFVICIT  131 (328)
T ss_dssp             SEEEECCSCCCCTT-C-CSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CEEEEcCCCCCCCC-C-chhhHHhhhHHHHHHHHHHHHHHCCCeEEEEec
Confidence            99999998654221 1 22245677888888888888776544 344443

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.11  E-value=0.0015  Score=58.37  Aligned_cols=77  Identities=18%  Similarity=0.072  Sum_probs=51.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCe-EEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhh----cCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS----ENA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~----~~~  145 (296)
                      .+|||+|+ |++|...++.+...|++ |+++++++.+.    +.++++ .  ..+..+..|-.+.+++.+.+.    ..+
T Consensus       181 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~----~~a~~l-~--~~~~~~~~~~~~~~~~~~~v~~~t~g~g  252 (363)
T 3m6i_A          181 DPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRL----KFAKEI-C--PEVVTHKVERLSAEESAKKIVESFGGIE  252 (363)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHH----HHHHHH-C--TTCEEEECCSCCHHHHHHHHHHHTSSCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH----HHHHHh-c--hhcccccccccchHHHHHHHHHHhCCCC
Confidence            78999998 99999999888889997 88887654332    233333 2  223333445444444443332    247


Q ss_pred             CcEEEEcccc
Q 022471          146 FDAVMHFAAV  155 (296)
Q Consensus       146 ~D~vi~~Ag~  155 (296)
                      +|++|.++|.
T Consensus       253 ~Dvvid~~g~  262 (363)
T 3m6i_A          253 PAVALECTGV  262 (363)
T ss_dssp             CSEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.09  E-value=0.00074  Score=58.13  Aligned_cols=72  Identities=19%  Similarity=0.220  Sum_probs=47.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +|+++|+|+ ||+|++++..|++.|+ +|+++.|+..+.+++.+.   ...  ..+...  ++.+   +..    .+.|+
T Consensus       120 ~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~---~~~--~~~~~~--~~~~---l~~----~~~Di  184 (272)
T 3pwz_A          120 NRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNE---LDH--SRLRIS--RYEA---LEG----QSFDI  184 (272)
T ss_dssp             TSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHH---HCC--TTEEEE--CSGG---GTT----CCCSE
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH---hcc--CCeeEe--eHHH---hcc----cCCCE
Confidence            389999997 8999999999999996 899998765443333332   211  123332  2222   111    46899


Q ss_pred             EEEccccc
Q 022471          149 VMHFAAVA  156 (296)
Q Consensus       149 vi~~Ag~~  156 (296)
                      |||+....
T Consensus       185 vInaTp~g  192 (272)
T 3pwz_A          185 VVNATSAS  192 (272)
T ss_dssp             EEECSSGG
T ss_pred             EEECCCCC
Confidence            99987653

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.09  E-value=0.0011  Score=59.33  Aligned_cols=80  Identities=16%  Similarity=0.126  Sum_probs=49.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEcc-C--CC-HHHHHHHh--hcC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD-L--GD-AKAVNKFF--SEN  144 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D-l--~d-~~~v~~~~--~~~  144 (296)
                      .+|+|+||+|++|...++.+...|++|++++++..+..+..+.++++.   .. ..+..+ .  .+ .+.+.++.  ...
T Consensus       169 ~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lG---a~-~vi~~~~~~~~~~~~~i~~~t~~~~~  244 (364)
T 1gu7_A          169 DWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELG---AT-QVITEDQNNSREFGPTIKEWIKQSGG  244 (364)
T ss_dssp             CEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHT---CS-EEEEHHHHHCGGGHHHHHHHHHHHTC
T ss_pred             cEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcC---Ce-EEEecCccchHHHHHHHHHHhhccCC
Confidence            789999999999999988888889999988764433112223333331   11 122111 0  11 22444443  235


Q ss_pred             CCcEEEEccc
Q 022471          145 AFDAVMHFAA  154 (296)
Q Consensus       145 ~~D~vi~~Ag  154 (296)
                      ++|++|.++|
T Consensus       245 g~Dvvid~~G  254 (364)
T 1gu7_A          245 EAKLALNCVG  254 (364)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            7999999997

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.08  E-value=0.0014  Score=58.52  Aligned_cols=99  Identities=18%  Similarity=0.179  Sum_probs=58.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCC-----C-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDS-----Y-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G-----~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~  143 (296)
                      |++|.|.||||.+|+++++.|++++     . +++.+.+..............+.. ...+.+.  |+ +.++    +  
T Consensus         9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~-~~~~~~~--~~-~~~~----~--   78 (352)
T 2nqt_A            9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTP-LAHRVVE--PT-EAAV----L--   78 (352)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGG-GTTCBCE--EC-CHHH----H--
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccc-cceeeec--cC-CHHH----h--
Confidence            4799999999999999999999987     4 676665322111111111000000 0112221  22 2222    3  


Q ss_pred             CCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccc
Q 022471          144 NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCA  198 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~  198 (296)
                      .++|+||.++|...                  +..+++.+ +.| .++|-.|+..
T Consensus        79 ~~~DvVf~alg~~~------------------s~~~~~~~-~~G-~~vIDlSa~~  113 (352)
T 2nqt_A           79 GGHDAVFLALPHGH------------------SAVLAQQL-SPE-TLIIDCGADF  113 (352)
T ss_dssp             TTCSEEEECCTTSC------------------CHHHHHHS-CTT-SEEEECSSTT
T ss_pred             cCCCEEEECCCCcc------------------hHHHHHHH-hCC-CEEEEECCCc
Confidence            37899999987432                  34577777 666 4888888864

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=97.06  E-value=0.0024  Score=55.86  Aligned_cols=114  Identities=14%  Similarity=0.099  Sum_probs=69.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCcchhhhhhhhhC-CCCCceEEEEccCCCHHHHHHHhhcCCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFSENAF  146 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (296)
                      ||+|.|.| +|.+|..++..|++.|  ++|++++++....+.....+.... ..+..+.....   |.    +.+  .+.
T Consensus         1 m~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---d~----~~~--~~a   70 (309)
T 1hyh_A            1 ARKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIN---DW----AAL--ADA   70 (309)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEES---CG----GGG--TTC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeC---CH----HHh--CCC
Confidence            47899999 7999999999999999  799999976433333322222110 00112332222   32    233  578


Q ss_pred             cEEEEcccccCc----CCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEc
Q 022471          147 DAVMHFAAVAYV----GESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSS  195 (296)
Q Consensus       147 D~vi~~Ag~~~~----~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~S  195 (296)
                      |+||-+++....    +.  ....+....|+.....+++.+.+.... .+|.+|
T Consensus        71 DvViiav~~~~~~~~~~g--~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~t  122 (309)
T 1hyh_A           71 DVVISTLGNIKLQQDNPT--GDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (309)
T ss_dssp             SEEEECCSCGGGTC---------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             CEEEEecCCcccCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence            999999886431    11  122345667888888888888776543 444443

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=97.00  E-value=0.001  Score=58.48  Aligned_cols=113  Identities=18%  Similarity=0.132  Sum_probs=68.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhh---CCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQEL---FPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (296)
                      ++|.|.|+ |.+|..++..|+..|+ +|+++++++...+.....+...   .....++... .|   .    +.+  .+.
T Consensus         5 ~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t-~d---~----~a~--~~a   73 (317)
T 2ewd_A            5 RKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT-DD---Y----ADI--SGS   73 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE-SC---G----GGG--TTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC-CC---H----HHh--CCC
Confidence            68999998 9999999999999998 9999998654333211111111   0111222211 22   2    233  578


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcc
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS  196 (296)
                      |+||-++|.......  ...+....|....+.+++.+.+.... .+|.+|.
T Consensus        74 DiVi~avg~p~~~g~--~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sN  122 (317)
T 2ewd_A           74 DVVIITASIPGRPKD--DRSELLFGNARILDSVAEGVKKYCPNAFVICITN  122 (317)
T ss_dssp             SEEEECCCCSSCCSS--CGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             CEEEEeCCCCCCCCC--cHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence            999999987543221  22344566777777777777766443 4444443

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.99  E-value=0.0015  Score=57.75  Aligned_cols=80  Identities=21%  Similarity=0.281  Sum_probs=52.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCC-------------------CCcchhhhhhhhhCCCCCceEEEEcc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS-------------------RGNIGAVKVLQELFPEPGRLQFIYAD  130 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~D  130 (296)
                      ++|+|.|+ ||+|+++++.|+..|. +++++|+..                   .+.+.+.+.+.++.+. .++..+..+
T Consensus        35 ~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~-v~v~~~~~~  112 (340)
T 3rui_A           35 TKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPL-MDATGVKLS  112 (340)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTT-CEEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCC-CEEEEEecc
Confidence            79999996 9999999999999997 788887643                   1122233444444432 345555544


Q ss_pred             CC--------------CHHHHHHHhhcCCCcEEEEccc
Q 022471          131 LG--------------DAKAVNKFFSENAFDAVMHFAA  154 (296)
Q Consensus       131 l~--------------d~~~v~~~~~~~~~D~vi~~Ag  154 (296)
                      +.              +.+.+.+++  .+.|+||++.-
T Consensus       113 i~~~g~~~~~~~~~~~~~~~l~~~l--~~~DlVvd~tD  148 (340)
T 3rui_A          113 IPMIGHKLVNEEAQHKDFDRLRALI--KEHDIIFLLVD  148 (340)
T ss_dssp             CCCTTSCCSCHHHHHHHHHHHHHHH--HHCSEEEECCS
T ss_pred             ccccCcccchhhhhcCCHHHHHhhh--ccCCEEEecCC
Confidence            41              234456666  45899998763

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.99  E-value=0.0016  Score=55.82  Aligned_cols=66  Identities=21%  Similarity=0.215  Sum_probs=47.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +++|+|.|+ ||.|++++..|++.|.+|+++.|+..+.+++. .   .   +  +...  ++.+.         .+.|+|
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~---~---~--~~~~--~~~~l---------~~~DiV  176 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-R---L---G--CDCF--MEPPK---------SAFDLI  176 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-H---H---T--CEEE--SSCCS---------SCCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-H---C---C--CeEe--cHHHh---------ccCCEE
Confidence            389999996 99999999999999999999988765544333 2   1   1  2222  22221         168999


Q ss_pred             EEccccc
Q 022471          150 MHFAAVA  156 (296)
Q Consensus       150 i~~Ag~~  156 (296)
                      ||+....
T Consensus       177 InaTp~G  183 (269)
T 3phh_A          177 INATSAS  183 (269)
T ss_dssp             EECCTTC
T ss_pred             EEcccCC
Confidence            9987654

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.98  E-value=0.0003  Score=62.12  Aligned_cols=36  Identities=33%  Similarity=0.383  Sum_probs=31.7

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN  107 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~  107 (296)
                      +|+|+||+|++|...++.+...|++|+++++++.+.
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~  188 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAA  188 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            799999999999999999888999999998765443

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.98  E-value=0.0035  Score=56.28  Aligned_cols=74  Identities=12%  Similarity=0.104  Sum_probs=48.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH---HHHHHHhhcCCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAF  146 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~  146 (296)
                      +.+|+|+||+|++|...++.+...|++|+++. ++.+    .+.++++   +. -..  .|..+.   +.+.++.. +++
T Consensus       165 g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~----~~~~~~l---Ga-~~v--i~~~~~~~~~~v~~~t~-g~~  232 (371)
T 3gqv_A          165 PVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHN----FDLAKSR---GA-EEV--FDYRAPNLAQTIRTYTK-NNL  232 (371)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGG----HHHHHHT---TC-SEE--EETTSTTHHHHHHHHTT-TCC
T ss_pred             CcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHH----HHHHHHc---CC-cEE--EECCCchHHHHHHHHcc-CCc
Confidence            38999999999999999999999999998875 3222    2233333   11 122  233333   23333332 469


Q ss_pred             cEEEEcccc
Q 022471          147 DAVMHFAAV  155 (296)
Q Consensus       147 D~vi~~Ag~  155 (296)
                      |++|.++|.
T Consensus       233 d~v~d~~g~  241 (371)
T 3gqv_A          233 RYALDCITN  241 (371)
T ss_dssp             CEEEESSCS
T ss_pred             cEEEECCCc
Confidence            999999983

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=96.95  E-value=0.0038  Score=55.57  Aligned_cols=97  Identities=14%  Similarity=0.080  Sum_probs=58.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      |++|.|.||+|.||+.+++.|.++.. +++.+.+......+..+....+... .     ..++.+.+   + +  .++|+
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~-~-----~~~~~~~~---~-~--~~vDv   71 (345)
T 2ozp_A            4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGR-T-----NLKFVPPE---K-L--EPADI   71 (345)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTT-C-----CCBCBCGG---G-C--CCCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCc-c-----cccccchh---H-h--cCCCE
Confidence            37899999999999999999998765 7777654322221111111111100 0     11223332   2 3  47999


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccc
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTC  197 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~  197 (296)
                      ||.+++..                  .+..+++.+.+.|. ++|-.|+.
T Consensus        72 V~~a~g~~------------------~s~~~a~~~~~aG~-~VId~Sa~  101 (345)
T 2ozp_A           72 LVLALPHG------------------VFAREFDRYSALAP-VLVDLSAD  101 (345)
T ss_dssp             EEECCCTT------------------HHHHTHHHHHTTCS-EEEECSST
T ss_pred             EEEcCCcH------------------HHHHHHHHHHHCCC-EEEEcCcc
Confidence            99998742                  13456666667665 78888874

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=96.94  E-value=0.0042  Score=55.28  Aligned_cols=107  Identities=19%  Similarity=0.212  Sum_probs=66.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCC-------------------CcchhhhhhhhhCCCCCceEEEEcc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSR-------------------GNIGAVKVLQELFPEPGRLQFIYAD  130 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~D  130 (296)
                      .+|+|.|+ ||+|.++++.|+..|. +++++|...-                   +.+.+.+.+.++.+. .++..+..+
T Consensus        37 ~~VlivG~-GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~-v~v~~~~~~  114 (346)
T 1y8q_A           37 SRVLLVGL-KGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPM-VDVKVDTED  114 (346)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTT-SEEEEECSC
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCC-eEEEEEecc
Confidence            78999995 8999999999999998 7888864320                   112223334444332 456666666


Q ss_pred             CCCHHHHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccccccc
Q 022471          131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYG  201 (296)
Q Consensus       131 l~d~~~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g  201 (296)
                      +.+  ...+++  .++|+||.+..         +        ...-..+-+++.+.+ ..+|..++.+.+|
T Consensus       115 ~~~--~~~~~~--~~~dvVv~~~d---------~--------~~~r~~ln~~~~~~~-ip~i~~~~~G~~G  163 (346)
T 1y8q_A          115 IEK--KPESFF--TQFDAVCLTCC---------S--------RDVIVKVDQICHKNS-IKFFTGDVFGYHG  163 (346)
T ss_dssp             GGG--CCHHHH--TTCSEEEEESC---------C--------HHHHHHHHHHHHHTT-CEEEEEEEEBTEE
T ss_pred             cCc--chHHHh--cCCCEEEEcCC---------C--------HHHHHHHHHHHHHcC-CCEEEEeecccEE
Confidence            643  224455  57899997642         1        122233556666666 4677776655544

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=96.94  E-value=0.0085  Score=52.39  Aligned_cols=112  Identities=13%  Similarity=0.142  Sum_probs=73.3

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhh---CCCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQEL---FPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      +|.|+|| |.+|..++..|+..|. +|+++|++....+.....+...   .....++... .|   .    +.+  .+.|
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d---~----~a~--~~aD   69 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS-NS---Y----EDM--RGSD   69 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SC---G----GGG--TTCS
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC-CC---H----HHh--CCCC
Confidence            5889998 9999999999998887 7999998654443322222221   1111222211 23   2    234  5789


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcc
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS  196 (296)
                      +||..||....+.  ..-.+....|+...+.+++.+.+.... .+|++|-
T Consensus        70 ~Vi~~ag~~~k~G--~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  117 (308)
T 2d4a_B           70 IVLVTAGIGRKPG--MTREQLLEANANTMADLAEKIKAYAKDAIVVITTN  117 (308)
T ss_dssp             EEEECCSCCCCSS--CCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             EEEEeCCCCCCCC--CcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            9999999754322  234567888999999999999887644 5666543

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.93  E-value=0.0012  Score=58.92  Aligned_cols=72  Identities=21%  Similarity=0.247  Sum_probs=49.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH-HHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA-KAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~D~v  149 (296)
                      .+|||+|+ |+||..+++.+...|++|+++++++.+.+.+    +++   +.. ..  .|..+. +..+++.  +++|++
T Consensus       181 ~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~----~~l---Ga~-~v--~~~~~~~~~~~~~~--~~~D~v  247 (360)
T 1piw_A          181 KKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA----MKM---GAD-HY--IATLEEGDWGEKYF--DTFDLI  247 (360)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH----HHH---TCS-EE--EEGGGTSCHHHHSC--SCEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH----HHc---CCC-EE--EcCcCchHHHHHhh--cCCCEE
Confidence            79999999 9999999998888999999999766544322    222   111 12  233333 2233332  579999


Q ss_pred             EEcccc
Q 022471          150 MHFAAV  155 (296)
Q Consensus       150 i~~Ag~  155 (296)
                      |.++|.
T Consensus       248 id~~g~  253 (360)
T 1piw_A          248 VVCASS  253 (360)
T ss_dssp             EECCSC
T ss_pred             EECCCC
Confidence            999985

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.92  E-value=0.0022  Score=57.56  Aligned_cols=72  Identities=15%  Similarity=0.141  Sum_probs=50.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      .+|||+|+ |+||...++.+...|++|+++++++.+.+    .++++   +.. .  ..|..+.+.++++.  .++|++|
T Consensus       196 ~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~----~a~~l---Ga~-~--vi~~~~~~~~~~~~--~g~Dvvi  262 (369)
T 1uuf_A          196 KKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE----AAKAL---GAD-E--VVNSRNADEMAAHL--KSFDFIL  262 (369)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH----HHHHH---TCS-E--EEETTCHHHHHTTT--TCEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHHc---CCc-E--EeccccHHHHHHhh--cCCCEEE
Confidence            78999997 89999999988889999999887554432    22233   111 1  23555655555544  5799999


Q ss_pred             Ecccc
Q 022471          151 HFAAV  155 (296)
Q Consensus       151 ~~Ag~  155 (296)
                      +++|.
T Consensus       263 d~~g~  267 (369)
T 1uuf_A          263 NTVAA  267 (369)
T ss_dssp             ECCSS
T ss_pred             ECCCC
Confidence            99984

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.92  E-value=0.00095  Score=59.83  Aligned_cols=74  Identities=20%  Similarity=0.218  Sum_probs=47.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHh-CCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC--HHHHHHHhhcCCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD--AKAVNKFFSENAF  146 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~  146 (296)
                      +.+|||+||+|++|...++.+.. .|++|+++++++.+.    +.++++   +.. ..  .|..+  .+.+.++ ...++
T Consensus       172 g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~----~~~~~l---Gad-~v--i~~~~~~~~~v~~~-~~~g~  240 (363)
T 4dvj_A          172 APAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQ----EWVKSL---GAH-HV--IDHSKPLAAEVAAL-GLGAP  240 (363)
T ss_dssp             EEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHH----HHHHHT---TCS-EE--ECTTSCHHHHHHTT-CSCCE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHH----HHHHHc---CCC-EE--EeCCCCHHHHHHHh-cCCCc
Confidence            38999999999999998877765 589999988643322    233333   111 11  23332  2233333 22579


Q ss_pred             cEEEEccc
Q 022471          147 DAVMHFAA  154 (296)
Q Consensus       147 D~vi~~Ag  154 (296)
                      |++|.++|
T Consensus       241 Dvvid~~g  248 (363)
T 4dvj_A          241 AFVFSTTH  248 (363)
T ss_dssp             EEEEECSC
T ss_pred             eEEEECCC
Confidence            99999987

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.91  E-value=0.00094  Score=58.67  Aligned_cols=72  Identities=21%  Similarity=0.277  Sum_probs=46.8

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEEE
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMH  151 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi~  151 (296)
                      +|+|+||+|++|...++.+...|++|+++++++.+.+    .++++   +... .+  |..+.+.+++ +...++|++|.
T Consensus       149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~----~~~~l---Ga~~-vi--~~~~~~~~~~-~~~~~~d~v~d  217 (324)
T 3nx4_A          149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHG----YLKSL---GANR-IL--SRDEFAESRP-LEKQLWAGAID  217 (324)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHH----HHHHH---TCSE-EE--EGGGSSCCCS-SCCCCEEEEEE
T ss_pred             eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH----HHHhc---CCCE-EE--ecCCHHHHHh-hcCCCccEEEE
Confidence            3999999999999999999999999999987654432    23333   1111 11  2222211222 22257999999


Q ss_pred             ccc
Q 022471          152 FAA  154 (296)
Q Consensus       152 ~Ag  154 (296)
                      ++|
T Consensus       218 ~~g  220 (324)
T 3nx4_A          218 TVG  220 (324)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            986

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.91  E-value=0.0013  Score=58.76  Aligned_cols=73  Identities=18%  Similarity=0.190  Sum_probs=50.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      .+|+|+|+ |+||...++.+...|++|+++++++.+.+.+.   +++   +.. .  ..|..+.+.+.++.  .++|++|
T Consensus       182 ~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~---~~l---Ga~-~--vi~~~~~~~~~~~~--~g~D~vi  249 (357)
T 2cf5_A          182 LRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEAL---QDL---GAD-D--YVIGSDQAKMSELA--DSLDYVI  249 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHH---TTS---CCS-C--EEETTCHHHHHHST--TTEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH---HHc---CCc-e--eeccccHHHHHHhc--CCCCEEE
Confidence            78999995 99999999988888999999987543322211   122   111 1  13445656666554  5799999


Q ss_pred             Ecccc
Q 022471          151 HFAAV  155 (296)
Q Consensus       151 ~~Ag~  155 (296)
                      .++|.
T Consensus       250 d~~g~  254 (357)
T 2cf5_A          250 DTVPV  254 (357)
T ss_dssp             ECCCS
T ss_pred             ECCCC
Confidence            99984

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.89  E-value=0.0018  Score=58.93  Aligned_cols=75  Identities=20%  Similarity=0.217  Sum_probs=48.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH---HHHHHHhhcCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENA  145 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~  145 (296)
                      +.+|||+|+ |++|...++.+...|+ +|+++++++.+.    +.++++.   .. ..  .|..+.   +.+.++....+
T Consensus       214 g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~----~~~~~lG---a~-~v--i~~~~~~~~~~i~~~t~g~g  282 (404)
T 3ip1_A          214 GDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRR----NLAKELG---AD-HV--IDPTKENFVEAVLDYTNGLG  282 (404)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHH----HHHHHHT---CS-EE--ECTTTSCHHHHHHHHTTTCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH----HHHHHcC---CC-EE--EcCCCCCHHHHHHHHhCCCC
Confidence            379999998 9999999988888999 888887544322    2333331   11 12  233332   34444443347


Q ss_pred             CcEEEEcccc
Q 022471          146 FDAVMHFAAV  155 (296)
Q Consensus       146 ~D~vi~~Ag~  155 (296)
                      +|++|.++|.
T Consensus       283 ~D~vid~~g~  292 (404)
T 3ip1_A          283 AKLFLEATGV  292 (404)
T ss_dssp             CSEEEECSSC
T ss_pred             CCEEEECCCC
Confidence            9999999983

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.89  E-value=0.0014  Score=58.49  Aligned_cols=74  Identities=20%  Similarity=0.190  Sum_probs=48.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH--HHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA--KAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~--~~v~~~~~~~~~D  147 (296)
                      .+|+|+|| |++|...++.+... |++|+++++++.+.    +.++++   +.. +.  .|..+.  +.+.++....++|
T Consensus       188 ~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~----~~~~~l---Ga~-~v--i~~~~~~~~~v~~~~~g~g~D  256 (359)
T 1h2b_A          188 AYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKL----KLAERL---GAD-HV--VDARRDPVKQVMELTRGRGVN  256 (359)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHH----HHHHHT---TCS-EE--EETTSCHHHHHHHHTTTCCEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHH----HHHHHh---CCC-EE--EeccchHHHHHHHHhCCCCCc
Confidence            79999999 89999999888888 99999998644322    223333   111 12  344443  3444433223799


Q ss_pred             EEEEcccc
Q 022471          148 AVMHFAAV  155 (296)
Q Consensus       148 ~vi~~Ag~  155 (296)
                      ++|.++|.
T Consensus       257 vvid~~G~  264 (359)
T 1h2b_A          257 VAMDFVGS  264 (359)
T ss_dssp             EEEESSCC
T ss_pred             EEEECCCC
Confidence            99999983

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.88  E-value=0.001  Score=59.39  Aligned_cols=78  Identities=12%  Similarity=0.058  Sum_probs=47.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH--HHHHHHhhc-CCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA--KAVNKFFSE-NAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~--~~v~~~~~~-~~~D  147 (296)
                      .+|||+||+|++|...++.+...|++|+++.+...+..+..+.++++.   .. ..+  |..+.  +.+.++... .++|
T Consensus       169 ~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lG---a~-~vi--~~~~~~~~~~~~~~~~~~~~D  242 (357)
T 1zsy_A          169 DSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLG---AE-HVI--TEEELRRPEMKNFFKDMPQPR  242 (357)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTT---CS-EEE--EHHHHHSGGGGGTTSSSCCCS
T ss_pred             CEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcC---Cc-EEE--ecCcchHHHHHHHHhCCCCce
Confidence            799999999999999988888889998887754433222233344331   11 122  21111  223333322 2599


Q ss_pred             EEEEccc
Q 022471          148 AVMHFAA  154 (296)
Q Consensus       148 ~vi~~Ag  154 (296)
                      ++|.++|
T Consensus       243 vvid~~g  249 (357)
T 1zsy_A          243 LALNCVG  249 (357)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999987

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=96.88  E-value=0.0011  Score=58.79  Aligned_cols=94  Identities=14%  Similarity=0.151  Sum_probs=58.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH---HHHHHHhhcCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAF  146 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~  146 (296)
                      .+|+|+|| |++|..+++.+...|+ +|+++++++.+.+    .++++ .  .  .  ..|..+.   +.+.++. ..++
T Consensus       166 ~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~----~~~~l-a--~--~--v~~~~~~~~~~~~~~~~-~~g~  232 (343)
T 2dq4_A          166 KSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLA----FARPY-A--D--R--LVNPLEEDLLEVVRRVT-GSGV  232 (343)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHG----GGTTT-C--S--E--EECTTTSCHHHHHHHHH-SSCE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH----HHHHh-H--H--h--ccCcCccCHHHHHHHhc-CCCC
Confidence            78999999 9999999998888999 9999986543222    22221 1  1  1  2344332   2344433 3479


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      |++|+++|..                 ......++.+++.  +++|.++.
T Consensus       233 D~vid~~g~~-----------------~~~~~~~~~l~~~--G~iv~~g~  263 (343)
T 2dq4_A          233 EVLLEFSGNE-----------------AAIHQGLMALIPG--GEARILGI  263 (343)
T ss_dssp             EEEEECSCCH-----------------HHHHHHHHHEEEE--EEEEECCC
T ss_pred             CEEEECCCCH-----------------HHHHHHHHHHhcC--CEEEEEec
Confidence            9999999831                 1123345555433  48888876

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=96.88  E-value=0.0087  Score=52.96  Aligned_cols=102  Identities=15%  Similarity=0.140  Sum_probs=60.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCC---CCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLS---RGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENA  145 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~  145 (296)
                      |++|.|.||||.+|.++++.|.+. .+++..+..+.   .......+....+... ....+...  .+.+   +++  .+
T Consensus         4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~-~~~~v~~~--~~~~---~~~--~~   75 (337)
T 3dr3_A            4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGI-VELPLQPM--SDIS---EFS--PG   75 (337)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTT-CCCBEEEE--SSGG---GTC--TT
T ss_pred             ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCc-cceeEecc--CCHH---HHh--cC
Confidence            579999999999999999999985 56777765433   2222222211111110 12222222  0222   222  36


Q ss_pred             CcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccc
Q 022471          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCA  198 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~  198 (296)
                      +|+||-|.+.                  ..+..+++.+.+.|. ++|=.|+..
T Consensus        76 ~Dvvf~a~p~------------------~~s~~~~~~~~~~g~-~vIDlSa~f  109 (337)
T 3dr3_A           76 VDVVFLATAH------------------EVSHDLAPQFLEAGC-VVFDLSGAF  109 (337)
T ss_dssp             CSEEEECSCH------------------HHHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             CCEEEECCCh------------------HHHHHHHHHHHHCCC-EEEEcCCcc
Confidence            8999988762                  124556677777775 788788753

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.87  E-value=0.00077  Score=60.79  Aligned_cols=75  Identities=11%  Similarity=0.102  Sum_probs=49.8

Q ss_pred             cEEEEEc-CCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH---HHHHHHhhcCCC
Q 022471           71 THVLVTG-GAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAF  146 (296)
Q Consensus        71 k~vlVTG-asG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~  146 (296)
                      .+|+|.| |+|++|...++.+...|++|+++++++.+.    +.++++.   .. ..  .|..+.   +.+.++....++
T Consensus       172 ~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~----~~~~~lG---a~-~~--~~~~~~~~~~~v~~~t~~~g~  241 (379)
T 3iup_A          172 HSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQA----DLLKAQG---AV-HV--CNAASPTFMQDLTEALVSTGA  241 (379)
T ss_dssp             CSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHH----HHHHHTT---CS-CE--EETTSTTHHHHHHHHHHHHCC
T ss_pred             CEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH----HHHHhCC---Cc-EE--EeCCChHHHHHHHHHhcCCCc
Confidence            6799997 999999999998888999999998644332    2333331   11 12  233332   344444433479


Q ss_pred             cEEEEcccc
Q 022471          147 DAVMHFAAV  155 (296)
Q Consensus       147 D~vi~~Ag~  155 (296)
                      |++|.++|.
T Consensus       242 d~v~d~~g~  250 (379)
T 3iup_A          242 TIAFDATGG  250 (379)
T ss_dssp             CEEEESCEE
T ss_pred             eEEEECCCc
Confidence            999999984

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.86  E-value=0.00099  Score=59.16  Aligned_cols=74  Identities=14%  Similarity=0.121  Sum_probs=48.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhC--CCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC-HHHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~D  147 (296)
                      .+|||+|| |+||...++.+...  |++|+++++++.+.    +.++++.   .. ..  .|..+ .+.++++.+..++|
T Consensus       172 ~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~----~~~~~lG---a~-~v--i~~~~~~~~~~~~~~g~g~D  240 (344)
T 2h6e_A          172 PVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHR----DFALELG---AD-YV--SEMKDAESLINKLTDGLGAS  240 (344)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHH----HHHHHHT---CS-EE--ECHHHHHHHHHHHHTTCCEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHH----HHHHHhC---CC-EE--eccccchHHHHHhhcCCCcc
Confidence            79999999 99999999988888  99999988644332    2233331   11 11  23333 33344433223799


Q ss_pred             EEEEcccc
Q 022471          148 AVMHFAAV  155 (296)
Q Consensus       148 ~vi~~Ag~  155 (296)
                      ++|+++|.
T Consensus       241 ~vid~~g~  248 (344)
T 2h6e_A          241 IAIDLVGT  248 (344)
T ss_dssp             EEEESSCC
T ss_pred             EEEECCCC
Confidence            99999983

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.86  E-value=0.0024  Score=57.55  Aligned_cols=74  Identities=12%  Similarity=0.129  Sum_probs=47.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCC--CHHHHH----HHhhc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG--DAKAVN----KFFSE  143 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--d~~~v~----~~~~~  143 (296)
                      .+|||+| +|++|...++.+...| ++|+++++++.+.    +.++++   +.. ..  .|..  +.+++.    ++...
T Consensus       197 ~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~----~~~~~l---Ga~-~v--i~~~~~~~~~~~~~v~~~~~g  265 (380)
T 1vj0_A          197 KTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRL----KLAEEI---GAD-LT--LNRRETSVEERRKAIMDITHG  265 (380)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHH----HHHHHT---TCS-EE--EETTTSCHHHHHHHHHHHTTT
T ss_pred             CEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHH----HHHHHc---CCc-EE--EeccccCcchHHHHHHHHhCC
Confidence            7999999 8999999999888899 5999998654332    223332   111 22  2333  133333    32222


Q ss_pred             CCCcEEEEcccc
Q 022471          144 NAFDAVMHFAAV  155 (296)
Q Consensus       144 ~~~D~vi~~Ag~  155 (296)
                      .++|++|+++|.
T Consensus       266 ~g~Dvvid~~g~  277 (380)
T 1vj0_A          266 RGADFILEATGD  277 (380)
T ss_dssp             SCEEEEEECSSC
T ss_pred             CCCcEEEECCCC
Confidence            369999999983

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.84  E-value=0.0015  Score=57.97  Aligned_cols=67  Identities=19%  Similarity=0.196  Sum_probs=46.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      .+|+|+|+ |+||...++.+...|++|+++++++.+.+.    ++++   +.. ..+    .+.+.+    . .++|++|
T Consensus       178 ~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~----~~~l---Ga~-~v~----~~~~~~----~-~~~D~vi  239 (348)
T 3two_A          178 TKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQD----ALSM---GVK-HFY----TDPKQC----K-EELDFII  239 (348)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHH----HHHT---TCS-EEE----SSGGGC----C-SCEEEEE
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHH----HHhc---CCC-eec----CCHHHH----h-cCCCEEE
Confidence            79999997 999999999888899999999876654432    2332   122 222    333322    2 2799999


Q ss_pred             Ecccc
Q 022471          151 HFAAV  155 (296)
Q Consensus       151 ~~Ag~  155 (296)
                      +++|.
T Consensus       240 d~~g~  244 (348)
T 3two_A          240 STIPT  244 (348)
T ss_dssp             ECCCS
T ss_pred             ECCCc
Confidence            99984

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=96.82  E-value=0.0006  Score=63.11  Aligned_cols=34  Identities=21%  Similarity=0.185  Sum_probs=30.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      +|+|+|||++ +||+.+++.|+..|++|+++++++
T Consensus       265 GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~  298 (488)
T 3ond_A          265 GKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDP  298 (488)
T ss_dssp             TCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCH
Confidence            4999999986 999999999999999999998754

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.82  E-value=0.00095  Score=60.80  Aligned_cols=71  Identities=18%  Similarity=0.247  Sum_probs=48.0

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      .+++|+|.|+ |++|..+++.|...|+ +|++++|+..+..   +..++.   +  ...  .+.   +++.+++  .+.|
T Consensus       166 ~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~---~la~~~---g--~~~--~~~---~~l~~~l--~~aD  229 (404)
T 1gpj_A          166 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAV---ELARDL---G--GEA--VRF---DELVDHL--ARSD  229 (404)
T ss_dssp             TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHH---HHHHHH---T--CEE--CCG---GGHHHHH--HTCS
T ss_pred             cCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHH---HHHHHc---C--Cce--ecH---HhHHHHh--cCCC
Confidence            3489999998 9999999999999998 8999886543221   222222   1  111  222   3455555  4689


Q ss_pred             EEEEcccc
Q 022471          148 AVMHFAAV  155 (296)
Q Consensus       148 ~vi~~Ag~  155 (296)
                      +||.+.+.
T Consensus       230 vVi~at~~  237 (404)
T 1gpj_A          230 VVVSATAA  237 (404)
T ss_dssp             EEEECCSS
T ss_pred             EEEEccCC
Confidence            99999764

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=96.81  E-value=0.0053  Score=58.74  Aligned_cols=79  Identities=20%  Similarity=0.294  Sum_probs=52.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCc-------------------chhhhhhhhhCCCCCceEEEEcc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGN-------------------IGAVKVLQELFPEPGRLQFIYAD  130 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~D  130 (296)
                      .+|+|.|+ ||+|.++++.|+..|. +++++|...-..                   +.+.+.+.++.+. .++..+..+
T Consensus        18 s~VlVVGa-GGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~-v~V~a~~~~   95 (640)
T 1y8q_B           18 GRVLVVGA-GGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPK-ANIVAYHDS   95 (640)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTT-CEEEEEESC
T ss_pred             CeEEEECc-CHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCC-CeEEEEecc
Confidence            68999996 9999999999999997 888888543111                   1122233333322 466677777


Q ss_pred             CCCHHHHHHHhhcCCCcEEEEcc
Q 022471          131 LGDAKAVNKFFSENAFDAVMHFA  153 (296)
Q Consensus       131 l~d~~~v~~~~~~~~~D~vi~~A  153 (296)
                      +++......++  .++|+||.+.
T Consensus        96 i~~~~~~~~~~--~~~DlVvda~  116 (640)
T 1y8q_B           96 IMNPDYNVEFF--RQFILVMNAL  116 (640)
T ss_dssp             TTSTTSCHHHH--TTCSEEEECC
T ss_pred             cchhhhhHhhh--cCCCEEEECC
Confidence            76432223445  5789999874

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=96.77  E-value=0.0024  Score=56.45  Aligned_cols=71  Identities=20%  Similarity=0.141  Sum_probs=47.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH---HHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~D  147 (296)
                      ++|||+|+ |++|...++.+...|++|+++++++.+.    +.++++   +.. ..  .|..+.   +.+.+..  +++|
T Consensus       168 ~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~----~~~~~l---Ga~-~~--i~~~~~~~~~~~~~~~--g~~d  234 (340)
T 3s2e_A          168 QWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKL----NLARRL---GAE-VA--VNARDTDPAAWLQKEI--GGAH  234 (340)
T ss_dssp             SEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHH----HHHHHT---TCS-EE--EETTTSCHHHHHHHHH--SSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHH----HHHHHc---CCC-EE--EeCCCcCHHHHHHHhC--CCCC
Confidence            79999997 8999999999988999999998654332    233333   111 12  233332   2333322  5899


Q ss_pred             EEEEccc
Q 022471          148 AVMHFAA  154 (296)
Q Consensus       148 ~vi~~Ag  154 (296)
                      ++|.++|
T Consensus       235 ~vid~~g  241 (340)
T 3s2e_A          235 GVLVTAV  241 (340)
T ss_dssp             EEEESSC
T ss_pred             EEEEeCC
Confidence            9999987

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.72  E-value=0.0013  Score=56.92  Aligned_cols=66  Identities=11%  Similarity=0.114  Sum_probs=45.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      ++++|+|+ ||.|++++..|++.|+ +|+++.|+..+.+++.   +       .+..+     +.+++.+ +   +.|+|
T Consensus       123 k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La---~-------~~~~~-----~~~~l~~-l---~~Div  182 (282)
T 3fbt_A          123 NICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIY---G-------EFKVI-----SYDELSN-L---KGDVI  182 (282)
T ss_dssp             SEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHC---T-------TSEEE-----EHHHHTT-C---CCSEE
T ss_pred             CEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH---H-------hcCcc-----cHHHHHh-c---cCCEE
Confidence            89999997 8999999999999998 8999987543322211   1       12211     2233433 2   58999


Q ss_pred             EEccccc
Q 022471          150 MHFAAVA  156 (296)
Q Consensus       150 i~~Ag~~  156 (296)
                      ||+....
T Consensus       183 InaTp~G  189 (282)
T 3fbt_A          183 INCTPKG  189 (282)
T ss_dssp             EECSSTT
T ss_pred             EECCccC
Confidence            9988653

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.71  E-value=0.0026  Score=57.21  Aligned_cols=73  Identities=14%  Similarity=0.121  Sum_probs=48.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCC----C-HHHHHHHhhcC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG----D-AKAVNKFFSEN  144 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----d-~~~v~~~~~~~  144 (296)
                      .+|+|+|+ |+||...++.+...|+ +|+++++++.+.+    .++++   +.. +.  .|..    + .+.++++.. +
T Consensus       195 ~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~----~a~~l---Ga~-~v--i~~~~~~~~~~~~i~~~~~-g  262 (378)
T 3uko_A          195 SNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYE----TAKKF---GVN-EF--VNPKDHDKPIQEVIVDLTD-G  262 (378)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHH----HHHTT---TCC-EE--ECGGGCSSCHHHHHHHHTT-S
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH----HHHHc---CCc-EE--EccccCchhHHHHHHHhcC-C
Confidence            78999998 9999999988888899 7999886654432    22232   111 12  2332    2 234444443 4


Q ss_pred             CCcEEEEcccc
Q 022471          145 AFDAVMHFAAV  155 (296)
Q Consensus       145 ~~D~vi~~Ag~  155 (296)
                      ++|++|.++|.
T Consensus       263 g~D~vid~~g~  273 (378)
T 3uko_A          263 GVDYSFECIGN  273 (378)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            89999999983

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.68  E-value=0.0026  Score=60.39  Aligned_cols=80  Identities=21%  Similarity=0.276  Sum_probs=53.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCC-------------------CcchhhhhhhhhCCCCCceEEEEcc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSR-------------------GNIGAVKVLQELFPEPGRLQFIYAD  130 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~D  130 (296)
                      .+|+|.|+ ||+|.++++.|+..|. +++++|...-                   +.+.+.+.+.++.+. .++..+..+
T Consensus       327 arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~-V~v~~~~~~  404 (615)
T 4gsl_A          327 TKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPL-MDATGVKLS  404 (615)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTT-CEEEEECCC
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCC-cEEEEeecc
Confidence            79999996 9999999999999997 7888886431                   122234444555432 455555554


Q ss_pred             CC--------------CHHHHHHHhhcCCCcEEEEccc
Q 022471          131 LG--------------DAKAVNKFFSENAFDAVMHFAA  154 (296)
Q Consensus       131 l~--------------d~~~v~~~~~~~~~D~vi~~Ag  154 (296)
                      +.              +.+.+.+++  .+.|+||++..
T Consensus       405 Ipm~gh~v~~e~~~~l~~~~l~~ll--~~~DlVvd~tD  440 (615)
T 4gsl_A          405 IPMIGHKLVNEEAQHKDFDRLRALI--KEHDIIFLLVD  440 (615)
T ss_dssp             CCCTTCCCSCHHHHHHHHHHHHHHH--HHCSEEEECCS
T ss_pred             ccccCccccchhhhcCCHHHHHHHh--hcCCEEEecCC
Confidence            41              234455666  46899998864

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.68  E-value=0.0085  Score=53.84  Aligned_cols=68  Identities=25%  Similarity=0.311  Sum_probs=51.4

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      .+|+|+|.|+ |.+|+.+++++.+.|++|++++..+....  ..    .     .-.++..|..|.+.+.++++  ++|+
T Consensus        11 ~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~--~~----~-----ad~~~~~~~~d~~~l~~~~~--~~dv   76 (377)
T 3orq_A           11 FGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPC--RY----V-----AHEFIQAKYDDEKALNQLGQ--KCDV   76 (377)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTT--GG----G-----SSEEEECCTTCHHHHHHHHH--HCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChh--hh----h-----CCEEEECCCCCHHHHHHHHH--hCCc
Confidence            4489999995 88999999999999999999986543211  11    1     11356789999999999985  4788


Q ss_pred             EE
Q 022471          149 VM  150 (296)
Q Consensus       149 vi  150 (296)
                      |.
T Consensus        77 i~   78 (377)
T 3orq_A           77 IT   78 (377)
T ss_dssp             EE
T ss_pred             ce
Confidence            74

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.68  E-value=0.0018  Score=56.88  Aligned_cols=71  Identities=20%  Similarity=0.204  Sum_probs=49.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      .+|+|+||+|++|...++.+...|++|+++++..    + .+.++++.   .. .  ..|..+.+.+.+.+  .++|++|
T Consensus       154 ~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~----~-~~~~~~lG---a~-~--~i~~~~~~~~~~~~--~g~D~v~  220 (321)
T 3tqh_A          154 DVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR----N-HAFLKALG---AE-Q--CINYHEEDFLLAIS--TPVDAVI  220 (321)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH----H-HHHHHHHT---CS-E--EEETTTSCHHHHCC--SCEEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc----h-HHHHHHcC---CC-E--EEeCCCcchhhhhc--cCCCEEE
Confidence            7999999999999999999999999998887321    1 23334432   11 1  23444444344444  5799999


Q ss_pred             Eccc
Q 022471          151 HFAA  154 (296)
Q Consensus       151 ~~Ag  154 (296)
                      .++|
T Consensus       221 d~~g  224 (321)
T 3tqh_A          221 DLVG  224 (321)
T ss_dssp             ESSC
T ss_pred             ECCC
Confidence            9987

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=96.68  E-value=0.0026  Score=60.25  Aligned_cols=80  Identities=21%  Similarity=0.281  Sum_probs=52.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCC-------------------CCcchhhhhhhhhCCCCCceEEEEcc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS-------------------RGNIGAVKVLQELFPEPGRLQFIYAD  130 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~D  130 (296)
                      ++|+|.|+ ||+|.++++.|+..|. +++++|...                   .+.+.+.+.++++.+. .+++.+..+
T Consensus       328 ~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~-v~v~~~~~~  405 (598)
T 3vh1_A          328 TKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPL-MDATGVKLS  405 (598)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTT-CEEEEECCC
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCC-cEEEEEecc
Confidence            79999995 9999999999999997 788886541                   1122334444444332 455555555


Q ss_pred             CC--------------CHHHHHHHhhcCCCcEEEEccc
Q 022471          131 LG--------------DAKAVNKFFSENAFDAVMHFAA  154 (296)
Q Consensus       131 l~--------------d~~~v~~~~~~~~~D~vi~~Ag  154 (296)
                      +.              +.+.+.+++  .+.|+||++..
T Consensus       406 I~~pgh~i~~~~~~~l~~~~l~~li--~~~DvVvdatD  441 (598)
T 3vh1_A          406 IPMIGHKLVNEEAQHKDFDRLRALI--KEHDIIFLLVD  441 (598)
T ss_dssp             CCCSSCCCCSHHHHHHHHHHHHHHH--HHCSEEEECCS
T ss_pred             ccccCcccccccccccCHHHHHHHH--hcCCEEEECCC
Confidence            41              234556666  35899998753

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.66  E-value=0.014  Score=52.38  Aligned_cols=74  Identities=20%  Similarity=0.172  Sum_probs=50.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccC------------------C
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL------------------G  132 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl------------------~  132 (296)
                      ++|+|.|+ |.+|..+++.+...|++|++++++..+.+.+.    ++     ...++..|+                  .
T Consensus       185 ~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~----~l-----Ga~~~~l~~~~~~~~gya~~~~~~~~~~  254 (381)
T 3p2y_A          185 ASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVR----SV-----GAQWLDLGIDAAGEGGYARELSEAERAQ  254 (381)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHH----HT-----TCEECCCC-------------CHHHHHH
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----Hc-----CCeEEeccccccccccchhhhhHHHHhh
Confidence            79999997 99999999999999999999997654433222    21     122222211                  1


Q ss_pred             CHHHHHHHhhcCCCcEEEEccccc
Q 022471          133 DAKAVNKFFSENAFDAVMHFAAVA  156 (296)
Q Consensus       133 d~~~v~~~~~~~~~D~vi~~Ag~~  156 (296)
                      +.+.+.+++  .+.|+||.++.+.
T Consensus       255 ~~~~l~e~l--~~aDIVI~tv~iP  276 (381)
T 3p2y_A          255 QQQALEDAI--TKFDIVITTALVP  276 (381)
T ss_dssp             HHHHHHHHH--TTCSEEEECCCCT
T ss_pred             hHHHHHHHH--hcCCEEEECCCCC
Confidence            234556666  6799999987553

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=96.65  E-value=0.0035  Score=55.83  Aligned_cols=72  Identities=17%  Similarity=0.164  Sum_probs=46.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCC--C-HH---HHHHHhhc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG--D-AK---AVNKFFSE  143 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--d-~~---~v~~~~~~  143 (296)
                      .+|+|+|+ |++|...++.+...|+ +|+++++++.+.    +.++++   +.. ..  .|..  + .+   .+.+... 
T Consensus       173 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~----~~a~~l---Ga~-~v--i~~~~~~~~~~~~~i~~~~~-  240 (356)
T 1pl8_A          173 HKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRL----SKAKEI---GAD-LV--LQISKESPQEIARKVEGQLG-  240 (356)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHH----HHHHHT---TCS-EE--EECSSCCHHHHHHHHHHHHT-
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH----HHHHHh---CCC-EE--EcCcccccchHHHHHHHHhC-
Confidence            79999996 9999999988888999 899988644322    223333   111 22  2333  2 22   2233222 


Q ss_pred             CCCcEEEEccc
Q 022471          144 NAFDAVMHFAA  154 (296)
Q Consensus       144 ~~~D~vi~~Ag  154 (296)
                      .++|++|+++|
T Consensus       241 ~g~D~vid~~g  251 (356)
T 1pl8_A          241 CKPEVTIECTG  251 (356)
T ss_dssp             SCCSEEEECSC
T ss_pred             CCCCEEEECCC
Confidence            47999999997

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=96.64  E-value=0.002  Score=53.29  Aligned_cols=34  Identities=21%  Similarity=0.331  Sum_probs=30.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      +++|.|.| +|.+|..+++.|++.|++|++++|+.
T Consensus        28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~   61 (215)
T 2vns_A           28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRNP   61 (215)
T ss_dssp             -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            37899999 89999999999999999999998754

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=96.62  E-value=0.0067  Score=54.36  Aligned_cols=73  Identities=16%  Similarity=0.174  Sum_probs=47.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC-----HHHHHHHhhcC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-----AKAVNKFFSEN  144 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-----~~~v~~~~~~~  144 (296)
                      .+|||+|+ |+||...++.+...|+ +|+++++++.+.+    .++++   +.. ..  .|..+     .+.+.++.. +
T Consensus       194 ~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~----~~~~l---Ga~-~v--i~~~~~~~~~~~~~~~~~~-~  261 (374)
T 1cdo_A          194 STCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFE----KAKVF---GAT-DF--VNPNDHSEPISQVLSKMTN-G  261 (374)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH----HHHHT---TCC-EE--ECGGGCSSCHHHHHHHHHT-S
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHH----HHHHh---CCc-eE--EeccccchhHHHHHHHHhC-C
Confidence            79999995 9999999998888999 7888876544332    22332   111 11  34332     223444333 4


Q ss_pred             CCcEEEEcccc
Q 022471          145 AFDAVMHFAAV  155 (296)
Q Consensus       145 ~~D~vi~~Ag~  155 (296)
                      ++|++|+++|.
T Consensus       262 g~D~vid~~g~  272 (374)
T 1cdo_A          262 GVDFSLECVGN  272 (374)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999973

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.61  E-value=0.0067  Score=54.36  Aligned_cols=73  Identities=14%  Similarity=0.103  Sum_probs=47.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC-----HHHHHHHhhcC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-----AKAVNKFFSEN  144 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-----~~~v~~~~~~~  144 (296)
                      ++|||+|+ |+||..+++.+...|+ +|+++++++.+.+    .++++   +.. ..  .|..+     .+.+.++.. +
T Consensus       193 ~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~----~~~~l---Ga~-~v--i~~~~~~~~~~~~~~~~~~-~  260 (374)
T 2jhf_A          193 STCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFA----KAKEV---GAT-EC--VNPQDYKKPIQEVLTEMSN-G  260 (374)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH----HHHHT---TCS-EE--ECGGGCSSCHHHHHHHHTT-S
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH----HHHHh---CCc-eE--ecccccchhHHHHHHHHhC-C
Confidence            79999995 9999999998888999 7888876544332    22332   111 11  24332     223444332 4


Q ss_pred             CCcEEEEcccc
Q 022471          145 AFDAVMHFAAV  155 (296)
Q Consensus       145 ~~D~vi~~Ag~  155 (296)
                      ++|++|+++|.
T Consensus       261 g~D~vid~~g~  271 (374)
T 2jhf_A          261 GVDFSFEVIGR  271 (374)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCcEEEECCCC
Confidence            79999999973

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.60  E-value=0.0066  Score=54.78  Aligned_cols=37  Identities=24%  Similarity=0.146  Sum_probs=32.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN  107 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~  107 (296)
                      +++|+|+|+ |.+|..+++.+...|++|+++++++.+.
T Consensus       172 g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~  208 (384)
T 1l7d_A          172 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATK  208 (384)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            389999995 9999999999999999999998765443

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.60  E-value=0.004  Score=56.42  Aligned_cols=74  Identities=20%  Similarity=0.278  Sum_probs=49.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC----HHHHHHHhhcCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD----AKAVNKFFSENA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d----~~~v~~~~~~~~  145 (296)
                      .+|+|+|+ |+||...++.+...|+ +|+++++++.+.    +.++++   +  .+.+  |..+    .+.+.++....+
T Consensus       187 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~----~~a~~l---G--a~~i--~~~~~~~~~~~~~~~~~g~g  254 (398)
T 2dph_A          187 SHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERL----KLLSDA---G--FETI--DLRNSAPLRDQIDQILGKPE  254 (398)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHH----HHHHTT---T--CEEE--ETTSSSCHHHHHHHHHSSSC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHH----HHHHHc---C--CcEE--cCCCcchHHHHHHHHhCCCC
Confidence            79999996 9999999888888899 899998654332    222322   2  2333  4333    344555443237


Q ss_pred             CcEEEEccccc
Q 022471          146 FDAVMHFAAVA  156 (296)
Q Consensus       146 ~D~vi~~Ag~~  156 (296)
                      +|++|.++|..
T Consensus       255 ~Dvvid~~g~~  265 (398)
T 2dph_A          255 VDCGVDAVGFE  265 (398)
T ss_dssp             EEEEEECSCTT
T ss_pred             CCEEEECCCCc
Confidence            99999999853

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.57  E-value=0.0025  Score=56.72  Aligned_cols=74  Identities=15%  Similarity=0.091  Sum_probs=47.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH---HHHHHHhhcCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAF  146 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~  146 (296)
                      .+|+|+|+ |+||...++.+...|+ +|+++++++.+    .+.++++.   .. ..  .|..+.   +.+.++....++
T Consensus       168 ~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~----~~~~~~lG---a~-~v--i~~~~~~~~~~v~~~t~g~g~  236 (352)
T 3fpc_A          168 DTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHC----CDIALEYG---AT-DI--INYKNGDIVEQILKATDGKGV  236 (352)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHH----HHHHHHHT---CC-EE--ECGGGSCHHHHHHHHTTTCCE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHH----HHHHHHhC---Cc-eE--EcCCCcCHHHHHHHHcCCCCC
Confidence            78999985 9999999988888899 79988754322    22333331   11 22  233322   334444433479


Q ss_pred             cEEEEcccc
Q 022471          147 DAVMHFAAV  155 (296)
Q Consensus       147 D~vi~~Ag~  155 (296)
                      |++|.++|.
T Consensus       237 D~v~d~~g~  245 (352)
T 3fpc_A          237 DKVVIAGGD  245 (352)
T ss_dssp             EEEEECSSC
T ss_pred             CEEEECCCC
Confidence            999999874

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.57  E-value=0.0087  Score=53.66  Aligned_cols=73  Identities=14%  Similarity=0.142  Sum_probs=47.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC-----HHHHHHHhhcC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-----AKAVNKFFSEN  144 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-----~~~v~~~~~~~  144 (296)
                      .+|+|+|+ |+||...++.+...|+ +|+++++++.+.+    .++++   +.. ..  .|..+     .+.+.++.. +
T Consensus       197 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~----~a~~l---Ga~-~v--i~~~~~~~~~~~~v~~~~~-~  264 (376)
T 1e3i_A          197 STCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFP----KAKAL---GAT-DC--LNPRELDKPVQDVITELTA-G  264 (376)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH----HHHHT---TCS-EE--ECGGGCSSCHHHHHHHHHT-S
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH----HHHHh---CCc-EE--EccccccchHHHHHHHHhC-C
Confidence            79999996 9999999998888999 7888876544332    22332   111 11  23332     233444433 4


Q ss_pred             CCcEEEEcccc
Q 022471          145 AFDAVMHFAAV  155 (296)
Q Consensus       145 ~~D~vi~~Ag~  155 (296)
                      ++|++|.++|.
T Consensus       265 g~Dvvid~~G~  275 (376)
T 1e3i_A          265 GVDYSLDCAGT  275 (376)
T ss_dssp             CBSEEEESSCC
T ss_pred             CccEEEECCCC
Confidence            89999999973

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.56  E-value=0.023  Score=47.86  Aligned_cols=157  Identities=14%  Similarity=0.169  Sum_probs=88.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhh---cCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS---ENAF  146 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~---~~~~  146 (296)
                      ++|.|.|++|.+|+.+++.+.+. +++++.+......   ..+.+.      .... +..|++.++...+.+.   +.++
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~d---l~~~~~------~~~D-vvIDfT~p~a~~~~~~~a~~~g~   70 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDP---LSLLTD------GNTE-VVIDFTHPDVVMGNLEFLIDNGI   70 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCC---THHHHH------TTCC-EEEECSCTTTHHHHHHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCC---HHHHhc------cCCc-EEEEccChHHHHHHHHHHHHcCC
Confidence            47999999999999999999876 8998866533222   222211      0122 4678888776655442   2678


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccC-----------C--CCCCCCCCCC
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGE-----------P--EKMPITEETP  213 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~-----------~--~~~~~~e~~~  213 (296)
                      ++|+-..|..        . +..       ..+.+++++.....+++.+..+. |.           .  +...+.|...
T Consensus        71 ~~VigTTG~~--------~-e~~-------~~l~~aa~~~~~~~vv~a~N~si-Gv~ll~~l~~~aa~~~~dieIiE~HH  133 (245)
T 1p9l_A           71 HAVVGTTGFT--------A-ERF-------QQVESWLVAKPNTSVLIAPNFAI-GAVLSMHFAKQAARFFDSAEVIELHH  133 (245)
T ss_dssp             EEEECCCCCC--------H-HHH-------HHHHHHHHTSTTCEEEECSCCCH-HHHHHHHHHHHHGGGCSEEEEEEEEC
T ss_pred             CEEEcCCCCC--------H-HHH-------HHHHHHHHhCCCCCEEEECCccH-HHHHHHHHHHHHHhhcCCEEEEECcc
Confidence            9988665521        1 111       22444444441235666555322 10           0  1111222222


Q ss_pred             C-CCCChHHHHHHHHHHHHHHhhh-------------------cCCCcEEEEecCeeecCC
Q 022471          214 Q-APINPYGKAKKMAEDIILDFSK-------------------NSDMAVMILRYFNVIGSD  254 (296)
Q Consensus       214 ~-~~~~~Y~~sK~~~e~~~~~~~~-------------------~~gi~~~~lrpg~v~Gp~  254 (296)
                      . .-..|-|.++..+|........                   ..+|.+..+|-|.|.|.+
T Consensus       134 ~~K~DaPSGTA~~lae~i~~~~~~~~~~~~~~~~~~~g~r~~~~~~i~i~s~R~g~ivg~h  194 (245)
T 1p9l_A          134 PHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQ  194 (245)
T ss_dssp             TTCCSSSCHHHHHHHHHHHHHTTTSCCCCCCCCSCCTTTTCEEETTEEEEEEECTTCCEEE
T ss_pred             cCCCCCCCHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCcceEEEEECCCCCeEE
Confidence            1 2234457777777777654220                   036889999999988865

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=96.56  E-value=0.011  Score=52.49  Aligned_cols=92  Identities=20%  Similarity=0.218  Sum_probs=54.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC---eEEEEe-cCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY---RVTIVD-NLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~---~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (296)
                      ++|.|.||+|.||+++++.|.++++   +++.+. ++... ..    +. .  .+..+.+...|   .+   . +  .++
T Consensus         7 ~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g-~~----~~-~--~g~~i~~~~~~---~~---~-~--~~~   69 (340)
T 2hjs_A            7 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAG-QR----MG-F--AESSLRVGDVD---SF---D-F--SSV   69 (340)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTT-CE----EE-E--TTEEEECEEGG---GC---C-G--GGC
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCC-Cc----cc-c--CCcceEEecCC---HH---H-h--cCC
Confidence            6899999999999999999997765   445443 22111 00    00 0  01112221112   11   1 2  368


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccc
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCA  198 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~  198 (296)
                      |+||-+.|..                  .+..+++.+.+.|. ++|-+|+..
T Consensus        70 DvV~~a~g~~------------------~s~~~a~~~~~aG~-kvId~Sa~~  102 (340)
T 2hjs_A           70 GLAFFAAAAE------------------VSRAHAERARAAGC-SVIDLSGAL  102 (340)
T ss_dssp             SEEEECSCHH------------------HHHHHHHHHHHTTC-EEEETTCTT
T ss_pred             CEEEEcCCcH------------------HHHHHHHHHHHCCC-EEEEeCCCC
Confidence            9999988631                  24567777777776 577777754

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=96.51  E-value=0.01  Score=53.14  Aligned_cols=69  Identities=19%  Similarity=0.288  Sum_probs=51.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      ||+|+|+|+ |.+|+.+++++.+.|++|++++..+....  ..    .    .. .++..|..|.+.+.+++  .++|.|
T Consensus         1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~--~~----~----~~-~~~~~~~~d~~~l~~~~--~~~d~v   66 (380)
T 3ax6_A            1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSPA--GQ----V----AD-EQIVAGFFDSERIEDLV--KGSDVT   66 (380)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTT--GG----G----SS-EEEECCTTCHHHHHHHH--HTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCch--hh----h----Cc-eEEECCCCCHHHHHHHH--hcCCEE
Confidence            589999997 78999999999999999999985432211  11    1    11 34578999999999888  468998


Q ss_pred             EEc
Q 022471          150 MHF  152 (296)
Q Consensus       150 i~~  152 (296)
                      +..
T Consensus        67 ~~~   69 (380)
T 3ax6_A           67 TYD   69 (380)
T ss_dssp             EES
T ss_pred             Eec
Confidence            863

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.51  E-value=0.0042  Score=55.67  Aligned_cols=72  Identities=14%  Similarity=0.155  Sum_probs=46.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC---HHHHHHHhhcCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD---AKAVNKFFSENAF  146 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d---~~~v~~~~~~~~~  146 (296)
                      ++|||+|+ |+||...++.+...|+ +|+++++++.+.    +.++++.   .. ..+  |..+   .+.+.++.. +++
T Consensus       192 ~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~----~~a~~lG---a~-~vi--~~~~~~~~~~~~~~~~-gg~  259 (371)
T 1f8f_A          192 SSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRL----ELAKQLG---AT-HVI--NSKTQDPVAAIKEITD-GGV  259 (371)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHH----HHHHHHT---CS-EEE--ETTTSCHHHHHHHHTT-SCE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHH----HHHHHcC---CC-EEe--cCCccCHHHHHHHhcC-CCC
Confidence            79999995 9999999988888899 688888654332    2233331   11 222  3332   234444433 379


Q ss_pred             cEEEEccc
Q 022471          147 DAVMHFAA  154 (296)
Q Consensus       147 D~vi~~Ag  154 (296)
                      |++|+++|
T Consensus       260 D~vid~~g  267 (371)
T 1f8f_A          260 NFALESTG  267 (371)
T ss_dssp             EEEEECSC
T ss_pred             cEEEECCC
Confidence            99999997

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.51  E-value=0.005  Score=55.22  Aligned_cols=74  Identities=19%  Similarity=0.218  Sum_probs=47.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhh-----cC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS-----EN  144 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~-----~~  144 (296)
                      .+|||+|+ |++|...++.+...|+ +|+++++++.+    .+.++++.   .. .  ..|..+.+..+.+.+     .+
T Consensus       184 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~----~~~a~~lG---a~-~--vi~~~~~~~~~~i~~~~~~~~g  252 (370)
T 4ej6_A          184 STVAILGG-GVIGLLTVQLARLAGATTVILSTRQATK----RRLAEEVG---AT-A--TVDPSAGDVVEAIAGPVGLVPG  252 (370)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHH----HHHHHHHT---CS-E--EECTTSSCHHHHHHSTTSSSTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHH----HHHHHHcC---CC-E--EECCCCcCHHHHHHhhhhccCC
Confidence            79999998 9999999998888999 78887654322    22333331   11 1  234444332333222     14


Q ss_pred             CCcEEEEcccc
Q 022471          145 AFDAVMHFAAV  155 (296)
Q Consensus       145 ~~D~vi~~Ag~  155 (296)
                      ++|++|.++|.
T Consensus       253 g~Dvvid~~G~  263 (370)
T 4ej6_A          253 GVDVVIECAGV  263 (370)
T ss_dssp             CEEEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.49  E-value=0.0077  Score=53.89  Aligned_cols=73  Identities=14%  Similarity=0.063  Sum_probs=47.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC-----HHHHHHHhhcC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-----AKAVNKFFSEN  144 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-----~~~v~~~~~~~  144 (296)
                      .+|||+|+ |+||...++.+...|+ +|+++++++.+.+    .++++   +.. ..  .|..+     .+.+.++.. +
T Consensus       192 ~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~----~~~~l---Ga~-~v--i~~~~~~~~~~~~v~~~~~-~  259 (373)
T 2fzw_A          192 SVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFA----RAKEF---GAT-EC--INPQDFSKPIQEVLIEMTD-G  259 (373)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH----HHHHH---TCS-EE--ECGGGCSSCHHHHHHHHTT-S
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH----HHHHc---CCc-eE--eccccccccHHHHHHHHhC-C
Confidence            79999996 9999999988888899 7888876544332    22333   111 11  23332     233444333 4


Q ss_pred             CCcEEEEcccc
Q 022471          145 AFDAVMHFAAV  155 (296)
Q Consensus       145 ~~D~vi~~Ag~  155 (296)
                      ++|++|+++|.
T Consensus       260 g~D~vid~~g~  270 (373)
T 2fzw_A          260 GVDYSFECIGN  270 (373)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCc
Confidence            79999999973

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.48  E-value=0.0056  Score=54.51  Aligned_cols=73  Identities=16%  Similarity=0.318  Sum_probs=47.0

Q ss_pred             cEEEEEcCCChhhHHH-HHHH-HhCCCe-EEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC--HHHHHHHhhcCC
Q 022471           71 THVLVTGGAGYIGSHA-ALRL-LKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD--AKAVNKFFSENA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~l-a~~L-~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~  145 (296)
                      .+|+|+|| |++|... ++.+ ...|++ |+++++++.... ..+.++++     ....+  |..+  ..++.++ . ++
T Consensus       174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~-~~~~~~~l-----Ga~~v--~~~~~~~~~i~~~-~-gg  242 (357)
T 2b5w_A          174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDP-TIDIIEEL-----DATYV--DSRQTPVEDVPDV-Y-EQ  242 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCH-HHHHHHHT-----TCEEE--ETTTSCGGGHHHH-S-CC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHH-HHHHHHHc-----CCccc--CCCccCHHHHHHh-C-CC
Confidence            78999999 9999999 7777 667997 999987554100 11222332     12333  4433  2225554 3 48


Q ss_pred             CcEEEEccc
Q 022471          146 FDAVMHFAA  154 (296)
Q Consensus       146 ~D~vi~~Ag  154 (296)
                      +|++|+++|
T Consensus       243 ~Dvvid~~g  251 (357)
T 2b5w_A          243 MDFIYEATG  251 (357)
T ss_dssp             EEEEEECSC
T ss_pred             CCEEEECCC
Confidence            999999987

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.47  E-value=0.0045  Score=54.83  Aligned_cols=77  Identities=21%  Similarity=0.205  Sum_probs=48.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +.+|+|+|+ |++|...++.+... |.+|+++++++.+.    +.++++   +.. ..+..+-...+.+.++....++|+
T Consensus       172 g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~----~~~~~l---Ga~-~~i~~~~~~~~~v~~~t~g~g~d~  242 (345)
T 3jv7_A          172 GSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRL----ALAREV---GAD-AAVKSGAGAADAIRELTGGQGATA  242 (345)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHH----HHHHHT---TCS-EEEECSTTHHHHHHHHHGGGCEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHH----HHHHHc---CCC-EEEcCCCcHHHHHHHHhCCCCCeE
Confidence            379999998 99999988877776 78999998654332    233333   111 222222122344555543348999


Q ss_pred             EEEcccc
Q 022471          149 VMHFAAV  155 (296)
Q Consensus       149 vi~~Ag~  155 (296)
                      +|.++|.
T Consensus       243 v~d~~G~  249 (345)
T 3jv7_A          243 VFDFVGA  249 (345)
T ss_dssp             EEESSCC
T ss_pred             EEECCCC
Confidence            9999983

>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*

Probab=96.41  E-value=0.015  Score=52.18  Aligned_cols=72  Identities=15%  Similarity=0.205  Sum_probs=53.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +|+|+|+|+ |.+|..+++++.+.|++|++++..+....  ..    .    . -.++..|..|.+.+.+++++.++|+|
T Consensus        11 ~~~ili~g~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~--~~----~----~-d~~~~~~~~d~~~l~~~~~~~~~d~v   78 (391)
T 1kjq_A           11 ATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPA--MH----V----A-HRSHVINMLDGDALRRVVELEKPHYI   78 (391)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGG--GG----G----S-SEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEECCCCCch--hh----h----c-cceEECCCCCHHHHHHHHHHcCCCEE
Confidence            489999987 68999999999999999999986443211  11    1    1 13456788899999888876689999


Q ss_pred             EEcc
Q 022471          150 MHFA  153 (296)
Q Consensus       150 i~~A  153 (296)
                      +..-
T Consensus        79 ~~~~   82 (391)
T 1kjq_A           79 VPEI   82 (391)
T ss_dssp             EECS
T ss_pred             EECC
Confidence            8743

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=96.41  E-value=0.011  Score=52.64  Aligned_cols=32  Identities=22%  Similarity=0.338  Sum_probs=27.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCC-CeEEEEec
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDN  102 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~r  102 (296)
                      ++|.|.||+|.||+.+++.|.+++ .+|+.+.+
T Consensus         9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~   41 (354)
T 1ys4_A            9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAA   41 (354)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred             ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEc
Confidence            689999999999999999998875 57777754

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.40  E-value=0.011  Score=51.75  Aligned_cols=79  Identities=15%  Similarity=-0.000  Sum_probs=52.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceE-EEEccCCCHHHHHHHhhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQ-FIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +++|+|.|++.-+|+.+++.|+..|++|++++|+........+.+.      ...+ ......++.+++.+.+  .+.|+
T Consensus       177 gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la------~~~~~~t~~~~t~~~~L~e~l--~~ADI  248 (320)
T 1edz_A          177 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLK------LNKHHVEDLGEYSEDLLKKCS--LDSDV  248 (320)
T ss_dssp             TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSS------CCCCEEEEEEECCHHHHHHHH--HHCSE
T ss_pred             CCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHh------hhcccccccccccHhHHHHHh--ccCCE
Confidence            3999999998889999999999999999999875322221111111      1111 1111224457788888  45799


Q ss_pred             EEEccccc
Q 022471          149 VMHFAAVA  156 (296)
Q Consensus       149 vi~~Ag~~  156 (296)
                      ||.+.|..
T Consensus       249 VIsAtg~p  256 (320)
T 1edz_A          249 VITGVPSE  256 (320)
T ss_dssp             EEECCCCT
T ss_pred             EEECCCCC
Confidence            99998864

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.40  E-value=0.0089  Score=53.51  Aligned_cols=73  Identities=16%  Similarity=0.067  Sum_probs=47.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC-----HHHHHHHhhcC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-----AKAVNKFFSEN  144 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-----~~~v~~~~~~~  144 (296)
                      .+|+|+|+ |+||...++.+...|+ +|+++++++.+.+    .++++   +.. +.  .|..+     .+.+.++.. +
T Consensus       193 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~----~a~~l---Ga~-~v--i~~~~~~~~~~~~i~~~t~-g  260 (373)
T 1p0f_A          193 STCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFP----KAIEL---GAT-EC--LNPKDYDKPIYEVICEKTN-G  260 (373)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH----HHHHT---TCS-EE--ECGGGCSSCHHHHHHHHTT-S
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHH----HHHHc---CCc-EE--EecccccchHHHHHHHHhC-C
Confidence            79999995 9999999988888899 7888876543322    22332   111 12  23332     233444433 4


Q ss_pred             CCcEEEEcccc
Q 022471          145 AFDAVMHFAAV  155 (296)
Q Consensus       145 ~~D~vi~~Ag~  155 (296)
                      ++|++|.++|.
T Consensus       261 g~Dvvid~~g~  271 (373)
T 1p0f_A          261 GVDYAVECAGR  271 (373)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.39  E-value=0.011  Score=53.43  Aligned_cols=75  Identities=19%  Similarity=0.208  Sum_probs=51.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEcc----------------CCCH
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD----------------LGDA  134 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D----------------l~d~  134 (296)
                      .+|+|+|+ |-+|...++.+...|++|+++++++...+.+.    +.   +  ..++..+                +++.
T Consensus       191 ~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~----~~---G--~~~~~~~~~~~~d~~~~~~ya~e~s~~  260 (405)
T 4dio_A          191 AKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA----SL---G--AKFIAVEDEEFKAAETAGGYAKEMSGE  260 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH----HT---T--CEECCCCC-----------------CH
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH----Hc---C--Cceeecccccccccccccchhhhcchh
Confidence            78999998 99999999999999999999997664433222    21   1  1122211                2332


Q ss_pred             ------HHHHHHhhcCCCcEEEEcccccC
Q 022471          135 ------KAVNKFFSENAFDAVMHFAAVAY  157 (296)
Q Consensus       135 ------~~v~~~~~~~~~D~vi~~Ag~~~  157 (296)
                            +.+.+++  .+.|+||+++.+..
T Consensus       261 ~~~~~~~~l~e~l--~~aDVVI~tvlipg  287 (405)
T 4dio_A          261 YQVKQAALVAEHI--AKQDIVITTALIPG  287 (405)
T ss_dssp             HHHHHHHHHHHHH--HTCSEEEECCCCSS
T ss_pred             hhhhhHhHHHHHh--cCCCEEEECCcCCC
Confidence                  4666766  56899999986543

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.39  E-value=0.019  Score=53.13  Aligned_cols=103  Identities=17%  Similarity=0.300  Sum_probs=69.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      ++|+|.|| |-||..+|+.|- ++++|.++.++..+.+.+.+   ++    ++..++.+|-+|.+-+++.=- ...|++|
T Consensus       236 ~~v~I~Gg-G~ig~~lA~~L~-~~~~v~iIE~d~~r~~~la~---~l----~~~~Vi~GD~td~~~L~ee~i-~~~D~~i  305 (461)
T 4g65_A          236 RRIMIVGG-GNIGASLAKRLE-QTYSVKLIERNLQRAEKLSE---EL----ENTIVFCGDAADQELLTEENI-DQVDVFI  305 (461)
T ss_dssp             CEEEEECC-SHHHHHHHHHHT-TTSEEEEEESCHHHHHHHHH---HC----TTSEEEESCTTCHHHHHHTTG-GGCSEEE
T ss_pred             cEEEEEcc-hHHHHHHHHHhh-hcCceEEEecCHHHHHHHHH---HC----CCceEEeccccchhhHhhcCc-hhhcEEE
Confidence            78999985 899999999984 56899998754443333332   22    457889999999988876522 4689999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccc
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATY  200 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~  200 (296)
                      -..+         +.    +.|+..+.    .+++.|++++|-.-.-..|
T Consensus       306 a~T~---------~D----e~Ni~~~l----lAk~~gv~kvIa~vn~~~~  338 (461)
T 4g65_A          306 ALTN---------ED----ETNIMSAM----LAKRMGAKKVMVLIQRGAY  338 (461)
T ss_dssp             ECCS---------CH----HHHHHHHH----HHHHTTCSEEEEECSCHHH
T ss_pred             Eccc---------Cc----HHHHHHHH----HHHHcCCccccccccccch
Confidence            6653         11    34554433    3456788888775553333

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.39  E-value=0.0082  Score=54.25  Aligned_cols=74  Identities=19%  Similarity=0.162  Sum_probs=48.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC----HHHHHHHhhcCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD----AKAVNKFFSENA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d----~~~v~~~~~~~~  145 (296)
                      .+|+|+|+ |+||...++.+...|+ +|+++++++.+.    +.++++   +  +..  .|..+    .+.+.++....+
T Consensus       187 ~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~----~~a~~l---G--a~~--i~~~~~~~~~~~v~~~t~g~g  254 (398)
T 1kol_A          187 STVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARL----AHAKAQ---G--FEI--ADLSLDTPLHEQIAALLGEPE  254 (398)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHH----HHHHHT---T--CEE--EETTSSSCHHHHHHHHHSSSC
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHH----HHHHHc---C--CcE--EccCCcchHHHHHHHHhCCCC
Confidence            79999995 9999999988888899 688887644322    223333   2  232  33333    234544443247


Q ss_pred             CcEEEEccccc
Q 022471          146 FDAVMHFAAVA  156 (296)
Q Consensus       146 ~D~vi~~Ag~~  156 (296)
                      +|++|.++|..
T Consensus       255 ~Dvvid~~G~~  265 (398)
T 1kol_A          255 VDCAVDAVGFE  265 (398)
T ss_dssp             EEEEEECCCTT
T ss_pred             CCEEEECCCCc
Confidence            99999999853

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.36  E-value=0.0014  Score=55.83  Aligned_cols=66  Identities=12%  Similarity=0.156  Sum_probs=44.6

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      +++|.|+ |+.|++++..|++.|+ +|++++|+..+.+++.          ..+...  +   .+++.+.+  .+.|+||
T Consensus       110 ~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la----------~~~~~~--~---~~~~~~~~--~~aDiVI  171 (253)
T 3u62_A          110 PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALD----------FPVKIF--S---LDQLDEVV--KKAKSLF  171 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCC----------SSCEEE--E---GGGHHHHH--HTCSEEE
T ss_pred             eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH----------HHcccC--C---HHHHHhhh--cCCCEEE
Confidence            7999996 9999999999999998 8999987643222111          111111  1   23344555  3689999


Q ss_pred             Ecccc
Q 022471          151 HFAAV  155 (296)
Q Consensus       151 ~~Ag~  155 (296)
                      |+...
T Consensus       172 natp~  176 (253)
T 3u62_A          172 NTTSV  176 (253)
T ss_dssp             ECSST
T ss_pred             ECCCC
Confidence            98754

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=96.34  E-value=0.0052  Score=53.69  Aligned_cols=67  Identities=16%  Similarity=0.220  Sum_probs=44.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +.+|||+|| |++|...++.+...|++|++++ ++.+.+.    ++++   +  ...+. |  |   .+++  ..++|++
T Consensus       143 g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~----~~~l---G--a~~v~-~--d---~~~v--~~g~Dvv  203 (315)
T 3goh_A          143 QREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQAL----AAKR---G--VRHLY-R--E---PSQV--TQKYFAI  203 (315)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHH----HHHH---T--EEEEE-S--S---GGGC--CSCEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHH----HHHc---C--CCEEE-c--C---HHHh--CCCccEE
Confidence            389999999 9999999988888899999988 5444332    2332   1  22222 3  2   2222  3689999


Q ss_pred             EEcccc
Q 022471          150 MHFAAV  155 (296)
Q Consensus       150 i~~Ag~  155 (296)
                      |.++|.
T Consensus       204 ~d~~g~  209 (315)
T 3goh_A          204 FDAVNS  209 (315)
T ss_dssp             ECC---
T ss_pred             EECCCc
Confidence            999874

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=96.34  E-value=0.02  Score=50.72  Aligned_cols=94  Identities=12%  Similarity=0.087  Sum_probs=56.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCC---CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDS---YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (296)
                      |++|.|.||+|.||+.+++.|.+++   .+++.+... +...+.   +. .  .+..+.+...|   .+    .+  .++
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~-~~~G~~---~~-~--~~~~i~~~~~~---~~----~~--~~v   66 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASE-RSEGKT---YR-F--NGKTVRVQNVE---EF----DW--SQV   66 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECT-TTTTCE---EE-E--TTEEEEEEEGG---GC----CG--GGC
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECC-CCCCCc---ee-e--cCceeEEecCC---hH----Hh--cCC
Confidence            4789999999999999999999874   356665421 111000   00 0  01122332222   11    22  368


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccc
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCA  198 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~  198 (296)
                      |+||-|.|..                  .+...++.+.+.|. ++|-.|+..
T Consensus        67 DvVf~a~g~~------------------~s~~~a~~~~~~G~-~vId~s~~~   99 (336)
T 2r00_A           67 HIALFSAGGE------------------LSAKWAPIAAEAGV-VVIDNTSHF   99 (336)
T ss_dssp             SEEEECSCHH------------------HHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             CEEEECCCch------------------HHHHHHHHHHHcCC-EEEEcCCcc
Confidence            9999988632                  24556777777775 777777753

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=96.32  E-value=0.021  Score=52.64  Aligned_cols=94  Identities=13%  Similarity=0.253  Sum_probs=60.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCC-C---eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCC--CH-HHHHHHhhc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDS-Y---RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG--DA-KAVNKFFSE  143 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G-~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--d~-~~v~~~~~~  143 (296)
                      ++|+|.| .|+||+.+++.|+++. .   +|++++...... +..+   ..     .+.+...+++  |. +.+.+++++
T Consensus        14 ~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~-~~~~---~~-----g~~~~~~~Vdadnv~~~l~aLl~~   83 (480)
T 2ph5_A           14 NRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKV-DVAQ---QY-----GVSFKLQQITPQNYLEVIGSTLEE   83 (480)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSC-CHHH---HH-----TCEEEECCCCTTTHHHHTGGGCCT
T ss_pred             CCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhh-hHHh---hc-----CCceeEEeccchhHHHHHHHHhcC
Confidence            6799999 7999999999999974 4   688887544332 2221   11     2345555554  44 335667753


Q ss_pred             CCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEc
Q 022471          144 NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSS  195 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~S  195 (296)
                        .|+|||.+- ..                 ....++++|.+.|+ .+|-++
T Consensus        84 --~DvVIN~s~-~~-----------------~~l~Im~acleaGv-~YlDTa  114 (480)
T 2ph5_A           84 --NDFLIDVSI-GI-----------------SSLALIILCNQKGA-LYINAA  114 (480)
T ss_dssp             --TCEEEECCS-SS-----------------CHHHHHHHHHHHTC-EEEESS
T ss_pred             --CCEEEECCc-cc-----------------cCHHHHHHHHHcCC-CEEECC
Confidence              499998542 11                 13458889999885 444443

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.31  E-value=0.0063  Score=55.27  Aligned_cols=36  Identities=22%  Similarity=0.106  Sum_probs=31.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG  106 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~  106 (296)
                      +++|+|+|+ |.+|..+++.+...|++|++++++...
T Consensus       172 g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~  207 (401)
T 1x13_A          172 PAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEV  207 (401)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence            389999996 999999999999999999999876543

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=96.29  E-value=0.036  Score=49.53  Aligned_cols=93  Identities=13%  Similarity=0.178  Sum_probs=54.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC---eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY---RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      ++|.|.||||.+|.++.+.|.++++   ++..+.-.........     .  .+....+...|.   +    .+  .++|
T Consensus         3 ~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~-----~--~~~~~~~~~~~~---~----~~--~~~D   66 (366)
T 3pwk_A            3 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLK-----F--KDQDITIEETTE---T----AF--EGVD   66 (366)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEE-----E--TTEEEEEEECCT---T----TT--TTCS
T ss_pred             cEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcce-----e--cCCCceEeeCCH---H----Hh--cCCC
Confidence            6899999999999999999998766   3444432111111110     0  011222222221   1    12  4789


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccc
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCA  198 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~  198 (296)
                      +||-+++.                  ..+...++.+.+.|. ++|=.|+..
T Consensus        67 vvf~a~~~------------------~~s~~~a~~~~~~G~-~vIDlSa~~   98 (366)
T 3pwk_A           67 IALFSAGS------------------STSAKYAPYAVKAGV-VVVDNTSYF   98 (366)
T ss_dssp             EEEECSCH------------------HHHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             EEEECCCh------------------HhHHHHHHHHHHCCC-EEEEcCCcc
Confidence            99998862                  124556666667775 677777754

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=96.26  E-value=0.0072  Score=51.85  Aligned_cols=34  Identities=15%  Similarity=0.238  Sum_probs=28.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhC-CCeEEEE-ecC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKD-SYRVTIV-DNL  103 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~-G~~V~~~-~r~  103 (296)
                      |++|.|+|++|.+|+.+++.+.+. +++++.+ +|+
T Consensus         7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~   42 (272)
T 4f3y_A            7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRT   42 (272)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCT
T ss_pred             ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEec
Confidence            479999999999999999999875 6677764 554

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=96.24  E-value=0.002  Score=56.04  Aligned_cols=34  Identities=24%  Similarity=0.479  Sum_probs=30.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      ||+|.|.|+ |.+|..++..|++.|++|++++|++
T Consensus         3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~   36 (316)
T 2ew2_A            3 AMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWP   36 (316)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCH
Confidence            478999996 9999999999999999999998754

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.22  E-value=0.0035  Score=54.61  Aligned_cols=69  Identities=16%  Similarity=0.117  Sum_probs=47.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +++|+|.|+ |.||+.+++.|...|++|++.+|+..+.    +.+.+.     .+..+     +.+++++++  .+.|+|
T Consensus       157 g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~----~~~~~~-----g~~~~-----~~~~l~~~l--~~aDvV  219 (300)
T 2rir_A          157 GSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHL----ARITEM-----GLVPF-----HTDELKEHV--KDIDIC  219 (300)
T ss_dssp             TSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHH----HHHHHT-----TCEEE-----EGGGHHHHS--TTCSEE
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHH----HHHHHC-----CCeEE-----chhhHHHHh--hCCCEE
Confidence            389999996 9999999999999999999998754221    111111     12222     123456666  568999


Q ss_pred             EEcccc
Q 022471          150 MHFAAV  155 (296)
Q Consensus       150 i~~Ag~  155 (296)
                      |++...
T Consensus       220 i~~~p~  225 (300)
T 2rir_A          220 INTIPS  225 (300)
T ss_dssp             EECCSS
T ss_pred             EECCCh
Confidence            998764

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=96.22  E-value=0.0084  Score=53.59  Aligned_cols=97  Identities=18%  Similarity=0.232  Sum_probs=57.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      ++|.|.||+|.||+.+++.|.++.. +++.+........+.......+.   ..+   ..|+.-.+  ++.+  .++|+|
T Consensus        17 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~---~~v---~~dl~~~~--~~~~--~~vDvV   86 (359)
T 1xyg_A           17 IRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLR---AQK---LPTLVSVK--DADF--STVDAV   86 (359)
T ss_dssp             EEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGT---TSC---CCCCBCGG--GCCG--GGCSEE
T ss_pred             cEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhc---Ccc---cccceecc--hhHh--cCCCEE
Confidence            6899999999999999999998764 77776543222211211111111   111   13333222  3333  379999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccc
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTC  197 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~  197 (296)
                      |.|++...                  +...++.+ +.|. ++|-.|+.
T Consensus        87 f~atp~~~------------------s~~~a~~~-~aG~-~VId~sa~  114 (359)
T 1xyg_A           87 FCCLPHGT------------------TQEIIKEL-PTAL-KIVDLSAD  114 (359)
T ss_dssp             EECCCTTT------------------HHHHHHTS-CTTC-EEEECSST
T ss_pred             EEcCCchh------------------HHHHHHHH-hCCC-EEEECCcc
Confidence            99986432                  24456666 5554 78878874

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=96.20  E-value=0.01  Score=54.44  Aligned_cols=77  Identities=18%  Similarity=0.312  Sum_probs=52.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCC-------------------CcchhhhhhhhhCCCCCceEEEEcc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSR-------------------GNIGAVKVLQELFPEPGRLQFIYAD  130 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~D  130 (296)
                      .+|+|.|+ ||+|.++++.|+..|. +++++|...-                   +.+.+.+.++++.+. .++..+..+
T Consensus        41 ~~VlvvG~-GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~-v~v~~~~~~  118 (434)
T 1tt5_B           41 CKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPN-CNVVPHFNK  118 (434)
T ss_dssp             CCEEEECS-STHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTT-CCCEEEESC
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCC-CEEEEEecc
Confidence            78999996 8999999999999997 7888874321                   112233344444433 466777777


Q ss_pred             CCCHHHHHHHhhcCCCcEEEEcc
Q 022471          131 LGDAKAVNKFFSENAFDAVMHFA  153 (296)
Q Consensus       131 l~d~~~v~~~~~~~~~D~vi~~A  153 (296)
                      +.+..  .+++  .++|+||.+.
T Consensus       119 i~~~~--~~~~--~~~DlVi~~~  137 (434)
T 1tt5_B          119 IQDFN--DTFY--RQFHIIVCGL  137 (434)
T ss_dssp             GGGBC--HHHH--TTCSEEEECC
T ss_pred             cchhh--HHHh--cCCCEEEECC
Confidence            66533  3455  5689999874

>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*

Probab=96.15  E-value=0.016  Score=52.91  Aligned_cols=73  Identities=16%  Similarity=0.237  Sum_probs=54.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +|+|+|+|+ |.+|..+++++.+.|++|++++..+...  ...    .    . -..+..|..|.+.+.+++++.++|+|
T Consensus        19 ~~~ili~g~-g~~g~~~~~a~~~~G~~v~~v~~~~~~~--~~~----~----a-d~~~~~~~~d~~~l~~~~~~~~~d~V   86 (433)
T 2dwc_A           19 AQKILLLGS-GELGKEIAIEAQRLGVEVVAVDRYANAP--AMQ----V----A-HRSYVGNMMDKDFLWSVVEREKPDAI   86 (433)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHHTTCEEEEEESSTTCH--HHH----H----S-SEEEESCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCh--hhh----h----c-ceEEECCCCCHHHHHHHHHHcCCCEE
Confidence            379999987 7899999999999999999998543321  111    1    0 13456788999999888876689999


Q ss_pred             EEccc
Q 022471          150 MHFAA  154 (296)
Q Consensus       150 i~~Ag  154 (296)
                      +..-+
T Consensus        87 ~~~~e   91 (433)
T 2dwc_A           87 IPEIE   91 (433)
T ss_dssp             EECSS
T ss_pred             EECcc
Confidence            87543

>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*

Probab=96.15  E-value=0.028  Score=49.97  Aligned_cols=70  Identities=21%  Similarity=0.277  Sum_probs=48.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCC-CHHHHHHHhhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG-DAKAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~v~~~~~~~~~D~  148 (296)
                      ||+|+|.|| |..|..+++.+.+.|++|++++.++.....      ..    . -.++..|.. |.+.+..+.  .++|+
T Consensus         1 MK~I~ilGg-g~~g~~~~~~Ak~~G~~vv~vd~~~~~~~~------~~----a-D~~~~~~~~~d~~~~~~~~--~~~D~   66 (363)
T 4ffl_A            1 MKTICLVGG-KLQGFEAAYLSKKAGMKVVLVDKNPQALIR------NY----A-DEFYCFDVIKEPEKLLELS--KRVDA   66 (363)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTT------TT----S-SEEEECCTTTCHHHHHHHH--TSSSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCChhH------hh----C-CEEEECCCCcCHHHHHHHh--cCCCE
Confidence            799999995 789999999999999999999865432210      00    1 134455654 555555544  57998


Q ss_pred             EEEcc
Q 022471          149 VMHFA  153 (296)
Q Consensus       149 vi~~A  153 (296)
                      |+-..
T Consensus        67 v~~~~   71 (363)
T 4ffl_A           67 VLPVN   71 (363)
T ss_dssp             EEECC
T ss_pred             EEECC
Confidence            87543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	296
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	8e-55
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	1e-49
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	5e-47
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	3e-46
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-44
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	2e-42
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	3e-41
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	3e-40
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-39
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	1e-34
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-34
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	9e-32
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	8e-31
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	1e-30
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-30
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	6e-19
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	1e-18
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	1e-16
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	1e-15
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	1e-14
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	3e-13
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	3e-12
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	8e-12
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	1e-11
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	3e-11
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	7e-10
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	1e-09
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	1e-07
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	1e-07
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	1e-07
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	1e-07
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	2e-07
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	2e-07
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	2e-07
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	2e-07
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	2e-07
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	3e-07
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	4e-07
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	4e-07
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	4e-07
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	6e-07
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	7e-07
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	7e-07
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	7e-07
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	8e-07
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	8e-07
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	1e-06
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	1e-06
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	1e-06
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	1e-06
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	1e-06
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	1e-06
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	2e-06
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-06
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	2e-06
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	2e-06
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	2e-06
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	3e-06
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	4e-06
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	6e-06
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	9e-06
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	1e-05
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	1e-05
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	1e-05
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	1e-05
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	3e-05
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	3e-05
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	4e-05
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	6e-05
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	8e-05
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	9e-05
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	1e-04
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	2e-04
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	2e-04
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	2e-04
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	3e-04
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-04
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	6e-04
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	0.001
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	0.001
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	0.002
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	0.003
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	0.003
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	0.003
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	0.003
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	0.003
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	0.004
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	0.004
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	0.004
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	0.004
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	0.004

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score =  179 bits (455), Expect = 8e-55
 Identities = 49/185 (26%), Positives = 77/185 (41%), Gaps = 5/185 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNL-SRGNIGAVKVL-QELFPEPGRLQFIYAD 130
            L+TG  G  GS+ A  LL+  Y V  +    S  N   V  + Q+      +    Y D
Sbjct: 4   ALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGD 63

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           L D   + +   E   D V +  A+++V  S   P          TL +LE++   G++ 
Sbjct: 64  LSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEK 123

Query: 191 ---LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRY 247
                 +ST   YG  +++P  E TP  P +PY  AK  A  I +++ ++  M       
Sbjct: 124 KTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGIL 183

Query: 248 FNVIG 252
           FN   
Sbjct: 184 FNHES 188

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  164 bits (417), Expect = 1e-49
 Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 17/193 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TGGAG++GSH   +L+ D + VT+VDN   G    V+           +     +L 
Sbjct: 4   ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW---------IGHENFELI 54

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   V   + E   D + H A+ A       +P+K     T  TL +L    R G   L+
Sbjct: 55  NHDVVEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLL 111

Query: 193 YSSTCATYGEPEKMPITEE-----TPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRY 247
            +ST   YG+PE  P +E+      P  P   Y + K++AE +   + K   + V + R 
Sbjct: 112 LASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARI 171

Query: 248 FNVIGSDPEGRLG 260
           FN  G       G
Sbjct: 172 FNTFGPRMHMNDG 184

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score =  159 bits (403), Expect = 5e-47
 Identities = 47/200 (23%), Positives = 86/200 (43%), Gaps = 23/200 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTI-VDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           +L+TGGAG+IGS     ++K++    + +D L+    G ++ L ++     R  F +AD+
Sbjct: 3   ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYA--GNLESLSDISESN-RYNFEHADI 59

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT- 190
            D+  + + F +   DAVMH AA ++V  S   P  +       T  +LE   ++     
Sbjct: 60  CDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALG 119

Query: 191 --------LIYSSTCATYGEPEKMPI----------TEETPQAPINPYGKAKKMAEDIIL 232
                     + ST   YG+                TE T  AP +PY  +K  ++ ++ 
Sbjct: 120 EDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVR 179

Query: 233 DFSKNSDMAVMILRYFNVIG 252
            + +   +  ++    N  G
Sbjct: 180 AWRRTYGLPTIVTNCSNNYG 199

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  157 bits (396), Expect = 3e-46
 Identities = 48/186 (25%), Positives = 82/186 (44%), Gaps = 6/186 (3%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNL-SRGNIGAVKVLQELFPE--PGRLQFIYA 129
            L+TG  G  GS+ A  LL+  Y V  +    S  N G ++ L +       G ++  Y 
Sbjct: 4   ALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYG 63

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
           DL D+  + K  +E     + +  A ++V  S              TL +L+++   G+ 
Sbjct: 64  DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLI 123

Query: 190 ---TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
                  +ST   YG+ +++P  E TP  P +PYG AK  A  I+++F +  ++  +   
Sbjct: 124 NSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGI 183

Query: 247 YFNVIG 252
            FN   
Sbjct: 184 LFNHES 189

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score =  152 bits (383), Expect = 2e-44
 Identities = 72/194 (37%), Positives = 111/194 (57%), Gaps = 4/194 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   I
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120

Query: 193 YSSTCATYGEPEKMPITEET-PQAPINPYGKAKKMAEDIILD-FSKNSDMAVMILRYFNV 250
           +SS+   YG+  K+P  E      P +PYGK+K M E I+ D      D ++ +LRYFN 
Sbjct: 121 FSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNP 180

Query: 251 IGSDPEGRLGEAPR 264
           +G+ P G +GE P+
Sbjct: 181 VGAHPSGDMGEDPQ 194

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  147 bits (370), Expect = 2e-42
 Identities = 85/198 (42%), Positives = 111/198 (56%), Gaps = 8/198 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGGAGYIGSH  + L+++ Y   + DNLS     +V  L+ L      + F   DL 
Sbjct: 4   VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKH--HIPFYEVDLC 61

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D K + K F E   D+V+HFA +  VGEST  PL+YYHN    T+V+LE M ++ V   +
Sbjct: 62  DRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFV 121

Query: 193 YSSTCATYGE----PEKMPITEETPQAPINPYGKAKKMAEDIILDF--SKNSDMAVMILR 246
           +SS+   YG+    P  +PI EE P  P NPYG  K   E+I+ D   S        ILR
Sbjct: 122 FSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILR 181

Query: 247 YFNVIGSDPEGRLGEAPR 264
           YFN IG+ P G +GE P 
Sbjct: 182 YFNPIGAHPSGLIGEDPL 199

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score =  143 bits (362), Expect = 3e-41
 Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 2/190 (1%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            L+TG AG+IGS+    LLK   +V  +DN + G+   +  ++ L  E     F +    
Sbjct: 19  WLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGD 78

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
                +   +    D V+H AA+  V  S  DP+          L +L +     V +  
Sbjct: 79  IRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFT 138

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVI- 251
           Y+++ +TYG+   +P  E+T   P++PY   K + E     FS+    + + LRYFNV  
Sbjct: 139 YAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFG 198

Query: 252 -GSDPEGRLG 260
              DP G   
Sbjct: 199 RRQDPNGAYA 208

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score =  140 bits (353), Expect = 3e-40
 Identities = 32/221 (14%), Positives = 68/221 (30%), Gaps = 29/221 (13%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V + G  G +GS    +L +      ++                             +L 
Sbjct: 5   VFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDEL-----------------------NLL 41

Query: 133 DAKAVNKFFSENAFDAVMHFA-AVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
           D++AV+ FF+    D V   A  V  +  +   P  + +        ++ +  ++ V+ L
Sbjct: 42  DSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKL 101

Query: 192 IYSSTCATYGEPEKMPITEE-----TPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
           ++  +   Y +  K P+ E      T +    PY  AK     +   +++        + 
Sbjct: 102 LFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVM 161

Query: 247 YFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAG 287
             N+ G         +                 A   ++ G
Sbjct: 162 PTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWG 202

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score =  137 bits (346), Expect = 4e-39
 Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 11/186 (5%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSY------RVTIVDNLSRGNIGAVKVLQELFPEPGRLQF 126
           +LVTGGAG+IGSH   +LL  +Y       V ++D+L+    G    L  +  +P RL+F
Sbjct: 3   LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYA--GNRANLAPVDADP-RLRF 59

Query: 127 IYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH 186
           ++ D+ DA            DA++HFAA ++V  S      +       T  +L+     
Sbjct: 60  VHGDIRDAG--LLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA 117

Query: 187 GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
           GV  +++ ST   YG  +    TE +P  P +PY  +K  ++ +   + +   + V I R
Sbjct: 118 GVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITR 177

Query: 247 YFNVIG 252
             N  G
Sbjct: 178 CCNNYG 183

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  125 bits (315), Expect = 1e-34
 Identities = 47/208 (22%), Positives = 76/208 (36%), Gaps = 9/208 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNL-SRGNIGAVKVLQEL--FPEPGRLQFIYA 129
            L+TG  G  GS+    LL   Y V  +    S  N   +  +           ++  YA
Sbjct: 4   ALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYA 63

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESM----AR 185
           DL DA ++ ++      D V + AA ++V  S   P      + +  L +LE++      
Sbjct: 64  DLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTID 123

Query: 186 HGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMIL 245
            G     Y +  +        P +E TP  P +PY  +K  A    +++ +   +     
Sbjct: 124 SGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNG 183

Query: 246 RYFNVIGSDPEGRLGEAPRPELREHGRI 273
             FN     P        R   R  GRI
Sbjct: 184 ILFNHES--PRRGENFVTRKITRALGRI 209

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score =  126 bits (316), Expect = 2e-34
 Identities = 46/195 (23%), Positives = 87/195 (44%), Gaps = 21/195 (10%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA 129
           +++VTGGAG+IGS+    +  +     VT++D L+    G    L+ +  +  R++ +  
Sbjct: 4   NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYA--GNKANLEAILGD--RVELVVG 59

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
           D+ DA+ V+K  ++      +H+AA ++   S  DP  + H     T  +LE+  ++ + 
Sbjct: 60  DIADAELVDKLAAKADAI--VHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIR 117

Query: 190 TLIYSSTCATYGE------------PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN 237
              + ST   YG+                  T ET   P +PY   K  ++ I+  + ++
Sbjct: 118 F-HHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRS 176

Query: 238 SDMAVMILRYFNVIG 252
             +   I    N  G
Sbjct: 177 FGVKATISNCSNNYG 191

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score =  118 bits (296), Expect = 9e-32
 Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 20/210 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TGG G++GS+ A   L     + + DNLSR   GA   L  L    G  +F++ D+ 
Sbjct: 3   LLITGGCGFLGSNLASFALSQGIDLIVFDNLSRK--GATDNLHWL-SSLGNFEFVHGDIR 59

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT-L 191
           +   V +  ++   D+  H A    +  S  +P   +      TL +LE++ ++  +  +
Sbjct: 60  NKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNI 119

Query: 192 IYSSTCATYGEPEKMP----------------ITEETPQAPINPYGKAKKMAEDIILDFS 235
           IYSST   YG+ E+                    E T     +PYG +K  A+  +LD++
Sbjct: 120 IYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYA 179

Query: 236 KNSDMAVMILRYFNVIGSDPEGRLGEAPRP 265
           +   +  ++ R+ ++ G        +    
Sbjct: 180 RIFGLNTVVFRHSSMYGGRQFATYDQGWVG 209

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  116 bits (291), Expect = 8e-31
 Identities = 34/190 (17%), Positives = 70/190 (36%), Gaps = 17/190 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           + +TG  G+I SH A RL  + + V   D     +         +  +    +F   DL 
Sbjct: 18  ISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH---------MTEDMFCDEFHLVDLR 68

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
             +   K          +           +   +  Y+N    +  ++E+   +G+    
Sbjct: 69  VMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTM-ISFNMIEAARINGIKRFF 127

Query: 193 YSSTCATYGEPEKMPIT-------EETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMIL 245
           Y+S+   Y E +++  T       +  P  P + +G  K   E++   ++K+  +   I 
Sbjct: 128 YASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIG 187

Query: 246 RYFNVIGSDP 255
           R+ N+ G   
Sbjct: 188 RFHNIYGPFG 197

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score =  115 bits (287), Expect = 1e-30
 Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 4/181 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG  G  G++ A  LL+  YRV  +      +      L+EL  E   +Q+   D+ 
Sbjct: 3   ALVTGITGQDGAYLAKLLLEKGYRVHGLVARR--SSDTRWRLRELGIEG-DIQYEDGDMA 59

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           DA +V +   +     V + AA ++VG S   P+            +LE++ +   +T  
Sbjct: 60  DACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRF 119

Query: 193 Y-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVI 251
           Y +ST   +G  +     E TP  P +PYG AK     I +++ ++  +       FN  
Sbjct: 120 YQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHE 179

Query: 252 G 252
            
Sbjct: 180 S 180

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (287), Expect = 2e-30
 Identities = 75/198 (37%), Positives = 108/198 (54%), Gaps = 6/198 (3%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP----EPGRLQFIY 128
           VLVTGGAGYIGSH  L LL+  Y   ++DN      G   + + L          ++F  
Sbjct: 5   VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64

Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            D+ D  A+ + F + +F AV+HFA +  VGES   PL YY    + T+ +LE M  HGV
Sbjct: 65  MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGV 124

Query: 189 DTLIYSSTCATYGEPEKMPITEETPQ-APINPYGKAKKMAEDIILDFSK-NSDMAVMILR 246
             L++SS+   YG P+ +P+ E  P     NPYGK+K   E++I D  + +     ++LR
Sbjct: 125 KNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLR 184

Query: 247 YFNVIGSDPEGRLGEAPR 264
           YFN  G+   G +GE P+
Sbjct: 185 YFNPTGAHASGCIGEDPQ 202

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 83.7 bits (205), Expect = 6e-19
 Identities = 35/197 (17%), Positives = 64/197 (32%), Gaps = 7/197 (3%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V VTG  G+ G   +L L      V      +         L E       +Q    D+ 
Sbjct: 11  VFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTV----PSLFETARVADGMQSEIGDIR 66

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D   + +   E   + V H AA   V  S  +P++ Y      T+ +LE++   G    +
Sbjct: 67  DQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAV 126

Query: 193 YSSTCATYGEPEKMPITEETPQ--APINPYGKAKKMAEDIILDFSKNSDMAVMILRYF-N 249
            + T     + ++        +     +PY  +K  AE +   +  +        ++   
Sbjct: 127 VNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTA 186

Query: 250 VIGSDPEGRLGEAPRPE 266
           V        +G      
Sbjct: 187 VATVRAGNVIGGGDWAL 203

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 82.9 bits (203), Expect = 1e-18
 Identities = 69/217 (31%), Positives = 103/217 (47%), Gaps = 23/217 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKV--------------LQEL 117
           VLV GGAGYIGSH    LL+D+ + V IVD+L   +  +  V                + 
Sbjct: 5   VLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKP 64

Query: 118 FPEPGRLQFIYADLGDAKAVNK-FFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNT 176
                       D+ +   +N  F      DAV+H  A   VGES  DPLKYY N     
Sbjct: 65  PWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGI 124

Query: 177 LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ-------APINPYGKAKKMAED 229
           L +L++M  H  D +I+SS+ A +G P    ++            +P +PYG++K +AE 
Sbjct: 125 LRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAER 184

Query: 230 IILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPE 266
           +I D ++   +  + LRYFN  G+  +G +GE  +  
Sbjct: 185 MIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGS 221

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 76.9 bits (187), Expect = 1e-16
 Identities = 52/255 (20%), Positives = 80/255 (31%), Gaps = 32/255 (12%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG---------- 122
           V+V GG GY G   AL L K +Y V IVDNL R        L+ L P             
Sbjct: 4   VMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKA 63

Query: 123 ----RLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN--- 175
                ++    D+ D + + + F     D+V+HF        S +D  +  +   +N   
Sbjct: 64  LTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIG 123

Query: 176 TLVVLESMARHGVDTLIYSSTCATYGEPEKMPI--------------TEETPQAPINPYG 221
           TL VL ++   G +  +             + I              T   P+   + Y 
Sbjct: 124 TLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYH 183

Query: 222 KAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPE-GRLGEAPRPELREHGRISGACFDA 280
            +K      I    K   +    L    V G   +   + E  R  L        A    
Sbjct: 184 LSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRF 243

Query: 281 ARGIIAGLKVCYHIM 295
                 G  +  +  
Sbjct: 244 CVQAAVGHPLTVYGK 258

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 73.4 bits (178), Expect = 1e-15
 Identities = 31/177 (17%), Positives = 58/177 (32%), Gaps = 22/177 (12%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+ G  G +G     R L     +  +D  S+                        D  
Sbjct: 3   ILLFGKTGQVGWELQ-RSLAPVGNLIALDVHSK--------------------EFCGDFS 41

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           + K V +   +   D +++ AA   V ++  +P        ++   + ++    G   + 
Sbjct: 42  NPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVH 101

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFN 249
           YS+     G    +P  E    +P+N YGK K   E  + D      +      Y  
Sbjct: 102 YSTDYVFPG-TGDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAG 157

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 70.8 bits (171), Expect = 1e-14
 Identities = 35/184 (19%), Positives = 71/184 (38%), Gaps = 16/184 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           VL+ G  G+IG+H   RLL++  Y V  +D  S         +      P    F+  D+
Sbjct: 3   VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDA-------ISRFLNHP-HFHFVEGDI 54

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
                  ++  +   D V+   A+A   E T +PL+ +       L ++    ++    +
Sbjct: 55  SIHSEWIEYHVKK-CDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRII 113

Query: 192 IYSSTCATYGEPEKMPITEETPQ------APINPYGKAKKMAEDIILDFSKNSDMAVMIL 245
             S++       +K    + +         P   Y  +K++ + +I  + +   +   + 
Sbjct: 114 FPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLF 173

Query: 246 RYFN 249
           R FN
Sbjct: 174 RPFN 177

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 66.4 bits (160), Expect = 3e-13
 Identities = 37/223 (16%), Positives = 68/223 (30%), Gaps = 29/223 (13%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TG  G +G     +L   +  V   D                            D+ 
Sbjct: 4   ILITGANGQLGREIQKQLKGKNVEVIPTD------------------------VQDLDIT 39

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +  AVNKFF+E   + V++ AA   V +        Y         +  +    G + + 
Sbjct: 40  NVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQ 99

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIG 252
            S+         K PITE     P + YGK K   E+ +   +    +     R   + G
Sbjct: 100 ISTDYVFD-GEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPKYYIV----RTAWLYG 154

Query: 253 SDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVCYHIM 295
                        +  +  ++           +   +V   ++
Sbjct: 155 DGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVI 197

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 63.3 bits (152), Expect = 3e-12
 Identities = 30/223 (13%), Positives = 59/223 (26%), Gaps = 18/223 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTG +G  G     +L + S +      +                  G       D+ 
Sbjct: 6   VLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQ--------GKEKIGGEADVFIGDIT 57

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS--NTLVVLESMARHGVDT 190
           DA   +   +    DA++   +     +   DP K         +     +       + 
Sbjct: 58  DAD--SINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQ 115

Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMI-LRYFN 249
           +  +             +    P  P+N  G    +      +            +R   
Sbjct: 116 IDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGG 175

Query: 250 VIGSDPEGR---LGEAPRPELREHGRISGACFDAARGIIAGLK 289
           ++  +   R   +G+       +   +  A  D A   I  L 
Sbjct: 176 LLDKEGGVRELLVGKDDELLQTDTKTVPRA--DVAEVCIQALL 216

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.2 bits (147), Expect = 8e-12
 Identities = 28/217 (12%), Positives = 61/217 (28%), Gaps = 32/217 (14%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           + + G  G  G     + ++  Y VT++    R +                     AD+ 
Sbjct: 6   IAIFGATGQTGLTTLAQAVQAGYEVTVLV---RDSSRLPSEGPRPAHVVVGDVLQAADVD 62

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
              A          DAV+             + L     ++     ++ +M  HGVD ++
Sbjct: 63  KTVA--------GQDAVIVLLGTR-------NDLSPTTVMSEGARNIVAAMKAHGVDKVV 107

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIG 252
             ++     +P K+P         +            ++    + S +  + +   ++  
Sbjct: 108 ACTSAFLLWDPTKVPP-------RLQAVTDDHIRMHKVL----RESGLKYVAVMPPHIGD 156

Query: 253 SDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLK 289
               G               IS    D    ++  L 
Sbjct: 157 QPLTGAYTVTLDGRGPS-RVISKH--DLGHFMLRCLT 190

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 62.1 bits (149), Expect = 1e-11
 Identities = 34/202 (16%), Positives = 60/202 (29%), Gaps = 27/202 (13%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTG  G++ SH   +LL+  Y+V      S   +  ++   +          +  D+ 
Sbjct: 14  VLVTGANGFVASHVVEQLLEHGYKVRGTAR-SASKLANLQKRWDAKYPGRFETAVVEDML 72

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
              A ++     A  A +       V  S          I      +  + A   V   +
Sbjct: 73  KQGAYDEVIKGAAGVAHIAS----VVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFV 128

Query: 193 YSSTCATYGEPEK--------------------MPITEETPQAPINPYGKAKKMAEDIIL 232
            +S+  +   P+                       + E  PQ  +  Y  +K  AE    
Sbjct: 129 LTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAW 188

Query: 233 DF--SKNSDMAVMILRYFNVIG 252
            F         +  +     IG
Sbjct: 189 KFMDENKPHFTLNAVLPNYTIG 210

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 60.8 bits (145), Expect = 3e-11
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGN 107
           ++VTGGAG+IGS+    L       + +VDNL  G 
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT 37

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 56.3 bits (134), Expect = 7e-10
 Identities = 11/59 (18%), Positives = 22/59 (37%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           +L+ G  GYIG H A   L   +   ++   S  +  + K       +      ++  +
Sbjct: 6   ILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSI 64

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 55.9 bits (133), Expect = 1e-09
 Identities = 21/223 (9%), Positives = 53/223 (23%), Gaps = 24/223 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VL+ GG GYIG       +   +   ++      +      +   F + G  + I A L 
Sbjct: 6   VLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLG-AKLIEASLD 64

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D + +     +                           +     L ++E++   G     
Sbjct: 65  DHQRLVDALKQVDVVISALAG-------------GVLSHHILEQLKLVEAIKEAGNIKRF 111

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIG 252
             S      +  +  +            G    + +  +    + + +    +      G
Sbjct: 112 LPSEFGMDPDIMEHAL----------QPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAG 161

Query: 253 SDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVCYHIM 295
                               +     +     +    V  + +
Sbjct: 162 YFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTI 204

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.1 bits (119), Expect = 1e-07
 Identities = 31/167 (18%), Positives = 49/167 (29%), Gaps = 5/167 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEP--GRLQFIYAD 130
            +VTGGA  IG      LL+    V I          A   LQ   P     R+  I  +
Sbjct: 15  AIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCN 74

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           + + + VN                V   G   L P     +I+S     +      G   
Sbjct: 75  IRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPA---EHISSKGWHAVLETNLTGTFY 131

Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN 237
           +  +   +   E     +    P     P       A   + + +K+
Sbjct: 132 MCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTKS 178

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.6 bits (118), Expect = 1e-07
 Identities = 33/140 (23%), Positives = 49/140 (35%), Gaps = 10/140 (7%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG A  IG   A  LL    +V +VD      +     L E F EP +  FI  D+ 
Sbjct: 6   ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF-EPQKTLFIQCDVA 64

Query: 133 DAKAVNKFFSE--NAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMARHG 187
           D + +   F +  + F  +      A V            N+ S    T + L+ M++  
Sbjct: 65  DQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQN 124

Query: 188 VDT----LIYSSTCATYGEP 203
                  +  SS        
Sbjct: 125 GGEGGIIINMSSLAGLMPVA 144

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 49.6 bits (118), Expect = 1e-07
 Identities = 12/71 (16%), Positives = 29/71 (40%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V++TG +  IG   A+   ++   VTI    S       +++ +      ++  + AD+ 
Sbjct: 8   VIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVT 67

Query: 133 DAKAVNKFFSE 143
                ++  + 
Sbjct: 68  TEDGQDQIINS 78

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 49.3 bits (117), Expect = 1e-07
 Identities = 20/91 (21%), Positives = 34/91 (37%), Gaps = 5/91 (5%)

Query: 53  QSPTFSSPSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVK 112
             P    P   S   EG    LVTG    IG   A+ L +   +V +    +     A +
Sbjct: 4   AIPGPLGPQSASL--EGKV-ALVTGAGRGIGREMAMELGRRGCKVIVNY--ANSTESAEE 58

Query: 113 VLQELFPEPGRLQFIYADLGDAKAVNKFFSE 143
           V+  +         + A++G  + + + F E
Sbjct: 59  VVAAIKKNGSDAACVKANVGVVEDIVRMFEE 89

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 48.9 bits (116), Expect = 2e-07
 Identities = 29/161 (18%), Positives = 47/161 (29%), Gaps = 12/161 (7%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
            LVTGG+  +G   A  L +    V +     R    A +  Q+L  + G        D+
Sbjct: 8   ALVTGGSRGLGFGIAQGLAEAGCSVVVAS---RNLEEASEAAQKLTEKYGVETMAFRCDV 64

Query: 132 GDAKAVNKFFSE-----NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH 186
            + + V K            D V++ A +     +   PL  +  +    L     + R 
Sbjct: 65  SNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCRE 124

Query: 187 GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA 227
                                +T E    P      A K  
Sbjct: 125 ---AFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGG 162

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 48.9 bits (116), Expect = 2e-07
 Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 4/72 (5%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
           ++VTGG   IG      +      V ++    R    AV+V +++  E G + +    D+
Sbjct: 12  IIVTGGNRGIGLAFTRAVAAAGANVAVIY---RSAADAVEVTEKVGKEFGVKTKAYQCDV 68

Query: 132 GDAKAVNKFFSE 143
            +   V K   +
Sbjct: 69  SNTDIVTKTIQQ 80

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 48.9 bits (116), Expect = 2e-07
 Identities = 17/97 (17%), Positives = 32/97 (32%), Gaps = 9/97 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            ++TGGAG IG   A   ++   +V I D          + +      P  + F++ D+ 
Sbjct: 9   AIITGGAGGIGETTAKLFVRYGAKVVIADI----ADDHGQKVCNNIGSPDVISFVHCDVT 64

Query: 133 DAKAVNKFFSENA-----FDAVMHFAAVAYVGESTLD 164
             + V              D +     V      ++ 
Sbjct: 65  KDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSIL 101

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 48.5 bits (115), Expect = 2e-07
 Identities = 20/121 (16%), Positives = 41/121 (33%), Gaps = 9/121 (7%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            ++TGG   IG   A + +++  +V I       +    +   +    P ++QF   D  
Sbjct: 9   AIITGGTLGIGLAIATKFVEEGAKVMITGR----HSDVGEKAAKSVGTPDQIQFFQHDSS 64

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG 187
           D     K F            +++ A +A            +  + +  L  +    R G
Sbjct: 65  DEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLG 124

Query: 188 V 188
           +
Sbjct: 125 I 125

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 48.7 bits (115), Expect = 2e-07
 Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG    IG   ALRL+KD + V I D     +  A  V  E+    G    +  D+ 
Sbjct: 4   ALVTGAGQGIGKAIALRLVKDGFAVAIAD---YNDATAKAVASEINQAGGHAVAVKVDVS 60

Query: 133 DAKAVNKFFSE 143
           D   V     +
Sbjct: 61  DRDQVFAAVEQ 71

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 48.0 bits (114), Expect = 3e-07
 Identities = 14/92 (15%), Positives = 32/92 (34%), Gaps = 5/92 (5%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            ++TG +  IG   A+   ++  +VTI    +       + +         +  + AD+ 
Sbjct: 8   AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT 67

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVG 159
                ++  S         D +++ A  A   
Sbjct: 68  TDAGQDEILSTTLGKFGKLDILVNNAGAAIPD 99

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 47.9 bits (113), Expect = 4e-07
 Identities = 27/155 (17%), Positives = 48/155 (30%), Gaps = 6/155 (3%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG  G IG   ALRL ++   + ++D          K    +  +    +    D+ 
Sbjct: 8   CLVTGAGGNIGLATALRLAEEGTAIALLD---MNREALEKAEASVREKGVEARSYVCDVT 64

Query: 133 DAKAVNKFFSE--NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
             +AV          F  +      A    +      Y  +  +  L +  + A H +  
Sbjct: 65  SEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKA 124

Query: 191 LIYSSTCATYGEPEKMP-ITEETPQAPINPYGKAK 224
           +        YG       +        +  YG +K
Sbjct: 125 VSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSK 159

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 47.7 bits (113), Expect = 4e-07
 Identities = 13/71 (18%), Positives = 21/71 (29%), Gaps = 3/71 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTGG+  IG      L      V       R        L +   +  +++    DL 
Sbjct: 11  ALVTGGSRGIGYGIVEELASLGASVYTCS---RNQKELNDCLTQWRSKGFKVEASVCDLS 67

Query: 133 DAKAVNKFFSE 143
                 +  + 
Sbjct: 68  SRSERQELMNT 78

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 47.8 bits (113), Expect = 4e-07
 Identities = 19/71 (26%), Positives = 25/71 (35%), Gaps = 3/71 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG    IG   A RL K+  RV +     RG  G    L+EL            D+ 
Sbjct: 5   ALVTGATSGIGLEIARRLGKEGLRVFVCA---RGEEGLRTTLKELREAGVEADGRTCDVR 61

Query: 133 DAKAVNKFFSE 143
               +    + 
Sbjct: 62  SVPEIEALVAA 72

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 47.3 bits (112), Expect = 6e-07
 Identities = 14/71 (19%), Positives = 30/71 (42%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V++TG +  IG  AA+   K+  +VTI            + + +      ++  + AD+ 
Sbjct: 7   VIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVT 66

Query: 133 DAKAVNKFFSE 143
           +A   +   + 
Sbjct: 67  EASGQDDIINT 77

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 47.4 bits (112), Expect = 7e-07
 Identities = 16/100 (16%), Positives = 30/100 (30%), Gaps = 4/100 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
             +TGG   +G      L     +  I     R         +++  + G ++  I  D+
Sbjct: 28  AFITGGGTGLGKGMTTLLSSLGAQCVIAS---RKMDVLKATAEQISSQTGNKVHAIQCDV 84

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHN 171
            D   V    SE    A      +     + + P +    
Sbjct: 85  RDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSP 124

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 46.9 bits (111), Expect = 7e-07
 Identities = 14/69 (20%), Positives = 22/69 (31%), Gaps = 3/69 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG    IG   A  L K    V  +    R       V+ E+            D+ 
Sbjct: 13  ALVTGAGRGIGREIAKMLAKSVSHVICIS---RTQKSCDSVVDEIKSFGYESSGYAGDVS 69

Query: 133 DAKAVNKFF 141
             + +++  
Sbjct: 70  KKEEISEVI 78

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 47.7 bits (112), Expect = 7e-07
 Identities = 17/135 (12%), Positives = 38/135 (28%), Gaps = 19/135 (14%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           + V G  G  G+          + V           G +   +EL   P  +      L 
Sbjct: 6   IAVVGATGRQGASLIRVAAAVGHHVRA---QVHSLKGLIA--EELQAIPN-VTLFQGPLL 59

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   +         D +   A +A++  ++        +  +    + ++  R G     
Sbjct: 60  NNVPL--------MDTLFEGAHLAFINTTS-----QAGDEIAIGKDLADAAKRAGTIQHY 106

Query: 193 YSSTCATYGEPEKMP 207
             S+   +      P
Sbjct: 107 IYSSMPDHSLYGPWP 121

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.9 bits (111), Expect = 8e-07
 Identities = 22/88 (25%), Positives = 33/88 (37%), Gaps = 8/88 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG    IG      L     +V  V    R N   V + +E       ++ +  DLG
Sbjct: 8   ALVTGAGKGIGRDTVKALHASGAKVVAVT---RTNSDLVSLAKEC----PGIEPVCVDLG 60

Query: 133 DAKAVNKFFSE-NAFDAVMHFAAVAYVG 159
           D  A  K        D +++ AA+  + 
Sbjct: 61  DWDATEKALGGIGPVDLLVNNAALVIMQ 88

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 47.0 bits (111), Expect = 8e-07
 Identities = 15/71 (21%), Positives = 22/71 (30%), Gaps = 3/71 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTGG+  IG      L     RV       R      + L+    +   ++    DL 
Sbjct: 9   ALVTGGSKGIGYAIVEELAGLGARVYTCS---RNEKELDECLEIWREKGLNVEGSVCDLL 65

Query: 133 DAKAVNKFFSE 143
                +K    
Sbjct: 66  SRTERDKLMQT 76

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 46.7 bits (110), Expect = 1e-06
 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VL+TGG   +G   A+RL  +  ++++VD  S G   +   + E  P+   +    AD+ 
Sbjct: 7   VLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPD-AEVLTTVADVS 65

Query: 133 DAKAVNKFFSE 143
           D   V  + + 
Sbjct: 66  DEAQVEAYVTA 76

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 46.7 bits (110), Expect = 1e-06
 Identities = 28/144 (19%), Positives = 44/144 (30%), Gaps = 15/144 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            L TG    IG   A+ L +    V +    S     A +V+ EL     +   I AD+ 
Sbjct: 9   ALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSK--AAEEVVAELKKLGAQGVAIQADIS 66

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLV--------V 179
               V   F +        D VM  + +    +      + +  + +             
Sbjct: 67  KPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQG 126

Query: 180 LESMARHGVDTLIYSSTCATYGEP 203
           L+   R G   L  S      G P
Sbjct: 127 LKHCRRGGRIILTSSIAAVMTGIP 150

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 46.6 bits (110), Expect = 1e-06
 Identities = 14/98 (14%), Positives = 29/98 (29%), Gaps = 8/98 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            ++TG    IG   A+        V + D        A  V+ E+    G+      D+ 
Sbjct: 14  AIITGAGAGIGKEIAITFATAGASVVVSD---INADAANHVVDEIQQLGGQAFACRCDIT 70

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVGESTLDP 165
             + ++             D +++ A         +  
Sbjct: 71  SEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPM 108

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (109), Expect = 1e-06
 Identities = 24/88 (27%), Positives = 33/88 (37%), Gaps = 8/88 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTG    IG      L     RV  V             L  L  E   ++ +  DLG
Sbjct: 10  VLVTGAGKGIGRGTVQALHATGARVVAVSR-------TQADLDSLVRECPGIEPVCVDLG 62

Query: 133 DAKAVNKFFSE-NAFDAVMHFAAVAYVG 159
           D +A  +        D +++ AAVA + 
Sbjct: 63  DWEATERALGSVGPVDLLVNNAAVALLQ 90

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 46.1 bits (109), Expect = 1e-06
 Identities = 22/150 (14%), Positives = 46/150 (30%), Gaps = 19/150 (12%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTGGA  +G      LL +  +V   D          ++  EL     R  F+  D+ 
Sbjct: 9   ALVTGGASGVGLEVVKLLLGEGAKVAFSD---INEAAGQQLAAEL---GERSMFVRHDVS 62

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTL--------VV 179
                    +         + +++ A +   G+     L+ +  +               
Sbjct: 63  SEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQG 122

Query: 180 LESMARHGVDTLIYSSTCATYGEPEKMPIT 209
           + +M   G   +  +S  +     +    +
Sbjct: 123 IAAMKETGGSIINMASVSSWLPIEQYAGYS 152

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 46.3 bits (109), Expect = 1e-06
 Identities = 14/71 (19%), Positives = 26/71 (36%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V++TG +  +G   A+R   +  +V +          A  VL+E+    G    +  D+ 
Sbjct: 10  VVITGSSTGLGKSMAIRFATEKAKVVVNYR--SKEDEANSVLEEIKKVGGEAIAVKGDVT 67

Query: 133 DAKAVNKFFSE 143
               V      
Sbjct: 68  VESDVINLVQS 78

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 45.9 bits (108), Expect = 2e-06
 Identities = 33/130 (25%), Positives = 49/130 (37%), Gaps = 11/130 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTG A  IG  A     ++   +  VD   R      + +  L         + AD+ 
Sbjct: 8   ILVTGAASGIGRAALDLFAREGASLVAVD---REERLLAEAVAAL---EAEAIAVVADVS 61

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG 187
           D KAV   F+E          V HFA VA+   S   PL+ +  +    L     +AR  
Sbjct: 62  DPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKA 121

Query: 188 VDTLIYSSTC 197
            + L    + 
Sbjct: 122 GEVLEEGGSL 131

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 45.9 bits (108), Expect = 2e-06
 Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 2/69 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V+VTG +  IG   AL L K   +V +    +R    A +V +++    G+      D+ 
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNY--ARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 133 DAKAVNKFF 141
               V    
Sbjct: 62  KEADVEAMM 70

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (109), Expect = 2e-06
 Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 6/92 (6%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG +G IG+  A  L++   +V      + GNI  +    +    PG L     DL 
Sbjct: 13  ALVTGASGGIGAAVARALVQQGLKVVGCA-RTVGNIEELAAECKSAGYPGTLIPYRCDLS 71

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVG 159
           + + +   FS      +  D  ++ A +A   
Sbjct: 72  NEEDILSMFSAIRSQHSGVDICINNAGLARPD 103

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 45.7 bits (108), Expect = 2e-06
 Identities = 17/119 (14%), Positives = 46/119 (38%), Gaps = 11/119 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V++TGGA  +G+ AA + +    RV + D     +       +EL       ++ + D+ 
Sbjct: 8   VIITGGARGLGAEAARQAVAAGARVVLAD---VLDEEGAATAREL---GDAARYQHLDVT 61

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH 186
             +   +  +       + D +++ A ++       + ++ +  +    L  +    + 
Sbjct: 62  IEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKT 120

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 45.4 bits (107), Expect = 2e-06
 Identities = 12/71 (16%), Positives = 18/71 (25%), Gaps = 3/71 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG   IG             +       R      + L +   +  ++     D  
Sbjct: 11  VLVTGGTKGIGHAIVEEFAGFGAVIHTCA---RNEYELNECLSKWQKKGFQVTGSVCDAS 67

Query: 133 DAKAVNKFFSE 143
                 K    
Sbjct: 68  LRPEREKLMQT 78

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.3 bits (107), Expect = 3e-06
 Identities = 28/143 (19%), Positives = 43/143 (30%), Gaps = 21/143 (14%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V+VTGG   IG+      +    RV I D             + L  E     FI  D+ 
Sbjct: 9   VVVTGGGRGIGAGIVRAFVNSGARVVICDK-------DESGGRALEQELPGAVFILCDVT 61

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVGEST--LDPLKYYHNITSN-------TLV 178
               V    SE        D V++ A      +         +   +  N       T +
Sbjct: 62  QEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKL 121

Query: 179 VLESMARHGVDTLIYSSTCATYG 201
            L  + +   + +  SS     G
Sbjct: 122 ALPYLRKSQGNVINISSLVGAIG 144

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 44.9 bits (106), Expect = 4e-06
 Identities = 16/71 (22%), Positives = 27/71 (38%), Gaps = 5/71 (7%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            ++TGGA  IG   A R   +   + I D +      A   ++ L     R+  +  D+ 
Sbjct: 8   AVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNL---GRRVLTVKCDVS 62

Query: 133 DAKAVNKFFSE 143
               V  F  +
Sbjct: 63  QPGDVEAFGKQ 73

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 44.3 bits (104), Expect = 6e-06
 Identities = 19/149 (12%), Positives = 47/149 (31%), Gaps = 24/149 (16%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VL+TGGA  +G     R + +  +V ++D   +      ++  +       +  I  D+ 
Sbjct: 8   VLITGGASGLGRALVDRFVAEGAKVAVLD---KSAERLAELETDH---GDNVLGIVGDVR 61

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLV--------- 178
             +   +  S         D ++  A +     + +D  +   +   + +          
Sbjct: 62  SLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIH 121

Query: 179 ----VLESMARHGVDTLIYSSTCATYGEP 203
                L ++     + +   S    Y   
Sbjct: 122 AVKACLPALVASRGNVIFTISNAGFYPNG 150

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (103), Expect = 9e-06
 Identities = 14/92 (15%), Positives = 29/92 (31%), Gaps = 8/92 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VL+TG    IG   A    K   ++ + D       G  +   +      ++     D  
Sbjct: 10  VLITGAGHGIGRLTAYEFAKLKSKLVLWD---INKHGLEETAAKCKGLGAKVHTFVVDCS 66

Query: 133 DAKAVNKFFSENA-----FDAVMHFAAVAYVG 159
           + + +     +          +++ A V Y  
Sbjct: 67  NREDIYSSAKKVKAEIGDVSILVNNAGVVYTS 98

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 43.6 bits (102), Expect = 1e-05
 Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 6/71 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            L+TG A  IG   A   +++  RV I D        A     E+         I  D+ 
Sbjct: 8   ALITGSARGIGRAFAEAYVREGARVAIAD---INLEAARATAAEI---GPAACAIALDVT 61

Query: 133 DAKAVNKFFSE 143
           D  ++++  +E
Sbjct: 62  DQASIDRCVAE 72

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 43.6 bits (102), Expect = 1e-05
 Identities = 16/72 (22%), Positives = 24/72 (33%), Gaps = 3/72 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
            +VTG    IG   A  L      + +            KV   L  + G ++ +  ADL
Sbjct: 7   AVVTGSTSGIGLGIATALAAQGADIVLNGF--GDAAEIEKVRAGLAAQHGVKVLYDGADL 64

Query: 132 GDAKAVNKFFSE 143
              +AV      
Sbjct: 65  SKGEAVRGLVDN 76

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 43.5 bits (102), Expect = 1e-05
 Identities = 15/105 (14%), Positives = 35/105 (33%), Gaps = 11/105 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LV+GGA  +G+     ++ +  +V   D     +     +  EL       ++++ D+ 
Sbjct: 9   ALVSGGARGMGASHVRAMVAEGAKVVFGD---ILDEEGKAMAAEL---ADAARYVHLDVT 62

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVGESTLDPLKYYHNI 172
                                +++ A +  +G      L  +  I
Sbjct: 63  QPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRI 107

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 43.2 bits (101), Expect = 1e-05
 Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 4/75 (5%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRV----TIVDNLSRGNIGAVKVLQELFPEPGRLQFIY 128
           +L+TG    IG   AL   + +        ++   SR      K+  E   E      I 
Sbjct: 4   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTIT 63

Query: 129 ADLGDAKAVNKFFSE 143
           AD+ D   V +  + 
Sbjct: 64  ADISDMADVRRLTTH 78

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 42.1 bits (99), Expect = 3e-05
 Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 14/92 (15%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGGA  IG   A    ++   V + D          +V + +        F   DL 
Sbjct: 8   VLVTGGARGIGRAIAQAFAREGALVALCDL----RPEGKEVAEAI-----GGAFFQVDLE 58

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVG 159
           D +   +F  E        D +++ AA+A  G
Sbjct: 59  DERERVRFVEEAAYALGRVDVLVNNAAIAAPG 90

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 42.0 bits (98), Expect = 3e-05
 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 14/71 (19%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG   IG   A RL  D ++V +    S                P  L  +  D+ 
Sbjct: 10  VLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS--------------GAPKGLFGVEVDVT 55

Query: 133 DAKAVNKFFSE 143
           D+ AV++ F+ 
Sbjct: 56  DSDAVDRAFTA 66

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 41.7 bits (96), Expect = 4e-05
 Identities = 8/29 (27%), Positives = 13/29 (44%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIV 100
            VL+ G  G  G H   R+L +     ++
Sbjct: 4   RVLLAGATGLTGEHLLDRILSEPTLAKVI 32

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 41.2 bits (96), Expect = 6e-05
 Identities = 23/142 (16%), Positives = 48/142 (33%), Gaps = 21/142 (14%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VL+TG A  IG        K+  R+   D          +  + +         +  D+ 
Sbjct: 8   VLITGAAHGIGRATLELFAKEGARLVACD---IEEGPLREAAEAV-----GAHPVVMDVA 59

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVG---ESTLDPLKYYHNITSN-----TLVV 179
           D  +V + F+E        D V+H+A +       +  L+  +    +            
Sbjct: 60  DPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAA 119

Query: 180 LESMARHGVDTLIYSSTCATYG 201
            E+M      +++ +++    G
Sbjct: 120 SEAMREKNPGSIVLTASRVYLG 141

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 41.0 bits (95), Expect = 8e-05
 Identities = 18/100 (18%), Positives = 40/100 (40%), Gaps = 11/100 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V+VTG    IG     +L+KD     I+   +R ++     L+ +  +  R+  +   + 
Sbjct: 6   VVVTGANRGIGLGLVQQLVKDKNIRHIIA-TAR-DVEKATELKSI--KDSRVHVLPLTVT 61

Query: 133 DAKAVNKF-------FSENAFDAVMHFAAVAYVGESTLDP 165
             K+++ F          +    +++ A V     +  +P
Sbjct: 62  CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEP 101

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 40.7 bits (95), Expect = 9e-05
 Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 8/95 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVD------NLSRGNIGAVKVLQELFPEPGRLQF 126
           VLVTG  G +G   AL   +    V + D       + +G+  A KV++E+    G+   
Sbjct: 10  VLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVA 69

Query: 127 IYADLGDAKAVNKFFSEN--AFDAVMHFAAVAYVG 159
            Y  +   + + K   +     D V++ A +    
Sbjct: 70  NYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDR 104

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 40.0 bits (93), Expect = 1e-04
 Identities = 16/97 (16%), Positives = 30/97 (30%), Gaps = 14/97 (14%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            +VT    + G  +ALRL +  + V   D        + K   EL  E     +      
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHDE-------SFKQKDEL--EAFAETYPQLKPM 53

Query: 133 DAKAVNKFFSE--NAF---DAVMHFAAVAYVGESTLD 164
             +   +      +A+   D ++     A   +    
Sbjct: 54  SEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDK 90

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.9 bits (92), Expect = 2e-04
 Identities = 32/146 (21%), Positives = 48/146 (32%), Gaps = 15/146 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR---GNIGAVKVLQELFPEPGRLQFIYA 129
           VL+TG +  IG H A+RL  D  +   V    R         +  + L   PG L+ +  
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYY--------HNITSNTLV--- 178
           D+ D+K+V           V      A +G                   N+     +   
Sbjct: 65  DVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQA 124

Query: 179 VLESMARHGVDTLIY-SSTCATYGEP 203
            L  M R G   ++   S     G P
Sbjct: 125 FLPDMKRRGSGRVLVTGSVGGLMGLP 150

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (91), Expect = 2e-04
 Identities = 5/28 (17%), Positives = 10/28 (35%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIV 100
           V + G +G  G      +L+      + 
Sbjct: 17  VFILGASGETGRVLLKEILEQGLFSKVT 44

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 39.6 bits (92), Expect = 2e-04
 Identities = 12/72 (16%), Positives = 26/72 (36%), Gaps = 1/72 (1%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           +V+     G IG   +  L+K + +  ++ +    N  A+  L+ + P+       Y   
Sbjct: 7   NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVE-NPTALAELKAINPKVNITFHTYDVT 65

Query: 132 GDAKAVNKFFSE 143
                  K   +
Sbjct: 66  VPVAESKKLLKK 77

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (91), Expect = 3e-04
 Identities = 28/181 (15%), Positives = 57/181 (31%), Gaps = 18/181 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            LVTGG   IG      L +     V +     R        +Q+L  E    +F   D+
Sbjct: 6   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTA---RDVTRGQAAVQQLQAEGLSPRFHQLDI 62

Query: 132 GDAKAVNKFFS-----ENAFDAVMHFAAVAYVGES-TLDPLKYYHNITSN-------TLV 178
            D +++              D +++ A +A+     T   ++    + +N          
Sbjct: 63  DDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTE 122

Query: 179 VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS 238
           +L  +   G    + SS  +        P  ++  ++      +   +    + D  K  
Sbjct: 123 LLPLIKPQGRVVNV-SSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGV 181

Query: 239 D 239
            
Sbjct: 182 H 182

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.0 bits (90), Expect = 3e-04
 Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 6/81 (7%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLV GG G +GS         ++ V  +D +      A  +++       +   + A   
Sbjct: 5   VLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTA--- 61

Query: 133 DAKAVNKFFSENAFDAVMHFA 153
               V K   +   DA++  A
Sbjct: 62  ---EVGKLLGDQKVDAILCVA 79

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 38.3 bits (88), Expect = 6e-04
 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 4/79 (5%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE-PGRLQFIYADL 131
            ++TGGA  IG   A+RL +  +RV +    S G   A +++ EL     G       DL
Sbjct: 4   AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEG--AAQRLVAELNAARAGSAVLCKGDL 61

Query: 132 GDAKAVNKFFSENAFDAVM 150
             + ++     E+  D   
Sbjct: 62  SLSSSLLDCC-EDIIDCSF 79

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.9 bits (87), Expect = 0.001
 Identities = 14/88 (15%), Positives = 31/88 (35%), Gaps = 2/88 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEP--GRLQFIYAD 130
            ++TG +   G   A +L +     +++   +R      ++ +EL  +    ++    AD
Sbjct: 9   CVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAAD 68

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYV 158
           LG    V +  S               +
Sbjct: 69  LGTEAGVQRLLSAVRELPRPEGLQRLLL 96

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 37.5 bits (86), Expect = 0.001
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVD 101
           V+V GG G +GS       K+ Y V  +D
Sbjct: 5   VIVYGGKGALGSAILEFFKKNGYTVLNID 33

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 36.4 bits (83), Expect = 0.002
 Identities = 17/88 (19%), Positives = 34/88 (38%), Gaps = 14/88 (15%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           ++++G A  IG+     L    +++  +D      I   +V+ +L    GR Q I     
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGID------IRDAEVIADLSTAEGRKQAI----- 52

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGE 160
            A  + K       D ++  A +    +
Sbjct: 53  -ADVLAKCS--KGMDGLVLCAGLGPQTK 77

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 36.3 bits (83), Expect = 0.003
 Identities = 13/69 (18%), Positives = 22/69 (31%), Gaps = 6/69 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG +  IG   A  L     +V           GA  +   L       + +  ++ 
Sbjct: 7   ALVTGASRGIGRAIAETLAARGAKVIGTA---TSENGAQAISDYL---GANGKGLMLNVT 60

Query: 133 DAKAVNKFF 141
           D  ++    
Sbjct: 61  DPASIESVL 69

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 36.3 bits (83), Expect = 0.003
 Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 15/80 (18%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTGGA  +G  AAL L    YRV ++D               L  E   L ++  D+ 
Sbjct: 4   ALVTGGASGLGRAAALALKARGYRVVVLD---------------LRREGEDLIYVEGDVT 48

Query: 133 DAKAVNKFFSENAFDAVMHF 152
             + V +  +    +A +  
Sbjct: 49  REEDVRRAVARAQEEAPLFA 68

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (83), Expect = 0.003
 Identities = 16/72 (22%), Positives = 25/72 (34%), Gaps = 4/72 (5%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
           V+VTG +  IG   A  L K    V +     R      KV+            +I   +
Sbjct: 17  VIVTGASKGIGREMAYHLAKMGAHVVVTA---RSKETLQKVVSHCLELGAASAHYIAGTM 73

Query: 132 GDAKAVNKFFSE 143
            D     +F ++
Sbjct: 74  EDMTFAEQFVAQ 85

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 36.1 bits (82), Expect = 0.003
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 1/81 (1%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNI-GAVKVLQELFPEPGRLQFIYADL 131
           VLVTGG G +G   A  L +      ++ + S  +  GA +++ EL     R      D+
Sbjct: 12  VLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDV 71

Query: 132 GDAKAVNKFFSENAFDAVMHF 152
            D ++V +       D  +  
Sbjct: 72  TDRESVRELLGGIGDDVPLSA 92

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 35.8 bits (82), Expect = 0.003
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVD 101
           VLV   +  IG   A  L ++   VTI  
Sbjct: 7   VLVLAASRGIGRAVADVLSQEGAEVTICA 35

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.0 bits (82), Expect = 0.004
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVD 101
            ++TGGA  +G   A RL+       ++D
Sbjct: 8   AVITGGASGLGLATAERLVGQGASAVLLD 36

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 35.7 bits (81), Expect = 0.004
 Identities = 17/101 (16%), Positives = 35/101 (34%), Gaps = 6/101 (5%)

Query: 73  VLVTGGAGY--IGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
           +LVTG A    I    A  + ++   +         N      ++E   + G    +  D
Sbjct: 8   ILVTGVASKLSIAYGIAQAMHREGAELAFTYQ----NDKLKGRVEEFAAQLGSDIVLQCD 63

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHN 171
           + +  +++  F+E           V  +G +  D L   + 
Sbjct: 64  VAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYV 104

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (81), Expect = 0.004
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVD 101
           +++T  A  IG  AAL   ++  +V   D
Sbjct: 9   IILTAAAQGIGQAAALAFAREGAKVIATD 37

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 35.8 bits (81), Expect = 0.004
 Identities = 17/92 (18%), Positives = 25/92 (27%), Gaps = 2/92 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG A  +G   A  L  + Y V +  +  R    A  +   L               
Sbjct: 5   ALVTGAAKRLGRSIAEGLHAEGYAVCLHYH--RSAAEANALSATLNARRPNSAITVQADL 62

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLD 164
              A       +    V  F   A +  +   
Sbjct: 63  SNVATAPVSGADGSAPVTLFTRCAELVAACYT 94

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 35.5 bits (80), Expect = 0.004
 Identities = 15/72 (20%), Positives = 27/72 (37%), Gaps = 1/72 (1%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TG    +G      LL        +    R N    K L++L      +  +  DL 
Sbjct: 5   ILITGCNRGLGLGLVKALLNLPQPPQHLFTTCR-NREQAKELEDLAKNHSNIHILEIDLR 63

Query: 133 DAKAVNKFFSEN 144
           +  A +K  ++ 
Sbjct: 64  NFDAYDKLVADI 75

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	296
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.98
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.97
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.97
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.97
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.97
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.97
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.97
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.97
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.96
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.96
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.96
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.96
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.96
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.96
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.96
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.96
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.96
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.96
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.96
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.96
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.96
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.96
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.96
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.96
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.96
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.96
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.96
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.96
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.96
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.96
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.96
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.96
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.96
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.96
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.96
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.96
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.96
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.96
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.96
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.96
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.96
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.96
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.95
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.95
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.95
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.95
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.95
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.95
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.95
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.95
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.95
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.95
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.94
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.94
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.94
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.94
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.94
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.94
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.94
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.94
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.93
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.93
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.93
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.93
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.93
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.93
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.93
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.92
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.92
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.91
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.91
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.91
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.9
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.89
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.89
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.88
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.88
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.86
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.86
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.85
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.85
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.82
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.82
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.8
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.8
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.79
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.77
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.72
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.63
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.58
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.46
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.39
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.36
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.33
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.28
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	98.22
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.19
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	98.15
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	98.11
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.11
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.1
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	98.1
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.09
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	98.06
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.97
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.96
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.9
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.89
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.88
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.88
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.81
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.81
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.78
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.78
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.75
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.72
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.71
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.67
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.67
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.64
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.63
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.59
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.53
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.53
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.52
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.48
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.48
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.48
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.45
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.42
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.39
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.36
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.35
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.34
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.32
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.32
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.3
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.29
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.27
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.24
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.21
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.17
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.09
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.09
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.08
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.05
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.03
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.02
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.0
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.93
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.92
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.87
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.78
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	96.78
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.75
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	96.74
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.71
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.7
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.68
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.64
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.62
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.6
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.51
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.44
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.4
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	96.37
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	96.36
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	96.3
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.26
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.21
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	96.19
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.12
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	96.1
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	96.02
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.98
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.97
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	95.94
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.88
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.85
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	95.82
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	95.82
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	95.8
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.78
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.73
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	95.72
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	95.71
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	95.7
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.57
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	95.55
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	95.44
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	95.4
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	95.36
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	95.3
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	95.29
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.25
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.23
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	95.19
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	95.18
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	95.16
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.15
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.14
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.07
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	94.99
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	94.97
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	94.96
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.94
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.88
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	94.87
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.86
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.63
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	94.63
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.59
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	94.54
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	94.53
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	94.35
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.34
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	94.28
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	94.21
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	94.2
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	94.2
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	93.96
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	93.93
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	93.91
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.81
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	93.81
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	93.56
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	93.5
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	93.41
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	93.38
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	93.27
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.05
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	93.03
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	93.02
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	92.98
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	92.91
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	92.81
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	92.72
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	92.67
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	92.66
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	92.52
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	92.46
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	92.26
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	92.24
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	92.23
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	92.17
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	92.1
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	91.57
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	91.54
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	91.54
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	91.52
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	91.51
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	91.47
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	91.3
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	91.3
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	91.21
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	90.88
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	90.75
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	90.75
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	90.73
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	90.7
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	90.51
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	90.46
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	90.43
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	90.4
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	90.29
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	90.11
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	89.96
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.57
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	89.57
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	89.39
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	89.36
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	89.06
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	88.95
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	88.79
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	88.76
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	88.54
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	88.39
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	88.21
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	88.14
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	88.06
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	87.97
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	87.83
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	87.53
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	87.49
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	87.49
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	87.42
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	87.39
d1vkza2	90	Glycinamide ribonucleotide synthetase (GAR-syn), N	87.31
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	87.27
d2afhe1	289	Nitrogenase iron protein {Azotobacter vinelandii [	87.22
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	87.13
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	86.99
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	86.8
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	86.68
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	86.56
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	86.47
d1jyea_	271	Lac-repressor (lacR) core (C-terminal domain) {Esc	86.3
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	86.07
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	85.87
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	85.77
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	85.75
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	85.44
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	85.25
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	84.78
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	84.51
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	84.16
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	83.87
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	83.68
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	83.68
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	83.56
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	83.29
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	82.91
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	82.49
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	82.38
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	82.26
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	82.06
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	81.87
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	81.69
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	81.55
d1rzua_	477	Glycogen synthase 1, GlgA {Agrobacterium tumefacie	81.55
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	81.36
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	81.3
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	80.89
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	80.78
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	80.62
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	80.62
d1ej0a_	180	RNA methyltransferase FtsJ {Escherichia coli [TaxI	80.6
d1uwva2	358	rRNA (Uracil-5-)-methyltransferase RumA, catalytic	80.36
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	80.28
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	80.08

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.3e-34  Score=260.61  Aligned_cols=185  Identities=25%  Similarity=0.269  Sum_probs=155.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc--chhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN--IGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      |+||||||||+||++|+++|+++|++|++++|.....  ...............+++++++|++|.++++++++..++|+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence            8899999999999999999999999999999854321  11111111111223589999999999999999998778899


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCC---CEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHH
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV---DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKK  225 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~---~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~  225 (296)
                      |||+|+........+++...+++|+.||.++++++++.+.   .||||+||+++||.....+++|+.+..|.++|+.||.
T Consensus        82 v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~  161 (357)
T d1db3a_          82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKL  161 (357)
T ss_dssp             EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHH
T ss_pred             EEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHHH
Confidence            9999999888778889999999999999999999998764   4799999999999888889999999999999999999


Q ss_pred             HHHHHHHHhhhcCCCcEEEEecCeeecCCC
Q 022471          226 MAEDIILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       226 ~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                      ++|.+++.++++++++++++||++||||+.
T Consensus       162 ~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~  191 (357)
T d1db3a_         162 YAYWITVNYRESYGMYACNGILFNHESPRR  191 (357)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECCEECTTS
T ss_pred             HHHHHHHHHHHHhCCCEEEEEeccccCCCC
Confidence            999999999998999999999999999974

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.4e-33  Score=251.92  Aligned_cols=216  Identities=35%  Similarity=0.625  Sum_probs=180.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+|||||||||||++|++.|+++|++|++++|..+.........+...  ..++.++++|++|.+.+.++++..++|+||
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi   78 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALMTEILHDHAIDTVI   78 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH--TSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhc--CCCCEEEEeecCCHHHHHHHHhccCCCEEE
Confidence            569999999999999999999999999999986655444434333332  257899999999999999999877899999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCC-CCCCCChHHHHHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET-PQAPINPYGKAKKMAED  229 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~-~~~~~~~Y~~sK~~~e~  229 (296)
                      |+|+....+.+.+++.+.+++|+.||.++++++++.+++++|++||.++|+.....+..|+. ...|..+|+.+|.++|.
T Consensus        79 HlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~  158 (338)
T d1udca_          79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQ  158 (338)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHH
T ss_pred             ECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhH
Confidence            99998766666778889999999999999999999999999999999999877665555544 45689999999999999


Q ss_pred             HHHHhhhc-CCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCCcceEE
Q 022471          230 IILDFSKN-SDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVC  291 (296)
Q Consensus       230 ~~~~~~~~-~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  291 (296)
                      ++.++..+ .+++++++||++||||++....+..+.....   .+++.+++.+..+.+.+.++
T Consensus       159 ~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~---~l~~~~~~~~~~~~~~i~i~  218 (338)
T d1udca_         159 ILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPN---NLMPYIAQVAVGRRDSLAIF  218 (338)
T ss_dssp             HHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCC---SHHHHHHHHHTTSSSCEEEE
T ss_pred             HHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHH---HHHHHHHHHHhcCCCCEEEe
Confidence            99876655 6899999999999999988777766554332   79999999998877656653

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.2e-32  Score=246.52  Aligned_cols=215  Identities=40%  Similarity=0.644  Sum_probs=178.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+|||||||||||++|+++|+++|++|+++++..+.............  ..+++++.+|++|.++++++++..++|+||
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi   79 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT--KHHIPFYEVDLCDRKGLEKVFKEYKIDSVI   79 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH--TSCCCEEECCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhc--ccCCeEEEeecCCHHHHHHHHhccCCCEEE
Confidence            789999999999999999999999999999876555443333333322  257889999999999999998777899999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCC----CCCCCCCCCCCCCChHHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPE----KMPITEETPQAPINPYGKAKKM  226 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~----~~~~~e~~~~~~~~~Y~~sK~~  226 (296)
                      |+|+........+.+...+.+|+.++.++++++++.+++++|++||..+||...    ..+++|+.+..|.++|+.||.+
T Consensus        80 hlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~  159 (347)
T d1z45a2          80 HFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYA  159 (347)
T ss_dssp             ECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHH
T ss_pred             EccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHH
Confidence            999987666667788889999999999999999999999999999999998653    3457888888899999999999


Q ss_pred             HHHHHHHhhhc--CCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCCcceE
Q 022471          227 AEDIILDFSKN--SDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKV  290 (296)
Q Consensus       227 ~e~~~~~~~~~--~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  290 (296)
                      +|.+++.+.+.  .+++++++||++|||+.+...+|.......   ..+++.+.+.+......+.+
T Consensus       160 ~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~i~i  222 (347)
T d1z45a2         160 IENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIP---NNLLPYMAQVAVGRREKLYI  222 (347)
T ss_dssp             HHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSC---CSHHHHHHHHHTTSSSCCCC
T ss_pred             HHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccH---HHHHHHHHHHHhcCCCCeEE
Confidence            99999998653  789999999999999998877776554332   37899988888776554544

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=3.4e-32  Score=242.94  Aligned_cols=209  Identities=25%  Similarity=0.336  Sum_probs=177.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCC--CCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP--EPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      |+||||||||+||++|+++|.++|++|++++|.........+.+.....  ...++.++.+|+.|...+....  ..+|.
T Consensus        17 k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~--~~~~~   94 (341)
T d1sb8a_          17 KVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC--AGVDY   94 (341)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH--TTCSE
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccc--ccccc
Confidence            8999999999999999999999999999999865544433333322211  1246889999999999888777  67899


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e  228 (296)
                      ++|+++......+.+++...+++|+.|+.++++++.+.+.+++|++||.++||.....+++|+.+..|.+.|+.||.++|
T Consensus        95 v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E  174 (341)
T d1sb8a_          95 VLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNE  174 (341)
T ss_dssp             EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHH
T ss_pred             cccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHHH
Confidence            99999877666677788899999999999999999999999999999999999988889999999999999999999999


Q ss_pred             HHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCCcceEE
Q 022471          229 DIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVC  291 (296)
Q Consensus       229 ~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  291 (296)
                      .+++.+++..+++++++||++||||+......         ...+++.+++.+..|+| +.++
T Consensus       175 ~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~---------~~~~i~~~~~~~~~g~~-i~~~  227 (341)
T d1sb8a_         175 LYADVFSRCYGFSTIGLRYFNVFGRRQDPNGA---------YAAVIPKWTSSMIQGDD-VYIN  227 (341)
T ss_dssp             HHHHHHHHHHCCCCEEEEECCEECTTCCCCST---------TCCHHHHHHHHHHHTCC-CEEE
T ss_pred             HHHHHHHHHhCCCeEEEEeceeeccCcCCCCc---------hhhhHHHHHHHHHcCCc-eEEc
Confidence            99999998899999999999999998643211         12789999999999988 5543

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=1.5e-32  Score=247.58  Aligned_cols=204  Identities=24%  Similarity=0.347  Sum_probs=165.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEE-EecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTI-VDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      |+||||||||+||++|+++|+++|++|++ +++......  .+.+.... ...+++++.+|++|.+.+.++++..++|+|
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~--~~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~V   77 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN--LESLSDIS-ESNRYNFEHADICDSAEITRIFEQYQPDAV   77 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC--GGGGTTTT-TCTTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcccc--HHHHHhhh-hcCCcEEEEccCCCHHHHHHHHHhCCCCEE
Confidence            57999999999999999999999998554 554332211  12222222 236899999999999999999977789999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcC---------CCEEEEEcccccccCCCCCC----------CCC
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG---------VDTLIYSSTCATYGEPEKMP----------ITE  210 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~---------~~riV~~SS~~~~g~~~~~~----------~~e  210 (296)
                      ||+|+......+..++...+++|+.||.++++++++.+         .++||++||.++||.....+          ..|
T Consensus        78 ihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e  157 (361)
T d1kewa_          78 MHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTE  157 (361)
T ss_dssp             EECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCT
T ss_pred             EECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCccc
Confidence            99999877666677888999999999999999998754         35999999999998654322          234


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCCcceE
Q 022471          211 ETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKV  290 (296)
Q Consensus       211 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  290 (296)
                      ..+..|.++|+.||.++|.+++.++++++++++++||++||||++...             .+++.+++++..++| +.+
T Consensus       158 ~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~-------------~~i~~~i~~~~~g~~-~~v  223 (361)
T d1kewa_         158 TTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE-------------KLIPLVILNALEGKP-LPI  223 (361)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-------------SHHHHHHHHHHHTCC-EEE
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcC-------------cHHHHHHHHHHcCCC-cEE
Confidence            566778999999999999999999998999999999999999975321             789999999999998 444


Q ss_pred             E
Q 022471          291 C  291 (296)
Q Consensus       291 ~  291 (296)
                      +
T Consensus       224 ~  224 (361)
T d1kewa_         224 Y  224 (361)
T ss_dssp             E
T ss_pred             e
Confidence            3

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=2e-31  Score=236.23  Aligned_cols=202  Identities=26%  Similarity=0.368  Sum_probs=170.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCe------EEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYR------VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSEN  144 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~  144 (296)
                      |+||||||||+||++++++|+++|++      |+.+++.......  ..+.... ...++.++.+|+++........  .
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~--~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~--~   75 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR--ANLAPVD-ADPRLRFVHGDIRDAGLLAREL--R   75 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG--GGGGGGT-TCTTEEEEECCTTCHHHHHHHT--T
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccH--hHhhhhh-cCCCeEEEEeccccchhhhccc--c
Confidence            57999999999999999999999985      4445543222211  1112221 2367999999999999888776  6


Q ss_pred             CCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHH
Q 022471          145 AFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAK  224 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK  224 (296)
                      .+|.|+|+|+.........++.+.+++|+.++.++++++++.+.+++|++||+++||.....+++|+.+..|.++|+.||
T Consensus        76 ~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK  155 (322)
T d1r6da_          76 GVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASK  155 (322)
T ss_dssp             TCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHH
T ss_pred             ccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHH
Confidence            79999999998776666677888999999999999999999999999999999999998888999999999999999999


Q ss_pred             HHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCCcceEE
Q 022471          225 KMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVC  291 (296)
Q Consensus       225 ~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  291 (296)
                      .++|.+++.++++++++++++||++||||++...             .+++.+++++..+++ +.++
T Consensus       156 ~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~-------------~~i~~~i~~~~~~~~-i~v~  208 (322)
T d1r6da_         156 AGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE-------------KLIPLFVTNLLDGGT-LPLY  208 (322)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT-------------SHHHHHHHHHHTTCC-EEEE
T ss_pred             HHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcC-------------cHHHHHHHHHHcCCC-cEEe
Confidence            9999999999999999999999999999985421             789999999999987 5543

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.4e-33  Score=244.02  Aligned_cols=193  Identities=29%  Similarity=0.462  Sum_probs=156.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+||||||+|+||++++++|+++|++|+++++......+...   ... ...+++....|+.+     .++  .++|+||
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~---~~~-~~~~~d~~~~~~~~-----~~~--~~~d~Vi   70 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE---HWI-GHENFELINHDVVE-----PLY--IEVDQIY   70 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTG---GGT-TCTTEEEEECCTTS-----CCC--CCCSEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHH---Hhc-CCCceEEEehHHHH-----HHH--cCCCEEE
Confidence            899999999999999999999999999999875443322221   111 12455555555543     344  4799999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCC-----CCCCCCChHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE-----TPQAPINPYGKAKK  225 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~-----~~~~~~~~Y~~sK~  225 (296)
                      |+|+......+..++.+.+++|+.++.++++++++.+. ++||+||.++|+.....+++|+     .|..|.++|+.||.
T Consensus        71 hlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~  149 (312)
T d2b69a1          71 HLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKR  149 (312)
T ss_dssp             ECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHH
T ss_pred             ECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHH
Confidence            99998776566678889999999999999999999886 8999999999998766666654     45678899999999


Q ss_pred             HHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          226 MAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       226 ~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      ++|.+++.+++++|++++++||++||||++...           .+.+++.+++.+..+++
T Consensus       150 ~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~-----------~~~~i~~~i~~~~~g~~  199 (312)
T d2b69a1         150 VAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN-----------DGRVVSNFILQALQGEP  199 (312)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECCEECTTCCTT-----------CCCHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCC-----------CccHHHHHHHHHHcCCC
Confidence            999999999998999999999999999985421           12789999999988887

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1e-31  Score=240.02  Aligned_cols=207  Identities=24%  Similarity=0.241  Sum_probs=165.2

Q ss_pred             cEE-EEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc--chhhhhhhhh-CCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 022471           71 THV-LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN--IGAVKVLQEL-FPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (296)
Q Consensus        71 k~v-lVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~--~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (296)
                      ||| ||||||||||++|+++|+++||+|++++|.....  .......... .....+++++.+|++|.+.+.+++...++
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   80 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP   80 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence            456 9999999999999999999999999999864321  1111111111 01124789999999999999999988889


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCC---CEEEEEcccccccCCCCCCCCCCCCCCCCChHHHH
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV---DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKA  223 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~---~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~s  223 (296)
                      ++++|+|+........+.+...+++|+.||.++++++++.+.   +++|++||+++||.....+++|+.+..|.++|+.|
T Consensus        81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~s  160 (347)
T d1t2aa_          81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAA  160 (347)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHH
T ss_pred             ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHH
Confidence            999999998776666778888899999999999999998764   48999999999998888889999999999999999


Q ss_pred             HHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          224 KKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       224 K~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      |.++|++++.++++++++++++||++||||+.....      .   ...+...++....++.+
T Consensus       161 K~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~------~---~~~~~~~i~~~~~~~~~  214 (347)
T d1t2aa_         161 KLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANF------V---TRKISRSVAKIYLGQLE  214 (347)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTS------H---HHHHHHHHHHHHHTSCS
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCc------c---ccccceeeehhhcCCcc
Confidence            999999999998889999999999999999743210      0   11455555666665555

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.97  E-value=3.9e-30  Score=229.98  Aligned_cols=199  Identities=23%  Similarity=0.303  Sum_probs=157.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      ||+||||||||+||++|+++|+++|++|.++.++..........+....  +.++.++.+|++|.+.+.+++  .+.|.+
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~--~~~i~~~~~Di~d~~~~~~~~--~~~~~v   77 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL--GDRVELVVGDIADAELVDKLA--AKADAI   77 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGC--SSSEEEEECCTTCHHHHHHHH--TTCSEE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhh--cCCeEEEEccCCCHHHHHHHH--hhhhhh
Confidence            6999999999999999999999999875544432111111111112221  358999999999999999998  578999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCC------------CCCCCCCCCCCCCC
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEP------------EKMPITEETPQAPI  217 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~------------~~~~~~e~~~~~~~  217 (296)
                      +|+|+......+..++.+.+++|+.|+.++++++.+.+. ++|++||..+||..            ....++|+.+..|.
T Consensus        78 ~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~-k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~  156 (346)
T d1oc2a_          78 VHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPS  156 (346)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCC
T ss_pred             hhhhhcccccchhhCcccceeeehHhHHhhhhhhccccc-cccccccceEecccCccccccccccCcccccccCCCCCCC
Confidence            999998776666678889999999999999999999884 89999999999742            12345666777889


Q ss_pred             ChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          218 NPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      +.|+.+|.++|.+++.++++++++++++||++||||+....             ..+..++..+..+.+
T Consensus       157 s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~-------------~~~~~~i~~~~~~~~  212 (346)
T d1oc2a_         157 SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-------------KFIPRQITNILAGIK  212 (346)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-------------SHHHHHHHHHHHTCC
T ss_pred             CHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCcc-------------chhHHHHHHHHcCCc
Confidence            99999999999999999988999999999999999975321             566776666666666

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.97  E-value=5.1e-30  Score=226.44  Aligned_cols=182  Identities=25%  Similarity=0.247  Sum_probs=158.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+||||||||+||++++++|+++||+|++++|......  .+.++.+.. ..++.++.+|++|.+.+.+++....+++++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~l~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~   77 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT--RWRLRELGI-EGDIQYEDGDMADACSVQRAVIKAQPQEVY   77 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC--CHHHHHTTC-GGGEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCccc--HHHHHHhcc-cCCcEEEEccccChHHhhhhhccccccccc
Confidence            68999999999999999999999999999998654322  122333322 257899999999999999998877889999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~  229 (296)
                      |+|+.........++.+.++.|+.|+.++++++++.+.+ +++++||..+|+.....+.+|+.+..|.++|+.||.++|.
T Consensus        78 ~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  157 (321)
T d1rpna_          78 NLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHW  157 (321)
T ss_dssp             ECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             cccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHH
Confidence            999887776677788899999999999999999998854 7888999999988888888999999999999999999999


Q ss_pred             HHHHhhhcCCCcEEEEecCeeecCCC
Q 022471          230 IILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       230 ~~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                      +++.++.+++++++++||+++|||..
T Consensus       158 ~~~~~~~~~~~~~~~lr~~~vyGp~~  183 (321)
T d1rpna_         158 ITVNYRESFGLHASSGILFNHESPLR  183 (321)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEECTTS
T ss_pred             HHHHHHhhcCCcEEEEEEecccCCCc
Confidence            99999988999999999999999964

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.6e-29  Score=224.41  Aligned_cols=216  Identities=37%  Similarity=0.611  Sum_probs=174.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC------cchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG------NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSEN  144 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~  144 (296)
                      ||||||||||+||++|+++|+++|++|+++++....      .....+.++...  ..++.++.+|++|.+.+++++...
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~l~~~~~~~   80 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT--GRSVEFEEMDILDQGALQRLFKKY   80 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH--TCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhc--CCCcEEEEeecccccccccccccc
Confidence            789999999999999999999999999999863322      122222222222  357899999999999999998888


Q ss_pred             CCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCC-CCCCCCCChHHHH
Q 022471          145 AFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITE-ETPQAPINPYGKA  223 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e-~~~~~~~~~Y~~s  223 (296)
                      ++|+++|+||.........++.+.++.|+.+|.++++++++.+++++|++||+.+|+........+ .....+.++|+.+
T Consensus        81 ~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~  160 (346)
T d1ek6a_          81 SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKS  160 (346)
T ss_dssp             CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHH
T ss_pred             ccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCChHHHH
Confidence            899999999987766677788899999999999999999999999999999999998765443333 3345678899999


Q ss_pred             HHHHHHHHHHhhhc-CCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCCcceEE
Q 022471          224 KKMAEDIILDFSKN-SDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVC  291 (296)
Q Consensus       224 K~~~e~~~~~~~~~-~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  291 (296)
                      |..+|..++.+++. .++..+++||+++|||+....++.......   ..+++.+...+......++++
T Consensus       161 k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~i~  226 (346)
T d1ek6a_         161 KFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIP---NNLMPYVSQVAIGRREALNVF  226 (346)
T ss_dssp             HHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSC---CSHHHHHHHHHHTSSSCEEEE
T ss_pred             HHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccH---HHHHHHHHHHHHcCCCcEEEc
Confidence            99999999988765 699999999999999998777766655433   278888888887766656653

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.97  E-value=3e-30  Score=221.73  Aligned_cols=172  Identities=17%  Similarity=0.185  Sum_probs=141.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||++|||+++|+.|+++|++|++++|+....++..+.+.+... +.++.++++|++|.+++++++++     +
T Consensus         4 gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~-~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   82 (258)
T d1iy8a_           4 DRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAP-DAEVLTTVADVSDEAQVEAYVTATTERFG   82 (258)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCT-TCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCC-CCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            39999999999999999999999999999999877666655555555433 35788999999999999988866     7


Q ss_pred             CCcEEEEcccccCc-CC----CCcChHHHHHHHHHHH----HHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYV-GE----STLDPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~-~~----~~~~~~~~~~~n~~~t----~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||+... .+    ..+++++.+++|+.++    +.+++.|++++.++||++||.+.+           .+.+
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~-----------~~~~  151 (258)
T d1iy8a_          83 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGI-----------RGIG  151 (258)
T ss_dssp             CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT-----------SBCS
T ss_pred             CCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhc-----------cCCC
Confidence            89999999997532 22    3345566788999984    446677777788899999998765           2344


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGS  253 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp  253 (296)
                      ...+|+.||.+.+.+++.++.|   +||++++|.||.|..|
T Consensus       152 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~  192 (258)
T d1iy8a_         152 NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTP  192 (258)
T ss_dssp             SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCH
Confidence            5789999999999999999988   7899999999999775

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.97  E-value=8.1e-30  Score=217.73  Aligned_cols=171  Identities=16%  Similarity=0.157  Sum_probs=138.1

Q ss_pred             CCCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc---
Q 022471           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (296)
Q Consensus        67 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (296)
                      +.+ |++|||||++|||+++|+.|+++|++|++++|++.  ++..+.+++.   +.++.++++|++|.+++++++++   
T Consensus         3 L~g-KvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~--~~~~~~~~~~---g~~~~~~~~Dvs~~~~v~~~~~~~~~   76 (247)
T d2ew8a1           3 LKD-KLAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIRNL---GRRVLTVKCDVSQPGDVEAFGKQVIS   76 (247)
T ss_dssp             TTT-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCch--HHHHHHHHHc---CCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            344 99999999999999999999999999999998653  3333444443   46789999999999999988865   


Q ss_pred             --CCCcEEEEcccccCcCC----CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCC
Q 022471          144 --NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (296)
Q Consensus       144 --~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~  213 (296)
                        +++|++|||||+....+    ..+++++.+++|+.+    ++.+++.|++++.++||++||.+..           .+
T Consensus        77 ~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~-----------~~  145 (247)
T d2ew8a1          77 TFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYW-----------LK  145 (247)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGG-----------SC
T ss_pred             HcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhc-----------cc
Confidence              78999999999866544    344556678889888    5557788888888899999998765           33


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       214 ~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      .+...+|++||++.+.+++.++.|   +||++++|.||.|..|.
T Consensus       146 ~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~  189 (247)
T d2ew8a1         146 IEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTAT  189 (247)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----
T ss_pred             CcccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCcc
Confidence            445789999999999999999988   78999999999998775

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.97  E-value=3.1e-30  Score=220.82  Aligned_cols=171  Identities=13%  Similarity=0.066  Sum_probs=140.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||++|||+++|++|+++|++|++++|+....+++.+++++   .+.++.++.+|++|.+++++++++     +
T Consensus        10 nKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~---~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g   86 (251)
T d2c07a1          10 NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKS---FGYESSGYAGDVSKKEEISEVINKILTEHK   86 (251)
T ss_dssp             SCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHT---TTCCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            49999999999999999999999999999999876555555555543   346789999999999999988876     7


Q ss_pred             CCcEEEEcccccCcCCCC----cChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~~----~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|++|||||........    +++.+.+++|+.+    ++.+++.|++++.++||++||.+.+           .+.+.
T Consensus        87 ~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~-----------~~~~~  155 (251)
T d2c07a1          87 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGL-----------TGNVG  155 (251)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHH-----------HCCTT
T ss_pred             CceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhc-----------CCCCC
Confidence            999999999986654433    4445567788888    4557778888888899999998765           23445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..+|+.||++.+.+++.++.|   +||++++|.||.|..+.
T Consensus       156 ~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~  196 (251)
T d2c07a1         156 QANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDM  196 (251)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccc
Confidence            779999999999999999988   79999999999998875

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=4.2e-30  Score=220.45  Aligned_cols=172  Identities=14%  Similarity=0.160  Sum_probs=142.5

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|++|||||++|||+++|++|+++|++|++++|+..+.+++.+++++.   +.++.++++|++|.+++++++++     
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~---g~~~~~~~~Dvs~~~~~~~~~~~~~~~~   86 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL---GGQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc---CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3499999999999999999999999999999998766656565555543   46789999999999999988766     


Q ss_pred             CCCcEEEEcccccCcCC---CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE---STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      +++|++|||||......   +.+++++.+++|+.+    ++.+++.|++++.++||++||.+.+           .+.+.
T Consensus        87 g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~-----------~~~~~  155 (255)
T d1fmca_          87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAE-----------NKNIN  155 (255)
T ss_dssp             SSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-----------CCCTT
T ss_pred             CCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchh-----------ccccc
Confidence            78999999999865543   334455577889888    4456777788887899999997765           34455


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..+|+.||++.+.+++.++.|   +||+|++|.||.|..+.
T Consensus       156 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~  196 (255)
T d1fmca_         156 MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDA  196 (255)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHH
T ss_pred             cccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChH
Confidence            789999999999999999988   79999999999997764

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.96  E-value=6e-30  Score=220.27  Aligned_cols=172  Identities=16%  Similarity=0.038  Sum_probs=139.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC-CcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR-GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      +|++|||||++|||+++|++|+++|++|++++|+.. ..++..+.+.+..  +.++.++++|++|.+++++++++     
T Consensus         4 gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           4 GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH--GVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH--TSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            499999999999999999999999999999998642 2333333333322  35788999999999999998876     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +++|+||||||+....+    ..+++.+.+++|+.+    ++.+++.|++++.++||++||.+.+           .+.+
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~-----------~~~~  150 (260)
T d1x1ta1          82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGL-----------VASA  150 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-----------SCCT
T ss_pred             CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccce-----------eccC
Confidence            78999999999876554    334455577888888    5567888888888899999998775           3345


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...+|+.||++.+.+++.++.|   +||++++|.||.|-.|.
T Consensus       151 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~  192 (260)
T d1x1ta1         151 NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPL  192 (260)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--
T ss_pred             CcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChh
Confidence            5789999999999999999988   79999999999998775

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.96  E-value=8.4e-30  Score=216.99  Aligned_cols=171  Identities=15%  Similarity=0.157  Sum_probs=139.1

Q ss_pred             CCCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc---
Q 022471           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (296)
Q Consensus        67 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (296)
                      +.+ |++|||||++|||+++|+.|+++|++|++++|++.+.+++.   +++   +.++.++++|++|.+++++++++   
T Consensus         4 L~g-K~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~---~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~   76 (244)
T d1nffa_           4 LTG-KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMA---AEL---ADAARYVHLDVTQPAQWKAAVDTAVT   76 (244)
T ss_dssp             TTT-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HHT---GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH---HHh---hCcceEEEeecCCHHHHHHHHHHHHH
Confidence            344 99999999999999999999999999999998654433333   333   24678899999999999988866   


Q ss_pred             --CCCcEEEEcccccCcCCCC----cChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCC
Q 022471          144 --NAFDAVMHFAAVAYVGEST----LDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (296)
Q Consensus       144 --~~~D~vi~~Ag~~~~~~~~----~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~  213 (296)
                        +++|++|||||.....+.+    +++.+.+++|+.+    ++.+++.|++++.++||++||...+           .+
T Consensus        77 ~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~-----------~~  145 (244)
T d1nffa_          77 AFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGL-----------AG  145 (244)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-----------SC
T ss_pred             HhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccc-----------cc
Confidence              7899999999986655433    3445577889888    4456777788877899999998775           33


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       214 ~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      .+...+|+.||++.+.+++.++.|   +||++++|.||.|..|..
T Consensus       146 ~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~  190 (244)
T d1nffa_         146 TVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMT  190 (244)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGG
T ss_pred             cccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhH
Confidence            445789999999999999999988   799999999999988763

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.96  E-value=9e-30  Score=219.09  Aligned_cols=170  Identities=16%  Similarity=0.121  Sum_probs=139.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||++|||+++|+.|+++|++|++++|+....+++.+.+++   .+.++.++.+|++|.+++++++++     +
T Consensus         5 gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~---~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (260)
T d1zema1           5 GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVRE---KGVEARSYVCDVTSEEAVIGTVDSVVRDFG   81 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT---TTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            39999999999999999999999999999999876555555555443   356789999999999999988876     7


Q ss_pred             CCcEEEEcccccCc-CC----CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYV-GE----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~-~~----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|++|||||.... .+    ..+++...+++|+.+    ++.+++.|++++.++||++||.+.+           .+.+
T Consensus        82 ~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~-----------~~~~  150 (260)
T d1zema1          82 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGV-----------KGPP  150 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH-----------SCCT
T ss_pred             CCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhc-----------cCCc
Confidence            89999999997533 33    334455577788888    5556777777788899999998776           3344


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGS  253 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp  253 (296)
                      ...+|+.||++.+.+++.++.|   +||++++|.||.|..+
T Consensus       151 ~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~  191 (260)
T d1zema1         151 NMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG  191 (260)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCc
Confidence            5679999999999999999988   7899999999999876

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.96  E-value=1.3e-29  Score=216.84  Aligned_cols=173  Identities=14%  Similarity=0.091  Sum_probs=139.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||++|||+++|+.|+++|++|++++|+..+.++..+.+.+..  +.++.++++|++|.+++++++++     +
T Consensus         5 gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (251)
T d1vl8a_           5 GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY--GVETMAFRCDVSNYEEVKKLLEAVKEKFG   82 (251)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--CCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh--CCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4999999999999999999999999999999987665555554443332  35788999999999999988876     7


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||+....+    ..+++++.+++|+.+    ++.+++.|++++.++||++||....          ..+.+.
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~----------~~~~~~  152 (251)
T d1vl8a_          83 KLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVE----------EVTMPN  152 (251)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGT----------CCCSSS
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhc----------cccCcc
Confidence            8999999999865544    334445567789888    5557777877888899999986543          112334


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..+|+.||++.+.+++.++.|   +||++++|.||.|-.+.
T Consensus       153 ~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~  193 (251)
T d1vl8a_         153 ISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKM  193 (251)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTT
T ss_pred             ccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHH
Confidence            678999999999999999988   79999999999998875

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.96  E-value=7.4e-30  Score=218.60  Aligned_cols=167  Identities=17%  Similarity=0.129  Sum_probs=137.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||++|||+++|++|+++|++|++++|+..+   +.+.++++   +.++.++++|++|.+++++++++     +
T Consensus         5 gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~---~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (254)
T d1hdca_           5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEE---GAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEFG   78 (254)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHh---CCceEEEEcccCCHHHHHHHHHHHHHHcC
Confidence            4999999999999999999999999999999976533   33333333   35788999999999999988866     7


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||.....+    ..+++.+.+++|+.+    ++.+++.|++++.++||++||.+.+           .+.+.
T Consensus        79 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~-----------~~~~~  147 (254)
T d1hdca_          79 SVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGL-----------MGLAL  147 (254)
T ss_dssp             CCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-----------SCCTT
T ss_pred             CccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhc-----------ccccc
Confidence            8999999999866554    334445577888888    4556777788888899999998775           34445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGS  253 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp  253 (296)
                      ..+|+.||++.+.+++.++.|   +||++++|.||.|..|
T Consensus       148 ~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~  187 (254)
T d1hdca_         148 TSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTP  187 (254)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred             hhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCc
Confidence            789999999999999999988   7899999999999765

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=5.1e-30  Score=218.39  Aligned_cols=168  Identities=13%  Similarity=0.075  Sum_probs=137.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+++||||++|||+++|+.|+++|++|++++|+....+++.+++      +.+..++.+|++|.+++++++++     +
T Consensus         4 gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (243)
T d1q7ba_           4 GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL------GANGKGLMLNVTDPASIESVLEKIRAEFG   77 (243)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH------GGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh------CCCCcEEEEEecCHHHhhhhhhhhhcccC
Confidence            499999999999999999999999999999998654443333332      24678899999999999888876     7


Q ss_pred             CCcEEEEcccccCcCCC----CcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGES----TLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~----~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||.....+.    .+++.+.+++|+.+    ++.+++.|++++.++||++||.+.+           .+.+.
T Consensus        78 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~-----------~~~~~  146 (243)
T d1q7ba_          78 EVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGT-----------MGNGG  146 (243)
T ss_dssp             SCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH-----------HCCTT
T ss_pred             CcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhc-----------CCCCC
Confidence            89999999998765543    34445567788888    5557788888888899999998765           23445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      .++|+.||++.+.+++.++.|   +||++++|.||.|-.+.
T Consensus       147 ~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~  187 (243)
T d1q7ba_         147 QANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDM  187 (243)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechh
Confidence            789999999999999999988   79999999999997653

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.96  E-value=1.7e-29  Score=217.21  Aligned_cols=172  Identities=12%  Similarity=0.056  Sum_probs=140.3

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|++|||||++|||+++|+.|+++|++|++++|+..+.++..++++.   .+.++.++.+|++|.+++++++++     
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~---~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRS---KGFKVEASVCDLSSRSERQELMNTVANHF   83 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH---TTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh---cCCCceEEEeeCCCHHHHHHHHHHHHHHh
Confidence            349999999999999999999999999999999876555555555443   356788999999999999887754     


Q ss_pred             C-CCcEEEEcccccCcCC----CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          144 N-AFDAVMHFAAVAYVGE----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       144 ~-~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                      + ++|++|||||.....+    ..++++..+++|+.+    ++.+++.|++++.++||++||....           .+.
T Consensus        84 ~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~-----------~~~  152 (259)
T d2ae2a_          84 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGA-----------LAV  152 (259)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGT-----------SCC
T ss_pred             CCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccc-----------ccc
Confidence            3 6999999999865544    334455678899888    4556777788888899999997765           344


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +....|+.||++.+.+++.++.|   +||++++|.||.|..|.
T Consensus       153 ~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~  195 (259)
T d2ae2a_         153 PYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSL  195 (259)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHH
T ss_pred             ccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHH
Confidence            45789999999999999999988   68999999999997753

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=1.6e-29  Score=222.81  Aligned_cols=164  Identities=18%  Similarity=0.224  Sum_probs=140.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+||||||||+||++|+++|+++|+.|+++++..                       .+|++|.+.+.++++..++|.++
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~d~v~   59 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-----------------------ELNLLDSRAVHDFFASERIDQVY   59 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-----------------------TCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch-----------------------hccccCHHHHHHHHhhcCCCEEE
Confidence            7899999999999999999999999998765311                       26899999999998877899999


Q ss_pred             EcccccCc-CCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCC-----CCCChHHHHH
Q 022471          151 HFAAVAYV-GESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ-----APINPYGKAK  224 (296)
Q Consensus       151 ~~Ag~~~~-~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~-----~~~~~Y~~sK  224 (296)
                      |+|+.... ......+.+.+++|+.+|.++++++.+.+++++||+||.++||.....+++|+.+.     ++.++|+.||
T Consensus        60 ~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK  139 (315)
T d1e6ua_          60 LAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAK  139 (315)
T ss_dssp             ECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHH
T ss_pred             EcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHH
Confidence            99976432 22345666788999999999999999999999999999999998777777776433     2346799999


Q ss_pred             HHHHHHHHHhhhcCCCcEEEEecCeeecCCCCC
Q 022471          225 KMAEDIILDFSKNSDMAVMILRYFNVIGSDPEG  257 (296)
Q Consensus       225 ~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~  257 (296)
                      .++|.+++.+.+++|++++++||++||||++..
T Consensus       140 ~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~  172 (315)
T d1e6ua_         140 IAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNF  172 (315)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEECEEESTTCCC
T ss_pred             HHHHHHHHHHHHHhCCCEEEEeeccEECCCCCC
Confidence            999999999999899999999999999998653

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.96  E-value=2e-29  Score=213.91  Aligned_cols=161  Identities=17%  Similarity=0.149  Sum_probs=131.7

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|+||||||++|||+++|++|+++|++|++++|+....              .++..+++|++|.+++++++++     
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~--------------~~~~~~~~Dv~~~~~v~~~~~~~~~~~   71 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP--------------KGLFGVEVDVTDSDAVDRAFTAVEEHQ   71 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC--------------TTSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh--------------cCceEEEEecCCHHHHHHHHHHHHHhc
Confidence            349999999999999999999999999999999865432              3567889999999999988876     


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +++|+||||||.....+    ..+++++.+++|+.+    ++.+++.|++++.++||++||.+.+           .+.+
T Consensus        72 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~-----------~~~~  140 (237)
T d1uzma1          72 GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGL-----------WGIG  140 (237)
T ss_dssp             SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------------
T ss_pred             CCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhc-----------cCCc
Confidence            78999999999865544    334455678899988    4557788888888899999997765           2344


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...+|+.||++.+.+++.++.|   +||++++|.||.|..+.
T Consensus       141 ~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~  182 (237)
T d1uzma1         141 NQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDM  182 (237)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChh
Confidence            5779999999999999999988   79999999999998764

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.96  E-value=1.5e-29  Score=215.02  Aligned_cols=171  Identities=15%  Similarity=0.117  Sum_probs=140.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCe-------EEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYR-------VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE  143 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~-------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~  143 (296)
                      ++||||||++|||+++|++|+++|++       |++++|+....++..+++++   .+.++.++.+|++|.+++++++++
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~---~g~~~~~~~~Dvt~~~~v~~~~~~   78 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRA---EGALTDTITADISDMADVRRLTTH   78 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHT---TTCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHh---cCCcEEEEEecCCCHHHHHHHHHH
Confidence            56899999999999999999999997       88888765554444444443   356788999999999999988866


Q ss_pred             -----CCCcEEEEcccccCcCC----CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCC
Q 022471          144 -----NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (296)
Q Consensus       144 -----~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e  210 (296)
                           +++|+||||||.....+    ..++++..+++|+.+    ++.+++.|++++.++||++||.+.+          
T Consensus        79 ~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~----------  148 (240)
T d2bd0a1          79 IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAAT----------  148 (240)
T ss_dssp             HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT----------
T ss_pred             HHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhc----------
Confidence                 78999999999876554    334455678899998    5557888888888899999998775          


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       211 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                       .+.+...+|++||++.+.|++.++.|   +||++++|.||.|..|.-
T Consensus       149 -~~~~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~  195 (240)
T d2bd0a1         149 -KAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMW  195 (240)
T ss_dssp             -SCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTT
T ss_pred             -CCCCCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchh
Confidence             34455789999999999999999988   799999999999988753

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.96  E-value=2.4e-29  Score=216.23  Aligned_cols=173  Identities=11%  Similarity=0.028  Sum_probs=130.8

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|++|||||++|||+++|+.|+++|++|++++|+..+.++..+.++..   +.++.++.+|++|.+++++++++     
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK---GFQVTGSVCDASLRPEREKLMQTVSSMF   83 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCceEEEeccCCCHHHHHHHHHHHHHHh
Confidence            3499999999999999999999999999999998765555555554433   46789999999999999887754     


Q ss_pred             -CCCcEEEEcccccCcCC----CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          144 -NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       144 -~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                       +++|++|||||.....+    ..+++++.+++|+.+    ++.+++.|++++.++||++||...+           .+.
T Consensus        84 ~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~-----------~~~  152 (259)
T d1xq1a_          84 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGV-----------VSA  152 (259)
T ss_dssp             TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-------------------
T ss_pred             CCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccc-----------ccc
Confidence             46999999999866544    334455677889988    5556777888888899999997764           334


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      +....|+.||.+.+.+++.++.|   +||++++|.||.|..|..
T Consensus       153 ~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~  196 (259)
T d1xq1a_         153 SVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLA  196 (259)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----
T ss_pred             cccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHh
Confidence            45789999999999999999988   799999999999987753

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.2e-29  Score=215.92  Aligned_cols=202  Identities=13%  Similarity=0.056  Sum_probs=153.5

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|+|+||||++|||+++|++|+++|++|++++|+..+.++..++++..   +.++.++.||++|.+++++++++     
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~---~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL---GAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            4499999999999999999999999999999998776666666666543   46899999999999999988865     


Q ss_pred             CCCcEEEEcccccCcCCCCcC----hHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGESTLD----PLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~~~~~----~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +++|++|||||........+.    .++.+++|+.+    ++.+++.|++++.++||++||.+.+           .+.+
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~-----------~~~~  151 (244)
T d1yb1a_          83 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGH-----------VSVP  151 (244)
T ss_dssp             CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-C-----------CCHH
T ss_pred             CCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhc-----------CCCC
Confidence            789999999998766554333    34567889888    5557788888888899999997765           3334


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc------CCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN------SDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~------~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      ...+|+.||++.+.+++.++.|      .||++++|.||+|-.+.-.....  +....-.+-.+...+++.+..++.
T Consensus       152 ~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~~--~~~~~~~pe~va~~i~~~~~~~~~  226 (244)
T d1yb1a_         152 FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPST--SLGPTLEPEEVVNRLMHGILTEQK  226 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTHH--HHCCCCCHHHHHHHHHHHHHTTCS
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcCc--cccCCCCHHHHHHHHHHHHhcCCc
Confidence            4678999999999999999976      48999999999998764221100  000000111456667777766554

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.96  E-value=1.2e-28  Score=223.87  Aligned_cols=218  Identities=25%  Similarity=0.219  Sum_probs=159.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-------------cchhh---hhhhhhCCCCCceEEEEccCCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG-------------NIGAV---KVLQELFPEPGRLQFIYADLGD  133 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~-------------~~~~~---~~~~~~~~~~~~~~~~~~Dl~d  133 (296)
                      +|+||||||||+||++++++|+++||+|+++|...+.             .....   .......  +.+++++.+|++|
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~Dl~d   78 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT--GKSIELYVGDICD   78 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH--CCCCEEEESCTTS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhc--CCCcEEEEccCCC
Confidence            3899999999999999999999999999999732111             11111   1111111  2578999999999


Q ss_pred             HHHHHHHhhcCCCcEEEEcccccCcCCCCcC---hHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcccccccCCCCCC--
Q 022471          134 AKAVNKFFSENAFDAVMHFAAVAYVGESTLD---PLKYYHNITSNTLVVLESMARHGVD-TLIYSSTCATYGEPEKMP--  207 (296)
Q Consensus       134 ~~~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~---~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS~~~~g~~~~~~--  207 (296)
                      .+.++++++..++|+|||+|+......+..+   +...+++|+.||.++++++++.+.+ +++++||..+|+......  
T Consensus        79 ~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~  158 (393)
T d1i24a_          79 FEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEE  158 (393)
T ss_dssp             HHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCS
T ss_pred             HHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccccccc
Confidence            9999999987789999999997655443333   4567899999999999999998765 677888888886543210  


Q ss_pred             ----C-------CCCCCCCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCC-C---CCcccccccc
Q 022471          208 ----I-------TEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGE-A---PRPELREHGR  272 (296)
Q Consensus       208 ----~-------~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~-~---~~~~~~~~~~  272 (296)
                          .       ++..+..|.++|+.||.++|.+++.++++++++++++||++||||++...... .   ........+.
T Consensus       159 ~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  238 (393)
T d1i24a_         159 GYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGT  238 (393)
T ss_dssp             SEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCC
T ss_pred             ccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCcccccccccccccccccccccc
Confidence                1       11235677889999999999999999998999999999999999986432100 0   0001111236


Q ss_pred             cHHHHHHHHhCCCCcceE
Q 022471          273 ISGACFDAARGIIAGLKV  290 (296)
Q Consensus       273 ~i~~~~~~~~~~~~~~~~  290 (296)
                      +++.++.++..++| +++
T Consensus       239 ~i~~~~~~~~~~~~-~~i  255 (393)
T d1i24a_         239 ALNRFCVQAAVGHP-LTV  255 (393)
T ss_dssp             HHHHHHHHHHHTCC-EEE
T ss_pred             chhhhhHHhhcCCe-eEE
Confidence            78888888888877 544

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.96  E-value=2.3e-29  Score=214.87  Aligned_cols=164  Identities=18%  Similarity=0.206  Sum_probs=134.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||++|||+++|+.|+++|++|++++|++..    .+..++.     +..++++|++|.+++++++++     +
T Consensus         5 GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~----~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~G   75 (248)
T d2d1ya1           5 GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG----KEVAEAI-----GGAFFQVDLEDERERVRFVEEAAYALG   75 (248)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH----HHHHHHH-----TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH----HHHHHHc-----CCeEEEEeCCCHHHHHHHHHHHHHhcC
Confidence            3999999999999999999999999999999986532    2222222     346789999999999988876     7


Q ss_pred             CCcEEEEcccccCcCCCC----cChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~~----~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||.....+.+    +++++.+++|+.+    ++.+++.|++++.++||++||.+.+           .+.+.
T Consensus        76 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~-----------~~~~~  144 (248)
T d2d1ya1          76 RVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGL-----------FAEQE  144 (248)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGT-----------SBCTT
T ss_pred             CCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccccc-----------ccccc
Confidence            899999999986655433    3445577889888    5557777888887899999998775           33445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGS  253 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp  253 (296)
                      ..+|+.||++.+.+++.++.|   +||++++|.||.|-.|
T Consensus       145 ~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~  184 (248)
T d2d1ya1         145 NAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATE  184 (248)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCc
Confidence            789999999999999999988   7999999999999765

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.96  E-value=5.8e-29  Score=211.70  Aligned_cols=165  Identities=16%  Similarity=0.096  Sum_probs=132.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||++|||+++|++|+++|++|++++|+..+.++.   .++     .+..++.+|++|.+++++++++     +
T Consensus         5 gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~---~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   76 (242)
T d1ulsa_           5 DKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREA---AEA-----VGAHPVVMDVADPASVERGFAEALAHLG   76 (242)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHT-----TTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---HHH-----cCCeEEEEecCCHHHHHHHHHHHHHhcC
Confidence            39999999999999999999999999999999764333222   222     3567899999999999988866     7


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHH----HHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t----~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|+||||||+....+    ..+++++.+++|+.++    +.+++.|++.+.++++++||....            +.++
T Consensus        77 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~------------~~~~  144 (242)
T d1ulsa_          77 RLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYL------------GNLG  144 (242)
T ss_dssp             SCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGG------------CCTT
T ss_pred             CceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecccccc------------CCCC
Confidence            8999999999866544    3344556788999984    446666777777778888886543            2344


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ..+|+.||++.+.+++.++.|   +||++++|.||.|..+.
T Consensus       145 ~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~  185 (242)
T d1ulsa_         145 QANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRM  185 (242)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChh
Confidence            678999999999999999988   78999999999998875

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.96  E-value=1.5e-29  Score=217.31  Aligned_cols=170  Identities=16%  Similarity=0.118  Sum_probs=140.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||++|||+++|++|+++|++|++++|+....++..+++++.   +.++.++++|++|.+++++++++     +
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~---g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA---GVEADGRTCDVRSVPEIEALVAAVVERYG   78 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            389999999999999999999999999999998765555555555543   46789999999999999988876     7


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHH------HHcCCCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESM------ARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~------~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                      ++|+||||||.....+    ..+++++.+++|+.++..+.+++      ++.+.++||++||...+           .+.
T Consensus        79 ~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~-----------~~~  147 (257)
T d2rhca1          79 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGK-----------QGV  147 (257)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGT-----------SCC
T ss_pred             CCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccc-----------ccc
Confidence            8999999999866544    34445567889999977766654      34556799999998765           344


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGS  253 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp  253 (296)
                      +...+|++||++.+.+++.++.|   +||++++|.||.|-.|
T Consensus       148 ~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~  189 (257)
T d2rhca1         148 VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP  189 (257)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSH
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCH
Confidence            55789999999999999999988   6899999999999765

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.96  E-value=7.3e-29  Score=214.35  Aligned_cols=176  Identities=14%  Similarity=0.179  Sum_probs=138.7

Q ss_pred             CCCCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc--
Q 022471           66 HEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--  143 (296)
Q Consensus        66 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~--  143 (296)
                      ++.+ |++|||||++|||+++|++|+++|++|++++|+..+.+++.+   ++.. ...+.++.+|++|.+++++++++  
T Consensus         3 rL~g-KvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~---~l~~-~~~~~~~~~Dv~~~~~v~~~~~~~~   77 (268)
T d2bgka1           3 RLQD-KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCN---NIGS-PDVISFVHCDVTKDEDVRNLVDTTI   77 (268)
T ss_dssp             TTTT-CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HHCC-TTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCC-CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---HhcC-CCceEEEEccCCCHHHHHHHHHHHH
Confidence            3445 999999999999999999999999999999986544443333   3322 35688899999999999998865  


Q ss_pred             ---CCCcEEEEcccccCcCC------CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCC
Q 022471          144 ---NAFDAVMHFAAVAYVGE------STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (296)
Q Consensus       144 ---~~~D~vi~~Ag~~~~~~------~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e  210 (296)
                         +++|++|||||.....+      ..++++..+++|+.+    ++.+++.|++++.+++|++||...+          
T Consensus        78 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~----------  147 (268)
T d2bgka1          78 AKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSF----------  147 (268)
T ss_dssp             HHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGT----------
T ss_pred             HHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccc----------
Confidence               78999999999754321      223455678889888    5557777777787899999997765          


Q ss_pred             CCCCCC-CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCCCC
Q 022471          211 ETPQAP-INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDPEG  257 (296)
Q Consensus       211 ~~~~~~-~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~~~  257 (296)
                       .+..+ ...|++||++.+.+++.++.|   +||+|++|.||.|.+|....
T Consensus       148 -~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~  197 (268)
T d2bgka1         148 -TAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTD  197 (268)
T ss_dssp             -CCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTT
T ss_pred             -ccccccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhh
Confidence             22222 347999999999999999988   79999999999999886443

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.96  E-value=2.9e-29  Score=214.72  Aligned_cols=172  Identities=17%  Similarity=0.214  Sum_probs=136.4

Q ss_pred             CCCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc---
Q 022471           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (296)
Q Consensus        67 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (296)
                      +.+ |++|||||++|||+++|+.|+++|++|++++|+....+++.+   ++ ..+.++.++++|++|.+++++++++   
T Consensus         4 L~g-K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~---~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (251)
T d1zk4a1           4 LDG-KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAK---SV-GTPDQIQFFQHDSSDEDGWTKLFDATEK   78 (251)
T ss_dssp             TTT-CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HH-CCTTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---Hh-CCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            444 999999999999999999999999999999986543333333   33 2346889999999999999988876   


Q ss_pred             --CCCcEEEEcccccCcCCCC----cChHHHHHHHHHHH----HHHHHHHHHcCCC-EEEEEcccccccCCCCCCCCCCC
Q 022471          144 --NAFDAVMHFAAVAYVGEST----LDPLKYYHNITSNT----LVVLESMARHGVD-TLIYSSTCATYGEPEKMPITEET  212 (296)
Q Consensus       144 --~~~D~vi~~Ag~~~~~~~~----~~~~~~~~~n~~~t----~~ll~~~~~~~~~-riV~~SS~~~~g~~~~~~~~e~~  212 (296)
                        +++|+||||||.....+..    +++.+.+++|+.++    +.+++.|++++.+ +||++||.+.+           .
T Consensus        79 ~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~-----------~  147 (251)
T d1zk4a1          79 AFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGF-----------V  147 (251)
T ss_dssp             HHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGT-----------S
T ss_pred             HhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeecccee-----------c
Confidence              8899999999987655433    34445778898884    4466667776654 89999998765           2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc-----CCCcEEEEecCeeecCC
Q 022471          213 PQAPINPYGKAKKMAEDIILDFSKN-----SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       213 ~~~~~~~Y~~sK~~~e~~~~~~~~~-----~gi~~~~lrpg~v~Gp~  254 (296)
                      +.+....|+.||.+.+.+++.++.|     +||++++|.||.|..|.
T Consensus       148 ~~~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~  194 (251)
T d1zk4a1         148 GDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPL  194 (251)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHH
T ss_pred             cCCCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChh
Confidence            3445779999999999999998865     68999999999997754

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.96  E-value=4.6e-29  Score=214.59  Aligned_cols=172  Identities=13%  Similarity=0.106  Sum_probs=138.4

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC-CcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR-GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (296)
                      .+|++|||||++|||+++|++|+++|++|++++|+.. ..++..+.+++.   +.++.++++|++|.+++++++++    
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~---g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV---GGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhc---CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3499999999999999999999999999999998643 233334444433   46788999999999999988876    


Q ss_pred             -CCCcEEEEcccccCcCC----CCcChHHHHHHHHHH----HHHHHHHHHHcCCC-EEEEEcccccccCCCCCCCCCCCC
Q 022471          144 -NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSN----TLVVLESMARHGVD-TLIYSSTCATYGEPEKMPITEETP  213 (296)
Q Consensus       144 -~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~-riV~~SS~~~~g~~~~~~~~e~~~  213 (296)
                       +++|++|||||+....+    ..+++.+.+++|+.+    ++.+++.|++++.+ +||++||.+.+           .+
T Consensus        83 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~-----------~~  151 (261)
T d1geea_          83 FGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEK-----------IP  151 (261)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGT-----------SC
T ss_pred             hCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhc-----------cc
Confidence             78999999999866544    334455577889888    55567778777644 68999997765           34


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       214 ~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      .+....|+.||++.+.+++.++.|   +||++++|.||.|..|.
T Consensus       152 ~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~  195 (261)
T d1geea_         152 WPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPI  195 (261)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGG
T ss_pred             CccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHh
Confidence            445788999999999999999988   79999999999998764

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.96  E-value=4.4e-29  Score=214.24  Aligned_cols=168  Identities=20%  Similarity=0.160  Sum_probs=135.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||++|||+++|+.|+++|++|++++|+...   +.+..+++   +.++.++++|++|.+++++++++     +
T Consensus         5 gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~---l~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g   78 (256)
T d1k2wa_           5 GKTALITGSARGIGRAFAEAYVREGARVAIADINLEA---ARATAAEI---GPAACAIALDVTDQASIDRCVAELLDRWG   78 (256)
T ss_dssp             TEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHH---HHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHh---CCceEEEEeeCCCHHHHHHHHHHHHHHhC
Confidence            4999999999999999999999999999999976433   33333444   35788999999999999988876     7


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHH----HHHHHHHc-CCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLV----VLESMARH-GVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~-~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|+||||||.....+    ..+++++.+++|+.++..    +++.+.+. ..++||++||.+.+           .+.+
T Consensus        79 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~-----------~~~~  147 (256)
T d1k2wa_          79 SIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGR-----------RGEA  147 (256)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT-----------SCCT
T ss_pred             CccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhc-----------cccc
Confidence            9999999999866544    334455678899988554    45544444 45799999998765           3445


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...+|+.||++.+.+++.++.|   +||++++|.||.|-.|.
T Consensus       148 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~  189 (256)
T d1k2wa_         148 LVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEH  189 (256)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTT
T ss_pred             cccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchh
Confidence            5789999999999999999988   79999999999998874

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.96  E-value=5.7e-28  Score=217.01  Aligned_cols=180  Identities=22%  Similarity=0.248  Sum_probs=149.1

Q ss_pred             CCCCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCC
Q 022471           66 HEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENA  145 (296)
Q Consensus        66 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~  145 (296)
                      +... |+|||||||||||++|+++|+++|++|+++++.......  ..       .....+..+|+.+.+.+.+++  .+
T Consensus        12 ~~~n-MKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~--~~-------~~~~~~~~~D~~~~~~~~~~~--~~   79 (363)
T d2c5aa1          12 PSEN-LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT--ED-------MFCDEFHLVDLRVMENCLKVT--EG   79 (363)
T ss_dssp             TTSC-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC--GG-------GTCSEEEECCTTSHHHHHHHH--TT
T ss_pred             CCCC-CEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh--hh-------cccCcEEEeechhHHHHHHHh--hc
Confidence            3344 789999999999999999999999999999875433211  11       134578889999999999988  57


Q ss_pred             CcEEEEcccccCcC-CCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCC-------CCCCCCCC
Q 022471          146 FDAVMHFAAVAYVG-ESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPIT-------EETPQAPI  217 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~-~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~-------e~~~~~~~  217 (296)
                      +|+|||+|+..... .....+...+..|+.++.++++++++.+++++|++||..+|+.....+.+       |..+..|.
T Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~  159 (363)
T d2c5aa1          80 VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQ  159 (363)
T ss_dssp             CSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCS
T ss_pred             CCeEeecccccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCC
Confidence            99999999875443 23567778899999999999999999999999999999999866544433       34466789


Q ss_pred             ChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCC
Q 022471          218 NPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEG  257 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~  257 (296)
                      ++|+.||.++|.+++.+.+++|++++++||++||||++..
T Consensus       160 ~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~  199 (363)
T d2c5aa1         160 DAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTW  199 (363)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCC
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcc
Confidence            9999999999999999998899999999999999998643

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.7e-29  Score=213.76  Aligned_cols=167  Identities=21%  Similarity=0.190  Sum_probs=133.9

Q ss_pred             CCCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc---
Q 022471           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (296)
Q Consensus        67 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (296)
                      ..+ |++|||||++|||+++|+.|+++|++|++++|+....+    .+.+.   ..++.++.+|++|.+++++++++   
T Consensus         4 l~G-K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~----~~~~~---~~~~~~~~~Dvs~~~~v~~~~~~~~~   75 (250)
T d1ydea1           4 YAG-KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGR----ALEQE---LPGAVFILCDVTQEDDVKTLVSETIR   75 (250)
T ss_dssp             TTT-CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HHHHH---CTTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH----HHHHh---cCCCeEEEccCCCHHHHHHHHHHHHH
Confidence            345 99999999999999999999999999999997643322    22222   24678999999999999998876   


Q ss_pred             --CCCcEEEEcccccCc-CC----CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCC
Q 022471          144 --NAFDAVMHFAAVAYV-GE----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET  212 (296)
Q Consensus       144 --~~~D~vi~~Ag~~~~-~~----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~  212 (296)
                        +++|+||||||.... ..    ..+++++.+++|+.+    ++.+++.|++.+ ++||++||.+.+           .
T Consensus        76 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~-----------~  143 (250)
T d1ydea1          76 RFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGA-----------I  143 (250)
T ss_dssp             HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHH-----------H
T ss_pred             hcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-CCCccccccccc-----------c
Confidence              789999999997533 22    334455678899998    455677777665 799999998765           2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecC
Q 022471          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGS  253 (296)
Q Consensus       213 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp  253 (296)
                      +.+...+|+.||++.+.+++.++.|   +||++++|.||.|..|
T Consensus       144 ~~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~  187 (250)
T d1ydea1         144 GQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTP  187 (250)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCH
T ss_pred             cccCcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCh
Confidence            3445789999999999999999988   7999999999999765

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.96  E-value=2.7e-29  Score=213.99  Aligned_cols=170  Identities=15%  Similarity=0.095  Sum_probs=138.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC-CCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      ++||||||++|||+++|++|+++|++|++.+++. ...++..+.+++.   +.++.++++|++|.+++++++++     +
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY---GGQAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH---TCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc---CCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999999999876533 3344444444443   46788999999999999988865     7


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      ++|++|||||.....+    ..+++++.+++|+.+    ++.+++.|++++.++||++||.+.+           .+.+.
T Consensus        79 ~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~-----------~~~~~  147 (244)
T d1edoa_          79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGL-----------IGNIG  147 (244)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHH-----------HCCTT
T ss_pred             CCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhc-----------CCCCC
Confidence            8999999999866544    344455677889888    5557888888888899999998765           23445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ...|+.||.+.+.|++.++.|   +||++++|.||.|..|.
T Consensus       148 ~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~  188 (244)
T d1edoa_         148 QANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDM  188 (244)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHH
T ss_pred             CHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHH
Confidence            789999999999999999998   79999999999997653

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.96  E-value=8.5e-29  Score=214.32  Aligned_cols=174  Identities=16%  Similarity=0.059  Sum_probs=136.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||++|||+++|+.|+++|++|++++|+..+.+++.+++++......++.++++|++|.+++++++++     +
T Consensus         5 gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g   84 (272)
T d1xkqa_           5 NKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFG   84 (272)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            49999999999999999999999999999999877666666666665533345789999999999999988876     7


Q ss_pred             CCcEEEEcccccCcCCC----Cc----ChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGES----TL----DPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET  212 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~----~~----~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~  212 (296)
                      ++|++|||||.......    .+    .+.+.+++|+.+    ++.+++.|++.+.+.|+++||.+..           .
T Consensus        85 ~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~-----------~  153 (272)
T d1xkqa_          85 KIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGP-----------Q  153 (272)
T ss_dssp             CCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSS-----------S
T ss_pred             CceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccc-----------c
Confidence            89999999998654322    22    245567889888    4556677776654444444444443           2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       213 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +.+....|+.||++.+.+++.++.|   +||+|++|.||.|-.+.
T Consensus       154 ~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~  198 (272)
T d1xkqa_         154 AQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGF  198 (272)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSH
T ss_pred             CCCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchh
Confidence            3445778999999999999999988   89999999999997653

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.96  E-value=4.5e-29  Score=214.08  Aligned_cols=169  Identities=20%  Similarity=0.201  Sum_probs=137.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (296)
                      |++|||||++|||+++|++|+++|++|++++|++.+.+++.+++++.   +.++.++++|++|.+++++++++     ++
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   78 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA---GGHAVAVKVDVSDRDQVFAAVEQARKTLGG   78 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            67899999999999999999999999999998766655555555543   46789999999999999988876     78


Q ss_pred             CcEEEEcccccCcCC----CCcChHHHHHHHHHHHHH----HHHHHHHcC-CCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          146 FDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLV----VLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~-~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      +|+||||||+....+    ..+++++.+++|+.++..    +++.|++.+ .++||++||.+.+           .+.+.
T Consensus        79 iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~-----------~~~~~  147 (255)
T d1gega_          79 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGH-----------VGNPE  147 (255)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT-----------SCCTT
T ss_pred             ccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhc-----------ccCcc
Confidence            999999999866544    334455677899998554    556555554 4679999997765           34455


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGS  253 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp  253 (296)
                      ...|+.||++.+.+++.++.|   +||++++|.||.|-.|
T Consensus       148 ~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~  187 (255)
T d1gega_         148 LAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTP  187 (255)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSH
T ss_pred             cccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccCh
Confidence            788999999999999999988   7999999999999764

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.96  E-value=7.8e-29  Score=220.25  Aligned_cols=185  Identities=22%  Similarity=0.208  Sum_probs=149.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc-chhhhhhhhh--CCCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN-IGAVKVLQEL--FPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      |+||||||||+||++|+++|+++||+|++++|..... ....+.+...  ......+.++.+|+++.+.+.+.++..++|
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D   81 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD   81 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccc
Confidence            8999999999999999999999999999999854321 1111111110  011256889999999999999998877899


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHH
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-----GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGK  222 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-----~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~  222 (296)
                      +|||+|+........+++...++.|+.++.++++++++.     ...++++.||+.+|+.. ..+++|+.+..|.+.|+.
T Consensus        82 ~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~-~~~~~E~~~~~p~~~Y~~  160 (339)
T d1n7ha_          82 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGST-PPPQSETTPFHPRSPYAA  160 (339)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTS-CSSBCTTSCCCCCSHHHH
T ss_pred             hhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccC-CCCCCCCCCCCCcchhhH
Confidence            999999987666666788899999999999999988754     23467888887777554 356889999999999999


Q ss_pred             HHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          223 AKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       223 sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                      ||.++|.++..+.++++++++++||++||||+..
T Consensus       161 sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~  194 (339)
T d1n7ha_         161 SKCAAHWYTVNYREAYGLFACNGILFNHESPRRG  194 (339)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSC
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCC
Confidence            9999999999999989999999999999999743

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.96  E-value=5.7e-29  Score=215.65  Aligned_cols=174  Identities=16%  Similarity=0.078  Sum_probs=140.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||++|||+++|++|+++|++|++++|+..+.+++.+++.+......++.++.+|++|.+++++++++     +
T Consensus         4 gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   83 (274)
T d1xhla_           4 GKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFG   83 (274)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            39999999999999999999999999999999877666666666665543335789999999999999888866     7


Q ss_pred             CCcEEEEcccccCcCC------CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE------STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~------~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                      ++|++|||||......      ..+.++..+++|+.+    ++.+++.|++++.++|+++||.+.+           .+.
T Consensus        84 ~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~-----------~~~  152 (274)
T d1xhla_          84 KIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGP-----------QAH  152 (274)
T ss_dssp             CCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSS-----------SCC
T ss_pred             CceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhcc-----------ccC
Confidence            8999999999754322      223455678889988    4557777777777788888886654           234


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +....|+.||.+.+.+++.++.|   +||++++|.||.|..|.
T Consensus       153 ~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~  195 (274)
T d1xhla_         153 SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGF  195 (274)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSH
T ss_pred             CCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCch
Confidence            45678999999999999999988   79999999999998763

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.96  E-value=4.2e-29  Score=215.37  Aligned_cols=173  Identities=13%  Similarity=0.076  Sum_probs=135.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||++|||+++|++|+++|++|++++|+....+++.+++........++.++++|++|.+++++++++     +
T Consensus         5 gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g   84 (264)
T d1spxa_           5 EKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFG   84 (264)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            39999999999999999999999999999999887666666666665543345789999999999999988876     7


Q ss_pred             CCcEEEEcccccCcCC--------CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEccc-ccccCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE--------STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTC-ATYGEPEKMPITEE  211 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~--------~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~-~~~g~~~~~~~~e~  211 (296)
                      ++|++|||||......        ..++++..+++|+.+    ++.+++.|++.+ +++|+++|. +.+           
T Consensus        85 ~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~-----------  152 (264)
T d1spxa_          85 KLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGL-----------  152 (264)
T ss_dssp             CCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSS-----------
T ss_pred             CCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-Ccceeeeeecccc-----------
Confidence            8999999999753221        233456678889998    455777777765 456665554 333           


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       212 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      .+.+....|+.||.+.+.+++.++.|   +||++++|.||.|-.+.
T Consensus       153 ~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~  198 (264)
T d1spxa_         153 HATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGF  198 (264)
T ss_dssp             SCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC
T ss_pred             ccCCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcc
Confidence            23444678999999999999999988   79999999999998765

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=1.8e-28  Score=218.55  Aligned_cols=201  Identities=19%  Similarity=0.256  Sum_probs=161.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      ||||||||||+||++++++|+++|+ +|+++++.........        ...+++++.+|+++.+++.+.+.+ ++|+|
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~--------~~~~~~~i~~Di~~~~~~~~~~~~-~~d~V   71 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDISIHSEWIEYHVK-KCDVV   71 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT--------TCTTEEEEECCTTTCSHHHHHHHH-HCSEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc--------cCCCeEEEECccCChHHHHHHHHh-CCCcc
Confidence            5799999999999999999999995 8999987543322221        136899999999998777664433 69999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCC-------CCCCCCChHHH
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE-------TPQAPINPYGK  222 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~-------~~~~~~~~Y~~  222 (296)
                      ||+|+........+++...++.|+.|+.++++++.+.+. +++++||+.+|+........|.       ....|...|+.
T Consensus        72 ih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~  150 (342)
T d2blla1          72 LPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSV  150 (342)
T ss_dssp             EECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-EEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHH
T ss_pred             ccccccccccccccCCccccccccccccccccccccccc-cccccccccccccccccccccccccccccccCCCcchhhh
Confidence            999998776666777888999999999999999999875 7788999999987655444432       23345678999


Q ss_pred             HHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          223 AKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       223 sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      ||.++|.+++.+++++|++++++||+.+|||......+.....     ..+++.++..++.|++
T Consensus       151 sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~  209 (342)
T d2blla1         151 SKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGS-----SRAITQLILNLVEGSP  209 (342)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCB-----CHHHHHHHHHHHHTCC
T ss_pred             cccchhhhhhhhhcccCceeEEeeccccccccccccccccccc-----cccchHHHHHHHhCCC
Confidence            9999999999999989999999999999999876554433321     3678888888888877

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1e-28  Score=210.50  Aligned_cols=167  Identities=18%  Similarity=0.150  Sum_probs=134.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-CCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~  148 (296)
                      +|++|||||++|||+++|+.|+++|++|++++|+..+.+   +..++.    .++..+.+|++|.+++++++++ +++|+
T Consensus         7 GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~---~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~g~iDi   79 (244)
T d1pr9a_           7 GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLD---SLVREC----PGIEPVCVDLGDWEATERALGSVGPVDL   79 (244)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---HHHHHS----TTCEEEECCTTCHHHHHHHHTTCCCCCE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHH---HHHHhc----CCCeEEEEeCCCHHHHHHHHHHhCCceE
Confidence            499999999999999999999999999999997643332   222222    4578899999999999999987 78999


Q ss_pred             EEEcccccCcCC----CCcChHHHHHHHHHHH----HHHHHHHH-HcCCCEEEEEcccccccCCCCCCCCCCCCCCCCCh
Q 022471          149 VMHFAAVAYVGE----STLDPLKYYHNITSNT----LVVLESMA-RHGVDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (296)
Q Consensus       149 vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t----~~ll~~~~-~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~  219 (296)
                      ||||||.....+    ..++++..+++|+.++    +.+++.+. +.+.++||++||.+.+           .+.+....
T Consensus        80 lVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~-----------~~~~~~~~  148 (244)
T d1pr9a_          80 LVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQ-----------RAVTNHSV  148 (244)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT-----------SCCTTBHH
T ss_pred             EEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccc-----------ccccchhh
Confidence            999999866554    3344556778888884    44566544 3456799999998765           33445778


Q ss_pred             HHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          220 YGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       220 Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      |+.||.+.+.+++.++.|   +||++++|.||.|..|.
T Consensus       149 Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~  186 (244)
T d1pr9a_         149 YCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSM  186 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHH
T ss_pred             hhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChH
Confidence            999999999999999988   79999999999998764

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.96  E-value=9.8e-28  Score=217.14  Aligned_cols=208  Identities=34%  Similarity=0.529  Sum_probs=162.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHh-CCCeEEEEecCCCCc---------chhhhhhhhhC-----CCCCceEEEEccCCCHH
Q 022471           71 THVLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGN---------IGAVKVLQELF-----PEPGRLQFIYADLGDAK  135 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~-~G~~V~~~~r~~~~~---------~~~~~~~~~~~-----~~~~~~~~~~~Dl~d~~  135 (296)
                      |+||||||+||||++|+++|++ .|++|+++|+..+..         +.....++...     .....+.++.+|++|.+
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~   82 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHH
Confidence            6899999999999999999986 699999998532211         11111111110     11246788999999999


Q ss_pred             HHHHHhhc-CCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCC-------CCC
Q 022471          136 AVNKFFSE-NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPE-------KMP  207 (296)
Q Consensus       136 ~v~~~~~~-~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~-------~~~  207 (296)
                      .++++++. .++|+|||+|+........+.+...++.|+.++.++++++++.+.++++++||..+|+...       ..+
T Consensus        83 ~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~  162 (383)
T d1gy8a_          83 FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEP  162 (383)
T ss_dssp             HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCCC
T ss_pred             HhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCcccccccccccccccccccccccccc
Confidence            99999876 5689999999987766666778889999999999999999999999999999999887543       235


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHh
Q 022471          208 ITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAAR  282 (296)
Q Consensus       208 ~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  282 (296)
                      +.|+.+..|.++|+.||.++|.+++.+.+.+|++++++||++||||++.........    ....++|.++..+.
T Consensus       163 ~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~----~~~~~ip~ii~~~~  233 (383)
T d1gy8a_         163 IDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQ----GSTHLIPIILGRVM  233 (383)
T ss_dssp             BCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCST----TCCSHHHHHHHHHH
T ss_pred             cccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCcccccccccc----ccchhHHHHHHHHH
Confidence            677778889999999999999999999988999999999999999997654322211    12267777766554

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=1.4e-28  Score=209.21  Aligned_cols=167  Identities=16%  Similarity=0.143  Sum_probs=133.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-CCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~  148 (296)
                      +|++|||||++|||+++|++|+++|++|++++|+..+.   .+..++.    .++.++.+|++|.+++++++++ +++|+
T Consensus         5 GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l---~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~g~iDi   77 (242)
T d1cyda_           5 GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDL---VSLAKEC----PGIEPVCVDLGDWDATEKALGGIGPVDL   77 (242)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH---HHHHHHS----TTCEEEECCTTCHHHHHHHHTTCCCCSE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH---HHHHHhc----CCCeEEEEeCCCHHHHHHHHHHcCCCeE
Confidence            49999999999999999999999999999999764332   2222222    4678899999999999999987 78999


Q ss_pred             EEEcccccCcCC----CCcChHHHHHHHHHHHHH----HHHHHHHc-CCCEEEEEcccccccCCCCCCCCCCCCCCCCCh
Q 022471          149 VMHFAAVAYVGE----STLDPLKYYHNITSNTLV----VLESMARH-GVDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (296)
Q Consensus       149 vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~-~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~  219 (296)
                      ||||||+....+    ..++++..+++|+.++..    +++.+.+. ..++||++||...+           .+.+....
T Consensus        78 lVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~-----------~~~~~~~~  146 (242)
T d1cyda_          78 LVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAH-----------VTFPNLIT  146 (242)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT-----------SCCTTBHH
T ss_pred             EEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhcc-----------ccCCcccc
Confidence            999999866544    334445567889888555    44554443 45799999998765           33445788


Q ss_pred             HHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          220 YGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       220 Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      |+.||++.+.+++.++.|   +||++++|.||.|..|.
T Consensus       147 Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~  184 (242)
T d1cyda_         147 YSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDM  184 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHH
T ss_pred             ccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHH
Confidence            999999999999999988   78999999999998763

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.96  E-value=1.2e-28  Score=211.10  Aligned_cols=168  Identities=17%  Similarity=0.215  Sum_probs=134.2

Q ss_pred             CCCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc---
Q 022471           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (296)
Q Consensus        67 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (296)
                      +.+ |++|||||++|||+++|+.|+++|++|++++|+....+   +..+++   +.+..++++|++|.+++++++++   
T Consensus         4 L~g-K~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~---~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~   76 (253)
T d1hxha_           4 LQG-KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQ---QLAAEL---GERSMFVRHDVSSEADWTLVMAAVQR   76 (253)
T ss_dssp             TTT-CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHH---HHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH---HHHHHh---CCCeEEEEeecCCHHHHHHHHHHHHH
Confidence            344 99999999999999999999999999999997553333   333333   35678899999999999888876   


Q ss_pred             --CCCcEEEEcccccCcCC----CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCC
Q 022471          144 --NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (296)
Q Consensus       144 --~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~  213 (296)
                        +++|+||||||......    ..+++++.+++|+.+    ++.+++.|++++ ++||++||.+.+           .+
T Consensus        77 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-G~Iv~isS~~~~-----------~~  144 (253)
T d1hxha_          77 RLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSW-----------LP  144 (253)
T ss_dssp             HHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGT-----------SC
T ss_pred             HhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-Cceecccchhhh-----------cC
Confidence              78999999999865544    334455678889888    445667776554 799999998765           34


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc-----CCCcEEEEecCeeecC
Q 022471          214 QAPINPYGKAKKMAEDIILDFSKN-----SDMAVMILRYFNVIGS  253 (296)
Q Consensus       214 ~~~~~~Y~~sK~~~e~~~~~~~~~-----~gi~~~~lrpg~v~Gp  253 (296)
                      .+...+|+.||++.+.+++.++.|     ++|++++|.||.|..|
T Consensus       145 ~~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~  189 (253)
T d1hxha_         145 IEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTP  189 (253)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCH
T ss_pred             ccccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCH
Confidence            455789999999999999999876     4699999999999765

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.96  E-value=4.2e-28  Score=208.24  Aligned_cols=173  Identities=15%  Similarity=0.114  Sum_probs=138.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc------
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------  143 (296)
                      +|+||||||++|||++++++|+++|++|++++|++.+.+++.+.+.+.   +..++++.+|+++.+++++++++      
T Consensus         6 gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~---~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   82 (258)
T d1ae1a_           6 GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK---GLNVEGSVCDLLSRTERDKLMQTVAHVFD   82 (258)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCCceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            499999999999999999999999999999998766555555555443   46788999999999999887754      


Q ss_pred             CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHH----HHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~----~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      +.+|+||||||......    ..+++...+++|+.++.    .+++.|++.+.++||++||....           .+.+
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~-----------~~~~  151 (258)
T d1ae1a_          83 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGF-----------SALP  151 (258)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGT-----------SCCT
T ss_pred             CCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccc-----------cccc
Confidence            46999999999866544    33444556778888844    45667777888899999998775           3445


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~~  256 (296)
                      ....|+.+|.+.+.+++.++.|   +||++++|.||.|..|...
T Consensus       152 ~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~  195 (258)
T d1ae1a_         152 SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVE  195 (258)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-----
T ss_pred             cchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchh
Confidence            5789999999999999999988   7899999999999987643

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.3e-28  Score=209.59  Aligned_cols=169  Identities=23%  Similarity=0.198  Sum_probs=137.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||++|||+++|+.|+++|++|++++|+..+.++..+.+.+... +.++.++++|++|.+++++++++     +
T Consensus         3 GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           3 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFE-PQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSC-GGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcC-CCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            49999999999999999999999999999999876665555555444322 35788999999999999988865     7


Q ss_pred             CCcEEEEcccccCcCCCCcChHHHHHHHHHH----HHHHHHHHHHcC---CCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGESTLDPLKYYHNITSN----TLVVLESMARHG---VDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~----t~~ll~~~~~~~---~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      ++|+||||||....    +++++.+++|+.+    ++.+++.|++++   .++||++||.+.+           .+.+..
T Consensus        82 ~iDilVnnAg~~~~----~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~-----------~~~~~~  146 (254)
T d2gdza1          82 RLDILVNNAGVNNE----KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGL-----------MPVAQQ  146 (254)
T ss_dssp             CCCEEEECCCCCCS----SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT-----------SCCTTC
T ss_pred             CcCeeccccccccc----ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhc-----------cCCCCc
Confidence            89999999998643    4678888999887    555677776653   3689999998765           345557


Q ss_pred             ChHHHHHHHHHHHHHH--hhhc---CCCcEEEEecCeeecCC
Q 022471          218 NPYGKAKKMAEDIILD--FSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~--~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      .+|++||++.+.++++  ++.|   +||++++|.||.|-.|.
T Consensus       147 ~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~  188 (254)
T d2gdza1         147 PVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAI  188 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChh
Confidence            8999999999999986  5554   89999999999997653

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.1e-27  Score=208.68  Aligned_cols=174  Identities=18%  Similarity=0.137  Sum_probs=139.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEe---cCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc---C
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVD---NLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---N  144 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~---r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---~  144 (296)
                      |+||||||++|||+++|+.|+++|++|+.++   |+.+...++.+..+++...+.++.++.+|++|.+++++++++   +
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g   82 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG   82 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcccc
Confidence            7889999999999999999999999866554   333334444555555555567899999999999999998866   7


Q ss_pred             CCcEEEEcccccCcCCC----CcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGES----TLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~~----~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      .+|+||||||.......    .+.....+++|+.|    ++.+++.|++++.++||++||.+.+           .+.+.
T Consensus        83 ~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~-----------~~~~~  151 (285)
T d1jtva_          83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGL-----------MGLPF  151 (285)
T ss_dssp             CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGT-----------SCCTT
T ss_pred             chhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhc-----------CCCCC
Confidence            89999999998665543    34445567899988    5567888888888899999998775           34455


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      ..+|++||++.+.|++.++.|   +||++++|.||.|-.+.-
T Consensus       152 ~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~  193 (285)
T d1jtva_         152 NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFM  193 (285)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC---
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHH
Confidence            788999999999999999988   799999999999987653

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=8e-28  Score=210.45  Aligned_cols=176  Identities=15%  Similarity=0.129  Sum_probs=141.1

Q ss_pred             CCCCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCC--CCCceEEEEccCCCHHHHHHHhhc
Q 022471           66 HEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP--EPGRLQFIYADLGDAKAVNKFFSE  143 (296)
Q Consensus        66 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~v~~~~~~  143 (296)
                      ++.+ |++|||||++|||+++|++|+++|++|++++|+..+.++..++++....  .+.++.++.+|++|.+++++++++
T Consensus         9 ~L~g-KvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1           9 LLQG-QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTT-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            3445 9999999999999999999999999999999877666666666654432  245788999999999999988876


Q ss_pred             -----CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHH----HHHHHHHHcCCCEEEEEcccccccCCCCCCCCC
Q 022471          144 -----NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (296)
Q Consensus       144 -----~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~----~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e  210 (296)
                           +++|+||||||......    ..++++..+++|+.++.    .+++.|++.+.++||++||....          
T Consensus        88 ~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~----------  157 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKA----------  157 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTT----------
T ss_pred             HHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccc----------
Confidence                 78999999999865544    33445557788988854    46666667777789988774432          


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       211 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                        ..+....|+.||++.+.+++.++.|   +||+|++|.||.|..+.
T Consensus       158 --~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~  202 (297)
T d1yxma1         158 --GFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQT  202 (297)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTG
T ss_pred             --cccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcc
Confidence              2334678999999999999999988   68999999999998765

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.95  E-value=1.9e-27  Score=203.65  Aligned_cols=167  Identities=10%  Similarity=0.107  Sum_probs=135.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCC-CHHHHHHHhhc-----
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG-DAKAVNKFFSE-----  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~v~~~~~~-----  143 (296)
                      +|+||||||++|||+++|++|+++|++|++++|+..+.++. +.+....+ ..++.++.+|++ +.++++++++.     
T Consensus         5 gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~-~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   82 (254)
T d1sbya1           5 NKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTAL-AELKAINP-KVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHH-HHHHHHCT-TSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHH-HHHHhhCC-CCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence            49999999999999999999999999999998876554333 33333333 367899999998 66677776655     


Q ss_pred             CCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHH----HHHHHHHc---CCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLV----VLESMARH---GVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~----ll~~~~~~---~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      +++|+||||||..    .++..++.+++|+.++..    +++.|.+.   ..++||++||.+.+           .+.+.
T Consensus        83 g~iDilvnnAG~~----~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~-----------~~~~~  147 (254)
T d1sbya1          83 KTVDILINGAGIL----DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGF-----------NAIHQ  147 (254)
T ss_dssp             SCCCEEEECCCCC----CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT-----------SCCTT
T ss_pred             CCCCEEEeCCCCC----CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhc-----------cCCCC
Confidence            7899999999964    356788899999998555    55666554   24689999998876           34555


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecC
Q 022471          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGS  253 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp  253 (296)
                      ...|++||++...|++.++.+   +||++++|.||.|..|
T Consensus       148 ~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~  187 (254)
T d1sbya1         148 VPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTP  187 (254)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESH
T ss_pred             CHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCc
Confidence            789999999999999999988   7999999999999986

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4.1e-27  Score=201.95  Aligned_cols=177  Identities=16%  Similarity=0.090  Sum_probs=139.3

Q ss_pred             CCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----
Q 022471           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (296)
Q Consensus        68 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (296)
                      ..+|+||||||++|||+++|+.|+++|++|++++|+..+.+++.+++++... +.++.+++||++|++++++++++    
T Consensus         8 lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~-~~~~~~~~~Dls~~~~v~~~v~~~~~~   86 (257)
T d1xg5a_           8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGY-PGTLIPYRCDLSNEEDILSMFSAIRSQ   86 (257)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-SSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-CceEEEEEccCCCHHHHHHHHHHHHHh
Confidence            3449999999999999999999999999999999876666666666665433 25788999999999999988876    


Q ss_pred             -CCCcEEEEcccccCcCCC----CcChHHHHHHHHHHHH----HHHHHHHHcC--CCEEEEEcccccccCCCCCCCCCCC
Q 022471          144 -NAFDAVMHFAAVAYVGES----TLDPLKYYHNITSNTL----VVLESMARHG--VDTLIYSSTCATYGEPEKMPITEET  212 (296)
Q Consensus       144 -~~~D~vi~~Ag~~~~~~~----~~~~~~~~~~n~~~t~----~ll~~~~~~~--~~riV~~SS~~~~g~~~~~~~~e~~  212 (296)
                       +++|+||||||.....+.    .+.++..+++|+.+..    .+++.+++.+  .++||++||.+.+..         .
T Consensus        87 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~---------~  157 (257)
T d1xg5a_          87 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV---------L  157 (257)
T ss_dssp             HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC---------C
T ss_pred             cCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCC---------C
Confidence             789999999998665543    3444556778887744    4667666654  479999999876521         1


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc-----CCCcEEEEecCeeecCC
Q 022471          213 PQAPINPYGKAKKMAEDIILDFSKN-----SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       213 ~~~~~~~Y~~sK~~~e~~~~~~~~~-----~gi~~~~lrpg~v~Gp~  254 (296)
                      |......|+.+|++.+.+++.++.|     +||++++|.||.+-.+.
T Consensus       158 p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~  204 (257)
T d1xg5a_         158 PLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQF  204 (257)
T ss_dssp             SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSH
T ss_pred             CCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChh
Confidence            2233567999999999999999865     68999999999886653

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.95  E-value=6.4e-27  Score=209.14  Aligned_cols=201  Identities=21%  Similarity=0.197  Sum_probs=164.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +|+||||||||+||++++++|+++|++|++++|+..+.....+...    ...+++++.+|++|.+.+.++++...+|++
T Consensus         8 ~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~----~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v   83 (356)
T d1rkxa_           8 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR----VADGMQSEIGDIRDQNKLLESIREFQPEIV   83 (356)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT----TTTTSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhh----cccCCeEEEeeccChHhhhhhhhhchhhhh
Confidence            3999999999999999999999999999999987766554433321    125799999999999999999987789999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcccccccCC-CCCCCCCCCCCCCCChHHHHHHHH
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSSTCATYGEP-EKMPITEETPQAPINPYGKAKKMA  227 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS~~~~g~~-~~~~~~e~~~~~~~~~Y~~sK~~~  227 (296)
                      +|+|+......+.+.+...+++|+.++.++++++++.+.. .+++.||...+... ...+..|+.+..|..+|+.+|.+.
T Consensus        84 ~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~  163 (356)
T d1rkxa_          84 FHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCA  163 (356)
T ss_dssp             EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHH
T ss_pred             hhhhccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCccccccccc
Confidence            9999987766667788899999999999999999987654 55555555555433 445677777888999999999999


Q ss_pred             HHHHHHhhhc---------CCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          228 EDIILDFSKN---------SDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       228 e~~~~~~~~~---------~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      |..+..++.+         +++.++++||+++|||++...            ..+++.+++++.++.+
T Consensus       164 e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~------------~~~i~~~~~~~~~~~~  219 (356)
T d1rkxa_         164 ELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL------------DRIVPDILRAFEQSQP  219 (356)
T ss_dssp             HHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS------------SCHHHHHHHHHHTTCC
T ss_pred             hhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchh------------hHHHHHHHHHHhCCCc
Confidence            9999887654         478899999999999975311            2788999999988776

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.95  E-value=4.4e-27  Score=200.84  Aligned_cols=174  Identities=13%  Similarity=0.129  Sum_probs=134.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHH---hCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc---
Q 022471           70 VTHVLVTGGAGYIGSHAALRLL---KDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~---~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (296)
                      ||+||||||++|||+++|++|+   ++|++|++++|+..+.+++.+..+.    +.++.++.+|++|.+++++++++   
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~Dvs~~~~v~~~~~~i~~   77 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN----HSNIHILEIDLRNFDAYDKLVADIEG   77 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHH----CTTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhc----CCcEEEEEEEeccHHHHHHHHhhhHH
Confidence            7999999999999999999996   4799999999988776655443332    46899999999999988877653   


Q ss_pred             ----CCCcEEEEcccccCcCC-----CCcChHHHHHHHHHHHH----HHHHHHHHc-----------CCCEEEEEccccc
Q 022471          144 ----NAFDAVMHFAAVAYVGE-----STLDPLKYYHNITSNTL----VVLESMARH-----------GVDTLIYSSTCAT  199 (296)
Q Consensus       144 ----~~~D~vi~~Ag~~~~~~-----~~~~~~~~~~~n~~~t~----~ll~~~~~~-----------~~~riV~~SS~~~  199 (296)
                          +++|+||||||+.....     ..+..++.+++|+.++.    .+++.|++.           +.+++|++||...
T Consensus        78 ~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g  157 (248)
T d1snya_          78 VTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG  157 (248)
T ss_dssp             HHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGG
T ss_pred             HhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccc
Confidence                67999999999854432     22234557889999944    466666653           3579999999764


Q ss_pred             ccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          200 YGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       200 ~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      .-.        ..+.+....|+.||++...+++.++.+   .||++++|+||.|-.+..
T Consensus       158 ~~~--------~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~  208 (248)
T d1snya_         158 SIQ--------GNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMG  208 (248)
T ss_dssp             CST--------TCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTT
T ss_pred             ccC--------CCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcc
Confidence            310        123344668999999999999999877   789999999999988753

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.95  E-value=2.7e-27  Score=203.49  Aligned_cols=179  Identities=13%  Similarity=0.117  Sum_probs=137.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+||||||++|||+++|+.|+++|++|++++|+..+..+..+.+.+..  +.++.++++|++|.+++++++++     +
T Consensus         9 gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (260)
T d1h5qa_           9 NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF--GVKTKAYQCDVSNTDIVTKTIQQIDADLG   86 (260)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH--TCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh--CCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4999999999999999999999999999999998777666655554332  35788999999999999988865     7


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHH----HHHHHHHHc-CCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTL----VVLESMARH-GVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~----~ll~~~~~~-~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                      ++|++|||||.....+    ..+++++.+++|+.++.    .+++.|.+. ..++++.+||...+......    ..+.+
T Consensus        87 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~----~~~~~  162 (260)
T d1h5qa_          87 PISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS----LNGSL  162 (260)
T ss_dssp             SEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE----TTEEC
T ss_pred             CCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccc----cccCc
Confidence            8999999999865544    33445557788988854    456666544 44567777776554211100    01123


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ....|+.||++.+.+++.++.|   +||++++|.||.|-.+.
T Consensus       163 ~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~  204 (260)
T d1h5qa_         163 TQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQ  204 (260)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGG
T ss_pred             cccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcc
Confidence            4678999999999999999987   78999999999997764

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.95  E-value=4.8e-27  Score=203.60  Aligned_cols=167  Identities=14%  Similarity=0.147  Sum_probs=132.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|+||||||++|||+++|++|+++|++|++++|+..+   +.+..++.   +.++..+.+|+++.+++++++++     +
T Consensus         5 gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~---l~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   78 (276)
T d1bdba_           5 GEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAER---LAELETDH---GDNVLGIVGDVRSLEDQKQAASRCVARFG   78 (276)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHc---CCCeeEEecccccHHHHHHHHHHHHHHhC
Confidence            3999999999999999999999999999999976433   33333333   35788999999999999888765     7


Q ss_pred             CCcEEEEcccccCcCC-----CCc----ChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE-----STL----DPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE  211 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~-----~~~----~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~  211 (296)
                      ++|++|||||+.....     ..+    .+++.+++|+.+    ++.+++.|++++ +++|++||...+           
T Consensus        79 ~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~-----------  146 (276)
T d1bdba_          79 KIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGF-----------  146 (276)
T ss_dssp             CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGT-----------
T ss_pred             CcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhc-----------
Confidence            8999999999754321     122    245678899888    555677777776 689998887654           


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc--CCCcEEEEecCeeecCC
Q 022471          212 TPQAPINPYGKAKKMAEDIILDFSKN--SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       212 ~~~~~~~~Y~~sK~~~e~~~~~~~~~--~gi~~~~lrpg~v~Gp~  254 (296)
                      .+.+....|+.||++.+.+++.++.|  .+|++++|.||.|..+.
T Consensus       147 ~~~~~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~  191 (276)
T d1bdba_         147 YPNGGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDL  191 (276)
T ss_dssp             STTSSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCC
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCc
Confidence            23344678999999999999999988  55999999999997763

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=2e-27  Score=208.36  Aligned_cols=170  Identities=18%  Similarity=0.077  Sum_probs=131.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC------cchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG------NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~  143 (296)
                      +|++|||||++|||+++|++|+++|++|++.+++...      ...+.+..++..   .......+|++|.+++++++++
T Consensus         7 gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~v~~   83 (302)
T d1gz6a_           7 GRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIR---RRGGKAVANYDSVEAGEKLVKT   83 (302)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHH---HTTCEEEEECCCGGGHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHh---hcccccccccchHHHHHHHHHH
Confidence            3999999999999999999999999999999876432      222222223321   2334567888888777766654


Q ss_pred             -----CCCcEEEEcccccCcCC----CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCC
Q 022471          144 -----NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (296)
Q Consensus       144 -----~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e  210 (296)
                           +++|+||||||+....+    ..++++..+++|+.+    ++.+++.|++++.++||++||.+.+          
T Consensus        84 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~----------  153 (302)
T d1gz6a_          84 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGI----------  153 (302)
T ss_dssp             HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH----------
T ss_pred             HHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhc----------
Confidence                 78999999999876554    333445577899998    5557788888888899999998765          


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecC
Q 022471          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGS  253 (296)
Q Consensus       211 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp  253 (296)
                       .+.+....|++||++.+.+++.++.|   +||++++|.||.+-.+
T Consensus       154 -~~~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~  198 (302)
T d1gz6a_         154 -YGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRM  198 (302)
T ss_dssp             -HCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTT
T ss_pred             -CCCCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcc
Confidence             23345789999999999999999988   7899999999987443

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=2e-27  Score=204.27  Aligned_cols=173  Identities=14%  Similarity=0.079  Sum_probs=137.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHh---CCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc---
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLK---DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~---~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (296)
                      +|+++||||++|||+++|++|++   +|++|++++|+....+++.+++....+ +.++.++++|++|.++++++++.   
T Consensus         6 gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~-~~~~~~~~~Dvs~~~~v~~l~~~~~~   84 (259)
T d1oaaa_           6 CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQP-DLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCT-TSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcC-CceEEEEEccCCCHHHHHHHHHHHHH
Confidence            49999999999999999999986   799999999877666666666655433 25789999999999999888743   


Q ss_pred             ------CCCcEEEEcccccCc---CC----CCcChHHHHHHHHHHHHHHHHHH----HHcC--CCEEEEEcccccccCCC
Q 022471          144 ------NAFDAVMHFAAVAYV---GE----STLDPLKYYHNITSNTLVVLESM----ARHG--VDTLIYSSTCATYGEPE  204 (296)
Q Consensus       144 ------~~~D~vi~~Ag~~~~---~~----~~~~~~~~~~~n~~~t~~ll~~~----~~~~--~~riV~~SS~~~~g~~~  204 (296)
                            ..+|++|||||....   ..    ..+.+...+++|+.++..+.+++    ++++  .++||++||.+.+    
T Consensus        85 ~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~----  160 (259)
T d1oaaa_          85 LPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL----  160 (259)
T ss_dssp             SCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT----
T ss_pred             hhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccccccccc----
Confidence                  368899999997532   11    22345567889999966655555    4443  3589999998765    


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc-CCCcEEEEecCeeecCC
Q 022471          205 KMPITEETPQAPINPYGKAKKMAEDIILDFSKN-SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       205 ~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~gi~~~~lrpg~v~Gp~  254 (296)
                             .+.+....|+.||++.+.+++.++.| +||++++|.||.|.++.
T Consensus       161 -------~~~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~  204 (259)
T d1oaaa_         161 -------QPYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDM  204 (259)
T ss_dssp             -------SCCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHH
T ss_pred             -------CCCccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHH
Confidence                   34556789999999999999999988 89999999999998763

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.94  E-value=2.8e-26  Score=204.56  Aligned_cols=201  Identities=18%  Similarity=0.152  Sum_probs=148.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +|+||||||+|+||++++++|+++|++|+++.|+..+.....+..... ........+.+|++|.+++.+++  .++|+|
T Consensus        11 gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~--~~~~~v   87 (342)
T d1y1pa1          11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAK-YPGRFETAVVEDMLKQGAYDEVI--KGAAGV   87 (342)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-STTTEEEEECSCTTSTTTTTTTT--TTCSEE
T ss_pred             cCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhcc-ccccccEEEeccccchhhhhhhc--ccchhh
Confidence            499999999999999999999999999999988653333222221111 12234456779999999999888  679999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcccccccCC-C-C--CC----------------C
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATYGEP-E-K--MP----------------I  208 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-~~~riV~~SS~~~~g~~-~-~--~~----------------~  208 (296)
                      +|+|+....   .......+..|+.||.++++++.+. +++++|++||+++++.. + .  ..                .
T Consensus        88 ~~~a~~~~~---~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  164 (342)
T d1y1pa1          88 AHIASVVSF---SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTL  164 (342)
T ss_dssp             EECCCCCSC---CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHS
T ss_pred             hhhcccccc---cccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccc
Confidence            999997543   3456778889999999999999887 58999999997654321 1 1  11                2


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHhhhc--CCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          209 TEETPQAPINPYGKAKKMAEDIILDFSKN--SDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       209 ~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~--~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      .|+.+..|.++|+.||.++|.+++.++++  .++++++++|++||||...+.    ..      ...+..++..+.+++.
T Consensus       165 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~----~~------~~~~~~~~~~l~~g~~  234 (342)
T d1y1pa1         165 PESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPE----TQ------SGSTSGWMMSLFNGEV  234 (342)
T ss_dssp             CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTT----TC------CCHHHHHHHHHHTTCC
T ss_pred             cccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCcc----cc------ccchHHHHHHHHcCCc
Confidence            33445556778999999999999998876  467889999999999964322    11      1456666666666654

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.94  E-value=9.4e-26  Score=199.51  Aligned_cols=181  Identities=25%  Similarity=0.396  Sum_probs=144.9

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEEE
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMH  151 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi~  151 (296)
                      ||||||||||||++++++|+++|++|+++++..+....  +.+..+.. ..+++++.+|++|.+++.++++..++|+|||
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~--~~~~~~~~-~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih   78 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGAT--DNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKYMPDSCFH   78 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHH--HHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccch--hHHHHhhc-cCCcEEEEcccCCHHHHHHHHHhcCCceEEe
Confidence            69999999999999999999999999999864433221  12222211 3679999999999999999997777999999


Q ss_pred             cccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccc-cccCCCCCC----------------CCCCCCC
Q 022471          152 FAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCA-TYGEPEKMP----------------ITEETPQ  214 (296)
Q Consensus       152 ~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~-~~g~~~~~~----------------~~e~~~~  214 (296)
                      +|+.........++...+++|+.||.++++++.+.+.+++|+.||.. .++.....+                ..+..+.
T Consensus        79 ~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (338)
T d1orra_          79 LAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQL  158 (338)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCC
T ss_pred             ecccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCcc
Confidence            99987766666788899999999999999999999987766666654 444332211                2233455


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCC
Q 022471          215 APINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                      .|.+.|+.+|...|.+.......++.....+++.++|++..
T Consensus       159 ~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (338)
T d1orra_         159 DFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQ  199 (338)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTC
T ss_pred             ccccccccccchhhhhhhhhhhccCcccccccccceeeccc
Confidence            67889999999999999999888999999999999998874

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.94  E-value=2.2e-26  Score=197.61  Aligned_cols=173  Identities=20%  Similarity=0.147  Sum_probs=130.1

Q ss_pred             CCCCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-cchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-
Q 022471           66 HEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG-NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-  143 (296)
Q Consensus        66 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-  143 (296)
                      ++.| |+||||||++|||+++|++|+++|++|++.+++..+ .++..+.+++   .+.++.++.+|++|.+++++++++ 
T Consensus         3 ~L~G-K~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~---~g~~~~~~~~D~~~~~~v~~~~~~~   78 (259)
T d1ja9a_           3 PLAG-KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKK---LGAQGVAIQADISKPSEVVALFDKA   78 (259)
T ss_dssp             TTTT-CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH---TTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCC-CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHH---cCCCceEecCCCCCHHHHHHHHHHH
Confidence            3445 999999999999999999999999999987754322 3333444433   356789999999999999888865 


Q ss_pred             ----CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccc-cccCCCCCCCCCCC
Q 022471          144 ----NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCA-TYGEPEKMPITEET  212 (296)
Q Consensus       144 ----~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~-~~g~~~~~~~~e~~  212 (296)
                          +++|++|||||.....+    ..+.++..+++|+.+...+++.+.+.  ..+++++++|.. .+           .
T Consensus        79 ~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~-----------~  147 (259)
T d1ja9a_          79 VSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVM-----------T  147 (259)
T ss_dssp             HHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTC-----------C
T ss_pred             HHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccc-----------c
Confidence                78999999999865544    33444557778888865555444432  124666665543 33           2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecC
Q 022471          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGS  253 (296)
Q Consensus       213 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp  253 (296)
                      +.+....|+.||.+.+.+++.++.|   +||++++|.||++..+
T Consensus       148 ~~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~  191 (259)
T d1ja9a_         148 GIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTD  191 (259)
T ss_dssp             SCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccCh
Confidence            2344678999999999999999988   7899999999999764

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.94  E-value=2e-26  Score=194.93  Aligned_cols=160  Identities=16%  Similarity=0.139  Sum_probs=126.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-CCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~  148 (296)
                      +|+||||||++|||+++|++|+++|++|++++|+..       .+++     ....++.+|+++.  ++.++++ +++|+
T Consensus         4 gK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~-------~l~~-----~~~~~~~~Dv~~~--~~~~~~~~g~iD~   69 (234)
T d1o5ia_           4 DKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEE-------LLKR-----SGHRYVVCDLRKD--LDLLFEKVKEVDI   69 (234)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH-------HHHH-----TCSEEEECCTTTC--HHHHHHHSCCCSE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHH-------HHHh-----cCCcEEEcchHHH--HHHHHHHhCCCcE
Confidence            399999999999999999999999999999997531       2222     2345778999864  4444444 78999


Q ss_pred             EEEcccccCcCCC----CcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChH
Q 022471          149 VMHFAAVAYVGES----TLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (296)
Q Consensus       149 vi~~Ag~~~~~~~----~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (296)
                      +|||||.....+.    .+++++.+++|+.+    ++.+++.|++++.+++|++||....           .+.+....|
T Consensus        70 lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~-----------~~~~~~~~Y  138 (234)
T d1o5ia_          70 LVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVI-----------SPIENLYTS  138 (234)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-----------SCCTTBHHH
T ss_pred             EEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccccc-----------ccccccccc
Confidence            9999998655443    33445567788887    5567778888888899999997765           344557799


Q ss_pred             HHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          221 GKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       221 ~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +.||.+.+.+++.++.|   +||++++|.||.+..+.
T Consensus       139 ~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~  175 (234)
T d1o5ia_         139 NSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETER  175 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred             hhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhh
Confidence            99999999999999988   79999999999998775

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.94  E-value=8e-26  Score=195.49  Aligned_cols=173  Identities=16%  Similarity=0.157  Sum_probs=132.2

Q ss_pred             CCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-cchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc---
Q 022471           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG-NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (296)
Q Consensus        68 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (296)
                      ..+|++|||||++|||++++++|+++|++|++++|+..+ .++..+.+++   .+.++.++++|++|.+++++++++   
T Consensus        16 L~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~---~g~~~~~~~~D~~~~~~v~~~~~~~~~   92 (272)
T d1g0oa_          16 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKK---NGSDAACVKANVGVVEDIVRMFEEAVK   92 (272)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHh---hCCceeeEeCCCCCHHHHHHHHHHHHH
Confidence            344999999999999999999999999999999875432 2223333333   356789999999999999988876   


Q ss_pred             --CCCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 --NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 --~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                        +++|++|||||......    ..+...+.+++|+.++..+.+++.+.  ..+++++++|.....          .+..
T Consensus        93 ~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~----------~~~~  162 (272)
T d1g0oa_          93 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQA----------KAVP  162 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTC----------SSCS
T ss_pred             HhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccc----------cccc
Confidence              78999999999865544    33344556778888866665555432  235788887754321          2234


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGS  253 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp  253 (296)
                      ....|+.||++.+.+++.++.|   +||+|++|.||.|-++
T Consensus       163 ~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~  203 (272)
T d1g0oa_         163 KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTD  203 (272)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH
T ss_pred             chhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCCh
Confidence            4678999999999999999988   7999999999999764

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.94  E-value=1.3e-26  Score=198.34  Aligned_cols=164  Identities=14%  Similarity=0.130  Sum_probs=129.0

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----CCC
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NAF  146 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~~  146 (296)
                      ++|||||++|||+++|+.|+++|++|++.+|+....+++.....         .+..+|++|.+++++++++     +++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~---------~~~~~dv~~~~~~~~~~~~~~~~~G~i   72 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAE---------TYPQLKPMSEQEPAELIEAVTSAYGQV   72 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHH---------HCTTSEECCCCSHHHHHHHHHHHHSCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhC---------cEEEeccCCHHHHHHHHHHHHHHcCCC
Confidence            79999999999999999999999999999987655444332211         2335888888777776654     789


Q ss_pred             cEEEEcccccCc-CC----CCcChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCC
Q 022471          147 DAVMHFAAVAYV-GE----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (296)
Q Consensus       147 D~vi~~Ag~~~~-~~----~~~~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (296)
                      |++|||||.... .+    ..+++.+.+++|+.+    ++.+++.|++++.++||++||.+.+           .+.+..
T Consensus        73 DiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~-----------~~~~~~  141 (252)
T d1zmta1          73 DVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPF-----------GPWKEL  141 (252)
T ss_dssp             CEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTT-----------SCCTTC
T ss_pred             CEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccc-----------cccccc
Confidence            999999997532 33    233445567788887    5557778888888899999998765           234446


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       218 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      .+|+.||.+.+.+++.++.|   +||++++|.||.|..+..
T Consensus       142 ~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~  182 (252)
T d1zmta1         142 STYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDS  182 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTC
T ss_pred             cccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcch
Confidence            78999999999999999988   799999999999988753

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=4.3e-26  Score=194.15  Aligned_cols=167  Identities=16%  Similarity=0.112  Sum_probs=132.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-CCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~  148 (296)
                      +|++|||||++|||+++++.|+++|++|++++|++.+.++    +.+    ...+....+|+.+.+.++...+. +++|+
T Consensus         6 gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~----~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~id~   77 (245)
T d2ag5a1           6 GKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQE----LEK----YPGIQTRVLDVTKKKQIDQFANEVERLDV   77 (245)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGG----GGG----STTEEEEECCTTCHHHHHHHHHHCSCCSE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH----HHh----ccCCceeeeecccccccccccccccccee
Confidence            4999999999999999999999999999999986433222    222    24678889999999888887766 78999


Q ss_pred             EEEcccccCcCCC----CcChHHHHHHHHHHHHH----HHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChH
Q 022471          149 VMHFAAVAYVGES----TLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (296)
Q Consensus       149 vi~~Ag~~~~~~~----~~~~~~~~~~n~~~t~~----ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (296)
                      ||||||.....+.    .+.+...+++|+.++..    +++.|.+.+.++||++||....          ..+......|
T Consensus        78 lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~----------~~~~~~~~~Y  147 (245)
T d2ag5a1          78 LFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASS----------VKGVVNRCVY  147 (245)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT----------TBCCTTBHHH
T ss_pred             EEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhc----------cCCccchhHH
Confidence            9999998766543    33445567788888444    5666777777899999986531          1234457889


Q ss_pred             HHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          221 GKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       221 ~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      +.+|++.+.+++.++.|   +||++++|.||.|-+|.
T Consensus       148 ~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~  184 (245)
T d2ag5a1         148 STTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPS  184 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechh
Confidence            99999999999999988   79999999999998765

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.93  E-value=2.3e-26  Score=195.37  Aligned_cols=167  Identities=20%  Similarity=0.179  Sum_probs=130.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (296)
                      +|++|||||++|||+++|++|+++|++|++++|+...   +.+.++++   +.++.++++|+++.+++++++++     +
T Consensus         5 gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~---~~~~~~~~---~~~~~~~~~Dls~~~~i~~~~~~i~~~~g   78 (241)
T d2a4ka1           5 GKTILVTGAASGIGRAALDLFAREGASLVAVDREERL---LAEAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEEFG   78 (241)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHc---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            3999999999999999999999999999999976543   33333433   35788999999999999988876     7


Q ss_pred             CCcEEEEcccccCcCC----CCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCCCCCCCC
Q 022471          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (296)
Q Consensus       145 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (296)
                      ++|++|||||.....+    ..+.+.+.+++|+.+...+.+++.+.  ..+.++++||.+..            +.+...
T Consensus        79 ~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~------------~~~~~~  146 (241)
T d2a4ka1          79 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL------------GAFGLA  146 (241)
T ss_dssp             CCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC------------CHHHHH
T ss_pred             CccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccc------------cccCcc
Confidence            8999999999865544    33344556788999877766665443  23466667765542            223366


Q ss_pred             hHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          219 PYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       219 ~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      .|+.+|++.+.+++.++.|   +||++++|.||.|-.+.
T Consensus       147 ~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~  185 (241)
T d2a4ka1         147 HYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPM  185 (241)
T ss_dssp             HHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGG
T ss_pred             ccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHH
Confidence            8999999999999999998   78999999999997764

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.4e-25  Score=193.70  Aligned_cols=172  Identities=15%  Similarity=0.110  Sum_probs=136.9

Q ss_pred             CCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----
Q 022471           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (296)
Q Consensus        68 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (296)
                      ..+|+|||||||+|||+++|++|+++|++|++++|+..+.++..+++....  +..+..+.+|+++.+.+..+.+.    
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~   89 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG--AASAHYIAGTMEDMTFAEQFVAQAGKL   89 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT--CSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhh--cccchhhhhhhhhHHHHHHHHHHHHHH
Confidence            344999999999999999999999999999999987666555555444332  35788899999999888776654    


Q ss_pred             -CCCcEEEEcccccCcCCCCc----ChHHHHHHHHHH----HHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCC
Q 022471          144 -NAFDAVMHFAAVAYVGESTL----DPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (296)
Q Consensus       144 -~~~D~vi~~Ag~~~~~~~~~----~~~~~~~~n~~~----t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~  214 (296)
                       +.+|+++||||........+    .....+++|+.+    ++.+++.|++.+ +++|++||.+.+           .+.
T Consensus        90 ~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~-G~ii~isS~~~~-----------~~~  157 (269)
T d1xu9a_          90 MGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGK-----------VAY  157 (269)
T ss_dssp             HTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEGGGT-----------SCC
T ss_pred             hCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcC-CcceEeccchhc-----------CCC
Confidence             78999999999865544333    334467888888    555777776554 799999998765           345


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc-----CCCcEEEEecCeeecC
Q 022471          215 APINPYGKAKKMAEDIILDFSKN-----SDMAVMILRYFNVIGS  253 (296)
Q Consensus       215 ~~~~~Y~~sK~~~e~~~~~~~~~-----~gi~~~~lrpg~v~Gp  253 (296)
                      +...+|+.||++.+.+++.++.|     .||+++.+.||.|-.+
T Consensus       158 p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~  201 (269)
T d1xu9a_         158 PMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE  201 (269)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCc
Confidence            56789999999999999999977     4799999999999775

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.93  E-value=4.9e-26  Score=195.16  Aligned_cols=171  Identities=16%  Similarity=0.088  Sum_probs=128.5

Q ss_pred             ccEEEEEcCCC--hhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----
Q 022471           70 VTHVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (296)
Q Consensus        70 ~k~vlVTGasG--~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (296)
                      +|++|||||+|  |||+++|++|+++|++|++.+|++...+...+...    ...+..++++|++|.+++++++++    
T Consensus         8 gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (256)
T d1ulua_           8 GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAE----ALGGALLFRADVTQDEELDALFAGVKEA   83 (256)
T ss_dssp             TCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHH----HTTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhh----ccCcccccccccCCHHHHHHHHHHHHHh
Confidence            39999999987  99999999999999999999876433332222222    235678899999999999988765    


Q ss_pred             -CCCcEEEEcccccCcC----C----CCcChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCC
Q 022471          144 -NAFDAVMHFAAVAYVG----E----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEET  212 (296)
Q Consensus       144 -~~~D~vi~~Ag~~~~~----~----~~~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~  212 (296)
                       +++|++|||||.....    .    ..+++...+++|+.++..+.+++.+.  ..++||++||....           .
T Consensus        84 ~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~-----------~  152 (256)
T d1ulua_          84 FGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASE-----------K  152 (256)
T ss_dssp             HSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGT-----------S
T ss_pred             cCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhc-----------C
Confidence             7899999999974321    1    22234456788888877777665432  23689999997765           3


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       213 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      +.+...+|+.||++.+.+++.++.|   +||++++|.||.|..+..
T Consensus       153 ~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~  198 (256)
T d1ulua_         153 VVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAA  198 (256)
T ss_dssp             BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccc
Confidence            3445789999999999999999988   799999999999988753

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.6e-26  Score=198.04  Aligned_cols=183  Identities=16%  Similarity=0.072  Sum_probs=137.3

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (296)
                      |++++|||||++|||+++|++|+++ |++|++.+|+..+.+++.++++..   +.++.++++|++|.+++++++++    
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dvs~~~sv~~~~~~~~~~   78 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE---GLSPRFHQLDIDDLQSIRALRDFLRKE   78 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEEecCCHHHHHHHHHHHHHh
Confidence            4456799999999999999999986 899999998877766666666554   46789999999999999988765    


Q ss_pred             -CCCcEEEEcccccCcCCCCcC----hHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCC-CCCC--------
Q 022471          144 -NAFDAVMHFAAVAYVGESTLD----PLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEP-EKMP--------  207 (296)
Q Consensus       144 -~~~D~vi~~Ag~~~~~~~~~~----~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~-~~~~--------  207 (296)
                       +++|+||||||+.......+.    .+..+++|+.++..+.+++.+.  ..++||++||...+... ...+        
T Consensus        79 ~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~  158 (275)
T d1wmaa1          79 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRS  158 (275)
T ss_dssp             HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHC
T ss_pred             cCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcc
Confidence             789999999998765443333    3446789999977766666432  23699999996543110 0000        


Q ss_pred             ---------------------CCCCCCCCCCChHHHHHHHHHHHHHHhhhc-------CCCcEEEEecCeeecCC
Q 022471          208 ---------------------ITEETPQAPINPYGKAKKMAEDIILDFSKN-------SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       208 ---------------------~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~-------~gi~~~~lrpg~v~Gp~  254 (296)
                                           .....+..+...|+.||++...+++.++.+       .||++++++||+|..+-
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m  233 (275)
T d1wmaa1         159 ETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM  233 (275)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTT
T ss_pred             cccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCc
Confidence                                 000122335678999999999999887765       48999999999998765

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.93  E-value=1.6e-25  Score=192.15  Aligned_cols=172  Identities=18%  Similarity=0.178  Sum_probs=139.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~  145 (296)
                      +++|||||+||||++++++|+++|+ +|++++|+..+.+...+.++++...+.++.++.+|++|.++++++++.    .+
T Consensus        10 gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~~   89 (259)
T d2fr1a1          10 GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVP   89 (259)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccccc
Confidence            7999999999999999999999999 588888876555555555555444457899999999999999998865    57


Q ss_pred             CcEEEEcccccCcCCCCcC----hHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHH
Q 022471          146 FDAVMHFAAVAYVGESTLD----PLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYG  221 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~~~~~----~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~  221 (296)
                      +|.||||||........+.    ....++.|+.++.++.+++.+.+.++||++||.+.+           .+.+....|+
T Consensus        90 i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~-----------~g~~~~~~Ya  158 (259)
T d2fr1a1          90 LSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASA-----------FGAPGLGGYA  158 (259)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHH-----------TCCTTCTTTH
T ss_pred             ccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhc-----------cCCcccHHHH
Confidence            9999999998765543333    344677899999999999888888899999998765           2344577899


Q ss_pred             HHHHHHHHHHHHhhhcCCCcEEEEecCeeecCC
Q 022471          222 KAKKMAEDIILDFSKNSDMAVMILRYFNVIGSD  254 (296)
Q Consensus       222 ~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~  254 (296)
                      ++|.+.+.++++++. .|+++++|.||.+.+++
T Consensus       159 Aaka~l~~la~~~~~-~Gi~v~~I~pg~~~~~g  190 (259)
T d2fr1a1         159 PGNAYLDGLAQQRRS-DGLPATAVAWGTWAGSG  190 (259)
T ss_dssp             HHHHHHHHHHHHHHH-TTCCCEEEEECCBC---
T ss_pred             HHHHhHHHHHHHHHh-CCCCEEECCCCcccCCc
Confidence            999999999999876 69999999999988765

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.93  E-value=4.1e-25  Score=188.71  Aligned_cols=174  Identities=16%  Similarity=0.130  Sum_probs=125.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      |+||||||++|||+++|++|+++|+  +|++.+|+..+.++    +++..  +.+++++.+|++|.+++++++++     
T Consensus         4 KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~----l~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   77 (250)
T d1yo6a1           4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE----LKSIK--DSRVHVLPLTVTCDKSLDTFVSKVGEIV   77 (250)
T ss_dssp             SEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHH----HHTCC--CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHH----HHHhh--CCceEEEEEecCCHHHHHHHHHHHHHHh
Confidence            8999999999999999999999996  67777876544332    22222  35799999999999999887764     


Q ss_pred             --CCCcEEEEcccccCc-CC----CCcChHHHHHHHHHHHHH----HHHHHHHcC-----------CCEEEEEccccccc
Q 022471          144 --NAFDAVMHFAAVAYV-GE----STLDPLKYYHNITSNTLV----VLESMARHG-----------VDTLIYSSTCATYG  201 (296)
Q Consensus       144 --~~~D~vi~~Ag~~~~-~~----~~~~~~~~~~~n~~~t~~----ll~~~~~~~-----------~~riV~~SS~~~~g  201 (296)
                        .++|+||||||+... ..    ..+..++.+++|+.++..    +++.|++.+           .++++++|+...+-
T Consensus        78 ~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~  157 (250)
T d1yo6a1          78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI  157 (250)
T ss_dssp             GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred             CCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccc
Confidence              359999999997543 22    223345688999999554    566665532           25788888865542


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          202 EPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       202 ~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      .....    ..+..+...|+.||++...+++.++.|   .||++++|+||.|-.+-
T Consensus       158 ~~~~~----~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m  209 (250)
T d1yo6a1         158 TDNTS----GSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNL  209 (250)
T ss_dssp             TTCCS----TTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----
T ss_pred             cCCcc----cccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCC
Confidence            11110    122334567999999999999999987   78999999999997764

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.93  E-value=7.7e-25  Score=191.27  Aligned_cols=176  Identities=14%  Similarity=0.095  Sum_probs=131.7

Q ss_pred             CCCCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc--
Q 022471           66 HEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--  143 (296)
Q Consensus        66 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~--  143 (296)
                      +..+ |++|||||+||||+++|++|+++|++|++++|+..+.++..+.+.+..  +.++.++.+|+++.++++++++.  
T Consensus        22 ~l~g-K~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~--g~~~~~~~~D~~~~~~v~~~~~~~~   98 (294)
T d1w6ua_          22 SFQG-KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT--GNKVHAIQCDVRDPDMVQNTVSELI   98 (294)
T ss_dssp             TTTT-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--SSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCC-CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhc--CCceEEEEecccChHHHHHHhhhhh
Confidence            3444 999999999999999999999999999999987666555555554432  35788999999999999887755  


Q ss_pred             ---CCCcEEEEcccccCcCCCCcC----hHHHHHHHHHHHHHH----HHHHHH-cCCCEEEEEcccccccCCCCCCCCCC
Q 022471          144 ---NAFDAVMHFAAVAYVGESTLD----PLKYYHNITSNTLVV----LESMAR-HGVDTLIYSSTCATYGEPEKMPITEE  211 (296)
Q Consensus       144 ---~~~D~vi~~Ag~~~~~~~~~~----~~~~~~~n~~~t~~l----l~~~~~-~~~~riV~~SS~~~~g~~~~~~~~e~  211 (296)
                         +++|++|||||..........    ....+.+|..+...+    +..+.. ...+.++.+||....           
T Consensus        99 ~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~-----------  167 (294)
T d1w6ua_          99 KVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAE-----------  167 (294)
T ss_dssp             HHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHH-----------
T ss_pred             hhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhh-----------
Confidence               789999999998665443333    334556676664443    333333 334567777776554           


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       212 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      .+.+...+|+.||.+.+.+++.++.|   +||+|++|.||.|..+..
T Consensus       168 ~~~~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~  214 (294)
T d1w6ua_         168 TGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGA  214 (294)
T ss_dssp             HCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC---
T ss_pred             hcccccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchh
Confidence            22334678999999999999999988   789999999999988764

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.92  E-value=2.2e-24  Score=186.06  Aligned_cols=171  Identities=22%  Similarity=0.237  Sum_probs=148.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+||||||||+||++|+++|.++|++|++++|+                        .+|++|.++++++++..++|+||
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~------------------------~~D~~d~~~~~~~l~~~~~d~vi   57 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQ------------------------DLDITNVLAVNKFFNEKKPNVVI   57 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT------------------------TCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeech------------------------hccCCCHHHHHHHHHHcCCCEEE
Confidence            679999999999999999999999999998752                        15899999999999877899999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  230 (296)
                      |+|+......+...+......|+..+..+++.+.... ..++++||..+|+.....+.+|.++..+...|+.+|...|.+
T Consensus        58 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~  136 (281)
T d1vl0a_          58 NCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-AEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENF  136 (281)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-CEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             eeccccccccccccchhhccccccccccccccccccc-ccccccccceeeeccccccccccccccchhhhhhhhhHHHHH
Confidence            9999876666666777888899999999998888776 588899999999988888899999999999999999999998


Q ss_pred             HHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          231 ILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       231 ~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      ++.    .+.+.+++||++||||+.                .++..+++.+.++.+
T Consensus       137 ~~~----~~~~~~i~R~~~vyG~~~----------------~~~~~~~~~~~~~~~  172 (281)
T d1vl0a_         137 VKA----LNPKYYIVRTAWLYGDGN----------------NFVKTMINLGKTHDE  172 (281)
T ss_dssp             HHH----HCSSEEEEEECSEESSSS----------------CHHHHHHHHHHHCSE
T ss_pred             HHH----hCCCccccceeEEeCCCc----------------ccccchhhhhccCCc
Confidence            876    578899999999999973                567777887777765

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=8.4e-24  Score=175.04  Aligned_cols=158  Identities=15%  Similarity=0.184  Sum_probs=127.2

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      .||||+||||||+||++++++|+++|++|+++.|++.+....         ...+++++.+|++|.+++.+++  .++|+
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~---------~~~~~~~~~gD~~d~~~l~~al--~~~d~   70 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE---------GPRPAHVVVGDVLQAADVDKTV--AGQDA   70 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS---------SCCCSEEEESCTTSHHHHHHHH--TTCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc---------cccccccccccccchhhHHHHh--cCCCE
Confidence            368999999999999999999999999999999876543211         1256889999999999999999  67999


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e  228 (296)
                      |||++|......       ..+.+..+++++++++++.+++|+|++||..+++....       .......|...|..+|
T Consensus        71 vi~~~g~~~~~~-------~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~-------~~~~~~~~~~~~~~~e  136 (205)
T d1hdoa_          71 VIVLLGTRNDLS-------PTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTK-------VPPRLQAVTDDHIRMH  136 (205)
T ss_dssp             EEECCCCTTCCS-------CCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTC-------SCGGGHHHHHHHHHHH
T ss_pred             EEEEeccCCchh-------hhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCcc-------ccccccccchHHHHHH
Confidence            999998643221       12356778999999999999999999999888754332       1223457889999999


Q ss_pred             HHHHHhhhcCCCcEEEEecCeeecCCC
Q 022471          229 DIILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       229 ~~~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                      .+++.    .+++++++||+.+++...
T Consensus       137 ~~l~~----~~~~~tiirp~~~~~~~~  159 (205)
T d1hdoa_         137 KVLRE----SGLKYVAVMPPHIGDQPL  159 (205)
T ss_dssp             HHHHH----TCSEEEEECCSEEECCCC
T ss_pred             HHHHh----cCCceEEEecceecCCCC
Confidence            88765    799999999999987543

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=5.3e-24  Score=181.42  Aligned_cols=169  Identities=19%  Similarity=0.182  Sum_probs=132.1

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (296)
                      .+|++|||||++|||+++|++|+++|++|++++|+....++..+.   +   +.+.....+|+.+.+++++....     
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~---l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKK---L---GNNCVFAPADVTSEKDVQTALALAKGKF   77 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHH---H---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH---h---CCCccccccccccccccccccccccccc
Confidence            349999999999999999999999999999999877655544433   3   25678889999998877766544     


Q ss_pred             CCCcEEEEcccccCcCC----------CCcChHHHHHHHHHHHHHHHHHHHH----c------CCCEEEEEcccccccCC
Q 022471          144 NAFDAVMHFAAVAYVGE----------STLDPLKYYHNITSNTLVVLESMAR----H------GVDTLIYSSTCATYGEP  203 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~----------~~~~~~~~~~~n~~~t~~ll~~~~~----~------~~~riV~~SS~~~~g~~  203 (296)
                      ...|.+++++++.....          ..+.+.+.+++|+.++..+.+++.+    .      +.++||++||.+.+   
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~---  154 (248)
T d2o23a1          78 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAF---  154 (248)
T ss_dssp             SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHH---
T ss_pred             ccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhc---
Confidence            67999999987644321          2234556788999987766655533    2      34589999998876   


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          204 EKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       204 ~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                              .+.++..+|+.||++.+.+++.++.|   +||++++|.||.+..+.
T Consensus       155 --------~~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~  200 (248)
T d2o23a1         155 --------EGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPL  200 (248)
T ss_dssp             --------HCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-
T ss_pred             --------cCCCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecch
Confidence                    34455789999999999999999988   78999999999998775

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.91  E-value=2.8e-24  Score=181.92  Aligned_cols=161  Identities=14%  Similarity=0.133  Sum_probs=120.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc------
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------  143 (296)
                      +|+||||||+||||+++++.|+++|++|++++++.....             .......+|..+.++.+.+...      
T Consensus         2 gK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (236)
T d1dhra_           2 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-------------SASVIVKMTDSFTEQADQVTAEVGKLLG   68 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-------------SEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-------------cccceeecccCcHHHHHHHHHHHHHHhC
Confidence            399999999999999999999999999999987553321             2334456677666555443322      


Q ss_pred             -CCCcEEEEcccccCc-CCCC----cChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCCCCC
Q 022471          144 -NAFDAVMHFAAVAYV-GEST----LDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQA  215 (296)
Q Consensus       144 -~~~D~vi~~Ag~~~~-~~~~----~~~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~~~~  215 (296)
                       .++|+||||||.... ....    +..+..+++|+.++..+..++.+.  +.++||++||.+.+           .+.+
T Consensus        69 ~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~-----------~~~~  137 (236)
T d1dhra_          69 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAAL-----------DGTP  137 (236)
T ss_dssp             TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG-----------SCCT
T ss_pred             CCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHc-----------CCcc
Confidence             579999999996432 2222    334456788998876655555432  23699999998765           3444


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc-----CCCcEEEEecCeeecCC
Q 022471          216 PINPYGKAKKMAEDIILDFSKN-----SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       216 ~~~~Y~~sK~~~e~~~~~~~~~-----~gi~~~~lrpg~v~Gp~  254 (296)
                      ...+|+.||++.+.+++.++.|     .||++++|.||.|..|.
T Consensus       138 ~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~  181 (236)
T d1dhra_         138 GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM  181 (236)
T ss_dssp             TBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCc
Confidence            5789999999999999999987     47999999999998875

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=9.7e-24  Score=178.00  Aligned_cols=156  Identities=12%  Similarity=0.060  Sum_probs=126.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      |+||||||||+||++++++|+++|.  +|++++|++.+.....         ...+....+|+.+.+++.+++  .++|+
T Consensus        15 k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~---------~~~i~~~~~D~~~~~~~~~~~--~~~d~   83 (232)
T d2bkaa1          15 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA---------YKNVNQEVVDFEKLDDYASAF--QGHDV   83 (232)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG---------GGGCEEEECCGGGGGGGGGGG--SSCSE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc---------cceeeeeeecccccccccccc--ccccc
Confidence            7899999999999999999999995  8999998764432111         146777889999988888888  67999


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e  228 (296)
                      +||+||....   .....+++++|+.++.++++++.+.++++||++||..++.             .+.+.|+.+|..+|
T Consensus        84 vi~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~-------------~~~~~Y~~~K~~~E  147 (232)
T d2bkaa1          84 GFCCLGTTRG---KAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADK-------------SSNFLYLQVKGEVE  147 (232)
T ss_dssp             EEECCCCCHH---HHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT-------------TCSSHHHHHHHHHH
T ss_pred             cccccccccc---ccchhhhhhhcccccceeeecccccCccccccCCcccccc-------------CccchhHHHHHHhh
Confidence            9999986422   2245567889999999999999999999999999987652             23468999999999


Q ss_pred             HHHHHhhhcCCC-cEEEEecCeeecCCCCC
Q 022471          229 DIILDFSKNSDM-AVMILRYFNVIGSDPEG  257 (296)
Q Consensus       229 ~~~~~~~~~~gi-~~~~lrpg~v~Gp~~~~  257 (296)
                      ..++.    .+. +++++|||.+||+++..
T Consensus       148 ~~l~~----~~~~~~~IlRP~~i~G~~~~~  173 (232)
T d2bkaa1         148 AKVEE----LKFDRYSVFRPGVLLCDRQES  173 (232)
T ss_dssp             HHHHT----TCCSEEEEEECCEEECTTGGG
T ss_pred             hcccc----ccccceEEecCceeecCCCcC
Confidence            88765    455 48999999999997543

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.90  E-value=1.3e-23  Score=177.55  Aligned_cols=160  Identities=17%  Similarity=0.174  Sum_probs=117.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHh-------hc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFF-------SE  143 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~-------~~  143 (296)
                      .+||||||++|||++++++|+++|++|++++|+..+..             .......+|+.+.+......       +.
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-------------DSNILVDGNKNWTEQEQSILEQTASSLQG   69 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-------------SEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc-------------cccceeccccCchhHHHHHHHHHHHHhcC
Confidence            57899999999999999999999999999998654321             22334456776655443322       22


Q ss_pred             CCCcEEEEcccccCcC-CCCcC----hHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCCCCCCC
Q 022471          144 NAFDAVMHFAAVAYVG-ESTLD----PLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~-~~~~~----~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~~~~~~  216 (296)
                      +++|+||||||..... ...++    .+..+++|+.++..+.+++.+.  ..++||++||...+           .+.+.
T Consensus        70 g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~-----------~~~~~  138 (235)
T d1ooea_          70 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAM-----------GPTPS  138 (235)
T ss_dssp             CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG-----------SCCTT
T ss_pred             CCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhc-----------CCccc
Confidence            7799999999974332 22222    3346788998866655555432  23689999998765           34455


Q ss_pred             CChHHHHHHHHHHHHHHhhhc-----CCCcEEEEecCeeecCC
Q 022471          217 INPYGKAKKMAEDIILDFSKN-----SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       217 ~~~Y~~sK~~~e~~~~~~~~~-----~gi~~~~lrpg~v~Gp~  254 (296)
                      ..+|++||++.+.|++.++.|     .+++++.+.||.+..+.
T Consensus       139 ~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~  181 (235)
T d1ooea_         139 MIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM  181 (235)
T ss_dssp             BHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH
T ss_pred             ccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcc
Confidence            789999999999999999877     47899999999998864

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.89  E-value=5.2e-23  Score=178.38  Aligned_cols=157  Identities=20%  Similarity=0.229  Sum_probs=131.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+||||||||+||++|+++|.++|+.| .++++...                    +.+|++|.+.++++++..++|+||
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~~--------------------~~~Dl~~~~~~~~~i~~~~~D~Vi   59 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSKE--------------------FCGDFSNPKGVAETVRKLRPDVIV   59 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCSS--------------------SCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCcc--------------------ccCcCCCHHHHHHHHHHcCCCEEE
Confidence            579999999999999999999998755 44432211                    247999999999999877899999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  230 (296)
                      |+||......++..+...++.|+.++..+++++++.+ .+++++||+.+|+.....+.+|+.+..|.+.|+.+|.++|.+
T Consensus        60 h~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~  138 (298)
T d1n2sa_          60 NAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG-AWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKA  138 (298)
T ss_dssp             ECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHH
T ss_pred             EecccccccccccCccccccccccccccchhhhhccc-cccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhh
Confidence            9999887767788889999999999999999998876 489999999999888888899999999999999999999998


Q ss_pred             HHHhhhcCCCcEEEEecCeeecC
Q 022471          231 ILDFSKNSDMAVMILRYFNVIGS  253 (296)
Q Consensus       231 ~~~~~~~~gi~~~~lrpg~v~Gp  253 (296)
                      .+...    ....+++++..|+.
T Consensus       139 ~~~~~----~~~~~~~~~~~~~~  157 (298)
T d1n2sa_         139 LQDNC----PKHLIFRTSWVYAG  157 (298)
T ss_dssp             HHHHC----SSEEEEEECSEECS
T ss_pred             HHhhh----cccccccccceeec
Confidence            87643    34556666665543

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.89  E-value=1.6e-22  Score=175.29  Aligned_cols=170  Identities=16%  Similarity=0.079  Sum_probs=120.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-cchhhhhhhhhCCC---------------CCceEEEEccCCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG-NIGAVKVLQELFPE---------------PGRLQFIYADLGD  133 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~---------------~~~~~~~~~Dl~d  133 (296)
                      +.++|||||++|||+++|++|+++|++|++.+++... .+++.+.+....+.               ........+|+++
T Consensus         2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~   81 (284)
T d1e7wa_           2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL   81 (284)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence            4689999999999999999999999999998865432 23333344333221               1123345677999


Q ss_pred             HHHHHHHhhc-----CCCcEEEEcccccCcCCCCcChH------------------HHHHHHHHHHHHHHHHHHH-----
Q 022471          134 AKAVNKFFSE-----NAFDAVMHFAAVAYVGESTLDPL------------------KYYHNITSNTLVVLESMAR-----  185 (296)
Q Consensus       134 ~~~v~~~~~~-----~~~D~vi~~Ag~~~~~~~~~~~~------------------~~~~~n~~~t~~ll~~~~~-----  185 (296)
                      .+++++++++     +++|+||||||.....+..+...                  ..+.+|+.+...+.+.+.+     
T Consensus        82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            9999888765     89999999999865544322221                  2456777777666655432     


Q ss_pred             -----cCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCee
Q 022471          186 -----HGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNV  250 (296)
Q Consensus       186 -----~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v  250 (296)
                           .+.++||+++|....           .+.....+|+.||++.+.+++.++.|   +||++++|.||.+
T Consensus       162 ~~~~~~~~~~ii~~~s~~~~-----------~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t  223 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDAMTN-----------QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLS  223 (284)
T ss_dssp             CGGGSCSCEEEEEECCTTTT-----------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB
T ss_pred             HHHhcCCCCccccccccccc-----------CCccceeeeccccccchhhhHHHHHHhCCccccccccccccc
Confidence                 234578888886653           34455789999999999999999988   7999999999974

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=5.1e-22  Score=169.85  Aligned_cols=171  Identities=13%  Similarity=0.058  Sum_probs=126.4

Q ss_pred             ccEEEEEcCCC--hhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----
Q 022471           70 VTHVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (296)
Q Consensus        70 ~k~vlVTGasG--~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (296)
                      +|+||||||+|  |||+++|+.|+++|++|++.+|++...+...+....    .........|+++..++.+.+++    
T Consensus         5 gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (258)
T d1qsga_           5 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQ----LGSDIVLQCDVAEDASIDTMFAELGKV   80 (258)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHH----TTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhh----cCCcceeecccchHHHHHHHHHHhhhc
Confidence            49999999999  899999999999999999999875433333322222    35667889999999888777755    


Q ss_pred             -CCCcEEEEcccccCcCCCC-----cC----hHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcccccccCCCCCCCCCC
Q 022471          144 -NAFDAVMHFAAVAYVGEST-----LD----PLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEE  211 (296)
Q Consensus       144 -~~~D~vi~~Ag~~~~~~~~-----~~----~~~~~~~n~~~t~~ll~~~~~~--~~~riV~~SS~~~~g~~~~~~~~e~  211 (296)
                       +++|++||||+........     ..    ....++.|+.+...+...+...  ..+.||++||....           
T Consensus        81 ~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~-----------  149 (258)
T d1qsga_          81 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE-----------  149 (258)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT-----------
T ss_pred             ccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhc-----------
Confidence             7899999999875443311     11    1223445555555566555442  23468888887653           


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       212 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      .+.+....|+.||++.+.+++.++.|   +||++++|+||.|..+..
T Consensus       150 ~~~~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~  196 (258)
T d1qsga_         150 RAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAA  196 (258)
T ss_dssp             SBCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTG
T ss_pred             cCCCCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccc
Confidence            33445788999999999999999998   789999999999988763

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=8.6e-22  Score=171.13  Aligned_cols=191  Identities=23%  Similarity=0.312  Sum_probs=137.8

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----CCCc
Q 022471           73 VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NAFD  147 (296)
Q Consensus        73 vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~~D  147 (296)
                      |||||||||||++|+++|+++|+ +|+++++..+.. +.... .+         ...+|..+.+++......    ..++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~-~~~~~-~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT-KFVNL-VD---------LNIADYMDKEDFLIQIMAGEEFGDVE   70 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGG-GGHHH-HT---------SCCSEEEEHHHHHHHHHTTCCCSSCC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcc-hhhcc-cc---------cchhhhccchHHHHHHhhhhcccchh
Confidence            89999999999999999999996 788887543321 11111 11         012333333333222211    5689


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHH
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~  227 (296)
                      +++|.|+.....  ..........|+.++..+++++++.+.+ +|+.||..+++........++.+..|.+.|+.+|.++
T Consensus        71 ~i~~~aa~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~  147 (307)
T d1eq2a_          71 AIFHEGACSSTT--EWDGKYMMDNNYQYSKELLHYCLEREIP-FLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLF  147 (307)
T ss_dssp             EEEECCSCCCTT--CCCHHHHHHHTHHHHHHHHHHHHHHTCC-EEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHH
T ss_pred             hhhhhccccccc--cccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccchh
Confidence            999999865443  3356667888999999999999999875 6666666676666555666667778899999999999


Q ss_pred             HHHHHHhhhcCCCcEEEEecCeeecCCCCCCCCCCCCcccccccccHHHHHHHHhCCCC
Q 022471          228 EDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIA  286 (296)
Q Consensus       228 e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  286 (296)
                      |.+++.++.+++++++++||++||||+....         ...+.+++.+++.+..+++
T Consensus       148 e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~---------~~~~~~~~~~~~~~~~~~~  197 (307)
T d1eq2a_         148 DEYVRQILPEANSQIVGFRYFNVYGPREGHK---------GSMASVAFHLNTQLNNGES  197 (307)
T ss_dssp             HHHHHHHGGGCSSCEEEEEECEEESSSCGGG---------GGGSCHHHHHHHHHHC---
T ss_pred             hhhccccccccccccccccceeEeecccccc---------ccccccccccccccccccc
Confidence            9999999999999999999999999975321         1123778888888888766

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.86  E-value=1.3e-21  Score=165.35  Aligned_cols=158  Identities=21%  Similarity=0.207  Sum_probs=121.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----CCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NAF  146 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~~  146 (296)
                      |++|||||++|||+++|++|+++|++|++++|+...               .+....++|+++......+...    ...
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~---------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   66 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREG---------------EDLIYVEGDVTREEDVRRAVARAQEEAPL   66 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS---------------SSSEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc---------------ccceEeeccccchhhhHHHHHhhhccccc
Confidence            899999999999999999999999999999986432               3456788999998777666543    566


Q ss_pred             cEEEEcccccCcC----C----CCcChHHHHHHHHHHHHHHHHHHH----------HcCCCEEEEEcccccccCCCCCCC
Q 022471          147 DAVMHFAAVAYVG----E----STLDPLKYYHNITSNTLVVLESMA----------RHGVDTLIYSSTCATYGEPEKMPI  208 (296)
Q Consensus       147 D~vi~~Ag~~~~~----~----~~~~~~~~~~~n~~~t~~ll~~~~----------~~~~~riV~~SS~~~~g~~~~~~~  208 (296)
                      |.++++++.....    .    ..+...+.+++|+.+...+...+.          +.+.++||++||...+        
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~--------  138 (241)
T d1uaya_          67 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAF--------  138 (241)
T ss_dssp             EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHH--------
T ss_pred             cchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhc--------
Confidence            7777777653221    1    223344567888888655444432          2345799999998775        


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          209 TEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       209 ~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                         .+.+...+|+.||++.+.+++.++.|   +||++++|.||.|..+.
T Consensus       139 ---~~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~  184 (241)
T d1uaya_         139 ---EGQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPL  184 (241)
T ss_dssp             ---HCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHH
T ss_pred             ---cCCCCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccc
Confidence               23445789999999999999999988   79999999999997753

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.86  E-value=5.4e-21  Score=164.81  Aligned_cols=171  Identities=12%  Similarity=0.039  Sum_probs=120.4

Q ss_pred             ccEEEEEcCCC--hhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----
Q 022471           70 VTHVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (296)
Q Consensus        70 ~k~vlVTGasG--~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (296)
                      +|++|||||+|  |||+++|++|+++|++|++++|++.. .+..+++.+.   .....+..+|+++.+++++++++    
T Consensus         5 gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~-~~~~~~l~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (274)
T d2pd4a1           5 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESL-EKRVRPIAQE---LNSPYVYELDVSKEEHFKSLYNSVKKD   80 (274)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTT-HHHHHHHHHH---TTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHhh---CCceeEeeecccchhhHHHHHHHHHHH
Confidence            49999999876  89999999999999999999987432 2233333332   35667889999999998888765    


Q ss_pred             -CCCcEEEEcccccCcCC----CCcChHHHHHHHHHH----HHHHHHHHHHc-CCC-EEEEEcccccccCCCCCCCCCCC
Q 022471          144 -NAFDAVMHFAAVAYVGE----STLDPLKYYHNITSN----TLVVLESMARH-GVD-TLIYSSTCATYGEPEKMPITEET  212 (296)
Q Consensus       144 -~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~n~~~----t~~ll~~~~~~-~~~-riV~~SS~~~~g~~~~~~~~e~~  212 (296)
                       +++|++|||||......    ..+.....+..+...    .......+.+. +.+ .++++|+.+..           .
T Consensus        81 ~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~-----------~  149 (274)
T d2pd4a1          81 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGST-----------K  149 (274)
T ss_dssp             TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT-----------S
T ss_pred             cCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccc-----------c
Confidence             78999999999754422    212222333333332    33333333332 223 45556665544           2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCCC
Q 022471          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       213 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~~  255 (296)
                      +......|+.+|.+.+.+++.++.|   +||++++|.||.+..+..
T Consensus       150 ~~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~  195 (274)
T d2pd4a1         150 YMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLAS  195 (274)
T ss_dssp             BCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTG
T ss_pred             ccccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccc
Confidence            3344678999999999999999988   899999999999988753

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.85  E-value=4.9e-21  Score=158.80  Aligned_cols=152  Identities=16%  Similarity=0.152  Sum_probs=116.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      |+||||||||+||++++++|+++|+  +|++..|++...             ..++   ..+..|..++.+.+. ..+|.
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~-------------~~~~---~~~~~d~~~~~~~~~-~~~d~   65 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE-------------HPRL---DNPVGPLAELLPQLD-GSIDT   65 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC-------------CTTE---ECCBSCHHHHGGGCC-SCCSE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh-------------cccc---cccccchhhhhhccc-cchhe
Confidence            8999999999999999999999998  566655533211             1222   445556555544432 46899


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e  228 (296)
                      |||++|.....  ......+.+.|+.++.++++++++.+.+++|++||..+++             .+.+.|..+|..+|
T Consensus        66 vi~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~-------------~~~~~y~~~K~~~E  130 (212)
T d2a35a1          66 AFCCLGTTIKE--AGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA-------------KSSIFYNRVKGELE  130 (212)
T ss_dssp             EEECCCCCHHH--HSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT-------------TCSSHHHHHHHHHH
T ss_pred             eeeeeeeeccc--cccccccccchhhhhhhccccccccccccccccccccccc-------------ccccchhHHHHHHh
Confidence            99999864322  2345678889999999999999999999999999987762             23578999999999


Q ss_pred             HHHHHhhhcCCC-cEEEEecCeeecCCCCCC
Q 022471          229 DIILDFSKNSDM-AVMILRYFNVIGSDPEGR  258 (296)
Q Consensus       229 ~~~~~~~~~~gi-~~~~lrpg~v~Gp~~~~~  258 (296)
                      ..+++    .+. +++++||+.||||.+..+
T Consensus       131 ~~l~~----~~~~~~~I~Rp~~v~G~~~~~~  157 (212)
T d2a35a1         131 QALQE----QGWPQLTIARPSLLFGPREEFR  157 (212)
T ss_dssp             HHHTT----SCCSEEEEEECCSEESTTSCEE
T ss_pred             hhccc----cccccceeeCCcceeCCccccc
Confidence            87754    455 599999999999986543

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.85  E-value=1.9e-20  Score=160.41  Aligned_cols=171  Identities=18%  Similarity=0.166  Sum_probs=117.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc-chhhhhhhhhCCCCCceEEEEccCCC----HHHHHHHhhc--
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN-IGAVKVLQELFPEPGRLQFIYADLGD----AKAVNKFFSE--  143 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d----~~~v~~~~~~--  143 (296)
                      .++|||||++|||+++|++|+++|++|++++|+.++. +++.+++.+..  +.......+|+.+    .+.++++++.  
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR--AGSAVLCKGDLSLSSSLLDCCEDIIDCSF   79 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS--TTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhc--CCceEEEecccccchhHHHHHHHHHHHHH
Confidence            4799999999999999999999999999999865432 33344444443  2456666666654    3445444432  


Q ss_pred             ---CCCcEEEEcccccCcCCCCcC---------------hHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEcc
Q 022471          144 ---NAFDAVMHFAAVAYVGESTLD---------------PLKYYHNITSNTLVVLESMARH---------GVDTLIYSST  196 (296)
Q Consensus       144 ---~~~D~vi~~Ag~~~~~~~~~~---------------~~~~~~~n~~~t~~ll~~~~~~---------~~~riV~~SS  196 (296)
                         +++|++|||||+.......+.               ....+..|..+...........         ....++.+|+
T Consensus        80 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (266)
T d1mxha_          80 RAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD  159 (266)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECC
T ss_pred             HHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhh
Confidence               789999999998654332111               1123344444433333333221         2345667777


Q ss_pred             cccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          197 CATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       197 ~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                      ....           .+.+...+|+.||++.+.+++.++.+   +||+++.|.||.+..+.
T Consensus       160 ~~~~-----------~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~  209 (266)
T d1mxha_         160 AMTD-----------LPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPP  209 (266)
T ss_dssp             GGGG-----------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCS
T ss_pred             cccc-----------ccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccc
Confidence            6554           34455789999999999999999988   78999999999988764

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.82  E-value=6.1e-20  Score=153.61  Aligned_cols=166  Identities=16%  Similarity=0.155  Sum_probs=122.2

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEE--EEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVT--IVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~--~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (296)
                      .|++||||||||+||++++++|+++|++|.  .+.|++.+   .    ...   ..+++++.+|+++.+++.+++  .++
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~---~----~~~---~~~~~~~~~d~~~~~~~~~~~--~~~   69 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQG---K----EKI---GGEADVFIGDITDADSINPAF--QGI   69 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHH---H----HHT---TCCTTEEECCTTSHHHHHHHH--TTC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHH---H----Hhc---cCCcEEEEeeecccccccccc--ccc
Confidence            368999999999999999999999998644  44553321   1    111   256889999999999999999  679


Q ss_pred             cEEEEcccccCcCC-------------CCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCC
Q 022471          147 DAVMHFAAVAYVGE-------------STLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (296)
Q Consensus       147 D~vi~~Ag~~~~~~-------------~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~  213 (296)
                      |.|||+|+......             ..........+|+.++.+++..+.....+...+.|+...+.....      ..
T Consensus        70 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~------~~  143 (252)
T d2q46a1          70 DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHP------LN  143 (252)
T ss_dssp             SEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCG------GG
T ss_pred             eeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcc------cc
Confidence            99999998643221             122344567889999999999999988899999988665522111      11


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEecCeeecCCCC
Q 022471          214 QAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPE  256 (296)
Q Consensus       214 ~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrpg~v~Gp~~~  256 (296)
                      ......|...|.+.+.+.    .+.|++++++||+++|||...
T Consensus       144 ~~~~~~~~~~~~~~~~~~----~~~~~~~~ilRp~~v~g~~~~  182 (252)
T d2q46a1         144 KLGNGNILVWKRKAEQYL----ADSGTPYTIIRAGGLLDKEGG  182 (252)
T ss_dssp             GGGGCCHHHHHHHHHHHH----HHSSSCEEEEEECEEECSCTT
T ss_pred             cccccchhhhhhhhhhhh----hcccccceeecceEEECCCcc
Confidence            122455666666665544    348999999999999999854

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.82  E-value=7.8e-20  Score=156.82  Aligned_cols=168  Identities=11%  Similarity=0.040  Sum_probs=115.3

Q ss_pred             ccEEEEEcC--CChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc----
Q 022471           70 VTHVLVTGG--AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (296)
Q Consensus        70 ~k~vlVTGa--sG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (296)
                      +|++|||||  +.|||+++|++|+++|++|++++|+..   +..+.+.+..  +.+...+++|+++.+++..+++.    
T Consensus         6 gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~---~~~~~~~~~~--~~~~~~~~~dv~~~~~~~~~~~~v~~~   80 (268)
T d2h7ma1           6 GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRL---RLIQRITDRL--PAKAPLLELDVQNEEHLASLAGRVTEA   80 (268)
T ss_dssp             TCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCH---HHHHHHHTTS--SSCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChH---HHHHHHHHHc--CCceeeEeeecccccccccccchhhhc
Confidence            399999995  568999999999999999999987543   3333333332  35677889999999877666543    


Q ss_pred             ----CCCcEEEEcccccCcCC-----CCcChHH----HHHHHHHHHHHHHHHHHHcC-CCEEEEEcccccccCCCCCCCC
Q 022471          144 ----NAFDAVMHFAAVAYVGE-----STLDPLK----YYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEPEKMPIT  209 (296)
Q Consensus       144 ----~~~D~vi~~Ag~~~~~~-----~~~~~~~----~~~~n~~~t~~ll~~~~~~~-~~riV~~SS~~~~g~~~~~~~~  209 (296)
                          +.+|+++||||......     ..+....    .+..|............... ...+++++|....         
T Consensus        81 ~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~---------  151 (268)
T d2h7ma1          81 IGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS---------  151 (268)
T ss_dssp             HCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS---------
T ss_pred             cccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccccccccccccccc---------
Confidence                56999999999753221     1222222    33444444444444443322 2234444443332         


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecC
Q 022471          210 EETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGS  253 (296)
Q Consensus       210 e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp  253 (296)
                        .+.+....|+.+|.+.+.+++.++.+   +||++++|.||.|..+
T Consensus       152 --~~~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~  196 (268)
T d2h7ma1         152 --RAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTL  196 (268)
T ss_dssp             --SCCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCH
T ss_pred             --ccCcccchhhccccchhhccccchhhhhccCCcceEEecCCCCCh
Confidence              23344678999999999999999988   7899999999998764

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.80  E-value=1.9e-19  Score=159.14  Aligned_cols=172  Identities=11%  Similarity=-0.006  Sum_probs=114.9

Q ss_pred             ccEEEEEc--CCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhC------C---CCCceEEEEc---------
Q 022471           70 VTHVLVTG--GAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELF------P---EPGRLQFIYA---------  129 (296)
Q Consensus        70 ~k~vlVTG--asG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~---~~~~~~~~~~---------  129 (296)
                      .|++||||  +++|||+++|++|+++|++|++.++.............+..      .   .........+         
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            38999999  56799999999999999999998865432211111000000      0   0011223333         


Q ss_pred             -----------cCCCHHHHHHHhhc-----CCCcEEEEcccccCc--CC----CCcChHHHHHHHHHHHHHHHHHHHHc-
Q 022471          130 -----------DLGDAKAVNKFFSE-----NAFDAVMHFAAVAYV--GE----STLDPLKYYHNITSNTLVVLESMARH-  186 (296)
Q Consensus       130 -----------Dl~d~~~v~~~~~~-----~~~D~vi~~Ag~~~~--~~----~~~~~~~~~~~n~~~t~~ll~~~~~~-  186 (296)
                                 |+++.++++++++.     +++|++|||||....  .+    ..+++...+++|+.+...+.+++.+. 
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m  161 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence                       45555555554433     899999999996432  12    33445557778888866666655443 


Q ss_pred             -CCCEEEEEcccccccCCCCCCCCCCCCCC-CCChHHHHHHHHHHHHHHhhhc----CCCcEEEEecCeeec
Q 022471          187 -GVDTLIYSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSKN----SDMAVMILRYFNVIG  252 (296)
Q Consensus       187 -~~~riV~~SS~~~~g~~~~~~~~e~~~~~-~~~~Y~~sK~~~e~~~~~~~~~----~gi~~~~lrpg~v~G  252 (296)
                       ..++||++||.+..           .+.+ ....|+.||.+.+.+++.++.|    +||+|++|.||.|-.
T Consensus       162 ~~~GsIv~iss~~~~-----------~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T  222 (329)
T d1uh5a_         162 KPQSSIISLTYHASQ-----------KVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS  222 (329)
T ss_dssp             EEEEEEEEEECGGGT-----------SCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
T ss_pred             ccccccccceeehhc-----------ccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccc
Confidence             23689999987654           1222 2567999999999999999977    489999999999876

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.80  E-value=4.5e-19  Score=154.26  Aligned_cols=179  Identities=13%  Similarity=0.015  Sum_probs=112.9

Q ss_pred             CCCCccEEEEEcCCC--hhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhh------hhCCCCC--ce-EEEEcc--C-
Q 022471           66 HEEGVTHVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQ------ELFPEPG--RL-QFIYAD--L-  131 (296)
Q Consensus        66 ~~~~~k~vlVTGasG--~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~--~~-~~~~~D--l-  131 (296)
                      .+.+ |++|||||+|  |||+++|++|+++|++|++.+|++.......+...      .......  .. ....+|  + 
T Consensus         5 ~L~g-K~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T d1d7oa_           5 DLRG-KRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCTT-CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             CCCC-CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence            3444 9999999886  99999999999999999999875321111110000      0000000  11 122222  1 


Q ss_pred             -----------------CCHHHHHHHhhc-----CCCcEEEEcccccCc--CC----CCcChHHHHHHHHHHHHHHHHHH
Q 022471          132 -----------------GDAKAVNKFFSE-----NAFDAVMHFAAVAYV--GE----STLDPLKYYHNITSNTLVVLESM  183 (296)
Q Consensus       132 -----------------~d~~~v~~~~~~-----~~~D~vi~~Ag~~~~--~~----~~~~~~~~~~~n~~~t~~ll~~~  183 (296)
                                       ++..++++++++     +++|+||||||....  .+    ..+++...+++|+.+...+..++
T Consensus        84 ~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~  163 (297)
T d1d7oa_          84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHH
Confidence                             222222333322     799999999997431  22    33345567888999988877777


Q ss_pred             HHcC--CCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc----CCCcEEEEecCeeecCCC
Q 022471          184 ARHG--VDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN----SDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       184 ~~~~--~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~gi~~~~lrpg~v~Gp~~  255 (296)
                      ....  .++++.+++.+...          ........|+.+|.+.+.+++.++.+    +||++++|.||.+..+..
T Consensus       164 ~~~~~~~g~~~~~~~~~~~~----------~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~  231 (297)
T d1d7oa_         164 LPIMNPGGASISLTYIASER----------IIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAA  231 (297)
T ss_dssp             GGGEEEEEEEEEEECGGGTS----------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCS
T ss_pred             HHHhhcCCcceeeeehhhcc----------cccccccceecccccccccccccchhccccceEEecccccccccchhh
Confidence            6442  23555655544321          12234668999999999999887765    589999999999988764

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.79  E-value=3.4e-18  Score=145.50  Aligned_cols=162  Identities=13%  Similarity=0.070  Sum_probs=108.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc------
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------  143 (296)
                      ||+||||||++|||+++|++|+++|++|++++|+..+                    ...|+.+.+..+....+      
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~--------------------~~~d~~~~~~~~~~~~~~~~~~~   60 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE--------------------VIADLSTAEGRKQAIADVLAKCS   60 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS--------------------EECCTTSHHHHHHHHHHHHTTCT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH--------------------HHHHhcCHHHHHHHHHHHHHHhC
Confidence            7999999999999999999999999999999975321                    14677777665544322      


Q ss_pred             CCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHH----HHHHHHcCCCEEEEEcccccccC-CCCCCCC---------
Q 022471          144 NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGE-PEKMPIT---------  209 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~l----l~~~~~~~~~riV~~SS~~~~g~-~~~~~~~---------  209 (296)
                      +.+|+++||||+...   .+.......+|..+...+    .+.+.+........+++...... ....+..         
T Consensus        61 ~~id~lv~~Ag~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  137 (257)
T d1fjha_          61 KGMDGLVLCAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEA  137 (257)
T ss_dssp             TCCSEEEECCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred             CCCcEEEEcCCCCCc---HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEE
Confidence            569999999997543   334555667777775544    44444555556666665432211 0000000         


Q ss_pred             -------CCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecCeeecCC
Q 022471          210 -------EETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRYFNVIGSD  254 (296)
Q Consensus       210 -------e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrpg~v~Gp~  254 (296)
                             ......+..+|+.||++.+.+++.++.|   +||++++|.||.|-.|.
T Consensus       138 ~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~  192 (257)
T d1fjha_         138 KARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPL  192 (257)
T ss_dssp             HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----
T ss_pred             EEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChh
Confidence                   0001112346999999999999999988   89999999999998765

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.77  E-value=1.5e-18  Score=150.69  Aligned_cols=160  Identities=16%  Similarity=0.103  Sum_probs=120.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchh-hhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGA-VKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +|||||||||+||++++++|+++|++|+++.|+....... .+.+....  ..+++++++|++|.+.+.+++  .+.+.+
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~--~~~v~~v~~d~~d~~~~~~~~--~~~~~~   79 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDAL--KQVDVV   79 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHHH--TTCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhc--cCCcEEEEeecccchhhhhhc--cCcchh
Confidence            6799999999999999999999999999999865443321 22222221  256899999999999999998  678999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~  229 (296)
                      +++++.....           .|..++.+++.++.+.+..++++.||.+++...      +..+..+...|..+|..++.
T Consensus        80 ~~~~~~~~~~-----------~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~------~~~~~~~~~~~~~~~~~~~~  142 (312)
T d1qyda_          80 ISALAGGVLS-----------HHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDI------MEHALQPGSITFIDKRKVRR  142 (312)
T ss_dssp             EECCCCSSSS-----------TTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTS------CCCCCSSTTHHHHHHHHHHH
T ss_pred             hhhhhhcccc-----------cchhhhhHHHHHHHHhcCCcEEEEeeccccCCC------cccccchhhhhhHHHHHHHH
Confidence            9998754322           344456678888888877788888886655322      23445567788888888776


Q ss_pred             HHHHhhhcCCCcEEEEecCeeecCCC
Q 022471          230 IILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       230 ~~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                      +.+.    .+++++++||+.+||+..
T Consensus       143 ~~~~----~~~~~~i~r~~~~~g~~~  164 (312)
T d1qyda_         143 AIEA----ASIPYTYVSSNMFAGYFA  164 (312)
T ss_dssp             HHHH----TTCCBCEEECCEEHHHHT
T ss_pred             hhcc----cccceEEeccceeecCCc
Confidence            6544    789999999999999753

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.72  E-value=1e-17  Score=144.45  Aligned_cols=155  Identities=13%  Similarity=0.157  Sum_probs=112.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhh--hhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAV--KVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      ||||||||||+||++++++|+++|++|++++|+........  ..+....  ...+.++.+|+.+...+.+.+  .+.|.
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~--~~~~~   79 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAV--KNVDV   79 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHH--HTCSE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhc--cCCcEEEEeecccchhhhhhh--hhcee
Confidence            78999999999999999999999999999998765543322  2222222  246888999999999999888  46899


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e  228 (296)
                      +||+++...               ..++..++++++..+.+++++.||.....       ++.....+...|...+...+
T Consensus        80 vi~~~~~~~---------------~~~~~~~~~a~~~~~~~~~~~~s~~~~~~-------~~~~~~~~~~~~~~~~~~~~  137 (307)
T d1qyca_          80 VISTVGSLQ---------------IESQVNIIKAIKEVGTVKRFFPSEFGNDV-------DNVHAVEPAKSVFEVKAKVR  137 (307)
T ss_dssp             EEECCCGGG---------------SGGGHHHHHHHHHHCCCSEEECSCCSSCT-------TSCCCCTTHHHHHHHHHHHH
T ss_pred             eeecccccc---------------cchhhHHHHHHHHhccccceeeecccccc-------cccccccccccccccccccc
Confidence            999987432               23455677888888888888888854431       11122223344555555555


Q ss_pred             HHHHHhhhcCCCcEEEEecCeeecCCC
Q 022471          229 DIILDFSKNSDMAVMILRYFNVIGSDP  255 (296)
Q Consensus       229 ~~~~~~~~~~gi~~~~lrpg~v~Gp~~  255 (296)
                      .+.+.    .+++++++||+++||+..
T Consensus       138 ~~~~~----~~~~~~i~r~~~v~g~~~  160 (307)
T d1qyca_         138 RAIEA----EGIPYTYVSSNCFAGYFL  160 (307)
T ss_dssp             HHHHH----HTCCBEEEECCEEHHHHT
T ss_pred             chhhc----cCCCceecccceecCCCc
Confidence            55443    789999999999999864

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.63  E-value=3.5e-15  Score=132.11  Aligned_cols=151  Identities=12%  Similarity=0.023  Sum_probs=112.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHH-HHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKA-VNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-v~~~~~~~~~D~v  149 (296)
                      |+|+||||||+||++++++|+++|++|+++.|+..+..  .+.+..    ..+++.+++|+.|..+ ++.++  .++|.+
T Consensus         4 ktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~--~~~~~~----~~~v~~~~gD~~d~~~~~~~a~--~~~~~~   75 (350)
T d1xgka_           4 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA----IPNVTLFQGPLLNNVPLMDTLF--EGAHLA   75 (350)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT----STTEEEEESCCTTCHHHHHHHH--TTCSEE
T ss_pred             CEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhh--hhhhcc----cCCCEEEEeeCCCcHHHHHHHh--cCCceE
Confidence            89999999999999999999999999999998765432  112211    2578999999999654 56666  678988


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~  229 (296)
                      +++.....            ..++..+.++++++++.+.+++|+.||......         ....+..+|..+|...+.
T Consensus        76 ~~~~~~~~------------~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~---------~~~~~~~~~~~~k~~~~~  134 (350)
T d1xgka_          76 FINTTSQA------------GDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSL---------YGPWPAVPMWAPKFTVEN  134 (350)
T ss_dssp             EECCCSTT------------SCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGG---------TSSCCCCTTTHHHHHHHH
T ss_pred             Eeeccccc------------chhhhhhhHHHHHHHHhCCCceEEEeecccccc---------CCcccchhhhhhHHHHHH
Confidence            87754211            135667788999999999888888888654321         122345677889988887


Q ss_pred             HHHHhhhcCCCcEEEEecCeeecCC
Q 022471          230 IILDFSKNSDMAVMILRYFNVIGSD  254 (296)
Q Consensus       230 ~~~~~~~~~gi~~~~lrpg~v~Gp~  254 (296)
                      +..+    .+++++++||+..++..
T Consensus       135 ~~~~----~~~~~~~vr~~~~~~~~  155 (350)
T d1xgka_         135 YVRQ----LGLPSTFVYAGIYNNNF  155 (350)
T ss_dssp             HHHT----SSSCEEEEEECEEGGGC
T ss_pred             HHHh----hccCceeeeeceeeccc
Confidence            7655    67899999999987753

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.58  E-value=3.4e-16  Score=127.35  Aligned_cols=82  Identities=15%  Similarity=0.152  Sum_probs=69.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +|+|+||||+||||+++++.|+++|++|++++|+..+.++..+.+.+.    .++.+..+|++|.+++++++  +++|+|
T Consensus        23 gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~--~~iDil   96 (191)
T d1luaa1          23 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR----FKVNVTAAETADDASRAEAV--KGAHFV   96 (191)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH----HTCCCEEEECCSHHHHHHHT--TTCSEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhc----cchhhhhhhcccHHHHHHHh--cCcCee
Confidence            399999999999999999999999999999998876666555555443    34567889999999999999  689999


Q ss_pred             EEcccccC
Q 022471          150 MHFAAVAY  157 (296)
Q Consensus       150 i~~Ag~~~  157 (296)
                      |||||...
T Consensus        97 in~Ag~g~  104 (191)
T d1luaa1          97 FTAGAIGL  104 (191)
T ss_dssp             EECCCTTC
T ss_pred             eecCcccc
Confidence            99999754

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.46  E-value=4.6e-07  Score=68.96  Aligned_cols=115  Identities=15%  Similarity=0.167  Sum_probs=73.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      .|||.|.|+ |.+|..++..|+.+|  .+|+++|+++...+.....+...............|.   ++    +  .+.|
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~~----~--~~ad   74 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---SD----C--KDAD   74 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---GG----G--TTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---HH----h--cccc
Confidence            378999996 999999999999987  5899999765332222222222111112334444553   22    2  5789


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      +||.+||....+  ..+..+....|....+.+.+.+.+.+.+-++.+.|
T Consensus        75 ivvitag~~~~~--g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          75 LVVITAGAPQKP--GESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             EEEECCCC------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEEecccccCC--CCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence            999999975432  23455677889999999999999998766666655

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.39  E-value=3.4e-06  Score=63.86  Aligned_cols=116  Identities=12%  Similarity=0.115  Sum_probs=75.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCC--cchhhhhhhhh-CCCCCceEEEEccCCCHHHHHHHhhcCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRG--NIGAVKVLQEL-FPEPGRLQFIYADLGDAKAVNKFFSENA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~--~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~v~~~~~~~~  145 (296)
                      |||.|+||+|.+|..++..|+.+|.  +++++|+++.-  .+.....+... .......+....--.|.+    .+  .+
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~----~l--~~   74 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLR----II--DE   74 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGG----GG--TT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHH----Hh--cc
Confidence            5799999999999999999999984  89999875321  11112222221 112223332211111222    22  57


Q ss_pred             CcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEE
Q 022471          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYS  194 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~  194 (296)
                      .|+||-+||....+  ..+..+.++.|....+.+.+.+.+.+.+.++.+
T Consensus        75 aDvVVitAG~~~~~--g~sR~dl~~~Na~iv~~i~~~i~~~~~~~iivV  121 (145)
T d1hyea1          75 SDVVIITSGVPRKE--GMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVI  121 (145)
T ss_dssp             CSEEEECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred             ceEEEEecccccCC--CCChhhhhhhhHHHHHHHHHHHhccCCCeEEEE
Confidence            89999999975432  235677899999999999999999887666544

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.36  E-value=2.1e-06  Score=63.96  Aligned_cols=97  Identities=13%  Similarity=0.061  Sum_probs=67.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+|+|.|+ |.+|+.+++.|.+.|++|++++.++...+    .+.+.    ....++.+|.+|++.++++-- .+.|.++
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~----~~~~~----~~~~vi~Gd~~~~~~l~~~~i-~~a~~vv   70 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICK----KASAE----IDALVINGDCTKIKTLEDAGI-EDADMYI   70 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH----HHHHH----CSSEEEESCTTSHHHHHHTTT-TTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhh----hhhhh----hhhhhccCcccchhhhhhcCh-hhhhhhc
Confidence            68999997 99999999999999999999986543322    22221    246788999999999988732 4688888


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEE
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYS  194 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~  194 (296)
                      -+..         +    -+.|+..+.    .+++.+.+++|..
T Consensus        71 ~~t~---------~----d~~N~~~~~----~~k~~~~~~iI~~   97 (132)
T d1lssa_          71 AVTG---------K----EEVNLMSSL----LAKSYGINKTIAR   97 (132)
T ss_dssp             ECCS---------C----HHHHHHHHH----HHHHTTCCCEEEE
T ss_pred             ccCC---------c----HHHHHHHHH----HHHHcCCceEEEE
Confidence            6532         1    134554333    3455677776643

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.33  E-value=1.8e-06  Score=65.43  Aligned_cols=114  Identities=20%  Similarity=0.208  Sum_probs=76.1

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      ||.|+||+|.+|++++..|+.+|.  +++++|.+..  ..   ....+... ........-+ ...+..+.+  .+.|+|
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~--~~---~a~Dl~~~-~~~~~~~~~~-~~~~~~~~~--~~aDiv   72 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHT--PG---VAADLSHI-ETRATVKGYL-GPEQLPDCL--KGCDVV   72 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSH--HH---HHHHHTTS-SSSCEEEEEE-SGGGHHHHH--TTCSEE
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEecccc--ch---hhHHHhhh-hhhcCCCeEE-cCCChHHHh--CCCCEE
Confidence            799999999999999999999885  7888886431  11   11122111 1111111112 233444444  578999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      |..||....+  .++..+.++.|....+.+++.+++.+.+-+|.+.|
T Consensus        73 Vitag~~~~~--g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt  117 (144)
T d1mlda1          73 VIPAGVPRKP--GMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (144)
T ss_dssp             EECCSCCCCT--TCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EECCCcCCCC--CCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            9999975432  33566789999999999999999998665555554

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.28  E-value=2.2e-07  Score=73.51  Aligned_cols=47  Identities=19%  Similarity=0.270  Sum_probs=39.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhh
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQEL  117 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~  117 (296)
                      |||.|+||+|+||+++|+.|+++||+|++++|++.+.++..+++...
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~   47 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRI   47 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence            57889999999999999999999999999999876666666666544

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=98.22  E-value=1.1e-05  Score=60.76  Aligned_cols=114  Identities=15%  Similarity=0.197  Sum_probs=73.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +||.|.|+ |.+|+.++..|+.++.  +++++|+++...+.....+..............+|   .+    .+  .+.|+
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---~~----~~--~~adi   71 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD---YS----DV--KDCDV   71 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C---GG----GG--TTCSE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc---HH----Hh--CCCce
Confidence            57888897 9999999999999875  89999987765544433333322222233322222   22    22  57899


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      ||-.||....+  .++..+.++.|..-.+.+++.+.+.+.+-++.+-|
T Consensus        72 vvitag~~~~~--~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvt  117 (142)
T d1y6ja1          72 IVVTAGANRKP--GETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  117 (142)
T ss_dssp             EEECCCC--------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             EEEecccccCc--CcchhHHhhHHHHHHHHHHHHhhccCCCceEEEec
Confidence            99999975432  34566788999999999999999987655554444

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=7.9e-07  Score=69.62  Aligned_cols=74  Identities=18%  Similarity=0.269  Sum_probs=50.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHH---HHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK---AVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~v~~~~~~~~~D  147 (296)
                      .+|||+||+|++|...++.+...|++|+++++++.+    .+.++++.   .. +.  .|.++.+   .+.+.....++|
T Consensus        30 ~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~----~~~~~~~G---a~-~v--i~~~~~~~~~~i~~~t~~~g~d   99 (174)
T d1yb5a2          30 ESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEG----QKIVLQNG---AH-EV--FNHREVNYIDKIKKYVGEKGID   99 (174)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHH----HHHHHHTT---CS-EE--EETTSTTHHHHHHHHHCTTCEE
T ss_pred             CEEEEEeccccccccccccccccCcccccccccccc----cccccccC---cc-cc--cccccccHHHHhhhhhccCCce
Confidence            799999999999999999998899999998854322    23333331   11 22  3555543   333333336799


Q ss_pred             EEEEccc
Q 022471          148 AVMHFAA  154 (296)
Q Consensus       148 ~vi~~Ag  154 (296)
                      +++.+.|
T Consensus       100 ~v~d~~g  106 (174)
T d1yb5a2         100 IIIEMLA  106 (174)
T ss_dssp             EEEESCH
T ss_pred             EEeeccc
Confidence            9999886

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=98.15  E-value=1.3e-05  Score=60.37  Aligned_cols=114  Identities=15%  Similarity=0.144  Sum_probs=76.0

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCC--cchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRG--NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      ||.|+||+|.+|..++..|+.+|.  +++++|.....  .+.....+...............|.   ++    +  .+.|
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~----~--~~aD   72 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---ED----T--AGSD   72 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---GG----G--TTCS
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---HH----h--hhcC
Confidence            789999999999999999999985  78888853221  1111112222111123344444443   22    2  4789


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      +||-.||....+  .++-.+.++.|..-.+.+.+.+.+.+.+-++.+-|
T Consensus        73 iVvitaG~~~~~--g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          73 VVVITAGIPRQP--GQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             EEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             EEEEeccccccc--CCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEec
Confidence            999999975432  34667889999999999999999987655544444

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.11  E-value=1.4e-05  Score=60.00  Aligned_cols=114  Identities=18%  Similarity=0.173  Sum_probs=75.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      |||.|.|+ |.+|+.++..|+.++  .+++++|+++...+.....+...............|.   ++    +  .+.|+
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~---~~----~--~~adi   70 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY---AD----L--KGSDV   70 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG---GG----G--TTCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH---HH----h--cCCCE
Confidence            57888896 999999999999887  4899998765433322222222111112334333332   22    2  57899


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      ||-+||....+  .....+.+..|..-.+.+.+.+.+.+.+-++.+-|
T Consensus        71 vvitag~~~~~--g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          71 VIVAAGVPQKP--GETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             EEECCCCCCCS--SCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEEecccccCC--CcchhhhhccccchHHHHHHHHHhcCCCcEEEEeC
Confidence            99999975432  23556788899999999999999988766666555

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.11  E-value=3.9e-06  Score=65.25  Aligned_cols=73  Identities=18%  Similarity=0.167  Sum_probs=54.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+|+|.|| |.+|+.+|+.|+++|++|++++|+..+..+..+.       .........+..+.......+  ...|.++
T Consensus         3 K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~-------~~~~~~~~~~~~~~~~~~~~i--~~~~~~i   72 (182)
T d1e5qa1           3 KSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG-------VQHSTPISLDVNDDAALDAEV--AKHDLVI   72 (182)
T ss_dssp             CEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTT-------CTTEEEEECCTTCHHHHHHHH--TTSSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhc-------ccccccccccccchhhhHhhh--hccceeE
Confidence            89999987 9999999999999999999999866443332221       234555567777777777777  4578877


Q ss_pred             Ecc
Q 022471          151 HFA  153 (296)
Q Consensus       151 ~~A  153 (296)
                      .+.
T Consensus        73 ~~~   75 (182)
T d1e5qa1          73 SLI   75 (182)
T ss_dssp             ECS
T ss_pred             eec
Confidence            654

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.10  E-value=3.5e-05  Score=58.08  Aligned_cols=115  Identities=20%  Similarity=0.196  Sum_probs=73.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhC---CCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKD---SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      |||.|+|++|.+|++++..|+.+   +.+++++|..+ ..+.....+... ........ ..+-.+.++    +  .+.|
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~-~~~~~~~~-~~~~~~~~~----~--~~aD   71 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHI-PTAVKIKG-FSGEDATPA----L--EGAD   71 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTS-CSSCEEEE-ECSSCCHHH----H--TTCS
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCC-ccccCCcE-EEcCCCccc----c--CCCC
Confidence            58999999999999999888643   46899998642 222111122221 11112222 222223332    3  4689


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      +||-+||....+  ..+-.+.+..|....+.+.+.+.+.+.+.+|.+-|
T Consensus        72 vvvitaG~~~k~--g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvt  118 (145)
T d2cmda1          72 VVLISAGVRRKP--GMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (145)
T ss_dssp             EEEECCSCCCCT--TCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EEEECCCccCCC--CcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEcc
Confidence            999999975432  33556788999999999999999987655444444

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.10  E-value=1.5e-05  Score=60.46  Aligned_cols=116  Identities=18%  Similarity=0.230  Sum_probs=77.0

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCC-CCCceEEEEccCCCHHHHHHHhhcCC
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENA  145 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~  145 (296)
                      +.+||.|+|| |.+|+.++..|+.+|.  +++++|+++...+.....+..... ....+.....|.   +    .+  .+
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~---~----~l--~d   74 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY---D----DC--RD   74 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG---G----GT--TT
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH---H----Hh--cc
Confidence            3478999997 9999999999999875  799998755433332223332211 122334444443   2    22  57


Q ss_pred             CcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      .|+||.+||....+  .+...+.+..|....+.+.+.+.+.+.+-++.+-|
T Consensus        75 aDvvvitag~~~~~--~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt  123 (148)
T d1ldna1          75 ADLVVICAGANQKP--GETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (148)
T ss_dssp             CSEEEECCSCCCCT--TTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             ceeEEEeccccccc--CcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence            89999999975432  23445678889999999999999987654444434

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.09  E-value=3.4e-06  Score=66.34  Aligned_cols=106  Identities=17%  Similarity=0.199  Sum_probs=68.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +++|||+||+|++|...++-....|++|+++++++.+    .+.+++.   +....+..-|-...+.+.+.....++|++
T Consensus        30 G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~----~~~~~~~---Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v  102 (182)
T d1v3va2          30 GETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEK----IAYLKQI---GFDAAFNYKTVNSLEEALKKASPDGYDCY  102 (182)
T ss_dssp             SCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHH----HHHHHHT---TCSEEEETTSCSCHHHHHHHHCTTCEEEE
T ss_pred             CCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHH----HHHHHhh---hhhhhcccccccHHHHHHHHhhcCCCcee
Confidence            3899999999999999999999999999999864322    2333333   22222323344444555555555789999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccccC
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGE  202 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g~  202 (296)
                      +++.|..           .       ....++.++..  ++++.++....|+.
T Consensus       103 ~D~vG~~-----------~-------~~~~~~~l~~~--G~~v~~G~~~~~~~  135 (182)
T d1v3va2         103 FDNVGGE-----------F-------LNTVLSQMKDF--GKIAICGAISVYNR  135 (182)
T ss_dssp             EESSCHH-----------H-------HHHHGGGEEEE--EEEEECCCGGGTTC
T ss_pred             EEecCch-----------h-------hhhhhhhccCC--CeEEeecceeeccc
Confidence            9998721           1       12344444333  58888887766643

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=98.06  E-value=1.9e-05  Score=60.34  Aligned_cols=118  Identities=14%  Similarity=0.071  Sum_probs=76.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCC-CCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +||.|.|+ |.+|+.++..|+..+. +++++|.++...+.....+..... .+....... + .+   .++.+  .+.|+
T Consensus         8 ~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~-~-~~---~~~~~--~~adi   79 (154)
T d1pzga1           8 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-E-YS---YEAAL--TGADC   79 (154)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-E-CS---HHHHH--TTCSE
T ss_pred             CcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEec-c-Cc---hhhhh--cCCCe
Confidence            78999997 9999999998888884 899998765443333333222100 011111111 1 11   12333  57899


Q ss_pred             EEEcccccCcCC---CCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          149 VMHFAAVAYVGE---STLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       149 vi~~Ag~~~~~~---~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      ||-+||....+.   ...+-.+.+..|....+.+++.+.+.+.+-++.+.|
T Consensus        80 Vvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs  130 (154)
T d1pzga1          80 VIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  130 (154)
T ss_dssp             EEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            999999764432   122456678899999999999999998766666555

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.97  E-value=2.8e-05  Score=58.46  Aligned_cols=115  Identities=15%  Similarity=0.112  Sum_probs=74.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCcchhhhhhhhhC-CCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      |||.|+|| |.+|+.++..|+..|  .+++++|+++...+.....+.... ...........  .|.+    .+  .+.|
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~----~~--~dad   71 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYA----DT--ANSD   71 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGG----GG--TTCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHH----Hh--cCCe
Confidence            57888996 999999999999997  489999976654332222221110 00122222221  2222    23  5789


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      ++|-+||....+  ..+..+..+.|..-.+.+++.+.+.+.+-++.+-|
T Consensus        72 vvvitag~~~~~--g~~r~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1guza1          72 IVIITAGLPRKP--GMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (142)
T ss_dssp             EEEECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             EEEEEEecCCCC--CCchHHHHHHHHHHHHHHHHHhhccCCCeEEEEec
Confidence            999999975432  23456788899999999999999987665555544

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.96  E-value=1.7e-05  Score=62.22  Aligned_cols=82  Identities=12%  Similarity=0.104  Sum_probs=62.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      |+|+|.|+ ||.|++++..|++.|. +++++.|+..+.+++....++.... ........|+.+.+.+.+.+  ...|+|
T Consensus        19 k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~dii   94 (182)
T d1vi2a1          19 KTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNEN-TDCVVTVTDLADQQAFAEAL--ASADIL   94 (182)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHH-SSCEEEEEETTCHHHHHHHH--HTCSEE
T ss_pred             CEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhh-cCcceEeeecccccchhhhh--ccccee
Confidence            89999997 8999999999999997 7888888777666555544433221 23445578999998888877  468999


Q ss_pred             EEccccc
Q 022471          150 MHFAAVA  156 (296)
Q Consensus       150 i~~Ag~~  156 (296)
                      ||+....
T Consensus        95 IN~Tp~G  101 (182)
T d1vi2a1          95 TNGTKVG  101 (182)
T ss_dssp             EECSSTT
T ss_pred             ccccCCc
Confidence            9998653

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.90  E-value=2.8e-05  Score=57.63  Aligned_cols=73  Identities=15%  Similarity=0.100  Sum_probs=53.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+++|.|+ |-+|+++++.|.++|++|++++.++...    +.+..     .....+.+|.++++.++++-- .+.|.+|
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~----~~~~~-----~~~~~~~gd~~~~~~l~~a~i-~~a~~vi   69 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKV----NAYAS-----YATHAVIANATEENELLSLGI-RNFEYVI   69 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHH----HHTTT-----TCSEEEECCTTCTTHHHHHTG-GGCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHH----HHHHH-----hCCcceeeecccchhhhccCC-ccccEEE
Confidence            46788876 8999999999999999999998644322    22221     234567899999999888722 4678887


Q ss_pred             Eccc
Q 022471          151 HFAA  154 (296)
Q Consensus       151 ~~Ag  154 (296)
                      -..+
T Consensus        70 ~~~~   73 (134)
T d2hmva1          70 VAIG   73 (134)
T ss_dssp             ECCC
T ss_pred             EEcC
Confidence            6543

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.89  E-value=1.1e-05  Score=63.01  Aligned_cols=101  Identities=19%  Similarity=0.113  Sum_probs=60.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +.+|||+||+||+|...++-....|++|+..++++.+.+.+    +++   +.. +.+.-+-.+ ++..+.....++|+|
T Consensus        32 g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~----~~l---Ga~-~vi~~~~~~-~~~~~~~~~~gvD~v  102 (176)
T d1xa0a2          32 RGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL----RVL---GAK-EVLAREDVM-AERIRPLDKQRWAAA  102 (176)
T ss_dssp             GCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH----HHT---TCS-EEEECC----------CCSCCEEEE
T ss_pred             CCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHH----Hhc---ccc-eeeecchhH-HHHHHHhhccCcCEE
Confidence            37899999999999999998889999999998766554322    222   112 222111111 222233334689999


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccccc
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCAT  199 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~  199 (296)
                      |.+.|-..                  ....++.++.  .+|+|.++....
T Consensus       103 id~vgg~~------------------~~~~l~~l~~--~Griv~~G~~~g  132 (176)
T d1xa0a2         103 VDPVGGRT------------------LATVLSRMRY--GGAVAVSGLTGG  132 (176)
T ss_dssp             EECSTTTT------------------HHHHHHTEEE--EEEEEECSCCSS
T ss_pred             EEcCCchh------------------HHHHHHHhCC--CceEEEeecccC
Confidence            99987321                  1123344433  358998887543

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.88  E-value=0.00012  Score=55.87  Aligned_cols=114  Identities=18%  Similarity=0.130  Sum_probs=75.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhC-CCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      +||-|.|+ |.+|..++..|+.+|.  +++++|+++.........+.... ..+........|..   +    +  .+.|
T Consensus        21 ~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~---~----~--~~ad   90 (160)
T d1i0za1          21 NKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYS---V----T--ANSK   90 (160)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGG---G----G--TTCS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchh---h----c--cccc
Confidence            68999996 9999999999999986  89999875433322222222211 11122222223332   2    2  5789


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      +||..||....+  ..+..+.++.|....+.+.+.+++.+.+-++.+-|
T Consensus        91 iVVitAg~~~~~--g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvt  137 (160)
T d1i0za1          91 IVVVTAGVRQQE--GESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVS  137 (160)
T ss_dssp             EEEECCSCCCCT--TCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEEEecCCcccc--CcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            999999975432  23556788899999999999999988655544444

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.88  E-value=0.00012  Score=56.79  Aligned_cols=116  Identities=13%  Similarity=0.109  Sum_probs=70.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCC---C----eEEEEecCCCCcchhhhhhh-hhCCC-CCceEEEEccCCCHHHHHHHh
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDS---Y----RVTIVDNLSRGNIGAVKVLQ-ELFPE-PGRLQFIYADLGDAKAVNKFF  141 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G---~----~V~~~~r~~~~~~~~~~~~~-~~~~~-~~~~~~~~~Dl~d~~~v~~~~  141 (296)
                      .+|.||||+|.||++++..|+..+   .    .+.+++.  .......+.+. ++... ......+..- ++   ..+.+
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di--~~~~~~l~g~~mdl~d~a~~~~~~~~~~-~~---~~~~~   98 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGS--ERSFQALEGVAMELEDSLYPLLREVSIG-ID---PYEVF   98 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECC--GGGHHHHHHHHHHHHTTTCTTEEEEEEE-SC---HHHHT
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecC--ccccchhcchhhhhcccccccccCcccc-cc---chhhc
Confidence            589999999999999999998753   2    3444443  22222211111 11111 1122211111 12   23344


Q ss_pred             hcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCC--CEEEEEcc
Q 022471          142 SENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV--DTLIYSST  196 (296)
Q Consensus       142 ~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~--~riV~~SS  196 (296)
                        .+.|+||-.||....  ...+..+.++.|....+.+.+.+.+...  .+|+.+|-
T Consensus        99 --~~aDvVvi~ag~~rk--pg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~N  151 (175)
T d7mdha1          99 --EDVDWALLIGAKPRG--PGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGN  151 (175)
T ss_dssp             --TTCSEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             --cCCceEEEeeccCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEecC
Confidence              578999999987532  3456677899999999999999999743  24555543

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.81  E-value=5.4e-05  Score=57.08  Aligned_cols=116  Identities=14%  Similarity=0.109  Sum_probs=73.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCC-CCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      |||.|+|+ |.+|+.++..|+.+|.  +++++|+++...+.....+..... ..........|   .++    +  .+.|
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~~~----l--~~ad   71 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---WAA----L--ADAD   71 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---GGG----G--TTCS
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---HHH----h--cccc
Confidence            78999995 9999999999999874  899998755433322222322211 11223333333   222    2  5789


Q ss_pred             EEEEcccccCcCC--CCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          148 AVMHFAAVAYVGE--STLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       148 ~vi~~Ag~~~~~~--~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      +||-+||......  ...+-.+.++.|....+.+.+.+++.+.+-++.+-|
T Consensus        72 iVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  122 (146)
T d1hyha1          72 VVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (146)
T ss_dssp             EEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEec
Confidence            9999999754221  111234467789999999999999988665655555

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.81  E-value=0.00012  Score=54.86  Aligned_cols=115  Identities=14%  Similarity=0.068  Sum_probs=74.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      .||.|+|+ |.+|++++..|+.+|.  +++++|+++...+.....+...............  .+.+   . +  .+.|+
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~~---~-~--~daDv   72 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPE---I-C--RDADM   72 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGG---G-G--TTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC--CCHH---H-h--hCCcE
Confidence            46888896 9999999999999985  8999986543322222222221111112222221  1222   1 2  46899


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      ||-+||....+  ..+..+.+..|..-.+.+.+.+++.+.+-++.+-|
T Consensus        73 VVitaG~~~~~--g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivvt  118 (143)
T d1llda1          73 VVITAGPRQKP--GQSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT  118 (143)
T ss_dssp             EEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             EEEecccccCC--CCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            99999975432  34556788999999999999999988655555444

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.78  E-value=1.5e-05  Score=62.43  Aligned_cols=74  Identities=16%  Similarity=0.134  Sum_probs=50.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH---HHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~D  147 (296)
                      .+|||+||+|++|...++.+...|++|+++++++.+    .+.+++.   +.. +.  .|-.+.   +.+.+.....++|
T Consensus        27 ~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~----~~~l~~~---Ga~-~v--i~~~~~~~~~~v~~~t~~~g~d   96 (183)
T d1pqwa_          27 ERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAK----REMLSRL---GVE-YV--GDSRSVDFADEILELTDGYGVD   96 (183)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHH----HHHHHTT---CCS-EE--EETTCSTHHHHHHHHTTTCCEE
T ss_pred             CEEEEECCCCCcccccchhhccccccceeeeccccc----ccccccc---ccc-cc--ccCCccCHHHHHHHHhCCCCEE
Confidence            799999999999999999888899999998864322    2334433   222 22  233443   3444444335799


Q ss_pred             EEEEccc
Q 022471          148 AVMHFAA  154 (296)
Q Consensus       148 ~vi~~Ag  154 (296)
                      ++|.+.|
T Consensus        97 ~v~d~~g  103 (183)
T d1pqwa_          97 VVLNSLA  103 (183)
T ss_dssp             EEEECCC
T ss_pred             EEEeccc
Confidence            9999987

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.78  E-value=1.7e-05  Score=61.88  Aligned_cols=74  Identities=9%  Similarity=0.026  Sum_probs=51.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH---HHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~D  147 (296)
                      ++|+|+||+|++|..+++-....|++|+++++++.+.    +.++++.   .. +.  .|-++.   +.+.++-...++|
T Consensus        30 ~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~----~~~~~lG---a~-~v--i~~~~~d~~~~v~~~t~g~g~d   99 (179)
T d1qora2          30 EQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKA----QSALKAG---AW-QV--INYREEDLVERLKEITGGKKVR   99 (179)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHH----HHHHHHT---CS-EE--EETTTSCHHHHHHHHTTTCCEE
T ss_pred             CEEEEEccccccchHHHHHHHHhCCeEeecccchHHH----HHHHhcC---Ce-EE--EECCCCCHHHHHHHHhCCCCeE
Confidence            7999999999999999999988999999998754433    2333331   11 22  344443   3444443336799


Q ss_pred             EEEEccc
Q 022471          148 AVMHFAA  154 (296)
Q Consensus       148 ~vi~~Ag  154 (296)
                      +++.+.|
T Consensus       100 ~v~d~~g  106 (179)
T d1qora2         100 VVYDSVG  106 (179)
T ss_dssp             EEEECSC
T ss_pred             EEEeCcc
Confidence            9999987

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.75  E-value=0.0001  Score=55.31  Aligned_cols=114  Identities=16%  Similarity=0.161  Sum_probs=74.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhC-CCCCceEEE-EccCCCHHHHHHHhhcCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELF-PEPGRLQFI-YADLGDAKAVNKFFSENAF  146 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~-~~Dl~d~~~v~~~~~~~~~  146 (296)
                      |||.|.|+ |.+|..++..|+.+|.  +++++|+++...+.....+.... ..+...... ..|.   +    .+  .+.
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~---~----~~--~~a   70 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY---S----LL--KGS   70 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG---G----GG--TTC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH---H----Hh--ccc
Confidence            57888896 9999999999998874  79999865433322222222111 111112222 2232   2    22  578


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      |+||-.||....+  ..+..+....|....+.+.+.+++.+..-++.+-|
T Consensus        71 diVvitag~~~~~--g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          71 EIIVVTAGLARKP--GMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             SEEEECCCCCCCS--SCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             cEEEEeccccCCC--CCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence            9999999965432  33567788899999999999999987665666555

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.72  E-value=4.8e-05  Score=58.96  Aligned_cols=72  Identities=18%  Similarity=0.141  Sum_probs=48.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      ++|+|+||+|++|...++.+...|++|+++++++.+.+    .++++   +... .  .|..+  ..++.-...++|++|
T Consensus        29 ~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~----~~~~l---Ga~~-~--i~~~~--~~~~~~~~~g~D~v~   96 (171)
T d1iz0a2          29 EKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLA----LPLAL---GAEE-A--ATYAE--VPERAKAWGGLDLVL   96 (171)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSH----HHHHT---TCSE-E--EEGGG--HHHHHHHTTSEEEEE
T ss_pred             CEEEEEeccccchhhhhhhhcccccccccccccccccc----ccccc---ccce-e--eehhh--hhhhhhccccccccc
Confidence            79999999999999999988889999999886544332    22333   1111 1  23333  223333336799999


Q ss_pred             Eccc
Q 022471          151 HFAA  154 (296)
Q Consensus       151 ~~Ag  154 (296)
                      ++.|
T Consensus        97 d~~G  100 (171)
T d1iz0a2          97 EVRG  100 (171)
T ss_dssp             ECSC
T ss_pred             cccc
Confidence            9876

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.71  E-value=7.1e-05  Score=57.22  Aligned_cols=114  Identities=17%  Similarity=0.110  Sum_probs=74.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCcchhhhhhhhhCC-CCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      .||.|+|+ |.+|..++..|+.+|.  +++++|++..........+..... .+........|..   +    +  .+.|
T Consensus        20 ~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~---~----~--~~ad   89 (159)
T d2ldxa1          20 CKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYN---V----S--ANSK   89 (159)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGG---G----G--TTEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchh---h----h--cccc
Confidence            57999996 9999999999999975  799998654333322223332211 1122222233332   1    2  5789


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      +||..||....+.  .+..+.++.|....+.+.+.+.+.+.+-++.+-|
T Consensus        90 ivvitag~~~~~~--~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvt  136 (159)
T d2ldxa1          90 LVIITAGARMVSG--QTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVT  136 (159)
T ss_dssp             EEEECCSCCCCTT--TCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECS
T ss_pred             EEEEecccccCCC--CCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeC
Confidence            9999999755432  3444567889999999999999887655554444

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.67  E-value=0.00039  Score=52.67  Aligned_cols=116  Identities=16%  Similarity=0.097  Sum_probs=69.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC----e-E--EEEecCCCCcchhhhhh-hhhC-CCCCceEEEEccCCCHHHHHHHh
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY----R-V--TIVDNLSRGNIGAVKVL-QELF-PEPGRLQFIYADLGDAKAVNKFF  141 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~----~-V--~~~~r~~~~~~~~~~~~-~~~~-~~~~~~~~~~~Dl~d~~~v~~~~  141 (296)
                      +||.|+||+|++|++++..|+..+.    + +  .+++  .....+..+.. .... ........+...-.+    .+.+
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~   78 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLE--IPQAMKALEGVVMELEDCAFPLLAGLEATDDP----KVAF   78 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEEC--CGGGHHHHHHHHHHHHTTTCTTEEEEEEESCH----HHHT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhc--cccchhhHcCchhhhhccccccccccccCCch----hhhc
Confidence            6899999999999999999998753    1 2  2222  12222211111 1111 111223333322222    2334


Q ss_pred             hcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCC--CEEEEEcc
Q 022471          142 SENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV--DTLIYSST  196 (296)
Q Consensus       142 ~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~--~riV~~SS  196 (296)
                        .+.|+||-+||....  ...+..+.+..|..-.+.+.+.+.+...  ..++.+|.
T Consensus        79 --~~advViitaG~~~~--pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvsN  131 (154)
T d1y7ta1          79 --KDADYALLVGAAPRK--AGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGN  131 (154)
T ss_dssp             --TTCSEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             --ccccEEEeecCcCCC--CCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecC
Confidence              578999999997543  2345677889999999999999998643  24545553

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.67  E-value=0.00012  Score=59.16  Aligned_cols=76  Identities=20%  Similarity=0.201  Sum_probs=53.0

Q ss_pred             ccEEEEEcC----------------CChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC
Q 022471           70 VTHVLVTGG----------------AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD  133 (296)
Q Consensus        70 ~k~vlVTGa----------------sG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d  133 (296)
                      +|+||||+|                ||-.|.+||+++.++|++|+++.-.....            .+..+..+  .+..
T Consensus         6 g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~------------~p~~~~~~--~~~t   71 (223)
T d1u7za_           6 HLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP------------TPPFVKRV--DVMT   71 (223)
T ss_dssp             TCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC------------CCTTEEEE--ECCS
T ss_pred             CCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC------------cccccccc--eehh
Confidence            388999986                79999999999999999999986422111            12344433  3455


Q ss_pred             HHHHHHHhhc--CCCcEEEEcccccCcC
Q 022471          134 AKAVNKFFSE--NAFDAVMHFAAVAYVG  159 (296)
Q Consensus       134 ~~~v~~~~~~--~~~D~vi~~Ag~~~~~  159 (296)
                      .+++.+.+.+  ...|++|++|++....
T Consensus        72 ~~~m~~~~~~~~~~~D~~i~aAAvsDf~   99 (223)
T d1u7za_          72 ALEMEAAVNASVQQQNIFIGCAAVADYR   99 (223)
T ss_dssp             HHHHHHHHHHHGGGCSEEEECCBCCSEE
T ss_pred             hHHHHHHHHhhhccceeEeeeechhhhh
Confidence            5555444432  5789999999987653

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.64  E-value=1.6e-05  Score=61.69  Aligned_cols=73  Identities=19%  Similarity=0.264  Sum_probs=49.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +|+|+|.|+ ||.+++++.+|.+.|.+|+++.|+..+.++..+.+...    ..+..  .+..+.       ....+|+|
T Consensus        18 ~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~----~~~~~--~~~~~~-------~~~~~dli   83 (170)
T d1nyta1          18 GLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT----GSIQA--LSMDEL-------EGHEFDLI   83 (170)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG----SSEEE--CCSGGG-------TTCCCSEE
T ss_pred             CCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhc----ccccc--cccccc-------ccccccee
Confidence            389999996 99999999999999999999887655444433333222    22332  222221       11468999


Q ss_pred             EEccccc
Q 022471          150 MHFAAVA  156 (296)
Q Consensus       150 i~~Ag~~  156 (296)
                      ||+..+.
T Consensus        84 IN~Tp~G   90 (170)
T d1nyta1          84 INATSSG   90 (170)
T ss_dssp             EECCSCG
T ss_pred             ecccccC
Confidence            9997654

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.63  E-value=0.00016  Score=54.62  Aligned_cols=40  Identities=23%  Similarity=0.445  Sum_probs=35.2

Q ss_pred             CCCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 022471           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG  106 (296)
Q Consensus        67 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~  106 (296)
                      ...+++|.|.||.|.+|..+++.|.++||+|.+.+|+...
T Consensus         6 ~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~   45 (152)
T d2pv7a2           6 NSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA   45 (152)
T ss_dssp             CTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG
T ss_pred             CCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccc
Confidence            3456899999999999999999999999999999976543

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.59  E-value=3.7e-05  Score=51.26  Aligned_cols=36  Identities=33%  Similarity=0.429  Sum_probs=31.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG  106 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~  106 (296)
                      ++|+|+||+|++|...++.+...|++|+++.+++++
T Consensus        33 ~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k   68 (77)
T d1o8ca2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGREST   68 (77)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHH
Confidence            789999999999999999888899999998865543

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.53  E-value=0.00068  Score=51.01  Aligned_cols=117  Identities=11%  Similarity=0.074  Sum_probs=74.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCC-CCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      .||-|.|+ |.+|+.++..|+..+. +++++|+++...+.....+..... ...+......|  +.+    .+  .+.|+
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~----~~--~~adv   74 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYD----DL--AGADV   74 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGG----GG--TTCSE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--ccc----cc--CCCcE
Confidence            57999995 9999999988887774 888888765443333222221100 01222222221  121    12  57899


Q ss_pred             EEEcccccCcCC---CCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          149 VMHFAAVAYVGE---STLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       149 vi~~Ag~~~~~~---~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      ||-+||......   ...+..+.+..|....+.+.+.+++.+.+-++.+-|
T Consensus        75 vvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivvt  125 (150)
T d1t2da1          75 VIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  125 (150)
T ss_dssp             EEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            999999754322   122355678899999999999999988766655555

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.53  E-value=0.00035  Score=52.42  Aligned_cols=94  Identities=17%  Similarity=0.180  Sum_probs=55.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCC-C---eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDS-Y---RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENA  145 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G-~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~  145 (296)
                      ||+|.|.||||.+|+++++.|+++. +   +++....+........    ..   ...  ....++.+.+.+      .+
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~----~~---~~~--~~~~~~~~~~~~------~~   65 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPS----FG---GTT--GTLQDAFDLEAL------KA   65 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCG----GG---TCC--CBCEETTCHHHH------HT
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccc----cc---CCc--eeeecccchhhh------hc
Confidence            6899999999999999999888763 2   5666654322221111    00   011  112334444333      36


Q ss_pred             CcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcc
Q 022471          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (296)
Q Consensus       146 ~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS  196 (296)
                      +|++|.+++.                  ..+..+.+.+.+.+.+ .+|=.||
T Consensus        66 ~DivF~a~~~------------------~~s~~~~~~~~~~g~~~~VID~Ss   99 (146)
T d1t4ba1          66 LDIIVTCQGG------------------DYTNEIYPKLRESGWQGYWIDAAS   99 (146)
T ss_dssp             CSEEEECSCH------------------HHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CcEEEEecCc------------------hHHHHhhHHHHhcCCCeecccCCc
Confidence            8999998852                  2345677777777754 3333444

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.52  E-value=0.0002  Score=54.40  Aligned_cols=114  Identities=16%  Similarity=0.142  Sum_probs=67.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-------eEEEEecCCCCcchhhhhhh-hh--CCCCCceEEEEccCCCHHHHHHH
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRGNIGAVKVLQ-EL--FPEPGRLQFIYADLGDAKAVNKF  140 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~-~~--~~~~~~~~~~~~Dl~d~~~v~~~  140 (296)
                      +||.|+||+|.+|++++..|+..+-       ++++.+.  .+.....+.+. ++  ... .....+.  .++.  ..+.
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~--~~~~~~~~~l~~~~~~~~~-~~~~~~~--~~~~--~~~~   76 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDI--TPMMGVLDGVLMELQDCAL-PLLKDVI--ATDK--EEIA   76 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECC--GGGHHHHHHHHHHHHHTCC-TTEEEEE--EESC--HHHH
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecC--ccchhhhhhhhhhhccccc-ccccccc--cCcc--cccc
Confidence            7999999999999999999987542       3444443  22222222221 11  111 1222111  1111  1233


Q ss_pred             hhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC--EEEEEc
Q 022471          141 FSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD--TLIYSS  195 (296)
Q Consensus       141 ~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~--riV~~S  195 (296)
                      +  .+.|+||-+||....+  .++..+.++.|..-.+.+.+.+.+...+  .++.+|
T Consensus        77 ~--~~~dvVVitag~~~~~--g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          77 F--KDLDVAILVGSMPRRD--GMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             T--TTCSEEEECCSCCCCT--TCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             c--CCceEEEEecccCCCC--CCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence            3  5789999999975432  2344457889999999999999876432  344444

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.48  E-value=5.4e-05  Score=57.99  Aligned_cols=71  Identities=21%  Similarity=0.236  Sum_probs=49.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +++|+|.|+ |.+|..+++.|.+.|+ +++++.|+..+   +.+..++.     +...     .+.+++.+.+  ...|+
T Consensus        24 ~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~k---a~~l~~~~-----~~~~-----~~~~~~~~~l--~~~Di   87 (159)
T d1gpja2          24 DKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYER---AVELARDL-----GGEA-----VRFDELVDHL--ARSDV   87 (159)
T ss_dssp             TCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHH---HHHHHHHH-----TCEE-----CCGGGHHHHH--HTCSE
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHH---HHHHHHhh-----hccc-----ccchhHHHHh--ccCCE
Confidence            389999997 9999999999999998 58777654333   33333332     1121     2344566666  46899


Q ss_pred             EEEccccc
Q 022471          149 VMHFAAVA  156 (296)
Q Consensus       149 vi~~Ag~~  156 (296)
                      ||++.+..
T Consensus        88 vi~atss~   95 (159)
T d1gpja2          88 VVSATAAP   95 (159)
T ss_dssp             EEECCSSS
T ss_pred             EEEecCCC
Confidence            99998754

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.48  E-value=0.00025  Score=52.99  Aligned_cols=114  Identities=13%  Similarity=0.109  Sum_probs=69.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhC-CCCCceEEE-EccCCCHHHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELF-PEPGRLQFI-YADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~-~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      +||-|.|+ |.+|..++..|+.++. +++++|.++.........+.... ..+...... ..|.   ++    +  .+.|
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~---~~----~--~~ad   71 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY---AD----T--ANSD   71 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG---GG----G--TTCS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcH---HH----h--cCCC
Confidence            68999996 9999999999988874 88888865543322222221110 001122222 2222   22    1  4689


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      ++|-+||....+  ..+..+.++.|....+.+++.+.+.+.+-++.+.|
T Consensus        72 vvvitag~~~~~--~~~r~dl~~~N~~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          72 VIVVTSGAPRKP--GMSREDLIKVNADITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             EEEECCSCC-----------CHHHHHHHHHHHHHHHGGGCTTCEEEECS
T ss_pred             EEEEeeeccCCc--CcchhHHHhHHHHHHHHHHHHHhccCCCceEEEeC
Confidence            999999975432  22345567889999999999999987665655555

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.48  E-value=0.00016  Score=56.39  Aligned_cols=76  Identities=11%  Similarity=0.104  Sum_probs=48.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHH----HHHhhcCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAV----NKFFSENA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v----~~~~~~~~  145 (296)
                      .+|+|+|+ |+||...++.+...|+ +|+++++++.+.    +.++++   +.. ..+...=.+..+.    .+.....+
T Consensus        30 ~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~----~~a~~l---Ga~-~vi~~~~~~~~~~~~~i~~~~~~~g  100 (182)
T d1vj0a2          30 KTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRL----KLAEEI---GAD-LTLNRRETSVEERRKAIMDITHGRG  100 (182)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHH----HHHHHT---TCS-EEEETTTSCHHHHHHHHHHHTTTSC
T ss_pred             CEEEEECC-Cccchhheecccccccccccccccccccc----cccccc---cce-EEEeccccchHHHHHHHHHhhCCCC
Confidence            79999997 8999999999999998 789998654333    233333   111 2222222233222    22222256


Q ss_pred             CcEEEEcccc
Q 022471          146 FDAVMHFAAV  155 (296)
Q Consensus       146 ~D~vi~~Ag~  155 (296)
                      +|+||.+.|.
T Consensus       101 ~Dvvid~vG~  110 (182)
T d1vj0a2         101 ADFILEATGD  110 (182)
T ss_dssp             EEEEEECSSC
T ss_pred             ceEEeecCCc
Confidence            9999999874

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.45  E-value=0.00019  Score=55.19  Aligned_cols=76  Identities=18%  Similarity=0.152  Sum_probs=49.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccC--CCHHHHHHHhhc---CC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL--GDAKAVNKFFSE---NA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl--~d~~~v~~~~~~---~~  145 (296)
                      .+|+|+| +|+||...++.+...|++|+++++++.+.+    .++++   +.... +..|-  .+.+++.+.+.+   .+
T Consensus        28 ~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~----~a~~~---ga~~~-~~~~~~~~~~~~~~~~~~~~~g~g   98 (170)
T d1e3ja2          28 TTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLE----VAKNC---GADVT-LVVDPAKEEESSIIERIRSAIGDL   98 (170)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HHHHT---TCSEE-EECCTTTSCHHHHHHHHHHHSSSC
T ss_pred             CEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHH----HHHHc---CCcEE-EeccccccccchhhhhhhcccccC
Confidence            6899997 699999999999899999999986544332    22333   12222 22222  234444444433   57


Q ss_pred             CcEEEEcccc
Q 022471          146 FDAVMHFAAV  155 (296)
Q Consensus       146 ~D~vi~~Ag~  155 (296)
                      +|++|.++|.
T Consensus        99 ~D~vid~~g~  108 (170)
T d1e3ja2          99 PNVTIDCSGN  108 (170)
T ss_dssp             CSEEEECSCC
T ss_pred             CceeeecCCC
Confidence            9999999984

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=0.00031  Score=53.99  Aligned_cols=76  Identities=14%  Similarity=0.109  Sum_probs=51.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc---CCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NAF  146 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---~~~  146 (296)
                      .+|+|.|+ |++|...++.+...|+ +|+++++++.+.+    .++++   +. -+.+..+-.+..+..+.++.   .++
T Consensus        28 d~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~----~a~~~---Ga-~~~~~~~~~~~~~~~~~~~~~~g~g~   98 (171)
T d1pl8a2          28 HKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLS----KAKEI---GA-DLVLQISKESPQEIARKVEGQLGCKP   98 (171)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHH----HHHHT---TC-SEEEECSSCCHHHHHHHHHHHHTSCC
T ss_pred             CEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHH----HHHHh---CC-cccccccccccccccccccccCCCCc
Confidence            68999986 9999999999999999 7888886543322    23333   11 23334444555555554433   579


Q ss_pred             cEEEEcccc
Q 022471          147 DAVMHFAAV  155 (296)
Q Consensus       147 D~vi~~Ag~  155 (296)
                      |++|.+.|.
T Consensus        99 Dvvid~~G~  107 (171)
T d1pl8a2          99 EVTIECTGA  107 (171)
T ss_dssp             SEEEECSCC
T ss_pred             eEEEeccCC
Confidence            999999983

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.39  E-value=3.1e-05  Score=59.86  Aligned_cols=38  Identities=32%  Similarity=0.320  Sum_probs=32.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNI  108 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~  108 (296)
                      .+|||+||+|++|...++-....|++|+.+.+++.+.+
T Consensus        25 ~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~   62 (167)
T d1tt7a2          25 GSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAAD   62 (167)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHH
T ss_pred             CEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHH
Confidence            57999999999999999888888999999987655543

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.36  E-value=4.8e-05  Score=59.34  Aligned_cols=73  Identities=21%  Similarity=0.284  Sum_probs=47.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      .+|||+||+||+|...++-....|++|+++++++.+.+    .++++   +. -+.+  |-.+. +..+.+.+...|.+|
T Consensus        33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~----~~~~l---Ga-d~vi--~~~~~-~~~~~l~~~~~~~vv  101 (177)
T d1o89a2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHE----YLKSL---GA-SRVL--PRDEF-AESRPLEKQVWAGAI  101 (177)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHH----HHHHH---TE-EEEE--EGGGS-SSCCSSCCCCEEEEE
T ss_pred             CcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHH----HHHhh---cc-cccc--ccccH-HHHHHHHhhcCCeeE
Confidence            58999999999999999988889999999987554432    22332   11 1222  21111 112233335679999


Q ss_pred             Eccc
Q 022471          151 HFAA  154 (296)
Q Consensus       151 ~~Ag  154 (296)
                      ++.|
T Consensus       102 D~Vg  105 (177)
T d1o89a2         102 DTVG  105 (177)
T ss_dssp             ESSC
T ss_pred             EEcc
Confidence            8876

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.35  E-value=0.00029  Score=55.14  Aligned_cols=101  Identities=15%  Similarity=0.100  Sum_probs=54.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC--H-HHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD--A-KAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~-~~v~~~~~~~~~D  147 (296)
                      ++|||+||+|++|...++-....|+++++...  ...++..+..++.    ..-..  .|..+  . +.++++. ..++|
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~--~~~e~~~~l~~~~----gad~v--i~~~~~~~~~~~~~~~-~~GvD  102 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGIC--GTQEKCLFLTSEL----GFDAA--VNYKTGNVAEQLREAC-PGGVD  102 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEE--SSHHHHHHHHHHS----CCSEE--EETTSSCHHHHHHHHC-TTCEE
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCcceeccc--chHHHHhhhhhcc----cceEE--eeccchhHHHHHHHHh-ccCce
Confidence            68999999999999999888889987655432  1222222222222    11122  23333  2 3344433 35799


Q ss_pred             EEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccccc
Q 022471          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATY  200 (296)
Q Consensus       148 ~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~  200 (296)
                      +++.+.|-.           .       ....++.++.  .+++|.+++++.|
T Consensus       103 vv~D~vGg~-----------~-------~~~~~~~l~~--~G~iv~~G~~s~~  135 (187)
T d1vj1a2         103 VYFDNVGGD-----------I-------SNTVISQMNE--NSHIILCGQISQY  135 (187)
T ss_dssp             EEEESSCHH-----------H-------HHHHHTTEEE--EEEEEEC------
T ss_pred             EEEecCCch-----------h-------HHHHhhhccc--cccEEEecccccc
Confidence            999998721           1       1223333332  3589988876665

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.34  E-value=0.00019  Score=55.17  Aligned_cols=77  Identities=21%  Similarity=0.240  Sum_probs=48.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH-HHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA-KAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~D~  148 (296)
                      .+|+|+|++|++|...++.+...|. +|+++++++.+    .+.++++   +.. +.+..+-.|. +.+.+.....++|+
T Consensus        29 ~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~----~~~~~~~---Ga~-~~i~~~~~~~~~~~~~~~~~~~~d~  100 (170)
T d1jvba2          29 KTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEA----VEAAKRA---GAD-YVINASMQDPLAEIRRITESKGVDA  100 (170)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHH----HHHHHHH---TCS-EEEETTTSCHHHHHHHHTTTSCEEE
T ss_pred             CEEEEEeccccceeeeeecccccccccccccccchhh----HHHHHHc---CCc-eeeccCCcCHHHHHHHHhhcccchh
Confidence            7899999999999999999998885 78888754322    2233333   111 2333222222 33333333356999


Q ss_pred             EEEcccc
Q 022471          149 VMHFAAV  155 (296)
Q Consensus       149 vi~~Ag~  155 (296)
                      +|.++|.
T Consensus       101 vid~~g~  107 (170)
T d1jvba2         101 VIDLNNS  107 (170)
T ss_dssp             EEESCCC
T ss_pred             hhccccc
Confidence            9999874

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.32  E-value=0.00091  Score=47.58  Aligned_cols=69  Identities=16%  Similarity=0.215  Sum_probs=54.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      ..+|.|.| +|.+|+-++.+..+.|++|++++.++....  ..         -.-.++.+|..|.+.+.++....++|+|
T Consensus        11 ~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA--~~---------va~~~i~~~~~d~~~l~~~~~~~~~Dvi   78 (111)
T d1kjqa2          11 ATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPA--MH---------VAHRSHVINMLDGDALRRVVELEKPHYI   78 (111)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGG--GG---------GSSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCch--hh---------cCCeEEECCCCCHHHHHHHHHhhCCceE
Confidence            36899999 599999999999999999999996543321  10         1225778999999999998865568988


Q ss_pred             E
Q 022471          150 M  150 (296)
Q Consensus       150 i  150 (296)
                      -
T Consensus        79 T   79 (111)
T d1kjqa2          79 V   79 (111)
T ss_dssp             E
T ss_pred             E
Confidence            5

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.32  E-value=0.00022  Score=54.28  Aligned_cols=37  Identities=19%  Similarity=0.104  Sum_probs=33.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNI  108 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~  108 (296)
                      |||.|.|+ |.||..++..|++.|++|.+++|.+....
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~   37 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYC   37 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhh
Confidence            68999998 99999999999999999999998765443

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.30  E-value=0.00013  Score=57.28  Aligned_cols=80  Identities=14%  Similarity=0.118  Sum_probs=51.6

Q ss_pred             cEEEE-EcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEc---cCCCH-HHHHHHhhc--
Q 022471           71 THVLV-TGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA---DLGDA-KAVNKFFSE--  143 (296)
Q Consensus        71 k~vlV-TGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---Dl~d~-~~v~~~~~~--  143 (296)
                      .+++| +||+|++|...++-....|++|+++.++....++..+.++++...    +.+.-   |..+. +.+.++...  
T Consensus        30 ~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad----~vi~~~~~~~~~~~~~v~~~~~~~g  105 (189)
T d1gu7a2          30 KDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT----QVITEDQNNSREFGPTIKEWIKQSG  105 (189)
T ss_dssp             TCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS----EEEEHHHHHCGGGHHHHHHHHHHHT
T ss_pred             CEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcccc----EEEeccccchhHHHHHHHHHHhhcc
Confidence            44555 799999999998888888999999987766666555556555221    22221   22221 223333322  


Q ss_pred             CCCcEEEEccc
Q 022471          144 NAFDAVMHFAA  154 (296)
Q Consensus       144 ~~~D~vi~~Ag  154 (296)
                      .++|+++++.|
T Consensus       106 ~~vdvv~D~vg  116 (189)
T d1gu7a2         106 GEAKLALNCVG  116 (189)
T ss_dssp             CCEEEEEESSC
T ss_pred             CCceEEEECCC
Confidence            56999999876

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.29  E-value=0.00027  Score=54.54  Aligned_cols=73  Identities=19%  Similarity=0.283  Sum_probs=50.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+|+|.|+ ||.+++++..|.+.+.+|+++.|+..+.+...+.+...    .++.....|-.+       .  ..+|+||
T Consensus        19 k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~----~~~~~~~~~~~~-------~--~~~diiI   84 (171)
T d1p77a1          19 QHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY----GNIQAVSMDSIP-------L--QTYDLVI   84 (171)
T ss_dssp             CEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG----SCEEEEEGGGCC-------C--SCCSEEE
T ss_pred             CEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhc----cccchhhhcccc-------c--cccceee
Confidence            89999985 99999999999998889999988765544444433322    344444444221       1  5789999


Q ss_pred             EcccccC
Q 022471          151 HFAAVAY  157 (296)
Q Consensus       151 ~~Ag~~~  157 (296)
                      |+.....
T Consensus        85 N~tp~g~   91 (171)
T d1p77a1          85 NATSAGL   91 (171)
T ss_dssp             ECCCC--
T ss_pred             ecccccc
Confidence            9987643

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.27  E-value=0.00052  Score=51.71  Aligned_cols=75  Identities=23%  Similarity=0.352  Sum_probs=56.1

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEEE
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMH  151 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi~  151 (296)
                      +++|.|. |-+|..++++|.++|++|++++.++....   +.+++..  ..++.++.+|.+|++.++++-- .+.|.+|-
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~---~~~~~~~--~~~~~vi~Gd~~d~~~L~~a~i-~~a~~vi~   77 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDI---KQLEQRL--GDNADVIPGDSNDSSVLKKAGI-DRCRAILA   77 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHH---HHHHHHH--CTTCEEEESCTTSHHHHHHHTT-TTCSEEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHH---HHHHHhh--cCCcEEEEccCcchHHHHHhcc-ccCCEEEE
Confidence            5888887 89999999999999999999985443222   2222221  2468899999999998887643 46888886


Q ss_pred             cc
Q 022471          152 FA  153 (296)
Q Consensus       152 ~A  153 (296)
                      +.
T Consensus        78 ~~   79 (153)
T d1id1a_          78 LS   79 (153)
T ss_dssp             CS
T ss_pred             cc
Confidence            65

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.24  E-value=0.00019  Score=55.68  Aligned_cols=74  Identities=15%  Similarity=0.088  Sum_probs=47.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC---HHHHHHHhhcCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD---AKAVNKFFSENAF  146 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d---~~~v~~~~~~~~~  146 (296)
                      .+|+|.|+ |+||...++.+...|+ +|+++++++.+.    +..+++   + -.++  .|..+   .+.+.+.....++
T Consensus        29 ~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~----~~a~~l---G-a~~~--i~~~~~~~~~~v~~~t~g~G~   97 (174)
T d1jqba2          29 SSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICV----EAAKFY---G-ATDI--LNYKNGHIEDQVMKLTNGKGV   97 (174)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHH----HHHHHH---T-CSEE--ECGGGSCHHHHHHHHTTTSCE
T ss_pred             CEEEEEcC-CcchhhhhhhhhcccccccccccchhhhH----HHHHhh---C-cccc--ccccchhHHHHHHHHhhccCc
Confidence            68999986 9999999999998997 688887543322    223333   1 1122  23333   2344444433569


Q ss_pred             cEEEEcccc
Q 022471          147 DAVMHFAAV  155 (296)
Q Consensus       147 D~vi~~Ag~  155 (296)
                      |++|.++|.
T Consensus        98 D~vid~~g~  106 (174)
T d1jqba2          98 DRVIMAGGG  106 (174)
T ss_dssp             EEEEECSSC
T ss_pred             ceEEEccCC
Confidence            999999984

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.21  E-value=0.00062  Score=52.11  Aligned_cols=72  Identities=15%  Similarity=0.143  Sum_probs=50.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      .+|+|.|+ |+||...++.+...|++++++++++.+.    +.++++.   .. +  ..|..+.+......  .++|++|
T Consensus        32 ~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~----~~a~~lG---ad-~--~i~~~~~~~~~~~~--~~~D~vi   98 (168)
T d1uufa2          32 KKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKR----EAAKALG---AD-E--VVNSRNADEMAAHL--KSFDFIL   98 (168)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGH----HHHHHHT---CS-E--EEETTCHHHHHTTT--TCEEEEE
T ss_pred             CEEEEecc-chHHHHHHHHhhcccccchhhccchhHH----HHHhccC---Cc-E--EEECchhhHHHHhc--CCCceee
Confidence            78999986 9999999988888999999988654332    2333331   11 2  24556665554443  5799999


Q ss_pred             Ecccc
Q 022471          151 HFAAV  155 (296)
Q Consensus       151 ~~Ag~  155 (296)
                      .+.|.
T Consensus        99 d~~g~  103 (168)
T d1uufa2          99 NTVAA  103 (168)
T ss_dssp             ECCSS
T ss_pred             eeeec
Confidence            99874

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.17  E-value=0.00045  Score=52.94  Aligned_cols=73  Identities=21%  Similarity=0.246  Sum_probs=47.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCC-CHHHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG-DAKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~v~~~~~~~~~D~v  149 (296)
                      .+|+|.|+ |++|...++.+...|++|+++++++.+.+.    ++++   +.. +++  |-. +.+..++..  ..+|.+
T Consensus        29 ~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~----a~~l---Ga~-~~i--~~~~~~~~~~~~~--~~~d~v   95 (168)
T d1piwa2          29 KKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKRED----AMKM---GAD-HYI--ATLEEGDWGEKYF--DTFDLI   95 (168)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHH----HHHH---TCS-EEE--EGGGTSCHHHHSC--SCEEEE
T ss_pred             CEEEEECC-CCcchhHHHHhhhccccccccccchhHHHH----hhcc---CCc-EEe--eccchHHHHHhhh--cccceE
Confidence            78999986 999999888887889999999986655433    2333   111 222  222 222233332  579999


Q ss_pred             EEccccc
Q 022471          150 MHFAAVA  156 (296)
Q Consensus       150 i~~Ag~~  156 (296)
                      +.+.+..
T Consensus        96 i~~~~~~  102 (168)
T d1piwa2          96 VVCASSL  102 (168)
T ss_dssp             EECCSCS
T ss_pred             EEEecCC
Confidence            9987753

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.09  E-value=0.0048  Score=42.03  Aligned_cols=71  Identities=15%  Similarity=0.155  Sum_probs=46.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +|+|+|.|. |..|.++++.|.+.|++|++.|.+....  ..+.++      ....+...+. +.+.    +  .++|.|
T Consensus         5 ~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~--~~~~~~------~~~~~~~~~~-~~~~----~--~~~d~v   68 (93)
T d2jfga1           5 GKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPP--GLDKLP------EAVERHTGSL-NDEW----L--MAADLI   68 (93)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCT--TGGGSC------TTSCEEESBC-CHHH----H--HHCSEE
T ss_pred             CCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCch--hHHHHh------hccceeeccc-chhh----h--ccCCEE
Confidence            489999997 8899999999999999999999644322  122211      1233333332 2222    2  257999


Q ss_pred             EEccccc
Q 022471          150 MHFAAVA  156 (296)
Q Consensus       150 i~~Ag~~  156 (296)
                      |-.-|+.
T Consensus        69 i~SPGi~   75 (93)
T d2jfga1          69 VASPGIA   75 (93)
T ss_dssp             EECTTSC
T ss_pred             EECCCCC
Confidence            9888764

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.09  E-value=0.0051  Score=43.51  Aligned_cols=93  Identities=13%  Similarity=0.094  Sum_probs=61.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +|+|+|.|+ |-+|..-++.|++.|++|++++...  ..+..+.++     ..++.+..-+..+. +    +  .+.+.|
T Consensus        12 ~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~--~~~~~~~~~-----~~~i~~~~~~~~~~-d----l--~~~~lv   76 (113)
T d1pjqa1          12 DRDCLIVGG-GDVAERKARLLLEAGARLTVNALTF--IPQFTVWAN-----EGMLTLVEGPFDET-L----L--DSCWLA   76 (113)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSC--CHHHHHHHT-----TTSCEEEESSCCGG-G----G--TTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccC--ChHHHHHHh-----cCCceeeccCCCHH-H----h--CCCcEE
Confidence            399999996 8899999999999999999987432  222222221     24677776665532 1    2  467888


Q ss_pred             EEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      +.+.+-         .        .-...+...+++.+  .+|++..
T Consensus        77 ~~at~d---------~--------~~n~~i~~~a~~~~--ilVNv~D  104 (113)
T d1pjqa1          77 IAATDD---------D--------TVNQRVSDAAESRR--IFCNVVD  104 (113)
T ss_dssp             EECCSC---------H--------HHHHHHHHHHHHTT--CEEEETT
T ss_pred             eecCCC---------H--------HHHHHHHHHHHHcC--CEEEeCC
Confidence            865431         1        11335777787765  4888776

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.08  E-value=0.0015  Score=50.12  Aligned_cols=75  Identities=17%  Similarity=0.267  Sum_probs=45.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEE-EecCCCCcchhhhhhhhhCCCCCceEEEEccCCCH-HHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTI-VDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA-KAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~D~  148 (296)
                      .+|+|.|+ |+||...++.+...|+++++ .++++.    ..+.++++    +..+++..+-.|. +.++++. .+++|+
T Consensus        30 ~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~----k~~~a~~~----Ga~~~i~~~~~~~~~~i~~~t-~gg~D~   99 (174)
T d1f8fa2          30 SSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVES----RLELAKQL----GATHVINSKTQDPVAAIKEIT-DGGVNF   99 (174)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHH----HHHHHHHH----TCSEEEETTTSCHHHHHHHHT-TSCEEE
T ss_pred             CEEEEeCC-CHHHhhhhhcccccccceeeeeccHHH----HHHHHHHc----CCeEEEeCCCcCHHHHHHHHc-CCCCcE
Confidence            78999997 99999999988888986654 453332    22333333    1223332222222 2333332 357999


Q ss_pred             EEEcccc
Q 022471          149 VMHFAAV  155 (296)
Q Consensus       149 vi~~Ag~  155 (296)
                      +|.+.|.
T Consensus       100 vid~~G~  106 (174)
T d1f8fa2         100 ALESTGS  106 (174)
T ss_dssp             EEECSCC
T ss_pred             EEEcCCc
Confidence            9999884

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.05  E-value=0.0023  Score=48.50  Aligned_cols=106  Identities=16%  Similarity=0.261  Sum_probs=62.9

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCC----CCceEEEEccCCCHHHHHHHhhc--
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE----PGRLQFIYADLGDAKAVNKFFSE--  143 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~v~~~~~~--  143 (296)
                      |++|-+.| .|-+|+.+|+.|+++|++|.+.+|+....+...+.-......    -.....+..-+.+.+.++.++..  
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~   79 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDD   79 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTT
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccc
Confidence            67899997 699999999999999999999987644332221110000000    02234555556666666665432  


Q ss_pred             ------CCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Q 022471          144 ------NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIY  193 (296)
Q Consensus       144 ------~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~  193 (296)
                            .+=+++|.+....        +        ..+..+.+.+.+.+. +++-
T Consensus        80 ~~~~~l~~g~iiid~st~~--------p--------~~~~~~~~~~~~~gi-~~~d  118 (162)
T d3cuma2          80 GLLAHIAPGTLVLECSTIA--------P--------TSARKIHAAARERGL-AMLD  118 (162)
T ss_dssp             CHHHHSCTTCEEEECSCCC--------H--------HHHHHHHHHHHHTTC-EEEE
T ss_pred             cccccCCCCCEEEECCCCC--------H--------HHHHHHHHHHHHCCC-cEEe
Confidence                  1225666665432        1        234557777777664 5554

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.03  E-value=0.0013  Score=50.54  Aligned_cols=78  Identities=15%  Similarity=0.023  Sum_probs=48.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC-HHHHHHHhhcCCCc
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFD  147 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~D  147 (296)
                      +.+|+|.|+ ||+|...+..+...|+ +|+++++++.+.+    ..++.   +....+...|-.+ .+...+....+++|
T Consensus        29 GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~----~a~~~---Ga~~~i~~~~~~~~~~~~~~~~~~~G~D  100 (176)
T d2jhfa2          29 GSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFA----KAKEV---GATECVNPQDYKKPIQEVLTEMSNGGVD  100 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH----HHHHT---TCSEEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred             CCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHH----HHHHh---CCeeEEecCCchhHHHHHHHHHhcCCCC
Confidence            378999998 7899999999999985 7777776544332    22222   1111111122222 23344444446899


Q ss_pred             EEEEcccc
Q 022471          148 AVMHFAAV  155 (296)
Q Consensus       148 ~vi~~Ag~  155 (296)
                      ++|.+.|.
T Consensus       101 ~vid~~G~  108 (176)
T d2jhfa2         101 FSFEVIGR  108 (176)
T ss_dssp             EEEECSCC
T ss_pred             EEEecCCc
Confidence            99999884

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.02  E-value=0.00023  Score=55.07  Aligned_cols=34  Identities=24%  Similarity=0.043  Sum_probs=31.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~  105 (296)
                      |+|.|.|| |.+|..++..|+++|++|++++|++.
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~   35 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQ   35 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHH
Confidence            79999997 99999999999999999999997543

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.00  E-value=0.0016  Score=50.27  Aligned_cols=77  Identities=12%  Similarity=-0.006  Sum_probs=49.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC-HHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~D~  148 (296)
                      .+|+|+|+ |++|...++.+...|+ +|+++++++.+.+    ..+++   +....+-.-|-.+ .+.+.+.....++|+
T Consensus        31 ~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~----~Ak~~---GA~~~in~~~~~~~~~~~~~~~~g~G~d~  102 (176)
T d1d1ta2          31 STCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFE----KAMAV---GATECISPKDSTKPISEVLSEMTGNNVGY  102 (176)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH----HHHHH---TCSEEECGGGCSSCHHHHHHHHHTSCCCE
T ss_pred             CEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHH----HHHhc---CCcEEECccccchHHHHHHHHhccccceE
Confidence            78999986 9999999999999995 7999986654433    22333   1221111122222 334444444468999


Q ss_pred             EEEcccc
Q 022471          149 VMHFAAV  155 (296)
Q Consensus       149 vi~~Ag~  155 (296)
                      +|.+.|.
T Consensus       103 vi~~~g~  109 (176)
T d1d1ta2         103 TFEVIGH  109 (176)
T ss_dssp             EEECSCC
T ss_pred             EEEeCCc
Confidence            9999874

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.93  E-value=0.0022  Score=49.28  Aligned_cols=76  Identities=16%  Similarity=0.121  Sum_probs=47.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCC--CHHHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG--DAKAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--d~~~v~~~~~~~~~D  147 (296)
                      .+|+|.|+ |+||...++.+...|+ .|++.++++.+.    +..+++    ...+.+...-.  ..+.+.+.....++|
T Consensus        30 ~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~----~~a~~~----Ga~~~i~~~~~~~~~~~~~~~~~~~G~d  100 (174)
T d1e3ia2          30 STCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKF----PKAKAL----GATDCLNPRELDKPVQDVITELTAGGVD  100 (174)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH----HHHHHT----TCSEEECGGGCSSCHHHHHHHHHTSCBS
T ss_pred             CEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHH----HHHHHh----CCCcccCCccchhhhhhhHhhhhcCCCc
Confidence            78999975 9999999999999998 566666544332    222332    11222222111  233444444447899


Q ss_pred             EEEEcccc
Q 022471          148 AVMHFAAV  155 (296)
Q Consensus       148 ~vi~~Ag~  155 (296)
                      ++|.++|.
T Consensus       101 ~vie~~G~  108 (174)
T d1e3ia2         101 YSLDCAGT  108 (174)
T ss_dssp             EEEESSCC
T ss_pred             EEEEeccc
Confidence            99999984

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.92  E-value=0.0018  Score=49.75  Aligned_cols=76  Identities=18%  Similarity=0.046  Sum_probs=48.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCC--HHHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD--AKAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~D  147 (296)
                      .+|+|.|+ |++|...++.+...|+ +|+++++++.+.+    ..+++    .-.+++...-.|  .+.+.+.....++|
T Consensus        29 ~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~----~a~~l----Ga~~~i~~~~~d~~~~~~~~~~~~~G~d   99 (174)
T d1p0fa2          29 STCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFP----KAIEL----GATECLNPKDYDKPIYEVICEKTNGGVD   99 (174)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH----HHHHT----TCSEEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred             CEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHH----HHHHc----CCcEEEcCCCchhHHHHHHHHhcCCCCc
Confidence            78999985 9999999999999997 6777776544332    22332    112222211122  23444444446899


Q ss_pred             EEEEcccc
Q 022471          148 AVMHFAAV  155 (296)
Q Consensus       148 ~vi~~Ag~  155 (296)
                      ++|-++|.
T Consensus       100 ~vid~~g~  107 (174)
T d1p0fa2         100 YAVECAGR  107 (174)
T ss_dssp             EEEECSCC
T ss_pred             EEEEcCCC
Confidence            99999874

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.87  E-value=0.0016  Score=50.36  Aligned_cols=31  Identities=19%  Similarity=0.446  Sum_probs=26.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhC-CCeEEEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKD-SYRVTIV  100 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~-G~~V~~~  100 (296)
                      |++|.|.||||+.|.++.+-|.++ ..++..+
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l   32 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITAL   32 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEee
Confidence            689999999999999999999997 4566544

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.78  E-value=0.0029  Score=47.81  Aligned_cols=70  Identities=19%  Similarity=0.224  Sum_probs=44.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCC----CCceEEEEccCCCHHHHHHHh
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE----PGRLQFIYADLGDAKAVNKFF  141 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~v~~~~  141 (296)
                      |+|-|.| .|-+|+.+|+.|+++|++|++.+|++...++..+.-.....+    -.+.+.+..-+.+.+.+++++
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~   74 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVA   74 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHH
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHH
Confidence            4688887 599999999999999999999987654433322211000000    012344455566677776655

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=96.78  E-value=0.0092  Score=44.32  Aligned_cols=95  Identities=19%  Similarity=0.180  Sum_probs=54.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCC----CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDS----YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (296)
                      |+|.|.||||..|.++++.|+++.    .++..+..+..... ..    ..   .... ....+..+.+.    +  .++
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk-~~----~~---~~~~-~~~~~~~~~~~----~--~~~   65 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVP-AP----NF---GKDA-GMLHDAFDIES----L--KQL   65 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSB-CC----CS---SSCC-CBCEETTCHHH----H--TTC
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccccccc-cc----cc---CCcc-eeeecccchhh----h--ccc
Confidence            579999999999999999888643    35555543221111 00    00   0111 11112233332    2  478


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcccc
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSSTCA  198 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~-riV~~SS~~  198 (296)
                      |++|.+..-                  .-+..+.+.+.+.+.+ .+|=.||..
T Consensus        66 DvvF~alp~------------------~~s~~~~~~l~~~g~~~~VIDlSsdf  100 (147)
T d1mb4a1          66 DAVITCQGG------------------SYTEKVYPALRQAGWKGYWIDAASTL  100 (147)
T ss_dssp             SEEEECSCH------------------HHHHHHHHHHHHTTCCSEEEESSSTT
T ss_pred             cEEEEecCc------------------hHHHHHhHHHHHcCCceEEEeCCccc
Confidence            999988752                  1245677888887764 455567743

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.75  E-value=0.00037  Score=54.55  Aligned_cols=41  Identities=17%  Similarity=0.211  Sum_probs=34.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhh
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVK  112 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~  112 (296)
                      ++|.|.|| |-+|+.+|..++..|++|++.|+++...+...+
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~   45 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLA   45 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhh
Confidence            68999997 999999999999999999999986654444333

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.74  E-value=0.0049  Score=45.75  Aligned_cols=31  Identities=23%  Similarity=0.392  Sum_probs=26.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC---eEEEEe
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY---RVTIVD  101 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~---~V~~~~  101 (296)
                      ++|.|.||||.+|.++++.|.+++|   ++..++
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~   36 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLA   36 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEe
Confidence            7899999999999999999987654   666665

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.71  E-value=0.0011  Score=50.46  Aligned_cols=33  Identities=24%  Similarity=0.194  Sum_probs=29.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      |+|.|.|. |.+|+.+++.|.+.|++|++.+|++
T Consensus         1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~   33 (165)
T d2f1ka2           1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQ   33 (165)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCc
Confidence            56888875 9999999999999999999998764

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.70  E-value=0.0038  Score=47.63  Aligned_cols=76  Identities=21%  Similarity=0.212  Sum_probs=46.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      .+|+|.|+ |++|...++.+...|+ .|+++++++.+    .+.+++.    ...+++..+=.+.+.+.+.....++|++
T Consensus        34 ~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k----~~~~~~~----ga~~~i~~~~~~~~~~~~~~~~~g~d~v  104 (172)
T d1h2ba2          34 AYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEK----LKLAERL----GADHVVDARRDPVKQVMELTRGRGVNVA  104 (172)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHH----HHHHHHT----TCSEEEETTSCHHHHHHHHTTTCCEEEE
T ss_pred             CEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHH----HHHHhhc----ccceeecCcccHHHHHHHhhCCCCceEE
Confidence            78999986 9999999998888886 55666654322    2233333    1223333222223333443333579999


Q ss_pred             EEcccc
Q 022471          150 MHFAAV  155 (296)
Q Consensus       150 i~~Ag~  155 (296)
                      |.++|.
T Consensus       105 id~~g~  110 (172)
T d1h2ba2         105 MDFVGS  110 (172)
T ss_dssp             EESSCC
T ss_pred             EEecCc
Confidence            999984

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.68  E-value=0.0053  Score=46.77  Aligned_cols=76  Identities=14%  Similarity=0.032  Sum_probs=45.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCe-EEEEecCCCCcchhhhhhhhhCCCCCceEEEEc-c-CCCHHHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA-D-LGDAKAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-D-l~d~~~v~~~~~~~~~D  147 (296)
                      .+|+|.|+ ||+|...++.+...|+. |++.++++.+    .+..+++.    .-+++.. | -.+.+...+.....++|
T Consensus        30 ~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k----~~~ak~lG----a~~~i~~~~~~~~~~~~~~~~~~~g~D  100 (176)
T d2fzwa2          30 SVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDK----FARAKEFG----ATECINPQDFSKPIQEVLIEMTDGGVD  100 (176)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGG----HHHHHHHT----CSEEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred             CEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHH----HHHHHHhC----CcEEEeCCchhhHHHHHHHHHcCCCCc
Confidence            78999997 68999999999999975 5555443322    23333331    1122221 1 12233333333336899


Q ss_pred             EEEEcccc
Q 022471          148 AVMHFAAV  155 (296)
Q Consensus       148 ~vi~~Ag~  155 (296)
                      ++|.+.|.
T Consensus       101 ~vid~~G~  108 (176)
T d2fzwa2         101 YSFECIGN  108 (176)
T ss_dssp             EEEECSCC
T ss_pred             EeeecCCC
Confidence            99999873

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.64  E-value=0.0054  Score=47.13  Aligned_cols=33  Identities=18%  Similarity=0.333  Sum_probs=27.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCC-CeEEEEec
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVDN  102 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~r  102 (296)
                      |++|.|.||||.+|.++++.|.+.. .++..+..
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s   34 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSS   34 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeec
Confidence            6899999999999999999999864 36666553

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.62  E-value=0.0014  Score=50.06  Aligned_cols=35  Identities=14%  Similarity=0.312  Sum_probs=30.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRG  106 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~  106 (296)
                      |+|+|.|+ ||.+++++..|.+.|. +|.++.|+..+
T Consensus        18 ~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~k   53 (167)
T d1npya1          18 AKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKT   53 (167)
T ss_dssp             SCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHH
Confidence            78999996 9999999999999997 78888775543

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.60  E-value=0.0033  Score=47.81  Aligned_cols=34  Identities=24%  Similarity=0.461  Sum_probs=29.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLS  104 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~  104 (296)
                      ||+|+|.| .|.||..+++.|.+.|+  +|++.|++.
T Consensus         1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~   36 (171)
T d2g5ca2           1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINP   36 (171)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECCh
Confidence            68899998 59999999999999996  677777653

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.51  E-value=0.0032  Score=47.72  Aligned_cols=34  Identities=21%  Similarity=0.152  Sum_probs=29.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~  105 (296)
                      .+|+|.|+ |+||...++.+...|++|+++++++.
T Consensus        29 ~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~   62 (166)
T d1llua2          29 QWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDA   62 (166)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CEEEEeec-cccHHHHHHHHHHcCCccceecchhh
Confidence            78999886 99999999888889999999986543

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.44  E-value=0.0019  Score=50.61  Aligned_cols=74  Identities=15%  Similarity=0.062  Sum_probs=46.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCC--C-HHHHHHHhhcCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG--D-AKAVNKFFSENAF  146 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--d-~~~v~~~~~~~~~  146 (296)
                      .+|+|.|+ |+||...++.+...|+ +|+++++++.+.    +.+++.   +  ...+. |-.  + .+.+.++....++
T Consensus        27 ~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl----~~a~~~---G--a~~~~-~~~~~~~~~~i~~~t~g~g~   95 (195)
T d1kola2          27 STVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARL----AHAKAQ---G--FEIAD-LSLDTPLHEQIAALLGEPEV   95 (195)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHH----HHHHHT---T--CEEEE-TTSSSCHHHHHHHHHSSSCE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhh----Hhhhhc---c--ccEEE-eCCCcCHHHHHHHHhCCCCc
Confidence            79999986 9999888888877887 677777543322    222332   1  22221 222  2 2345555444679


Q ss_pred             cEEEEcccc
Q 022471          147 DAVMHFAAV  155 (296)
Q Consensus       147 D~vi~~Ag~  155 (296)
                      |++|.+.|.
T Consensus        96 D~vid~vG~  104 (195)
T d1kola2          96 DCAVDAVGF  104 (195)
T ss_dssp             EEEEECCCT
T ss_pred             EEEEECccc
Confidence            999999984

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.40  E-value=0.0092  Score=45.62  Aligned_cols=38  Identities=11%  Similarity=0.159  Sum_probs=32.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcch
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIG  109 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~  109 (296)
                      .+|-|.|- |-+|+.+++.|+++|++|++++|++.+.++
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~   40 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDD   40 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHH
Confidence            57889985 999999999999999999999987654433

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=96.37  E-value=0.0028  Score=45.97  Aligned_cols=70  Identities=14%  Similarity=0.070  Sum_probs=50.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      |+++|.|. |-+|.++++.|  +|++|++++.++...+    .+..     .++.++.+|.++++.++++-- .+.+.+|
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~----~~~~-----~~~~~i~Gd~~~~~~L~~a~i-~~A~~vi   67 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRK----KVLR-----SGANFVHGDPTRVSDLEKANV-RGARAVI   67 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHH----HHHH-----TTCEEEESCTTSHHHHHHTTC-TTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHH----HHHh-----cCccccccccCCHHHHHHhhh-hcCcEEE
Confidence            57889985 88999999999  4667888875443322    2221     467889999999998888532 4678888


Q ss_pred             Ecc
Q 022471          151 HFA  153 (296)
Q Consensus       151 ~~A  153 (296)
                      -+.
T Consensus        68 ~~~   70 (129)
T d2fy8a1          68 VNL   70 (129)
T ss_dssp             ECC
T ss_pred             Eec
Confidence            543

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.36  E-value=0.0025  Score=49.25  Aligned_cols=78  Identities=15%  Similarity=0.139  Sum_probs=48.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCC-CceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEP-GRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      |+|.|.|| |-.|.++|..|+++|++|.+++|...  .+..+.+.+...++ ........++.-.+++.+++  .+.|+|
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~--~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~ad~I   75 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD--TEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCL--ENAEVV   75 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG--HHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHH--TTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc--HHHHHHHhhhhhhhhhcchhccccccccccHHHHH--hccchh
Confidence            68999996 99999999999999999999986322  22233332221110 01111112233345667777  568999


Q ss_pred             EEcc
Q 022471          150 MHFA  153 (296)
Q Consensus       150 i~~A  153 (296)
                      |.+.
T Consensus        76 i~av   79 (180)
T d1txga2          76 LLGV   79 (180)
T ss_dssp             EECS
T ss_pred             hccc
Confidence            8754

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.30  E-value=0.0023  Score=46.13  Aligned_cols=34  Identities=24%  Similarity=0.369  Sum_probs=30.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~  105 (296)
                      ++++|.|| |.||.++|..|.+.|++|+++.+.++
T Consensus        24 ~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          24 KRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            78999995 99999999999999999999987553

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.26  E-value=0.0015  Score=51.14  Aligned_cols=42  Identities=29%  Similarity=0.290  Sum_probs=35.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhh
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKV  113 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~  113 (296)
                      |+|.|.|| |-+|+.+|..++..|++|+++|+++...+...+.
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~   46 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKG   46 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhh
Confidence            78999997 9999999999999999999999876554444333

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.21  E-value=0.01  Score=45.19  Aligned_cols=82  Identities=18%  Similarity=0.073  Sum_probs=51.8

Q ss_pred             CCCCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccC--CCHHHHHHHhhc
Q 022471           66 HEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL--GDAKAVNKFFSE  143 (296)
Q Consensus        66 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl--~d~~~v~~~~~~  143 (296)
                      +..| |+|+|.|-|.-+|+-++..|+++|+.|+.+............   ..    .-......|+  ...+.+++..  
T Consensus        26 ~l~G-K~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~---~~----~~~~~~~~~~~~~~~~~lk~~~--   95 (171)
T d1edza1          26 RLYG-KKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGE---SL----KLNKHHVEDLGEYSEDLLKKCS--   95 (171)
T ss_dssp             TTTT-CEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCC---CS----SCCCCEEEEEEECCHHHHHHHH--
T ss_pred             CCCC-CEEEEECCccccHHHHHHHHHHCCCEEEEecccccccccccc---ce----eeeeeccccccccchhHHhhcc--
Confidence            4445 999999999999999999999999999988643211000000   00    0001112222  3456677766  


Q ss_pred             CCCcEEEEcccccC
Q 022471          144 NAFDAVMHFAAVAY  157 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~  157 (296)
                      ...|++|..+|...
T Consensus        96 ~~aDIvIsavG~p~  109 (171)
T d1edza1          96 LDSDVVITGVPSEN  109 (171)
T ss_dssp             HHCSEEEECCCCTT
T ss_pred             ccCCEEEEccCCCc
Confidence            34799999888654

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=96.19  E-value=0.00096  Score=52.21  Aligned_cols=37  Identities=22%  Similarity=0.193  Sum_probs=32.2

Q ss_pred             CCCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        67 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      +..|++|.|.|| |-.|.+++..|+++|++|.+++|++
T Consensus         4 ~~~m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~   40 (189)
T d1n1ea2           4 LLYLNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNE   40 (189)
T ss_dssp             CCCEEEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCH
T ss_pred             cceeceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecH
Confidence            345688999995 8899999999999999999998754

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.12  E-value=0.003  Score=48.55  Aligned_cols=77  Identities=14%  Similarity=0.221  Sum_probs=47.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +|+|+|.|+ ||.+++++.+|.+.| +|+++.|+..+.+.+.+.+............-..|+.+      ..  ...|++
T Consensus        18 ~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~------~~--~~~dli   87 (177)
T d1nvta1          18 DKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDV------DL--DGVDII   87 (177)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTC------CC--TTCCEE
T ss_pred             CCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhhh------cc--chhhhh
Confidence            389999985 899999999998777 89999887655555544443322111000111112211      12  468999


Q ss_pred             EEccccc
Q 022471          150 MHFAAVA  156 (296)
Q Consensus       150 i~~Ag~~  156 (296)
                      ||+....
T Consensus        88 In~tp~g   94 (177)
T d1nvta1          88 INATPIG   94 (177)
T ss_dssp             EECSCTT
T ss_pred             ccCCccc
Confidence            9987654

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.10  E-value=0.0036  Score=49.18  Aligned_cols=33  Identities=30%  Similarity=0.314  Sum_probs=28.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      |+|.|.| .|++|..+|..|+++|++|+++|.+.
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~   33 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSS   33 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCH
Confidence            5688886 69999999999999999999998543

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.02  E-value=0.0069  Score=42.99  Aligned_cols=34  Identities=29%  Similarity=0.503  Sum_probs=30.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~  105 (296)
                      ++++|.|| |.||.++|..|.+.|.+|+++.|.++
T Consensus        23 ~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          23 KSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            78999996 99999999999999999999987654

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.98  E-value=0.0061  Score=43.44  Aligned_cols=34  Identities=18%  Similarity=0.217  Sum_probs=30.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~  105 (296)
                      ++|+|.|| |.||-++|..|++.|.+|+++.|.++
T Consensus        23 ~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          23 KKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             CEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence            78999996 99999999999999999999987653

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.97  E-value=0.0067  Score=43.09  Aligned_cols=34  Identities=21%  Similarity=0.306  Sum_probs=30.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~  105 (296)
                      ++++|.|| |.+|.++|..|.+.|++|+++.|.++
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            78999985 99999999999999999999987654

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=95.94  E-value=0.006  Score=43.77  Aligned_cols=34  Identities=29%  Similarity=0.516  Sum_probs=30.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~  105 (296)
                      ++++|.|| |++|.++|..|.+.|.+|+++.+.++
T Consensus        31 ~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          31 SRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            78999985 99999999999999999999987654

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.88  E-value=0.037  Score=44.46  Aligned_cols=31  Identities=29%  Similarity=0.454  Sum_probs=28.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEec
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDN  102 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r  102 (296)
                      ++|+|.| .||+|++++..|+..|. +++++|.
T Consensus        31 ~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~   62 (247)
T d1jw9b_          31 SRVLIVG-LGGLGCAASQYLASAGVGNLTLLDF   62 (247)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred             CCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECC
Confidence            7999999 59999999999999998 7888874

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.85  E-value=0.0071  Score=43.46  Aligned_cols=34  Identities=44%  Similarity=0.683  Sum_probs=30.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~  105 (296)
                      |+|+|.|| |++|.++|..|++.|.+|+++.+.++
T Consensus        31 k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          31 NNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CEEEEECC-hHHHHHHHHHhhccceEEEEEEecCc
Confidence            78999985 99999999999999999999987543

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=95.82  E-value=0.013  Score=41.73  Aligned_cols=34  Identities=21%  Similarity=0.305  Sum_probs=30.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~  105 (296)
                      ++++|.|| |.||-++|..|++.|.+|+++.+..+
T Consensus        23 ~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          23 GKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            78999995 99999999999999999999987654

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=95.82  E-value=0.026  Score=41.89  Aligned_cols=79  Identities=19%  Similarity=0.253  Sum_probs=50.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhC--CCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccC----------------
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL----------------  131 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl----------------  131 (296)
                      ||+|.|.|+||-||.....-+.+.  .++|+++.- ..+.+.+.+.+.+..+   +..+ ..|-                
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa-~~N~~~L~~q~~~f~p---k~v~-i~d~~~~~~l~~~l~~~~~~   75 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVA-GKNVTRMVEQCLEFSP---RYAV-MDDEASAKLLKTMLQQQGSR   75 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEE-SSCHHHHHHHHHHHCC---SEEE-ESSHHHHHHHHHHHHHTTCC
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEe-cCcHHHHHHHHHHHhh---cccc-cccHHHHHHHHHHhhhhccc
Confidence            689999999999999998888775  468887753 2444555555555532   2221 1221                


Q ss_pred             ----CCHHHHHHHhhcCCCcEEEEcc
Q 022471          132 ----GDAKAVNKFFSENAFDAVMHFA  153 (296)
Q Consensus       132 ----~d~~~v~~~~~~~~~D~vi~~A  153 (296)
                          ...+++.+++...++|+|++..
T Consensus        76 ~~~~~g~~~l~~~~~~~~~D~vi~AI  101 (151)
T d1q0qa2          76 TEVLSGQQAACDMAALEDVDQVMAAI  101 (151)
T ss_dssp             CEEEESHHHHHHHHTCTTCCEEEECC
T ss_pred             cccccChHHHHHHhcCCCCCEEEEec
Confidence                1334555555545789998754

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.80  E-value=0.0084  Score=43.14  Aligned_cols=34  Identities=18%  Similarity=0.258  Sum_probs=31.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~  105 (296)
                      |+++|.|| |+||.++|..|.+.|.+|+++.|.++
T Consensus        23 k~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          23 GRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence            78999996 89999999999999999999988653

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.78  E-value=0.0066  Score=45.77  Aligned_cols=33  Identities=24%  Similarity=0.118  Sum_probs=28.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      .+|+|.|+ |.||...++.+...|++|+++++++
T Consensus        29 ~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~   61 (168)
T d1rjwa2          29 EWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGD   61 (168)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CEEEEeec-ccchhhhhHHHhcCCCeEeccCCCH
Confidence            78999875 9999999998888999999987544

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.73  E-value=0.022  Score=43.13  Aligned_cols=76  Identities=17%  Similarity=0.170  Sum_probs=46.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEc-cCC-CHHHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA-DLG-DAKAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dl~-d~~~v~~~~~~~~~D  147 (296)
                      .+|+|.|+ |++|...+..+...|. +|+++++++.+.    +.++++    +--+++.. +-. ..+.+.+.....++|
T Consensus        30 ~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl----~~a~~~----GAd~~in~~~~~~~~~~~~~~~~~~G~d  100 (175)
T d1cdoa2          30 STCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKF----EKAKVF----GATDFVNPNDHSEPISQVLSKMTNGGVD  100 (175)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH----HHHHHT----TCCEEECGGGCSSCHHHHHHHHHTSCBS
T ss_pred             CEEEEEec-CCccchHHHHHHHHhhchheeecchHHHH----HHHHHc----CCcEEEcCCCcchhHHHHHHhhccCCcc
Confidence            78999986 7788888888888877 577776544333    223333    11233321 111 124455555557899


Q ss_pred             EEEEcccc
Q 022471          148 AVMHFAAV  155 (296)
Q Consensus       148 ~vi~~Ag~  155 (296)
                      ++|.+.|.
T Consensus       101 ~vid~~G~  108 (175)
T d1cdoa2         101 FSLECVGN  108 (175)
T ss_dssp             EEEECSCC
T ss_pred             eeeeecCC
Confidence            99999984

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.72  E-value=0.011  Score=41.88  Aligned_cols=34  Identities=35%  Similarity=0.630  Sum_probs=30.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~  105 (296)
                      ++++|.|| |.+|.++|..|.+.|++|+++.+.++
T Consensus        22 ~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          22 QHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHhhcccceEEEeeecc
Confidence            78888885 99999999999999999999987553

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.71  E-value=0.036  Score=39.98  Aligned_cols=85  Identities=14%  Similarity=0.149  Sum_probs=55.1

Q ss_pred             cEEEEEcCC---ChhhHHHHHHHHhCC-CeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 022471           71 THVLVTGGA---GYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (296)
Q Consensus        71 k~vlVTGas---G~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (296)
                      ++|.|.|||   +..|..+.+.|.+.| .+|+.+-  +...+ .           ..... .-++.|.      -  ..+
T Consensus         9 ksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVn--P~~~~-i-----------~G~~~-y~sl~dl------p--~~v   65 (129)
T d2csua1           9 KGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVN--IKEEE-V-----------QGVKA-YKSVKDI------P--DEI   65 (129)
T ss_dssp             SEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEEC--SSCSE-E-----------TTEEC-BSSTTSC------S--SCC
T ss_pred             CeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEec--cCccc-c-----------CCeEe-ecchhhc------C--CCC
Confidence            899999999   899999999998766 5888774  22111 0           01111 1233332      1  468


Q ss_pred             cEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       147 D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      |.++-+..                  -..+..+++.+.+.+.+.++.+|+
T Consensus        66 Dlvvi~vp------------------~~~~~~~~~~~~~~g~~~~vi~s~   97 (129)
T d2csua1          66 DLAIIVVP------------------KRFVKDTLIQCGEKGVKGVVIITA   97 (129)
T ss_dssp             SEEEECSC------------------HHHHHHHHHHHHHHTCCEEEECCC
T ss_pred             ceEEEecC------------------hHHhHHHHHHHHHcCCCEEEEecc
Confidence            99886542                  122445778888889988888877

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.70  E-value=0.007  Score=43.39  Aligned_cols=34  Identities=26%  Similarity=0.522  Sum_probs=30.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~  105 (296)
                      ++++|.|| |++|.++|..|.+.|++|+++.+.+.
T Consensus        33 ~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          33 GEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             SEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence            78999985 99999999999999999999987543

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.57  E-value=0.0099  Score=47.43  Aligned_cols=33  Identities=36%  Similarity=0.513  Sum_probs=30.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      |+|+|.|| |-.|..+|..|+++|++|.+++|..
T Consensus         7 ~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           7 KRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            78999996 9999999999999999999999753

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=95.55  E-value=0.025  Score=42.70  Aligned_cols=101  Identities=18%  Similarity=0.208  Sum_probs=66.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      -+|+|.|| |-.|..-++.....|++|.++|.+....+    .++....  ..++.   -..+.+.+++.+  .+.|+||
T Consensus        33 a~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~----~l~~~~~--~~~~~---~~~~~~~l~~~~--~~aDivI  100 (168)
T d1pjca1          33 GKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLS----YLETLFG--SRVEL---LYSNSAEIETAV--AEADLLI  100 (168)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH----HHHHHHG--GGSEE---EECCHHHHHHHH--HTCSEEE
T ss_pred             cEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHH----HHHHhhc--cccee---ehhhhhhHHHhh--ccCcEEE
Confidence            68999996 99999999999999999999997544333    3333322  23333   346778888888  4689999


Q ss_pred             EcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      .+|-+...+..           ..-++..++.|++.  .-||=+|.
T Consensus       101 ~aalipG~~aP-----------~lIt~~mv~~Mk~G--SVIVDvai  133 (168)
T d1pjca1         101 GAVLVPGRRAP-----------ILVPASLVEQMRTG--SVIVDVAV  133 (168)
T ss_dssp             ECCCCTTSSCC-----------CCBCHHHHTTSCTT--CEEEETTC
T ss_pred             EeeecCCcccC-----------eeecHHHHhhcCCC--cEEEEeec
Confidence            99876543211           11245566666542  24555665

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=95.44  E-value=0.0029  Score=48.50  Aligned_cols=118  Identities=12%  Similarity=0.009  Sum_probs=65.3

Q ss_pred             cEEEEEcCCChhhHH--HHHHHHhC----CCeEEEEecCCCCcchhhhhhhhhCC-CCCceEEEEccCCCHHHHHHHhhc
Q 022471           71 THVLVTGGAGYIGSH--AALRLLKD----SYRVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSE  143 (296)
Q Consensus        71 k~vlVTGasG~IG~~--la~~L~~~----G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~  143 (296)
                      +||.|.|| |.+|..  +...|+..    +.+++++|.++.+.+.....+..... .+....+..  -+|   .++++  
T Consensus         3 mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~--~td---~~eaL--   74 (171)
T d1obba1           3 VKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEK--TMN---LDDVI--   74 (171)
T ss_dssp             CEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEE--ESC---HHHHH--
T ss_pred             cEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEE--eCC---hhhcc--
Confidence            78999996 777765  34445443    46999999876544333322222111 112222211  123   34455  


Q ss_pred             CCCcEEEEcccccCcCCCCcChH------------------------HHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          144 NAFDAVMHFAAVAYVGESTLDPL------------------------KYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~~~~~~~------------------------~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      .+.|+||+.+++........+..                        .....|+...+.+++.+++...+-++..-|
T Consensus        75 ~dad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~~i~~T  151 (171)
T d1obba1          75 IDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAA  151 (171)
T ss_dssp             TTCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             cCCCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeEEEEEC
Confidence            57899999988643221100000                        012347777888999999888665555444

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=95.40  E-value=0.019  Score=42.65  Aligned_cols=35  Identities=20%  Similarity=0.279  Sum_probs=28.5

Q ss_pred             cEEEEE-cCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 022471           71 THVLVT-GGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (296)
Q Consensus        71 k~vlVT-GasG~IG~~la~~L~~~G~~V~~~~r~~~  105 (296)
                      +.++|. .++|+||.++|..|++.|++|+++.+.+.
T Consensus        40 ~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          40 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            444444 46799999999999999999999987543

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=95.36  E-value=0.0099  Score=42.63  Aligned_cols=35  Identities=29%  Similarity=0.333  Sum_probs=31.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG  106 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~  106 (296)
                      ++++|.|| |.||.++|..|.+.|.+|+++.|.++-
T Consensus        26 ~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~   60 (123)
T d1dxla2          26 KKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEI   60 (123)
T ss_dssp             SEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcccc
Confidence            78999995 999999999999999999999876543

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.30  E-value=0.015  Score=50.91  Aligned_cols=77  Identities=18%  Similarity=0.313  Sum_probs=50.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcc-------------------hhhhhhhhhCCCCCceEEEEcc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNI-------------------GAVKVLQELFPEPGRLQFIYAD  130 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~D  130 (296)
                      .+|||.|+ ||||.++++.|+..|. ++.++|...-...                   .+.+.++++.+. .++..+..+
T Consensus        38 ~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~-v~i~~~~~~  115 (426)
T d1yovb1          38 CKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPN-CNVVPHFNK  115 (426)
T ss_dssp             CCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTT-CCCEEECSC
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCC-CceEeeecc
Confidence            68999997 8899999999999998 7888875322111                   112233333332 455666666


Q ss_pred             CCCHHHHHHHhhcCCCcEEEEcc
Q 022471          131 LGDAKAVNKFFSENAFDAVMHFA  153 (296)
Q Consensus       131 l~d~~~v~~~~~~~~~D~vi~~A  153 (296)
                      +.+..  ..++  .++|+||.+.
T Consensus       116 i~~~~--~~~~--~~~DlVi~~~  134 (426)
T d1yovb1         116 IQDFN--DTFY--RQFHIIVCGL  134 (426)
T ss_dssp             GGGBC--HHHH--TTCSEEEECC
T ss_pred             ccchH--HHHH--Hhcchheecc
Confidence            65533  2455  5689988764

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.29  E-value=0.0083  Score=44.78  Aligned_cols=34  Identities=15%  Similarity=0.154  Sum_probs=29.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~  105 (296)
                      |+|.+.| +|-+|+++++.|++.|++|++.+|+..
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~   34 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLE   34 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHH
T ss_pred             CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHH
Confidence            4677886 699999999999999999999886543

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.25  E-value=0.062  Score=41.07  Aligned_cols=36  Identities=22%  Similarity=0.090  Sum_probs=31.5

Q ss_pred             CCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        68 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      ..+|+|.|.|. |.||+.+++.+..-|.+|++.+|..
T Consensus        40 l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~   75 (181)
T d1qp8a1          40 IQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTP   75 (181)
T ss_dssp             CTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccCceEEEecc-ccccccceeeeeccccccccccccc
Confidence            34499999995 8899999999999999999998754

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.23  E-value=0.0086  Score=46.98  Aligned_cols=34  Identities=24%  Similarity=0.254  Sum_probs=30.1

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecC
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~  103 (296)
                      .+|+|+|-| .|.+|+++++.|.+.|++|++.+.+
T Consensus        26 ~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d   59 (201)
T d1c1da1          26 DGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTD   59 (201)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecch
Confidence            349999998 7999999999999999999988743

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=95.19  E-value=0.014  Score=43.65  Aligned_cols=25  Identities=24%  Similarity=0.356  Sum_probs=22.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY   95 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~   95 (296)
                      =+|.|.||||++|.++++.|.++.+
T Consensus         2 ~kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           2 YTVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHcCCC
Confidence            3799999999999999999988864

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=95.18  E-value=0.014  Score=42.44  Aligned_cols=35  Identities=37%  Similarity=0.647  Sum_probs=31.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG  106 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~  106 (296)
                      ++|+|.|| |++|.++|..|.+.|.+|+++.+.++-
T Consensus        36 k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~~   70 (133)
T d1q1ra2          36 NRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAARV   70 (133)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             CEEEEECC-chHHHHHHHHHHhhCcceeeeeecccc
Confidence            78999985 999999999999999999999876543

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=95.16  E-value=0.019  Score=44.16  Aligned_cols=31  Identities=23%  Similarity=0.484  Sum_probs=26.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEe
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVD  101 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~  101 (296)
                      .+|.|.||||..|.++++.|.++.+ ++..+.
T Consensus         6 ikVaIlGATGyvG~elirLL~~HP~~ei~~l~   37 (183)
T d2cvoa1           6 VRIAVLGASGYTGAEIVRLLANHPQFRIKVMT   37 (183)
T ss_dssp             EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             cEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence            6899999999999999999998754 666555

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.15  E-value=0.0051  Score=47.15  Aligned_cols=36  Identities=22%  Similarity=0.442  Sum_probs=30.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN  107 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~  107 (296)
                      |+|-|.| .|-+|..+++.|+++|++|.+++|+..+.
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~   37 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKS   37 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHH
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence            5687887 79999999999999999999998755443

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.14  E-value=0.016  Score=41.89  Aligned_cols=70  Identities=14%  Similarity=0.141  Sum_probs=47.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEE-ecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc---CCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIV-DNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NAF  146 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---~~~  146 (296)
                      |+|.|.|++|-+|+.+++.+.++|++++.. +++.   .+   .   +    .+.. +..|++.++.+.+.++.   .+.
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~---~~---~---~----~~~D-VvIDFS~p~~~~~~l~~~~~~~~   66 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNG---VE---E---L----DSPD-VVIDFSSPEALPKTVDLCKKYRA   66 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTE---EE---E---C----SCCS-EEEECSCGGGHHHHHHHHHHHTC
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCc---HH---H---h----ccCC-EEEEecCHHHHHHHHHHHHhcCC
Confidence            579999999999999999999999988754 3211   10   0   0    1122 35799998877666543   456


Q ss_pred             cEEEEccc
Q 022471          147 DAVMHFAA  154 (296)
Q Consensus       147 D~vi~~Ag  154 (296)
                      -+|+-..|
T Consensus        67 p~ViGTTG   74 (128)
T d1vm6a3          67 GLVLGTTA   74 (128)
T ss_dssp             EEEECCCS
T ss_pred             CEEEEcCC
Confidence            67775544

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.07  E-value=0.011  Score=43.81  Aligned_cols=34  Identities=24%  Similarity=0.508  Sum_probs=30.5

Q ss_pred             CCCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEec
Q 022471           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (296)
Q Consensus        67 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r  102 (296)
                      ..+ |+|||.|| |.+|..-++.|++.|++|++++.
T Consensus        11 l~g-krvLViGg-G~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          11 LKD-KRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             CTT-CEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             eCC-CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            445 99999998 88999999999999999999963

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.99  E-value=0.02  Score=40.96  Aligned_cols=32  Identities=25%  Similarity=0.244  Sum_probs=29.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~  103 (296)
                      ++++|.|| |.||.++|..|.+.|.+|+++.|+
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            67999995 999999999999999999999864

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=94.97  E-value=0.019  Score=41.31  Aligned_cols=33  Identities=24%  Similarity=0.421  Sum_probs=30.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      ++++|.|| |.||.++|..|.+.|.+|+++.+.+
T Consensus        27 ~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          27 GKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             SEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            78999995 9999999999999999999998754

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=94.96  E-value=0.065  Score=39.63  Aligned_cols=47  Identities=19%  Similarity=0.229  Sum_probs=34.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhC--CCeEEEEecCCCCcchhhhhhhhh
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQEL  117 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~  117 (296)
                      +|+|.|.|+||-||.....-+.+.  .++|+++.-. ++.+.+.+.+.+.
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~-~N~~~L~~q~~ef   50 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN-RNVKDLADAAKRT   50 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES-SCHHHHHHHHHHT
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeC-CCHHHHHHHHHhh
Confidence            389999999999999998888664  5788877532 3445555555554

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.94  E-value=0.024  Score=40.11  Aligned_cols=34  Identities=15%  Similarity=0.157  Sum_probs=30.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~  105 (296)
                      ++++|.|| |.||.++|..|++.|.+|.++.|.++
T Consensus        23 ~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          23 STVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            78999985 99999999999999999999987543

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.88  E-value=0.073  Score=40.18  Aligned_cols=35  Identities=26%  Similarity=0.322  Sum_probs=31.8

Q ss_pred             CCCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEec
Q 022471           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (296)
Q Consensus        67 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r  102 (296)
                      ..+ |+|+|.|.|.-+|+-++..|+++|+.|+++..
T Consensus        37 l~G-k~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~   71 (170)
T d1a4ia1          37 IAG-RHAVVVGRSKIVGAPMHDLLLWNNATVTTCHS   71 (170)
T ss_dssp             CTT-CEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred             ccc-ceEEEEecCCccchHHHHHHHhccCceEEEec
Confidence            344 99999999999999999999999999999864

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.87  E-value=0.023  Score=51.23  Aligned_cols=109  Identities=20%  Similarity=0.226  Sum_probs=63.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcc-------------------hhhhhhhhhCCCCCceEEEEcc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNI-------------------GAVKVLQELFPEPGRLQFIYAD  130 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~D  130 (296)
                      .+|+|.|+ |++|.++++.|+..|. +++++|...-...                   .+.+.+.++.+. .++.++..+
T Consensus        26 s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~-v~i~~~~~~  103 (529)
T d1yova1          26 AHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSD-VSGSFVEES  103 (529)
T ss_dssp             CEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTT-SBCCEESSC
T ss_pred             CCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCC-CcEEEEcCC
Confidence            68999996 8999999999999996 7888874321111                   112223333221 234444433


Q ss_pred             CCCHH-HHHHHhhcCCCcEEEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccccccc
Q 022471          131 LGDAK-AVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYG  201 (296)
Q Consensus       131 l~d~~-~v~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~~~g  201 (296)
                      +.+.. ....++  .++|+||.+..                 |......+-+.|++.+. .+|.+++.+.||
T Consensus       104 ~~~~~~~~~~~~--~~~dvVv~~~~-----------------~~~~~~~l~~~c~~~~i-p~i~~~~~G~~G  155 (529)
T d1yova1         104 PENLLDNDPSFF--CRFTVVVATQL-----------------PESTSLRLADVLWNSQI-PLLICRTYGLVG  155 (529)
T ss_dssp             HHHHHHSCGGGG--GGCSEEEEESC-----------------CHHHHHHHHHHHHHHTC-CEEEEEEETTEE
T ss_pred             chhhhhhHHHHh--cCCCEEEECCC-----------------CHHHHHHHHHHHHHcCC-CEEEEeccCCEE
Confidence            32210 011233  46899987642                 12223346677777775 588888877666

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.86  E-value=0.035  Score=42.50  Aligned_cols=35  Identities=26%  Similarity=0.295  Sum_probs=31.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~  105 (296)
                      .|+|+|.|| |..|.+.|..|+++||+|+++.+.+.
T Consensus        43 ~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          43 KKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            389999995 99999999999999999999987653

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.63  E-value=0.035  Score=43.16  Aligned_cols=35  Identities=23%  Similarity=0.081  Sum_probs=30.9

Q ss_pred             CCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecC
Q 022471           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (296)
Q Consensus        68 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~  103 (296)
                      ..+|+|.|.| .|.||+.+++.|..-|.+|++.++.
T Consensus        41 l~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~   75 (197)
T d1j4aa1          41 VRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIF   75 (197)
T ss_dssp             GGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             ccCCeEEEec-ccccchhHHHhHhhhcccccccCcc
Confidence            3449999999 6999999999999999999998754

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=94.63  E-value=0.0094  Score=44.38  Aligned_cols=35  Identities=29%  Similarity=0.460  Sum_probs=29.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRG  106 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~r~~~~  106 (296)
                      |+|.+.|+ |-+|.++++.|++.| ++|++.+|++.+
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~   36 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEK   36 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHH
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhH
Confidence            57888885 999999999999887 899999876533

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.59  E-value=0.019  Score=43.83  Aligned_cols=35  Identities=20%  Similarity=0.245  Sum_probs=30.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRG  106 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~  106 (296)
                      |||+|.|| |..|...|..|++.|+ +|+++.++..-
T Consensus         5 ~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~~   40 (196)
T d1gtea4           5 AKIALLGA-GPASISCASFLARLGYSDITIFEKQEYV   40 (196)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred             CEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCcc
Confidence            89999996 9999999999999998 59999876543

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=94.54  E-value=0.015  Score=47.06  Aligned_cols=31  Identities=32%  Similarity=0.513  Sum_probs=28.5

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        73 vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      |+|.|| |-+|..+|.+|+++|++|+++++..
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            899995 9999999999999999999998753

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=94.53  E-value=0.056  Score=38.70  Aligned_cols=74  Identities=22%  Similarity=0.277  Sum_probs=52.6

Q ss_pred             cEEEEEcCCC----------hhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHH
Q 022471           71 THVLVTGGAG----------YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF  140 (296)
Q Consensus        71 k~vlVTGasG----------~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~  140 (296)
                      |+|||.|+..          .-+.+.+++|.+.|++++++..++..-..-.+          -..-+..+--..+++.++
T Consensus         8 kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d----------~aD~lYfePlt~e~v~~I   77 (127)
T d1a9xa3           8 KSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPE----------MADATYIEPIHWEVVRKI   77 (127)
T ss_dssp             CEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGG----------GSSEEECSCCCHHHHHHH
T ss_pred             CEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChh----------hcceeeeecCCHHHHHHH
Confidence            8999999843          56888999999999999998765543221111          112233455667888998


Q ss_pred             hhcCCCcEEEEccc
Q 022471          141 FSENAFDAVMHFAA  154 (296)
Q Consensus       141 ~~~~~~D~vi~~Ag  154 (296)
                      ++..++|.|+-..|
T Consensus        78 i~~E~pd~il~~~G   91 (127)
T d1a9xa3          78 IEKERPDAVLPTMG   91 (127)
T ss_dssp             HHHHCCSEEECSSS
T ss_pred             HHHhCcCCeEEEee
Confidence            88889999986655

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=94.35  E-value=0.11  Score=42.69  Aligned_cols=31  Identities=23%  Similarity=0.245  Sum_probs=28.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEe
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVD  101 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~  101 (296)
                      +++|+|-| .|-+|+++|+.|.+.|++|+.++
T Consensus        36 gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          36 DKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEE
Confidence            38999999 59999999999999999998875

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.34  E-value=0.023  Score=45.88  Aligned_cols=33  Identities=30%  Similarity=0.382  Sum_probs=30.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      |+|+|.|| |.-|...|.+|+++|++|+++.+++
T Consensus         2 KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           2 KRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            88999995 9999999999999999999998654

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=94.28  E-value=0.14  Score=34.11  Aligned_cols=69  Identities=22%  Similarity=0.173  Sum_probs=43.8

Q ss_pred             cEEEEEcCCChhh-HHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIG-SHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG-~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      |+|-+.|- ||+| +.||+.|+++|++|...|+...   +..+.+++.     .+.+..+  .+.+.+      .+.|+|
T Consensus         2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~---~~t~~L~~~-----Gi~i~~g--h~~~~i------~~~d~v   64 (89)
T d1j6ua1           2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEET---ERTAYLRKL-----GIPIFVP--HSADNW------YDPDLV   64 (89)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCC---HHHHHHHHT-----TCCEESS--CCTTSC------CCCSEE
T ss_pred             cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCC---hhHHHHHHC-----CCeEEee--eccccc------CCCCEE
Confidence            67888875 5555 4799999999999999986532   223334443     2333322  122111      368999


Q ss_pred             EEccccc
Q 022471          150 MHFAAVA  156 (296)
Q Consensus       150 i~~Ag~~  156 (296)
                      |...++.
T Consensus        65 V~SsAI~   71 (89)
T d1j6ua1          65 IKTPAVR   71 (89)
T ss_dssp             EECTTCC
T ss_pred             EEecCcC
Confidence            9988874

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=94.20  E-value=0.34  Score=32.60  Aligned_cols=71  Identities=18%  Similarity=0.182  Sum_probs=45.7

Q ss_pred             CccEEEEEcCCChhh-HHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           69 GVTHVLVTGGAGYIG-SHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        69 ~~k~vlVTGasG~IG-~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      ..|++.+.|- ||+| ++||+.|+++|++|...|+...   ...+.+.+.     .+.+...+-.  +.    +  .+.|
T Consensus         7 ~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~---~~~~~L~~~-----Gi~v~~g~~~--~~----i--~~~d   69 (96)
T d1p3da1           7 RVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADG---VVTQRLAQA-----GAKIYIGHAE--EH----I--EGAS   69 (96)
T ss_dssp             TCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCS---HHHHHHHHT-----TCEEEESCCG--GG----G--TTCS
T ss_pred             hCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCC---hhhhHHHHC-----CCeEEECCcc--cc----C--CCCC
Confidence            3488999995 6666 7789999999999999996532   222233322     2333333322  11    2  3679


Q ss_pred             EEEEccccc
Q 022471          148 AVMHFAAVA  156 (296)
Q Consensus       148 ~vi~~Ag~~  156 (296)
                      .||...++.
T Consensus        70 ~vV~S~AI~   78 (96)
T d1p3da1          70 VVVVSSAIK   78 (96)
T ss_dssp             EEEECTTSC
T ss_pred             EEEECCCcC
Confidence            999888764

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.20  E-value=0.023  Score=42.68  Aligned_cols=35  Identities=26%  Similarity=0.199  Sum_probs=31.3

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      .+|+|+|.| .|-||+.+|+.|...|++|++.+..+
T Consensus        23 ~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp   57 (163)
T d1li4a1          23 AGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDP   57 (163)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             cCCEEEEec-cccccHHHHHHHHhCCCeeEeeeccc
Confidence            449999999 79999999999999999999998644

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=93.96  E-value=0.027  Score=41.71  Aligned_cols=34  Identities=21%  Similarity=0.086  Sum_probs=28.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~  105 (296)
                      |+|-|.| .|-+|+.+++.|+++|++|++.++...
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~   34 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRS   34 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCC
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchh
Confidence            4677886 699999999999999999998875443

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=93.93  E-value=0.14  Score=38.97  Aligned_cols=40  Identities=23%  Similarity=0.105  Sum_probs=33.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhh
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAV  111 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~  111 (296)
                      -+|+|.|| |-.|..-++-....|++|.++|.+....+...
T Consensus        30 a~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~   69 (183)
T d1l7da1          30 ARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE   69 (183)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH
T ss_pred             cEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHH
Confidence            48999996 99999999999999999999997766554433

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=93.91  E-value=0.034  Score=44.39  Aligned_cols=33  Identities=27%  Similarity=0.365  Sum_probs=30.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      +||+|.|| |.-|..+|..|+++|++|+++.|++
T Consensus         5 ~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           5 DRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            78999996 9999999999999999999998754

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.81  E-value=0.061  Score=42.54  Aligned_cols=35  Identities=34%  Similarity=0.539  Sum_probs=31.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~  105 (296)
                      .|+|+|.|| |..|...|.+|+++|++|+++.+..+
T Consensus        49 ~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          49 KDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence            389999996 99999999999999999999986543

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=93.81  E-value=0.038  Score=46.16  Aligned_cols=35  Identities=23%  Similarity=0.480  Sum_probs=31.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~  105 (296)
                      +|+|+|.|| |.-|..+|..|+++|++|.++.++..
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            389999995 99999999999999999999986554

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=93.56  E-value=0.34  Score=34.06  Aligned_cols=74  Identities=19%  Similarity=0.214  Sum_probs=51.6

Q ss_pred             cEEEEEcCCC----------hhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHH
Q 022471           71 THVLVTGGAG----------YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF  140 (296)
Q Consensus        71 k~vlVTGasG----------~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~  140 (296)
                      |+|||.|+..          .-+.+.+++|.+.|++++++..++..-..-.          .-..-+..+--..+.+.++
T Consensus         5 kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~----------d~aD~lYfeplt~e~v~~I   74 (121)
T d1a9xa4           5 EKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDY----------DTSDRLYFEPVTLEDVLEI   74 (121)
T ss_dssp             CEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTST----------TSSSEEECCCCSHHHHHHH
T ss_pred             CEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcCh----------hhcCceEEccCCHHHHHHH
Confidence            7899999854          5688999999999999999876654322111          1122223444567888888


Q ss_pred             hhcCCCcEEEEccc
Q 022471          141 FSENAFDAVMHFAA  154 (296)
Q Consensus       141 ~~~~~~D~vi~~Ag  154 (296)
                      ++..++|.|+-..|
T Consensus        75 i~~E~p~~ii~~~G   88 (121)
T d1a9xa4          75 VRIEKPKGVIVQYG   88 (121)
T ss_dssp             HHHHCCSEEECSSS
T ss_pred             HHHhCCCEEEeehh
Confidence            87778998886554

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.50  E-value=0.077  Score=40.00  Aligned_cols=120  Identities=14%  Similarity=0.074  Sum_probs=63.5

Q ss_pred             cEEEEEcC-CChhhHHHHHHHHhCC----CeEEEEecCCCCc-chhhhhhh-hhCCCCCceEEEEccCCCHHHHHHHhhc
Q 022471           71 THVLVTGG-AGYIGSHAALRLLKDS----YRVTIVDNLSRGN-IGAVKVLQ-ELFPEPGRLQFIYADLGDAKAVNKFFSE  143 (296)
Q Consensus        71 k~vlVTGa-sG~IG~~la~~L~~~G----~~V~~~~r~~~~~-~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~v~~~~~~  143 (296)
                      +||.|.|| +.+.+..++..++...    -++++.|.++... .+..+... .... ..+.......-+|.   .+.+  
T Consensus         2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~-~~~~~~~~~~~td~---~~al--   75 (169)
T d1s6ya1           2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVE-KAGVPIEIHLTLDR---RRAL--   75 (169)
T ss_dssp             EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHH-HTTCCCEEEEESCH---HHHH--
T ss_pred             cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHH-hcCCCceeeecCCc---hhhc--
Confidence            67888887 4455666665555432    3888888654321 11111111 1100 01111112222443   3334  


Q ss_pred             CCCcEEEEcccccCcCCC---------------C-cCh--HHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          144 NAFDAVMHFAAVAYVGES---------------T-LDP--LKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~~---------------~-~~~--~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      .+.|+||+.|+....+..               + ..+  ......|+...+.+++.+.+....-++.+-|
T Consensus        76 ~gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~vt  146 (169)
T d1s6ya1          76 DGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFT  146 (169)
T ss_dssp             TTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CCCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEEeC
Confidence            578999999997532110               0 000  1123467777888999999988776666655

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.41  E-value=0.071  Score=43.96  Aligned_cols=27  Identities=22%  Similarity=0.247  Sum_probs=23.7

Q ss_pred             cCCChhhHHHHHHHHhCCCeEEEEecC
Q 022471           77 GGAGYIGSHAALRLLKDSYRVTIVDNL  103 (296)
Q Consensus        77 GasG~IG~~la~~L~~~G~~V~~~~r~  103 (296)
                      -.||-.|.+||++|+.+|++|+++.+.
T Consensus        43 ~SSGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          43 FSSGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CCchHHHHHHHHHHHHcCCEEEEEecC
Confidence            347899999999999999999998653

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=93.38  E-value=0.013  Score=44.51  Aligned_cols=116  Identities=16%  Similarity=0.174  Sum_probs=60.7

Q ss_pred             cEEEEEcCCChhhHH-HHHHHHhC-----CCeEEEEecCCCCcchhhhhhhhhCCC-CCceEEEEccCCCHHHHHHHhhc
Q 022471           71 THVLVTGGAGYIGSH-AALRLLKD-----SYRVTIVDNLSRGNIGAVKVLQELFPE-PGRLQFIYADLGDAKAVNKFFSE  143 (296)
Q Consensus        71 k~vlVTGasG~IG~~-la~~L~~~-----G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~  143 (296)
                      .||.|.||++ +|.. ++..++..     +.++++.|.++.+.+...+.++..... +........  +|   .++++  
T Consensus         4 ~KI~iIGaGs-v~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d---~~eal--   75 (167)
T d1u8xx1           4 FSIVIAGGGS-TFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TD---PEEAF--   75 (167)
T ss_dssp             EEEEEECTTS-SSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SC---HHHHH--
T ss_pred             ceEEEECCCh-hhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CC---hhhcc--
Confidence            5788889855 4544 44455542     248999997665544333333222100 112222111  12   34445  


Q ss_pred             CCCcEEEEcccccCcCCCCcChHHH--------------------HHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          144 NAFDAVMHFAAVAYVGESTLDPLKY--------------------YHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       144 ~~~D~vi~~Ag~~~~~~~~~~~~~~--------------------~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      .+.|+||+.||....+..  ...+.                    ...|+.-.+.+++.+++....-++..-|
T Consensus        76 ~~AD~Vvitag~~~~~g~--~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P~A~li~~T  146 (167)
T d1u8xx1          76 TDVDFVMAHIRVGKYAMR--ALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYS  146 (167)
T ss_dssp             SSCSEEEECCCTTHHHHH--HHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CCCCEEEECCCcCCCCce--eHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            578999999997433210  11111                    1234555677888888887655554444

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=93.27  E-value=0.079  Score=34.44  Aligned_cols=34  Identities=21%  Similarity=0.050  Sum_probs=30.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      ||+|.|.|| |.+|+-++.+-.+-|.+|++++..+
T Consensus         1 ~k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~   34 (78)
T d3etja2           1 MKQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDA   34 (78)
T ss_dssp             CEEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTS
T ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCC
Confidence            589999995 9999999999999999999998543

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=93.05  E-value=0.047  Score=41.06  Aligned_cols=35  Identities=20%  Similarity=0.370  Sum_probs=31.5

Q ss_pred             CCCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEec
Q 022471           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (296)
Q Consensus        67 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r  102 (296)
                      ..+ |+|+|.|.|.-+|+-++..|.++|+.|+++..
T Consensus        35 l~G-K~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~   69 (166)
T d1b0aa1          35 TFG-LNAVVIGASNIVGRPMSMELLLAGCTTTVTHR   69 (166)
T ss_dssp             CTT-CEEEEECCCTTTHHHHHHHHHTTTCEEEEECS
T ss_pred             ccc-ceEEEEeccccccHHHHHHHHHhhcccccccc
Confidence            344 99999999999999999999999999998853

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=93.03  E-value=0.055  Score=40.29  Aligned_cols=34  Identities=29%  Similarity=0.350  Sum_probs=29.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLS  104 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~r~~  104 (296)
                      +|+|+|.|| |.+|.++|..|.+.+.  +|+++.+.+
T Consensus         2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            389999996 9999999999999875  788887654

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=93.02  E-value=0.041  Score=44.25  Aligned_cols=33  Identities=24%  Similarity=0.360  Sum_probs=29.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      |+|+|.|| |.-|...|..|+++|++|+++.+++
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            56999996 9999999999999999999997654

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.98  E-value=0.094  Score=40.10  Aligned_cols=35  Identities=29%  Similarity=0.152  Sum_probs=30.3

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      .+|++.|.| .|.||+++++.+..-|.+|+..++..
T Consensus        43 ~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~   77 (184)
T d1ygya1          43 FGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYV   77 (184)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTS
T ss_pred             cceeeeecc-ccchhHHHHHHhhhccceEEeecCCC
Confidence            348899988 69999999999999999999988644

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=92.91  E-value=0.051  Score=41.77  Aligned_cols=35  Identities=26%  Similarity=0.210  Sum_probs=30.8

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      .++++.|.| .|.||+++++.|..-|.+|...++..
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d2naca1          43 EAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHR   77 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred             cccceeecc-ccccchhhhhhhhccCceEEEEeecc
Confidence            348999999 69999999999999999999998754

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=92.81  E-value=0.47  Score=36.03  Aligned_cols=35  Identities=17%  Similarity=0.099  Sum_probs=30.5

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      .+++|.|.| .|.||+.+++.+..-|.+|+..++..
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d1sc6a1          43 RGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIEN   77 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cceEEEEee-cccchhhhhhhcccccceEeeccccc
Confidence            348999997 79999999999999999999998643

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=92.72  E-value=0.066  Score=43.82  Aligned_cols=33  Identities=30%  Similarity=0.472  Sum_probs=30.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      |+|+|.|| |--|...|..|+++|++|+++.+.+
T Consensus        31 kkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          31 KHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             CEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            79999995 9999999999999999999998654

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=92.67  E-value=0.3  Score=36.29  Aligned_cols=30  Identities=17%  Similarity=0.262  Sum_probs=25.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhC-CCeEEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIV  100 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~-G~~V~~~  100 (296)
                      .+|.|.|++|-+|+++++.+.+. +.+++..
T Consensus         5 ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~   35 (162)
T d1diha1           5 IRVAIAGAGGRMGRQLIQAALALEGVQLGAA   35 (162)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEE
Confidence            78999999999999999999886 6676543

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=92.66  E-value=0.023  Score=45.36  Aligned_cols=33  Identities=18%  Similarity=0.222  Sum_probs=29.7

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~  103 (296)
                      +++|+|-| -|-+|+++++.|.+.|++|++.+.+
T Consensus        39 g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~   71 (230)
T d1leha1          39 GLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVN   71 (230)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCEEEeeccc
Confidence            49999998 6999999999999999999988743

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=92.52  E-value=0.36  Score=38.39  Aligned_cols=31  Identities=29%  Similarity=0.337  Sum_probs=28.4

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEe
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVD  101 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~  101 (296)
                      +++|+|-| .|-+|+++++.|.+.|++|+.++
T Consensus        31 g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          31 GKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            38999998 79999999999999999998776

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.46  E-value=0.046  Score=44.46  Aligned_cols=32  Identities=22%  Similarity=0.249  Sum_probs=28.9

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      +|+|.|| |-.|..+|..|.+.|++|.++.+.+
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            5999997 7999999999999999999998654

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=92.26  E-value=0.066  Score=44.15  Aligned_cols=35  Identities=20%  Similarity=0.375  Sum_probs=30.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~  105 (296)
                      |..|+|.|| |.-|..+|+.|++.|++|.++.+++.
T Consensus         1 M~dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~~   35 (298)
T d1i8ta1           1 MYDYIIVGS-GLFGAVCANELKKLNKKVLVIEKRNH   35 (298)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred             CccEEEECC-cHHHHHHHHHHHhCCCcEEEEECCCC
Confidence            567999995 99999999999999999999976543

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=92.24  E-value=0.095  Score=40.44  Aligned_cols=36  Identities=22%  Similarity=0.227  Sum_probs=31.3

Q ss_pred             CCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        68 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      ..+|++.|.| .|.||+.+++.|..-|.+|+..++..
T Consensus        47 L~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~   82 (193)
T d1mx3a1          47 IRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYL   82 (193)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTS
T ss_pred             eeCceEEEec-cccccccceeeeeccccceeeccCcc
Confidence            3449999998 69999999999999999999998654

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=92.23  E-value=0.045  Score=41.52  Aligned_cols=77  Identities=16%  Similarity=-0.016  Sum_probs=49.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCC----------CCCceEEEEccCCCHHHHHHH
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP----------EPGRLQFIYADLGDAKAVNKF  140 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~----------~~~~~~~~~~Dl~d~~~v~~~  140 (296)
                      ++||..|.+.|   ..+..|+++|++|+++|.++...+.+.+..+....          ......++.+|..+...... 
T Consensus        22 ~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~-   97 (201)
T d1pjza_          22 ARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDI-   97 (201)
T ss_dssp             CEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHH-
T ss_pred             CEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccccccc-
Confidence            79999997655   36778999999999999765444433333321100          12345778888887654333 


Q ss_pred             hhcCCCcEEEEccc
Q 022471          141 FSENAFDAVMHFAA  154 (296)
Q Consensus       141 ~~~~~~D~vi~~Ag  154 (296)
                         ..+|.|+....
T Consensus        98 ---~~~D~i~~~~~  108 (201)
T d1pjza_          98 ---GHCAAFYDRAA  108 (201)
T ss_dssp             ---HSEEEEEEESC
T ss_pred             ---cceeEEEEEee
Confidence               35688776544

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=92.17  E-value=0.32  Score=35.13  Aligned_cols=31  Identities=19%  Similarity=0.248  Sum_probs=28.5

Q ss_pred             cEEEEEcCC---ChhhHHHHHHHHhCCCeEEEEe
Q 022471           71 THVLVTGGA---GYIGSHAALRLLKDSYRVTIVD  101 (296)
Q Consensus        71 k~vlVTGas---G~IG~~la~~L~~~G~~V~~~~  101 (296)
                      |+|.|.|||   +-.|..+++.|.+.|++|+.+-
T Consensus        20 ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVn   53 (139)
T d2d59a1          20 KKIALVGASPKPERDANIVMKYLLEHGYDVYPVN   53 (139)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEEC
T ss_pred             CeEEEEeecCCCCCchHHHHHHHHHCCCEEEEEC
Confidence            789999999   6899999999999999988774

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.10  E-value=0.21  Score=36.02  Aligned_cols=72  Identities=18%  Similarity=0.171  Sum_probs=44.9

Q ss_pred             EEEEEcCCChhhHHHHHHHHhC-CCeEEEE-ecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc---CCC
Q 022471           72 HVLVTGGAGYIGSHAALRLLKD-SYRVTIV-DNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NAF  146 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~-G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---~~~  146 (296)
                      ||.|.|++|-+|+.+++.+.+. +++++.. ++. ....   . +.   .  .+.. +..|++.++.+.+.++.   .++
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~-~~~~---~-~~---~--~~~D-vvIDFS~p~~~~~~~~~~~~~~~   69 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAG-DPLS---L-LT---D--GNTE-VVIDFTHPDVVMGNLEFLIDNGI   69 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTT-CCTH---H-HH---T--TTCS-EEEECCCTTTHHHHHHHHHHTTC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecC-Cchh---h-hc---c--ccCC-EEEEcccHHHHHHHHHHHHhcCC
Confidence            6899999999999999988775 6676653 321 1111   1 11   1  1122 35799988766555433   567


Q ss_pred             cEEEEccc
Q 022471          147 DAVMHFAA  154 (296)
Q Consensus       147 D~vi~~Ag  154 (296)
                      -+|+-..|
T Consensus        70 ~~ViGTTG   77 (135)
T d1yl7a1          70 HAVVGTTG   77 (135)
T ss_dssp             EEEECCCC
T ss_pred             CEEEeccc
Confidence            77774444

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=91.57  E-value=0.32  Score=37.55  Aligned_cols=77  Identities=12%  Similarity=0.130  Sum_probs=44.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEe-cCCCCc-----chhhhhhhhhCCCCCceEEEE-ccCCCHHHHHHHhhc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVD-NLSRGN-----IGAVKVLQELFPEPGRLQFIY-ADLGDAKAVNKFFSE  143 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~-r~~~~~-----~~~~~~~~~~~~~~~~~~~~~-~Dl~d~~~v~~~~~~  143 (296)
                      |+|++.| ++..|..+.+.|.+.|++|..+. +...+.     ....+.+++     .++.++. -|+.+.+.+ +.+.+
T Consensus         1 Mkiv~~~-~~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~-----~~i~~~~~~~~~~~~~~-~~i~~   73 (203)
T d2blna2           1 MKTVVFA-YHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAE-----RGIPVYAPDNVNHPLWV-ERIAQ   73 (203)
T ss_dssp             CEEEEEE-CHHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHH-----HTCCEECCSCCCSHHHH-HHHHH
T ss_pred             CeEEEEe-cCHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHH-----cCCcceecccccchhhh-hhhhh
Confidence            4667775 57789999999999999987654 222111     111222222     2344433 456565544 44555


Q ss_pred             CCCcEEEEccc
Q 022471          144 NAFDAVMHFAA  154 (296)
Q Consensus       144 ~~~D~vi~~Ag  154 (296)
                      .++|++|....
T Consensus        74 ~~~Dlii~~g~   84 (203)
T d2blna2          74 LSPDVIFSFYY   84 (203)
T ss_dssp             TCCSEEEEESC
T ss_pred             hcccceeeeec
Confidence            68999887653

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.54  E-value=0.097  Score=40.54  Aligned_cols=32  Identities=25%  Similarity=0.263  Sum_probs=28.8

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 022471           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (296)
Q Consensus        73 vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~  105 (296)
                      |+|.| +|.-|...|..|+++|++|.++.+++.
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~~   39 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQDH   39 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence            89999 599999999999999999999987653

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=91.54  E-value=0.095  Score=42.25  Aligned_cols=31  Identities=32%  Similarity=0.575  Sum_probs=28.1

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        73 vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      |+|.|| |-.|..+|.+|+++|++|+++++..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            888985 9999999999999999999998753

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=91.52  E-value=0.12  Score=43.07  Aligned_cols=35  Identities=23%  Similarity=0.358  Sum_probs=30.2

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCC
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLS  104 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~r~~  104 (296)
                      .+|+|+|.|| |--|..+|..|+++|  ++|+++.|+.
T Consensus         3 ~~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           3 TIRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            4689999996 999999999999887  5999998764

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=91.51  E-value=0.31  Score=37.24  Aligned_cols=37  Identities=19%  Similarity=0.118  Sum_probs=31.4

Q ss_pred             CCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 022471           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (296)
Q Consensus        68 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~  105 (296)
                      ..++++.|.| .|.||+.+++.+..-|.+|...++...
T Consensus        45 l~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   81 (191)
T d1gdha1          45 LDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRA   81 (191)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             ecccceEEee-cccchHHHHHHHHhhcccccccccccc
Confidence            3449999999 599999999999999999999886443

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=91.47  E-value=0.15  Score=35.55  Aligned_cols=34  Identities=26%  Similarity=0.266  Sum_probs=27.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHH---hCCCeEEEEecCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLL---KDSYRVTIVDNLSR  105 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~---~~G~~V~~~~r~~~  105 (296)
                      ++++|.|| |++|.++|..|.   .+|.+|+++.+.++
T Consensus        21 ~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          21 RRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             SEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             CeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            78999997 999999996555   45678999987543

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=91.30  E-value=0.26  Score=34.20  Aligned_cols=34  Identities=24%  Similarity=0.228  Sum_probs=27.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHh---CCCeEEEEecCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLK---DSYRVTIVDNLSR  105 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~---~G~~V~~~~r~~~  105 (296)
                      ++++|.|| |.+|-++|..|.+   .|.+|.++.|.++
T Consensus        19 ~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~   55 (117)
T d1feca2          19 KRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDM   55 (117)
T ss_dssp             SEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred             CeEEEECC-ChHHHHHHHHhHhhcccccccceeccccc
Confidence            78999996 9999999976554   4889999987653

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=91.30  E-value=0.13  Score=39.50  Aligned_cols=82  Identities=17%  Similarity=0.073  Sum_probs=58.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      ..+=+|-|+||.-.++++.+ . +.+|+++|+++...+.+.+.++..   +.++.++.++..+...+..-.....+|.|+
T Consensus        26 ~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~---~~r~~~~~~~f~~~~~~~~~~~~~~vdgIl  100 (192)
T d1m6ya2          26 IILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEF---SDRVSLFKVSYREADFLLKTLGIEKVDGIL  100 (192)
T ss_dssp             EEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGG---TTTEEEEECCGGGHHHHHHHTTCSCEEEEE
T ss_pred             EEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccc---cccccchhHHHhhHHHHHHHcCCCCcceee
Confidence            34556778888888887776 3 468999998765555444444433   357999999998877665554446899999


Q ss_pred             EcccccC
Q 022471          151 HFAAVAY  157 (296)
Q Consensus       151 ~~Ag~~~  157 (296)
                      .-.|++.
T Consensus       101 ~DlGvSs  107 (192)
T d1m6ya2         101 MDLGVST  107 (192)
T ss_dssp             EECSCCH
T ss_pred             eccchhH
Confidence            8888754

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.21  E-value=0.15  Score=41.43  Aligned_cols=33  Identities=27%  Similarity=0.363  Sum_probs=29.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      ++|+|.|| |.-|...|..|+++|++|+++-.+.
T Consensus         6 ~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~   38 (449)
T d2dw4a2           6 GKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARD   38 (449)
T ss_dssp             CEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            67999995 9999999999999999999986443

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=90.88  E-value=0.1  Score=42.55  Aligned_cols=32  Identities=22%  Similarity=0.556  Sum_probs=28.2

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCC
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS  104 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~  104 (296)
                      +|+|.|| |-+|..+|.+|+++|. +|++++++.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            5899996 8999999999999996 699998763

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=90.75  E-value=0.11  Score=41.87  Aligned_cols=35  Identities=20%  Similarity=0.255  Sum_probs=29.9

Q ss_pred             ccEEEEEcCCChhhHHH-----HHHHHhCCCeEEEEecCCC
Q 022471           70 VTHVLVTGGAGYIGSHA-----ALRLLKDSYRVTIVDNLSR  105 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~l-----a~~L~~~G~~V~~~~r~~~  105 (296)
                      ||+|.|+| -||+|+..     +..|++.|++|.++|-++.
T Consensus         1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CCEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            68899998 99999864     5688999999999997654

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=90.75  E-value=0.13  Score=38.49  Aligned_cols=31  Identities=23%  Similarity=0.325  Sum_probs=26.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEec
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r  102 (296)
                      ++|+|.|| |.+|.++|.+|.+.|++|.++.+
T Consensus         4 ~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~   34 (185)
T d1q1ra1           4 DNVVIVGT-GLAGVEVAFGLRASGWEGNIRLV   34 (185)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             CCEEEECC-cHHHHHHHHHHHHcCCceEEEEe
Confidence            78999985 99999999999999987666543

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=90.73  E-value=0.063  Score=41.29  Aligned_cols=32  Identities=38%  Similarity=0.555  Sum_probs=26.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      |+|.|.| .|++|..+|..| ++|++|+++|.++
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~   32 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILP   32 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCH
Confidence            5688886 799999999766 4799999998654

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=90.70  E-value=0.69  Score=32.12  Aligned_cols=31  Identities=19%  Similarity=0.329  Sum_probs=27.4

Q ss_pred             cEEEEEcCC---ChhhHHHHHHHHhCCCeEEEEe
Q 022471           71 THVLVTGGA---GYIGSHAALRLLKDSYRVTIVD  101 (296)
Q Consensus        71 k~vlVTGas---G~IG~~la~~L~~~G~~V~~~~  101 (296)
                      |+|.|.|+|   +-.|..+.+.|.+.|++|+.+-
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVn   35 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVN   35 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEEC
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEc
Confidence            789999998   5689999999999999988763

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=90.51  E-value=0.25  Score=38.10  Aligned_cols=36  Identities=28%  Similarity=0.204  Sum_probs=31.5

Q ss_pred             CCccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        68 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      ..+|+|.|.| .|.||+.+++.|..-|.+|++.++..
T Consensus        43 l~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~   78 (199)
T d1dxya1          43 LGQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYP   78 (199)
T ss_dssp             GGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccceeeeeee-cccccccccccccccceeeeccCCcc
Confidence            3449999999 59999999999999999999998754

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.46  E-value=0.78  Score=36.25  Aligned_cols=31  Identities=23%  Similarity=0.256  Sum_probs=26.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhC-CCeEEEEe
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVD  101 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~  101 (296)
                      +++|+|-|- |-+|+++++.|+++ |+.|+.+.
T Consensus        32 g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vs   63 (239)
T d1gtma1          32 GKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVS   63 (239)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHhcCcceeecc
Confidence            389999995 99999999999864 99988765

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=90.43  E-value=0.74  Score=33.51  Aligned_cols=32  Identities=19%  Similarity=0.140  Sum_probs=25.0

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~  105 (296)
                      ||-+.| .|-+|+.+++.|++.|+.++ ..|...
T Consensus         2 kIg~IG-lG~MG~~ma~~L~~~g~~~~-~~~~~~   33 (156)
T d2cvza2           2 KVAFIG-LGAMGYPMAGHLARRFPTLV-WNRTFE   33 (156)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHTTSCEEE-ECSSTH
T ss_pred             eEEEEe-HHHHHHHHHHHHHhCCCEEE-EeCCHH
Confidence            477788 49999999999999998764 555443

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=90.40  E-value=0.14  Score=39.99  Aligned_cols=36  Identities=31%  Similarity=0.317  Sum_probs=30.7

Q ss_pred             ccEEEEEcCCChhhHH-----HHHHHHhCCCeEEEEecCCC
Q 022471           70 VTHVLVTGGAGYIGSH-----AALRLLKDSYRVTIVDNLSR  105 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~-----la~~L~~~G~~V~~~~r~~~  105 (296)
                      ||.|.|+++.||+|+.     +|..|+++|.+|.++|-+..
T Consensus         1 ~kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~~   41 (232)
T d1hyqa_           1 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADIT   41 (232)
T ss_dssp             CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred             CEEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            6899999999999985     57788899999999986543

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=90.29  E-value=0.42  Score=38.29  Aligned_cols=31  Identities=19%  Similarity=0.191  Sum_probs=28.2

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEe
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVD  101 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~  101 (296)
                      +++|+|-| .|-+|+++++.|.+.|++|+.++
T Consensus        36 g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          36 GKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             TCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            38999999 69999999999999999998764

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=90.11  E-value=0.17  Score=40.80  Aligned_cols=36  Identities=19%  Similarity=0.313  Sum_probs=30.8

Q ss_pred             ccEEEEEcCCChhhHHH-----HHHHHhCCCeEEEEecCCC
Q 022471           70 VTHVLVTGGAGYIGSHA-----ALRLLKDSYRVTIVDNLSR  105 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~l-----a~~L~~~G~~V~~~~r~~~  105 (296)
                      +.+|+|+.|-||+|+..     +..|+++|++|.++|-++.
T Consensus        19 ~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          19 EHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             SCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            37888888899999976     7899999999999997654

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=89.96  E-value=0.12  Score=41.08  Aligned_cols=73  Identities=11%  Similarity=-0.014  Sum_probs=50.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      ++||=.|++.|.   ++..|+++|.+|+++|.++.-.+.+.+.+..   .+.++.++.+|+.+.+     + ...+|+|+
T Consensus        39 ~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~---~~~~v~~~~~d~~~~~-----~-~~~fD~i~  106 (246)
T d1y8ca_          39 DDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRS---QGLKPRLACQDISNLN-----I-NRKFDLIT  106 (246)
T ss_dssp             TEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHH---TTCCCEEECCCGGGCC-----C-SCCEEEEE
T ss_pred             CeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccc---cCccceeeccchhhhc-----c-cccccccc
Confidence            789999987764   6788999999999998654433333333322   2357889999987653     1 25789998


Q ss_pred             Ecccc
Q 022471          151 HFAAV  155 (296)
Q Consensus       151 ~~Ag~  155 (296)
                      ...+.
T Consensus       107 ~~~~~  111 (246)
T d1y8ca_         107 CCLDS  111 (246)
T ss_dssp             ECTTG
T ss_pred             eeeee
Confidence            65443

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=89.57  E-value=0.19  Score=38.09  Aligned_cols=31  Identities=29%  Similarity=0.433  Sum_probs=25.5

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCC-CeEEEEe
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVD  101 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~  101 (296)
                      |-||.|-| .|.||+.++|.+.+++ .+|+.+.
T Consensus         1 MIKVaING-fGRIGR~v~Ral~~~~dievVaIn   32 (178)
T d1b7go1           1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVA   32 (178)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEE
T ss_pred             CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEE
Confidence            45789998 7999999999999874 5777654

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=89.57  E-value=0.2  Score=38.11  Aligned_cols=33  Identities=21%  Similarity=0.179  Sum_probs=27.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhC--CCeEEEEecCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLS  104 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~--G~~V~~~~r~~  104 (296)
                      |||+|.|| |++|.++|..|.+.  +.+|+++.|..
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            57999996 89999999999886  45888888654

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=89.39  E-value=0.98  Score=35.52  Aligned_cols=31  Identities=32%  Similarity=0.388  Sum_probs=26.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHh-CCCeEEEEe
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLK-DSYRVTIVD  101 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~-~G~~V~~~~  101 (296)
                      +++|+|-| .|-+|+++++.|.+ .|+.|+.++
T Consensus        31 g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          31 KATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            38999987 79999999999975 599998775

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.36  E-value=0.029  Score=44.21  Aligned_cols=26  Identities=35%  Similarity=0.445  Sum_probs=23.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRV   97 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V   97 (296)
                      |+|+|.|| |-+|..+|.+|+++|++|
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHTTT
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCc
Confidence            57999996 999999999999999753

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=89.06  E-value=0.21  Score=41.08  Aligned_cols=31  Identities=19%  Similarity=0.372  Sum_probs=22.7

Q ss_pred             cEEEEEcCCChhhH-----HHHHHHHhCCCeEEEEec
Q 022471           71 THVLVTGGAGYIGS-----HAALRLLKDSYRVTIVDN  102 (296)
Q Consensus        71 k~vlVTGasG~IG~-----~la~~L~~~G~~V~~~~r  102 (296)
                      |||+|++|+.| |-     +|+++|.++||+|..++.
T Consensus         1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~   36 (351)
T d1f0ka_           1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGT   36 (351)
T ss_dssp             CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEe
Confidence            57777765323 43     488999999999988763

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=88.95  E-value=0.19  Score=38.98  Aligned_cols=32  Identities=31%  Similarity=0.459  Sum_probs=27.9

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCC
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS  104 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~  104 (296)
                      +|+|.|| |--|...|..|+++|. +|+++.+++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            5899995 9999999999999996 699997654

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=88.76  E-value=0.69  Score=32.58  Aligned_cols=93  Identities=9%  Similarity=0.005  Sum_probs=55.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHh-CCCeEEEE-ecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLK-DSYRVTIV-DNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~-~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      .+|+|.|| |.+|.++++++.. .|++++++ |-++....   ..       -.++..+     ..+.++++.+ ..+++
T Consensus         4 ~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G---~~-------I~Gi~V~-----~~~~l~~~~~-~~i~i   66 (126)
T d2dt5a2           4 WGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDPEKVG---RP-------VRGGVIE-----HVDLLPQRVP-GRIEI   66 (126)
T ss_dssp             EEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCTTTTT---CE-------ETTEEEE-----EGGGHHHHST-TTCCE
T ss_pred             ceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCchHhcC---CE-------ECCEEEe-----cHHHHHHHHh-hcccE
Confidence            47999996 9999999998754 47787765 43222111   00       0233333     2344566654 35777


Q ss_pred             EEEcccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcccc
Q 022471          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCA  198 (296)
Q Consensus       149 vi~~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS~~  198 (296)
                      .+-+...                  ...+.+++.+.+.+++.|..++...
T Consensus        67 ai~~i~~------------------~~~~~I~d~l~~~gIk~I~~f~~~~   98 (126)
T d2dt5a2          67 ALLTVPR------------------EAAQKAADLLVAAGIKGILNFAPVV   98 (126)
T ss_dssp             EEECSCH------------------HHHHHHHHHHHHHTCCEEEECSSSC
T ss_pred             EEEeCCH------------------HHHHHHHHHHHHcCCCEEeecCcee
Confidence            6655421                  1234577788888998888776643

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=88.54  E-value=0.22  Score=37.03  Aligned_cols=35  Identities=23%  Similarity=0.195  Sum_probs=31.0

Q ss_pred             CccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        69 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      .+|+++|.| -|.+|+-+|+.|...|++|+++..++
T Consensus        22 aGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DP   56 (163)
T d1v8ba1          22 SGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDP   56 (163)
T ss_dssp             TTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred             cCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCc
Confidence            449999998 79999999999999999999987544

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.39  E-value=0.29  Score=35.13  Aligned_cols=34  Identities=24%  Similarity=0.305  Sum_probs=28.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHh----CCCeEEEEecCCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLK----DSYRVTIVDNLSR  105 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~----~G~~V~~~~r~~~  105 (296)
                      ++++|.|| |++|-++|..|++    .|.+|+++.+.+.
T Consensus        38 k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~   75 (137)
T d1m6ia2          38 KSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKG   75 (137)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence            78999985 9999999998863    5899999986553

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.21  E-value=0.33  Score=38.37  Aligned_cols=33  Identities=30%  Similarity=0.502  Sum_probs=28.9

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS  104 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~  104 (296)
                      .+|+|.|| |.-|..+|..|.+.|. .|.++.+.+
T Consensus         2 ~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           2 IDILIAGA-GIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            57999996 9999999999999995 888888754

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=88.14  E-value=0.25  Score=41.93  Aligned_cols=32  Identities=19%  Similarity=0.156  Sum_probs=24.4

Q ss_pred             cEEEEEcC------CChhh---HHHHHHHHhCCCeEEEEec
Q 022471           71 THVLVTGG------AGYIG---SHAALRLLKDSYRVTIVDN  102 (296)
Q Consensus        71 k~vlVTGa------sG~IG---~~la~~L~~~G~~V~~~~r  102 (296)
                      |||++.+.      +||+|   .+|+++|++.||+|+++..
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp   41 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTP   41 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEec
Confidence            45666554      58887   5579999999999998863

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.06  E-value=1.1  Score=33.40  Aligned_cols=71  Identities=11%  Similarity=0.064  Sum_probs=41.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhC-CCeEEEE-ecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIV-DNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~-G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      .++.|.| +|.+|+..++.|.+. +.+|+.+ +++.   +.+. .+.+...-+....+       .++++++++..++|+
T Consensus         2 iki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~---~~~~-~~~~~~~~~~~~~~-------~~~~~~ll~~~~iD~   69 (184)
T d1ydwa1           2 IRIGVMG-CADIARKVSRAIHLAPNATISGVASRSL---EKAK-AFATANNYPESTKI-------HGSYESLLEDPEIDA   69 (184)
T ss_dssp             EEEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSH---HHHH-HHHHHTTCCTTCEE-------ESSHHHHHHCTTCCE
T ss_pred             eEEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCc---cccc-cchhccccccceee-------cCcHHHhhhccccce
Confidence            5788999 588999999999876 6687765 4322   2222 22222211122222       123556666678999


Q ss_pred             EEEcc
Q 022471          149 VMHFA  153 (296)
Q Consensus       149 vi~~A  153 (296)
                      |+-+.
T Consensus        70 v~I~t   74 (184)
T d1ydwa1          70 LYVPL   74 (184)
T ss_dssp             EEECC
T ss_pred             eeecc
Confidence            98654

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.97  E-value=0.27  Score=40.20  Aligned_cols=31  Identities=32%  Similarity=0.470  Sum_probs=27.8

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        73 vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      |+|.|| |.-|...|..|+++|++|+++.++.
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            788885 9999999999999999999998654

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=87.83  E-value=0.29  Score=35.87  Aligned_cols=31  Identities=32%  Similarity=0.510  Sum_probs=26.1

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      ||+|.|| |.+|.++|..|. ++.+|+++.+.+
T Consensus         2 rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLS-QTYEVTVIDKEP   32 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred             eEEEECC-cHHHHHHHHHHH-cCCCEEEEeccc
Confidence            6889985 899999999996 478999998654

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=87.53  E-value=0.45  Score=36.80  Aligned_cols=78  Identities=15%  Similarity=0.046  Sum_probs=50.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +++||=.|++.|.-   +..|++.|.+|+++|.++.-.+.+.+.++.. . ..++.++.+|..+..     +..+.+|+|
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~-~-~~~i~~~~~d~~~l~-----~~~~~fD~v   85 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGN-G-HQQVEYVQGDAEQMP-----FTDERFHIV   85 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHT-T-CCSEEEEECCC-CCC-----SCTTCEEEE
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccc-c-ccccccccccccccc-----ccccccccc
Confidence            37899999766533   4667888999999986543333333333332 1 257899999988742     222578999


Q ss_pred             EEcccccC
Q 022471          150 MHFAAVAY  157 (296)
Q Consensus       150 i~~Ag~~~  157 (296)
                      +.+....+
T Consensus        86 ~~~~~l~~   93 (231)
T d1vl5a_          86 TCRIAAHH   93 (231)
T ss_dssp             EEESCGGG
T ss_pred             cccccccc
Confidence            87766543

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.49  E-value=0.73  Score=35.61  Aligned_cols=79  Identities=16%  Similarity=0.089  Sum_probs=50.4

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      .+||-.|+..|--.++..++...+.+|+.++.++...+.+.+.++...  -.++.++.+|..+.     ......+|.|+
T Consensus        77 ~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~--~~n~~~~~~d~~~~-----~~~~~~fD~I~  149 (213)
T d1dl5a1          77 MRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG--IENVIFVCGDGYYG-----VPEFSPYDVIF  149 (213)
T ss_dssp             CEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT--CCSEEEEESCGGGC-----CGGGCCEEEEE
T ss_pred             ceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhc--ccccccccCchHHc-----cccccchhhhh
Confidence            789988876665555555555556689999876555554554444332  24677777776532     12235689999


Q ss_pred             Eccccc
Q 022471          151 HFAAVA  156 (296)
Q Consensus       151 ~~Ag~~  156 (296)
                      .+++..
T Consensus       150 ~~~~~~  155 (213)
T d1dl5a1         150 VTVGVD  155 (213)
T ss_dssp             ECSBBS
T ss_pred             hhccHH
Confidence            888754

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=87.49  E-value=0.41  Score=36.68  Aligned_cols=74  Identities=19%  Similarity=0.145  Sum_probs=49.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      .+||=.|++.|.   ++..|++.|++|+++|.++...+.+.+.+...   +..+.++..|..+..     +....+|+|+
T Consensus        39 ~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~---~~~~~~~~~d~~~l~-----~~~~~fD~I~  107 (226)
T d1ve3a1          39 GKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSR---ESNVEFIVGDARKLS-----FEDKTFDYVI  107 (226)
T ss_dssp             CEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCCEEEECCTTSCC-----SCTTCEEEEE
T ss_pred             CEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccc---ccccccccccccccc-----ccCcCceEEE
Confidence            579999987765   56788899999999996543333333333222   345778888887642     2225689998


Q ss_pred             Ecccc
Q 022471          151 HFAAV  155 (296)
Q Consensus       151 ~~Ag~  155 (296)
                      .....
T Consensus       108 ~~~~l  112 (226)
T d1ve3a1         108 FIDSI  112 (226)
T ss_dssp             EESCG
T ss_pred             Eecch
Confidence            77554

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=87.42  E-value=0.21  Score=38.29  Aligned_cols=31  Identities=19%  Similarity=0.198  Sum_probs=27.4

Q ss_pred             cEEEEEcCCChhhHH-----HHHHHHhCCCeEEEEe
Q 022471           71 THVLVTGGAGYIGSH-----AALRLLKDSYRVTIVD  101 (296)
Q Consensus        71 k~vlVTGasG~IG~~-----la~~L~~~G~~V~~~~  101 (296)
                      |+++|||-+.|+|+-     |++.|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            789999977799985     5789999999999986

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.39  E-value=0.67  Score=37.96  Aligned_cols=73  Identities=15%  Similarity=0.099  Sum_probs=47.1

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +++||-.|++.|+   ++..+++.|+ +|++++.++. ...+.+...+ .....++.++.+|+.+...     ...++|+
T Consensus        36 ~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~-~~~a~~~~~~-~~~~~~i~~~~~~~~~l~~-----~~~~~D~  105 (311)
T d2fyta1          36 DKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEI-LYQAMDIIRL-NKLEDTITLIKGKIEEVHL-----PVEKVDV  105 (311)
T ss_dssp             TCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTH-HHHHHHHHHH-TTCTTTEEEEESCTTTSCC-----SCSCEEE
T ss_pred             cCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHH-HHHHHHHHHH-hCCCccceEEEeeHHHhcC-----ccccceE
Confidence            3899999987664   5666777886 7898886542 2222222222 2223678999999887531     1257899


Q ss_pred             EEEc
Q 022471          149 VMHF  152 (296)
Q Consensus       149 vi~~  152 (296)
                      |+..
T Consensus       106 Ivse  109 (311)
T d2fyta1         106 IISE  109 (311)
T ss_dssp             EEEC
T ss_pred             EEEe
Confidence            9864

>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain
species: Thermotoga maritima [TaxId: 2336]

Probab=87.31  E-value=0.65  Score=30.75  Aligned_cols=30  Identities=20%  Similarity=0.271  Sum_probs=26.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEe
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVD  101 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~  101 (296)
                      |||||.| +||=-.+|+..|.+...+|+++-
T Consensus         1 MkVLviG-sGgREHAia~~l~~s~~~v~~~p   30 (90)
T d1vkza2           1 VRVHILG-SGGREHAIGWAFAKQGYEVHFYP   30 (90)
T ss_dssp             CEEEEEE-CSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHhcCCCeEEEec
Confidence            6899999 58888899999999999998763

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.27  E-value=0.14  Score=40.31  Aligned_cols=80  Identities=11%  Similarity=-0.005  Sum_probs=48.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhh---------------CCCCCceEEEEccCCCHH
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQEL---------------FPEPGRLQFIYADLGDAK  135 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~Dl~d~~  135 (296)
                      .+||..|.+.|   ..+..|++.|++|+++|-++...+.+.+.....               .....++.++.+|+.+..
T Consensus        47 ~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~  123 (229)
T d2bzga1          47 LRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFDLP  123 (229)
T ss_dssp             CEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGGGG
T ss_pred             CEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhhcc
Confidence            78999997654   457888999999999986543322222111100               011246788888887543


Q ss_pred             HHHHHhhcCCCcEEEEcccccC
Q 022471          136 AVNKFFSENAFDAVMHFAAVAY  157 (296)
Q Consensus       136 ~v~~~~~~~~~D~vi~~Ag~~~  157 (296)
                      ..    ....+|+|+-.+....
T Consensus       124 ~~----~~~~fd~i~~~~~l~~  141 (229)
T d2bzga1         124 RT----NIGKFDMIWDRGALVA  141 (229)
T ss_dssp             GS----CCCCEEEEEESSSTTT
T ss_pred             cc----ccCceeEEEEEEEEEe
Confidence            21    1146788877665443

>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Azotobacter vinelandii [TaxId: 354]

Probab=87.22  E-value=0.29  Score=39.73  Aligned_cols=35  Identities=23%  Similarity=0.274  Sum_probs=29.9

Q ss_pred             ccEEEEEcCCChhhHH-----HHHHHHhCCCeEEEEecCCC
Q 022471           70 VTHVLVTGGAGYIGSH-----AALRLLKDSYRVTIVDNLSR  105 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~-----la~~L~~~G~~V~~~~r~~~  105 (296)
                      |++|.|.| -||+|+-     |+..|++.|++|.++|-++.
T Consensus         2 Mr~Iaisg-KGGVGKTT~a~NLA~~LA~~G~rVLlID~DpQ   41 (289)
T d2afhe1           2 MRQCAIYG-KGGIGKSTTTQNLVAALAEMGKKVMIVGCDPK   41 (289)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred             ccEEEEEC-CCCCCHHHHHHHHHHHHHHCCCCEEEEecCCC
Confidence            68899988 8999986     57889999999999997654

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=87.13  E-value=0.67  Score=34.08  Aligned_cols=72  Identities=14%  Similarity=0.089  Sum_probs=37.8

Q ss_pred             cEEEEEcCCChhhHHHH-HHHHhC-CCeEEEE-ecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAA-LRLLKD-SYRVTIV-DNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la-~~L~~~-G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      .++.|.| +|+||..+. +.|.+. ..+++.+ +|+.....  .+..++     ..+.+.   ..+.+++.+..+..++|
T Consensus         5 irvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~--~~~a~~-----~~i~~~---~~~~d~l~~~~~~~~iD   73 (157)
T d1nvmb1           5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDG--LARAQR-----MGVTTT---YAGVEGLIKLPEFADID   73 (157)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHH--HHHHHH-----TTCCEE---SSHHHHHHHSGGGGGEE
T ss_pred             cEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccc--hhhhhh-----cCCccc---ccceeeeeecccccccC
Confidence            6899999 899999754 544443 3466665 44332211  111111     122221   12234444444335799


Q ss_pred             EEEEcc
Q 022471          148 AVMHFA  153 (296)
Q Consensus       148 ~vi~~A  153 (296)
                      +||.+.
T Consensus        74 iVf~AT   79 (157)
T d1nvmb1          74 FVFDAT   79 (157)
T ss_dssp             EEEECS
T ss_pred             EEEEcC
Confidence            999753

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=86.99  E-value=3.8  Score=29.59  Aligned_cols=77  Identities=14%  Similarity=0.158  Sum_probs=47.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCC---CHHHHHHH----hhc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG---DAKAVNKF----FSE  143 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---d~~~v~~~----~~~  143 (296)
                      +++.|.+.+||.|--++..+.+.|-++--      -.++..+.+++..+..... -=..|++   +.+.+.++    +++
T Consensus         4 ~rvaiit~sGG~~~l~aD~~~~~Gl~l~~------l~~~t~~~L~~~lp~~~~~-~NPlD~~~~~~~~~~~~~l~~~~~d   76 (163)
T d2csua3           4 NKVAIMTNAGGPGVLTADELDKRGLKLAT------LEEKTIEELRSFLPPMAAV-KNPVDMIASARGEDYYRTAKLLLQD   76 (163)
T ss_dssp             SEEEEEESCHHHHHHHHHHHHTTTCEECC------CCHHHHHHHHHHSCTTCEE-SSEEECCTTCCHHHHHHHHHHHHHS
T ss_pred             CeEEEEECChHHHHHHHHHHHHcCCccCC------CCHHHHHHHHHhCCCcccC-CCcccccCCCCHHHHHHHHHHHHcC
Confidence            78888888999999999999999977643      2345555666655432110 0123332   44444444    444


Q ss_pred             CCCcEEEEccc
Q 022471          144 NAFDAVMHFAA  154 (296)
Q Consensus       144 ~~~D~vi~~Ag  154 (296)
                      .++|.|+-...
T Consensus        77 ~~vd~v~v~~~   87 (163)
T d2csua3          77 PNVDMLIAICV   87 (163)
T ss_dssp             TTCSEEEEEEE
T ss_pred             CCcCEEEEeec
Confidence            78998765443

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=86.80  E-value=0.35  Score=37.87  Aligned_cols=32  Identities=31%  Similarity=0.471  Sum_probs=28.7

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 022471           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (296)
Q Consensus        73 vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~  105 (296)
                      |+|.|| |-.|...|..|+++|++|+++.+...
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            889996 89999999999999999999987553

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.68  E-value=0.81  Score=35.12  Aligned_cols=78  Identities=12%  Similarity=-0.042  Sum_probs=44.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC---CcchhhhhhhhhCCCCCceE----EEEccCCCHHHHHHHhhc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR---GNIGAVKVLQELFPEPGRLQ----FIYADLGDAKAVNKFFSE  143 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~----~~~~Dl~d~~~v~~~~~~  143 (296)
                      |+|++.| ++..|..+.+.|.++|++|+++.-.+.   +.....+...+..   -.+.    ...-+..+.+.++. +++
T Consensus         1 MkI~~~G-~~~~~~~~l~~L~~~~~~i~~V~t~p~~~~~~~~v~~~a~~~~---ipv~~~~~~~~~~~~~~~~~~~-l~~   75 (203)
T d2bw0a2           1 MKIAVIG-QSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKDG---VPVFKYSRWRAKGQALPDVVAK-YQA   75 (203)
T ss_dssp             CEEEEEC-CHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHHT---CCEEECSCCEETTEECHHHHHH-HHT
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHCCCcEEEEEcCCCcCcCCChhhhhHHhcC---CcccccccccccccccHHHHHH-HHH
Confidence            5677776 578899999999999999886542111   1122222222211   1111    12234445555544 444


Q ss_pred             CCCcEEEEcc
Q 022471          144 NAFDAVMHFA  153 (296)
Q Consensus       144 ~~~D~vi~~A  153 (296)
                      .++|++|-..
T Consensus        76 ~~~Dliv~~~   85 (203)
T d2bw0a2          76 LGAELNVLPF   85 (203)
T ss_dssp             TCCSEEEESS
T ss_pred             hCCCceEEee
Confidence            6899988754

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=86.56  E-value=1.6  Score=34.70  Aligned_cols=70  Identities=19%  Similarity=0.021  Sum_probs=47.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      ++||=.|.+.|+   ++..+++.|++|+++|.++...+.+.+.++..   +.+..++.+|+.+      .+....+|+|+
T Consensus       122 ~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n---~~~~~~~~~d~~~------~~~~~~fD~V~  189 (254)
T d2nxca1         122 DKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRN---GVRPRFLEGSLEA------ALPFGPFDLLV  189 (254)
T ss_dssp             CEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHT---TCCCEEEESCHHH------HGGGCCEEEEE
T ss_pred             CEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHc---CCceeEEeccccc------cccccccchhh
Confidence            789999987775   34467778999999998766555444443332   3456677777532      23336799998


Q ss_pred             Ec
Q 022471          151 HF  152 (296)
Q Consensus       151 ~~  152 (296)
                      .|
T Consensus       190 an  191 (254)
T d2nxca1         190 AN  191 (254)
T ss_dssp             EE
T ss_pred             hc
Confidence            76

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=86.47  E-value=0.85  Score=34.43  Aligned_cols=75  Identities=12%  Similarity=0.087  Sum_probs=46.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      ++||=.|++.|   .++..|++.+.+|++++.++...+.+.+.++...-...++.++.+|+.+.      +....+|+|+
T Consensus        54 ~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~------~~~~~fD~Ii  124 (194)
T d1dusa_          54 DDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN------VKDRKYNKII  124 (194)
T ss_dssp             CEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT------CTTSCEEEEE
T ss_pred             CeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhh------hccCCceEEE
Confidence            67777775544   33455667888999998765444434333333222234688999998652      2235799999


Q ss_pred             Eccc
Q 022471          151 HFAA  154 (296)
Q Consensus       151 ~~Ag  154 (296)
                      .+..
T Consensus       125 ~~~p  128 (194)
T d1dusa_         125 TNPP  128 (194)
T ss_dssp             ECCC
T ss_pred             Eccc
Confidence            8743

>d1jyea_ c.93.1.1 (A:) Lac-repressor (lacR) core (C-terminal domain) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Periplasmic binding protein-like I
superfamily: Periplasmic binding protein-like I
family: L-arabinose binding protein-like
domain: Lac-repressor (lacR) core (C-terminal domain)
species: Escherichia coli [TaxId: 562]

Probab=86.30  E-value=2.7  Score=32.96  Aligned_cols=110  Identities=12%  Similarity=-0.008  Sum_probs=59.5

Q ss_pred             hhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEEEcccccCcCC
Q 022471           81 YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGE  160 (296)
Q Consensus        81 ~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi~~Ag~~~~~~  160 (296)
                      -|-..+-+++.++|++|.+..-.....+...+.++.+...+..-..+..+..+.+.+...+...++=+|+..... ....
T Consensus        17 ~i~~~i~~~a~~~Gy~v~v~~~~~~~~~~~~~~l~~l~~~~vdgiIl~~~~~~~~~~~~~~~~~~iPvV~~d~~~-~~~~   95 (271)
T d1jyea_          17 QIVAAILSRADQLGASVVVSMVERSGVEACKTAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSD-QTPI   95 (271)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEECCSSSHHHHHHHHHHHHTTTCSCEEEESCCCHHHHHHHHHHTTTSCEEESSSCT-TSSS
T ss_pred             HHHHHHHHHHHHcCCEEEEEECCCCCHHHHHHHHHHHHhcCCCEEEeccccCchhHHHHHHHhcCCCeeeeeccc-cccC
Confidence            356677788888999998765322223333344554433322222334455444444444444455555543211 1110


Q ss_pred             CCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          161 STLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       161 ~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                         .  ...-.|..+...+++.+.+.|.++|.++++
T Consensus        96 ---~--~V~~D~~~~~~~~~~~L~~~G~~~i~~i~~  126 (271)
T d1jyea_          96 ---N--SIIFSHEDGTRLGVEHLVALGHQQIALLAG  126 (271)
T ss_dssp             ---C--EEEECHHHHHHHHHHHHHHHTCCSEEEEEC
T ss_pred             ---C--ccccchhhccccceeeeecccccccccccc
Confidence               0  111235567777888888888889998875

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=86.07  E-value=0.59  Score=37.75  Aligned_cols=78  Identities=17%  Similarity=0.084  Sum_probs=46.7

Q ss_pred             cEEE-EEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           71 THVL-VTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vl-VTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      ++++ +.+|+|.|+..+++   ...++|+++|.++....-+.+.++... -..++.+...|+.+...  ...  +++|+|
T Consensus       112 ~~vld~g~GsG~i~~~la~---~~~~~v~a~Dis~~Al~~A~~Na~~~~-~~~~~~i~~~~~~~~~~--~~~--~~fDlI  183 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVAK---FSDAIVFATDVSSKAVEIARKNAERHG-VSDRFFVRKGEFLEPFK--EKF--ASIEMI  183 (271)
T ss_dssp             CEEEEESCTTSHHHHHHHH---HSSCEEEEEESCHHHHHHHHHHHHHTT-CTTSEEEEESSTTGGGG--GGT--TTCCEE
T ss_pred             cEEEEeeeeeehhhhhhhh---cccceeeechhhhhHHHHHHHHHHHcC-CCceeEEeecccccccc--ccc--CcccEE
Confidence            4555 55555556666543   356899999976654444444443332 22467778888876421  111  579999


Q ss_pred             EEccccc
Q 022471          150 MHFAAVA  156 (296)
Q Consensus       150 i~~Ag~~  156 (296)
                      |.|--+.
T Consensus       184 VsNPPYI  190 (271)
T d1nv8a_         184 LSNPPYV  190 (271)
T ss_dssp             EECCCCB
T ss_pred             EEccccc
Confidence            9996543

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=85.87  E-value=0.46  Score=36.76  Aligned_cols=76  Identities=11%  Similarity=0.083  Sum_probs=49.6

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +.+||=.|++.|.-...+..+...| +|++++.++...+.+.+..+.    ..++.++..|..++......+  ..+|++
T Consensus        57 g~~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a~~----~~ni~~i~~d~~~~~~~~~~~--~~vd~v  129 (209)
T d1nt2a_          57 DERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELVRE----RNNIIPLLFDASKPWKYSGIV--EKVDLI  129 (209)
T ss_dssp             SCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHHHH----CSSEEEECSCTTCGGGTTTTC--CCEEEE
T ss_pred             CCEEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHhhc----cCCceEEEeeccCcccccccc--ceEEEE
Confidence            3788888877664433333344455 899998766544444444333    257899999999887665544  467888


Q ss_pred             EEc
Q 022471          150 MHF  152 (296)
Q Consensus       150 i~~  152 (296)
                      +|.
T Consensus       130 ~~~  132 (209)
T d1nt2a_         130 YQD  132 (209)
T ss_dssp             EEC
T ss_pred             Eec
Confidence            775

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=85.77  E-value=0.49  Score=37.09  Aligned_cols=72  Identities=25%  Similarity=0.251  Sum_probs=47.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      ++||=.|++.|   .++..|++.|++|++++.++.-.+.+.+.+++   .+.++.++.+|+.+..     ++ ..+|.|+
T Consensus        43 ~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~---~~~~i~~~~~d~~~l~-----~~-~~fD~I~  110 (251)
T d1wzna1          43 RRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKE---RNLKIEFLQGDVLEIA-----FK-NEFDAVT  110 (251)
T ss_dssp             CEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH---TTCCCEEEESCGGGCC-----CC-SCEEEEE
T ss_pred             CEEEEeCCCCC---ccchhhcccceEEEEEeecccccccccccccc---ccccchheehhhhhcc-----cc-cccchHh
Confidence            68999997664   44667889999999999654333333333222   2347899999987643     12 4689888


Q ss_pred             Eccc
Q 022471          151 HFAA  154 (296)
Q Consensus       151 ~~Ag  154 (296)
                      ..-+
T Consensus       111 ~~~~  114 (251)
T d1wzna1         111 MFFS  114 (251)
T ss_dssp             ECSS
T ss_pred             hhhh
Confidence            7533

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=85.75  E-value=0.12  Score=37.91  Aligned_cols=80  Identities=9%  Similarity=-0.010  Sum_probs=38.4

Q ss_pred             EEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCC----CceEEEEccCCCHHHHHHHhhc--CCCcE
Q 022471           75 VTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEP----GRLQFIYADLGDAKAVNKFFSE--NAFDA  148 (296)
Q Consensus        75 VTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~d~~~v~~~~~~--~~~D~  148 (296)
                      +.| +|-+|+++++.|.+.++.+.+.+|+..+.+++.+.......+.    ...+.+..-+.| +.+.+++.+  .+=.+
T Consensus         4 fIG-~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~~~~~~~~~~~~DiVil~v~d-~~i~~v~~~l~~~~~i   81 (153)
T d2i76a2           4 FVG-TGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVIVPD-RYIKTVANHLNLGDAV   81 (153)
T ss_dssp             EES-CCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEECSCT-TTHHHHHTTTCCSSCC
T ss_pred             EEe-CcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccccccchhhhhccCcEEEEeccc-hhhhHHHhhhccccee
Confidence            444 7999999999886644444567765544444433322111111    111222222222 345555543  23357


Q ss_pred             EEEccccc
Q 022471          149 VMHFAAVA  156 (296)
Q Consensus       149 vi~~Ag~~  156 (296)
                      +||+++..
T Consensus        82 vi~~s~~~   89 (153)
T d2i76a2          82 LVHCSGFL   89 (153)
T ss_dssp             EEECCSSS
T ss_pred             eeecccch
Confidence            88988753

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=85.44  E-value=0.71  Score=36.12  Aligned_cols=74  Identities=18%  Similarity=0.108  Sum_probs=46.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      .+||-.|++.|--.+   .|++.+.+|+.+++.+.-.+.+.    +......++.++.+|..+.     ..+++.+|.|+
T Consensus        72 ~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~----~~~~~~~nv~~~~~d~~~g-----~~~~~pfD~Ii  139 (224)
T d1vbfa_          72 QKVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYAS----KLLSYYNNIKLILGDGTLG-----YEEEKPYDRVV  139 (224)
T ss_dssp             CEEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHH----HHHTTCSSEEEEESCGGGC-----CGGGCCEEEEE
T ss_pred             ceEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHH----HHHhcccccccccCchhhc-----chhhhhHHHHH
Confidence            789999977664333   45555678999986543333222    2222336889999987542     11235789999


Q ss_pred             Eccccc
Q 022471          151 HFAAVA  156 (296)
Q Consensus       151 ~~Ag~~  156 (296)
                      -+|+..
T Consensus       140 v~~a~~  145 (224)
T d1vbfa_         140 VWATAP  145 (224)
T ss_dssp             ESSBBS
T ss_pred             hhcchh
Confidence            888754

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=85.25  E-value=0.54  Score=38.45  Aligned_cols=33  Identities=30%  Similarity=0.461  Sum_probs=29.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      -.|+|.|| |.-|..++..|.++|.+|+++.+.+
T Consensus         8 ~dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~   40 (298)
T d1w4xa1           8 VDVLVVGA-GFSGLYALYRLRELGRSVHVIETAG   40 (298)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CCEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCC
Confidence            56999996 9999999999999999999998654

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=84.78  E-value=3.6  Score=31.14  Aligned_cols=82  Identities=13%  Similarity=0.046  Sum_probs=47.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhh-----hhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAV-----KVLQELFPEPGRLQFIYADLGDAKAVNKFFSENA  145 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~  145 (296)
                      |+|++.| ++-.+..+.+.|.+.|++|..+.-.+.+.....     ........ ..++.+...+..+.+...+.++..+
T Consensus         4 mKI~f~G-~~~~~~~~L~~L~~~~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   81 (206)
T d1fmta2           4 LRIIFAG-TPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAE-EKGLPVFQPVSLRPQENQQLVAELQ   81 (206)
T ss_dssp             CEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHH-HTTCCEECCSCSCSHHHHHHHHHTT
T ss_pred             cEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEeCCCcccccCccccccchhhhhh-ccCccccccccccchhhHHHHhhhc
Confidence            6788887 577899999999999999776542221111000     00000100 1234455555555566666676678


Q ss_pred             CcEEEEccc
Q 022471          146 FDAVMHFAA  154 (296)
Q Consensus       146 ~D~vi~~Ag  154 (296)
                      +|+++-...
T Consensus        82 ~d~~v~~~~   90 (206)
T d1fmta2          82 ADVMVVVAY   90 (206)
T ss_dssp             CSEEEEESC
T ss_pred             ceEEEeecc
Confidence            998876544

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=84.51  E-value=1.1  Score=34.78  Aligned_cols=78  Identities=13%  Similarity=0.117  Sum_probs=52.3

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      .+||..|+++|--.++.-.|.  |.+|+.+.+.+.-.+.+.+.+++..  -.++.++.+|..+.     ......+|.|+
T Consensus        80 ~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g--~~nv~~~~gd~~~g-----~~~~~pfD~Ii  150 (215)
T d1jg1a_          80 MNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAG--VKNVHVILGDGSKG-----FPPKAPYDVII  150 (215)
T ss_dssp             CCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTT--CCSEEEEESCGGGC-----CGGGCCEEEEE
T ss_pred             ceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcC--CceeEEEECccccC-----CcccCcceeEE
Confidence            689988887777777766666  4678888876444444444444432  26789999998642     12236789999


Q ss_pred             EcccccC
Q 022471          151 HFAAVAY  157 (296)
Q Consensus       151 ~~Ag~~~  157 (296)
                      -++++..
T Consensus       151 v~~a~~~  157 (215)
T d1jg1a_         151 VTAGAPK  157 (215)
T ss_dssp             ECSBBSS
T ss_pred             eeccccc
Confidence            8887654

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=83.87  E-value=0.53  Score=38.17  Aligned_cols=31  Identities=26%  Similarity=0.406  Sum_probs=28.2

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 022471           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (296)
Q Consensus        73 vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~  104 (296)
                      |+|.|| |..|...|.+|+++|++|+++.+.+
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            899995 9999999999999999999998654

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=83.68  E-value=1.1  Score=32.74  Aligned_cols=33  Identities=27%  Similarity=0.233  Sum_probs=27.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCe-EEEEecCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLS  104 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~-V~~~~r~~  104 (296)
                      ++|+|.|| |.+|...|..+.+.|++ |+++.|..
T Consensus        46 ~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          46 GAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             SEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            67889885 99999999999999985 77777654

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.68  E-value=0.93  Score=35.32  Aligned_cols=82  Identities=21%  Similarity=0.209  Sum_probs=55.7

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCC---CCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP---EPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      .+||-.|.++|--.++..++.....+|+.+++.+.-.+.+.+.+++...   ...++.+..+|..+.     ..+...+|
T Consensus        78 ~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~-----~~~~~~fD  152 (224)
T d1i1na_          78 AKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG-----YAEEAPYD  152 (224)
T ss_dssp             CEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC-----CGGGCCEE
T ss_pred             CeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecccc-----cchhhhhh
Confidence            7999999988888888778888788999998765544444444443211   124677788887532     12235789


Q ss_pred             EEEEcccccC
Q 022471          148 AVMHFAAVAY  157 (296)
Q Consensus       148 ~vi~~Ag~~~  157 (296)
                      .|+.+++...
T Consensus       153 ~I~~~~~~~~  162 (224)
T d1i1na_         153 AIHVGAAAPV  162 (224)
T ss_dssp             EEEECSBBSS
T ss_pred             hhhhhcchhh
Confidence            9998887543

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=83.56  E-value=0.25  Score=36.98  Aligned_cols=30  Identities=27%  Similarity=0.302  Sum_probs=24.6

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEe
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVD  101 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~  101 (296)
                      .+|+|.| +|.+|.++|..|.+.|.+|.++.
T Consensus         4 a~VvIIG-gG~~G~e~A~~l~~~g~~v~i~~   33 (183)
T d1d7ya1           4 APVVVLG-AGLASVSFVAELRQAGYQGLITV   33 (183)
T ss_dssp             SSEEEEC-CSHHHHHHHHHHHHHTCCSCEEE
T ss_pred             CCEEEEC-ccHHHHHHHHHHHhcCCceEEEE
Confidence            3589999 59999999999999997655443

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=83.29  E-value=1.8  Score=35.25  Aligned_cols=73  Identities=16%  Similarity=0.091  Sum_probs=47.0

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +++||-.|++.|+   ++..+++.|+ +|++++.++ ....+.+.++. .....++.++.+|+.+.+     +....+|+
T Consensus        34 ~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~-n~~~~~v~~~~~~~~~~~-----~~~~~~D~  103 (316)
T d1oria_          34 DKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSS-ISDYAVKIVKA-NKLDHVVTIIKGKVEEVE-----LPVEKVDI  103 (316)
T ss_dssp             TCEEEEETCTTSH---HHHHHHHTTCSEEEEEECST-THHHHHHHHHH-TTCTTTEEEEESCTTTCC-----CSSSCEEE
T ss_pred             cCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcH-HHhhhhhHHHH-hCCccccceEeccHHHcc-----cccceeEE
Confidence            3899999987664   5566777886 699998543 33333333222 222367999999998753     12257899


Q ss_pred             EEEc
Q 022471          149 VMHF  152 (296)
Q Consensus       149 vi~~  152 (296)
                      |+..
T Consensus       104 ivs~  107 (316)
T d1oria_         104 IISE  107 (316)
T ss_dssp             EEEC
T ss_pred             Eeee
Confidence            9874

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=82.91  E-value=0.4  Score=35.49  Aligned_cols=76  Identities=13%  Similarity=0.084  Sum_probs=41.6

Q ss_pred             cEEEEEcCCChhhHHHHHH-HHhC-----CCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcC
Q 022471           71 THVLVTGGAGYIGSHAALR-LLKD-----SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSEN  144 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~-L~~~-----G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~  144 (296)
                      |||.|.||++ +|...+-. |+..     +.++++.|.++.+.....+.........  ..... . ++.   .+.+  .
T Consensus         1 mKIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~--~~~~~-t-~~~---~~~l--~   70 (162)
T d1up7a1           1 MRIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDR--FKVLI-S-DTF---EGAV--V   70 (162)
T ss_dssp             CEEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTS--SEEEE-C-SSH---HHHH--T
T ss_pred             CEEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccC--ceEEE-e-cCc---cccc--C
Confidence            5789999844 67665532 3221     3589999976654443333323222221  22211 1 222   2334  5


Q ss_pred             CCcEEEEccccc
Q 022471          145 AFDAVMHFAAVA  156 (296)
Q Consensus       145 ~~D~vi~~Ag~~  156 (296)
                      +.|+||..||..
T Consensus        71 ~aDvVVita~~~   82 (162)
T d1up7a1          71 DAKYVIFQFRPG   82 (162)
T ss_dssp             TCSEEEECCCTT
T ss_pred             CCCEEEEecccC
Confidence            789999999864

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=82.49  E-value=0.71  Score=36.32  Aligned_cols=34  Identities=29%  Similarity=0.329  Sum_probs=29.9

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG  106 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~  106 (296)
                      .|+|.|| |--|...|..|+++|++|.++.+.+..
T Consensus         6 DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~~   39 (253)
T d2gqfa1           6 ENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKKI   39 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred             cEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence            4899996 999999999999999999999876543

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=82.38  E-value=0.65  Score=38.59  Aligned_cols=29  Identities=28%  Similarity=0.442  Sum_probs=26.9

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEec
Q 022471           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (296)
Q Consensus        73 vlVTGasG~IG~~la~~L~~~G~~V~~~~r  102 (296)
                      |+|.| +|.-|..+|.+|+++|++|.++-+
T Consensus         5 VIVVG-sG~aG~v~A~rLaeaG~~VlvLEa   33 (367)
T d1n4wa1           5 AVVIG-TGYGAAVSALRLGEAGVQTLMLEM   33 (367)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEEES
T ss_pred             EEEeC-cCHHHHHHHHHHHHCcCeEEEEec
Confidence            78888 699999999999999999999976

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=82.26  E-value=0.67  Score=37.91  Aligned_cols=33  Identities=39%  Similarity=0.483  Sum_probs=28.1

Q ss_pred             EEEEEcCCChhhHHHHHHHH-----hCCCeEEEEecCCC
Q 022471           72 HVLVTGGAGYIGSHAALRLL-----KDSYRVTIVDNLSR  105 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~-----~~G~~V~~~~r~~~  105 (296)
                      -|+|.|| |-.|..+|..|+     ++|++|+++.|.+.
T Consensus         9 DV~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~~   46 (360)
T d1pn0a1           9 DVLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRST   46 (360)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCCC
Confidence            4899996 999999999996     57999999987543

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=82.06  E-value=0.64  Score=35.87  Aligned_cols=33  Identities=21%  Similarity=0.251  Sum_probs=28.6

Q ss_pred             cEEEEEcCCChhhHH-----HHHHHHhCCCeEEEEecC
Q 022471           71 THVLVTGGAGYIGSH-----AALRLLKDSYRVTIVDNL  103 (296)
Q Consensus        71 k~vlVTGasG~IG~~-----la~~L~~~G~~V~~~~r~  103 (296)
                      |.|.|+|+.||+|+.     ++..|++.|.+|.++|-+
T Consensus         3 ~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           3 RIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             eEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            678999999999985     577888999999999854

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=81.87  E-value=0.6  Score=37.76  Aligned_cols=75  Identities=16%  Similarity=0.138  Sum_probs=49.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi  150 (296)
                      +.+=+--|||.||..++..+  ...+|+++|.++...+-+.+.++...-  .++++++.|+.+.      +...++|+||
T Consensus       111 ~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~~--~~v~~~~~d~~~~------~~~~~fDlIv  180 (274)
T d2b3ta1         111 RILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLAI--KNIHILQSDWFSA------LAGQQFAMIV  180 (274)
T ss_dssp             EEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHTC--CSEEEECCSTTGG------GTTCCEEEEE
T ss_pred             ceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhCc--ccceeeecccccc------cCCCceeEEE
Confidence            33444456788888877654  357999998766554444444444422  3689999998754      2225799999


Q ss_pred             Ecccc
Q 022471          151 HFAAV  155 (296)
Q Consensus       151 ~~Ag~  155 (296)
                      .|--.
T Consensus       181 sNPPY  185 (274)
T d2b3ta1         181 SNPPY  185 (274)
T ss_dssp             ECCCC
T ss_pred             ecchh
Confidence            99643

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=81.69  E-value=1.7  Score=32.01  Aligned_cols=30  Identities=17%  Similarity=0.238  Sum_probs=24.1

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhC-CCeEEEEe
Q 022471           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIVD  101 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~  101 (296)
                      .+|.|.| .|.+|+..++.|.+. +.+++.+.
T Consensus         4 irvgiiG-~G~ig~~~~~~l~~~~~~elvav~   34 (170)
T d1f06a1           4 IRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIF   34 (170)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             ceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEE
Confidence            5788998 599999999999885 66776544

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=81.55  E-value=3.2  Score=30.65  Aligned_cols=30  Identities=23%  Similarity=0.366  Sum_probs=24.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCC-CeEEEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDS-YRVTIV  100 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G-~~V~~~  100 (296)
                      |++|.|-| -|-||+.++|.+.+++ .+|+.+
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaI   31 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGV   31 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEE
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEE
Confidence            68899998 7999999999998876 456554

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=81.55  E-value=0.64  Score=40.28  Aligned_cols=23  Identities=13%  Similarity=0.144  Sum_probs=19.9

Q ss_pred             CChhh---HHHHHHHHhCCCeEEEEe
Q 022471           79 AGYIG---SHAALRLLKDSYRVTIVD  101 (296)
Q Consensus        79 sG~IG---~~la~~L~~~G~~V~~~~  101 (296)
                      +||+|   .+|+++|+++||+|.++.
T Consensus        16 ~GGl~~vv~~La~~L~~~Gh~V~Vi~   41 (477)
T d1rzua_          16 TGGLADVVGALPIALEAHGVRTRTLI   41 (477)
T ss_dssp             SSHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred             cCcHHHHHHHHHHHHHHcCCeEEEEe
Confidence            58988   567999999999999875

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=81.36  E-value=1.2  Score=34.54  Aligned_cols=76  Identities=20%  Similarity=0.084  Sum_probs=49.8

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      +++||=.|++.|.   ++..|++.+.+|+.+|.++.-.+.+.+.+....  ..++.++.+|+.+..     +..+.+|+|
T Consensus        17 ~~rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~--~~~~~~~~~d~~~~~-----~~~~~fD~v   86 (234)
T d1xxla_          17 EHRVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEKG--VENVRFQQGTAESLP-----FPDDSFDII   86 (234)
T ss_dssp             TCEEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHT--CCSEEEEECBTTBCC-----SCTTCEEEE
T ss_pred             CCEEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhcccc--ccccccccccccccc-----cccccccee
Confidence            3789999987774   445677889999999966543333443333321  146889999987632     223578988


Q ss_pred             EEcccc
Q 022471          150 MHFAAV  155 (296)
Q Consensus       150 i~~Ag~  155 (296)
                      +.+-..
T Consensus        87 ~~~~~l   92 (234)
T d1xxla_          87 TCRYAA   92 (234)
T ss_dssp             EEESCG
T ss_pred             eeecee
Confidence            766544

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=81.30  E-value=0.84  Score=36.46  Aligned_cols=33  Identities=33%  Similarity=0.514  Sum_probs=29.0

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCC
Q 022471           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLS  104 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~  104 (296)
                      .-|+|.|| |.-|...|..|+++ |++|.++++.+
T Consensus        34 ~DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~   67 (278)
T d1rp0a1          34 TDVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSV   67 (278)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred             CCEEEECC-CHHHHHHHHHHHHccCCeEEEEecCC
Confidence            34999997 99999999999885 99999999765

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=80.89  E-value=1.9  Score=35.32  Aligned_cols=73  Identities=18%  Similarity=0.049  Sum_probs=46.2

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      ++||-.|++.|+   ++..+++.|+ +|++++.++ ....+.+..++ .....++.++.+|+.+.+     +....+|+|
T Consensus        40 ~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~-~~~~~~i~~i~~~~~~l~-----~~~~~~D~i  109 (328)
T d1g6q1_          40 KIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVEL-NGFSDKITLLRGKLEDVH-----LPFPKVDII  109 (328)
T ss_dssp             CEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHH-TTCTTTEEEEESCTTTSC-----CSSSCEEEE
T ss_pred             CEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHH-hCccccceEEEeehhhcc-----CcccceeEE
Confidence            899999987653   4566777886 788888542 22222222222 233467899999988652     222578999


Q ss_pred             EEcc
Q 022471          150 MHFA  153 (296)
Q Consensus       150 i~~A  153 (296)
                      +..-
T Consensus       110 ~se~  113 (328)
T d1g6q1_         110 ISEW  113 (328)
T ss_dssp             EECC
T ss_pred             EEEe
Confidence            8754

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=80.78  E-value=1.6  Score=34.50  Aligned_cols=76  Identities=21%  Similarity=0.216  Sum_probs=49.8

Q ss_pred             CccEEEEEcCCCh-hhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCc
Q 022471           69 GVTHVLVTGGAGY-IGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (296)
Q Consensus        69 ~~k~vlVTGasG~-IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (296)
                      .+++||=.|+++| +..++++.+.. +.+|+.+++++...+.+.+.+++... ..++.+...|+.+.      +.+..+|
T Consensus        85 pG~rVLEiG~GsG~lt~~la~~v~~-~g~V~~vD~~e~~~~~A~~n~~~~~~-~~nv~~~~~Di~~~------~~~~~fD  156 (250)
T d1yb2a1          85 PGMDILEVGVGSGNMSSYILYALNG-KGTLTVVERDEDNLKKAMDNLSEFYD-IGNVRTSRSDIADF------ISDQMYD  156 (250)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHTT-SSEEEEECSCHHHHHHHHHHHHTTSC-CTTEEEECSCTTTC------CCSCCEE
T ss_pred             CcCEEEEeeeeCcHHHHHHHHHhCC-CcEEEEEECCHHHHHHHHHHHHHhcC-CCceEEEEeeeecc------cccceee
Confidence            3478998887654 55666666544 34899998765555555555544322 36789999998763      3335789


Q ss_pred             EEEEc
Q 022471          148 AVMHF  152 (296)
Q Consensus       148 ~vi~~  152 (296)
                      .|+.+
T Consensus       157 ~V~ld  161 (250)
T d1yb2a1         157 AVIAD  161 (250)
T ss_dssp             EEEEC
T ss_pred             eeeec
Confidence            99865

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.62  E-value=1.6  Score=33.40  Aligned_cols=84  Identities=13%  Similarity=0.160  Sum_probs=54.2

Q ss_pred             cEEEEEcCCChhhHH-HH---HHHHhCC-----CeEEEEecCCCCcchhhhhhhhhCCC-----------CCceEEEEcc
Q 022471           71 THVLVTGGAGYIGSH-AA---LRLLKDS-----YRVTIVDNLSRGNIGAVKVLQELFPE-----------PGRLQFIYAD  130 (296)
Q Consensus        71 k~vlVTGasG~IG~~-la---~~L~~~G-----~~V~~~~r~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~D  130 (296)
                      -+++|.||||-+-.. |.   -+|...|     ..|++++|.+...++..+.+......           -..+.++.+|
T Consensus        21 ~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~~~d  100 (203)
T d1qkia1          21 HIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVAGQ  100 (203)
T ss_dssp             EEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECCBCC
T ss_pred             cEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhccccCc
Confidence            689999999998875 22   2334444     57899999876655554443322211           1467888999


Q ss_pred             CCCHHHHHHHhhc-------CCCcEEEEccc
Q 022471          131 LGDAKAVNKFFSE-------NAFDAVMHFAA  154 (296)
Q Consensus       131 l~d~~~v~~~~~~-------~~~D~vi~~Ag  154 (296)
                      ++|.++..++-+.       .....|+..|-
T Consensus       101 ~~~~~~~~~L~~~l~~~~~~~~~~rifYLAv  131 (203)
T d1qkia1         101 YDDAASYQRLNSHMNALHLGSQANRLFYLAL  131 (203)
T ss_dssp             TTCHHHHHHHHHHHHHTTTTTTSEEEEEECS
T ss_pred             CCChhhHHHHHHHHHHHhcCCCcceEEEEec
Confidence            9999887765331       23456777763

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=80.62  E-value=1.3  Score=35.38  Aligned_cols=77  Identities=13%  Similarity=0.056  Sum_probs=47.5

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEE
Q 022471           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~v  149 (296)
                      .+||=.|++.|.   ++..|+++ |++|++++.++...+.+.+...... -..++.++.+|..+..     +..+.+|+|
T Consensus        69 ~~vLDiGcG~G~---~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~g-l~~~v~~~~~d~~~l~-----~~~~sfD~V  139 (282)
T d2o57a1          69 AKGLDLGAGYGG---AARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAG-LADNITVKYGSFLEIP-----CEDNSYDFI  139 (282)
T ss_dssp             CEEEEETCTTSH---HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHT-CTTTEEEEECCTTSCS-----SCTTCEEEE
T ss_pred             CEEEEeCCCCcH---HHhhhhccCCcEEEEEeccchhhhhhhccccccc-cccccccccccccccc-----ccccccchh
Confidence            789988874442   33445444 8899999865544333443333321 1257899999987742     223578999


Q ss_pred             EEccccc
Q 022471          150 MHFAAVA  156 (296)
Q Consensus       150 i~~Ag~~  156 (296)
                      +......
T Consensus       140 ~~~~~l~  146 (282)
T d2o57a1         140 WSQDAFL  146 (282)
T ss_dssp             EEESCGG
T ss_pred             hccchhh
Confidence            8765543

>d1ej0a_ c.66.1.2 (A:) RNA methyltransferase FtsJ {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: RNA methyltransferase FtsJ
domain: RNA methyltransferase FtsJ
species: Escherichia coli [TaxId: 562]

Probab=80.60  E-value=8.8  Score=28.25  Aligned_cols=75  Identities=17%  Similarity=0.123  Sum_probs=47.8

Q ss_pred             cEEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc---CCCc
Q 022471           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NAFD  147 (296)
Q Consensus        71 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---~~~D  147 (296)
                      ++|+=.|++=|==...+.+.......|+.+|..+...             -.++.++++|+.+.+........   .++|
T Consensus        24 ~~vlDLg~aPGgw~q~~~~~~~~~~~v~~vDl~~~~~-------------i~~~~~~~~d~~~~~~~~~~~~~~~~~~~D   90 (180)
T d1ej0a_          24 MTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDP-------------IVGVDFLQGDFRDELVMKALLERVGDSKVQ   90 (180)
T ss_dssp             CEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCC-------------CTTEEEEESCTTSHHHHHHHHHHHTTCCEE
T ss_pred             CeEEEEeccCCcceEEEEeeccccceEEEeecccccc-------------cCCceEeecccccchhhhhhhhhccCccee
Confidence            5677677654433334444444456788888544321             25788999999997765554433   6799


Q ss_pred             EEEEcccccCc
Q 022471          148 AVMHFAAVAYV  158 (296)
Q Consensus       148 ~vi~~Ag~~~~  158 (296)
                      +|+.-.+....
T Consensus        91 lVlSD~ap~~s  101 (180)
T d1ej0a_          91 VVMSDMAPNMS  101 (180)
T ss_dssp             EEEECCCCCCC
T ss_pred             EEEecccchhc
Confidence            99998775443

>d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: (Uracil-5-)-methyltransferase
domain: rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain
species: Escherichia coli [TaxId: 562]

Probab=80.36  E-value=1.1  Score=37.27  Aligned_cols=100  Identities=14%  Similarity=0.117  Sum_probs=57.9

Q ss_pred             EEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcEEEE
Q 022471           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMH  151 (296)
Q Consensus        72 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~vi~  151 (296)
                      .+=.-+|+|.+|..++    +.+.+|+++..++...+.+.+.++. . .-.++.++.+|+.+.-.... .....+|+||-
T Consensus       216 vlDLycG~G~fsl~La----~~~~~V~gvE~~~~ai~~A~~na~~-n-~i~n~~~~~~~~~~~~~~~~-~~~~~~d~vil  288 (358)
T d1uwva2         216 VLDLFCGMGNFTLPLA----TQAASVVGVEGVPALVEKGQQNARL-N-GLQNVTFYHENLEEDVTKQP-WAKNGFDKVLL  288 (358)
T ss_dssp             EEEESCTTTTTHHHHH----TTSSEEEEEESCHHHHHHHHHHHHH-T-TCCSEEEEECCTTSCCSSSG-GGTTCCSEEEE
T ss_pred             EEEecccccccchhcc----ccccEEEeccCcHHHHHHHHHhHHh-c-ccccceeeecchhhhhhhhh-hhhccCceEEe
Confidence            4446788888887764    5678999997544333333322221 1 12578899988876321111 11146898875


Q ss_pred             cccccCcCCCCcChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Q 022471          152 FAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (296)
Q Consensus       152 ~Ag~~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~riV~~SS  196 (296)
                      .=     +.  ..           ...+++.+.+.+.++|||+|-
T Consensus       289 DP-----PR--~G-----------~~~~~~~l~~~~~~~ivYVSC  315 (358)
T d1uwva2         289 DP-----AR--AG-----------AAGVMQQIIKLEPIRIVYVSC  315 (358)
T ss_dssp             CC-----CT--TC-----------CHHHHHHHHHHCCSEEEEEES
T ss_pred             CC-----CC--cc-----------HHHHHHHHHHcCCCEEEEEeC
Confidence            42     11  11           112445555667889999997

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=80.28  E-value=4  Score=33.20  Aligned_cols=77  Identities=16%  Similarity=0.007  Sum_probs=45.3

Q ss_pred             cEEEEEc-CCChhhHHHHHHHHhCCCeEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhc-CCCcE
Q 022471           71 THVLVTG-GAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (296)
Q Consensus        71 k~vlVTG-asG~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~  148 (296)
                      ++||=.. +||+++.+    +++.|++|+.++.+....+.+.+.++.-.-...++.++..|+.+.  +++...+ .++|+
T Consensus       134 ~rVLdlf~~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~~~--l~~~~~~~~~fD~  207 (309)
T d2igta1         134 LKVLNLFGYTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKF--IQREERRGSTYDI  207 (309)
T ss_dssp             CEEEEETCTTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHH--HHHHHHHTCCBSE
T ss_pred             CeEEEecCCCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHHHh--HHHHhhcCCCCCE
Confidence            5676544 45544444    456799999998654444333333322222234688999988643  3433332 57999


Q ss_pred             EEEcc
Q 022471          149 VMHFA  153 (296)
Q Consensus       149 vi~~A  153 (296)
                      ||..-
T Consensus       208 IilDP  212 (309)
T d2igta1         208 ILTDP  212 (309)
T ss_dssp             EEECC
T ss_pred             EEECC
Confidence            99864

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=80.08  E-value=0.75  Score=35.21  Aligned_cols=66  Identities=20%  Similarity=0.172  Sum_probs=43.3

Q ss_pred             ccEEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCcchhhhhhhhhCCCCCceEEEEccCCCHHHHHHHhhcCCCcE
Q 022471           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (296)
Q Consensus        70 ~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (296)
                      +++||=.|++.|+   ++..++..|+ +|+.++.++.    +.+.+++-   -.++.++.+|+.+.+        +++|+
T Consensus        49 Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~----a~~~ar~N---~~~~~~~~~D~~~l~--------~~fD~  110 (197)
T d1ne2a_          49 GRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPD----AIETAKRN---CGGVNFMVADVSEIS--------GKYDT  110 (197)
T ss_dssp             TSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHH----HHHHHHHH---CTTSEEEECCGGGCC--------CCEEE
T ss_pred             CCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHH----HHHHHHHc---cccccEEEEehhhcC--------CcceE
Confidence            3899998877663   3345666775 6999985432    22333322   246789999986431        57999


Q ss_pred             EEEcc
Q 022471          149 VMHFA  153 (296)
Q Consensus       149 vi~~A  153 (296)
                      ||-|-
T Consensus       111 Vi~NP  115 (197)
T d1ne2a_         111 WIMNP  115 (197)
T ss_dssp             EEECC
T ss_pred             EEeCc
Confidence            99874