BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>022473
MSGNANKRLRPNPPSQVPESGDSGIFNERILLLVFESVGWDLHMLCLTASLDRKLRAIAE
RLLWRKLCECRAPRMIETLANGAPNGRINGGWHALAKLMFHCCGCESTRNFKVSKASPAH
FVQASRFSKTSGRSFLTKKCRGDLLYVSDPCEHPMGNKEDDLGIFRGVFRGFLKSTTRAC
LIRRRVELEERVKCPYCGARVWSMTAARLVPKSAARRLGSHDGGLEYFVCINGHLHGSCW
LVPLSSEEDACDEDDDEDGEDGEDGGDDPDGAYDLDDNHEHRTVIKCEPHVAFSGV

High Scoring Gene Products

Symbol, full name Information P value
EDL3
EID1-like 3
protein from Arabidopsis thaliana 1.3e-84
EDL1
AT5G15440
protein from Arabidopsis thaliana 7.7e-48
EDL2
AT5G39360
protein from Arabidopsis thaliana 1.1e-46
EID1
EMPFINDLICHER IM DUNKELROTEN LICHT 1
protein from Arabidopsis thaliana 1.5e-06

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  022473
        (296 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2099227 - symbol:EDL3 "EID1-like 3" species:37...   847  1.3e-84   1
TAIR|locus:2180907 - symbol:EDL1 "AT5G15440" species:3702...   500  7.7e-48   1
TAIR|locus:2175668 - symbol:EDL2 "AT5G39360" species:3702...   489  1.1e-46   1
TAIR|locus:2133259 - symbol:EID1 "EMPFINDLICHER IM DUNKEL...   130  1.5e-06   2


>TAIR|locus:2099227 [details] [associations]
            symbol:EDL3 "EID1-like 3" species:3702 "Arabidopsis
            thaliana" [GO:0005634 "nucleus" evidence=IDA] [GO:0006970 "response
            to osmotic stress" evidence=IMP] [GO:0009414 "response to water
            deprivation" evidence=IMP] [GO:0009651 "response to salt stress"
            evidence=IMP] [GO:0009737 "response to abscisic acid stimulus"
            evidence=IMP] [GO:0009738 "abscisic acid mediated signaling
            pathway" evidence=IMP] [GO:0010029 "regulation of seed germination"
            evidence=IMP] [GO:0010228 "vegetative to reproductive phase
            transition of meristem" evidence=IMP] [GO:0006457 "protein folding"
            evidence=RCA] [GO:0009408 "response to heat" evidence=RCA]
            [GO:0009644 "response to high light intensity" evidence=RCA]
            [GO:0042542 "response to hydrogen peroxide" evidence=RCA]
            PROSITE:PS50181 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0009738 GO:GO:0009651 GO:GO:0009414 GO:GO:0010228
            GO:GO:0010029 EMBL:AL163816 HOGENOM:HOG000238370
            ProtClustDB:CLSN2687319 EMBL:AY056271 EMBL:BT020425 IPI:IPI00537861
            PIR:T48095 RefSeq:NP_567137.1 UniGene:At.26342
            ProteinModelPortal:Q93ZT5 SMR:Q93ZT5 IntAct:Q93ZT5
            EnsemblPlants:AT3G63060.1 GeneID:825481 KEGG:ath:AT3G63060
            TAIR:At3g63060 eggNOG:NOG299849 InParanoid:Q93ZT5 OMA:GNCWLAR
            PhylomeDB:Q93ZT5 Genevestigator:Q93ZT5 Uniprot:Q93ZT5
        Length = 272

 Score = 847 (303.2 bits), Expect = 1.3e-84, P = 1.3e-84
 Identities = 154/243 (63%), Positives = 185/243 (76%)

Query:     4 NANKRLRPNPPSQVPESGDSGIFNERILLLVFESVGWDLHMLCLTASLDRKLRAIAERLL 63
             N N+RL+ N PS++P SG SGI NER+L+LVFES+ WD+H LC  ASL R+  AIA R+L
Sbjct:    13 NTNRRLKFNQPSRLPNSGKSGIENERVLVLVFESISWDIHTLCTIASLSRRFCAIARRIL 72

Query:    64 WRKLCECRAPRMIETLANGAPNGRINGGWHALAKLMFHCCGCESTRNFKVSKASPAHFVQ 123
             WR+LC  RAP M+  L+   P+GRI+GGWHALAKLMF C G ESTR F +S+ +  HF  
Sbjct:    73 WRRLCVNRAPGMVAALSGEDPSGRIDGGWHALAKLMFFCGGGESTRYFNLSQPTSGHFAC 132

Query:   124 ASRFSKTSGRSFLTKKCRGDLLYVSDPCEHPMGNKEDDLGIFRGVFRGFLKSTTRACLIX 183
              SRFSKTSGR FL K CR DLLY+SDPCEH     ++ LG+FRGVFR F++S TR CL+ 
Sbjct:   133 ESRFSKTSGRFFLPKNCRRDLLYMSDPCEHQAVGGDEHLGVFRGVFREFMRSKTRECLVR 192

Query:   184 XXXXXXXXXKCPYCGARVWSMTAARLVPKSAARRLGSHDGGLEYFVCINGHLHGSCWLVP 243
                      +CPYCG RVWSMTAARLVPKSAARRLGS +GGLE+FVC+NGHLHG+CWL+P
Sbjct:   193 RQAALEEKVRCPYCGGRVWSMTAARLVPKSAARRLGSREGGLEFFVCVNGHLHGTCWLIP 252

Query:   244 LSS 246
             LSS
Sbjct:   253 LSS 255


>TAIR|locus:2180907 [details] [associations]
            symbol:EDL1 "AT5G15440" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] PROSITE:PS50181 EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AL391143 UniGene:At.49023
            UniGene:At.66737 EMBL:BT014972 EMBL:AK226950 IPI:IPI00531943
            PIR:T51522 RefSeq:NP_197048.1 ProteinModelPortal:Q9LF38 SMR:Q9LF38
            EnsemblPlants:AT5G15440.1 GeneID:831397 KEGG:ath:AT5G15440
            TAIR:At5g15440 eggNOG:NOG275348 HOGENOM:HOG000238370
            InParanoid:Q9LF38 OMA:SASCVCI PhylomeDB:Q9LF38
            ProtClustDB:CLSN2687319 Genevestigator:Q9LF38 Uniprot:Q9LF38
        Length = 293

 Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
 Identities = 95/222 (42%), Positives = 136/222 (61%)

Query:    24 GIFNERILLLVFESVGWDLHMLCLTASLDRKLRAIAERLLWRKLCECRAPRMIETLANGA 83
             G  NE +LLLVF+ + W+  ++   + + R     A+R+LW++ C+ RAP+M+  L +  
Sbjct:    20 GHLNEDVLLLVFQHLNWNPKLVATLSCVCRWFDDFAKRVLWKEFCKTRAPKMMLDLQSSG 79

Query:    84 PNGRINGGWHALAKLMFHCCGCESTRNFKVSKASPAHFVQASRFSKTSGRSFLTKKCRGD 143
              +  I+G W AL KL+ +C GC     F  S   P HFV  +RFS+T GRS L  +CR D
Sbjct:    80 SHC-IDGNWRALGKLLIYCSGCTQGGLFNSSVQIPGHFVYRTRFSRTLGRSLLPPQCRTD 138

Query:   144 LLYVSDPCEHPMGNKEDDLGIFRGVFRGFLKSTTRACLIXXXXXXXXXXKCPYCGARVWS 203
             +LYV DPCEH    +E D+G+FRG+F+ F  S  R  +I           CPYC A++WS
Sbjct:   139 VLYVCDPCEHLDQGEEGDVGLFRGIFKSFPTSKVRKVIINKAVPFHPSEVCPYCKAKLWS 198

Query:   204 MTAARLVPKSAARRLGSHDGGLEYFVCINGHLHGSCWLVPLS 245
             M  A+++P+SA  RL +++  +EYFVC+NGHL G C L PLS
Sbjct:   199 MLQAKIIPQSACIRLEAYEDCIEYFVCLNGHLLGICTLAPLS 240


>TAIR|locus:2175668 [details] [associations]
            symbol:EDL2 "AT5G39360" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] PROSITE:PS50181 EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AB009054 HOGENOM:HOG000238370
            ProtClustDB:CLSN2687319 EMBL:AY075673 EMBL:AY133632 IPI:IPI00517595
            RefSeq:NP_198752.1 UniGene:At.43637 ProteinModelPortal:Q9FLZ8
            PaxDb:Q9FLZ8 EnsemblPlants:AT5G39360.1 GeneID:833932
            KEGG:ath:AT5G39360 TAIR:At5g39360 eggNOG:NOG297604
            InParanoid:Q9FLZ8 OMA:EDSIEYY PhylomeDB:Q9FLZ8
            Genevestigator:Q9FLZ8 Uniprot:Q9FLZ8
        Length = 249

 Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
 Identities = 91/223 (40%), Positives = 139/223 (62%)

Query:    24 GIFNERILLLVFESVGWDLHMLCLTASLDRKLRAIAERLLWRKLCECRAPRMIETLANGA 83
             G  +E +L L+ + + W+ +++   + + +    +A+RLLW++ C  RAP+M+  L +  
Sbjct:    20 GHLSEEVLFLMVQHLNWNPNVIATLSCVCKWFDDLAKRLLWKEFCRARAPKMMSDLQSSG 79

Query:    84 PNGRINGGWHALAKLMFHCCGCESTRNFKVSKASPAHFVQASRFSKTSGRSFLTKKCR-G 142
              +  ++G W AL KL+ +C G      F   + S  HFV  +RFS+TSGRSFL  +CR  
Sbjct:    80 SHS-VDGSWRALGKLLIYCSGSSKGGLFNDVQIS-GHFVHRTRFSRTSGRSFLPPQCRTD 137

Query:   143 DLLYVSDPCEHPMGNKEDDLGIFRGVFRGFLKSTTRACLIXXXXXXXXXXKCPYCGARVW 202
             D+LYVSDPCEH    ++ DLG FRG+F+ F  S  R  LI           CPYC A++W
Sbjct:   138 DILYVSDPCEHLDQGEDGDLGFFRGIFKSFSMSKVRKLLIKKGTPFHPTEVCPYCKAKLW 197

Query:   203 SMTAARLVPKSAARRLGSHDGGLEYFVCINGHLHGSCWLVPLS 245
             SM  A+++P+SA+ RLG+++  +EY+VC+NGH+ G C L+PLS
Sbjct:   198 SMLQAKMIPQSASCRLGAYEDSIEYYVCLNGHMLGVCTLLPLS 240


>TAIR|locus:2133259 [details] [associations]
            symbol:EID1 "EMPFINDLICHER IM DUNKELROTEN LICHT 1"
            species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
            evidence=ISM;IDA] [GO:0009585 "red, far-red light
            phototransduction" evidence=IMP] [GO:0004842 "ubiquitin-protein
            ligase activity" evidence=ISS] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0010099 "regulation of photomorphogenesis"
            evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
            [GO:0048573 "photoperiodism, flowering" evidence=RCA;IMP]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=RCA] [GO:0032880 "regulation of protein localization"
            evidence=RCA] [GO:0042752 "regulation of circadian rhythm"
            evidence=RCA] PROSITE:PS50181 UniPathway:UPA00143 GO:GO:0005634
            EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009585 GO:GO:0048573
            GO:GO:0048366 GO:GO:0004842 GO:GO:0010099 EMBL:AL161494
            EMBL:AF069298 EMBL:BT002038 EMBL:BT008731 EMBL:AK229833
            EMBL:AY085530 IPI:IPI00516571 PIR:T01306 RefSeq:NP_192153.1
            UniGene:At.3886 UniGene:At.43977 ProteinModelPortal:Q8LEA8
            IntAct:Q8LEA8 STRING:Q8LEA8 PaxDb:Q8LEA8 PRIDE:Q8LEA8
            EnsemblPlants:AT4G02440.1 GeneID:828008 KEGG:ath:AT4G02440
            TAIR:At4g02440 eggNOG:NOG256353 HOGENOM:HOG000030777
            InParanoid:Q8LEA8 OMA:WSLYDDL PhylomeDB:Q8LEA8
            ProtClustDB:CLSN2685743 Genevestigator:Q8LEA8 GermOnline:AT4G02440
            Uniprot:Q8LEA8
        Length = 336

 Score = 130 (50.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
 Identities = 38/140 (27%), Positives = 63/140 (45%)

Query:   112 KVSKASPAHFVQAS-RFSKTSGRSFLTKKCRGDLLYVSD-P-CEHPMGNKEDDLGIFRGV 168
             K+ ++  +H        S+  G   L  + RGD LY+ + P C H +  K + + +FRGV
Sbjct:   201 KICRSLGSHLASGGWNLSREQGNKLLASRFRGDCLYICNWPGCIH-VEEKRNYM-LFRGV 258

Query:   169 FRGFLKSTTRACLIXXXXXXXXXXKCPYCGA-RVWSMTAARLVPKSAARRLGSHDGG--- 224
             F+ F +S     +           KC +C     W + ++  +     R  G HD G   
Sbjct:   259 FKDFKRSRVWRTINDGNRSKTSGLKCAFCLCDETWDLHSSFCL----RRVFGFHDDGEPV 314

Query:   225 LEYFVCINGHLHGSCWLVPL 244
             +  +VC NGH+ G+   +PL
Sbjct:   315 VRAYVCENGHVSGAWTALPL 334

 Score = 40 (19.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
 Identities = 8/14 (57%), Positives = 9/14 (64%)

Query:    90 GGWHALAKLMFHCC 103
             GGW +L KL   CC
Sbjct:    87 GGWASLYKLAV-CC 99


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.138   0.454    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      296       255   0.00085  114 3  11 22  0.40    33
                                                     32  0.48    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  612 (65 KB)
  Total size of DFA:  221 KB (2121 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.14u 0.12s 18.26t   Elapsed:  00:00:01
  Total cpu time:  18.14u 0.12s 18.26t   Elapsed:  00:00:01
  Start:  Fri May 10 01:16:16 2013   End:  Fri May 10 01:16:17 2013

Back to top