Query 022475
Match_columns 296
No_of_seqs 132 out of 1212
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 06:04:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022475.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022475hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3otx_A Adenosine kinase, putat 100.0 1.3E-50 4.5E-55 356.4 32.5 295 2-296 50-346 (347)
2 3loo_A Anopheles gambiae adeno 100.0 7E-51 2.4E-55 360.3 29.3 295 2-296 66-362 (365)
3 3vas_A Putative adenosine kina 100.0 2.4E-50 8.3E-55 357.2 29.4 295 2-296 67-365 (370)
4 3uq6_A Adenosine kinase, putat 100.0 9.7E-50 3.3E-54 353.7 29.1 296 1-296 68-367 (372)
5 1bx4_A Protein (adenosine kina 100.0 2.6E-47 9E-52 335.1 30.7 293 4-296 51-345 (345)
6 2abs_A Adenosine kinase, AK; r 100.0 1.4E-45 4.9E-50 328.3 28.0 280 7-290 79-377 (383)
7 4e3a_A Sugar kinase protein; s 100.0 2.1E-44 7.2E-49 317.0 25.0 260 10-290 74-339 (352)
8 3ry7_A Ribokinase; transferase 100.0 5.1E-45 1.8E-49 315.2 17.1 266 7-295 31-301 (304)
9 4du5_A PFKB; structural genomi 100.0 5.7E-44 1.9E-48 312.6 23.3 271 4-295 46-331 (336)
10 3lhx_A Ketodeoxygluconokinase; 100.0 5.9E-44 2E-48 310.5 18.8 271 7-293 20-308 (319)
11 3hj6_A Fructokinase, FRK; fruc 100.0 2.9E-44 1E-48 313.4 15.8 268 8-296 46-322 (327)
12 3ktn_A Carbohydrate kinase, PF 100.0 6.2E-44 2.1E-48 313.8 17.7 277 4-294 22-324 (346)
13 1rkd_A Ribokinase; carbohydrat 100.0 1.3E-43 4.6E-48 307.0 18.4 266 7-295 32-301 (309)
14 4e69_A 2-dehydro-3-deoxyglucon 100.0 1.1E-42 3.8E-47 303.4 24.0 266 9-292 43-320 (328)
15 3ljs_A Fructokinase; fructokia 100.0 8.7E-44 3E-48 311.9 16.5 268 9-295 29-322 (338)
16 3h49_A Ribokinase; transferase 100.0 1.5E-42 5.1E-47 302.4 24.1 265 9-295 36-308 (325)
17 2fv7_A Ribokinase; structural 100.0 2.2E-43 7.4E-48 308.4 18.5 267 8-296 53-327 (331)
18 3iq0_A Putative ribokinase II; 100.0 2.3E-43 7.9E-48 308.1 18.2 263 12-295 33-306 (330)
19 3umo_A 6-phosphofructokinase i 100.0 9.9E-43 3.4E-47 301.5 20.9 268 4-295 26-300 (309)
20 2rbc_A Sugar kinase, AGR_C_456 100.0 6.8E-43 2.3E-47 306.4 19.7 257 8-295 58-322 (343)
21 3pl2_A Sugar kinase, ribokinas 100.0 2.3E-42 8E-47 300.5 23.0 267 7-295 32-311 (319)
22 2v78_A Fructokinase; transfera 100.0 1.1E-42 3.7E-47 301.8 19.2 265 5-294 22-303 (313)
23 3kzh_A Probable sugar kinase; 100.0 1.7E-42 5.9E-47 302.3 18.9 261 10-293 36-301 (328)
24 2qcv_A Putative 5-dehydro-2-de 100.0 2E-41 6.9E-46 296.2 25.6 268 9-294 37-318 (332)
25 2dcn_A Hypothetical fructokina 100.0 2.7E-42 9.1E-47 299.1 19.4 263 6-294 23-301 (311)
26 3ikh_A Carbohydrate kinase; tr 100.0 7.1E-43 2.4E-47 301.0 15.6 247 8-295 31-282 (299)
27 2jg1_A Tagatose-6-phosphate ki 100.0 5E-42 1.7E-46 299.6 20.5 267 5-295 45-318 (330)
28 2nwh_A AGR_C_3442P, carbohydra 100.0 5.7E-42 1.9E-46 297.7 20.2 262 11-294 34-300 (317)
29 3ie7_A LIN2199 protein; phosph 100.0 3.9E-42 1.3E-46 299.2 17.7 264 3-295 26-297 (320)
30 3cqd_A 6-phosphofructokinase i 100.0 1E-41 3.6E-46 295.1 19.9 266 4-294 26-299 (309)
31 1v1a_A 2-keto-3-deoxygluconate 100.0 2E-41 6.9E-46 293.3 21.5 261 6-294 23-296 (309)
32 4e84_A D-beta-D-heptose 7-phos 100.0 3.5E-42 1.2E-46 302.7 16.9 262 9-295 87-350 (352)
33 1vm7_A Ribokinase; TM0960, str 100.0 2.1E-41 7.3E-46 293.2 20.9 260 5-295 40-304 (311)
34 2c4e_A Sugar kinase MJ0406; tr 100.0 1.9E-41 6.3E-46 292.6 20.3 255 7-294 33-292 (302)
35 3ewm_A Uncharacterized sugar k 100.0 4.1E-41 1.4E-45 291.9 21.7 261 5-295 22-294 (313)
36 3go6_A Ribokinase RBSK; phosph 100.0 8E-42 2.8E-46 295.6 16.6 246 6-295 46-298 (310)
37 2afb_A 2-keto-3-deoxygluconate 100.0 2.6E-41 8.8E-46 297.6 19.7 275 5-294 33-336 (351)
38 1tyy_A Putative sugar kinase; 100.0 5.4E-42 1.9E-46 300.4 14.4 263 9-294 43-322 (339)
39 2f02_A Tagatose-6-phosphate ki 100.0 6.4E-41 2.2E-45 291.8 20.5 267 4-294 26-300 (323)
40 2abq_A Fructose 1-phosphate ki 100.0 6.1E-41 2.1E-45 289.9 18.8 263 5-294 25-290 (306)
41 4gm6_A PFKB family carbohydrat 100.0 7.4E-41 2.5E-45 294.8 18.5 274 5-288 45-330 (351)
42 2qhp_A Fructokinase; NP_810670 100.0 2.3E-40 7.8E-45 285.0 20.2 260 12-291 20-287 (296)
43 2jg5_A Fructose 1-phosphate ki 100.0 1.1E-40 3.7E-45 288.4 17.7 262 4-294 24-290 (306)
44 2ajr_A Sugar kinase, PFKB fami 100.0 1.7E-41 6E-46 296.3 12.8 261 9-294 44-317 (331)
45 2hlz_A Ketohexokinase; non-pro 100.0 1.2E-39 3.9E-44 282.5 22.4 250 9-287 47-308 (312)
46 3b1n_A Ribokinase, putative; r 100.0 9.6E-40 3.3E-44 284.6 21.9 254 9-294 40-298 (326)
47 2pkf_A Adenosine kinase; trans 100.0 8E-40 2.7E-44 286.1 19.4 258 9-294 50-312 (334)
48 3kd6_A Carbohydrate kinase, PF 100.0 3.7E-39 1.3E-43 279.5 22.5 257 10-295 22-291 (313)
49 1vk4_A PFKB carbohydrate kinas 100.0 3.1E-40 1.1E-44 284.3 13.1 261 2-295 22-292 (298)
50 3bf5_A Ribokinase related prot 100.0 6.2E-39 2.1E-43 277.0 15.5 241 8-294 48-293 (306)
51 2yxt_A Pyridoxal kinase; beta 99.9 3.5E-26 1.2E-30 197.8 8.9 219 35-284 12-269 (312)
52 2ddm_A Pyridoxine kinase; pyri 99.9 5.5E-25 1.9E-29 187.7 14.0 226 34-286 21-268 (283)
53 1jxh_A Phosphomethylpyrimidine 99.9 3.7E-24 1.3E-28 183.0 10.7 162 112-285 94-269 (288)
54 1ub0_A THID, phosphomethylpyri 99.9 1.1E-22 3.8E-27 171.1 14.2 162 112-285 70-244 (258)
55 2i5b_A Phosphomethylpyrimidine 99.9 2.5E-21 8.4E-26 164.0 13.4 162 112-285 74-250 (271)
56 3pzs_A PM kinase, pyridoxamine 99.8 2.9E-20 9.8E-25 158.7 11.9 165 111-285 76-260 (289)
57 3h74_A Pyridoxal kinase; PSI-I 99.8 1.9E-19 6.7E-24 152.8 15.5 162 112-285 74-249 (282)
58 3mbh_A Putative phosphomethylp 99.8 6.1E-19 2.1E-23 150.5 12.8 161 112-285 77-259 (291)
59 3zs7_A Pyridoxal kinase; trans 99.8 1.3E-18 4.3E-23 149.0 12.2 162 111-284 75-261 (300)
60 1ekq_A Hydroxyethylthiazole ki 99.7 1E-16 3.5E-21 135.3 11.8 159 107-276 53-223 (272)
61 3rm5_A Hydroxymethylpyrimidine 99.6 4.3E-15 1.5E-19 137.1 12.2 159 112-283 91-274 (550)
62 1v8a_A Hydroxyethylthiazole ki 99.4 5E-12 1.7E-16 106.0 12.4 162 106-281 50-224 (265)
63 2r3b_A YJEF-related protein; p 99.1 5.6E-10 1.9E-14 95.3 10.1 154 108-283 107-267 (310)
64 3bgk_A SMU.573, putative uncha 99.1 2.9E-10 9.8E-15 97.2 7.8 157 108-283 121-284 (311)
65 3dzv_A 4-methyl-5-(beta-hydrox 99.0 5.3E-09 1.8E-13 87.3 13.6 164 105-280 51-232 (273)
66 3rss_A Putative uncharacterize 98.9 1.6E-08 5.6E-13 91.7 11.7 158 107-283 315-475 (502)
67 3rpz_A ADP/ATP-dependent NAD(P 98.8 7.9E-09 2.7E-13 86.7 7.1 147 110-276 96-244 (279)
68 3drw_A ADP-specific phosphofru 98.7 4.9E-07 1.7E-11 80.4 15.9 76 111-186 235-321 (474)
69 3nl6_A Thiamine biosynthetic b 98.5 3.1E-06 1E-10 77.5 14.8 162 105-277 298-495 (540)
70 1ua4_A Glucokinase, ADP-depend 98.4 5.6E-06 1.9E-10 73.8 14.4 163 14-185 109-303 (455)
71 3hpd_A Hydroxyethylthiazole ki 98.4 4.8E-06 1.6E-10 68.9 12.9 159 106-278 50-221 (265)
72 1gc5_A ADP-dependent glucokina 98.2 4.4E-05 1.5E-09 68.0 16.2 163 14-185 117-316 (467)
73 1l2l_A ADP-dependent glucokina 98.2 1.4E-05 4.7E-10 71.1 11.7 73 111-184 227-305 (457)
74 3k5w_A Carbohydrate kinase; 11 97.9 0.0001 3.6E-09 66.2 11.1 151 111-283 291-447 (475)
75 2l82_A Designed protein OR32; 59.3 40 0.0014 23.1 6.9 67 105-177 70-139 (162)
76 2orv_A Thymidine kinase; TP4A 48.8 1E+02 0.0034 24.6 10.1 62 108-172 86-147 (234)
77 2l82_A Designed protein OR32; 45.9 69 0.0024 21.9 7.6 52 125-177 10-62 (162)
78 2fcj_A Small toprim domain pro 44.0 49 0.0017 23.3 5.3 77 112-200 26-102 (119)
79 3can_A Pyruvate-formate lyase- 42.2 36 0.0012 25.4 4.9 65 114-182 5-74 (182)
80 3vzx_A Heptaprenylglyceryl pho 42.0 60 0.002 25.7 6.1 51 111-172 30-80 (228)
81 2j9r_A Thymidine kinase; TK1, 38.5 1.4E+02 0.0048 23.3 8.4 59 112-172 101-159 (214)
82 4f3y_A DHPR, dihydrodipicolina 37.9 68 0.0023 26.1 6.1 60 108-174 69-129 (272)
83 2fq6_A Cystathionine beta-lyas 35.2 95 0.0033 26.8 7.0 38 112-149 167-207 (415)
84 3ctl_A D-allulose-6-phosphate 32.0 45 0.0015 26.4 4.0 53 111-172 79-133 (231)
85 3inp_A D-ribulose-phosphate 3- 31.2 34 0.0012 27.5 3.1 52 111-172 108-161 (246)
86 3nmy_A Xometc, cystathionine g 30.9 1.2E+02 0.004 26.0 6.8 38 112-149 152-190 (400)
87 1ztd_A Hypothetical protein PF 30.2 41 0.0014 23.1 2.8 31 243-273 63-94 (133)
88 3jzl_A Putative cystathionine 30.1 1.3E+02 0.0043 26.1 6.9 38 112-149 159-203 (409)
89 3ndn_A O-succinylhomoserine su 29.0 1.1E+02 0.0039 26.3 6.4 38 112-149 166-204 (414)
90 3w01_A Heptaprenylglyceryl pho 28.8 1.2E+02 0.004 24.2 5.8 51 111-172 35-85 (235)
91 1tqx_A D-ribulose-5-phosphate 28.2 1E+02 0.0035 24.2 5.5 52 112-172 85-143 (227)
92 3ri6_A O-acetylhomoserine sulf 27.1 1.3E+02 0.0045 26.1 6.5 37 112-148 167-204 (430)
93 3ijp_A DHPR, dihydrodipicolina 26.9 1.5E+02 0.0052 24.3 6.4 60 108-174 84-144 (288)
94 3ovp_A Ribulose-phosphate 3-ep 25.9 62 0.0021 25.5 3.8 52 111-172 86-139 (228)
95 2re1_A Aspartokinase, alpha an 25.9 78 0.0027 23.4 4.2 33 35-67 24-59 (167)
96 1dih_A Dihydrodipicolinate red 25.8 1.4E+02 0.0048 24.2 6.0 58 109-174 69-128 (273)
97 3hl2_A O-phosphoseryl-tRNA(SEC 25.7 3.6E+02 0.012 24.1 9.3 112 11-148 137-253 (501)
98 1f6y_A 5-methyltetrahydrofolat 24.8 2.3E+02 0.0079 22.7 7.1 60 111-174 37-99 (262)
99 3qhx_A Cystathionine gamma-syn 24.6 1.2E+02 0.004 25.8 5.6 37 112-148 151-188 (392)
100 3kbq_A Protein TA0487; structu 24.6 82 0.0028 23.7 4.0 35 21-57 24-58 (172)
101 3lxu_X Tripeptidyl-peptidase 2 24.3 14 0.00047 37.4 -0.4 55 197-258 25-83 (1354)
102 3v7e_A Ribosome-associated pro 22.9 1.2E+02 0.0041 19.4 4.1 35 111-148 26-60 (82)
103 2dtj_A Aspartokinase; protein- 22.9 1.8E+02 0.0061 21.6 5.8 32 35-66 14-48 (178)
104 2yci_X 5-methyltetrahydrofolat 22.3 1.8E+02 0.0063 23.5 6.1 61 111-175 46-109 (271)
105 1tqj_A Ribulose-phosphate 3-ep 22.3 94 0.0032 24.4 4.2 54 111-172 84-139 (230)
106 3o1n_A 3-dehydroquinate dehydr 21.6 2.3E+02 0.0077 23.0 6.5 58 113-173 134-195 (276)
107 4go7_X Aspartokinase; transfer 21.5 1.5E+02 0.0052 22.8 5.1 31 37-67 39-69 (200)
108 3s1t_A Aspartokinase; ACT doma 21.4 1.8E+02 0.0061 21.8 5.5 27 40-66 23-49 (181)
109 1w4r_A Thymidine kinase; type 21.3 1.1E+02 0.0038 23.5 4.2 63 106-172 85-148 (195)
110 2dha_A FLJ20171 protein; RRM d 20.2 2.2E+02 0.0076 19.6 5.7 64 14-80 6-76 (123)
111 3tz6_A Aspartate-semialdehyde 20.1 3.9E+02 0.013 22.4 9.3 89 39-151 4-96 (344)
112 3vk5_A MOEO5; TIM barrel, tran 20.0 1.5E+02 0.0052 24.3 5.0 50 111-172 65-121 (286)
No 1
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=100.00 E-value=1.3e-50 Score=356.40 Aligned_cols=295 Identities=40% Similarity=0.748 Sum_probs=257.2
Q ss_pred hHhhhcCCCceeecCChhHHHHHHHHHhhcC-CCc-EEEEEeecCCchhHHHHHHHHhcCCceeEEecCCCCceeEEEEE
Q 022475 2 YDELASKENVEYIAGGATQNSIKVAQWMLQI-PGA-TSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCV 79 (296)
Q Consensus 2 ~~~~~~~~~~~~~~GG~~~n~a~~~~~l~~l-g~~-v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~ 79 (296)
++++.+..+.+..+||++.|+|+++++|.++ |.+ +.++|.||+|.+|+.+++.|++.||++++++.++.+|+.+++++
T Consensus 50 ~~~~~~~~~~~~~~GG~~~N~a~~la~L~~~~G~~~~~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~T~~~~i~~ 129 (347)
T 3otx_A 50 FDDIEKMPNVRYVPGGSGLNVARVAQWMQQAYKGKFVTYVGCIADDRYGKVLKEAAEHEGIVMAVEHTTKAGSGACAVCI 129 (347)
T ss_dssp HHHHHTSTTCEEEECCHHHHHHHHHHHTTGGGTTSSEEEECEECSSHHHHHHHHHHHHHTCEECCEECSSSCEEEEEEEE
T ss_pred HHHHhccCCeEEecCCHHHHHHHHHHHhcccCCCCeEEEEEEecCChHHHHHHHHHHHCCCceecccCCCCCCeEEEEEE
Confidence 4667777889999999999999999984322 588 99999999999999999999999999999877778999999998
Q ss_pred eCCeeceeeccccccccCccccCChhhhhhhhcceEEEEeccccccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhH
Q 022475 80 VGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFRE 159 (296)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 159 (296)
++++|+++.+.+++..++++++.....++.+.+++++|++|+.+..+++.+..+++.++++|+++++|++.+.|...+.+
T Consensus 130 ~~g~r~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~ 209 (347)
T 3otx_A 130 TGKERTLVADLGAANHLSSEHMRSPAVVRAMDESRIFYFSGFTLTVDVNHVLQACRKAREVDGLFMINLSAPFIMQFFSA 209 (347)
T ss_dssp ETTEEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSEEEEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHH
T ss_pred ECCceeeeechhhhhcCCHHHcCchhhHHHHhhCCEEEEeeeecccCHHHHHHHHHHHHHhCCEEEeeCchhhhHHHHHH
Confidence 88999998888888888888877644456789999999999988788899999999999999999999988887777788
Q ss_pred HHHhhcCCCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecccCC
Q 022475 160 PQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLP 239 (296)
Q Consensus 160 ~~~~~l~~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~ 239 (296)
.+.++++++|++++|++|++.+++....+.++++++++.+.++++....+++.+|+|+|++|++++++++.+++|+++++
T Consensus 210 ~l~~~l~~~dil~~N~~Ea~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~ 289 (347)
T 3otx_A 210 QLGEVLPYTDIIVANRHEAKEFANMMKWDTDCVEEIARRAVSEVPYTGTKGRVVVFTRDIESTVLATKDGVETVPVPQLD 289 (347)
T ss_dssp HHHHHGGGCSEEEEEHHHHHHHHHHHTCCCCCHHHHHHHHHHTSCCCCSSCCEEEEEETTEEEEEEETTEEEEECCCCCC
T ss_pred HHHHHHhhCCEEecCHHHHHHHhcccCCCcCCHHHHHHHHHhhhccccCCCCEEEEEeCCCCeEEEECCeEEEEEecccC
Confidence 89999999999999999999999876666678999999986442112478899999999999999999999999887765
Q ss_pred CccccCCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccCCCCCCCCCC
Q 022475 240 KEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEFN 296 (296)
Q Consensus 240 ~~~vvd~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~~~~~~~~~~ 296 (296)
..++||||||||+|+|||+++|++|+++++|+++|+++|+.++++.|+++|.++++.
T Consensus 290 ~~~vvDttGAGDaF~ag~l~~l~~g~~l~~a~~~a~~~aa~~v~~~G~~~p~~~~~~ 346 (347)
T 3otx_A 290 QDKVIDMNGAGDAFMGGFLSAYAVGKDLRRCCETGHYTAQEVIQRDGCSFPEKPSFS 346 (347)
T ss_dssp GGGCCSSCCSHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHTCC----CCSCSCC
T ss_pred CCCCCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcccCCCCCCCCCCC
Confidence 568999999999999999999999999999999999999999999999999988763
No 2
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=100.00 E-value=7e-51 Score=360.25 Aligned_cols=295 Identities=49% Similarity=0.865 Sum_probs=254.4
Q ss_pred hHhhhcCCCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEecCCCCceeEEEEEeC
Q 022475 2 YDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVG 81 (296)
Q Consensus 2 ~~~~~~~~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~ 81 (296)
++++.+..+.+..+||++.|+|+++++|.++|.++.++|.||+|.+|+.+++.|++.||++++++.++.+|+.+++++++
T Consensus 66 ~~e~~~~~~~~~~~GG~~~N~a~~~~~L~~lG~~~~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~Tg~~~i~~~~ 145 (365)
T 3loo_A 66 YQELIEKYQAEYIAGGSVQNSLRVAQWILQRPRTAIFFGCVGQDEYARILEERATSNGVNVQYQRSATSPTGTCAVLVTG 145 (365)
T ss_dssp HHHHHHHHCCEEEEECHHHHHHHHHHHHHTCTTSEEEEEEEESBHHHHHHHHHHHHHTCEEEEEEESSSCCEEEEEEEET
T ss_pred HHHHhhcCCeEEecCCHHHHHHHHHHHhhcCCCcEEEEEEecCCchHHHHHHHHHHCCCceeccccCCCCCeEEEEEEEC
Confidence 34555556788999999999999999877778999999999999999999999999999999987677899999999988
Q ss_pred CeeceeeccccccccCccccCChhhhhhhhcceEEEEeccccccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHH
Q 022475 82 GERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQ 161 (296)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 161 (296)
++|+++.+.+++..++++++......+.+.++|++|++|+.+..+++.+..+++.++++|+++++|++.+.|.....+.+
T Consensus 146 ~~r~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~v~i~G~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l 225 (365)
T 3loo_A 146 TQRSLCANLAAANDFTPEHLRSDGNRAYLQGAQFFYVSGFFFTVSFESALSVAKEAAATGRMFMMNLSAPFVPQFYKNNL 225 (365)
T ss_dssp TEEEEEEECGGGGGCCGGGGGSHHHHHHHHHCSEEEEEGGGHHHHHHHHHHHHHHHHHTTCEEEEECCSTHHHHHCHHHH
T ss_pred CceEEEeccchHhhCCHhHcCchhhHHHHhhCCEEEEeeeeccCCHHHHHHHHHHHHHcCCEEEEECCchhhhHHHHHHH
Confidence 88988888888888988887654445678899999999988777788899999999999999999998888877778889
Q ss_pred HhhcCCCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEE--ECCeEEEEecccCC
Q 022475 162 EKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVA--EDGKVKLFPVILLP 239 (296)
Q Consensus 162 ~~~l~~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~--~~~~~~~~~~~~~~ 239 (296)
..+++++|++++|++|++.+++....+.++++++++.+.++++....+++.+|||+|++|++++ ++++.+++|+++++
T Consensus 226 ~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~v~ 305 (365)
T 3loo_A 226 EEIFPYVDVLFGNETEAIALAKEFNYGTEDLREIGKRIAALPKENGKRKRIVIITQGSDPVLLIEAGTDNVREFPVQKLA 305 (365)
T ss_dssp HHHGGGCSEEEEEHHHHHHHHHHTTCCCCCHHHHHHHHHTSCCSSTTSCCEEEEEETTEEEEEEETTCSCCEEECCCCCC
T ss_pred HHHHHhCCEEecCHHHHHHHhcccCCCCCCHHHHHHHHHhhhhhccCCCCEEEEEeCCCCEEEEEecCCeEEEEeccccC
Confidence 9999999999999999999998766667889999999964321122478999999999999999 78888888887764
Q ss_pred CccccCCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccCCCCCCCCCC
Q 022475 240 KEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEFN 296 (296)
Q Consensus 240 ~~~vvd~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~~~~~~~~~~ 296 (296)
..++||||||||+|+|||+++|++|+++++|+++|+++|+.++++.|+.+|..++|+
T Consensus 306 ~~~vvDttGAGDaF~agfl~~l~~g~~l~~a~~~a~~~Aa~~v~~~G~~~p~~~~~~ 362 (365)
T 3loo_A 306 PEQMVDTNGAGDAFVGGFLAQLLQSRTVDVCIKCGIWAAREIIQRSGCTFEGEPSFC 362 (365)
T ss_dssp ------CTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHGGGGGGSCCCC-
T ss_pred CCCccCCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHcCCCCCCCCCccCC
Confidence 448999999999999999999999999999999999999999999999999988874
No 3
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=100.00 E-value=2.4e-50 Score=357.18 Aligned_cols=295 Identities=38% Similarity=0.678 Sum_probs=259.6
Q ss_pred hHhhhcCCCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEec-CCCCceeEEEEEe
Q 022475 2 YDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYED-ESAPTGTCAVCVV 80 (296)
Q Consensus 2 ~~~~~~~~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~-~~~~t~~~~~~~~ 80 (296)
++++.+..+.+..+||++.|+|+++++|++.|.++.++|.||+|.+|+.+++.|+++||++++++. ++.+|+.++++++
T Consensus 67 ~ge~~~~~~~~~~~GG~~~N~A~~la~L~~~G~~~~~ig~vG~D~~G~~~~~~L~~~GV~~~~~~~~~~~~Tg~~~i~v~ 146 (370)
T 3vas_A 67 YDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCSYVGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS 146 (370)
T ss_dssp HHHHTTSSSCEEEEECHHHHHHHHHHHHHCCTTCEEEEEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC
T ss_pred HHHHhhcCCeEEecCCHHHHHHHHHHHhcCCCCcEEEEEEEcCChhHHHHHHHHHHcCCcccccccCCCCCceEEEEEEe
Confidence 456667788999999999999999998655579999999999999999999999999999999875 7789999999998
Q ss_pred CCeeceeeccccccccCccccCChhhhhhhhcceEEEEeccccccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHH
Q 022475 81 GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREP 160 (296)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 160 (296)
+|+|+++.+.+++..++++++......+.+.++|++|++|+.+.++++.+..+++.++++|+++++|++.+.|.....+.
T Consensus 147 ~g~rt~~~~~ga~~~l~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~a~~~g~~v~ld~~~~~~~~~~~~~ 226 (370)
T 3vas_A 147 EKLRSMVTYLGAACDLSLAHIEQPHVWSLVEKAQVYYIAGFVINTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKE 226 (370)
T ss_dssp SSCEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSEEEEEGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHH
T ss_pred CCceeEEEccchhhhCCHHHcCchhhHHHHhhCCEEEEEeeeccCCHHHHHHHHHHHHHcCCEEEEECCcHHHHHHHHHH
Confidence 88999988888888888888776444567889999999998877778899999999999999999999888887777888
Q ss_pred HHhhcCCCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCC-CceEEEEeeCCCcEEEEE--CCeEEEEeccc
Q 022475 161 QEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGT-HKRITVITQGADPVVVAE--DGKVKLFPVIL 237 (296)
Q Consensus 161 ~~~~l~~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~-g~~~vvvt~G~~G~~~~~--~~~~~~~~~~~ 237 (296)
+.++++++|++++|++|++.|++....+.++++++++.+.++++.... +++.||||+|++|+++++ +++.+++|+++
T Consensus 227 l~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~ 306 (370)
T 3vas_A 227 VDEMISYSNIVFGNESEAEAYGEVHGLLEDTVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQ 306 (370)
T ss_dssp HHHHHTTCSEEEEEHHHHHHHHHHTTCCSSHHHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEETTCSSCEEECCCC
T ss_pred HHHHHhhCCEEEcCHHHHHHHhcccCCCccCHHHHHHHHHhhcccccccCCCEEEEecCCCceEEEEcCCCeEEEEeccc
Confidence 999999999999999999999987665567889999988643111113 789999999999999999 88889998877
Q ss_pred CCCccccCCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccCCCCCCCCCC
Q 022475 238 LPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEFN 296 (296)
Q Consensus 238 ~~~~~vvd~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~~~~~~~~~~ 296 (296)
++..+++|||||||+|+|||+++|++|+++++|+++|+++|+.++++.|+.+|++++++
T Consensus 307 v~~~~vvDttGAGDaF~ag~l~~l~~g~~l~~a~~~A~aaAa~~v~~~G~~~p~~~~~~ 365 (370)
T 3vas_A 307 FKDDQIIDTNGAGDAFAAGFIADYIRGKPMITSLHAAVKAAAYIICRSGFSLGSRDSYS 365 (370)
T ss_dssp CCTTTCSCCTTHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHTSSSSCCCCGGGGC
T ss_pred ccCCCcCCCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHcccCCcCCCCccce
Confidence 65558999999999999999999999999999999999999999999999999988764
No 4
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=100.00 E-value=9.7e-50 Score=353.68 Aligned_cols=296 Identities=36% Similarity=0.665 Sum_probs=258.5
Q ss_pred ChHhhhcCCCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEe-cCCCCceeEEEEE
Q 022475 1 MYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCV 79 (296)
Q Consensus 1 ~~~~~~~~~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~ 79 (296)
+|+++....+.+..+||++.|+|+++++|.+.+..|.|+|.||+|.+|+.+++.|++.||+++++. .++.+|+.+++++
T Consensus 68 ~~~~~~~~~~~~~~~GGsa~N~a~~la~LG~~~~~~~fiG~VG~D~~G~~l~~~L~~~GV~~~~~~~~~~~~T~~~~v~~ 147 (372)
T 3uq6_A 68 IYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCSYVGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLV 147 (372)
T ss_dssp HHHHHHTSSSCEEEECCHHHHHHHHHHHHHCSTTSEEEEEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEE
T ss_pred HHHHHhccCCeEEeCCcHHHHHHHHHHHcCCCCCcEEEEeeecCCHHHHHHHHHHHHcCCCceeeeecCCCCceEEEEEc
Confidence 367788888889999999999999999976656779999999999999999999999999999885 5666888998888
Q ss_pred eCCeeceeeccccccccCccccCChhhhhhhhcceEEEEeccccccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhH
Q 022475 80 VGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFRE 159 (296)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 159 (296)
++++|+++.+.+++..++++++..+..+..+..++++|++|+.....++.+..+++.++++++++++|++.+++....++
T Consensus 148 ~dgert~~~~~ga~~~l~~~~i~~~~~~~~i~~a~~~~~~g~~~~~~~~~~~~~~~~a~~~g~~v~ldls~~~~~~~~~~ 227 (372)
T 3uq6_A 148 SEKLRSMVTYLGAACDLSLAHIEQPHVWSLVEKAQVYYIAGFVINTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTK 227 (372)
T ss_dssp CSSCEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSEEEEEGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHH
T ss_pred CCCceEEEEeccchhhcchhhhhhhhHHHHhhcccEEEEecccccccHHHHHHHHHHHHHcCCeEeeccccchhhhhhHH
Confidence 89999999999999999999888766667789999999999887666788889999999999999999998887777888
Q ss_pred HHHhhcCCCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCC-CCCCCceEEEEeeCCCcEEEEECCe--EEEEecc
Q 022475 160 PQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPK-ASGTHKRITVITQGADPVVVAEDGK--VKLFPVI 236 (296)
Q Consensus 160 ~~~~~l~~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~-~~~~g~~~vvvt~G~~G~~~~~~~~--~~~~~~~ 236 (296)
.+.++++++|++++|++|++.|++......++.+++++.+.++.. ....+.+.+|+|+|++|+++++++. ...++.+
T Consensus 228 ~l~~ll~~~Dil~~Ne~Ea~~l~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~v~ 307 (372)
T 3uq6_A 228 EVDEMISYSNIVFGNESEAEAYGEVHGLLEDTVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVE 307 (372)
T ss_dssp HHHHHHTTCSEEEEEHHHHHHHHHHTTCCSSHHHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEESSCSSCEEECCC
T ss_pred HHHHHhhcCCcccCCHHHHHHHhCCCCCchhHHHHHHHHHhhhhhhhhcCCceEEEEcCCCCceEEecCCCceeeeeecc
Confidence 899999999999999999999998877767788888888765432 1235678899999999999987664 3455555
Q ss_pred cCCCccccCCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccCCCCCCCCCC
Q 022475 237 LLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEFN 296 (296)
Q Consensus 237 ~~~~~~vvd~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~~~~~~~~~~ 296 (296)
+.+..++||||||||+|+|||+++|++|+++++|+++|+.+|+.++++.|+++|.+++++
T Consensus 308 ~~~~~~vVDTtGAGDaF~agfl~~l~~g~~l~~a~~~a~~aAa~vv~~~Ga~lp~r~~~~ 367 (372)
T 3uq6_A 308 QFKDDQIIDTNGAGDAFAAGFIADYIRGKPMITSLHAAVKAAAYIICRSGFSLGSRDSYS 367 (372)
T ss_dssp CCCGGGCCCCTTHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHTSSSSCCCCGGGCC
T ss_pred CCCCCceeCCCchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCCCCCCChhHHH
Confidence 555668999999999999999999999999999999999999999999999999988764
No 5
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=100.00 E-value=2.6e-47 Score=335.15 Aligned_cols=293 Identities=55% Similarity=0.993 Sum_probs=248.9
Q ss_pred hhhcCCCceeecCChhHHHHHHHHHhhcCC-CcEEEEEeecCCchhHHHHHHHHhcCCceeEEecCCCCceeEEEEEeCC
Q 022475 4 ELASKENVEYIAGGATQNSIKVAQWMLQIP-GATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGG 82 (296)
Q Consensus 4 ~~~~~~~~~~~~GG~~~n~a~~~~~l~~lg-~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~~ 82 (296)
++.+..+....+||++.|+|+++++|.+.+ .++.++|.||+|.+|+.+++.|+++||+++++..++.+|+.++++++++
T Consensus 51 ~~~~~~~~~~~~GG~~~NvA~~la~lgg~~~~~~~~ig~vG~D~~G~~i~~~L~~~gv~~~~v~~~~~~T~~~~~~~~~g 130 (345)
T 1bx4_A 51 ELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACITGD 130 (345)
T ss_dssp HHHHHSCCEEEEECHHHHHHHHHHHHHCSSTTCEEEEEEEESSHHHHHHHHHHHHTTCEEEEEEESSSCCCEEEEEEETT
T ss_pred HHhccCCceecCCcHHHHHHHHHHHhcCCCCCcEEEEEEeCCChhHHHHHHHHHHcCCceeeeecCCCCCceEEEEEcCC
Confidence 444556888999999999999999853322 7999999999999999999999999999999876777999999998888
Q ss_pred eeceeeccccccccCcc-ccCChhhhhhhhcceEEEEeccccccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHH
Q 022475 83 ERSLVANLSAANCYKSE-HLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQ 161 (296)
Q Consensus 83 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 161 (296)
+|+++.+.+++..++++ ++......+.+.++|++|++|+.+..+++.+..+++.+++.++++++|++.+.|.....+.+
T Consensus 131 ~r~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~ 210 (345)
T 1bx4_A 131 NRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESL 210 (345)
T ss_dssp EEEEEEECGGGGGCCGGGTTTSHHHHHHHHHCSEEEEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCSHHHHHHTHHHH
T ss_pred ceEeeeccchHhhcCcccccCcHHHHHHHhhCCEEEEEEEeccCCHHHHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHHH
Confidence 88887777777778777 77643334567889999999988777888999999999999999999998777665566778
Q ss_pred HhhcCCCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecccCCCc
Q 022475 162 EKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKE 241 (296)
Q Consensus 162 ~~~l~~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~ 241 (296)
+++++++|++++|++|++.+++....+.++++++++.+.+++.....|++.+|+|+|++|++++++++.+++|+++++..
T Consensus 211 ~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~ 290 (345)
T 1bx4_A 211 MKVMPYVDILFGNETEAATFAREQGFETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQK 290 (345)
T ss_dssp HHHGGGCSEEEEEHHHHHHHHHHTTCCCCCHHHHHHHHHTSCCSCTTSCCEEEEEETTEEEEEECSSCEEEECCCCCCCT
T ss_pred HHHhccCCEEeCCHHHHHHHhcccCCCCCCHHHHHHHHHhcccccccCCCEEEEEeCCCCeEEEECCeEEEEeccccCcC
Confidence 88999999999999999999987655567888999888531100015789999999999999998888888887765445
Q ss_pred cccCCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccCCCCCCCCCC
Q 022475 242 KLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEFN 296 (296)
Q Consensus 242 ~vvd~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~~~~~~~~~~ 296 (296)
+++|||||||+|+|||+++|++|+++++|+++|+++|+.++++.|+.+|+++++.
T Consensus 291 ~vvDttGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~p~~~~~~ 345 (345)
T 1bx4_A 291 EIIDTNGAGDAFVGGFLSQLVSDKPLTECIRAGHYAASIIIRRTGCTFPEKPDFH 345 (345)
T ss_dssp TCCCHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHTTSSSSCCCSSCCCC
T ss_pred ccccCCCcchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhccCCCCCCcccCC
Confidence 7999999999999999999999999999999999999999999999999887763
No 6
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=100.00 E-value=1.4e-45 Score=328.31 Aligned_cols=280 Identities=34% Similarity=0.532 Sum_probs=233.3
Q ss_pred cCCCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEecCCCCceeEEEEEeCCeece
Q 022475 7 SKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSL 86 (296)
Q Consensus 7 ~~~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~~~~~~ 86 (296)
+..+....+||++.|+|+++++|...|.++.++|.||+|.+|+.+++.|+++||++++++.++.+|+.+++++++++|++
T Consensus 79 ~~~~~~~~~GG~~~NvA~~la~Lg~~g~~v~~ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~T~~~~~~~~~g~r~~ 158 (383)
T 2abs_A 79 DQFNPTSLPGGSALNSVRVVQKLLRKPGSAGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLINEKERTL 158 (383)
T ss_dssp GGGCCEEEEESHHHHHHHHHHHHHCSTTSEEEEEEECSSHHHHHHHHHHHHHTCEEEEEECTTCCCEEEEEEEETTEEEE
T ss_pred ccccceeeCCChHHHHHHHHHHhccCCCcEEEEEEecCChhHHHHHHHHHHcCCceeeeecCCCCCeEEEEEEcCCceeE
Confidence 45577889999999999999996644699999999999999999999999999999998767779999999988888888
Q ss_pred eeccccccccCccccCChhhhhhhhcceEEEEeccccccChHHHHHHHHHHhh-CCCEEEEeCCchhhhhhhhHHHHhhc
Q 022475 87 VANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAA-KNKVFMMNLSAPFICEFFREPQEKAL 165 (296)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~l 165 (296)
+.+.+++..++++.. ..+.+.++|++|++|+.+..+++.+..+++.+++ .++++++|++.+.|.....+.+++++
T Consensus 159 ~~~~~a~~~l~~~~~----~~~~l~~~~~v~~~g~~~~~~~~~~~~~~~~a~~~~g~~v~~d~~~~~~~~~~~~~l~~ll 234 (383)
T 2abs_A 159 CTHLGACGSFRLPED----WTTFASGALIFYATAYTLTATPKNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQSLL 234 (383)
T ss_dssp EEECGGGGGCCCCTT----HHHHTTTCCEEEEEGGGGTTCHHHHHHHHHHHHTSTTCEEEEECCCHHHHHHCHHHHHHHH
T ss_pred eeccChhhhCChhhh----hHHHhhcCCEEEEeeecccCCHHHHHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHHHHHH
Confidence 777777766666521 3355789999999998877788899999999998 89999999987777655667788899
Q ss_pred CCCcEEEcCHHHHHHHHHHcCCC------------CCCHHHHHHHHhcCCCCCCC-CceEEEEeeCCCcEEEE-----EC
Q 022475 166 PYMDYVFGNETEARTFAKVHGWE------------TDNVEEIALKISQWPKASGT-HKRITVITQGADPVVVA-----ED 227 (296)
Q Consensus 166 ~~~dv~~~n~~E~~~l~~~~~~~------------~~~~~~~~~~l~~~~~~~~~-g~~~vvvt~G~~G~~~~-----~~ 227 (296)
+++|++++|++|++.|++..... .++++++++.|.++++.... |++.||||+|++|++++ .+
T Consensus 235 ~~~dil~pN~~Ea~~L~g~~~~~~~~~~~~s~~~~~~~~~~~a~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~ 314 (383)
T 2abs_A 235 LHTNILFGNEEEFAHLAKVHNLVAAEKTALSTANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGT 314 (383)
T ss_dssp HTCSEEEEEHHHHHHHHHHHTCC----------CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEECTTSCEEEEEECTTSC
T ss_pred hhCCEEeCCHHHHHHHhcccCcccccccccccccccccHHHHHHHHHhccccccccCCCEEEEEcCCCCeEEEEeecCCC
Confidence 99999999999999998764222 23456667776421000013 78899999999999998 56
Q ss_pred CeEEEEecccCCCccccCCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccCCCC
Q 022475 228 GKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYP 290 (296)
Q Consensus 228 ~~~~~~~~~~~~~~~vvd~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~~~~ 290 (296)
++.+++++++++..+++|||||||+|+|||+++|++|+++++|+++|+++|+.++++.|+.+|
T Consensus 315 ~~~~~~~~~~v~~~~vvDttGAGDaF~ag~~~~l~~g~~l~~al~~A~a~aa~~v~~~Ga~~p 377 (383)
T 2abs_A 315 VVVHEVGVPVVAAEKIVDTNGAGDAFVGGFLYALSQGKTVKQCIMCGNACAQDVIQHVGFSLS 377 (383)
T ss_dssp EEEEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSCCCC
T ss_pred CeEEEecCccCCcCCcCcCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCCccCC
Confidence 667788776554457999999999999999999999999999999999999999999999866
No 7
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=100.00 E-value=2.1e-44 Score=317.04 Aligned_cols=260 Identities=28% Similarity=0.426 Sum_probs=228.3
Q ss_pred CceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEe-cCCCCceeEEEEEe-CCeecee
Q 022475 10 NVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLV 87 (296)
Q Consensus 10 ~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~~~~~~~ 87 (296)
.....+||++.|+|+++++ + |.++.++|.||+|.+|+.+++.|++.||+++++. .++.+|+.++++++ +|+|+++
T Consensus 74 ~~~~~~GG~~~N~A~~la~-L--G~~~~~ig~vG~D~~G~~l~~~l~~~GV~~~~~~~~~~~~T~~~~v~v~~~g~r~~~ 150 (352)
T 4e3a_A 74 PALEASGGSAGNTAAGVAN-L--GGKAAYFGNVAADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTEDGERSMN 150 (352)
T ss_dssp SCEEEECCHHHHHHHHHHH-H--TCCEEEECCCCSSHHHHHHHHHHHHTTCEECCCCCCSSSCCEEEEEEECTTSCEEEE
T ss_pred hccEecCCHHHHHHHHHHH-c--CCCeEEEEEECCChHHHHHHHHHHHcCCccceeeccCCCCCeEEEEEEcCCCceEEE
Confidence 4468999999999999998 3 4999999999999999999999999999999986 46678999999988 7999998
Q ss_pred eccccccccCccccCChhhhhhhhcceEEEEecccc--ccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhhc
Q 022475 88 ANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFL--TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKAL 165 (296)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l 165 (296)
.+.++...++++++.. +.+.+++++|++|+.. ..+.+.+..+++.+++.|+++++|+..+.+...+.+.+.+++
T Consensus 151 ~~~ga~~~l~~~~~~~----~~~~~~~~v~~~G~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~l~~ll 226 (352)
T 4e3a_A 151 TYLGACVELGPEDVEA----DVVADAKVTYFEGYLWDPPRAKEAILDCARIAHQHGREMSMTLSDSFCVDRYRGEFLDLM 226 (352)
T ss_dssp EECGGGGGCCGGGCCH----HHHHTEEEEEEEGGGGSSSSHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHH
T ss_pred eccChhhcCChhhCCH----HHHhhCCEEEEeeeecCCchHHHHHHHHHHHHHHcCCEEEEECCchhhHHHHHHHHHHHh
Confidence 8888888888888764 5688999999999863 234578889999999999999999987766666677788899
Q ss_pred C--CCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecccCCCccc
Q 022475 166 P--YMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKL 243 (296)
Q Consensus 166 ~--~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~v 243 (296)
+ ++|++++|++|++.|++ .++++++++.+. .+++.+|+|+|++|++++++++.+++|++++. ++
T Consensus 227 ~~~~~dil~~N~~Ea~~l~g-----~~~~~~a~~~l~-------~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~--~v 292 (352)
T 4e3a_A 227 RSGKVDIVFANRQEALSLYQ-----TDDFEEALNRIA-------ADCKIAAVTMSENGAVILKGRERYYVNAIRIR--EV 292 (352)
T ss_dssp HTTSCCEEEEEHHHHHHHTT-----CSCHHHHHHHHH-------HHSSEEEEECGGGCEEEEETTEEEEECCCCCS--CC
T ss_pred cccCCcEEEeCHHHHHHHhC-----CCCHHHHHHHHh-------cCCCEEEEEECCCceEEEECCEEEEECCccCC--CC
Confidence 8 89999999999999986 457888888874 25789999999999999999999999887652 48
Q ss_pred cCCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccCCCC
Q 022475 244 VDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYP 290 (296)
Q Consensus 244 vd~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~~~~ 290 (296)
+|||||||+|+|||+++|++|+++++|+++|+++|+.++++.|+..+
T Consensus 293 vDttGAGDaF~agfl~~l~~g~~l~~a~~~A~~aAa~~v~~~G~~~~ 339 (352)
T 4e3a_A 293 VDTTGAGDLFASGFLYGYTQGRSLEDCGKLGCLAAGIVIQQIGPRPM 339 (352)
T ss_dssp SCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSSSSCS
T ss_pred cCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 99999999999999999999999999999999999999999999543
No 8
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=100.00 E-value=5.1e-45 Score=315.17 Aligned_cols=266 Identities=20% Similarity=0.278 Sum_probs=228.3
Q ss_pred cCCCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEe-cCCCCceeEEEEEe-CCee
Q 022475 7 SKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGER 84 (296)
Q Consensus 7 ~~~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~~~~ 84 (296)
+..+.+..+||++.|+|+++++ +|.++.++|.+|+|.+|+.+++.|+++||+++++. .++.+|+.+++.++ +|++
T Consensus 31 ~~~~~~~~~GG~~~NvA~~la~---lG~~~~~~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~ 107 (304)
T 3ry7_A 31 VEEAQKAFGGGKGANQAIATAR---MQADTTFITKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQAFITVNAEGQN 107 (304)
T ss_dssp CSSCCEEEEECHHHHHHHHHHH---TTCEEEEECEEESSCTTHHHHHHHHHTTCBCTTCEEESSSCCEEEEEEECSSCCE
T ss_pred cccceeecCCCHHHHHHHHHHH---CCCCeEEEEEeCCChHHHHHHHHHHHcCCcchhEEEcCCCCCcEEEEEECCCCCE
Confidence 5567889999999999999997 45999999999999999999999999999999985 57789999999998 6889
Q ss_pred ceeeccccccccCccccCChhhhhhhhcceEEEEeccccccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhh
Q 022475 85 SLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKA 164 (296)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 164 (296)
+++.+.+++..++++.+.. ..+.+.++|++|+++ ..+.+.+..+++.+++.++++++|+... .+....+
T Consensus 108 ~~~~~~ga~~~~~~~~~~~--~~~~~~~~~~v~~~~---~~~~~~~~~~~~~a~~~~~~v~~D~~~~------~~~~~~l 176 (304)
T 3ry7_A 108 TIYVYGGANMTMTPEDVIN--AKDAIINADFVVAQL---EVPIPAIISAFEIAKAHGVTTVLNPAPA------KALPNEL 176 (304)
T ss_dssp EEEEECGGGGGCCHHHHHT--THHHHHTCSEEEEET---TSCHHHHHHHHHHHHHTTCEEEEECCSC------CCCCHHH
T ss_pred EEEEecCchhcCCHHHHHH--HHHHhccCCEEEEcC---CCCHHHHHHHHHHHHHcCCEEEEeCCcc------ccccHHH
Confidence 8888888777787776654 334678999999985 4567889999999999999999999643 1335678
Q ss_pred cCCCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecccCCCcccc
Q 022475 165 LPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLV 244 (296)
Q Consensus 165 l~~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vv 244 (296)
++++|++++|++|++.+++....+.++.+++++.+. +.|++.+++|+|++|++++++++.+++|++++ +++
T Consensus 177 l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~------~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~v 247 (304)
T 3ry7_A 177 LSLIDIIVPNETEAELLSGIKVTNEQSMKDNANYFL------SIGIKTVLITLGKQGTYFATKNQSQHIEAYKV---NAI 247 (304)
T ss_dssp HTTCSEECCBHHHHHHHHSCCCCSHHHHHHHHHHHH------HTTCCEEEEECGGGCEEEECSSCEEEECCSSC---CSS
T ss_pred HHhCCEEecCHHHHHHHhCCCCCChhHHHHHHHHHH------HcCCCEEEEEeCCCceEEEECCeeEEecCCCc---ccC
Confidence 899999999999999999754333346677777774 56789999999999999999999999988765 799
Q ss_pred CCCCCchhhhHHHHHHHhcC-CCHHHHHHHhhHHhhhhhhhccC--CCCCCCCC
Q 022475 245 DTNGAGDAFVGGFLSQLVQE-KPVEDCVRTGCYAANVVIQRSGC--TYPPKPEF 295 (296)
Q Consensus 245 d~tGaGDaf~ag~~~~l~~~-~~~~~a~~~A~~~aa~~~~~~G~--~~~~~~~~ 295 (296)
|||||||+|+|||+++|++| +++++|+++|+++|+.++++.|+ .+|+++|+
T Consensus 248 dttGAGDaf~a~~~~~l~~g~~~~~~a~~~A~~~aa~~~~~~G~~~~~p~~~ev 301 (304)
T 3ry7_A 248 DTTAAGDTFIGAFVSRLNKSQDNLADAIDFGNKASSLTVQKHGAQASIPLLEEV 301 (304)
T ss_dssp CCSSHHHHHHHHHHHHCCTTCTTHHHHHHHHHHHHHTTSCCCCTGGGCCCHHHH
T ss_pred CCCCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCCccccCCCHHHH
Confidence 99999999999999999999 99999999999999999999998 46887654
No 9
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=100.00 E-value=5.7e-44 Score=312.64 Aligned_cols=271 Identities=19% Similarity=0.243 Sum_probs=217.5
Q ss_pred hhhcCCCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEe-cCCCCceeEEEEEe-C
Q 022475 4 ELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-G 81 (296)
Q Consensus 4 ~~~~~~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~ 81 (296)
++.+.......+||++.|+|+++++ +|.++.++|.+|+|.+|+.+++.|+++||+++++. .++.+|+.+++..+ +
T Consensus 46 ~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~~T~~~~~~~~~~ 122 (336)
T 4du5_A 46 PLEHAEAFHKRTAGAETNVAIGLAR---LGLKVGWASRLGTDSMGRYLLAAMAAEGIDCSHVVCDATQKTGFQFKGKVTD 122 (336)
T ss_dssp CGGGCCEEEEEEECHHHHHHHHHHH---TTCCEEEEEEECSSHHHHHHHHHHHTTTCEEEEEEECTTSCCCEEEECCCSC
T ss_pred ccchhhheeecCCCHHHHHHHHHHh---CCCcEEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCcEEEEEEEcCC
Confidence 3455667789999999999999997 45999999999999999999999999999999985 56778999998887 6
Q ss_pred Ceecee---eccccccccCccccCChhhhhhhhcceEEEEeccccccCh---HHHHHHHHHHhhCCCEEEEeCC--chhh
Q 022475 82 GERSLV---ANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSP---ESIQMVAEHAAAKNKVFMMNLS--APFI 153 (296)
Q Consensus 82 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~---~~~~~~~~~~~~~~~~~~~d~~--~~~~ 153 (296)
|+++++ ...++...++++++.. +.+.+++++|++|+....++ +.+..+++.+++.++++++|+. ...|
T Consensus 123 g~~~~~~~~~~~~a~~~l~~~~~~~----~~l~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~ 198 (336)
T 4du5_A 123 GSDPPVEYHRKGSAASHMGVADIDE----AWLLSARHLHATGVFPAISATTLPAARKTMDLMRAAGRSVSFDPNLRPTLW 198 (336)
T ss_dssp C--CCEEEECTTCTGGGCCGGGCCH----HHHTTEEEEEEESSGGGSCTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGS
T ss_pred CCcceEEEECCCChhHhCChhhCCH----hHhccCCEEEEcCchhhCChHHHHHHHHHHHHHHHCCCEEEEeCcCCchhc
Confidence 756544 2345666777777764 56789999999997754444 5667888999999999999986 2233
Q ss_pred hh--hhhHHHHhhcCCCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEE
Q 022475 154 CE--FFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVK 231 (296)
Q Consensus 154 ~~--~~~~~~~~~l~~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~ 231 (296)
.. ...+.++++++++|++++|++|++.|++ .++++++++.+. +.|++.||+|+|++|++++++++.+
T Consensus 199 ~~~~~~~~~~~~ll~~~dil~pN~~Ea~~l~g-----~~~~~~~~~~l~------~~g~~~vvvt~G~~G~~~~~~~~~~ 267 (336)
T 4du5_A 199 ATPELMRDAINDLATRADWVLPGMEEGRFLTG-----ETTPEGVARFYR------QLGAKLVVVKLGAEGAYFDGEAGSG 267 (336)
T ss_dssp SSHHHHHHHHHHHHTTCSEECCBHHHHHHHHC-----CCSHHHHHHHHH------HTTCSEEEEECGGGCEEEEETTEEE
T ss_pred CChHHHHHHHHHHHHhCCEEECCHHHHHHHhC-----CCCHHHHHHHHH------hcCCCEEEEEecCCceEEEECCeEE
Confidence 22 2356678899999999999999999986 457888888884 5678999999999999999999999
Q ss_pred EEecccCCCcc-ccCCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccC--CCCCCCCC
Q 022475 232 LFPVILLPKEK-LVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGC--TYPPKPEF 295 (296)
Q Consensus 232 ~~~~~~~~~~~-vvd~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~--~~~~~~~~ 295 (296)
++|++++ + ++|||||||+|+|||+++|++|+++++|+++|+++|+.++++.|+ .+|+++|+
T Consensus 268 ~~~~~~v---~~vvdttGAGDaf~a~~~~~l~~g~~l~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev 331 (336)
T 4du5_A 268 RVAGFPV---AEVVDTVGAGDGFAVGVISALLDGLGVPEAVKRGAWIGARAVQVLGDSEGLPTRAEL 331 (336)
T ss_dssp EECCCCC----------CHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHC------CCCCHHHH
T ss_pred EeCCccC---CCCCCCccchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCCCccCCCCHHHH
Confidence 9988765 5 999999999999999999999999999999999999999999998 47887654
No 10
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=100.00 E-value=5.9e-44 Score=310.50 Aligned_cols=271 Identities=23% Similarity=0.316 Sum_probs=219.3
Q ss_pred cCCCceeecCChhHHHHHHHHHhhcCC----CcEEEEEeecCCchhHHHHHHHHhcCCceeEEe-cCCCCceeEEEEEe-
Q 022475 7 SKENVEYIAGGATQNSIKVAQWMLQIP----GATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV- 80 (296)
Q Consensus 7 ~~~~~~~~~GG~~~n~a~~~~~l~~lg----~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~- 80 (296)
...+.+..+||++.|+|+++++ +| .++.++|.+|+|.+|+.+++.|+++||++++++ .++.+|+.+++.++
T Consensus 20 ~~~~~~~~~GG~~~NvA~~la~---LG~~~~~~~~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~i~~~~ 96 (319)
T 3lhx_A 20 KGADVKRGFGGDTLNTSVYIAR---QVDPAALTVHYVTALGTDSFSQQMLDAWHGENVDTSLTQRMENRLPGLYYIETDS 96 (319)
T ss_dssp ---CCEEEEECHHHHHHHHHHT---TSCTTTEEEEEECEECSSHHHHHHHHHHHTTTEECTTCEECTTCCCCEEEEEC--
T ss_pred CCCceEEecCChHHHHHHHHHH---cCCCCCCcEEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEeCC
Confidence 3456788999999999999987 55 799999999999999999999999999999985 56678999998887
Q ss_pred CCeeceeecccc---ccccCccccCChhhhhhhhcceEEEEeccccc-cC---hHHHHHHHHHHhhCCCEEEEeCCc--h
Q 022475 81 GGERSLVANLSA---ANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLT-VS---PESIQMVAEHAAAKNKVFMMNLSA--P 151 (296)
Q Consensus 81 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~-~~---~~~~~~~~~~~~~~~~~~~~d~~~--~ 151 (296)
+|+|+++.+.+. +..++++.+. ...+.+.++|++|++|+.+. ++ .+.+..+++.+++.++++++|+.. .
T Consensus 97 ~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~v~~~g~~~~~l~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~ 174 (319)
T 3lhx_A 97 TGERTFYYWRNEAAAKFWLASEQSA--AICEELANFDYLYLSGISLAILSPTSREKLLSLLRECRAKGGKVIFDNNYRPR 174 (319)
T ss_dssp --CCEEEEECTTCGGGGTTSSSSHH--HHHHHHTTCSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGG
T ss_pred CCCeeEEEecCCCHHHhccCccchh--hHHHHhcCCCEEEEcCchhhhcCchhHHHHHHHHHHHHhcCCEEEEeCcCCcc
Confidence 788888766543 2234333332 23456889999999987653 23 367888999999999999999853 2
Q ss_pred hhh--hhhhHHHHhhcCCCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCe
Q 022475 152 FIC--EFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGK 229 (296)
Q Consensus 152 ~~~--~~~~~~~~~~l~~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~ 229 (296)
.|. ....+.++++++++|++++|.+|++.+++ .++++++++.+. +.|++.||+|+|++|++++++++
T Consensus 175 ~~~~~~~~~~~~~~ll~~~di~~~n~~E~~~l~g-----~~~~~~~~~~l~------~~g~~~vvvt~G~~G~~~~~~~~ 243 (319)
T 3lhx_A 175 LWASKEETQQVYQQMLECTDIAFLTLDDEDALWG-----QQPVEDVIARTH------NAGVKEVVVKRGADSCLVSIAGE 243 (319)
T ss_dssp GSSCHHHHHHHHHHHHTTCSEEEEEHHHHHHHHC-----CCCHHHHHHHHH------HTTCSEEEEEETTEEEEEEETTS
T ss_pred cccCHHHHHHHHHHHHhhCCcccCCHHHHHHHhC-----CCCHHHHHHHHH------hcCCCEEEEEECCCCeEEEECCc
Confidence 232 22456678899999999999999999986 457888888884 56789999999999999998877
Q ss_pred EE-EEecccCCCccccCCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccCCCCCCC
Q 022475 230 VK-LFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKP 293 (296)
Q Consensus 230 ~~-~~~~~~~~~~~vvd~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~~~~~~~ 293 (296)
.+ ++|++++++++++|||||||+|+|||+++|++|+++++|+++|+++|+.++++.|+..|...
T Consensus 244 ~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~Ga~~~~~~ 308 (319)
T 3lhx_A 244 ALVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLTGGSAENAAKRGHLTASTVIQYRGAIIPREA 308 (319)
T ss_dssp CCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHTTSSSSSCCGGG
T ss_pred ceEEcccccCCCCccCCCCCccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhccCCCcCCCCC
Confidence 65 88876445568999999999999999999999999999999999999999999999776543
No 11
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=100.00 E-value=2.9e-44 Score=313.43 Aligned_cols=268 Identities=17% Similarity=0.228 Sum_probs=207.5
Q ss_pred CCCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEe-cCCCCceeEEEEEeCCeece
Q 022475 8 KENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVVGGERSL 86 (296)
Q Consensus 8 ~~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~~~~~~~ 86 (296)
.......+||++.|+|+++++ +|.++.++|.+|+|.+|+.+++.|+++||+++++. .++.+|+.+++..++|++++
T Consensus 46 ~~~~~~~~GG~~~NvA~~la~---LG~~~~~ig~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~v~~~~g~~~~ 122 (327)
T 3hj6_A 46 SREYTRHFGGSPANIAVNLSR---LGKKVALISRLGADAFGNYLLDVLKGEQIITDGIQQDKERRTTIVYVSKSTRTPDW 122 (327)
T ss_dssp CCEEEEEEECHHHHHHHHHHH---TTCCEEEECEEESSHHHHHHHHHHHHTTCBCTTCEEESSSCCCEEEECCCTTCCCE
T ss_pred cceeeeecCcHHHHHHHHHHH---cCCcEEEEEEeCCCHHHHHHHHHHHHcCCCcccEEEcCCCCceEEEEEecCCCccE
Confidence 456678999999999999997 45999999999999999999999999999999985 67778888887766788888
Q ss_pred eeccccccccCccccCChhhhhhhhcceEEEEeccccc--cChHHHHHHHHHHhhCCCEEEEeCCch--hhh--hhhhHH
Q 022475 87 VANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLT--VSPESIQMVAEHAAAKNKVFMMNLSAP--FIC--EFFREP 160 (296)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~--~~~~~~ 160 (296)
+.+.+++..++++++.. +.+.++|++|++++.+. .+.+.+.++++.++++++++++|+... .|. ....+.
T Consensus 123 ~~~~~a~~~~~~~~~~~----~~~~~~~~v~~~g~~l~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~ 198 (327)
T 3hj6_A 123 LPYREADMYLQEDDIIF----ELIKRSKVFHLSTFILSRKPARDTAIKAFNYAREQGKIVCFDPCYRKVLWPEGDDGAGV 198 (327)
T ss_dssp EEECSGGGGCCSCCCHH----HHHC--CEEEEESHHHHSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCSSSCSHHH
T ss_pred EEecChhhhCChhhcCH----hHhccCCEEEECchHhcCchhHHHHHHHHHHHHHCCCEEEEECCCchhhcCCHHHHHHH
Confidence 77777666666655432 45789999999987542 245788899999999999999998642 222 123566
Q ss_pred HHhhcCCCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecccCCC
Q 022475 161 QEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPK 240 (296)
Q Consensus 161 ~~~~l~~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~ 240 (296)
++++++++|++++|++|++.+++. ++++++++.+ ...|++.+++|+|++|++++++++.+++|++++
T Consensus 199 ~~~~l~~~dil~~N~~E~~~l~g~-----~~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v-- 265 (327)
T 3hj6_A 199 VEEIISRADFVKPSLDDARHLFGP-----DSPENYVKRY------LELGVKAVILTLGEEGVIASDGEEIIRIPAFSE-- 265 (327)
T ss_dssp HHHHHTTCSEECCBHHHHHHHHTT-----SCSSGGGGGG------TTTTCSEEEEECSTTCEEEECSSCEEESCSSTT--
T ss_pred HHHHHhhCCEEecCHHHHHHHhCC-----CCHHHHHHHH------HhCCCCEEEEEECCCceEEEeCCeeEEcCCccc--
Confidence 788999999999999999999863 3455666666 567889999999999999999888888887655
Q ss_pred ccccCCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccC--CCCCCCCCC
Q 022475 241 EKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGC--TYPPKPEFN 296 (296)
Q Consensus 241 ~~vvd~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~--~~~~~~~~~ 296 (296)
+++|||||||+|+|||+++|++|+++++|+++|+++|+.++++.|+ .+|+++|++
T Consensus 266 -~vvdttGAGDaf~ag~~~~l~~g~~~~~a~~~A~a~aa~~v~~~G~~~~~p~~~ev~ 322 (327)
T 3hj6_A 266 -DAVDVTGAGDAFWSGFICGLLDGYTVKRSIKLGNGVAAFKIRGVGALSPVPSKEDII 322 (327)
T ss_dssp -C-----CCHHHHHHHHHHTTSSCSTTHHHHHHHHCCCSSCC----------------
T ss_pred -ccCCCcChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHH
Confidence 8999999999999999999999999999999999999999999998 578888763
No 12
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=100.00 E-value=6.2e-44 Score=313.78 Aligned_cols=277 Identities=17% Similarity=0.183 Sum_probs=224.9
Q ss_pred hhhcCCCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEecCCCCceeEEEEEeCC-
Q 022475 4 ELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGG- 82 (296)
Q Consensus 4 ~~~~~~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~~- 82 (296)
++.+..+.+..+||++.|+|+++++ +|.++.++|.||+|.+|+.+++.|++.||+++++...+.+|+.+++..+++
T Consensus 22 ~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~t~~~~~~~~~~~ 98 (346)
T 3ktn_A 22 MLEQTEQLRMNFVGTGVNLLANLAH---FQLETALITKLPANRLGEAGKAALRKLGISDQWVGEKGDHIGSFFAEMGYGI 98 (346)
T ss_dssp CTTTCSCCEEEEECHHHHHHHHHHH---TTCEEEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECCSCCEEEEEECCBTT
T ss_pred cccccceeEEeccCHHHHHHHHHHH---cCCCeEEEEecCCCHHHHHHHHHHHHcCCcceEEEeCCCceEEEEEEecCCC
Confidence 3456678889999999999999998 459999999999999999999999999999999876677899999887744
Q ss_pred eeceeec----cccccccCccccCChhhhhhhhcceEEEEeccccccCh---HHHHHHHHHHhhCCCEEEEeCC--chhh
Q 022475 83 ERSLVAN----LSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSP---ESIQMVAEHAAAKNKVFMMNLS--APFI 153 (296)
Q Consensus 83 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~---~~~~~~~~~~~~~~~~~~~d~~--~~~~ 153 (296)
+++++.+ .++...++++++. ..+.+.++|++|++|+.+..++ +.+..+++.++++++++++|+. ...|
T Consensus 99 ~~~~~~~~~~~~~a~~~l~~~~~~---~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~r~~~~ 175 (346)
T 3ktn_A 99 RPTQVTYQNRHQSAFGISEAKDYD---FEAFLAEVDMVHICGISLSLTEKTRDAALILAQKAHAYQKKVCFDFNYRPSLN 175 (346)
T ss_dssp BCCEEEECCCTTSTTTTCCGGGSC---HHHHHTTCSEEEECTHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGC
T ss_pred CCceEEecCCCCChhhhCChhhcC---hHHHhCCCCEEEEeCccccCCHHHHHHHHHHHHHHHHcCCEEEEeCCCChHHc
Confidence 4455554 2445566776665 2346789999999998754444 6778899999999999999984 3344
Q ss_pred h----hhhhHHHHhhcCCCcEEEcCHHHHHHHHHHc-CC---CCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCc----
Q 022475 154 C----EFFREPQEKALPYMDYVFGNETEARTFAKVH-GW---ETDNVEEIALKISQWPKASGTHKRITVITQGADP---- 221 (296)
Q Consensus 154 ~----~~~~~~~~~~l~~~dv~~~n~~E~~~l~~~~-~~---~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G---- 221 (296)
. ....+.++++++++|++++|++|++.|++.. .. +.++.+++++.|. ...|++.||+|+|++|
T Consensus 176 ~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~~~l~-----~~~g~~~vvvT~G~~G~~~~ 250 (346)
T 3ktn_A 176 TANSALFMRQQYERILPYCDIVFGSRRDLVELLGFIPREDLEGEAQETELIQRFM-----SQYNLEWFAGTTRSHSQNQN 250 (346)
T ss_dssp CHHHHHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCCCTTSCHHHHHHHHHHHHH-----HHHTCSEEEEEEEEECSSCE
T ss_pred CCccHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCCCCccccchHHHHHHHHHHH-----HhcCCCEEEEecCccccccC
Confidence 3 3345778889999999999999999987643 11 1134666777774 1237889999999998
Q ss_pred ---EEEEECCeEEEEecccCCCccccCCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccCC-CCCCCC
Q 022475 222 ---VVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCT-YPPKPE 294 (296)
Q Consensus 222 ---~~~~~~~~~~~~~~~~~~~~~vvd~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~~-~~~~~~ 294 (296)
++++++++.+++|++++ +++|||||||+|+|||+++|++|+++++|+++|+++|+.++++.|+. .|++++
T Consensus 251 ~~g~~~~~~~~~~~~~~~~v---~vvdttGAGDaF~ag~~~~l~~g~~l~~a~~~A~a~aa~~v~~~G~~~~p~~~e 324 (346)
T 3ktn_A 251 YLSGYLYTQNEYQQSEKRPL---LNLDRIGAGDAYAAGILYGYSQNWSLEKAVTFATVNGVLAHTIQGDIPLTTVKQ 324 (346)
T ss_dssp EEEEEEECSSCEEECCCEEC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSSSCCCCCHHH
T ss_pred cceEEEEECCceEEeCCCcc---ccCCCCchhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCCCCCCCCHHH
Confidence 88888888888888765 79999999999999999999999999999999999999999999984 576554
No 13
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=100.00 E-value=1.3e-43 Score=306.98 Aligned_cols=266 Identities=21% Similarity=0.322 Sum_probs=221.8
Q ss_pred cCCCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEe-cCCCCceeEEEEEe-CCee
Q 022475 7 SKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGER 84 (296)
Q Consensus 7 ~~~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~~~~ 84 (296)
+..+....+||++.|+|+++++ + |.++.++|.+|+|.+|+.+++.|+++||+++++. .++.+|+.++++++ +|++
T Consensus 32 ~~~~~~~~~GG~~~N~A~~la~-l--G~~~~~~~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~ 108 (309)
T 1rkd_A 32 TGNHYQVAFGGKGANQAVAAGR-S--GANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGEN 108 (309)
T ss_dssp CCCCEEEEEECHHHHHHHHHHH-H--TCEEEEEEEEESSTTHHHHHHHHHTTTEECTTEEEETTCCCEEEEEEECTTSCE
T ss_pred ecCceeecCCCHHHHHHHHHHh-C--CCceEEEEEECCCHHHHHHHHHHHHcCCCccceEecCCCCCceEEEEECCCCCe
Confidence 3456778999999999999998 3 4999999999999999999999999999999885 56779999999988 5888
Q ss_pred ceeeccccccccCccccCChhhhhhhhcceEEEEeccccccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhh
Q 022475 85 SLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKA 164 (296)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 164 (296)
+++.+.+++..++++++.. ..+.+.++|++|+++ ..+.+.+..+++.+++.++++++|+.... +....+
T Consensus 109 ~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~v~~~~---~~~~~~~~~~~~~a~~~g~~v~~D~~~~~------~~~~~l 177 (309)
T 1rkd_A 109 VIGIHAGANAALSPALVEA--QRERIANASALLMQL---ESPLESVMAAAKIAHQNKTIVALNPAPAR------ELPDEL 177 (309)
T ss_dssp EEEEECGGGGGCCHHHHHT--THHHHHHCSEEEECS---SSCHHHHHHHHHHHHHTTCEEEECCCSCC------CCCHHH
T ss_pred EEEEeCCchhcCCHHHHHH--HHHhcccCCEEEEeC---CCCHHHHHHHHHHHHHcCCEEEEECCccc------cchHHH
Confidence 8877777776777766543 234578899999975 44568888899999999999999996531 123457
Q ss_pred cCCCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecccCCCcccc
Q 022475 165 LPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLV 244 (296)
Q Consensus 165 l~~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vv 244 (296)
++++|++++|.+|++.|++....+.++++++++.+. +.|++.+++|+|++|++++++++.+++|++++ +++
T Consensus 178 l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~------~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~v 248 (309)
T 1rkd_A 178 LALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLH------EKGIRTVLITLGSRGVWASVNGEGQRVPGFRV---QAV 248 (309)
T ss_dssp HTTCSEECCCHHHHHHHHSCCCSSHHHHHHHHHHHH------HTTCSEEEEECGGGCEEEEETTEEEEECCCCC---CCS
T ss_pred HhhCCEEEcCHHHHHHHhCCCCCCHHHHHHHHHHHH------HhCCCEEEEEECCCcEEEEeCCceEEcCCCCC---CcC
Confidence 899999999999999998743222245666777774 46788999999999999999988888887654 799
Q ss_pred CCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccC--CCCCCCCC
Q 022475 245 DTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGC--TYPPKPEF 295 (296)
Q Consensus 245 d~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~--~~~~~~~~ 295 (296)
|||||||+|+|+|+++|++|+++++|+++|+++|+.++++.|+ .+|+++++
T Consensus 249 dt~GAGD~f~a~~~~~l~~g~~~~~a~~~a~~~aa~~~~~~G~~~~~p~~~ev 301 (309)
T 1rkd_A 249 DTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIAVTRKGAQPSVPWREEI 301 (309)
T ss_dssp CCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSGGGCCCHHHH
T ss_pred CCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCCccCCCCCHHHH
Confidence 9999999999999999999999999999999999999999998 46776543
No 14
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=100.00 E-value=1.1e-42 Score=303.42 Aligned_cols=266 Identities=18% Similarity=0.247 Sum_probs=219.4
Q ss_pred CCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEe-cCCCCceeEEEEEeCCeecee
Q 022475 9 ENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVVGGERSLV 87 (296)
Q Consensus 9 ~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~~~~~~~~ 87 (296)
...+..+||++.|+|+++++|. .|.++.++|.||+|.+|+.+++.|+++||+++++. .++.+|+.+++.+++|+|+++
T Consensus 43 ~~~~~~~GG~~~NvA~~la~Lg-~G~~~~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~v~~~~g~r~~~ 121 (328)
T 4e69_A 43 GTYRLGFAGDTFNTAWYLARLR-PESRISYFSAIGDDALSQQMRAAMSAAGIDGGGLRVIPGRTVGLYLITLEQGERSFA 121 (328)
T ss_dssp TEEEEEEECHHHHHHHHHHHHC-TTSEEEEECEECSSHHHHHHHHHHHHTTEECTTCEECTTCCCEEEEEEEETTEEEEE
T ss_pred CceEEecCCHHHHHHHHHHhcC-CCCcEEEEEeeCCCHHHHHHHHHHHHcCCccceEEEcCCCCCeEEEEEecCCceEEE
Confidence 3457889999999999999832 15899999999999999999999999999999885 566789999998888899887
Q ss_pred ecccccc---ccCccccCChhhhhhhhcceEEEEecccccc----ChHHHHHHHHHHhhCCCEEEEeCC--chhhh--hh
Q 022475 88 ANLSAAN---CYKSEHLKRPEIWSIVEKAKYYYIAGFFLTV----SPESIQMVAEHAAAKNKVFMMNLS--APFIC--EF 156 (296)
Q Consensus 88 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~----~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~--~~ 156 (296)
.+.+... .+...++ ..+.+.++|++|++++.+.. +.+.+.++++.+++.++++++|+. +..|. ..
T Consensus 122 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~ 197 (328)
T 4e69_A 122 YWRGQSAARELAGDADA----LAAAMARADVVYFSGITLAILDQCGRATLLRALAQARATGRTIAFDPNLRPRLWAGTGE 197 (328)
T ss_dssp EECTTCGGGGTTSCHHH----HHHHHTTCSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCHHH
T ss_pred EeCCCCHHHhhcCcccc----chHHhcCCCEEEECCchhhccCchHHHHHHHHHHHHHhCCCEEEEeCCCChhhcCCHHH
Confidence 6654321 1222111 12567899999999976532 235677888999999999999994 33331 23
Q ss_pred hhHHHHhhcCCCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecc
Q 022475 157 FREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVI 236 (296)
Q Consensus 157 ~~~~~~~~l~~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~ 236 (296)
..+.++++++++|++++|.+|++.|++ .++++++++.+. +.|++.+|||+|++|++++++++.+++|++
T Consensus 198 ~~~~~~~ll~~~dil~~N~~E~~~l~g-----~~~~~~~~~~l~------~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~ 266 (328)
T 4e69_A 198 MTETIMQGAAVSDIALPSFEDEAAWFG-----DAGPDATADRYA------RAGVRSVVVKNGPHAVHFLQDGRRGRVPVP 266 (328)
T ss_dssp HHHHHHHHHTTCSEECCBHHHHHHHHT-----CSSHHHHHHHHH------TTTCSEEEEBCTTSCEEEEETTEEEEECCC
T ss_pred HHHHHHHHHHhCCEEeCCHHHHHHHcC-----CCCHHHHHHHHH------hcCCCEEEEEeCCCCeEEEeCCceEEecCC
Confidence 456788899999999999999999986 457888898884 668899999999999999999999998876
Q ss_pred cCCCccccCCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccCCCCCC
Q 022475 237 LLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPK 292 (296)
Q Consensus 237 ~~~~~~vvd~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~~~~~~ 292 (296)
+ .++++|||||||+|+|+|+++|++|+++++|+++|+++|+.++++.|+..|..
T Consensus 267 ~--~~~vvdttGAGDaf~a~~~~~l~~g~~l~~a~~~A~~~aa~~v~~~Ga~~p~~ 320 (328)
T 4e69_A 267 P--VAQVVDTTAAGDSFNAGLLDSVLAGQPLETAIAAAAALAGQVVQGKGALVEVP 320 (328)
T ss_dssp C--CCSCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSSCCC-
T ss_pred C--CCCccCCCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHccCCCcCChh
Confidence 4 23899999999999999999999999999999999999999999999977754
No 15
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=100.00 E-value=8.7e-44 Score=311.87 Aligned_cols=268 Identities=23% Similarity=0.263 Sum_probs=210.2
Q ss_pred CCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEe-cCCCCceeEEEEEe-CCeece
Q 022475 9 ENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSL 86 (296)
Q Consensus 9 ~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~~~~~~ 86 (296)
......+||++.|+|+++++ + |.++.++|.+|+|.+|+.+++.|+++||+++++. .++.+|+.+++.++ +|+|++
T Consensus 29 ~~~~~~~GG~~~NvA~~la~-L--G~~~~~ig~vG~D~~g~~l~~~l~~~gV~~~~v~~~~~~~T~~~~v~~~~~g~r~~ 105 (338)
T 3ljs_A 29 RAFLQCAGGAPANVAVAVAR-L--GGAVQFVGMLGSDMFGDFLFDSFAEAGVVTDGIVRTSTAKTALAFVALDAHGERSF 105 (338)
T ss_dssp CCEEEEEECHHHHHHHHHHH-H--TCCEEEESEEESSHHHHHHHHHHHHHTCBCTTCEEESSSCCCEEEEECCSTTCCEE
T ss_pred hceeecCCChHHHHHHHHHh-C--CCCEEEEeeccCCHHHHHHHHHHHHcCCCceeEEEcCCCCceEEEEEECCCCCeEE
Confidence 36778999999999999998 3 4999999999999999999999999999999885 57788999999988 688876
Q ss_pred eecc--ccccccCccccCChhhhhhhhcceEEEEeccccc--cChHHHHHHHHHHhhCCCEEEEeCCc--hhhh--hhhh
Q 022475 87 VANL--SAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLT--VSPESIQMVAEHAAAKNKVFMMNLSA--PFIC--EFFR 158 (296)
Q Consensus 87 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~--~~~~ 158 (296)
..+. +++..++++++.. +.+.++|++|++++.+. .+.+.+..+++.+++.++++++|+.. ..|. ....
T Consensus 106 ~~~~~~~a~~~l~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~ 181 (338)
T 3ljs_A 106 SFYRPPAADLLFRVEHFQD----ASFSDALIFHACSNSMTDADIAEVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENPA 181 (338)
T ss_dssp EEECSSCGGGGCCGGGCCH----HHHHTEEEEEEEGGGGSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCTTCCTH
T ss_pred EEeCCCChhHhCCHhhcCH----hHhcCCCEEEECChHhcCchHHHHHHHHHHHHHHcCCEEEEECCCChhhcCCHHHHH
Confidence 5443 5666777777764 45788999999987642 23467889999999999999999842 2332 2246
Q ss_pred HHHHhhcCCCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecccC
Q 022475 159 EPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILL 238 (296)
Q Consensus 159 ~~~~~~l~~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~ 238 (296)
+.++++++++|++++|++|++.|++.... +.+++++.| ...|++.+|||+|++|++++++++.+++|++++
T Consensus 182 ~~~~~ll~~~dil~~N~~E~~~l~g~~~~---~~~~~~~~l------~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v 252 (338)
T 3ljs_A 182 SRLWKGLSLADVVKLSSEELDYLANTLAA---DANAVIQQL------WQGRAQLLLVTDAAGPVHWYTRTAGGEVPTFRV 252 (338)
T ss_dssp HHHHHHHHTCSEEEEEHHHHHHHHHHHTS---CHHHHHHHH------TTTTCCEEEEEETTEEEEEEESSCEEEECC---
T ss_pred HHHHHHHhhCCEEEecHHHHHHHhCCCCh---hHHHHHHHH------HhcCCCEEEEeeCCCceEEEECCceEEeCCCCC
Confidence 67888999999999999999999975421 223477777 467899999999999999999999999988765
Q ss_pred CCccccCCCCCchhhhHHHHHHHhcC--------------CCHHHHHHHhhHHhhhhhhhccC--CCCCCCCC
Q 022475 239 PKEKLVDTNGAGDAFVGGFLSQLVQE--------------KPVEDCVRTGCYAANVVIQRSGC--TYPPKPEF 295 (296)
Q Consensus 239 ~~~~vvd~tGaGDaf~ag~~~~l~~~--------------~~~~~a~~~A~~~aa~~~~~~G~--~~~~~~~~ 295 (296)
+++|||||||+|+|||+++|++| +++++|+++|+++|+.++++.|+ ..|+++|+
T Consensus 253 ---~vvDttGAGDaF~a~~~~~l~~g~~~~~~~~~~~~~~~~l~~al~~A~~~aa~~v~~~Ga~~~~p~~~ev 322 (338)
T 3ljs_A 253 ---QVQDSNAAGDAFVGGMLYTFAQQFDDAAALIDFCHDPESIVSTLRFAAAVGALAVTRQGAFTAMPMLSEV 322 (338)
T ss_dssp -----------CHHHHHHHHHHHHHHCSSTHHHHHHHTCHHHHHHHHHHHHHHHGGGC----CCCCTTHHHHH
T ss_pred ---ccCCCCCccHHHHHHHHHHHHhCCCcccchhccccChHHHHHHHHHHHHHHHHHhCCCCCCCCCCCHHHH
Confidence 79999999999999999999999 89999999999999999999998 45766543
No 16
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=100.00 E-value=1.5e-42 Score=302.40 Aligned_cols=265 Identities=22% Similarity=0.330 Sum_probs=219.3
Q ss_pred CCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEe-cCCCCceeEEEEEe-CCeece
Q 022475 9 ENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSL 86 (296)
Q Consensus 9 ~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~~~~~~ 86 (296)
.+....+||++.|+|+++++ +|.++.++|.+|+|.+|+.+++.|+++||+++++. .++.+|+.++++++ +|+|++
T Consensus 36 ~~~~~~~GG~~~NvA~~la~---LG~~~~~ig~vG~D~~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~r~~ 112 (325)
T 3h49_A 36 ERIAMTTGGDAINEATIISR---LGHRTALMSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTF 112 (325)
T ss_dssp SCCCCEEESHHHHHHHHHHH---TTCEEEEECEEESSHHHHHHHHHHHHHTCBCSSCEEETTSCCCEEEEEECTTSCEEE
T ss_pred heeEEccCcHHHHHHHHHHH---CCCCeEEEEEECCChHHHHHHHHHHHcCCceeeEEecCCCCCceEEEEECCCCceeE
Confidence 35678999999999999997 45999999999999999999999999999999885 56778999998887 788888
Q ss_pred eeccc-cccccCccccCChhhhhhhhcceEEEEeccccc--cChHHHHHHHHHHhhCCCEEEEe-CCchhhhhhhhHHHH
Q 022475 87 VANLS-AANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLT--VSPESIQMVAEHAAAKNKVFMMN-LSAPFICEFFREPQE 162 (296)
Q Consensus 87 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~--~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~~~ 162 (296)
+...+ +...++++++.. +.+.+++++|++++... .+.+.+..+++.+++++..++.+ .++..|. ..+.+.
T Consensus 113 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~d~~~~~~~~~--~~~~~~ 186 (325)
T 3h49_A 113 VTNRNGSLWKLNIDDVDF----ARFSQAKLLSLASIFNSPLLDGKALTEIFTQAKARQMIICADMIKPRLNE--TLDDIC 186 (325)
T ss_dssp ECCTTSHHHHCCGGGCCG----GGGGGCSEEEEEEETTSTTSCHHHHHHHHHHHHHTTCEEEEEECCCSSCC--CHHHHH
T ss_pred EeccCcccccCChhhcCh----hhhccCCEEEEecccCCcccCHHHHHHHHHHHHhcCCEEEecCCchhhhh--HHHHHH
Confidence 76654 334566666653 45788999999986532 24578889999999988554433 4433331 234567
Q ss_pred hhcCCCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecccCCCcc
Q 022475 163 KALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEK 242 (296)
Q Consensus 163 ~~l~~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~ 242 (296)
++++++|++++|++|++.+++ .++++++++.+ ...|++.+++|+|++|++++++++.+++|++++ .+
T Consensus 187 ~~l~~~dil~~N~~E~~~l~g-----~~~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~--~~ 253 (325)
T 3h49_A 187 EALSYVDYLFPNFAEAKLLTG-----KETLDEIADCF------LACGVKTVVIKTGKDGCFIKRGDMTMKVPAVAG--IT 253 (325)
T ss_dssp HHHTTCSEEECBHHHHHHHHT-----CSSHHHHHHHH------HTTTCSEEEEECTTSCEEEEETTEEEEECCCSS--CC
T ss_pred HHHhhCCEEecCHHHHHHHhC-----CCCHHHHHHHH------HHcCCCEEEEEeCCCCeEEEECCeEEEecCcCC--CC
Confidence 889999999999999999986 45788888888 466889999999999999999999888887653 27
Q ss_pred ccCCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccC--CCCCCCCC
Q 022475 243 LVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGC--TYPPKPEF 295 (296)
Q Consensus 243 vvd~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~--~~~~~~~~ 295 (296)
++|||||||+|+|||+++|++|+++++|+++|+++|+.++++.|+ .+|+++++
T Consensus 254 vvDttGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev 308 (325)
T 3h49_A 254 AIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGVKNRKLV 308 (325)
T ss_dssp CSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSSSSCSSSHHH
T ss_pred CcCCCChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcccCCCCCCCCHHHH
Confidence 999999999999999999999999999999999999999999997 47877654
No 17
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=100.00 E-value=2.2e-43 Score=308.39 Aligned_cols=267 Identities=24% Similarity=0.306 Sum_probs=221.7
Q ss_pred CCCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEe-cCCCCceeEEEEEe-CCeec
Q 022475 8 KENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERS 85 (296)
Q Consensus 8 ~~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~~~~~ 85 (296)
..+....+||++.|+|+++++ +|.++.++|.+|+|.+|+.+++.|+++||+++++. .++.+|+.++++++ +|+|+
T Consensus 53 ~~~~~~~~GG~~~NvA~~la~---LG~~~~~i~~vG~D~~G~~l~~~L~~~Gv~~~~v~~~~~~~T~~~~v~~~~~g~~~ 129 (331)
T 2fv7_A 53 GHKFFIGFGGKGANQCVQAAR---LGAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNI 129 (331)
T ss_dssp CSEEEEEEECHHHHHHHHHHH---TTCCEEEEEEEESSHHHHHHHHHHHTTTEECTTEEEESSSCCEEEEEEECTTSCEE
T ss_pred cCceEECcCCHHHHHHHHHHH---CCCCeEEEEEECCChhHHHHHHHHHHcCCcceeeEecCCCCCceEEEEECCCCCeE
Confidence 345678899999999999998 45999999999999999999999999999999885 56788999999988 58888
Q ss_pred eeeccccccccCccccCChhhhhhhhcceEEEEeccccccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhhc
Q 022475 86 LVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKAL 165 (296)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l 165 (296)
++.+.+++..++++++.. ..+.+.++|++++++ ..+.+.+..+++.+++.++++++|+.... .+....++
T Consensus 130 ~~~~~ga~~~l~~~~~~~--~~~~l~~~~~v~~~~---~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~-----~~~~~~ll 199 (331)
T 2fv7_A 130 IVIVAGANLLLNTEDLRA--AANVISRAKVMVCQL---EITPATSLEALTMARRSGVKTLFNPAPAI-----ADLDPQFY 199 (331)
T ss_dssp EEEECGGGGGCCHHHHHH--THHHHHHCSEEEECS---SSCHHHHHHHHHHHHHTTCEEEECCCSCC-----TTCCTHHH
T ss_pred EEecCCccccCCHHHHHH--HHHhhccCCEEEEec---CCCHHHHHHHHHHHHHcCCEEEEeCCccc-----ccchHHHH
Confidence 887777766677665542 223567899999975 34567888899999999999999996431 12233577
Q ss_pred CCCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECC--eEEEEecccCCCccc
Q 022475 166 PYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDG--KVKLFPVILLPKEKL 243 (296)
Q Consensus 166 ~~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~--~~~~~~~~~~~~~~v 243 (296)
+++|++++|++|++.|++....+.++++++++.+. +.|++.|++|+|++|+++++++ +.+++|++++ ++
T Consensus 200 ~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~------~~g~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v---~v 270 (331)
T 2fv7_A 200 TLSDVFCCNESEAEILTGLTVGSAADAGEAALVLL------KRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKV---KA 270 (331)
T ss_dssp HTCSEEEEEHHHHHHHHSSCCCSHHHHHHHHHHHH------TTTCSEEEEECGGGCEEEEESSCCSCEEECCCCC---CC
T ss_pred hcCCEEEeCHHHHHHHhCCCCCChhHHHHHHHHHH------HcCCCEEEEEECCCceEEEECCCCceeEecCCCC---cc
Confidence 89999999999999998743322345667777773 5688999999999999998887 7788877654 79
Q ss_pred cCCCCCchhhhHHHHHHHhcC--CCHHHHHHHhhHHhhhhhhhccC--CCCCCCCCC
Q 022475 244 VDTNGAGDAFVGGFLSQLVQE--KPVEDCVRTGCYAANVVIQRSGC--TYPPKPEFN 296 (296)
Q Consensus 244 vd~tGaGDaf~ag~~~~l~~~--~~~~~a~~~A~~~aa~~~~~~G~--~~~~~~~~~ 296 (296)
+|||||||+|+|||+++|++| +++++|+++|+++|+.++++.|+ .+|+++++.
T Consensus 271 vdttGAGDaf~a~~~~~l~~g~~~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~ 327 (331)
T 2fv7_A 271 VDTTGAGDSFVGALAFYLAYYPNLSLEDMLNRSNFIAAVSVQAAGTQSSYPYKKDLP 327 (331)
T ss_dssp SCCTTHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHTSSSGGGGCCCGGGSC
T ss_pred CCCCCchHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhCCCCCccCCCCHHHHh
Confidence 999999999999999999999 99999999999999999999998 568887763
No 18
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=100.00 E-value=2.3e-43 Score=308.14 Aligned_cols=263 Identities=16% Similarity=0.194 Sum_probs=218.2
Q ss_pred eeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEe-cCCCCceeEEEEEe-CCeece-ee
Q 022475 12 EYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSL-VA 88 (296)
Q Consensus 12 ~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~~~~~~-~~ 88 (296)
..++||++.|+|+++++ +|.++.++|.+|+|.+|+.+++.|++.||+++++. .++.+|+.+++.++ +|++++ +.
T Consensus 33 ~~~~GG~~~NvA~~la~---LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~i~~~~~g~~~~~~~ 109 (330)
T 3iq0_A 33 GPYPSGAPAIFIDQVTR---LGVPCGIISCVGNDGFGDINIHRLAADGVDIRGISVLPLEATGSAFVTYHNSGDRDFIFN 109 (330)
T ss_dssp EEEEECHHHHHHHHHHH---TTCCEEEEEEEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCEEEEEEECC---CEEEEE
T ss_pred CcCCCCHHHHHHHHHHH---CCCcEEEEEEeCCChHHHHHHHHHHHcCCCeeeEEEcCCCCceEEEEEECCCCCeeEEEe
Confidence 56799999999999997 45999999999999999999999999999999985 67789999999887 678743 33
Q ss_pred c-cccccccCccccCChhhhhhhhcceEEEEecccc--ccChHHHHHHHHHHhhCCCEEEEeCCch--hhh-hhhhHHHH
Q 022475 89 N-LSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFL--TVSPESIQMVAEHAAAKNKVFMMNLSAP--FIC-EFFREPQE 162 (296)
Q Consensus 89 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~-~~~~~~~~ 162 (296)
. .++...++++++.. ..+.+++++|++|+.+ ....+.+..+++.++++++++++|+... .|. +...+.++
T Consensus 110 ~~~~a~~~~~~~~~~~----~~~~~~~~v~~sg~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~ 185 (330)
T 3iq0_A 110 IKNAACGKLSAQHVDE----NILKDCTHFHIMGSSLFSFHMVDAVKKAVTIVKANGGVISFDPNIRKEMLDIPEMRDALH 185 (330)
T ss_dssp CTTSGGGGCCGGGCCG----GGGTTEEEEEEEGGGCSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGGGSHHHHHHHH
T ss_pred ccCChhhhCCHhhCCH----hHhccCCEEEEechhhcCcchHHHHHHHHHHHHHcCCEEEEcCCCCccccCcHHHHHHHH
Confidence 2 34555677777664 4678999999999875 1223567889999999999999998543 232 22456778
Q ss_pred hhcCCCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecccCCCcc
Q 022475 163 KALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEK 242 (296)
Q Consensus 163 ~~l~~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~ 242 (296)
++++++|++++|++|++.+++ .++++++++.|. ..|++.+|+|+|++|++++++++.+++|++++ +
T Consensus 186 ~~l~~~dil~~N~~E~~~l~g-----~~~~~~~~~~l~------~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v---~ 251 (330)
T 3iq0_A 186 FVLELTDIYMPSEGEVLLLSP-----HSTPERAIAGFL------EEGVKEVIVKRGNQGASYYSANEQFHVESYPV---E 251 (330)
T ss_dssp HHHHTCSEECCBGGGTTTTCS-----CSSHHHHHHHHH------HHTCSEEEEECGGGCEEEECSSCEEEECCCCC---C
T ss_pred HHHhhCCEEecCHHHHHHHhC-----CCCHHHHHHHHH------HcCCCEEEEEeCCCceEEEECCceEEecCCCC---c
Confidence 889999999999999998875 457888888884 45788999999999999999988999887765 8
Q ss_pred ccCCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccC--CCCCCCCC
Q 022475 243 LVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGC--TYPPKPEF 295 (296)
Q Consensus 243 vvd~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~--~~~~~~~~ 295 (296)
++|||||||+|+|||+++|++|+++++|+++|+++|+.++++.|+ ..|+++|+
T Consensus 252 vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev 306 (330)
T 3iq0_A 252 EVDPTGAGDCFGGAWIACRQLGFDAHRALQYANACGALAVTRRGPMEGTSRLMEI 306 (330)
T ss_dssp CSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSCSSSTTCCCHHHH
T ss_pred cCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCcCCCCCCCCHHHH
Confidence 999999999999999999999999999999999999999999998 56776553
No 19
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=100.00 E-value=9.9e-43 Score=301.53 Aligned_cols=268 Identities=19% Similarity=0.188 Sum_probs=218.9
Q ss_pred hhhcCCCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEecCCCCceeEEEEEe--C
Q 022475 4 ELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV--G 81 (296)
Q Consensus 4 ~~~~~~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~--~ 81 (296)
+..+..+.+..+||++.|+|+++++ +|.++.++|.+|+| +|+.+++.|+++||+++++...+ +|+.++.+++ +
T Consensus 26 ~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~~~~~~ 100 (309)
T 3umo_A 26 GKLRCTAPVFEPGGGGINVARAIAH---LGGSATAIFPAGGA-TGEHLVSLLADENVPVATVEAKD-WTRQNLHVHVEAS 100 (309)
T ss_dssp SEEECCCCEEEEESHHHHHHHHHHH---TTCCEEEEEEECHH-HHHHHHHHHHHTTCCEEEEECSS-CCCCCEEEEETTT
T ss_pred CeEEeceeeecCCchHHHHHHHHHH---cCCCeEEEEEecCc-hHHHHHHHHHHcCCceEEEEecC-CCeeEEEEEECCC
Confidence 4556678899999999999999997 45999999999999 99999999999999999986543 4666665554 5
Q ss_pred CeeceeeccccccccCccccCC-hhhhhhhhcceEEEEecccc-ccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhH
Q 022475 82 GERSLVANLSAANCYKSEHLKR-PEIWSIVEKAKYYYIAGFFL-TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFRE 159 (296)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~g~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 159 (296)
|+++++...++ .++++++.. .+..+.+..++++|++|+.. ..+.+.+..+++.++++++++++|+...
T Consensus 101 g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~v~~D~~~~-------- 170 (309)
T 3umo_A 101 GEQYRFVMPGA--ALNEDEFRQLEEQVLEIESGAILVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSGE-------- 170 (309)
T ss_dssp CCEEEEECCCC--CCCHHHHHHHHHHHTTSCTTCEEEEESCCCTTCCHHHHHHHHHHHHHTTCEEEEECCHH--------
T ss_pred CcEEEEEcCCC--CCCHHHHHHHHHHHHhcCCCCEEEEEccCCCCCCHHHHHHHHHHHHhcCCEEEEECCcH--------
Confidence 77777766654 355554422 11112245788999998753 4567889999999999999999999643
Q ss_pred HHHhhcCCC--cEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCc-eEEEEeeCCCcEEEEECCeEEEEecc
Q 022475 160 PQEKALPYM--DYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHK-RITVITQGADPVVVAEDGKVKLFPVI 236 (296)
Q Consensus 160 ~~~~~l~~~--dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~-~~vvvt~G~~G~~~~~~~~~~~~~~~ 236 (296)
.+.+++++. |++++|++|++.+++....+.++..++++.+. +.+. +.+++|+|++|++++++++.+++|++
T Consensus 171 ~l~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~------~~g~~~~vvvt~G~~G~~~~~~~~~~~~~~~ 244 (309)
T 3umo_A 171 ALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIV------NSGKAKRVVVSLGPQGALGVDSENCIQVVPP 244 (309)
T ss_dssp HHHHHTSSCCBSEECCBHHHHHHHHTSCCCSTTHHHHHHHHHH------HTTSBSCEEEECGGGCEEEECSSCEEEECCC
T ss_pred HHHHHhccCCCeEEEeCHHHHHHHhCCCCCCHHHHHHHHHHHH------HcCCCcEEEEEcCcccEEEEECCcEEEEeCC
Confidence 256778874 99999999999999865444567788888884 4454 78999999999999999889998876
Q ss_pred cCCCccccCCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccCCCCCCCCC
Q 022475 237 LLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEF 295 (296)
Q Consensus 237 ~~~~~~vvd~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~~~~~~~~~ 295 (296)
++ +++|||||||+|+|||+++|++|+++++|+++|+++|+.++++.|+..|+++|+
T Consensus 245 ~v---~vvdttGAGD~f~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~~~ev 300 (309)
T 3umo_A 245 PV---KSQSTVGAGDSMVGAMTLKLAENASLEEMVRFGVAAGSAATLNQGTRLCSHDDT 300 (309)
T ss_dssp SC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSTTCCCCHHHH
T ss_pred Cc---CCCCCcChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCCCCCCCHHHH
Confidence 55 899999999999999999999999999999999999999999999988887654
No 20
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=6.8e-43 Score=306.40 Aligned_cols=257 Identities=18% Similarity=0.188 Sum_probs=218.2
Q ss_pred CCCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEe-cCCCCceeEEEEEe-CCeec
Q 022475 8 KENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERS 85 (296)
Q Consensus 8 ~~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~~~~~ 85 (296)
.......+||++.|+|+++++ +|.++.++|.+|+|.+|+.+++.|+++||+++++. .++.+|+.++++++ +|+|+
T Consensus 58 ~~~~~~~~GG~~~NvA~~la~---LG~~~~~i~~vG~D~~G~~i~~~L~~~GVd~~~v~~~~~~~T~~~~v~~~~~g~r~ 134 (343)
T 2rbc_A 58 PYEVLQIAEGMASSAAYAVHR---MGGRASLWGAVGDDETGTRILRDLSESGIDTSGMTVAPGARSALSTIIIDNRGERL 134 (343)
T ss_dssp CSEEEEEEECHHHHHHHHHHH---TTCEEEEECEEESSHHHHHHHHHHHHTTEECTTCEEETTCCCEEEEEEECTTSCEE
T ss_pred eeeeEEcCCcHHHHHHHHHHH---cCCceEEEEEeCCCHHHHHHHHHHHHcCCceeeEEEcCCCCCceEEEEECCCCCEE
Confidence 345678899999999999997 45999999999999999999999999999999885 56778999999988 78888
Q ss_pred eeeccccccccCccccCChhhhhhhhcceEEEEeccccccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHh-h
Q 022475 86 LVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEK-A 164 (296)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~ 164 (296)
++.+.+++..++++++.. +.+.++|++|++++ .++.+..+++.+++.++++++|+... .+.+.+ +
T Consensus 135 ~~~~~~~~~~~~~~~l~~----~~l~~~~~v~~~~~----~~~~~~~~~~~a~~~g~~v~~Dp~~~------~~~~~~~l 200 (343)
T 2rbc_A 135 IVPFYDHRLHEKKRACTP----EDIALFDAVLVDVR----WPELALDVLTVARALGKPAILDGDVA------PVETLEGL 200 (343)
T ss_dssp EEEECCGGGGSSCCCCCH----HHHTTCSEEEECSS----SHHHHHHHHHHHHHTTCCEEEEECSC------CHHHHHHH
T ss_pred EEEcCCCcccCChhHhcH----hhhCCCCEEEEcCC----CHHHHHHHHHHHHHCCCEEEEECCcc------ccccHHHH
Confidence 876666655666655542 45788999999864 34678889999999999999998542 345666 8
Q ss_pred cCCCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCc-eEEEEeeCCCcEEEEECC--eEEEEecccCCCc
Q 022475 165 LPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHK-RITVITQGADPVVVAEDG--KVKLFPVILLPKE 241 (296)
Q Consensus 165 l~~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~-~~vvvt~G~~G~~~~~~~--~~~~~~~~~~~~~ 241 (296)
++++|++++|++|++.|++ .++++++++.|. ..|+ +.||+|+|++|+++++++ +.+++|++++
T Consensus 201 l~~~dil~~N~~Ea~~l~g-----~~~~~~~~~~l~------~~g~~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v--- 266 (343)
T 2rbc_A 201 APAATHIVFSEPAATRLTG-----LETVKDMLPVLH------ARYPQTFIAVTAGPAGCWWTEADDPTVHFQTTMQV--- 266 (343)
T ss_dssp GGGCSEEEEEHHHHHHHHC-----CSSHHHHHHHHH------HHSTTSEEEEECGGGCEEEECTTCCCEEEECCCCC---
T ss_pred HhcCCEEEeCHHHHHHHcC-----CCCHHHHHHHHH------HhCCCceEEEEECCcceEEEeCCCceeEEecCCCC---
Confidence 9999999999999999986 357888888884 4577 899999999999998887 7888887655
Q ss_pred cccCCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccCC--CCCCCCC
Q 022475 242 KLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCT--YPPKPEF 295 (296)
Q Consensus 242 ~vvd~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~~--~~~~~~~ 295 (296)
+++|||||||+|+|||+++|++|+++++|+++|+++|+.++++.|+. .|+++++
T Consensus 267 ~vvDttGAGDaF~ag~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev 322 (343)
T 2rbc_A 267 EAVDTLAAGDIFHGTFALAMAEGMQSRAAVRLSSVAAALKCTVFGGRIGAPTREET 322 (343)
T ss_dssp CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSGGGGCCCHHHH
T ss_pred ccccCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCCCccCCCCHHHH
Confidence 79999999999999999999999999999999999999999999984 6776543
No 21
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=100.00 E-value=2.3e-42 Score=300.47 Aligned_cols=267 Identities=20% Similarity=0.250 Sum_probs=219.6
Q ss_pred cCCCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEe-cCCCCceeEEEEEe-CCee
Q 022475 7 SKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGER 84 (296)
Q Consensus 7 ~~~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~~~~ 84 (296)
+..+.+..+||++.|+|+++++ +|.++.++|.+|+|.+|+.+++.|+++||+++++. .++.+|+.+++.++ ++++
T Consensus 32 ~~~~~~~~~GG~~~NvA~~la~---LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~ 108 (319)
T 3pl2_A 32 DVQSFGKYLGGSAANVSVAAAR---HGHNSALLSRVGNDPFGEYLLAELERLGVDNQYVATDQTFKTPVTFCEIFPPDDF 108 (319)
T ss_dssp GCCCBCCEEECHHHHHHHHHHH---TTCCEEEEEEEESSHHHHHHHHHHHHTTEECTTEEEESSSCCCEEEECCBTTTBC
T ss_pred ccceeeecCCCcHHHHHHHHHH---CCCceEEEEEeCCCHHHHHHHHHHHHcCCccccEEecCCCCceEEEEEEcCCCCe
Confidence 3456678999999999999997 45999999999999999999999999999999985 67789999998777 6777
Q ss_pred ceeecc--cc-ccccCccccCChhhhhhhhcceEEEEeccccccCh--HHHHHHHHHHhhCCCEEEEeCC--chhhh--h
Q 022475 85 SLVANL--SA-ANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSP--ESIQMVAEHAAAKNKVFMMNLS--APFIC--E 155 (296)
Q Consensus 85 ~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~--~~~~~--~ 155 (296)
+++.+. ++ ...++++++.. +.+.++|++|++|+.+...+ +.+..+++.+++ +.++++|+. ...|. .
T Consensus 109 ~~~~~~~~~a~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~v~~D~~~~~~~~~~~~ 183 (319)
T 3pl2_A 109 PLYFYREPKAPDLNIESADVSL----DDVREADILWFTLTGFSEEPSRGTHREILTTRAN-RRHTIFDLDYRPMFWESPE 183 (319)
T ss_dssp CEEEECCSCCGGGGCCGGGSCH----HHHHHCSEEEEEGGGGSSTTHHHHHHHHHHHHTT-CSCEEEECCCCGGGSSCHH
T ss_pred eEEEecCCCcccccCChhhCCH----HHhccCCEEEEecccccCchhHHHHHHHHHHHHH-CCcEEEeCCCChhhcCCHH
Confidence 765553 23 45667776653 56789999999998754332 455666676655 556677874 33332 2
Q ss_pred hhhHHHHhhcCCCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEec
Q 022475 156 FFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPV 235 (296)
Q Consensus 156 ~~~~~~~~~l~~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~ 235 (296)
...+.++++++++|++++|++|++.+++ .++++++++.|. +.|++.+++|+|++|++++++++.+++|+
T Consensus 184 ~~~~~~~~~l~~~dil~~N~~E~~~l~g-----~~~~~~~~~~l~------~~g~~~vvvt~G~~G~~~~~~~~~~~~~~ 252 (319)
T 3pl2_A 184 EATKQAEWALQHSTVAVGNKEECEIAVG-----ETEPERAGRALL------ERGVELAIVKQGPKGVMAMTKDETVEVPP 252 (319)
T ss_dssp HHHHHHHHHHTTCSEEEECHHHHHHHHS-----CCSHHHHHHHHH------HTTCSEEEEEEETTEEEEECSSCEEEECC
T ss_pred HHHHHHHHHHHhCCEEEcCHHHHHHHcC-----CCCHHHHHHHHH------hcCCCEEEEEECCCCeEEEECCceEEeCC
Confidence 2466788899999999999999999986 457888888884 56789999999999999999988999888
Q ss_pred ccCCCccccCCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccC--CCCCCCCC
Q 022475 236 ILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGC--TYPPKPEF 295 (296)
Q Consensus 236 ~~~~~~~vvd~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~--~~~~~~~~ 295 (296)
+++ +++|||||||+|+|||+++|++|+++++|+++|+++|+.++++.|+ .+|+++|+
T Consensus 253 ~~v---~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev 311 (319)
T 3pl2_A 253 FFV---DVINGLGAGDAFGGALCHGLLSEWPLEKVLRFANTAGALVASRLECSTAMPTTDEV 311 (319)
T ss_dssp CCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSCSGGGCCCHHHH
T ss_pred ccc---CCCCCcCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhccCCcCCCCCHHHH
Confidence 765 7999999999999999999999999999999999999999999998 57887654
No 22
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=100.00 E-value=1.1e-42 Score=301.78 Aligned_cols=265 Identities=20% Similarity=0.238 Sum_probs=215.9
Q ss_pred hhcCCCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEe-cCCCCceeEEEE--Ee-
Q 022475 5 LASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVC--VV- 80 (296)
Q Consensus 5 ~~~~~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~--~~- 80 (296)
+.+..+....+||++.|+|+++++ +|.++.++|.+|+|.+|+.+++.|+++||+++++. .++.+|+.+++. ++
T Consensus 22 ~~~~~~~~~~~GG~~~N~A~~la~---LG~~~~~i~~vG~D~~g~~~~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~~ 98 (313)
T 2v78_A 22 LRFVNYFEKHVAGSELNFCIAVVR---NHLSCSLIARVGNDEFGKNIIEYSRAQGIDTSHIKVDNESFTGIYFIQRGYPI 98 (313)
T ss_dssp GGGCCEEEEEEECHHHHHHHHHHH---TTCCEEEEEEEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCCEEEEEESSSS
T ss_pred ccccceeEecCCChHHHHHHHHHH---CCCcEEEEEEeCCCHHHHHHHHHHHHcCCcCceEEEcCCCCceEEEEEEecCC
Confidence 344556778999999999999997 45999999999999999999999999999999985 566789999988 76
Q ss_pred CCeeceeecc--ccccccCccccCChhhhhhhhcceEEEEeccccc---cChHHHHHHHHHHhhCCCEEEEeCC--chhh
Q 022475 81 GGERSLVANL--SAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLT---VSPESIQMVAEHAAAKNKVFMMNLS--APFI 153 (296)
Q Consensus 81 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~---~~~~~~~~~~~~~~~~~~~~~~d~~--~~~~ 153 (296)
+|++++..+. ++...++++++.. ..+.++|++|++++.+. .+.+.+..+++.+++. ++|+. ...|
T Consensus 99 ~g~~~~~~~~~~~a~~~l~~~~~~~----~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~----~~D~~~~~~~~ 170 (313)
T 2v78_A 99 PMKSELVYYRKGSAGSRLSPEDINE----NYVRNSRLVHSTGITLAISDNAKEAVIKAFELAKSR----SLDTNIRPKLW 170 (313)
T ss_dssp TTCEEEEEECTTCSGGGCCGGGCCH----HHHHTSSEEEEEHHHHHHCHHHHHHHHHHHHHCSSE----EEECCCCGGGS
T ss_pred CCCeeEEEeCCcChhHhCChhhCCH----HHhcCCCEEEEcCchhhcChHHHHHHHHHHHHHHHh----CcCCcCChhhc
Confidence 6777765442 4556777776653 45788999999987653 2235666677776654 56664 3334
Q ss_pred h--hhhhHHHHhhcCCCc--EEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCe
Q 022475 154 C--EFFREPQEKALPYMD--YVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGK 229 (296)
Q Consensus 154 ~--~~~~~~~~~~l~~~d--v~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~ 229 (296)
. ....+.++++++++| ++++|++|++.+++ .++++++++.+. ..|++.+++|+|++|++++++++
T Consensus 171 ~~~~~~~~~~~~~l~~~d~~il~~N~~E~~~l~g-----~~~~~~~~~~l~------~~g~~~vvvt~G~~G~~~~~~~~ 239 (313)
T 2v78_A 171 SSLEKAKETILSILKKYDIEVLITDPDDTKILLD-----VTDPDEAYRKYK------ELGVKVLLYKLGSKGAIAYKDNV 239 (313)
T ss_dssp SCHHHHHHHHHHHHHHSCEEEEEECHHHHHHHHS-----CCCHHHHHHHHH------HTTEEEEEEECGGGCEEEEETTE
T ss_pred CCHHHHHHHHHHHHHhcCeeEEECcHHHHHHHhC-----CCCHHHHHHHHH------hCCCCEEEEEECCCCcEEeeCCc
Confidence 2 223456778899999 99999999999986 457888888884 46789999999999999999888
Q ss_pred EEEEecccCCCccccCCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccCC--CCCCCC
Q 022475 230 VKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCT--YPPKPE 294 (296)
Q Consensus 230 ~~~~~~~~~~~~~vvd~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~~--~~~~~~ 294 (296)
.+++|++++ +++|||||||+|+|||+++|++|+++++|+++|+++|+.++++.|+. .|++++
T Consensus 240 ~~~~~~~~v---~vvDttGAGDaF~ag~~~~l~~g~~~~~a~~~a~~~aa~~v~~~G~~~~~~~~~~ 303 (313)
T 2v78_A 240 KAFKDAYKV---PVEDPTGAGDAMAGTFVSLYLQGKDIEYSLAHGIAASTLVITVRGDNELTPTLED 303 (313)
T ss_dssp EEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSSTTCCCHHH
T ss_pred EEEeCCCcC---CccCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCCCCCCCCCHHH
Confidence 888887665 79999999999999999999999999999999999999999999984 476554
No 23
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=100.00 E-value=1.7e-42 Score=302.35 Aligned_cols=261 Identities=18% Similarity=0.229 Sum_probs=214.5
Q ss_pred CceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEe-cCCCCceeEEEEEe-CCeecee
Q 022475 10 NVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLV 87 (296)
Q Consensus 10 ~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~~~~~~~ 87 (296)
.....+||++.|+|+++++ +|.++.++|.+|+|.+|+.+++.|++.||+++++. .++.+|+.++++++ +|+|++.
T Consensus 36 ~~~~~~GG~~~NvA~~la~---LG~~v~~i~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~ 112 (328)
T 3kzh_A 36 HVKISFGGVCRNIAENMAR---VGVNTNFMSILGNDEHGKSIVEHSKKIGYHMDDSMVIEGGSTPTYLAILDENGEMVSA 112 (328)
T ss_dssp EEEEEEECHHHHHHHHHHH---TTCCEEEECEECSSHHHHHHHHHHHHHTEECTTCEECTTCCCCEEEEEECTTSCEEEE
T ss_pred EEEEccCcHHHHHHHHHHH---cCCCcEEEEEecCcHHHHHHHHHHHHcCCCccceEEeCCCCCeeEEEEEcCCCCEEEE
Confidence 4678999999999999997 45999999999999999999999999999999874 67778999999998 6888763
Q ss_pred -eccccccccCccccCChhhhhhhhcceEEEEeccccccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhhcC
Q 022475 88 -ANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP 166 (296)
Q Consensus 88 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~ 166 (296)
...+....++++.+.. ..+.+..++++++++. .++.+..+++ +++.++++++|+..... .+.++++++
T Consensus 113 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~----~~~~~~~l~~-a~~~~~~v~~D~~~~~~----~~~~~~~l~ 181 (328)
T 3kzh_A 113 IADMKSIGAMNTDFIDS--KREIFENAEYTVLDSD----NPEIMEYLLK-NFKDKTNFILDPVSAEK----ASWVKHLIK 181 (328)
T ss_dssp EEECGGGGGCCHHHHHH--THHHHHTCSEEEEESS----CHHHHHHHHH-HHTTTSEEEEECCSHHH----HHTSTTTGG
T ss_pred EEchhhhhhCCHHHHHH--HHHhhccCCEEEEeCC----cHHHHHHHHH-HhhcCCcEEEEeCCHHH----HHHHHHHhc
Confidence 3445444555554432 3356789999999863 2367777777 78899999999975442 234556788
Q ss_pred CCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecccCCCccccCC
Q 022475 167 YMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDT 246 (296)
Q Consensus 167 ~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvd~ 246 (296)
++|++++|++|++.+++....+.++++++++.+. +.|++.+++|+|++|++++++++.+++|++++ +++||
T Consensus 182 ~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~------~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdt 252 (328)
T 3kzh_A 182 DFHTIKPNRHEAEILAGFPITDTDDLIKASNYFL------GLGIKKVFISLDADGIFYNDGVSCGKIKATEV---DVKNV 252 (328)
T ss_dssp GCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHHH------HHTCCEEEEECGGGCEEEECSSCEEEEEESSC---CCSCC
T ss_pred CCcEEeCCHHHHHHHHCCCCCCHHHHHHHHHHHH------HhCCCEEEEEeCCCCEEEEeCCceEEecCCCc---ccCCC
Confidence 9999999999999999754433446677777774 45789999999999999999988999988765 79999
Q ss_pred CCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccCC--CCCCC
Q 022475 247 NGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCT--YPPKP 293 (296)
Q Consensus 247 tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~~--~~~~~ 293 (296)
|||||+|+|||+++|++|+++++|+++|+++|+.++++.|+. .|+++
T Consensus 253 tGAGDaf~ag~~~~l~~g~~~~~a~~~A~a~aa~~v~~~G~~~~~~~~~ 301 (328)
T 3kzh_A 253 TGAGDSFVAGLGYGYMNKMPIEDIVKFAMTMSNITISHEETIHPDMALD 301 (328)
T ss_dssp TTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSSCTTCSHH
T ss_pred CChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCCCCCCcCCHH
Confidence 999999999999999999999999999999999999999984 34443
No 24
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=100.00 E-value=2e-41 Score=296.18 Aligned_cols=268 Identities=19% Similarity=0.229 Sum_probs=214.9
Q ss_pred CCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEe-cC-CCCceeEEEEEe-CCeec
Q 022475 9 ENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DE-SAPTGTCAVCVV-GGERS 85 (296)
Q Consensus 9 ~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~-~~~t~~~~~~~~-~~~~~ 85 (296)
.+....+||++.|+|+++++ +|.++.++|.+|+|.+|+.+++.|+++||+++++. .+ +.+|+.+++.++ +++++
T Consensus 37 ~~~~~~~GG~~~NvA~~la~---LG~~~~~i~~vG~D~~G~~l~~~L~~~gV~~~~v~~~~~~~~t~~~~v~~~~~g~~~ 113 (332)
T 2qcv_A 37 MTFSKYVGGSPANIVIGSSK---LGLKAGFIGKIADDQHGRFIESYMRGVGVDTSNLVVDQEGHKTGLAFTEIKSPEECS 113 (332)
T ss_dssp CCEEEEEESHHHHHHHHHHH---TTCCEEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCCEEEEEEEETTEEE
T ss_pred ceeEecCCCHHHHHHHHHHH---cCCceEEEEEeCCCHHHHHHHHHHHHcCCCCcceEecCCCCCceEEEEEEcCCCCcc
Confidence 46678999999999999998 45999999999999999999999999999999985 43 357888888766 67776
Q ss_pred eeecc--ccccccCccccCChhhhhhhhcceEEEEecccccc--ChHHHHHHHHHHhhCCCEEEEeCCch--hhh--hhh
Q 022475 86 LVANL--SAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTV--SPESIQMVAEHAAAKNKVFMMNLSAP--FIC--EFF 157 (296)
Q Consensus 86 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~--~~~ 157 (296)
++.+. +++..++++++.. ..+.++|++|++|+.+.. +.+.+..+++.+++.++++++|+... .|. ...
T Consensus 114 ~~~~~~~~a~~~l~~~~~~~----~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~ 189 (332)
T 2qcv_A 114 ILMYRQDVADLYLSPEEVNE----AYIRRSKLLLVSGTALSKSPSREAVLKAIRLAKRNDVKVVFELDYRPYSWETPEET 189 (332)
T ss_dssp EEEECTTCGGGGCCGGGCCH----HHHTTEEEEEEEGGGGSSTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHH
T ss_pred EEEECCcchhhhCCHhHCCH----HHHccCCEEEEeCccccCchhHHHHHHHHHHHHHCCCEEEEcCcCchhhcCCHHHH
Confidence 64433 3455666666653 346889999999976432 23678889999999999999998642 221 123
Q ss_pred hHHHHhhcCCCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEEC-CeEEEEecc
Q 022475 158 REPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAED-GKVKLFPVI 236 (296)
Q Consensus 158 ~~~~~~~l~~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~-~~~~~~~~~ 236 (296)
.+.++.+++++|++++|++|++.|++... .++..++++.+ ...|++.+++|+|++|++++++ ++.+++|++
T Consensus 190 ~~~~~~ll~~~dil~~N~~E~~~l~g~~~--~~~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~ 261 (332)
T 2qcv_A 190 AVYYSLVAEQSDIVIGTREEFDVLENRTE--KGDNDETIRYL------FKHSPELIVIKHGVEGSFAYTKAGEAYRGYAY 261 (332)
T ss_dssp HHHHHHHHHHCSEEEEEHHHHHHHTTCSS--CCCHHHHHHHH------TTSSCSEEEEECGGGCEEEEETTSCEEEECCB
T ss_pred HHHHHHHHHhCCEEEccHHHHHHHhCCCc--CCCHHHHHHHH------HHcCCCEEEEEECCcceEEEecCCceEEcCCC
Confidence 45567788999999999999999986422 24667778887 4668899999999999999987 678888876
Q ss_pred cCCCccccCCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccCC--CCCCCC
Q 022475 237 LLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCT--YPPKPE 294 (296)
Q Consensus 237 ~~~~~~vvd~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~~--~~~~~~ 294 (296)
++ +++|||||||+|+|||+++|++|+++++|+++|+++|+.++++.|+. .|++++
T Consensus 262 ~v---~vvdt~GAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~e 318 (332)
T 2qcv_A 262 KT---KVLKTFGAGDSYASAFLYALISGKGIETALKYGSASASIVVSKHSSSDAMPSVEE 318 (332)
T ss_dssp CC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHC-----CCCCHHH
T ss_pred Cc---cccCCCCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHccCCCccCCCCHHH
Confidence 55 79999999999999999999999999999999999999999999983 677554
No 25
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=100.00 E-value=2.7e-42 Score=299.07 Aligned_cols=263 Identities=20% Similarity=0.216 Sum_probs=215.1
Q ss_pred hcCCCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEe-cCCCCceeEEEEEe-CCe
Q 022475 6 ASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGE 83 (296)
Q Consensus 6 ~~~~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~~~ 83 (296)
.+..+....+||++.|+|+++++ +|.++.++|.+|+|.+|+.+++.|+++||+++++. .++.+|+.+++.++ +|+
T Consensus 23 ~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~ 99 (311)
T 2dcn_A 23 RHVSYFEKHVAGSEANYCVAFIK---QGNECGIIAKVGDDEFGYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVP 99 (311)
T ss_dssp GGCCEEEEEEECHHHHHHHHHHH---TTCEEEEECEEESSHHHHHHHHHHHHTTCBCTTCEEETTSCCCEEEEEESCSST
T ss_pred cccceeeecCCChHHHHHHHHHH---CCCceEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEECCCCC
Confidence 44556778999999999999997 45999999999999999999999999999999885 56778999998887 677
Q ss_pred --eceeec--cccccccCccccCChhhhhhhhcceEEEEeccccc---cChHHHHHHHHHHhhCCCEEEEeCC--chhhh
Q 022475 84 --RSLVAN--LSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLT---VSPESIQMVAEHAAAKNKVFMMNLS--APFIC 154 (296)
Q Consensus 84 --~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~---~~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~ 154 (296)
|+++.+ .++...++++++.. ..+.++|++|++++.+. .+.+.+..+++.+++. ++|+. ...|.
T Consensus 100 ~~~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~----~~D~~~~~~~~~ 171 (311)
T 2dcn_A 100 LKSESIYYRKGSAGSKLSPEDVDE----EYVKSADLVHSSGITLAISSTAKEAVYKAFEIASNR----SFDTNIRLKLWS 171 (311)
T ss_dssp TCEEEEEECTTCTGGGCCGGGCCH----HHHTTCSEEEEEHHHHHSCHHHHHHHHHHHHHCSSE----EEECCCCTTTSC
T ss_pred ccceEEEecCcChhhhCChhhcCh----HHHcCCCEEEEeCcccccChHHHHHHHHHHHHHHHh----CcCccCchhhCC
Confidence 776543 34556777776653 45788999999987653 2335667777776654 56664 33342
Q ss_pred -hhhhHHHHhhcC--CCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEE
Q 022475 155 -EFFREPQEKALP--YMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVK 231 (296)
Q Consensus 155 -~~~~~~~~~~l~--~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~ 231 (296)
....+.++++++ ++|++++|++|++.+++ .++++++++.+ ... ++.+++|+|++|++++++++.+
T Consensus 172 ~~~~~~~~~~~l~~~~~dil~~N~~E~~~l~g-----~~~~~~~~~~l------~~~-~~~vvvt~G~~G~~~~~~~~~~ 239 (311)
T 2dcn_A 172 AEEAKREILKLLSKFHLKFLITDTDDSKIILG-----ESDPDKAAKAF------SDY-AEIIVMKLGPKGAIVYYDGKKY 239 (311)
T ss_dssp HHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHS-----CCCHHHHHHHH------TTT-EEEEEEEEETTEEEEEETTEEE
T ss_pred hHHHHHHHHHHHhhcCCcEEECCHHHHHHHhC-----CCCHHHHHHHH------HHh-CCEEEEEECCCCcEEEeCCcEE
Confidence 223456778889 99999999999999986 45788888888 456 8899999999999999999888
Q ss_pred EEecccCCCccccCCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccCC--CCCCCC
Q 022475 232 LFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCT--YPPKPE 294 (296)
Q Consensus 232 ~~~~~~~~~~~vvd~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~~--~~~~~~ 294 (296)
++|++++ +++|||||||+|+|||+++|++|+++++|+++|+++|+.++++.|+. .|++++
T Consensus 240 ~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~a~~~aa~~v~~~G~~~~~~~~~~ 301 (311)
T 2dcn_A 240 YSSGYQV---PVEDVTGAGDALGGTFLSLYYKGFEMEKALDYAIVASTLNVMIRGDQENLPTTKD 301 (311)
T ss_dssp EEECCCC---CCSCCTTHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHTTSSSSSTTCCCHHH
T ss_pred EeCCccc---cccCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCCCCCCCCCHHH
Confidence 8887665 79999999999999999999999999999999999999999999984 476654
No 26
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=100.00 E-value=7.1e-43 Score=300.96 Aligned_cols=247 Identities=19% Similarity=0.247 Sum_probs=214.1
Q ss_pred CCCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEecCCCCceeEEEEEe-CCeece
Q 022475 8 KENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV-GGERSL 86 (296)
Q Consensus 8 ~~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~~~~~~ 86 (296)
..+....+||++.|+|+++++ +|.++.++|.+|+|.+|+.+++.|+++||++++++.++.+|+.++++++ +|+|++
T Consensus 31 ~~~~~~~~GG~~~NvA~~la~---lG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~T~~~~~~~~~~g~~~~ 107 (299)
T 3ikh_A 31 GVKVSQDIGGKGANQAIILSR---CGIETRLIAATGNDSNGAWIRQQIKNEPLMLLPDGHFNQHSDTSIILNSADGDNAI 107 (299)
T ss_dssp CEEEEEEEECHHHHHHHHHHH---TTCCEEEECCCCSSHHHHHHHHHGGGSSCEEESSSCCSSCCEEEEEECSSSCSCEE
T ss_pred eeeeeeccCCHHHHHHHHHHH---CCCCeEEEEEECCCHHHHHHHHHHHHcCCceeeeEecCCCCcEEEEEEcCCCCeEE
Confidence 345678999999999999997 4599999999999999999999999999999998767789999999987 789988
Q ss_pred eeccccccccCccccCChhhhhhhhcceEEEEeccccccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhhcC
Q 022475 87 VANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP 166 (296)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~ 166 (296)
+.+.+++..++++++.. ..+.+.++|++++++ ..+.+.+..+++.+++.++++++|+.... +.+..+++
T Consensus 108 ~~~~~a~~~l~~~~~~~--~~~~~~~~~~v~~~g---~~~~~~~~~~~~~a~~~g~~v~~D~~~~~------~~~~~ll~ 176 (299)
T 3ikh_A 108 ITTTAAADTFSLDEMIP--HMADAVAGDILLQQG---NFSLDKTRALFQYARSRGMTTVFNPSPVN------PDFCHLWP 176 (299)
T ss_dssp EEECHHHHHCCHHHHGG--GGTTCCTTCEEEECS---CSCHHHHHHHHHHHHHTTCEEEECCCSCC------GGGGGCGG
T ss_pred EEeCCccccCCHHHHHH--HHhhhccCCEEEECC---CCCHHHHHHHHHHHHHcCCEEEEccccch------hhHHHHHh
Confidence 87777777787776643 234578999999986 44678889999999999999999996532 34567889
Q ss_pred CCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecccCCCccccCC
Q 022475 167 YMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDT 246 (296)
Q Consensus 167 ~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvd~ 246 (296)
++|++++|++|++.|++ .|++.+++|+|++|++++++++.+++|++++ +++||
T Consensus 177 ~~dil~~N~~E~~~l~g------------------------~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvDt 229 (299)
T 3ikh_A 177 LIDIAVVNESEAELLQP------------------------YGVKTLVITQGAAGAWLVQEGQRQFCPAVPA---EALDT 229 (299)
T ss_dssp GCSEEEEEHHHHHHHCC------------------------CSCSEEEEECGGGCEEEECSSCEEEECCCCC---CCSCC
T ss_pred hCCEEEecHHHHHHHhc------------------------CCCCEEEEEECCCceEEEeCCceEEeCCCCC---ccCCC
Confidence 99999999999988752 3568999999999999999888999887765 79999
Q ss_pred CCCchhhhH-HHHHHHhcCCCHHH-HHHHhhHHhhhhhhhccCC--CCCCCCC
Q 022475 247 NGAGDAFVG-GFLSQLVQEKPVED-CVRTGCYAANVVIQRSGCT--YPPKPEF 295 (296)
Q Consensus 247 tGaGDaf~a-g~~~~l~~~~~~~~-a~~~A~~~aa~~~~~~G~~--~~~~~~~ 295 (296)
|||||+|+| ||+++|++|+++++ |+++|+++|+.++++.|+. +|+++|+
T Consensus 230 tGAGDaf~a~~~~~~l~~g~~~~~~a~~~a~~~aa~~v~~~G~~~~~p~~~ev 282 (299)
T 3ikh_A 230 TGAGDTFLAVMLASALLRGVAPDALALAHASRAAAITVSRRGTLSAFPGSREL 282 (299)
T ss_dssp TTHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHSSSSTTTSCCHHHH
T ss_pred CCchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCCcccccCCCHHHH
Confidence 999999999 99999999999999 9999999999999999983 5776653
No 27
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=100.00 E-value=5e-42 Score=299.57 Aligned_cols=267 Identities=14% Similarity=0.177 Sum_probs=211.5
Q ss_pred hhcCCCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEecCCCCceeEEEEEeCCee
Q 022475 5 LASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGER 84 (296)
Q Consensus 5 ~~~~~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~~~~ 84 (296)
..+..+....+||++.|+|+++++ + |.++.++|.+|+ .+|+.+++.|+++||+++++...+ .|+.++.+++.+++
T Consensus 45 ~~~~~~~~~~~GG~~~NvA~~la~-L--G~~~~~i~~vG~-~~G~~l~~~L~~~gV~~~~v~~~~-~t~~~~~~v~~~~~ 119 (330)
T 2jg1_A 45 VNRVQEVSKTAGGKGLNVTRVLAQ-V--GEPVLASGFIGG-ELGQFIAKKLDHADIKHAFYNIKG-ETRNCIAILHEGQQ 119 (330)
T ss_dssp EEEESCCEEEEECHHHHHHHHHHH-H--TCCEEEEEEEEH-HHHHHHHHHHHHTTCEECCEEESS-CCEEEEEEEETTEE
T ss_pred eEEeceEEEcCCchHHHHHHHHHH-h--CCCeEEEEEecc-hhHHHHHHHHHHCCCceeEEEccC-CCeeEEEEEeCCCc
Confidence 344557888999999999999998 3 499999999997 599999999999999999986543 47888877775565
Q ss_pred ceeeccccccccCccccCC--hhhhhhhhcceEEEEecccc-ccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHH
Q 022475 85 SLVANLSAANCYKSEHLKR--PEIWSIVEKAKYYYIAGFFL-TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQ 161 (296)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~g~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 161 (296)
+++...++ .++++.++. ..+.+.+.++|++|++|+.. ..+.+.+..+++.++++++++++|+... .+
T Consensus 120 ~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~--------~l 189 (330)
T 2jg1_A 120 TEILEQGP--EIDNQEAAGFIKHFEQMMEKVEAVAISGSLPKGLNQDYYAQIIERCQNKGVPVILDCSGA--------TL 189 (330)
T ss_dssp EEEEECCC--BCCHHHHHHHHHHHHHHGGGCSEEEEESCCCBTSCTTHHHHHHHHHHTTTCCEEEECCHH--------HH
T ss_pred EEEECCCC--CCCHHHHHHHHHHHHHhcCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCcH--------HH
Confidence 54443332 354444332 01113467899999998664 3456788899999999999999999643 24
Q ss_pred HhhcC---CCcEEEcCHHHHHHHHHHcCC-CCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccc
Q 022475 162 EKALP---YMDYVFGNETEARTFAKVHGW-ETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVIL 237 (296)
Q Consensus 162 ~~~l~---~~dv~~~n~~E~~~l~~~~~~-~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~ 237 (296)
.++++ ++|++++|++|++.+++.... +.++++++++.+ .+.|++.+++|+|++|++++++++.+++|+++
T Consensus 190 ~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~l------~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~ 263 (330)
T 2jg1_A 190 QTVLENPYKPTVIKPNISELYQLLNQPLDESLESLKQAVSQP------LFEGIEWIIVSLGAQGAFAKHNHTFYRVNIPT 263 (330)
T ss_dssp HHHHTSSSCCSEECCBHHHHHHHTTSCCCCCHHHHHHHHHSG------GGTTCSEEEEECGGGCEEEEETTEEEEEECCC
T ss_pred HHHHhccCCceEEEeCHHHHHHHhCCCCCCCHHHHHHHHHHH------HHcCCCEEEEeecCCceEEEeCCCEEEEeCCC
Confidence 45565 899999999999999864321 123455556655 45688999999999999999998888888766
Q ss_pred CCCccccCCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccCCCCCCCCC
Q 022475 238 LPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEF 295 (296)
Q Consensus 238 ~~~~~vvd~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~~~~~~~~~ 295 (296)
+ +++|||||||+|+|||+++|++|+++++|+++|+++|+.++++.|+..|+++++
T Consensus 264 v---~vvDttGAGDaF~ag~~~~l~~g~~l~~al~~A~a~aa~~v~~~G~~~~~~~ev 318 (330)
T 2jg1_A 264 I---SVLNPVGSGDSTVAGITSAILNHENDHDLLKKANTLGMLNAQEAQTGYVNLNNY 318 (330)
T ss_dssp C---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSSCCCGGGH
T ss_pred c---cccCCCcHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcCCCCCCHHHH
Confidence 5 899999999999999999999999999999999999999999999988887764
No 28
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=5.7e-42 Score=297.72 Aligned_cols=262 Identities=22% Similarity=0.251 Sum_probs=211.6
Q ss_pred ceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEecCCCCceeEEEEEe-CCeeceeec
Q 022475 11 VEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV-GGERSLVAN 89 (296)
Q Consensus 11 ~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~~~~~~~~~ 89 (296)
....+||++.|+|+++++ +|.++.++|.+|+|.+|+.+++.|+++||++++++.++.+|+.++++++ +|++++...
T Consensus 34 ~~~~~GG~~~NvA~~la~---LG~~~~~i~~vG~D~~G~~l~~~L~~~gV~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~ 110 (317)
T 2nwh_A 34 WMEEAGGGGFNAARNLSR---LGFEVRIIAPRGGDVTGEVVAEAARQAGVEDTPFTFLDRRTPSYTAILERDGNLVIALA 110 (317)
T ss_dssp EEEEEECHHHHHHHHHHH---TTCEEEEECEEESSHHHHHHHHHHHHTTCEECCEEETTSCCCEEEEEECTTSCEEEEEE
T ss_pred EEEeCCcHHHHHHHHHHh---cCCCcEEEEeecCCchHHHHHHHHHHcCCCCCCcccCCCCCceEEEEEcCCCCEEEEEc
Confidence 567899999999999998 4599999999999999999999999999999996677789999999987 688876544
Q ss_pred c-ccccccCccccCChhhhhhhhcceEEEEeccccccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhhcCCC
Q 022475 90 L-SAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYM 168 (296)
Q Consensus 90 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~ 168 (296)
. +.+..++++.+......+.+..++++++++ ..+.+.+..+++.+++.++++++|+.... ..+.++++++++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~----~~~~~~~ll~~~ 183 (317)
T 2nwh_A 111 DMDLYKLFTPRRLKVRAVREAIIASDFLLCDA---NLPEDTLTALGLIARACEKPLAAIAISPA----KAVKLKAALGDI 183 (317)
T ss_dssp ECGGGGGCCHHHHTSHHHHHHHHHCSEEEEET---TSCHHHHHHHHHHHHHTTCCEEEECCSHH----HHGGGTTTGGGC
T ss_pred chHHHhhCCHHHhhhhhhhhHhccCCEEEEeC---CCCHHHHHHHHHHHHhcCCeEEEeCCCHH----HHHHHHHHhhhC
Confidence 3 334456666554311114578899999985 34678889999999999999999997532 123456788999
Q ss_pred cEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECC-eEEEEecccCCCccccCCC
Q 022475 169 DYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDG-KVKLFPVILLPKEKLVDTN 247 (296)
Q Consensus 169 dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~-~~~~~~~~~~~~~~vvd~t 247 (296)
|++++|.+|++.|++. +.++++++++.+. ..|++.+++|+|++|+++++++ +.+++|++++ +++|||
T Consensus 184 dil~~N~~E~~~l~g~---~~~~~~~~~~~l~------~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v---~~vdt~ 251 (317)
T 2nwh_A 184 DILFMNEAEARALTGE---TAENVRDWPNILR------KAGLSGGVVTRGASEVVAFNGTEKAILHPPLIR---EVKDVT 251 (317)
T ss_dssp SEEEEEHHHHHHHHC--------CTTHHHHHH------HTTCCCEEEEETTTEEEEECSSCEEEECCCCSS---SCSCCC
T ss_pred eEecCCHHHHHHHhCC---ChhHHHHHHHHHH------HcCCCEEEEEECCCcEEEEcCCCceEEeCCCCc---cccCCC
Confidence 9999999999999864 2244556777773 4578899999999999998766 4577776554 899999
Q ss_pred CCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccCC--CCCCCC
Q 022475 248 GAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCT--YPPKPE 294 (296)
Q Consensus 248 GaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~~--~~~~~~ 294 (296)
||||+|+|||+++|++|+++++|+++|+++|+.++++.|+. .|++++
T Consensus 252 GAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~~~~~~ 300 (317)
T 2nwh_A 252 GAGDAMASGYLAAIAEGKTIREALRQGAAAAAITVQSSFATSQDLSKDS 300 (317)
T ss_dssp CSSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHSSTTCCGGGCCHHH
T ss_pred ChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 99999999999999999999999999999999999999984 456544
No 29
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=100.00 E-value=3.9e-42 Score=299.21 Aligned_cols=264 Identities=17% Similarity=0.191 Sum_probs=214.1
Q ss_pred HhhhcCCCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEE-ecCCCCceeEEEEEeC
Q 022475 3 DELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYY-EDESAPTGTCAVCVVG 81 (296)
Q Consensus 3 ~~~~~~~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~-~~~~~~t~~~~~~~~~ 81 (296)
++..+..+.+..+||++.|+|+++++ + |.++.++|.+|+| +|+.+++.|+++||+++++ +.++ +|+.+++++++
T Consensus 26 g~~~~~~~~~~~~GG~~~NvA~~la~-L--G~~~~~i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~~-~t~~~~~~~~~ 100 (320)
T 3ie7_A 26 RKTNRVIKTEFDCGGKGLHVSGVLSK-F--GIKNEALGIAGSD-NLDKLYAILKEKHINHDFLVEAGT-STRECFVVLSD 100 (320)
T ss_dssp TSCCCCSEEEEEEESHHHHHHHHHHH-H--TCCEEEEEEEEST-THHHHHHHHHHTTCCBCCEEETTC-CCEEEEEEEET
T ss_pred CCeeEeceeeecCCchHHHHHHHHHH-c--CCCeEEEEEecCc-hHHHHHHHHHHcCCceEEEEecCC-CCceEEEEEEC
Confidence 34555667889999999999999998 3 4999999999998 9999999999999999999 5554 89999998888
Q ss_pred Ce--eceeeccccccccCccccCC--hhhhhhhhcceEEEEecccc-ccChHHHHHHHHHHhhCCCEEEEeCCchhhhhh
Q 022475 82 GE--RSLVANLSAANCYKSEHLKR--PEIWSIVEKAKYYYIAGFFL-TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEF 156 (296)
Q Consensus 82 ~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~g~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 156 (296)
|+ |+++...++ .++++.+.. ....+.+.++|++|++|+.. ..+.+.+..+++.+++.++++++|+....
T Consensus 101 g~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~---- 174 (320)
T 3ie7_A 101 DTNGSTMIPEAGF--TVSQTNKDNLLKQIAKKVKKEDMVVIAGSPPPHYTLSDFKELLRTVKATGAFLGCDNSGEY---- 174 (320)
T ss_dssp TCSCCEEEECCCC--CCCHHHHHHHHHHHHHHCCTTCEEEEESCCCTTCCHHHHHHHHHHHHHHTCEEEEECCHHH----
T ss_pred CCceeEEEeCCCC--CCCHHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCEEEEECChHH----
Confidence 88 777655442 455544432 11234578899999998764 34568889999999999999999996432
Q ss_pred hhHHHHhhcC-CCcEEEcCHHHHHHHHHHcCCCCC-CHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEe
Q 022475 157 FREPQEKALP-YMDYVFGNETEARTFAKVHGWETD-NVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFP 234 (296)
Q Consensus 157 ~~~~~~~~l~-~~dv~~~n~~E~~~l~~~~~~~~~-~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~ 234 (296)
+.+.++ ++|++++|++|++.+++.. .. +.+++.+.+ .. ++.+++|+|++|++++++++.+++|
T Consensus 175 ----l~~~l~~~~dil~~N~~E~~~l~g~~---~~~~~~~~~~~~------~~--~~~vvvt~G~~G~~~~~~~~~~~~~ 239 (320)
T 3ie7_A 175 ----LNLAVEMGVDFIKPNEDEVIAILDEK---TNSLEENIRTLA------EK--IPYLVVSLGAKGSICAHNGKLYQVI 239 (320)
T ss_dssp ----HHHHHHHCCSEECCBTTGGGGGSCTT---CCCHHHHHHHHT------TT--CSEEEEECGGGCEEEEETTEEEEEE
T ss_pred ----HHHHHhcCCeEEeeCHHHHHHHhCCC---cCCCHHHHHHHH------hh--CCEEEEEcCCCceEEEeCCcEEEEe
Confidence 344454 8999999999999887532 11 234444433 22 7899999999999999999999998
Q ss_pred cccCCCccccCCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccCCCCCCCCC
Q 022475 235 VILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEF 295 (296)
Q Consensus 235 ~~~~~~~~vvd~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~~~~~~~~~ 295 (296)
++++ +++|||||||+|+|||+++|++|+++++|+++|+++|+.++++.|+..|+++++
T Consensus 240 ~~~v---~vvdttGAGDaF~ag~~~~l~~g~~~~~a~~~A~a~aa~~v~~~G~~~~~~~ev 297 (320)
T 3ie7_A 240 PPKV---QERNDTGAGDVFVGAFIAGLAMNMPITETLKVATGCSASKVMQQDSSSFDLEAA 297 (320)
T ss_dssp CCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSSCCCHHHH
T ss_pred CCcc---CCCCCcCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCcCCCCCCHHHH
Confidence 8765 799999999999999999999999999999999999999999999888886653
No 30
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=100.00 E-value=1e-41 Score=295.08 Aligned_cols=266 Identities=18% Similarity=0.172 Sum_probs=207.4
Q ss_pred hhhcCCCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEecCCCCceeEEEE-Ee-C
Q 022475 4 ELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVC-VV-G 81 (296)
Q Consensus 4 ~~~~~~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~-~~-~ 81 (296)
+..+..+....+||++.|+|+++++ +|.++.++|.+|+| +|+.+++.|+++||+++++...+ .|+.++.+ ++ +
T Consensus 26 ~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~~~~~~ 100 (309)
T 3cqd_A 26 GKLRCTAPVFEPGGGGINVARAIAH---LGGSATAIFPAGGA-TGEHLVSLLADENVPVATVEAKD-WTRQNLHVHVEAS 100 (309)
T ss_dssp SEEECCCCEEEEESHHHHHHHHHHH---TTCCEEEEEEECHH-HHHHHHHHHHHTTCCEEEEECSS-CCCCCEEEEETTT
T ss_pred CeeeccceeecCCchHHHHHHHHHH---cCCCeEEEEEecCc-hHHHHHHHHHHcCCCceeEEcCC-CCeeEEEEEEcCC
Confidence 3445567888999999999999997 45999999999998 99999999999999999986543 36666666 66 6
Q ss_pred CeeceeeccccccccCccccCC--hhhhhhhhcceEEEEecccc-ccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhh
Q 022475 82 GERSLVANLSAANCYKSEHLKR--PEIWSIVEKAKYYYIAGFFL-TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFR 158 (296)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~g~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 158 (296)
|+++++...++ .++++.++. ....+.+.+ |++|++|+.. ..+.+.+..+++.+++.+.++++|+....
T Consensus 101 g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~------ 171 (309)
T 3cqd_A 101 GEQYRFVMPGA--ALNEDEFRQLEEQVLEIESG-AILVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSGEA------ 171 (309)
T ss_dssp CCEEEEECCCC--CCCHHHHHHHHHHHHTSCTT-CEEEEESCCCTTCCHHHHHHHHHHHHTTTCEEEEECCHHH------
T ss_pred CCEEEEEcCCC--CCCHHHHHHHHHHHHHhhcC-CEEEEECCCCCCCCHHHHHHHHHHHHHcCCeEEEECChHH------
Confidence 77766655443 344443322 011233567 9999998654 33467888999999999999999996432
Q ss_pred HHHHh-hcCCC-cEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCC-ceEEEEeeCCCcEEEEECCeEEEEec
Q 022475 159 EPQEK-ALPYM-DYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTH-KRITVITQGADPVVVAEDGKVKLFPV 235 (296)
Q Consensus 159 ~~~~~-~l~~~-dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g-~~~vvvt~G~~G~~~~~~~~~~~~~~ 235 (296)
+.+ +.+++ |++++|.+|++.+++....+.+++.++++.+. ..| ++.+++|+|++|++++++++.+++|+
T Consensus 172 --~~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~------~~g~~~~vvvt~G~~G~~~~~~~~~~~~~~ 243 (309)
T 3cqd_A 172 --LSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIV------NSGKAKRVVVSLGPQGALGVDSENCIQVVP 243 (309)
T ss_dssp --HHHHTTTCCBSEECCBHHHHHHHHTSCCCSTTHHHHHHHHHH------HTTSBSCEEEECGGGCEEEECSSCEEEECC
T ss_pred --HHHHHHhCCCEEEeeCHHHHHHHhCCCCCCHHHHHHHHHHHH------HcCCCCEEEEEecCCceEEEECCceEEEeC
Confidence 233 33788 99999999999998754434456777888874 457 88999999999999998888888877
Q ss_pred ccCCCccccCCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccCCCCCCCC
Q 022475 236 ILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPE 294 (296)
Q Consensus 236 ~~~~~~~vvd~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~~~~~~~~ 294 (296)
+++ +++|||||||+|+|||+++|++|+++++|+++|+++|+.++++.|+..|++++
T Consensus 244 ~~v---~~vdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~~~~~G~~~~~~~~ 299 (309)
T 3cqd_A 244 PPV---KSQSTVGAGDSMVGAMTLKLAENASLEEMVRFGVAAGSAATLNQGTRLCSHDD 299 (309)
T ss_dssp CSC---CCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTC-----CCCHHH
T ss_pred Ccc---ccCCCcCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCcCCCCCCHHH
Confidence 654 79999999999999999999999999999999999999999999998787654
No 31
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=100.00 E-value=2e-41 Score=293.27 Aligned_cols=261 Identities=22% Similarity=0.259 Sum_probs=211.9
Q ss_pred hcCCCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEe-cCCCCceeEEEEEe-CCe
Q 022475 6 ASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGE 83 (296)
Q Consensus 6 ~~~~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~~~ 83 (296)
.+..+....+||++.|+|+++++ + |.++.++|.+|+|.+|+.+++.|+++||+++++. .++ +|+.+++..+ +|+
T Consensus 23 ~~~~~~~~~~GG~~~NvA~~la~-L--G~~~~~~~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~-~t~~~~~~~~~~g~ 98 (309)
T 1v1a_A 23 RGKRLLEVYVGGAEVNVAVALAR-L--GVKVGFVGRVGEDELGAMVEERLRAEGVDLTHFRRAPG-FTGLYLREYLPLGQ 98 (309)
T ss_dssp GGCCEEEEEEECHHHHHHHHHHH-H--TCCEEEEEEECSSHHHHHHHHHHHHHTCBCTTEEECSS-CCCEEEEEECTTSC
T ss_pred cchheeeeecCcHHHHHHHHHHH-c--CCCeEEEEEeCCCHHHHHHHHHHHHcCCCCceEEEcCC-CCEEEEEEECCCCC
Confidence 34456678999999999999998 3 4999999999999999999999999999999985 566 9999998886 677
Q ss_pred eceeecc--ccccccCccccCChhhhhhhhcceEEEEeccccc---cChHHHHHHHHHHhhCCCEEEEeCCc--hhhh-h
Q 022475 84 RSLVANL--SAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLT---VSPESIQMVAEHAAAKNKVFMMNLSA--PFIC-E 155 (296)
Q Consensus 84 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~---~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~-~ 155 (296)
++++.+. ++...++++++.. ..+.++|++|++++.+. .+.+.+..+++.++++++++++|+.. ..|. .
T Consensus 99 ~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~ 174 (309)
T 1v1a_A 99 GRVFYYRKGSAGSALAPGAFDP----DYLEGVRFLHLSGITPALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTLWSPE 174 (309)
T ss_dssp EEEEEECTTCSGGGCCTTSSCG----GGGTTCSEEEEETTGGGSCHHHHHHHHHHHHHHHTTTCEEEEECCCCTTTSCHH
T ss_pred ceEEEeCCCChhhhCCHhhCCh----hHhcCCCEEEEeCchhccCchHHHHHHHHHHHHHHcCCEEEEeCCCCcccCCHH
Confidence 7765432 4556677766653 45788999999998763 23467788999999999999999864 2232 2
Q ss_pred hhhHHHHhhcCCCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEEC-CeEEEEe
Q 022475 156 FFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAED-GKVKLFP 234 (296)
Q Consensus 156 ~~~~~~~~~l~~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~-~~~~~~~ 234 (296)
...+.+.++++++|++++|++|++.+++. + +++++ . .|++.+++|+|++|+++ ++ ++.+++|
T Consensus 175 ~~~~~~~~~l~~~dil~~N~~E~~~l~g~-----~--~~~~~--~-------~g~~~vvvt~G~~G~~~-~~~~~~~~~~ 237 (309)
T 1v1a_A 175 EARGFLERALPGVDLLFLSEEEAELLFGR-----V--EEALR--A-------LSAPEVVLKRGAKGAWA-FVDGRRVEGS 237 (309)
T ss_dssp HHHHHHHHHGGGCSEEEEEHHHHHHHHSS-----H--HHHHH--H-------TCCSEEEEECGGGCEEE-EETTEEEECC
T ss_pred HHHHHHHHHHHhCCEEECcHHHHHHHhCC-----H--HHHHH--h-------cCCCEEEEEecCCCeeE-ecCCcEEEeC
Confidence 23456788999999999999999999852 1 44443 2 35789999999999998 65 6778887
Q ss_pred cccCCCccccCCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccCC--CCCCCC
Q 022475 235 VILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCT--YPPKPE 294 (296)
Q Consensus 235 ~~~~~~~~vvd~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~~--~~~~~~ 294 (296)
++++ +++|||||||+|+|||+++|++|+++++|+++|+++|+.++++.|+. .|++++
T Consensus 238 ~~~v---~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~a~~~aa~~v~~~G~~~~~~~~~~ 296 (309)
T 1v1a_A 238 AFAV---EAVDPVGAGDAFAAGYLAGAVWGLPVEERLRLANLLGASVAASRGDHEGAPYRED 296 (309)
T ss_dssp CCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSTTTTTCCCHHH
T ss_pred CCCC---CcCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCCCCcCCCCHHH
Confidence 7654 79999999999999999999999999999999999999999999984 476544
No 32
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=100.00 E-value=3.5e-42 Score=302.70 Aligned_cols=262 Identities=17% Similarity=0.179 Sum_probs=209.2
Q ss_pred CCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEecCCCCceeEEEEEeCCeece-e
Q 022475 9 ENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSL-V 87 (296)
Q Consensus 9 ~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~~~~~~-~ 87 (296)
.+....+||+ .|+|+++++ +|.++.++|.+|+|.+|+.+++.|+++||++..++.++.+|+.++++++++++.+ +
T Consensus 87 ~~~~~~~GG~-~NvA~~la~---LG~~v~~ig~vG~D~~G~~i~~~L~~~GV~~~~~~~~~~~T~~~~~~~~~~~~~~~~ 162 (352)
T 4e84_A 87 QRQEERLGGA-ANVARNAVT---LGGQAGLLCVVGCDEPGERIVELLGSSGVTPHLERDPALPTTIKLRVLARQQQLLRV 162 (352)
T ss_dssp EEEEEEEEEH-HHHHHHHHH---TTCEEEEEEEEESSHHHHHHHHHHTTTSCEEEEEEETTSCCCEEEEEEESSCEEEEE
T ss_pred eEEEEecChH-HHHHHHHHH---cCCCEEEEEEeCCChhHHHHHHHHHHcCCceeeEECCCCCCceEEEEEcCCceEEEE
Confidence 4567889998 899999998 4599999999999999999999999999999656677789999998888544432 3
Q ss_pred ec-cccccccCccccCChhhhhhhhcceEEEEeccccccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhhcC
Q 022475 88 AN-LSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP 166 (296)
Q Consensus 88 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~ 166 (296)
.. ...+.....+.+ ....+.+.++|++|++|+.. .+.+.+..+++.++++|+++++|++...| .+++
T Consensus 163 ~~~~~~~~~~~~~~~--~~~~~~l~~~~~v~~~g~~~-~~~~~~~~~~~~a~~~g~~v~~D~~~~~~---------~~l~ 230 (352)
T 4e84_A 163 DFEAMPTHEVLLAGL--ARFDVLLPQHDVVLMSDYAK-GGLTHVTTMIEKARAAGKAVLVDPKGDDW---------ARYR 230 (352)
T ss_dssp EECCCCCHHHHHHHH--HHHHHHGGGCSEEEEECCSS-SSCSSHHHHHHHHHHTTCEEEEECCSSCC---------STTT
T ss_pred EcCCCCCHHHHHHHH--HHHHHhcccCCEEEEeCCCC-CCHHHHHHHHHHHHhcCCEEEEECCCcch---------hhcc
Confidence 22 222111211111 11335678999999998652 23344788999999999999999975432 4688
Q ss_pred CCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecccCCCccccCC
Q 022475 167 YMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDT 246 (296)
Q Consensus 167 ~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvd~ 246 (296)
++|++++|++|++.+++ ...+.+++.++++.+. ...|++.+|||+|++|++++++++.+++|++++ +++||
T Consensus 231 ~~dil~pN~~Ea~~l~g-~~~~~~~~~~~a~~l~-----~~~g~~~VvvT~G~~Ga~~~~~~~~~~~pa~~v---~vvDt 301 (352)
T 4e84_A 231 GASLITPNRAELREVVG-QWKSEDDLRARVANLR-----AELDIDALLLTRSEEGMTLFSAGGELHAPALAR---EVFDV 301 (352)
T ss_dssp TCSEECCBHHHHHHHHC-CCSSHHHHHHHHHHHH-----HHHTCSEEEEECGGGCEEEEETTEEEEECCCCS---CCSCC
T ss_pred CCcEEcCCHHHHHHHhC-CCCCHHHHHHHHHHHH-----HHhCCCEEEEEcCCCcEEEEECCceEEecCCCc---CccCC
Confidence 99999999999999987 2222345566666663 124788999999999999999999999988765 89999
Q ss_pred CCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccCCCCCCCCC
Q 022475 247 NGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEF 295 (296)
Q Consensus 247 tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~~~~~~~~~ 295 (296)
|||||+|+|||+++|++|+++++|+++|+++|+.++++.|+..|+++|+
T Consensus 302 tGAGDaF~ag~l~~l~~g~~l~~al~~A~aaaa~~v~~~Ga~~~t~~el 350 (352)
T 4e84_A 302 SGAGDTVIATVATMLGAGVPLVDAVVLANRAAGIVVGKLGTATVDYDEL 350 (352)
T ss_dssp TTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSCCCCHHHH
T ss_pred ccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCCCccCCHHHh
Confidence 9999999999999999999999999999999999999999988887665
No 33
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=2.1e-41 Score=293.22 Aligned_cols=260 Identities=24% Similarity=0.351 Sum_probs=214.9
Q ss_pred hhcCCCceeecCChhHHHHHHHHHhhcCCCc-EEEEEeecCCchhHHHHHHHHhcCCceeEEe-cCCCCceeEEEEEe-C
Q 022475 5 LASKENVEYIAGGATQNSIKVAQWMLQIPGA-TSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-G 81 (296)
Q Consensus 5 ~~~~~~~~~~~GG~~~n~a~~~~~l~~lg~~-v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~ 81 (296)
..+..+....+||++.|+|+++++ ++ .+ +.++|.+|+|.+|+.+++.|+++|| ++. .++.+|+.+++.++ +
T Consensus 40 ~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~~i~~vG~D~~G~~l~~~L~~~gV---~v~~~~~~~T~~~~~~~~~~ 113 (311)
T 1vm7_A 40 TQKAIEMNVFPGGKGANQAVTVAK-IG--EKGCRFVTCIGNDDYSDLLIENYEKLGI---TGYIRVSLPTGRAFIEVDKT 113 (311)
T ss_dssp EEECSEEEEEEECHHHHHHHHHHH-HH--SSCEEEEEEECSSHHHHHHHHHHHHTTE---EEEEECSSCCCEEEEEECTT
T ss_pred eEecCeeeecCCCHHHHHHHHHHH-cC--CCceEEEEEECCChHHHHHHHHHHHCCC---EEEEcCCCCCeEEEEEECCC
Confidence 344556778899999999999998 34 89 9999999999999999999999999 554 46789999999988 6
Q ss_pred CeeceeeccccccccCccccCChhhhhhhhcceEEEEeccccccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHH
Q 022475 82 GERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQ 161 (296)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 161 (296)
|+++++.+.+++..++++++. .+.+.+++++++++. .+.+.+. +.+++.++++++|+... .+..
T Consensus 114 g~~~~~~~~ga~~~l~~~~~~----~~~~~~~~~v~~~~~---~~~~~~~---~~a~~~~~~v~~Dp~~~------~~~~ 177 (311)
T 1vm7_A 114 GQNRIIIFPGANAELKKELID----WNTLSESDILLLQNE---IPFETTL---ECAKRFNGIVIFDPAPA------QGIN 177 (311)
T ss_dssp SCEEEEEECGGGGGCCGGGCC----HHHHTTCSEEEECSS---SCHHHHH---HHHHHCCSEEEECCCSC------TTCC
T ss_pred CCEEEEEecCccccCCHHHhC----hhhcccCCEEEEeCC---CCHHHHH---HHHHHcCCEEEEeCcch------hhhh
Confidence 889888777777778777665 245788999999852 3344433 33778899999999642 1224
Q ss_pred HhhcCCCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecccCCCc
Q 022475 162 EKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKE 241 (296)
Q Consensus 162 ~~~l~~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~ 241 (296)
..+++++|++++|++|++.|++....+.+++.++++.+. +.|++.+++|+|++|++++++++.+++|++++
T Consensus 178 ~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~------~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v--- 248 (311)
T 1vm7_A 178 EEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEKAAEKFL------ELGVKNVIVKLGDKGVLLVNKNEKKHFPTFKV--- 248 (311)
T ss_dssp GGGGGGCSEECCBHHHHHHHHHHHHSCCCCHHHHHHHHH------HTTCSEEEEECGGGCEEEEETTEEEEECCCCC---
T ss_pred HHHHhhCCEEeCCHHHHHHHhCCCCCChhHHHHHHHHHH------HcCCCEEEEEECCCCeEEEeCCceEEecCCCc---
Confidence 467899999999999999998764444567888888884 45789999999999999999888888887654
Q ss_pred cccCCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccC--CCCCCCCC
Q 022475 242 KLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGC--TYPPKPEF 295 (296)
Q Consensus 242 ~vvd~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~--~~~~~~~~ 295 (296)
+++|||||||+|+|||+++|++|+++++|+++|+++|+.++++.|+ .+|+++++
T Consensus 249 ~~vdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev 304 (311)
T 1vm7_A 249 KAVDTTAAGDVFNGAFAVALSEGKNPEEAVIFGTAAAAISVTRLGAQSSIPAREEV 304 (311)
T ss_dssp CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSSSGGGCCCHHHH
T ss_pred ccCCCCccHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHhCcCCccccCCCHHHH
Confidence 7999999999999999999999999999999999999999999998 36776553
No 34
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=100.00 E-value=1.9e-41 Score=292.57 Aligned_cols=255 Identities=19% Similarity=0.266 Sum_probs=211.4
Q ss_pred cCCCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEe-cCCCCceeEEEEEe-CCee
Q 022475 7 SKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGER 84 (296)
Q Consensus 7 ~~~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~~~~ 84 (296)
+..+....+||++.|+|+++++ +|.++.++|.+|+|.+|+.+++.|+++||+++++. .++.+|+.++++++ +|++
T Consensus 33 ~~~~~~~~~GG~~~N~A~~la~---LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~~~~~~~~~T~~~~~~~~~~g~~ 109 (302)
T 2c4e_A 33 QIPSARKYYGGAAANTAVGIKK---LGVNSELLSCVGYDFKNSGYERYLKNLDINISKLYYSEEEETPKAWIFTDKDNNQ 109 (302)
T ss_dssp CCSCEEEEEECHHHHHHHHHHH---TTCEEEEECEECTTTTTSHHHHHHHHTTCBCTTCEECSSSCCCEEEEEECSSCCE
T ss_pred eecceeecCCCHHHHHHHHHHH---CCCceEEEEEEeCCCchHHHHHHHHHcCCcccceEeeCCCCCceEEEEECCCCCE
Confidence 3445778999999999999998 45999999999999999999999999999998874 56778999999987 7888
Q ss_pred ceeeccccccccCccccCChhhhhhhhcceEEEEeccccccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhh
Q 022475 85 SLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKA 164 (296)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 164 (296)
+++.+.+++..++++++.. .++|++|+++. .++.+..+++.+++.+ ++++|+.... .....+.++++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~----~~~~~~~~~~~a~~~g-~v~~D~~~~~-~~~~~~~~~~~ 176 (302)
T 2c4e_A 110 ITFFLWGAAKHYKELNPPN-------FNTEIVHIATG----DPEFNLKCAKKAYGNN-LVSFDPGQDL-PQYSKEMLLEI 176 (302)
T ss_dssp ECCEECGGGGGGGGCCCCC-------CCEEEEEECSS----CHHHHHHHHHHHBTTB-EEEECCGGGG-GGCCHHHHHHH
T ss_pred EEEEeCChhhhCCHhhcCc-------ccCCEEEEeCC----CcHHHHHHHHHHHhcC-CEEEeCchhh-hhhhHHHHHHH
Confidence 8877777766677666542 67999999852 3488888999999999 9999996322 11124567788
Q ss_pred cCCCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecccCCCcc-c
Q 022475 165 LPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEK-L 243 (296)
Q Consensus 165 l~~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~-v 243 (296)
++++|++++|++|++.+++.... +.. .+. .. ++.+++|+|++|++++++++.+++|++++ + +
T Consensus 177 l~~~dil~~N~~E~~~l~g~~~~---~~~----~l~------~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~~ 239 (302)
T 2c4e_A 177 IEHTNFLFMNKHEFERASNLLNF---EID----DYL------ER-VDALIVTKGSKGSVIYTKDKKIEIPCIKA---GKV 239 (302)
T ss_dssp HHTCSEEEEEHHHHHHHHHHHTC---CHH----HHH------TT-CSEEEEECGGGCEEEECSSCEEEECCCCC---SCC
T ss_pred HhcCCEEEcCHHHHHHHhCCCCc---cHH----HHH------hc-CCEEEEEECCCceEEEeCCcEEEeCCccC---CcC
Confidence 99999999999999999875422 211 442 34 78999999999999998888888887655 6 9
Q ss_pred cCCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccC--CCCCCCC
Q 022475 244 VDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGC--TYPPKPE 294 (296)
Q Consensus 244 vd~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~--~~~~~~~ 294 (296)
+|||||||+|+|||+++|++|+++++|+++|+++|+.++++.|+ ..|++++
T Consensus 240 vdt~GAGDaf~a~~~~~l~~g~~~~~a~~~a~~~aa~~~~~~G~~~~~p~~~e 292 (302)
T 2c4e_A 240 IDPTGAGDSYRAGFLSAYVKGYDLEKCGLIGAATASFVVEAKGCQTNLPTWDK 292 (302)
T ss_dssp SCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSSSSTTCCCHHH
T ss_pred CcCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHccccccccCCCHHH
Confidence 99999999999999999999999999999999999999999998 3576554
No 35
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=100.00 E-value=4.1e-41 Score=291.87 Aligned_cols=261 Identities=22% Similarity=0.256 Sum_probs=215.2
Q ss_pred hhcCCCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEe-cCCCCceeEEEEEeCCe
Q 022475 5 LASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVVGGE 83 (296)
Q Consensus 5 ~~~~~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~~~~ 83 (296)
+.+.......+||++.|+|+++++ +|.++.++|.+|+|.+|+.+++.|+++||+++++. .++.+|+.+++.+++++
T Consensus 22 ~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~ig~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~g~ 98 (313)
T 3ewm_A 22 LKDVRLFEKHPGGAPANVAVGVSR---LGVKSSLISKVGNDPFGEYLIEELSKENVDTRGIVKDEKKHTGIVFVQLKGAS 98 (313)
T ss_dssp TTTCCEEEEEEECHHHHHHHHHHH---TTCEEEEEEEEESSHHHHHHHHHHHHTTCBCTTEEEESSSCCEEEEEECSSSS
T ss_pred cccccceeecCCCHHHHHHHHHHH---CCCCeEEEEEeCCCHHHHHHHHHHHHcCCCccceeecCCCCceEEEEEecCCC
Confidence 445567788999999999999997 45999999999999999999999999999999885 67789999998877788
Q ss_pred eceeeccc-cccccCccccCChhhhhhhhcceEEEEeccccc--cChHHHHHHHHHHhhCCCEEEEeCCch--hhh---h
Q 022475 84 RSLVANLS-AANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLT--VSPESIQMVAEHAAAKNKVFMMNLSAP--FIC---E 155 (296)
Q Consensus 84 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~---~ 155 (296)
++++.+.+ +...++++++.. +.+.+++++|++++.+. .+.+.+..+++.++ .++++++|+... .|. .
T Consensus 99 ~~~~~~~~~a~~~l~~~~~~~----~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~-~~~~v~~Dp~~~~~~~~~~~~ 173 (313)
T 3ewm_A 99 PSFLLYDDVAYFNMTLNDINW----DIVEEAKIVNFGSVILARNPSRETVMKVIKKIK-GSSLIAFDVNLRLDLWRGQEE 173 (313)
T ss_dssp CEEEECCSSGGGCCCGGGCCH----HHHHHCSEEEEESGGGGSTTHHHHHHHHHHHHB-TTBEEEEECCCCGGGGTTCHH
T ss_pred cceEeeccCHHHhCChhhCCH----HHhCCCCEEEEcCcccCCcchHHHHHHHHHHhc-cCCEEEEeCCCChHHcCCCHH
Confidence 88877655 445677777653 45788999999997643 34477888888887 578899998532 332 2
Q ss_pred hhhHHHHhhcCCCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEec
Q 022475 156 FFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPV 235 (296)
Q Consensus 156 ~~~~~~~~~l~~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~ 235 (296)
...+.++++++++|++++|++|++.+.+.. . ...+...+|+|+|++|++++++++.+++|+
T Consensus 174 ~~~~~~~~~l~~~di~~~N~~E~~~l~~~~-------------~------~~~~~~~vviT~G~~G~~~~~~~~~~~~~~ 234 (313)
T 3ewm_A 174 EMIKVLEESIKLADIVKASEEEVLYLENQG-------------V------EVKGSMLTAITLGPKGCRLIKNETVVDVPS 234 (313)
T ss_dssp HHHHHHHHHHHHCSEEEEEHHHHHHHHTTT-------------C------CCCCSSEEEEECGGGEEEEEETTEEEEEEC
T ss_pred HHHHHHHHHHhhCCEEecCHHHHHHHhccC-------------c------cccCceEEEEEECCCCeEEEECCeeEEcCC
Confidence 234667888999999999999999887421 0 122345689999999999999999999988
Q ss_pred ccCCCccccCCCCCchhhhHHHHHHHh--cCCCHHHHHHHhhHHhhhhhhhccC-CCCCCCCC
Q 022475 236 ILLPKEKLVDTNGAGDAFVGGFLSQLV--QEKPVEDCVRTGCYAANVVIQRSGC-TYPPKPEF 295 (296)
Q Consensus 236 ~~~~~~~vvd~tGaGDaf~ag~~~~l~--~~~~~~~a~~~A~~~aa~~~~~~G~-~~~~~~~~ 295 (296)
+++ +++|||||||+|+|||+++|+ +|+++++|+++|+++|+.++++.|+ ..|+++|+
T Consensus 235 ~~v---~vvDttGAGDaf~a~~~~~l~~~~g~~l~~a~~~A~~~aa~~v~~~G~~~~p~~~ev 294 (313)
T 3ewm_A 235 YNV---NPLDTTGAGDAFMAALLVGILKLKGLDLLKLGKFANLVAALSTQKRGAWSTPRKDEL 294 (313)
T ss_dssp CCC---CCSCCTTHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHTTSCSSCCCCCHHHH
T ss_pred CCc---ccCCCCCchHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHccCCCCCCCCHHHH
Confidence 765 799999999999999999999 9999999999999999999999998 56776654
No 36
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=100.00 E-value=8e-42 Score=295.62 Aligned_cols=246 Identities=21% Similarity=0.236 Sum_probs=212.1
Q ss_pred hcCCCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEecCCCCceeEEEEEe-CCee
Q 022475 6 ASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV-GGER 84 (296)
Q Consensus 6 ~~~~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~~~~ 84 (296)
.+..+.+..+||++.|+|+++++ +|.++.++|.+|+|.+|+.+++.|+++||++++++..+.+|+.+++.++ +|+|
T Consensus 46 ~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~i~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~T~~~~~~~~~~g~~ 122 (310)
T 3go6_A 46 VLAASLTRTPGGKGANQAVAAAR---AGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAEN 122 (310)
T ss_dssp CCCSEEEEEEECHHHHHHHHHHH---TTCEEEEECEECSSHHHHHHHHHHHHTTCBCTTCEECSSCCEEEEEEECTTSCE
T ss_pred EEecceeecCCCHHHHHHHHHHH---CCCCeEEEEEECCCHHHHHHHHHHHHcCCccceeEecCCCCCEEEEEEcCCCCE
Confidence 34456788999999999999997 4599999999999999999999999999999998766779999999998 7899
Q ss_pred ceeeccccccccCccccCChhhhhhhhcceEEEEeccccccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhh
Q 022475 85 SLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKA 164 (296)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 164 (296)
+++.+.+++..++ ++ .+.+.++|++|+++ ..+.+.+..+++.+++.+.++++|+....+ ..+.++.+
T Consensus 123 ~~~~~~ga~~~l~--~~-----~~~l~~~~~v~~~~---~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~---~~~~~~~l 189 (310)
T 3go6_A 123 TVLVAPGANAHLT--PV-----PSAVANCDVLLTQL---EIPVATALAAARAAQSADAVVMVNASPAGQ---DRSSLQDL 189 (310)
T ss_dssp EEEEECGGGGGCC--CC-----TTTTTTCSEEEECS---SSCHHHHHHHHHHHHHTTCEEEEECCSSSC---CHHHHHHH
T ss_pred EEEecCChhhhHH--HH-----HHHhhcCCEEEECC---CCCHHHHHHHHHHHHHcCCEEEEcCCcccc---chHHHHHH
Confidence 8888777766665 23 24678999999986 456788899999999999999999974432 34567788
Q ss_pred cCCCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecccCCCcccc
Q 022475 165 LPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLV 244 (296)
Q Consensus 165 l~~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vv 244 (296)
++++|++++|++|++.|++. ++.+|+|+|++|++++++++.+++|++++ +++
T Consensus 190 l~~~dil~~N~~Ea~~l~g~-------------------------~~~vvvt~G~~Ga~~~~~~~~~~~~~~~v---~vv 241 (310)
T 3go6_A 190 AAIADVVIANEHEANDWPSP-------------------------PTHFVITLGVRGARYVGADGVFEVPAPTV---TPV 241 (310)
T ss_dssp HHHCSEEEEEHHHHHHSSSC-------------------------CSEEEEECGGGCEEEEETTEEEEECCCCC---CCS
T ss_pred HhhCCEEEeCHHHHHHHhCC-------------------------CCEEEEEECCCCEEEEECCceEEeCCCCC---CcC
Confidence 99999999999999876530 36899999999999999999999988765 799
Q ss_pred CCCCCchhhhHHHHHHHhc----CCCHHHHHHHhhHHhhhhhhhccC--CCCCCCCC
Q 022475 245 DTNGAGDAFVGGFLSQLVQ----EKPVEDCVRTGCYAANVVIQRSGC--TYPPKPEF 295 (296)
Q Consensus 245 d~tGaGDaf~ag~~~~l~~----~~~~~~a~~~A~~~aa~~~~~~G~--~~~~~~~~ 295 (296)
|||||||+|+|||+++|++ |+++++|+++|+++|+.++++.|+ .+|+++|+
T Consensus 242 dttGAGDaF~ag~~~~l~~~~~~g~~l~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev 298 (310)
T 3go6_A 242 DTAGAGDVFAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAI 298 (310)
T ss_dssp CCTTHHHHHHHHHHHHCCSSSCCHHHHHHHHHHHHHHHHHHTTSSCSTTCCCCHHHH
T ss_pred cCCCchHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCCHHHH
Confidence 9999999999999999999 999999999999999999999999 56877654
No 37
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=2.6e-41 Score=297.64 Aligned_cols=275 Identities=16% Similarity=0.171 Sum_probs=216.3
Q ss_pred hhcCCCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEecCCCCceeEEEEEeCCee
Q 022475 5 LASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGER 84 (296)
Q Consensus 5 ~~~~~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~~~~ 84 (296)
+.+..+....+||++.|+|+++++ +|.++.++|.+|+|.+|+.+++.|+++||+++++...+.+|+.+++..++++|
T Consensus 33 ~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~i~~vG~D~~G~~i~~~L~~~gv~~~~v~~~~~~t~~~~v~~~~~~r 109 (351)
T 2afb_A 33 IFQTDSFDVTYGGAEANVAAFLAQ---MGLDAYFVTKLPNNPLGDAAAGHLRKFGVKTDYIARGGNRIGIYFLEIGASQR 109 (351)
T ss_dssp GGGCSEEEEEEECHHHHHHHHHHH---TTSEEEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCEEEEECCBTTB
T ss_pred ccccceeeEecCChHHHHHHHHHH---cCCCeEEEEEeCCCHHHHHHHHHHHHcCCcceeEEECCCcceEEEEEecCCCC
Confidence 344567788999999999999997 45999999999999999999999999999999986566788888877765555
Q ss_pred -ceeeccc---cccccCccccCChhhhhhhhcceEEEEeccccccCh---HHHHHHHHHHhhCCCEEEEeCCc--hhhhh
Q 022475 85 -SLVANLS---AANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSP---ESIQMVAEHAAAKNKVFMMNLSA--PFICE 155 (296)
Q Consensus 85 -~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~---~~~~~~~~~~~~~~~~~~~d~~~--~~~~~ 155 (296)
+++.+.. +...++++++.. ...+.++|++|++++.+..++ +.+..+++.+++.++++++|+.. ..|..
T Consensus 110 ~~~v~~~~~~~a~~~~~~~~~~~---~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~ 186 (351)
T 2afb_A 110 PSKVVYDRAHSAISEAKREDFDW---EKILDGARWFHFSGITPPLGKELPLILEDALKVANEKGVTVSCDLNYRARLWTK 186 (351)
T ss_dssp CCEEEEECTTCTTTTCCGGGCCH---HHHTTTEEEEEEETTSGGGSTTHHHHHHHHHHHHHHHTCEEEEECCCCTTTCCH
T ss_pred cceEEEeCCCChhhhCChhhCCH---HHhhcCCCEEEEeCcccccChhHHHHHHHHHHHHHHcCCEEEEeCCCchhcCCh
Confidence 3443322 223455555542 234688999999987654443 67788899999999999999863 23321
Q ss_pred -hhhHHHHhhcCCCcEEEcCHHHHHHHHHHcCC---------CCCCHHHHHHHHhcCCCCCC-CCceEEEEeeCCCcE--
Q 022475 156 -FFREPQEKALPYMDYVFGNETEARTFAKVHGW---------ETDNVEEIALKISQWPKASG-THKRITVITQGADPV-- 222 (296)
Q Consensus 156 -~~~~~~~~~l~~~dv~~~n~~E~~~l~~~~~~---------~~~~~~~~~~~l~~~~~~~~-~g~~~vvvt~G~~G~-- 222 (296)
...+.+.++++++|++++|.+|++.|++.... +.+++.++++.+. . .|++.|++|+|++|+
T Consensus 187 ~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~l~------~~~g~~~vvvT~G~~G~~~ 260 (351)
T 2afb_A 187 EEAQKVMIPFMEYVDVLIANEEDIEKVLGISVEGLDLKTGKLNREAYAKIAEEVT------RKYNFKTVGITLRESISAT 260 (351)
T ss_dssp HHHHHHHHHHGGGCSEEEECHHHHHHHHCCCCSCC-------CHHHHHHHHHHHH------HHHCCSEEEEEEEECSCSS
T ss_pred HHHHHHHHHHHhhCCEEEecHHHHHHHhCCCcccccccccccchhhHHHHHHHHH------HHcCCCEEEEEeCCcCccc
Confidence 23466788999999999999999999864321 1223556666663 3 378899999999975
Q ss_pred ------EEEECCeEEEEecccCCCccccCCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccC-CCCCCCC
Q 022475 223 ------VVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGC-TYPPKPE 294 (296)
Q Consensus 223 ------~~~~~~~~~~~~~~~~~~~~vvd~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~-~~~~~~~ 294 (296)
+++++++.+++|++++ +++|||||||+|+|||+++|++|+++++|+++|+++|+.++++.|+ ..|++++
T Consensus 261 ~~~~g~~~~~~~~~~~~~~~~v---~vvdttGAGDaF~ag~~~~l~~g~~l~~a~~~A~~~aa~~v~~~G~~~~~~~~e 336 (351)
T 2afb_A 261 VNYWSVMVFENGQPHFSNRYEI---HIVDRVGAGDSFAGALIYGSLMGFDSQKKAEFAAAASCLKHTIPGDFVVLSIEE 336 (351)
T ss_dssp EEEEEEEEEETTEEEECCCEEE---ECSCCTTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTSSSSSCCCCHHH
T ss_pred cccceeEEEeCCcEEEcCCCCC---ccCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 6778888888887665 7999999999999999999999999999999999999999999998 5666554
No 38
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=100.00 E-value=5.4e-42 Score=300.35 Aligned_cols=263 Identities=19% Similarity=0.301 Sum_probs=208.9
Q ss_pred CCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEe-cCCCCceeEEEEEe-CCeece
Q 022475 9 ENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSL 86 (296)
Q Consensus 9 ~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~~~~~~ 86 (296)
......+||++.|+|+++++ +|.++.++|.+|+|.+|+.+++.|+++||+++++. .++.+|+.+++.++ +|+|++
T Consensus 43 ~~~~~~~GG~~~NvA~~la~---LG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~r~~ 119 (339)
T 1tyy_A 43 NSYLKCPGGASANVGVCVAR---LGGECGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAVLIVNLTADGERSF 119 (339)
T ss_dssp SEEEEEEECHHHHHHHHHHH---TTCCEEEEEEECSSHHHHHHHHHHHTTTEECTTEEECTTSCCCEEEEC-------CE
T ss_pred CceEEcCCCHHHHHHHHHHH---cCCCeEEEEeeCCCHHHHHHHHHHHHcCCCchheEecCCCCCeEEEEEEcCCCCeEE
Confidence 45567899999999999998 45999999999999999999999999999999985 56778999998877 688876
Q ss_pred eecc--ccccccCccccCChhhhhhhhcceEEEEecccc--ccChHHHHHHHHHHhhCCCEEEEeCCc--hhhh--hhhh
Q 022475 87 VANL--SAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFL--TVSPESIQMVAEHAAAKNKVFMMNLSA--PFIC--EFFR 158 (296)
Q Consensus 87 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~--~~~~ 158 (296)
..+. +++..++++.. +.+.++|++|++++.+ ..+.+.+..+++.+++.++++++|+.. ..|. ....
T Consensus 120 ~~~~~~~a~~~l~~~~~------~~l~~~~~v~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~ 193 (339)
T 1tyy_A 120 TYLVHPGADTYVSPQDL------PPFRQYEWFYFSSIGLTDRPAREACLEGARRMREAGGYVLFDVNLRSKMWGNTDEIP 193 (339)
T ss_dssp EECCSSCGGGGCCGGGC------CCCCTTCEEEEEHHHHSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCGGGHH
T ss_pred EEecCCChhhhCCcchh------hHhccCCEEEEcchhhcCcccHHHHHHHHHHHHHcCCEEEEeCCCCccccCCHHHHH
Confidence 5543 44444544422 3467899999998753 223467788999999999999999853 2232 2245
Q ss_pred HHHHhhcCCCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecccC
Q 022475 159 EPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILL 238 (296)
Q Consensus 159 ~~~~~~l~~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~ 238 (296)
+.++++++++|++++|++|++.|++ .++++++++.+ ...|++.||+|+|++|++++++++.+++|++++
T Consensus 194 ~~~~~ll~~~dil~~N~~Ea~~l~g-----~~~~~~~~~~l------~~~g~~~VvvT~G~~G~~~~~~~~~~~~~~~~v 262 (339)
T 1tyy_A 194 ELIARSAALASICKVSADELCQLSG-----ASHWQDARYYL------RDLGCDTTIISLGADGALLITAEGEFHFPAPRV 262 (339)
T ss_dssp HHHHHHHHHCSEEEEEHHHHHHHHC-----CSSGGGGSSTT------GGGTCSCEEEECGGGCEEEESSSCEEEECCCCC
T ss_pred HHHHHHHhhCCEEecCHHHHHHHhC-----CCCHHHHHHHH------HHcCCCEEEEEECCCceEEEeCCceEEcCCCCC
Confidence 5677888999999999999999986 33555555555 356788999999999999998888888887654
Q ss_pred CCccccCCCCCchhhhHHHHHHHhcC-----CCHHHHHHHhhHHhhhhhhhccC--CCCCCCC
Q 022475 239 PKEKLVDTNGAGDAFVGGFLSQLVQE-----KPVEDCVRTGCYAANVVIQRSGC--TYPPKPE 294 (296)
Q Consensus 239 ~~~~vvd~tGaGDaf~ag~~~~l~~~-----~~~~~a~~~A~~~aa~~~~~~G~--~~~~~~~ 294 (296)
+++|||||||+|+|||+++|++| +++++|+++|+++|+.++++.|+ ..|++++
T Consensus 263 ---~vvDttGAGDaF~ag~~~~l~~g~~~~~~~l~~a~~~A~a~aa~~v~~~G~~~~~p~~~e 322 (339)
T 1tyy_A 263 ---DVVDTTGAGDAFVGGLLFTLSRANCWDHALLAEAISNANACGAMAVTAKGAMTALPFPDQ 322 (339)
T ss_dssp ---CCSCCTTHHHHHHHHHHHHHTTSSSCCHHHHHHHHHHHHHHHHHGGGSSSTTTTCCCHHH
T ss_pred ---CcCCCCCchHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHHhCCCCCCCCCCCHHH
Confidence 79999999999999999999997 89999999999999999999998 4576554
No 39
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=100.00 E-value=6.4e-41 Score=291.82 Aligned_cols=267 Identities=15% Similarity=0.146 Sum_probs=209.5
Q ss_pred hhhcCCCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEecCCCCceeEEEEEeCCe
Q 022475 4 ELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGE 83 (296)
Q Consensus 4 ~~~~~~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~~~ 83 (296)
+..+..+....+||++.|+|+++++ + |.++.++|.+|+ .+|+.+++.|+++||+++++...+ .|+.++.+++.++
T Consensus 26 ~~~~~~~~~~~~GG~~~NvA~~la~-L--G~~~~~~~~vG~-~~G~~i~~~L~~~gV~~~~v~~~~-~t~~~~~~~~~~~ 100 (323)
T 2f02_A 26 TVNRTSQVTKTPGGKGLNVTRVIHD-L--GGDVIATGVLGG-FHGAFIANELKKANIPQAFTSIKE-ETRDSIAILHEGN 100 (323)
T ss_dssp SEEEESCEEEEEESHHHHHHHHHHH-H--TCCEEEEEEEEH-HHHHHHHHHHHHTTCCBCCEEESS-CCEEEEEEEETTE
T ss_pred CEEEeceEEEcCCcHHHHHHHHHHH-c--CCCeEEEEEecc-chHHHHHHHHHHCCCceeEEEcCC-CCeeEEEEEcCCC
Confidence 3444557888999999999999998 3 499999999997 499999999999999999986543 4777777777445
Q ss_pred eceeeccccccccCccccCC--hhhhhhhhcceEEEEeccccc-cChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHH
Q 022475 84 RSLVANLSAANCYKSEHLKR--PEIWSIVEKAKYYYIAGFFLT-VSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREP 160 (296)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 160 (296)
++++...++ .++++++.. ....+.+.++|++|++|+... .+.+.+..+++.+++.++++++|+....
T Consensus 101 ~~~~~~~g~--~l~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~-------- 170 (323)
T 2f02_A 101 QTEILEAGP--TVSPEEISNFLENFDQLIKQAEIVTISGSLAKGLPSDFYQELVQKAHAQEVKVLLDTSGDS-------- 170 (323)
T ss_dssp EEEEEECCC--BCCHHHHHHHHHHHHHHHTTCSEEEEESCCCBTSCTTHHHHHHHHHHHTTCEEEEECCTHH--------
T ss_pred eEEEECCCC--CCCHHHHHHHHHHHHHhccCCCEEEEECCCCCCCChHHHHHHHHHHHHCCCEEEEECChHH--------
Confidence 554444332 355544432 111234678999999986642 3457888999999999999999997532
Q ss_pred HHhhc---CCCcEEEcCHHHHHHHHHHcCC-CC-CCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEec
Q 022475 161 QEKAL---PYMDYVFGNETEARTFAKVHGW-ET-DNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPV 235 (296)
Q Consensus 161 ~~~~l---~~~dv~~~n~~E~~~l~~~~~~-~~-~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~ 235 (296)
+.+++ +++|++++|.+|++.|++.... +. +++.++++.+ ...|++.+++|+|++|++++++++.+++|+
T Consensus 171 ~~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~ 244 (323)
T 2f02_A 171 LRQVLQGPWKPYLIKPNLEELEGLLGQDFSENPLAAVQTALTKP------MFAGIEWIVISLGKDGAIAKHHDQFYRVKI 244 (323)
T ss_dssp HHHHHHSSCCCSEECCBHHHHHHHHTCCCCSSCHHHHHHHHTSG------GGTTCSEEEEECGGGCEEEEETTEEEEEEC
T ss_pred HHHHHhccCCCeEEecCHHHHHHHhCCCCCCCcHHHHHHHHHHH------HHcCCCEEEEeecCCceEEEeCCCEEEEcC
Confidence 23334 6899999999999999864321 11 2444555555 456889999999999999999988888887
Q ss_pred ccCCCccccCCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccCCCCCCCC
Q 022475 236 ILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPE 294 (296)
Q Consensus 236 ~~~~~~~vvd~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~~~~~~~~ 294 (296)
+++ +++|||||||+|+|||+++|++|+++++|+++|+++|+.++++.|+..|++++
T Consensus 245 ~~v---~vvdttGAGDaF~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~~~e 300 (323)
T 2f02_A 245 PTI---QAKNPVGSGDATIAGLAYGLAKDAPAAELLKWGMAAGMANAQERMTGHVDVEN 300 (323)
T ss_dssp CCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHSSSSSCCCHHH
T ss_pred CCc---cccCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCCcCCCCHHH
Confidence 655 79999999999999999999999999999999999999999999998787654
No 40
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=100.00 E-value=6.1e-41 Score=289.87 Aligned_cols=263 Identities=17% Similarity=0.202 Sum_probs=208.9
Q ss_pred hhcCCCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEecCCCCceeEEEEEeCCee
Q 022475 5 LASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGER 84 (296)
Q Consensus 5 ~~~~~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~~~~ 84 (296)
..+..+....+||++.|+|+++++ +|.++.++|.+|+ .+|+.+++.|+++||+++++...+ .|+.++.+ ++|++
T Consensus 25 ~~~~~~~~~~~GG~~~N~A~~la~---LG~~~~~~~~vG~-~~g~~i~~~L~~~gv~~~~v~~~~-~t~~~~~~-~~g~~ 98 (306)
T 2abq_A 25 VNRSERDRKQPGGKGINVSRVLKR---LGHETKALGFLGG-FTGAYVRNALEKEEIGLSFIEVEG-DTRINVKI-KGKQE 98 (306)
T ss_dssp EEECSEEEEEEECHHHHHHHHHHH---TTCCCEEEEEEEH-HHHHHHHHHHHHTTCEECCEEESS-CCEEEEEE-ESSSC
T ss_pred eEEeceeEecCCchHHHHHHHHHH---cCCCceEEEEecc-hhHHHHHHHHHHcCCceEEEEcCC-CCceEEEE-eCCce
Confidence 344557788999999999999997 4599999999998 799999999999999999986543 47777666 77777
Q ss_pred ceeeccccccccCccccCC-hhhhhhhhcceEEEEecccc-ccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHH
Q 022475 85 SLVANLSAANCYKSEHLKR-PEIWSIVEKAKYYYIAGFFL-TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQE 162 (296)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~g~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 162 (296)
+++...++ .++++.+.. .+.+..+.++|++|++|+.. ..+.+.+..+++.+++++.++++|+... .+.
T Consensus 99 ~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~--------~~~ 168 (306)
T 2abq_A 99 TELNGTAP--LIKKEHVQALLEQLTELEKGDVLVLAGSVPQAMPQTIYRSMTQIAKERGAFVAVDTSGE--------ALH 168 (306)
T ss_dssp EEEBCCCC--CCCHHHHHHHHHHHTTCCTTCEEEEESCCCTTSCTTHHHHHHHHHHTTTCEEEEECCHH--------HHH
T ss_pred EEEECCCC--CCCHHHHHHHHHHHHhccCCCEEEEecCCCCCCCHHHHHHHHHHHHhcCCEEEEECChH--------HHH
Confidence 65544442 344444332 00111157899999998654 3455788899999999999999999642 256
Q ss_pred hhcC-CCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecccCCCc
Q 022475 163 KALP-YMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKE 241 (296)
Q Consensus 163 ~~l~-~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~ 241 (296)
++++ ++|++++|.+|++.+++....+.+++.++++.+. ..|++.+++|+|++|++++++++.+++|++++
T Consensus 169 ~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~------~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v--- 239 (306)
T 2abq_A 169 EVLAAKPSFIKPNHHELSELVSKPIASIEDAIPHVQRLI------GEGIESILVSFAGDGALFASAEGMFHVNVPSG--- 239 (306)
T ss_dssp HHGGGCCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHHH------HTTCCEEEEECGGGCEEEEETTEEEEECCCCC---
T ss_pred HHHhcCCcEEecCHHHHHHHhCCCCCCHHHHHHHHHHHH------HcCCCEEEEecCCCceEEEeCCCEEEEeCCCc---
Confidence 7888 9999999999999998753322345566777773 45788999999999999999888888887654
Q ss_pred cccCCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccCCCCCCCC
Q 022475 242 KLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPE 294 (296)
Q Consensus 242 ~vvd~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~~~~~~~~ 294 (296)
+++|||||||+|+|||+++|++|+++++|+++|+++|+.++++. ..|++++
T Consensus 240 ~vvdttGAGDaF~a~~~~~l~~g~~~~~a~~~A~a~aa~~v~~~--~~p~~~e 290 (306)
T 2abq_A 240 EVRNSVGAGDSVVAGFLAALQEGKSLEDAVPFAVAAGSATAFSD--GFCTREE 290 (306)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHSS--SCCCHHH
T ss_pred cccCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCc--CCCCHHH
Confidence 79999999999999999999999999999999999999999998 5566544
No 41
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=100.00 E-value=7.4e-41 Score=294.75 Aligned_cols=274 Identities=15% Similarity=0.140 Sum_probs=202.3
Q ss_pred hhcCCCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEecCCCCceeEEEEEe-CCe
Q 022475 5 LASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV-GGE 83 (296)
Q Consensus 5 ~~~~~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~~~ 83 (296)
+.+..+.+..+||++.|+|+++++ ||.++.++|.||+|.+|+.+++.|+++||+++++...+..++.+++... ++.
T Consensus 45 ~~~~~~~~~~~GG~~aNvA~~lar---LG~~~~~ig~vG~D~~G~~l~~~L~~~GVdt~~v~~~~~~~t~~~~~~~~~~~ 121 (351)
T 4gm6_A 45 FSQTTALDIHIGGAEANVAVNLSK---LGHPTRIATVVPANPIGKMAVEHLWRHQVDTAFVVEAGDRLGTYYLESGTALK 121 (351)
T ss_dssp GGGCSEEEEEEECHHHHHHHHHHH---TTCCEEEEEEECSSHHHHHHHHHHHHTTEECTTEEECSSCCCEEEEECCBTTB
T ss_pred ccccCeEEEecCChHHHHHHHHHH---cCCCeEEEEEeCCCHHHHHHHHHHHHcCCCcccccccCCccceeEEEEccCCc
Confidence 345667788999999999999998 5599999999999999999999999999999999655455555554443 444
Q ss_pred eceeeccccc---cccCccccCChhhhhhhhcceEEEEeccccccCh---HHHHHHHHHHhhCCCEEEEeC--Cchhhhh
Q 022475 84 RSLVANLSAA---NCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSP---ESIQMVAEHAAAKNKVFMMNL--SAPFICE 155 (296)
Q Consensus 84 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~---~~~~~~~~~~~~~~~~~~~d~--~~~~~~~ 155 (296)
...+.+.... ....+.++. ..+.+++++++|++|+.+..++ +.+.++++.++++|+++++|+ ++..|..
T Consensus 122 ~~~~~~~~~~~a~~~~~~~d~~---~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~ak~~g~~v~~D~n~r~~lw~~ 198 (351)
T 4gm6_A 122 APSVVYDRQHSSFARHKSMDWD---LSELLKGIRVLHVSGITIALSTFWLEMVVKIIREAKRNGIKISFDMNYRAKLWEL 198 (351)
T ss_dssp CCEEEEECTTCHHHHCCCCCCC---HHHHHTTEEEEEEEHHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCTTTSCH
T ss_pred ceEEEEccccchhhhCCccccC---HHHHHhhcccceecccchhhchhHHHHHHHHHHHHHHcCCCcccCCCcCchhhhh
Confidence 3333332221 123333332 2356789999999998765444 677889999999999988887 4555543
Q ss_pred -hhhHHHHhhcCCCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCC--CcEEEEECCeEEE
Q 022475 156 -FFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGA--DPVVVAEDGKVKL 232 (296)
Q Consensus 156 -~~~~~~~~~l~~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~--~G~~~~~~~~~~~ 232 (296)
..++.++++++++|++++|++|+..+++......+..+...+....+. ...+.+..+++.+. .++.++..++.++
T Consensus 199 ~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 276 (351)
T 4gm6_A 199 EAAKRAYQQLLPLVDYCSAGQMDAVAFFEISSETTDYYQAMHDKYPNIE--LFYATKRTVISASHHLLQGHLWTQGECWE 276 (351)
T ss_dssp HHHHHHHHHHGGGCSEEECCHHHHHHTSCCCTTCSCHHHHHHHHCTTCC--EEEEEEEEEEETTEEEEEEEEEETTEEEE
T ss_pred hhHHHHHHHHHHhCCccccCHHHHHHHhCCCCchhHHHHHHHhhhhhhh--hhhccccceeeeccCCceEEEEeCCceEE
Confidence 356778899999999999999999988644322222233333321110 11233445555554 4677788888888
Q ss_pred EecccCCCccccCCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccCC
Q 022475 233 FPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCT 288 (296)
Q Consensus 233 ~~~~~~~~~~vvd~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~~ 288 (296)
.+++++ .++||||||||+|+|||+++|++|+++++|+++|+++|++++++.|+.
T Consensus 277 ~~~~~~--~~VvDttGAGDaF~ag~l~~l~~g~~~~~al~~A~aaaal~v~~~Ga~ 330 (351)
T 4gm6_A 277 SEEYAI--YPIVDRVGGGDAYTAAVLHGILSEWRPDETVKFATAAAGLKHSIHGDI 330 (351)
T ss_dssp EEEEEE--CSCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSSSS
T ss_pred eCCCCC--CCcCCCCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHhCCCCCC
Confidence 887654 379999999999999999999999999999999999999999999984
No 42
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=2.3e-40 Score=284.99 Aligned_cols=260 Identities=17% Similarity=0.210 Sum_probs=205.4
Q ss_pred eeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEe-cCCCCceeEEEEEe-CCeeceeec
Q 022475 12 EYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVAN 89 (296)
Q Consensus 12 ~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~~~~~~~~~ 89 (296)
...+||++.|+|+++++ +|.++.++|.+|+|.+|+.+++.|+++|| +++. .++.+|+.+++.++ +|+|++...
T Consensus 20 ~~~~GG~~~N~A~~la~---LG~~~~~~~~vG~D~~g~~~~~~l~~~gv--~~v~~~~~~~T~~~~v~~~~~g~~~~~~~ 94 (296)
T 2qhp_A 20 GKKIGGAPANFAYHVSQ---FGFDSRVVSAVGNDELGDEIMEVFKEKQL--KNQIERVDYPTGTVQVTLDDEGVPCYEIK 94 (296)
T ss_dssp EEEEECHHHHHHHHHHH---TTCEEEEEEEEESSHHHHHHHHHHHHTTC--CEEEEEESSCCEEEEEC------CCEEEC
T ss_pred CCCCCCHHHHHHHHHHH---cCCCeeEEEEeCCChHHHHHHHHHHHcCC--CEEeecCCCCceEEEEEECCCCCEEEEEe
Confidence 47899999999999998 45999999999999999999999999999 6664 55778999998887 688776655
Q ss_pred ccc-ccccCccccCChhhhhhhhcceEEEEeccccc--cChHHHHHHHHHHhh-CCCEEEEeCCc--hhhhhhhhHHHHh
Q 022475 90 LSA-ANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLT--VSPESIQMVAEHAAA-KNKVFMMNLSA--PFICEFFREPQEK 163 (296)
Q Consensus 90 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~--~~~~~~~~~~~~~~~-~~~~~~~d~~~--~~~~~~~~~~~~~ 163 (296)
.+. ...+.+. ....+.+.++|++|++++... .+.+.+..+++.+++ .+.++++|+.. +.| ..+.+++
T Consensus 95 ~~~~~~~l~~~----~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~v~~D~~~~~~~~---~~~~~~~ 167 (296)
T 2qhp_A 95 EGVAWDNIPFT----DELKRLALNTRAVCFGSLAQRNEVSRATINRFLDTMPDIDGQLKIFDINLRQDFY---TKEVLRE 167 (296)
T ss_dssp SSCGGGCCCCC----HHHHHHHHTEEEEEECSGGGSSHHHHHHHHHHHHHSCCTTSCEEEEECCCCTTCC---CHHHHHH
T ss_pred cCChhhhCCcc----hhhHhhhcCCCEEEECChHhcChHHHHHHHHHHHHHHhcCCCEEEEECcCCcccc---CHHHHHH
Confidence 432 2233321 123355789999999875432 234677788888876 68899999843 222 1355677
Q ss_pred hcCCCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecccCCCccc
Q 022475 164 ALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKL 243 (296)
Q Consensus 164 ~l~~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~v 243 (296)
+++++|++++|++|++.+++....+.++++++++.+.+ ..|++.+|+|+|++|++++++++.+++|++++ ++
T Consensus 168 ~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~-----~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~ 239 (296)
T 2qhp_A 168 SFKRCNILKINDEELVTISRMFGYPGIDLQDKCWILLA-----KYNLKMLILTCGINGSYVFTPGVVSFQETPKV---PV 239 (296)
T ss_dssp HHHHCSEEEEEHHHHHHHHHHTTCTTSCHHHHHHHHHH-----HTTCSEEEEECGGGCEEEEETTEEEEECCCCC---CC
T ss_pred HHHHCCEEECCHHHHHHHhcccCCCCCCHHHHHHHHHH-----hcCCCEEEEeecCCCeEEEECCeEEEeCCCCC---cc
Confidence 88999999999999999998755445678888888741 23788999999999999999998888887655 79
Q ss_pred cCCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccCCCCC
Q 022475 244 VDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPP 291 (296)
Q Consensus 244 vd~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~~~~~ 291 (296)
+|||||||+|+|||+++|++|+++++|+++|+++|+.++++.|+..+.
T Consensus 240 vdttGAGD~f~a~~~~~l~~g~~~~~a~~~a~~~aa~~v~~~G~~~~~ 287 (296)
T 2qhp_A 240 ADTVGAGDSFTAAFCASILNGKSVPEAHKLAVEVSAYVCTQSGAMPEL 287 (296)
T ss_dssp SCCTTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTSSSSSCCC
T ss_pred ccCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 999999999999999999999999999999999999999999985443
No 43
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=100.00 E-value=1.1e-40 Score=288.36 Aligned_cols=262 Identities=13% Similarity=0.167 Sum_probs=208.4
Q ss_pred hhhcCCCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEecCCCCceeEEEEEeCCe
Q 022475 4 ELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGE 83 (296)
Q Consensus 4 ~~~~~~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~~~ 83 (296)
+..+..+....+||++.|+|+++++ +|.++.++|.+|+ .+|+.+++.|+++||+++++...+ +|+.++.+ .+|+
T Consensus 24 ~~~~~~~~~~~~GG~~~N~A~~la~---LG~~~~~~~~vG~-~~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~-~~g~ 97 (306)
T 2jg5_A 24 GLNRATATYKFAGGKGINVSRVLKT---LDVESTALGFAGG-FPGKFIIDTLNNSAIQSNFIEVDE-DTRINVKL-KTGQ 97 (306)
T ss_dssp SEEECSEEEEEEESHHHHHHHHHHH---TTCCCEEEEEECH-HHHHHHHHHHHHTTCEECCEECSS-CCEEEEEE-ESSS
T ss_pred ceEEeceeEecCCchHHHHHHHHHH---cCCCeeEEEEecC-cchHHHHHHHHHCCCceeEEEcCC-CCeEEEEE-cCCC
Confidence 3445567788999999999999998 4599999999999 599999999999999999986543 47777665 7777
Q ss_pred eceeeccccccccCccccCChhhhhh---hhcceEEEEecccc-ccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhH
Q 022475 84 RSLVANLSAANCYKSEHLKRPEIWSI---VEKAKYYYIAGFFL-TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFRE 159 (296)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~g~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 159 (296)
++++...++ .++++++.. ..+. +.++|++|++|+.. ..+.+.+..+++.+++++.++++|+....
T Consensus 98 ~~~~~~~g~--~~~~~~~~~--~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~------- 166 (306)
T 2jg5_A 98 ETEINAPGP--HITSTQFEQ--LLQQIKNTTSEDIVIVAGSVPSSIPSDAYAQIAQITAQTGAKLVVDAEKEL------- 166 (306)
T ss_dssp EEEEECCCC--CCCHHHHHH--HHHHHTTCCTTCEEEEESCCCTTSCTTHHHHHHHHHHHHCCEEEEECCHHH-------
T ss_pred EEEEECCCC--CCCHHHHHH--HHHHHHhccCCCEEEEeCCCCCCCChHHHHHHHHHHHHCCCEEEEECChHH-------
Confidence 766655443 344444332 1111 56799999998653 23457888899999999999999996432
Q ss_pred HHHhhcC-CCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecccC
Q 022475 160 PQEKALP-YMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILL 238 (296)
Q Consensus 160 ~~~~~l~-~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~ 238 (296)
+.++++ ++|++++|.+|++.+++....+.+++.++++.+. ..|++.+++|+|++|++++++++.+++|++++
T Consensus 167 -~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~------~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v 239 (306)
T 2jg5_A 167 -AESVLPYHPLFIKPNKDELEVMFNTTVNSDADVIKYGRLLV------DKGAQSVIVSLGGDGAIYIDKEISIKAVNPQG 239 (306)
T ss_dssp -HHHHGGGCCSEECCBHHHHHHHTTSCCCSHHHHHHHHHHHH------HTTCSCEEEECGGGCEEEECSSEEEEEECCCC
T ss_pred -HHHHHhcCCeEEecCHHHHHHHhCCCCCCHHHHHHHHHHHH------HcCCCEEEEccCCCceEEEeCCcEEEEeCCcc
Confidence 455666 6999999999999998643222235566777773 46788999999999999998888888887654
Q ss_pred CCccccCCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccCCCCCCCC
Q 022475 239 PKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPE 294 (296)
Q Consensus 239 ~~~~vvd~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~~~~~~~~ 294 (296)
+++|||||||+|+|||+++|++|+++++|+++|+++|+.++++.| .|++++
T Consensus 240 ---~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~a~aa~~v~~~G--~~~~~e 290 (306)
T 2jg5_A 240 ---KVVNTVGSGDSTVAGMVAGIASGLSIEKAFQQAVACGTATAFDED--LATRDA 290 (306)
T ss_dssp ---CCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSS--SCCHHH
T ss_pred ---cccCCcChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCC--CCCHHH
Confidence 799999999999999999999999999999999999999999999 777654
No 44
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=1.7e-41 Score=296.32 Aligned_cols=261 Identities=14% Similarity=0.137 Sum_probs=207.1
Q ss_pred CCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcC--CceeEEecCCCCceeEEEEEe-CCee-
Q 022475 9 ENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAG--VNVKYYEDESAPTGTCAVCVV-GGER- 84 (296)
Q Consensus 9 ~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~g--i~~~~~~~~~~~t~~~~~~~~-~~~~- 84 (296)
.+....+||++.|+|+++++ +|.++.++|.+|+| +|+.+++.|+++| |+++++...+ .|+.++++++ +|++
T Consensus 44 ~~~~~~~GG~~~NvA~~la~---LG~~~~~~~~vG~d-~G~~i~~~L~~~g~~V~~~~v~~~~-~t~~~~~~v~~~g~~~ 118 (331)
T 2ajr_A 44 SKTQMSPGGKGINVSIALSK---LGVPSVATGFVGGY-MGKILVEELRKISKLITTNFVYVEG-ETRENIEIIDEKNKTI 118 (331)
T ss_dssp GGEEEEEESHHHHHHHHHHH---TTCCEEEEEEEEHH-HHHHHHHHHHHHCTTEEEEEEEESS-CCEEEEEEEETTTTEE
T ss_pred cceEEecCcHHHHHHHHHHH---cCCCeEEEEEecCc-hHHHHHHHHHHcCCccceEEEEcCC-CCeEEEEEEeCCCceE
Confidence 67788999999999999997 45999999999998 9999999999999 9999986544 4777777777 6777
Q ss_pred ceeeccccccccCccccCC--hhhhhhhhcceEEEEecccc-ccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHH
Q 022475 85 SLVANLSAANCYKSEHLKR--PEIWSIVEKAKYYYIAGFFL-TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQ 161 (296)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~g~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 161 (296)
+.+...++ .++++.+.. ....+.+.++|++|++|+.. ..+.+.+..+++.+++.++++++|+.... +
T Consensus 119 ~~~~~~g~--~l~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~--------~ 188 (331)
T 2ajr_A 119 TAINFPGP--DVTDMDVNHFLRRYKMTLSKVDCVVISGSIPPGVNEGICNELVRLARERGVFVFVEQTPRL--------L 188 (331)
T ss_dssp EEEECCCC--CCCHHHHHHHHHHHHHHHTTCSEEEEESCCCTTSCTTHHHHHHHHHHHTTCEEEEECCHHH--------H
T ss_pred EEEeCCCC--CCCHHHHHHHHHHHHHhcccCCEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECChHH--------H
Confidence 55544443 344444332 01123467899999998653 33457888999999999999999996432 3
Q ss_pred Hhhc---CCCcEEEcCHHH-HHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEe-cc
Q 022475 162 EKAL---PYMDYVFGNETE-ARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFP-VI 236 (296)
Q Consensus 162 ~~~l---~~~dv~~~n~~E-~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~-~~ 236 (296)
.+++ +++|++++|++| ++.+++....+.+++.++++.+. .. ++.+++|+|++|++++++++.+++| ++
T Consensus 189 ~~~l~~~~~~dil~~N~~E~~~~l~g~~~~~~~~~~~~~~~l~------~~-~~~vvvT~G~~Ga~~~~~~~~~~~~~~~ 261 (331)
T 2ajr_A 189 ERIYEGPEFPNVVKPDLRGNHASFLGVDLKTFDDYVKLAEKLA------EK-SQVSVVSYEVKNDIVATREGVWLIRSKE 261 (331)
T ss_dssp HHHHHSSCCCSEECCCCTTCCSCBTTBCCCSHHHHHHHHHHHH------HH-SSEEEEEETTTEEEEECSSCEEEEEESS
T ss_pred HHHHhcCCCCeEEEeCccchHHHHhCCCCCCHHHHHHHHHHHH------Hh-cCEEEEeecCCceEEEeCCcEEEEecCC
Confidence 3344 359999999999 98887643222235556777764 33 6889999999999999888888888 66
Q ss_pred cCCCccccCCCCCchhhhHHHHHHHh-cCCCHHHHHHHhhHHhhhhhhhccCCCCCCCC
Q 022475 237 LLPKEKLVDTNGAGDAFVGGFLSQLV-QEKPVEDCVRTGCYAANVVIQRSGCTYPPKPE 294 (296)
Q Consensus 237 ~~~~~~vvd~tGaGDaf~ag~~~~l~-~~~~~~~a~~~A~~~aa~~~~~~G~~~~~~~~ 294 (296)
++ +++|||||||+|+|||+++|+ +|+++++|+++|+++|+.++++.|+..|++++
T Consensus 262 ~v---~vvDttGAGDaF~ag~l~~l~~~g~~~~~al~~A~a~aa~~v~~~G~~~~~~~e 317 (331)
T 2ajr_A 262 EI---DTSHLLGAGDAYVAGMVYYFIKHGANFLEMAKFGFASALAATRRKEKYMPDLEA 317 (331)
T ss_dssp CC---CGGGCTTHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTSSSCCCCCHHH
T ss_pred cc---cccCCCchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCcCcCCCCHHH
Confidence 54 799999999999999999999 99999999999999999999999998787654
No 45
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=100.00 E-value=1.2e-39 Score=282.53 Aligned_cols=250 Identities=18% Similarity=0.244 Sum_probs=202.9
Q ss_pred CCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEe-cCCCCceeEEEEEe--CCeec
Q 022475 9 ENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV--GGERS 85 (296)
Q Consensus 9 ~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~--~~~~~ 85 (296)
.+....+||++.|+|+++++ + |.++.++|.+|+|.+|+.+++.|+++||+++++. .++.+|+.++++++ +|+|+
T Consensus 47 ~~~~~~~GG~~~NvA~~la~-L--G~~v~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~~~v~~~~g~r~ 123 (312)
T 2hlz_A 47 LSQRWQRGGNASNSCTILSL-L--GAPCAFMGSMAPGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRT 123 (312)
T ss_dssp SEEEEEEESHHHHHHHHHHH-H--TCCEEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCEEEEEEETTTCCEE
T ss_pred ccceeccCccHHHHHHHHHH-c--CCceEEEEEecCchHHHHHHHHHHHcCCCCccceeccCCCCCeEEEEEECCCCceE
Confidence 34567899999999999998 3 4999999999999999999999999999999885 44667888777765 58888
Q ss_pred eeeccccccccCccccCChhhhhhhhcceEEEEeccccccChHHHHHHHHHHhhC--------CCEEEEeCCchhhhhhh
Q 022475 86 LVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAK--------NKVFMMNLSAPFICEFF 157 (296)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~~~ 157 (296)
++.+.++...++++++.. ..+.++|++|++++ .++....+++.+++. ++++++|+...
T Consensus 124 ~~~~~~~~~~~~~~~~~~----~~l~~~~~v~~~~~----~~~~~~~~~~~a~~~~~~~~~~~~~~v~~d~~~~------ 189 (312)
T 2hlz_A 124 ILYYDRSLPDVSATDFEK----VDLTQFKWIHIEGR----NASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKP------ 189 (312)
T ss_dssp EEEECCCCCCCCHHHHHT----SCGGGEEEEEEECS----SHHHHHHHHHHHHHHHTTSCGGGCCEEEEEECSC------
T ss_pred EEecCCccccCCHHHhhH----hhhccCCEEEEecc----CHHHHHHHHHHHHHhcccccCCCCeEEEEEcccc------
Confidence 877766666666665543 24678999999975 356667777777766 67899998542
Q ss_pred hHHHHhhcCCCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEEC-CeEEEEecc
Q 022475 158 REPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAED-GKVKLFPVI 236 (296)
Q Consensus 158 ~~~~~~~l~~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~-~~~~~~~~~ 236 (296)
.+.++++++++|++++|++|++.+ + .++++++++.+.++ ...| +.+++|+|++|+++++. ++.+++|++
T Consensus 190 ~~~~~~~l~~~dil~~n~~ea~~l-g-----~~~~~~~~~~l~~~---~~~g-~~vvvt~G~~G~~~~~~~~~~~~~~~~ 259 (312)
T 2hlz_A 190 REELFQLFGYGDVVFVSKDVAKHL-G-----FQSAEEALRGLYGR---VRKG-AVLVCAWAEEGADALGPDGKLLHSDAF 259 (312)
T ss_dssp CGGGGGGGGSSSEEEECHHHHHHT-T-----CCSHHHHHHHHGGG---SCTT-CEEEEECGGGCEEEECTTCCEEEECCC
T ss_pred hHHHHHHHhcCCEEEEcHHHHHHc-C-----CCCHHHHHHHHHHh---cCCC-CEEEEEecccCeEEEccCCCEEECCCC
Confidence 244667899999999999999876 3 35788888887543 2234 78999999999999874 557777764
Q ss_pred cCCCccccCCCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccC
Q 022475 237 LLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGC 287 (296)
Q Consensus 237 ~~~~~~vvd~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~ 287 (296)
+ .++++|||||||+|+|||+++|++|+++++|+++|+++|+.++++.|+
T Consensus 260 ~--~~~vvdt~GAGDaf~a~~~~~l~~g~~~~~a~~~a~~~aa~~v~~~G~ 308 (312)
T 2hlz_A 260 P--PPRVVDTLGAGDTFNASVIFSLSQGRSVQEALRFGCQVAGKKCGLQGF 308 (312)
T ss_dssp C--CSSCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSS
T ss_pred C--CCCcccCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhhcCc
Confidence 3 237999999999999999999999999999999999999999999997
No 46
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=100.00 E-value=9.6e-40 Score=284.61 Aligned_cols=254 Identities=17% Similarity=0.225 Sum_probs=204.7
Q ss_pred CCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecC-CchhHHHHHHHHhcCCceeEEe-cCCCCceeEEEEEe-CCeec
Q 022475 9 ENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGK-DKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERS 85 (296)
Q Consensus 9 ~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~-D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~~~~~ 85 (296)
......+||++.|+|+++++ +|.++.++|.+|+ | +|+ +++.|+++||+++++. .++.+|+.+++.++ ++++.
T Consensus 40 ~~~~~~~GG~~~NvA~~la~---LG~~~~~i~~vG~~D-~g~-i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~~~ 114 (326)
T 3b1n_A 40 PTMRREFGGCAGNIAYALNL---LGGDARMMGTLGAVD-AQP-YLDRMDALGLSREYVRVLPDTYSAQAMITTDLDNNQI 114 (326)
T ss_dssp CSCCCEEECHHHHHHHHHHH---TTCCEEEEEEEETTT-CHH-HHHHHHHHTCEEEEEEEETTCCCEEEEEEECTTCCCE
T ss_pred ccceeccCCHHHHHHHHHHH---cCCCeeEEEEECCcC-HHH-HHHHHHHcCCcccceEEcCCCCceEEEEEECCCCceE
Confidence 45677899999999999998 4599999999999 9 898 9999999999999985 56778999999887 56776
Q ss_pred eeeccccccccCccccCChhhhhhhhcceEEEEeccccccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhhc
Q 022475 86 LVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKAL 165 (296)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l 165 (296)
+....+++..+.++++.. ..++|++|+++. .++.+..+++.+++.++++++|+.... .....+.+++++
T Consensus 115 ~~~~~ga~~~~~~~~~~~------~~~~~~v~~~~~----~~~~~~~~~~~a~~~g~~v~~D~~~~~-~~~~~~~~~~~l 183 (326)
T 3b1n_A 115 TAFHPGAMMQSHVNHAGE------AKDIKLAIVGPD----GFQGMVQHTEELAQAGVPFIFDPGQGL-PLFDGATLRRSI 183 (326)
T ss_dssp EEEECGGGGGGGGSCGGG------CCSCSEEEECSC----CHHHHHHHHHHHHHHTCCEEECCGGGG-GGCCHHHHHHHH
T ss_pred EEEecChhhhcChhhccc------ccCCCEEEECCc----cHHHHHHHHHHHHHCCCEEEEeCchhh-hhccHHHHHHHH
Confidence 655566655555554432 278999999853 457788889999999999999985422 111235567888
Q ss_pred CCCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecccCCCccccC
Q 022475 166 PYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVD 245 (296)
Q Consensus 166 ~~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvd 245 (296)
+++|++++|++|++.+++... .+.++ +. +. ++.||+|+|++|++++++++.+++|++++. .++|
T Consensus 184 ~~~dil~~N~~Ea~~l~g~~~---~~~~~----l~------~~-~~~vvvT~G~~Ga~~~~~~~~~~~~~~~v~--~vvD 247 (326)
T 3b1n_A 184 ELATYIAVNDYEAKLVCDKTG---WSEDE----IA------SR-VQALIITRGEHGATIRHRDGTEQIPAVRAE--RVID 247 (326)
T ss_dssp HHCSEEEEEHHHHHHHHHHHC---CCHHH----HH------TT-SSEEEEECGGGCEEEEETTEEEEECCCCCS--CCCC
T ss_pred HhCCEEecCHHHHHHHhCCCC---CCHHH----HH------hc-CCEEEEecCCCceEEEECCcEEEeCCCCCC--CCCC
Confidence 999999999999999987542 13333 32 12 678999999999999999888888876652 3789
Q ss_pred CCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccCC--CCCCCC
Q 022475 246 TNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCT--YPPKPE 294 (296)
Q Consensus 246 ~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~~--~~~~~~ 294 (296)
||||||+|+|||+++|++|+++++|+++|+++|+.++++.|+. .|++++
T Consensus 248 ttGAGDaF~ag~l~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~~~~~e 298 (326)
T 3b1n_A 248 PTGCGDAFRGGLLYGIEHGFDWATAGRLASLMGALKIAHQGPQTYAPTRAE 298 (326)
T ss_dssp CTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSTTCCCCCHHH
T ss_pred CCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 9999999999999999999999999999999999999999983 466544
No 47
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=100.00 E-value=8e-40 Score=286.09 Aligned_cols=258 Identities=20% Similarity=0.253 Sum_probs=206.4
Q ss_pred CCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEe-cCCCCceeEEEEEe-CCeece
Q 022475 9 ENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSL 86 (296)
Q Consensus 9 ~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~~~~~~ 86 (296)
......+||++.|+|+++++ +|.++.++|.+|+| +|+ +++.|+++||+++++. .++.+|+.+++.++ ++++++
T Consensus 50 ~~~~~~~GG~~~NvA~~la~---LG~~~~~i~~vG~D-~g~-i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~~~~ 124 (334)
T 2pkf_A 50 DDLVMHRGGVAGNMAFAIGV---LGGEVALVGAAGAD-FAD-YRDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIA 124 (334)
T ss_dssp SEEEEEEECHHHHHHHHHHH---TTCEEEEECEECGG-GHH-HHHHHHTTTEECTTCEECSSCCCEEEEEEECTTCCEEE
T ss_pred ccceecCCChHHHHHHHHHH---cCCCeEEEEEEeCc-hHH-HHHHHHHCCCceeeeEecCCCCceEEEEEEcCCCCEEE
Confidence 45677899999999999998 45999999999999 999 9999999999999885 56678999998887 577777
Q ss_pred eeccccccccCccccCChhhhhhhhcceEEEEeccccccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhhcC
Q 022475 87 VANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP 166 (296)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~ 166 (296)
..+.+++..++++++.. ....+.++|++|++++ .++.+..+++.+++.++++++|+.... .....+.++++++
T Consensus 125 ~~~~ga~~~~~~~~~~~--~~~~l~~~~~v~~~~~----~~~~~~~~~~~a~~~g~~v~~D~~~~~-~~~~~~~l~~~l~ 197 (334)
T 2pkf_A 125 SFYPGAMSEARNIKLAD--VVSAIGKPELVIIGAN----DPEAMFLHTEECRKLGLAFAADPSQQL-ARLSGEEIRRLVN 197 (334)
T ss_dssp EEECGGGGGGGGCCHHH--HHHHHCSCSEEEEESC----CHHHHHHHHHHHHHHTCCEEEECGGGG-GTSCHHHHHTTTT
T ss_pred EECCchhhhCCHhhcCh--hhhhhcCCCEEEEcCC----ChHHHHHHHHHHHhcCCeEEEeccchh-hhhhHHHHHHHHh
Confidence 66666655565554432 1123578999999864 357788889999999999999985421 1112355778999
Q ss_pred CCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCe-EEEEecccCCCccccC
Q 022475 167 YMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGK-VKLFPVILLPKEKLVD 245 (296)
Q Consensus 167 ~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~-~~~~~~~~~~~~~vvd 245 (296)
++|++++|++|++.+++.... +.++ +. .. ++.+++|+|++|++++++++ .+++|+++++ .++|
T Consensus 198 ~~dil~~N~~E~~~l~g~~~~---~~~~----l~------~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~--~vvD 261 (334)
T 2pkf_A 198 GAAYLFTNDYEWDLLLSKTGW---SEAD----VM------AQ-IDLRVTTLGPKGVDLVEPDGTTIHVGVVPET--SQTD 261 (334)
T ss_dssp TCSEEEEEHHHHHHHHHHHCC---CHHH----HH------TT-CSCEEEECGGGCEEEECTTSCEEEECCCCCS--CCCC
T ss_pred cCCEEecCHHHHHHHhccCCC---CHHH----HH------hc-CCEEEEEeCCCCeEEEeCCCcEEEeCCcCCC--CCCC
Confidence 999999999999999875421 3332 32 22 67899999999999988877 8888876552 3789
Q ss_pred CCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhccCC--CCCCCC
Q 022475 246 TNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCT--YPPKPE 294 (296)
Q Consensus 246 ~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G~~--~~~~~~ 294 (296)
||||||+|+|||+++|++|+++++|+++|+++|+.++++.|+. .|++++
T Consensus 262 ttGAGDaF~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~e 312 (334)
T 2pkf_A 262 PTGVGDAFRAGFLTGRSAGLGLERSAQLGSLVAVLVLESTGTQEWQWDYEA 312 (334)
T ss_dssp CTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSSCCCCCHHH
T ss_pred CCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCCCCcCCCCHHH
Confidence 9999999999999999999999999999999999999999984 566554
No 48
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=100.00 E-value=3.7e-39 Score=279.47 Aligned_cols=257 Identities=21% Similarity=0.268 Sum_probs=205.8
Q ss_pred CceeecCChhHHHHHHHHHhhcCCC-cEEEEEeecCCchhHHHHHHHHhcCCceeEEe-cCCCCceeEEEEE--e-CCee
Q 022475 10 NVEYIAGGATQNSIKVAQWMLQIPG-ATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCV--V-GGER 84 (296)
Q Consensus 10 ~~~~~~GG~~~n~a~~~~~l~~lg~-~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~--~-~~~~ 84 (296)
+.+..+||++.|+|+++++ +|. ++.++|.||+| +|+.+++.|+++||+++++. .++.+|....-.. + ++++
T Consensus 22 ~~~~~~GG~~~NvA~~la~---LG~~~~~~ig~vG~D-~g~~~~~~L~~~gVd~~~v~~~~~~~T~~~~g~~~~~~~~~~ 97 (313)
T 3kd6_A 22 RSDNTLGGSSTYIALSASY---FTDEPIRMVGVVGSD-FGKEHFDLLHAKNIDTRGIQVIEDGKTFRWAGRYHYDMNTRD 97 (313)
T ss_dssp EEEEEEECHHHHHHHHHTT---TCSSCEEEEEEEETT-SCHHHHHHHHHTTEEEEEEEEETTCCCEEEEEEECTTSSCEE
T ss_pred cccccCCCHHHHHHHHHHH---hCCCceEEEEecCCC-cHHHHHHHHHHcCCCccceEEcCCCCeeeeeeeeeccccccc
Confidence 4578899999999999886 559 99999999999 99999999999999999985 4555663322111 2 3444
Q ss_pred ceeeccccccccCccccCChhhhhhhhcceEEEEeccccccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhh
Q 022475 85 SLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKA 164 (296)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 164 (296)
++....+....+.++ + .+.+.++|++|+++ ++++....+++.+ +.+.++++|+ .+.|.....+.++++
T Consensus 98 ~~~~~~~~~~~~~~~-~-----~~~~~~~~~v~~~~----~~~~~~~~~~~~~-~~~~~v~~Dp-~~~~~~~~~~~~~~~ 165 (313)
T 3kd6_A 98 TLDTQLNVFAEFDPH-V-----PQYYRDSKFVCLGN----IDPELQLKVLDQI-DDPKLVVCDT-MNFWIEGKPEELKKV 165 (313)
T ss_dssp EEEEECGGGTTCCCC-C-----CGGGTTCSEEEECS----SCHHHHHHHHTTC-SSCSEEEEEC-CHHHHHHCHHHHHHH
T ss_pred eeecccchHhhcCcc-c-----hHHHccCCEEEEcC----CCHHHHHHHHHHH-hhCCEEEEcC-hhhhhhhhHHHHHHH
Confidence 444444433344332 1 24578899999974 4567677777777 5788899998 455665567778899
Q ss_pred cCCCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecccCCCcccc
Q 022475 165 LPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLV 244 (296)
Q Consensus 165 l~~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vv 244 (296)
++++|++++|++|++.|++ .++++++++.|. +.|++.|++|+|++|++++++++.+++|++++. +++
T Consensus 166 l~~~dil~~N~~E~~~l~g-----~~~~~~~~~~l~------~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~--~vv 232 (313)
T 3kd6_A 166 LARVDVFIVNDSEARLLSG-----DPNLVKTARIIR------EMGPKTLIIKKGEHGALLFTDNGIFAAPAFPLE--SIY 232 (313)
T ss_dssp HTTCSEEEEEHHHHHHHHS-----CSCHHHHHHHHH------TTSCSEEEEECTTSCEEEEETTEEEEECCCTTC--CCS
T ss_pred HhcCCEEEeCHHHHHHHhC-----CCCHHHHHHHHH------HcCCCEEEEeeCCCcEEEEECCceEEeCCCCCC--CcC
Confidence 9999999999999999986 457888998884 578899999999999999999999998876542 689
Q ss_pred CCCCCchhhhHHHHHHHhcCC-----CHHHHHHHhhHHhhhhhhhccCC---CCCCCCC
Q 022475 245 DTNGAGDAFVGGFLSQLVQEK-----PVEDCVRTGCYAANVVIQRSGCT---YPPKPEF 295 (296)
Q Consensus 245 d~tGaGDaf~ag~~~~l~~~~-----~~~~a~~~A~~~aa~~~~~~G~~---~~~~~~~ 295 (296)
|||||||+|+|||+++|++|+ ++++|+++|+++|+.++++.|+. .|+++|+
T Consensus 233 dttGAGDaf~a~~~~~l~~g~~~~~~~l~~a~~~a~~~aa~~v~~~G~~~~~~~~~~ev 291 (313)
T 3kd6_A 233 DPTGAGDTFAGGFIGHLARCGNTSEAEMRKAVLYGSAMASFCVEQFGPYRYNDLDLLEV 291 (313)
T ss_dssp CCTTHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHTTSSTTGGGGTCCHHHH
T ss_pred CCCCccHHHHHHHHHHHHcCCCccccCHHHHHHHHHHHHHHHHeecCCCCCCCCCHHHH
Confidence 999999999999999999998 89999999999999999999994 4665543
No 49
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=3.1e-40 Score=284.32 Aligned_cols=261 Identities=17% Similarity=0.131 Sum_probs=204.2
Q ss_pred hHhhhcCCCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEecCCCCceeEEEEEeC
Q 022475 2 YDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVG 81 (296)
Q Consensus 2 ~~~~~~~~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~ 81 (296)
.|++.+..+.+..+||++.|+|+++++ +|.++.++|.+|+|. +.+++.|+++||+++++.. +.+|+.+.+...+
T Consensus 22 ~~~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~i~~vG~D~--~~~~~~L~~~gVd~~~v~~-~~~t~~~~i~~~~ 95 (298)
T 1vk4_A 22 KDVNVVDGKREIAYGGGVVMGAITSSL---LGVKTKVITKCTRED--VSKFSFLRDNGVEVVFLKS-PRTTSIENRYGSD 95 (298)
T ss_dssp EEEEEETTEEEEEEECHHHHHHHHHHH---TTCEEEEEEEECTTT--GGGGTTTGGGTCEEEEEEC-SSCEEEEEEC---
T ss_pred CceEeecCeEEEecCCHHHHHHHHHHH---cCCceEEEEEEcCCH--HHHHHHHHHcCCceEEEec-CCCcEEEEEEcCC
Confidence 356677788889999999999999998 459999999999996 7788999999999998864 3456666555336
Q ss_pred CeeceeeccccccccCccccCChhhhhhhhcceEEEEeccccccChHHHHHHHHHHhhCCCEEEEeCCchhhh-------
Q 022475 82 GERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFIC------- 154 (296)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------- 154 (296)
|+++++...+++..++++.+.. .+++++|++++.. .+....+++.+++++.++++|+.. ...
T Consensus 96 g~~~~~~~~~~~~~l~~~~~~~-------~~~~~v~~~~~~~---~~~~~~~~~~~~~~g~~v~~D~~~-~~~~~~~~~~ 164 (298)
T 1vk4_A 96 PDTRESFLISAADPFTESDLAF-------IEGEAVHINPLWY---GEFPEDLIPVLRRKVMFLSADAQG-FVRVPENEKL 164 (298)
T ss_dssp --CCEEEEEECCCCCCGGGGGG-------CCSSEEEECCSST---TSSCGGGHHHHHHHCSEEEEETHH-HHEEEETTEE
T ss_pred CCeeEEEeccccccCCHHHcCc-------CCCCEEEECCccc---ccccHHHHHHHHHcCCEEEEecCc-cccccccccc
Confidence 8888776666665666554431 5789999987632 122235667777789999999853 211
Q ss_pred -hhhhHHHHhhcCCCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEE
Q 022475 155 -EFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLF 233 (296)
Q Consensus 155 -~~~~~~~~~~l~~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~ 233 (296)
....+.++++++++|++++|++|++.+++ .++++++++.+. ..|++.||+|+ ++|++++++ +.+++
T Consensus 165 ~~~~~~~~~~~l~~~dil~~N~~E~~~l~g-----~~~~~~~~~~l~------~~g~~~vvvT~-~~G~~~~~~-~~~~~ 231 (298)
T 1vk4_A 165 VYRDWEMKEKYLKYLDLFKVDSREAETLTG-----TNDLRESCRIIR------SFGAKIILATH-ASGVIVFDG-NFYEA 231 (298)
T ss_dssp EECCCTTHHHHGGGCSEEEEEHHHHHHHHS-----CSCHHHHHHHHH------HTTCSSEEEEE-TTEEEEESS-SEEEE
T ss_pred cccchHHHHhhcccCCEEecCHHHHHHHhC-----CCCHHHHHHHHH------hcCCCEEEEEc-CCCcEEEeC-CEEEe
Confidence 11223467789999999999999999986 347888888884 56788999999 999999877 77788
Q ss_pred ecccCCCccccCCCCCchhhhHHHHHHHhc-CCCHHHHHHHhhHHhhhhhhhccC-CCCCCCCC
Q 022475 234 PVILLPKEKLVDTNGAGDAFVGGFLSQLVQ-EKPVEDCVRTGCYAANVVIQRSGC-TYPPKPEF 295 (296)
Q Consensus 234 ~~~~~~~~~vvd~tGaGDaf~ag~~~~l~~-~~~~~~a~~~A~~~aa~~~~~~G~-~~~~~~~~ 295 (296)
|++++ +++|||||||+|+|||+++|++ |+++++|+++|+++|+.++++.|+ ..|+.+|+
T Consensus 232 ~~~~v---~vvDttGAGDaF~a~~~~~l~~~g~~~~~a~~~A~a~aa~~v~~~G~~~~~~~~el 292 (298)
T 1vk4_A 232 SFRSW---SLEGRTGRGDTCTAAFLVGFVFKKMSIEKATKFAAAVTSVKMRHPGPLRREDLEAI 292 (298)
T ss_dssp ECCCS---SGGGGTTHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHTTSSSSCCGGGGGGC
T ss_pred ccCCc---ccCCCcCccHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHccCCCCCCCCHHHH
Confidence 76544 8999999999999999999999 999999999999999999999998 44666665
No 50
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=100.00 E-value=6.2e-39 Score=277.01 Aligned_cols=241 Identities=20% Similarity=0.234 Sum_probs=195.9
Q ss_pred CCCceeecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEe-cCCCCceeEEEEEeCCeece
Q 022475 8 KENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVVGGERSL 86 (296)
Q Consensus 8 ~~~~~~~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~~~~~~~ 86 (296)
..+....+||++.|+|+++++ +|.++.++|.+|+| +|+.+++.|+++||+++++. .++.+|+.+++++++|+|++
T Consensus 48 ~~~~~~~~GG~~~NvA~~la~---LG~~~~~i~~vG~D-~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~g~r~~ 123 (306)
T 3bf5_A 48 VKDLRPRFGGTAGNFAIVAQK---FRIPFDLYSAVGMK-THREYLAMIESMGINTGHVEKFEDESGPICYIATDGKKQVS 123 (306)
T ss_dssp CSEEEEEEEHHHHHHHHHHHH---TTCCCEEEEEEETT-TCHHHHHHHHHTTCCCTTEEEETTCCCSEEEEEECSSCEEE
T ss_pred CcceEecCCChHHHHHHHHHH---cCCCeEEEEEEeCC-hHHHHHHHHHHcCCCchheEecCCCCCceEEEEEcCCeeEE
Confidence 345678899999999999997 45999999999999 99999999999999999984 67778999999887788888
Q ss_pred eeccccccccCccccCChhhhhhhhcceEEEEeccccccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhhcC
Q 022475 87 VANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP 166 (296)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~ 166 (296)
+.+.+++..++ +++. .++|++|++++. .+.++++.+++ ++++|+....| ....+.++++++
T Consensus 124 ~~~~ga~~~~~-~~l~--------~~~~~v~~~~~~------~~~~~~~~a~~---~v~~D~~~~~~-~~~~~~~~~~l~ 184 (306)
T 3bf5_A 124 FMHQGAMAAWA-PQLA--------DEYEYVHFSTGP------NYLDMAKSIRS---KIIFDPSQEIH-KYSKDELKKFHE 184 (306)
T ss_dssp EEECTHHHHCC-CCCC--------SCEEEEEECSSS------SHHHHHHHCCS---EEEECCGGGGG-GSCHHHHHHHHH
T ss_pred EEeCChhhhhh-Hhhc--------CCCCEEEECChH------HHHHHHHHhCC---cEEEcCchhhh-hccHHHHHHHHh
Confidence 77777665555 3221 679999998743 45667776664 89999974333 123456778889
Q ss_pred CCcEEEcCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecccCCCccccCC
Q 022475 167 YMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDT 246 (296)
Q Consensus 167 ~~dv~~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvd~ 246 (296)
++|++++|++|++.+++....+.. .+ . +++|+|++|++++++++.+++|++++ + +||
T Consensus 185 ~~dil~~N~~E~~~l~g~~~~~~~-------~l------~------vvvT~G~~Ga~~~~~~~~~~~~~~~v---~-vDt 241 (306)
T 3bf5_A 185 ISYMSIFNDHEYRVFREMTGLSSP-------KV------T------TIVTNGERGSSLFMDGKKYDFPAIPS---S-GDT 241 (306)
T ss_dssp HCSEEEEEHHHHHHHHHHHCCSSC-------SS------C------EEEEEGGGEEEEEETTEEEEEECCCC---C-SCC
T ss_pred cCCEEEcCHHHHHHHhCCCCcCcc-------cE------E------EEEeecccCeEEEeCCcEEEecCCcC---C-CCC
Confidence 999999999999999875422110 11 1 99999999999999988888887655 7 999
Q ss_pred CCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhh--ccC--CCCCCCC
Q 022475 247 NGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQR--SGC--TYPPKPE 294 (296)
Q Consensus 247 tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~--~G~--~~~~~~~ 294 (296)
|||||+|+|||+++|++|+++++|+++|+++|+.++++ .|+ ..|++++
T Consensus 242 tGAGDaF~ag~~~~l~~g~~~~~a~~~A~~~aa~~v~~~~~G~~~~~p~~~e 293 (306)
T 3bf5_A 242 VGAGDSFRAGLYLALYNRRSIEKGMIYGTIIAHHVIDDGIENFSLNMEDLER 293 (306)
T ss_dssp TTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHCSTTCCCCHHHHHH
T ss_pred CCccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCCccccccCCCHHH
Confidence 99999999999999999999999999999999999999 998 3455443
No 51
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=99.93 E-value=3.5e-26 Score=197.82 Aligned_cols=219 Identities=15% Similarity=0.157 Sum_probs=151.2
Q ss_pred cEEEEEeecCCchhHHHHHHHHhcCCceeEEecC--CCCceeEEEEEeCCeeceeeccccccccCccccCC-hhhhhh--
Q 022475 35 ATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDE--SAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKR-PEIWSI-- 109 (296)
Q Consensus 35 ~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~--~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-- 109 (296)
++.++|.+|+|. |+.+ |+++||+++++... ..+|+..+ ..+ ..++++++.. .+.+..
T Consensus 12 ~~~~~g~vG~D~-g~~i---L~~~GV~~~~v~~~~~~~~t~~~~------------~~g--~~l~~~~i~~~~~~~~~~~ 73 (312)
T 2yxt_A 12 SHVIRGYVGNRA-ATFP---LQVLGFEIDAVNSVQFSNHTGYAH------------WKG--QVLNSDELQELYEGLRLNN 73 (312)
T ss_dssp EEESSSCSTHHH-HHHH---HHHTTCEEEEEEEEEESSCTTSSC------------CCE--EECCHHHHHHHHHHHHHTT
T ss_pred cccCCCccchHh-hHHH---HHHcCCeEEEEEEEEecCCCCcCC------------ccC--ccCCHHHHHHHHHHHHhcC
Confidence 577889999997 9888 99999999988531 12332221 111 2344444432 001111
Q ss_pred hhcceEEEEeccccccCh---HHHHHHHHHHhhCCC--EEEEeCCch--------hhh-hhhhHHHHh-hcCCCcEEEcC
Q 022475 110 VEKAKYYYIAGFFLTVSP---ESIQMVAEHAAAKNK--VFMMNLSAP--------FIC-EFFREPQEK-ALPYMDYVFGN 174 (296)
Q Consensus 110 ~~~~~~~~i~g~~~~~~~---~~~~~~~~~~~~~~~--~~~~d~~~~--------~~~-~~~~~~~~~-~l~~~dv~~~n 174 (296)
+.++|++++ |+.. ++ +.+..+++.++++|. ++++||... .|. ....+.+.. +++++|++++|
T Consensus 74 ~~~~~~v~~-G~~~--~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~~~~~~~l~~~ll~~~dil~pN 150 (312)
T 2yxt_A 74 MNKYDYVLT-GYTR--DKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVPEDLLPVYKEKVVPLADIITPN 150 (312)
T ss_dssp CCCCSEEEE-CCCC--CHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSCTTHHHHHHHTTGGGCSEECCC
T ss_pred CccCCEEEE-CCCC--CHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCCHHHHHHHHHHhhhhCCEEcCC
Confidence 567899776 4332 32 445578888888775 488897421 121 123445654 89999999999
Q ss_pred HHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCC------cEEEE-------EC-C----eEEEEecc
Q 022475 175 ETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGAD------PVVVA-------ED-G----KVKLFPVI 236 (296)
Q Consensus 175 ~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~------G~~~~-------~~-~----~~~~~~~~ 236 (296)
.+|++.|++....+.+++.++++.+. ..|++.||||+|+. |++++ ++ + +.++++++
T Consensus 151 ~~Ea~~L~g~~~~~~~~~~~~~~~l~------~~g~~~VvvT~G~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (312)
T 2yxt_A 151 QFEAELLSGRKIHSQEEALRVMDMLH------SMGPDTVVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMERIRMDIR 224 (312)
T ss_dssp HHHHHHHHSCCCCSHHHHHHHHHHHH------HHSCSEEEECCCSCCCTTCTTEEEEEEEEEC----CCCCEEEEEEEEE
T ss_pred HHHHHHHhCCCCCCHHHHHHHHHHHH------HcCCCEEEEecccCCCCCCCceEEEEEeccccccccccccceEEEeec
Confidence 99999998743333345667777774 46788999998886 47665 44 2 66777776
Q ss_pred cCCCccccCCCCCchhhhHHHHHHHhc-CCCHHHHHHHhhHHhhhhhhh
Q 022475 237 LLPKEKLVDTNGAGDAFVGGFLSQLVQ-EKPVEDCVRTGCYAANVVIQR 284 (296)
Q Consensus 237 ~~~~~~vvd~tGaGDaf~ag~~~~l~~-~~~~~~a~~~A~~~aa~~~~~ 284 (296)
++ ++ |||||||+|+|+|+++|++ |+++++|+++|+++++.++++
T Consensus 225 ~v---~v-dttGAGDaf~a~~~~~l~~~g~~l~~a~~~A~a~a~~~v~~ 269 (312)
T 2yxt_A 225 KV---DA-VFVGTGDLFAAMLLAWTHKHPNNLKVACEKTVSTLHHVLQR 269 (312)
T ss_dssp CC---SS-CCSSHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHH
T ss_pred cc---CC-CCCCchHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 65 55 9999999999999999999 999999999999999888864
No 52
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=99.92 E-value=5.5e-25 Score=187.72 Aligned_cols=226 Identities=14% Similarity=0.123 Sum_probs=155.0
Q ss_pred CcEEE-EEeecCCchhHHHHHHHHhcCCceeEEecCCCCceeEEEEEe-CCeeceeeccccccccCccccCC--hhhhh-
Q 022475 34 GATSY-IGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKR--PEIWS- 108 (296)
Q Consensus 34 ~~v~~-~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~- 108 (296)
..... +|.+|.| .....|++.||++.++.. .+ ..+ .+.+. ..+ ..++++.+.. ..+.+
T Consensus 21 i~~~~~~g~~G~d----~~~~~l~~~Gv~~~~v~t-------~i-~~~~~g~~~---~~g--~~~~~~~~~~~~~~l~~~ 83 (283)
T 2ddm_A 21 VQSQVVYGSVGNS----IAVPAIKQNGLNVFAVPT-------VL-LSNTPHYDT---FYG--GAIPDEWFSGYLRALQER 83 (283)
T ss_dssp EEEEESSSSSTHH----HHHHHHHHTTCCEEEEEE-------EE-ESSCTTSSC---CCE--EECCHHHHHHHHHHHHHT
T ss_pred EecccCCCcchHH----HHHHHHHHcCCeeeEEeE-------EE-eccCCCcCc---eee--eeCCHHHHHHHHHHHHhc
Confidence 44343 6777777 346789999999998742 11 222 33333 111 2333333322 01111
Q ss_pred -hhhcceEEEEeccccccChHHHHHHHHHHhh--CCCEEEEeCCch-----hhhh-hhhHH-HHhhcCCCcEEEcCHHHH
Q 022475 109 -IVEKAKYYYIAGFFLTVSPESIQMVAEHAAA--KNKVFMMNLSAP-----FICE-FFREP-QEKALPYMDYVFGNETEA 178 (296)
Q Consensus 109 -~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~-----~~~~-~~~~~-~~~~l~~~dv~~~n~~E~ 178 (296)
.+.++++++++........+.+.++++.+++ .++++++|+... .|.. ...+. .+.+++++|++++|..|+
T Consensus 84 ~~~~~~~~v~~G~l~~~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~E~ 163 (283)
T 2ddm_A 84 DALRQLRAVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFEL 163 (283)
T ss_dssp TCCTTCCEEEECCCSCHHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEECCBHHHH
T ss_pred CCcccCCEEEECCcCCHHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEecCCHHHH
Confidence 3457899998653332233567778888877 789999997421 2211 11222 246889999999999999
Q ss_pred HHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCC-------cEEEEECCeEEEEecccCCCccccCCCCCch
Q 022475 179 RTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGAD-------PVVVAEDGKVKLFPVILLPKEKLVDTNGAGD 251 (296)
Q Consensus 179 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~-------G~~~~~~~~~~~~~~~~~~~~~vvd~tGaGD 251 (296)
+.|++....+.++..++++.+ ...|++.||+|.|++ |++++++++.++++++++ . +|++||||
T Consensus 164 ~~L~g~~~~~~~~~~~~a~~l------~~~g~~~Vvvt~G~~~~~~~~~G~~~~~~~~~~~~~~~~v---~-vdt~GAGD 233 (283)
T 2ddm_A 164 EILTGKNCRDLDSAIAAAKSL------LSDTLKWVVVTSASGNEENQEMQVVVVTADSVNVISHSRV---K-TDLKGTGD 233 (283)
T ss_dssp HHHHTSCCSSHHHHHHHHHHH------CCSSCCEEEEEC-------CEEEEEEEETTEEEEEEEECC---C-CCCCCHHH
T ss_pred HHHhCCCCCCHHHHHHHHHHH------HHcCCCEEEEccccCccCCCceeEEEEeCCceEEEeecee---C-CCCCChHH
Confidence 999875432234566777777 567889999999999 889888888888887654 4 89999999
Q ss_pred hhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhcc
Q 022475 252 AFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSG 286 (296)
Q Consensus 252 af~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~G 286 (296)
+|+|+|+++|++|+++++|+++|+++++.++++..
T Consensus 234 af~a~~~~~l~~g~~~~~A~~~A~a~a~~~v~~~~ 268 (283)
T 2ddm_A 234 LFCAQLISGLLKGKALTDAVHRAGLRVLEVMRYTQ 268 (283)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998764
No 53
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=99.90 E-value=3.7e-24 Score=182.97 Aligned_cols=162 Identities=10% Similarity=0.082 Sum_probs=121.3
Q ss_pred cceEEEEeccccccChHHHHHHHHHHhhCCCE-EEEeCCch------hhhhhhhHHHHh-hcCCCcEEEcCHHHHHHHHH
Q 022475 112 KAKYYYIAGFFLTVSPESIQMVAEHAAAKNKV-FMMNLSAP------FICEFFREPQEK-ALPYMDYVFGNETEARTFAK 183 (296)
Q Consensus 112 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~~~------~~~~~~~~~~~~-~l~~~dv~~~n~~E~~~l~~ 183 (296)
++|++++.. ..+.+.+..+++.+++.+.+ +++|+... .|.....+.+.. +++++|++++|..|++.|++
T Consensus 94 ~~~~v~~G~---l~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~g~~l~~~~~~~~l~~~ll~~~dil~pN~~Ea~~L~g 170 (288)
T 1jxh_A 94 RIDTTKIGM---LAETDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLPEAAALLD 170 (288)
T ss_dssp CCSEEEECC---CCSHHHHHHHHHHHHHTTCCSEEEECCCC------CCCHHHHHHHHHHTGGGCSEEECBHHHHHHHHT
T ss_pred CCCEEEECC---CCCHHHHHHHHHHHHHCCCCeEEEcCcccCCCCCccCCHHHHHHHHHHHHhhCcEEcCCHHHHHHHcC
Confidence 368877753 22567888899999998986 99997532 122222233443 78999999999999999987
Q ss_pred H-cCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCc-----EEEEECCeEEEEecccCCCccccCCCCCchhhhHHH
Q 022475 184 V-HGWETDNVEEIALKISQWPKASGTHKRITVITQGADP-----VVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGF 257 (296)
Q Consensus 184 ~-~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G-----~~~~~~~~~~~~~~~~~~~~~vvd~tGaGDaf~ag~ 257 (296)
. ...+.++..++++.+. +.|++.||+|.|++| ++++++++.++++++++ +++||+||||+|+|+|
T Consensus 171 ~~~~~~~~~~~~~a~~l~------~~g~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~---~~vdttGAGD~f~a~~ 241 (288)
T 1jxh_A 171 APHARTEQEMLAQGRALL------AMGCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPRV---NTKNTHGTGCTLSAAL 241 (288)
T ss_dssp CCCCCSHHHHHHHHHHHH------HTTCSEEEEBC---------CEEECSSCEEEC---CC---CCSCCBTHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHH------HhCCCEEEEeccCCCCCceeEEEEECCeEEEEecccc---CCCCCCCchHHHHHHH
Confidence 5 3323345667777774 467889999999999 88888777777776544 7899999999999999
Q ss_pred HHHHhcCCCHHHHHHHhhHHhhhhhhhc
Q 022475 258 LSQLVQEKPVEDCVRTGCYAANVVIQRS 285 (296)
Q Consensus 258 ~~~l~~~~~~~~a~~~A~~~aa~~~~~~ 285 (296)
+++|++|+++++|+++|+++++.++++.
T Consensus 242 ~a~l~~g~~~~~A~~~A~a~a~~~v~~~ 269 (288)
T 1jxh_A 242 AALRPRHRSWGETVNEAKAWLSAALAQA 269 (288)
T ss_dssp HHHGGGSSSHHHHHHHHHHHHHHHHTTG
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999776
No 54
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=99.89 E-value=1.1e-22 Score=171.13 Aligned_cols=162 Identities=15% Similarity=0.160 Sum_probs=124.6
Q ss_pred cceEEEEeccccccChHHHHHHHHHHhhCC-CEEEEeCCch------hhhhhhhHHH-HhhcCCCcEEEcCHHHHHHHHH
Q 022475 112 KAKYYYIAGFFLTVSPESIQMVAEHAAAKN-KVFMMNLSAP------FICEFFREPQ-EKALPYMDYVFGNETEARTFAK 183 (296)
Q Consensus 112 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~------~~~~~~~~~~-~~~l~~~dv~~~n~~E~~~l~~ 183 (296)
+.+.+++.. + .+++.+..+++.+++.+ +++++|+... .|.+...+.+ +.+++++|++++|..|++.|++
T Consensus 70 ~~~~v~~G~--l-~~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~g~~l~~~~~~~~~~~~ll~~~dil~pN~~E~~~L~g 146 (258)
T 1ub0_A 70 PLHAAKTGA--L-GDAAIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLAKEAAAALKERLFPLADLVTPNRLEAEALLG 146 (258)
T ss_dssp CCSEEEECC--C-CSHHHHHHHHHHHHHTTCCSEEECCCC---------CHHHHHHHHHHTGGGCSEECCBHHHHHHHHC
T ss_pred CCCEEEECC--c-CCHHHHHHHHHHHHhCCCCcEEECCeeecCCCCcccChHHHHHHHHhhcccCeEEeCCHHHHHHHhC
Confidence 367777742 1 25577888888888888 7899998432 2222222334 4578999999999999999987
Q ss_pred HcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCC-c----EEEEECCeEEEEecccCCCccccCCCCCchhhhHHHH
Q 022475 184 VHGWETDNVEEIALKISQWPKASGTHKRITVITQGAD-P----VVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFL 258 (296)
Q Consensus 184 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~-G----~~~~~~~~~~~~~~~~~~~~~vvd~tGaGDaf~ag~~ 258 (296)
....+.++..++++.+. +.|++.|++|.|++ | ++++++++.++++++++ +++||+||||+|+|+|+
T Consensus 147 ~~~~~~~~~~~~a~~l~------~~g~~~vvvt~g~~~G~~~~~~~~~~~~~~~~~~~~~---~~~dt~GaGD~f~a~~~ 217 (258)
T 1ub0_A 147 RPIRTLKEAEEAAKALL------ALGPKAVLLKGGHLEGEEAVDLLATRGGVLRFSAPRV---HTRNTHGTGCTLSAAIA 217 (258)
T ss_dssp SCCCSHHHHHHHHHHHH------TTSCSCEEEEEEECC---EEEEEEETTEEEEEEECCC---CCSCCTTHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHH------HcCCCEEEEccCCCCCCceEEEEEeCCeEEEEecccc---CCCCCCChHHHHHHHHH
Confidence 54323345667777774 46788999999998 8 78888888888877554 78999999999999999
Q ss_pred HHHhcCCCHHHHHHHhhHHhhhhhhhc
Q 022475 259 SQLVQEKPVEDCVRTGCYAANVVIQRS 285 (296)
Q Consensus 259 ~~l~~~~~~~~a~~~A~~~aa~~~~~~ 285 (296)
++|++|+++++|+++|+++++.++++.
T Consensus 218 ~~l~~g~~~~~a~~~a~~~~~~~~~~~ 244 (258)
T 1ub0_A 218 ALLAKGRPLAEAVAEAKAYLTRALKTA 244 (258)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998754
No 55
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=99.86 E-value=2.5e-21 Score=164.04 Aligned_cols=162 Identities=16% Similarity=0.147 Sum_probs=125.9
Q ss_pred cceEEEEeccccccChHHHHHHHHHHhhCCC-EEEEeCCch--hh----hhhhhHHHH-hhcCCCcEEEcCHHHHHHHHH
Q 022475 112 KAKYYYIAGFFLTVSPESIQMVAEHAAAKNK-VFMMNLSAP--FI----CEFFREPQE-KALPYMDYVFGNETEARTFAK 183 (296)
Q Consensus 112 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~--~~----~~~~~~~~~-~~l~~~dv~~~n~~E~~~l~~ 183 (296)
+.|.+++.. . .+++.+..+++.+++.+. ++++|+... .+ .+...+.+. ++++++|+++||..|++.|++
T Consensus 74 ~~d~v~~G~-l--~~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~diltpN~~E~~~L~g 150 (271)
T 2i5b_A 74 GVDAMKTGM-L--PTVDIIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQLSG 150 (271)
T ss_dssp CCSEEEECC-C--CSHHHHHHHHHHHHHTTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEECCBHHHHHHHHT
T ss_pred CCCEEEECC-C--CCHHHHHHHHHHHHhCCCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEEcCCHHHHHHHhC
Confidence 578888853 1 236778888898888888 599997421 11 111223454 678999999999999999987
Q ss_pred Hc-CCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCC--CcE----EEEECCeEEEEecccCCCccccCCCCCchhhhHH
Q 022475 184 VH-GWETDNVEEIALKISQWPKASGTHKRITVITQGA--DPV----VVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGG 256 (296)
Q Consensus 184 ~~-~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~--~G~----~~~~~~~~~~~~~~~~~~~~vvd~tGaGDaf~ag 256 (296)
.. ..+.++..++++.+. +.|.+.||+|.|+ +|+ +++++++.++++.+++ +++||+||||+|+|+
T Consensus 151 ~~~~~~~~~~~~~a~~l~------~~g~~~Vvvt~g~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~dt~GaGD~f~a~ 221 (271)
T 2i5b_A 151 MDELKTVDDMIEAAKKIH------ALGAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMI---DTPYTHGAGCTFSAA 221 (271)
T ss_dssp CCCCCSHHHHHHHHHHHH------TTTCSEEEEECGGGSCSSSEEEEEECSSCEEEEEECCC---CCSCCBTHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHH------HhCCCEEEEcCCCCCCCCceEEEEEeCCeEEEEecccc---CCCCCCChHHHHHHH
Confidence 54 222335667777774 5678899999999 784 6667777788877654 789999999999999
Q ss_pred HHHHHhcCCCHHHHHHHhhHHhhhhhhhc
Q 022475 257 FLSQLVQEKPVEDCVRTGCYAANVVIQRS 285 (296)
Q Consensus 257 ~~~~l~~~~~~~~a~~~A~~~aa~~~~~~ 285 (296)
|+++|++|+++++|+++|+++++.++++.
T Consensus 222 ~~~~l~~g~~~~~A~~~A~~~~~~~~~~~ 250 (271)
T 2i5b_A 222 VTAELAKGAEVKEAIYAAKEFITAAIKES 250 (271)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999875
No 56
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=99.83 E-value=2.9e-20 Score=158.75 Aligned_cols=165 Identities=13% Similarity=0.147 Sum_probs=124.6
Q ss_pred hcceEEEEecccc-ccChHHHHHHHHHHhhCC--CEEEEeCCc------hhhhhhhhHHHH-hhcCCCcEEEcCHHHHHH
Q 022475 111 EKAKYYYIAGFFL-TVSPESIQMVAEHAAAKN--KVFMMNLSA------PFICEFFREPQE-KALPYMDYVFGNETEART 180 (296)
Q Consensus 111 ~~~~~~~i~g~~~-~~~~~~~~~~~~~~~~~~--~~~~~d~~~------~~~~~~~~~~~~-~~l~~~dv~~~n~~E~~~ 180 (296)
.+.|++ .+|+.. ....+.+.++++.+++++ .++++||-. ..|.+...+.++ .+++++|+++||..|++.
T Consensus 76 ~~~d~v-~~G~l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~ 154 (289)
T 3pzs_A 76 KDCDAV-LSGYIGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVAPGVAEFFCNEALPASDMIAPNLLELEQ 154 (289)
T ss_dssp GGCCEE-EECCCSSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCHHHHHHHHHTHHHHCSEECCCHHHHHH
T ss_pred cCCCEE-EECCCCCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccCHHHHHHHHHHhhccCCEEeCCHHHHHH
Confidence 578885 556542 122356777777777766 789999621 223333445555 478899999999999999
Q ss_pred HHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeC-CCcE-------EEEECCeEEEEecccCCCccc--cCCCCCc
Q 022475 181 FAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQG-ADPV-------VVAEDGKVKLFPVILLPKEKL--VDTNGAG 250 (296)
Q Consensus 181 l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G-~~G~-------~~~~~~~~~~~~~~~~~~~~v--vd~tGaG 250 (296)
|++....+.++..++++.+ .+.|++.|++|.| .+|+ +++++++.++++.+++ ++ +|++|+|
T Consensus 155 L~g~~~~~~~~~~~aa~~l------~~~g~~~Vvvt~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~dt~GaG 225 (289)
T 3pzs_A 155 LSGERVENVEQAVQVARSL------CARGPKVVLVKHLSRAGYHADCFEMLLVTADDAWHICRPLV---DFGKRQPVGVG 225 (289)
T ss_dssp HHTSCCCSHHHHHHHHHHH------HTTSCSEEEECCCGGGSSCTTEEEEEEECSSCEEEEEEECC---CCTTSCCTTHH
T ss_pred HhCCCCCCHHHHHHHHHHH------HHHCCCEEEEecccCCCCCCCeEEEEEEeCCeEEEEEeeee---cCCCCCCCcHH
Confidence 9986543345666777777 4678899999985 4776 7777777888776655 45 9999999
Q ss_pred hhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhc
Q 022475 251 DAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRS 285 (296)
Q Consensus 251 Daf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~ 285 (296)
|+|+|+|++++++|+++++|+++|+++++.++++.
T Consensus 226 D~f~a~~~~~l~~g~~~~~A~~~A~~~~~~~i~~t 260 (289)
T 3pzs_A 226 DLTSGLLLVNLLKGEPLDKALEHVTAAVYEVMLKT 260 (289)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988887753
No 57
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=99.82 E-value=1.9e-19 Score=152.77 Aligned_cols=162 Identities=15% Similarity=0.110 Sum_probs=127.1
Q ss_pred cceEEEEeccccccChHHHHHHHHHHhhC-CCEEEEeCCch----hh---hhhhhHHHHhhcCCCcEEEcCHHHHHHHHH
Q 022475 112 KAKYYYIAGFFLTVSPESIQMVAEHAAAK-NKVFMMNLSAP----FI---CEFFREPQEKALPYMDYVFGNETEARTFAK 183 (296)
Q Consensus 112 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~----~~---~~~~~~~~~~~l~~~dv~~~n~~E~~~l~~ 183 (296)
+.|.+.+. +. .+++.+..+.+.+++. +.++++||-.. .| .+...+.++++++++|+++||..|++.|++
T Consensus 74 ~~daik~G-~l--~s~~~i~~v~~~l~~~~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll~~adiitpN~~Ea~~L~g 150 (282)
T 3h74_A 74 HFDQALIG-YV--GSVALCQQITTYLEQQTLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQQADVILPNTTEAALLTG 150 (282)
T ss_dssp CCSEEEEC-CC--CSHHHHHHHHHHHHHSCCSEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCCHHHHHHHHT
T ss_pred ccCEEEEC-CC--CCHHHHHHHHHHHHHCCCCcEEEcCeeecCCCCCCCCCHHHHHHHHHHhccCCEECCCHHHHHHHhC
Confidence 57888884 22 2566666677666664 57899998322 13 234456677899999999999999999998
Q ss_pred HcCCCCCCHHHHHHHHhcCCCCCCCCc-eEEEEeeCC----CcEEEEE-CCeEEEEecccCCCccccCCCCCchhhhHHH
Q 022475 184 VHGWETDNVEEIALKISQWPKASGTHK-RITVITQGA----DPVVVAE-DGKVKLFPVILLPKEKLVDTNGAGDAFVGGF 257 (296)
Q Consensus 184 ~~~~~~~~~~~~~~~l~~~~~~~~~g~-~~vvvt~G~----~G~~~~~-~~~~~~~~~~~~~~~~vvd~tGaGDaf~ag~ 257 (296)
....+.++.+++++.+. .+.|+ +.|++|.|. .|+++++ +++.++++.+++ .+|++|+||+|+|+|
T Consensus 151 ~~~~~~~~~~~aa~~L~-----~~~g~~~~Vvvt~G~~~~~~g~~~~~~~~~~~~~~~~~v----~~dt~GaGD~fsaai 221 (282)
T 3h74_A 151 APYQVTPDLEVILPALQ-----AQLKTGAHAVITDVQRADQIGCAWLDEAGHVQYCGARRL----PGHYNGTGDTLAAVI 221 (282)
T ss_dssp CCCCSSCCHHHHHHHHH-----TTSCTTCEECEEEEEETTEEEEEEECTTSCEEEEEEECC----SSCCTTHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHH-----HHhCCCCEEEEEecCCCCceEEEEEeCCCeEEEEEecCC----CCCCcCHHHHHHHHH
Confidence 65545578899999985 22788 899999985 7888875 677777776544 389999999999999
Q ss_pred HHHHhcCCCHHHHHHHhhHHhhhhhhhc
Q 022475 258 LSQLVQEKPVEDCVRTGCYAANVVIQRS 285 (296)
Q Consensus 258 ~~~l~~~~~~~~a~~~A~~~aa~~~~~~ 285 (296)
+++|++|+++++|+++|+++++.++++.
T Consensus 222 ~a~l~~g~~l~~A~~~A~~~~~~ai~~~ 249 (282)
T 3h74_A 222 AGLLGRGYPLAPTLARANQWLNMAVAET 249 (282)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998753
No 58
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=99.79 E-value=6.1e-19 Score=150.47 Aligned_cols=161 Identities=13% Similarity=0.109 Sum_probs=119.5
Q ss_pred cceEEEEeccccccCh---HHHHHHHHHHhhCCCEEEEeCCch----hhh---hhhhHHHHhhcCCCcEEEcCHHHHHHH
Q 022475 112 KAKYYYIAGFFLTVSP---ESIQMVAEHAAAKNKVFMMNLSAP----FIC---EFFREPQEKALPYMDYVFGNETEARTF 181 (296)
Q Consensus 112 ~~~~~~i~g~~~~~~~---~~~~~~~~~~~~~~~~~~~d~~~~----~~~---~~~~~~~~~~l~~~dv~~~n~~E~~~l 181 (296)
+.|.+.+ |+.. ++ +.+.++++.+++.+.++++||... .|. +...+.++++++++|+++||..|++.|
T Consensus 77 ~~~aik~-G~l~--s~~~i~~v~~~l~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll~~adiitpN~~Ea~~L 153 (291)
T 3mbh_A 77 QFDAIYT-GYLG--SPRQIQIVSDFIKDFRQPDSLIVADPVLGDNGRLYTNFDMEMVKEMRHLITKADVITPNLTELFYL 153 (291)
T ss_dssp CCSEEEE-CCCS--STTHHHHHHHHHHHHCCTTCEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCBHHHHHHH
T ss_pred ccCEEEE-CCCC--CHHHHHHHHHHHHHhcCCCCcEEECceeeeCCCCCCCCCHHHHHHHHHHhccCCEEeCCHHHHHHH
Confidence 5777777 3321 33 445555565555678999998432 122 334456778999999999999999999
Q ss_pred HHHcCC---CCCCHHHHHHHHhcCCCCCCCCceEEEEeeCC-------CcEEEEEC--CeEEEEecccCCCccccCCCCC
Q 022475 182 AKVHGW---ETDNVEEIALKISQWPKASGTHKRITVITQGA-------DPVVVAED--GKVKLFPVILLPKEKLVDTNGA 249 (296)
Q Consensus 182 ~~~~~~---~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~-------~G~~~~~~--~~~~~~~~~~~~~~~vvd~tGa 249 (296)
++.... +.++.+++++.+. +.|++.|++|.|+ .|++++++ ++.++++.+++ . +|++|+
T Consensus 154 ~g~~~~~~~~~~~~~~aa~~L~------~~g~~~Vvvtgg~~~~~~g~~g~~~~~~~~~~~~~~~~~~~---~-~dt~Ga 223 (291)
T 3mbh_A 154 LDEPYKADSTDEELKEYLRLLS------DKGPQVVIITSVPVHDEPHKTSVYAYNRQGNRYWKVTCPYL---P-AHYPGT 223 (291)
T ss_dssp HTCCCCSCCCHHHHHHHHHHHH------HTSCSEEEEEEEEETTEEEEEEEEEEETTTTEEEEEEESCC---G-GGSTTH
T ss_pred hCCCCCCCCCHHHHHHHHHHHH------hhCCCEEEEEeccccCCCCcEEEEEEeCCCCeEEEEEeccc---C-CCCCCh
Confidence 975422 2345677777774 5678999999654 57777776 35666766443 4 899999
Q ss_pred chhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhhc
Q 022475 250 GDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRS 285 (296)
Q Consensus 250 GDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~~ 285 (296)
||+|+|+|+++|++|+++++|+++|+++++.++++.
T Consensus 224 GD~f~aai~a~l~~g~~l~~A~~~A~~~~~~ai~~~ 259 (291)
T 3mbh_A 224 GDTFTSVITGSLMQGDSLPMALDRATQFILQGIRAT 259 (291)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998888753
No 59
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=99.78 E-value=1.3e-18 Score=148.98 Aligned_cols=162 Identities=13% Similarity=0.064 Sum_probs=115.2
Q ss_pred hcceEEEEeccccc-cChHHHHHHHHHHhhCC------CEEEEeCCc----hhh-hhhhhHHHHhhcCCCcEEEcCHHHH
Q 022475 111 EKAKYYYIAGFFLT-VSPESIQMVAEHAAAKN------KVFMMNLSA----PFI-CEFFREPQEKALPYMDYVFGNETEA 178 (296)
Q Consensus 111 ~~~~~~~i~g~~~~-~~~~~~~~~~~~~~~~~------~~~~~d~~~----~~~-~~~~~~~~~~~l~~~dv~~~n~~E~ 178 (296)
.+.|.+.+ |+... ..-+.+.++++..++.+ .++++||-. ..| .+...+.++++++++|+++||..|+
T Consensus 75 ~~~daV~t-G~l~s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~~~~~~~~~~~Ll~~adiitPN~~Ea 153 (300)
T 3zs7_A 75 SNYRYILT-GYINNVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYCKKEVLDAYRELVPLADIVTPNYFEA 153 (300)
T ss_dssp GGCSEEEE-CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC---------CTHHHHHHHHGGGCSEECCCHHHH
T ss_pred ccCCEEEE-CCCCCHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeecCHHHHHHHHHHhhhCCEecCCHHHH
Confidence 46787555 54421 11245556666666544 689999821 122 2345566777999999999999999
Q ss_pred HHHHHHcCCCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCc-------EEEEEC------CeEEEEecccCCCccccC
Q 022475 179 RTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADP-------VVVAED------GKVKLFPVILLPKEKLVD 245 (296)
Q Consensus 179 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G-------~~~~~~------~~~~~~~~~~~~~~~vvd 245 (296)
+.|++....+.++..++++.| ...|++.|++|.|+.| +++..+ ++.++++.+++ +. |
T Consensus 154 ~~L~g~~~~~~~~~~~aa~~L------~~~G~~~Vvvt~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~v---~~-~ 223 (300)
T 3zs7_A 154 SLLSGVTVNDLSSAILAADWF------HNCGVAHVIIKSFREQENPTHLRFLYSVKEGSEAAVRRFSGVVPYH---EG-R 223 (300)
T ss_dssp HHHHSSCCCSHHHHHHHHHHH------HHHTCSEEEEEEEC---CCSEEEEEEEECCSTTSCCEEEEEEEECC---SS-C
T ss_pred HHHhCCCCCCHHHHHHHHHHH------HHhCCCEEEEecCcCCCCCceEEEEEeccccccCCCeEEEEEeccC---CC-C
Confidence 999976544445666777777 3568899999999988 333334 46777776655 44 8
Q ss_pred CCCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhhh
Q 022475 246 TNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQR 284 (296)
Q Consensus 246 ~tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~~ 284 (296)
++|+||+|+|+|+++| +|+++++|+++|+++...+++.
T Consensus 224 ~~GtGD~fsaal~a~l-~g~~~~~Av~~A~~~v~~~i~~ 261 (300)
T 3zs7_A 224 YTGTGDVFAACLLAFS-HSHPMDVAIGKSMAVLQELIIA 261 (300)
T ss_dssp BTTHHHHHHHHHHHHH-TTSCHHHHHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 9999999999999997777764
No 60
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=99.70 E-value=1e-16 Score=135.28 Aligned_cols=159 Identities=14% Similarity=0.063 Sum_probs=106.6
Q ss_pred hhhhhcceEEEEeccccc-cChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhhcC--CCcEEEcCHHHHHHHHH
Q 022475 107 WSIVEKAKYYYIAGFFLT-VSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP--YMDYVFGNETEARTFAK 183 (296)
Q Consensus 107 ~~~~~~~~~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~--~~dv~~~n~~E~~~l~~ 183 (296)
.+.+..++.+++..-.+. ...+.+..+++.+++.++++++|+..........+..+++++ +.++++||..|+..|++
T Consensus 53 ~~~~~~a~~lvi~~G~~~~~~~~~~~~~~~~a~~~~~pvVlDp~g~~~~~~~~~~~~~ll~~~~~~vitPN~~E~~~L~g 132 (272)
T 1ekq_A 53 ADMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIREVRLAAIRGNAAEIAHTVG 132 (272)
T ss_dssp HHHHHHSSEEEEECTTCCHHHHHHHHHHHHHHHHTTCCEEEECTTBTTBHHHHHHHHHHHHHSCCSEEEECHHHHHHHCC
T ss_pred HHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHHhcCCeEEEeCCCcCcccchHHHHHHHHccCCCeEECCCHHHHHHHhC
Confidence 344677899988432221 112556677788888999999999643211111223345555 89999999999999986
Q ss_pred Hc-C--------CCCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecccCCCccccCCCCCchhhh
Q 022475 184 VH-G--------WETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFV 254 (296)
Q Consensus 184 ~~-~--------~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvd~tGaGDaf~ 254 (296)
.. . .+.++..++++.+. +.+...|++| |..+ ++.++++.++++... ..+.|++|+||+|.
T Consensus 133 ~~~~~~~gvd~~~~~~~~~~aa~~l~------~~~~~vVv~~-G~~~-~i~~~~~~~~~~~~~---~~~~~ttGaGD~la 201 (272)
T 1ekq_A 133 VTDWLIKGVDAGEGGGDIIRLAQQAA------QKLNTVIAIT-GEVD-VIADTSHVYTLHNGH---KLLTKVTGAGCLLT 201 (272)
T ss_dssp ---------------HHHHHHHHHHH------HHHTSEEEEC-SSSE-EEECSSCEEEECCCC---GGGGGSTTHHHHHH
T ss_pred CCcccccCccCCCCHHHHHHHHHHHH------HHcCCEEEEE-CCCC-EEEeCCEEEEEcCCC---ccccCccCchHHHH
Confidence 43 2 12334556666664 2223445555 8887 555666677776533 26779999999998
Q ss_pred HHHHHHHhcCCCHHHHHHHhhH
Q 022475 255 GGFLSQLVQEKPVEDCVRTGCY 276 (296)
Q Consensus 255 ag~~~~l~~~~~~~~a~~~A~~ 276 (296)
|.+.+.+.+|.++.+|+++|+.
T Consensus 202 g~iaa~la~g~~~~~A~~~A~~ 223 (272)
T 1ekq_A 202 SVVGAFCAVEENPLFAAIAAIS 223 (272)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHHHHHH
Confidence 8888888999999999999996
No 61
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=99.60 E-value=4.3e-15 Score=137.08 Aligned_cols=159 Identities=14% Similarity=0.158 Sum_probs=112.7
Q ss_pred cceEEEEeccccccChHHHHHH---HHHHhhCCCEEEEeCCc------hhhhhhhhHHHH-hhcCCCcEEEcCHHHHHHH
Q 022475 112 KAKYYYIAGFFLTVSPESIQMV---AEHAAAKNKVFMMNLSA------PFICEFFREPQE-KALPYMDYVFGNETEARTF 181 (296)
Q Consensus 112 ~~~~~~i~g~~~~~~~~~~~~~---~~~~~~~~~~~~~d~~~------~~~~~~~~~~~~-~~l~~~dv~~~n~~E~~~l 181 (296)
+.|.+.++- . +++.+..+ ++..++.+.++++|+-. ..+.+...+.+. .+++.+|+|+||..|++.|
T Consensus 91 ~~daIkiG~---l-s~~~i~~v~~~l~~~~~~~~~vVlDPvm~a~~g~~l~~~~~~~~l~~~Ll~~a~iitPN~~Ea~~L 166 (550)
T 3rm5_A 91 KCNVIKTGM---L-TAAAIEVLHEKLLQLGENRPKLVVDPVLVATSGSSLAGKDIVSLITEKVAPFADILTPNIPECYKL 166 (550)
T ss_dssp CCSEEEECS---C-CHHHHHHHHHHHHHHGGGSCEEEECCCC---------CTTHHHHHHHHTGGGCSEECCBHHHHHHH
T ss_pred CCCEEEECC---C-CHHHHHHHHHHHHHhcccCCCEEEecceecCCCCcCCCHHHHHHHHHHhhCcceEEecCHHHHHHH
Confidence 678888852 2 66554444 44444457889999842 122233344455 7889999999999999999
Q ss_pred HHHc--CCCCCCHHHHHHHHhcCCCCCCCCc-eEEEEeeCCCc--------E--EEE--ECCeEEEEecccCCCccccCC
Q 022475 182 AKVH--GWETDNVEEIALKISQWPKASGTHK-RITVITQGADP--------V--VVA--EDGKVKLFPVILLPKEKLVDT 246 (296)
Q Consensus 182 ~~~~--~~~~~~~~~~~~~l~~~~~~~~~g~-~~vvvt~G~~G--------~--~~~--~~~~~~~~~~~~~~~~~vvd~ 246 (296)
++.. ..+.++..++++.+. +.|. +.||+|.|+.+ + +++ ++++.++++.+.+ +.+|+
T Consensus 167 ~g~~~~i~~~~d~~~aa~~L~------~~g~~~~VvvkgG~~~~~g~~~~~~~d~l~~~~~~~~~~~~~~~v---~~~~t 237 (550)
T 3rm5_A 167 LGEERKVNGLQDIFQIAKDLA------KITKCSNILVKGGHIPWNDEKEKYITDVLFLGAEQKFIIFKGNFV---NTTHT 237 (550)
T ss_dssp HSCCCCCCSSHHHHHHHHHHH------HHHCCSCEEEEECC-------CCEEEEEEEETTTTEEEEEEEECC---CCSCC
T ss_pred hCCCCCCCCHHHHHHHHHHHH------HhCCCCEEEEeCCCCCcccCCCCeEEEEEEEcCCCeEEEEEecCc---CCCCC
Confidence 9753 223346777777774 4444 78999998864 3 455 4566777776544 67899
Q ss_pred CCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhhhhh
Q 022475 247 NGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQ 283 (296)
Q Consensus 247 tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~~~~ 283 (296)
+|+||+|+|+|++.|++|+++++|+++|+..-..+++
T Consensus 238 ~GtGD~fsaaiaa~La~G~~l~eAv~~A~~~v~~ai~ 274 (550)
T 3rm5_A 238 HGTGCTLASAIASNLARGYSLPQSVYGGIEYVQNAVA 274 (550)
T ss_dssp BTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred cChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999975555544
No 62
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=99.37 E-value=5e-12 Score=105.96 Aligned_cols=162 Identities=14% Similarity=0.077 Sum_probs=107.8
Q ss_pred hhhhhhcceEEEEeccccccChH---HHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhhcC-CCcEEEcCHHHHHHH
Q 022475 106 IWSIVEKAKYYYIAGFFLTVSPE---SIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP-YMDYVFGNETEARTF 181 (296)
Q Consensus 106 ~~~~~~~~~~~~i~g~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~-~~dv~~~n~~E~~~l 181 (296)
..+.+..+|.+++..-.+ +++ .+..+++.+++.++++++|+..........+....+++ ..++++||..|+..|
T Consensus 50 ~~~~~~~~dalvi~~G~~--~~~~~~~~~~~~~~a~~~~~pvVlDpv~~~~~~~~~~~~~~ll~~~~~vITPN~~E~~~L 127 (265)
T 1v8a_A 50 LEEMIRLADAVVINIGTL--DSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISAL 127 (265)
T ss_dssp HHHHHHHCSEEEEECTTC--CHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHCCSEEEEEHHHHHHH
T ss_pred HHHHHHHCCEEEEEECCC--CHHHHHHHHHHHHHHHHcCCcEEEcCccccccccCHHHHHHHHHhCCcEEcCCHHHHHHH
Confidence 445678899999964222 333 45566777888899999999653221111222233332 289999999999999
Q ss_pred HHHcC----CC----C-CCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecccCCCccccCCCCCchh
Q 022475 182 AKVHG----WE----T-DNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDA 252 (296)
Q Consensus 182 ~~~~~----~~----~-~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvd~tGaGDa 252 (296)
++... .+ . ++..++++.+.+ .. ...|++| |..+. ++++++.++++.... ...+++|+||+
T Consensus 128 ~g~~~~~~gvd~~~~~~~~~~~aa~~la~-----~~-~~~Vvlk-G~~d~-i~~~~~~~~~~~g~~---~~~~~~GtGD~ 196 (265)
T 1v8a_A 128 LGEEGKTRGVDSLEYGEEEAKKLTMNAAR-----EF-NTTVAVT-GAVDY-VSDGRRTFAVYNGHE---LLGRVTGTGCM 196 (265)
T ss_dssp HHHHC----------CHHHHHHHHHHHHH-----HT-TSEEEEE-SSSEE-EECSSCEEEECCCCG---GGGGSTTHHHH
T ss_pred hCCcccccCcCcccccHHHHHHHHHHHHH-----Hh-CcEEEEc-CCCcE-EEcCCEEEEEcCCCc---CcCCccChhHH
Confidence 98652 11 1 345566666642 22 3457777 77764 446666777664322 45699999999
Q ss_pred hhHHHHHHHhcCCCHHHHHHHhhHHhhhh
Q 022475 253 FVGGFLSQLVQEKPVEDCVRTGCYAANVV 281 (296)
Q Consensus 253 f~ag~~~~l~~~~~~~~a~~~A~~~aa~~ 281 (296)
|+|.+.+.+++|.+ .+|+..|...-+.+
T Consensus 197 Lsg~iaa~lA~g~~-~~Aa~~a~~~~~~A 224 (265)
T 1v8a_A 197 VAALTGAFVAVTEP-LKATTSALVTFGIA 224 (265)
T ss_dssp HHHHHHHHHTTSCH-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCC-HHHHHHHHHHHHHH
Confidence 99999999999999 88888776554433
No 63
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A
Probab=99.07 E-value=5.6e-10 Score=95.35 Aligned_cols=154 Identities=17% Similarity=0.166 Sum_probs=92.3
Q ss_pred hhhhcceEEEEeccccccChH---HHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhhc--CCCcEEEcCHHHHHHHH
Q 022475 108 SIVEKAKYYYIAGFFLTVSPE---SIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKAL--PYMDYVFGNETEARTFA 182 (296)
Q Consensus 108 ~~~~~~~~~~i~g~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l--~~~dv~~~n~~E~~~l~ 182 (296)
+.+...|.+.++. .+..+.+ .+..+++..+ .++++++|+....+..... .++ +..++++||..|+..|+
T Consensus 107 ~~~~~~dav~IG~-Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~g~~ll~~~~----~~l~~~~~~viTPN~~E~~~L~ 180 (310)
T 2r3b_A 107 NVVEQADVILIGP-GLGLDATAQQILKMVLAQHQ-KQQWLIIDGSAITLFSQGN----FSLTYPEKVVFTPHQMEWQRLS 180 (310)
T ss_dssp HHHHHCSEEEECT-TCCSSHHHHHHHHHHHHHCC-TTCEEEEETHHHHHHHHTT----CCCSSGGGEEEECCHHHHHHHH
T ss_pred HHhccCCEEEEeC-CCCCCHHHHHHHHHHHHhcC-CCCcEEEcCCcchhcccch----hhhcCCCCEEEcCCHHHHHHHh
Confidence 3456789999962 1222333 3334444332 4789999985443221111 123 35789999999999998
Q ss_pred HHcCCCCC-CH-HHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecccCCCccccCCCCCchhhhHHHHHH
Q 022475 183 KVHGWETD-NV-EEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQ 260 (296)
Q Consensus 183 ~~~~~~~~-~~-~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvd~tGaGDaf~ag~~~~ 260 (296)
+....+.+ +. .++++.+ ++ +|+.-| .+.++++++..+. ... .....+++|+||+++|.+...
T Consensus 181 g~~~~~~~~~~a~~aA~~l---------g~--~VvlKG-~~~vi~~~~~~~~-~~~---g~~~~~t~GtGD~Lag~Iaa~ 244 (310)
T 2r3b_A 181 HLPIEQQTLANNQRQQAKL---------GS--TIVLKS-HRTTIFHAGEPFQ-NTG---GNPGMATGGTGDTLAGIIAGF 244 (310)
T ss_dssp CCCGGGCCHHHHHHHHHHH---------TS--EEEECS-TTCEEECSSSCEE-CCC---CCGGGCSTTHHHHHHHHHHHH
T ss_pred CCCCCcccchHHHHHHHHh---------Cc--EEEEeC-CceEEEECCEEEE-ECC---CCCCCCCCChHHHHHHHHHHH
Confidence 64322221 23 4444444 23 344345 4556656444443 332 236789999999975555555
Q ss_pred HhcCCCHHHHHHHhhHHhhhhhh
Q 022475 261 LVQEKPVEDCVRTGCYAANVVIQ 283 (296)
Q Consensus 261 l~~~~~~~~a~~~A~~~aa~~~~ 283 (296)
+++|+++.+|++.|+.+.+...+
T Consensus 245 lA~g~~~~eA~~~A~~~~~~ag~ 267 (310)
T 2r3b_A 245 LAQFKPTIETIAGAVYLHSLIGD 267 (310)
T ss_dssp HHHSCSSHHHHHHHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHHHHHHHHH
Confidence 57999999999999877776544
No 64
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}
Probab=99.06 E-value=2.9e-10 Score=97.21 Aligned_cols=157 Identities=9% Similarity=0.069 Sum_probs=92.2
Q ss_pred hhhhcceEEEEeccccccChH---HHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhhc-CCCcEEEcCHHHHHHHHH
Q 022475 108 SIVEKAKYYYIAGFFLTVSPE---SIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKAL-PYMDYVFGNETEARTFAK 183 (296)
Q Consensus 108 ~~~~~~~~~~i~g~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l-~~~dv~~~n~~E~~~l~~ 183 (296)
+.+...|.+.++. .+..+++ .+.++++.++ .++++++|+..........+ .++ +..++|+||..|+..|++
T Consensus 121 ~~~~~~dav~IG~-Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~g~~ll~~~~~---l~L~~~~~viTPN~~E~~~L~g 195 (311)
T 3bgk_A 121 EQITAADVVLMGP-GLAEDDLAQTTFDVVWQAIE-PKQTLIIDGSAINLLAKRKP---AIWPTKQIILTPHQKEWERLSG 195 (311)
T ss_dssp HHHHHCSEEEECT-TCCSSHHHHHHHHHHHHHCC-TTSEEEEETHHHHHHHHCC----CCCSCSCEEEECCSCC-CTTTC
T ss_pred HHhccCCEEEEcC-CCCCCHHHHHHHHHHHHHcC-CCCeEEEeCChhhhhccChh---hcCCCCCEEECCcHHHHHHHhC
Confidence 3456789999962 1222333 3334444332 47899999954332111111 113 467899999999999886
Q ss_pred HcCCCC-CCH-HHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecccCCCccccCCCCCchhhhHHHHHHH
Q 022475 184 VHGWET-DNV-EEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQL 261 (296)
Q Consensus 184 ~~~~~~-~~~-~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvd~tGaGDaf~ag~~~~l 261 (296)
....+. ++. .++++.+ .+ ++ +|+.-| .+.++++++..+ +.... ....+++|+||++++.+...+
T Consensus 196 ~~~~~~~~d~~~~aa~~l------~~-g~--~VvlkG-~~~~i~~~~~~~-~~~~~---~~~~~t~GtGD~Lag~iaa~l 261 (311)
T 3bgk_A 196 LTIPEQIEAATQTALAHF------PK-ET--ILVAKS-HQTKIYQGQKIG-HIQVG---GPYQATGGMGDTLAGMIAGFV 261 (311)
T ss_dssp CCSTTCCHHHHHHHHTTS------CT-TC--EEEECS-SSCEEEETTEEE-EECCC---CGGGCSTTHHHHHHHHHHHHH
T ss_pred CCCCcchhhHHHHHHHHH------hc-CC--EEEEeC-CCeEEEECCEEE-EECCC---CCCCCCCcHHHHHHHHHHHHH
Confidence 432221 123 3344444 33 42 344344 556666654444 33333 367899999999844444445
Q ss_pred hc-CCCHHHHHHHhhHHhhhhhh
Q 022475 262 VQ-EKPVEDCVRTGCYAANVVIQ 283 (296)
Q Consensus 262 ~~-~~~~~~a~~~A~~~aa~~~~ 283 (296)
++ |+++.+|+++|+.+.+.+.+
T Consensus 262 A~~g~~~~eA~~~A~~~~~~ag~ 284 (311)
T 3bgk_A 262 AQFHTDRFEVAAAAVFLHSYIAD 284 (311)
T ss_dssp HHCCSCHHHHHHHHHHHHHHHHH
T ss_pred HccCCCHHHHHHHHHHHHHHHHH
Confidence 69 99999999999877776544
No 65
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=99.01 E-value=5.3e-09 Score=87.29 Aligned_cols=164 Identities=16% Similarity=0.117 Sum_probs=105.2
Q ss_pred hhhhhhhcceEEEEeccccccCh---HHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhhc-CCCcEEEcCHHHHHH
Q 022475 105 EIWSIVEKAKYYYIAGFFLTVSP---ESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKAL-PYMDYVFGNETEART 180 (296)
Q Consensus 105 ~~~~~~~~~~~~~i~g~~~~~~~---~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l-~~~dv~~~n~~E~~~ 180 (296)
+..+....++.++|+.-. ..+ +.+...++.+++.++|+++|+..-.......+..+.++ ...++|++|..|+..
T Consensus 51 e~~e~~~~a~alvIn~G~--l~~~~~~~~~~a~~~a~~~~~PvVlDPVg~gas~~r~~~~~~Ll~~~~~VItpN~~E~~~ 128 (273)
T 3dzv_A 51 EFPQMFQQTSALVLNLGH--LSQEREQSLLAASDYARQVNKLTVVDLVGYGASDIRNEVGEKLVHNQPTVVKGNLSEMRT 128 (273)
T ss_dssp GHHHHHTTCSEEEEECCS--CCHHHHHHHHHHHHHHHHTTCCEEEECTTTTSCHHHHHHHHHHHHTCCSEEEEEHHHHHH
T ss_pred HHHHHHHHCCeEEEecCC--CChHHHHHHHHHHHHHHHcCCcEEEchhhcCCcccCHHHHHHHHhcCCcEECCCHHHHHH
Confidence 355567889999997422 233 34556667788889999999954322111122222222 368999999999999
Q ss_pred HHHHcCC----CC-------C---CHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecccCCCccccCC
Q 022475 181 FAKVHGW----ET-------D---NVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDT 246 (296)
Q Consensus 181 l~~~~~~----~~-------~---~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvd~ 246 (296)
|.+.... +. + +..++++.+.+ ..+...|++|- ..- +++++++.+.++.-.. ..-++
T Consensus 129 L~g~~~~~~GVds~~~~~~~~~~~d~~~aa~~la~-----~~~~~~VvlkG-~~D-~i~dg~~~~~~~~G~~---~~~~v 198 (273)
T 3dzv_A 129 FCQLVSHGRGVDGSPLDQSEEAIEELIQALRQQTQ-----KFPQTVFLATG-IQD-VLVSQEQVIVLQNGVP---ELDCF 198 (273)
T ss_dssp HTTCCCC-------CGGGSHHHHHHHHHHHHHHHH-----HSTTCEEEEES-SSE-EEECSSCEEEECCCCG---GGGSS
T ss_pred HhCCcccccccccccccchhhhhHHHHHHHHHHHH-----HhCCeEEEEEC-Cee-EEEcCCEEEEeCCCCc---ccCCc
Confidence 9875321 11 1 33455666642 23325677764 333 4446666666653221 34567
Q ss_pred CCCchhhhHHHHHHHhcCCCHHHHHHHhhHHhhh
Q 022475 247 NGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANV 280 (296)
Q Consensus 247 tGaGDaf~ag~~~~l~~~~~~~~a~~~A~~~aa~ 280 (296)
+|.||++.|.+.+.+++|.++.+|+..|...=+.
T Consensus 199 ~GtGc~Ls~~Iaa~lA~g~~~~~Aa~~A~~~~~~ 232 (273)
T 3dzv_A 199 TGTGDLVGALVAALLGEGNAPMTAAVAAVSYFNL 232 (273)
T ss_dssp TTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999888765433
No 66
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=98.86 E-value=1.6e-08 Score=91.69 Aligned_cols=158 Identities=12% Similarity=0.103 Sum_probs=100.7
Q ss_pred hhhhhcceEEEEeccccccC-hHHHHHHHH-HHhhCCCEEEEeCCchhhhhhhhHHHHhhcCCCcEEEcCHHHHHHHHHH
Q 022475 107 WSIVEKAKYYYIAGFFLTVS-PESIQMVAE-HAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKV 184 (296)
Q Consensus 107 ~~~~~~~~~~~i~g~~~~~~-~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dv~~~n~~E~~~l~~~ 184 (296)
.+.+..+|.++++. ++. .+....+++ .+++.++++++|+....... .+.+ +..+..++++||..|+..|++.
T Consensus 315 ~~~~~~~davviGp---Glg~~~~~~~~~~~~l~~~~~pvVlDadgl~~l~--~~ll-~~~~~~~vlTPN~~E~~~L~g~ 388 (502)
T 3rss_A 315 LELSKDVDVVAIGP---GLGNNEHVREFVNEFLKTLEKPAVIDADAINVLD--TSVL-KERKSPAVLTPHPGEMARLVKK 388 (502)
T ss_dssp HHHHTTCSEEEECT---TCCCSHHHHHHHHHHHHHCCSCEEECHHHHHTCC--HHHH-HHCSSCEEECCCHHHHHHHHTC
T ss_pred HHHhccCCEEEEeC---CCCCCHHHHHHHHHHHHhcCCCEEEeCcccchhc--HHHH-hccCCCEEEeCCHHHHHHHhCC
Confidence 34567899999974 332 233333333 45566899999985433211 1222 2345678999999999999864
Q ss_pred cCCC-CCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecccCCCccccCCCCCchhhhHHHHHHHhc
Q 022475 185 HGWE-TDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQ 263 (296)
Q Consensus 185 ~~~~-~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvd~tGaGDaf~ag~~~~l~~ 263 (296)
...+ .++ .+.++.+.+ ..++ +|+.-|. +.+++++++.+..+ .. ....+++|+||+|+|.+.+.+++
T Consensus 389 ~~~~~~~d-~~aa~~la~-----~~~~--~VvlKG~-~~vi~~~~~~~~~~-~g---~~~~at~GsGD~Lag~iaa~lA~ 455 (502)
T 3rss_A 389 TVGDVKYN-YELAEEFAK-----ENDC--VLVLKSA-TTIVTDGEKTLFNI-TG---NTGLSKGGSGDVLTGMIAGFIAQ 455 (502)
T ss_dssp CHHHHTTC-HHHHHHHHH-----HHTS--EEEECSS-SEEEECSSCEEEEC-CC---CGGGSSTTHHHHHHHHHHHHHHT
T ss_pred CccchHHH-HHHHHHHHH-----HcCC--EEEEeCC-CeEEEcCCEEEEEC-CC---CCccccCCchHHHHHHHHHHHhC
Confidence 2111 234 556666642 2222 4444454 44555666555433 22 25689999999998888888889
Q ss_pred CCCHHHHHHHhhHHhhhhhh
Q 022475 264 EKPVEDCVRTGCYAANVVIQ 283 (296)
Q Consensus 264 ~~~~~~a~~~A~~~aa~~~~ 283 (296)
|.++.+|+++|+.+-+.+.+
T Consensus 456 g~~~~~Aa~~A~~~hg~Ag~ 475 (502)
T 3rss_A 456 GLSPLEASTVSVYLHGFAAE 475 (502)
T ss_dssp TCCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 99999999999877766544
No 67
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=98.80 E-value=7.9e-09 Score=86.72 Aligned_cols=147 Identities=16% Similarity=0.120 Sum_probs=94.5
Q ss_pred hhcceEEEEeccccccC-hHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhhcCCCcEEEcCHHHHHHHHHHcCCC
Q 022475 110 VEKAKYYYIAGFFLTVS-PESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWE 188 (296)
Q Consensus 110 ~~~~~~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dv~~~n~~E~~~l~~~~~~~ 188 (296)
+.+.|++++.. ++. .+...++++.+.+.+.++++|.....+ +.+ ......++++||..|+..|++....+
T Consensus 96 l~~~davviGP---Glg~~~~~~~~~~~~l~~~~p~VlDAdal~~-----~~l-~~~~~~~vlTPN~~E~~~L~g~~~~~ 166 (279)
T 3rpz_A 96 EETYRAIAIGP---GLPQTESVQQAVDHVLTADCPVILDAGALAK-----RTY-PKREGPVILTPHPGEFFRMTGVPVNE 166 (279)
T ss_dssp SSCCSEEEECT---TCCCCHHHHHHHHHHTTSSSCEEECGGGCCS-----CCC-CCCSSCEEECCCHHHHHHHHCCCHHH
T ss_pred ccCCCEEEECC---CCCCCHHHHHHHHHHHhhCCCEEEECCccch-----hhh-hhccCCEEEecCHHHHHHHhCCCccc
Confidence 57799999964 333 245566777777788899999854331 100 01234689999999999998643211
Q ss_pred -CCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecccCCCccccCCCCCchhhhHHHHHHHhcCCCH
Q 022475 189 -TDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPV 267 (296)
Q Consensus 189 -~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvd~tGaGDaf~ag~~~~l~~~~~~ 267 (296)
.++..++++.+.+ ..++ .|++ -|. +.++++++..+++.... ....+++|+||++++.+...+.+|.++
T Consensus 167 ~~~d~~~aa~~la~-----~~~~-~Vvl-KG~-~~vi~~~~g~~~~~~~g---~~~~at~GtGD~Lag~iaa~lA~g~~~ 235 (279)
T 3rpz_A 167 LQKKRAEYAKEWAA-----QLQT-VIVL-KGN-QTVIAFPDGDCWLNPTG---NGALAKGGTGDTLTGMILGMLCCHEDP 235 (279)
T ss_dssp HTTSHHHHHHHHHH-----HHTS-EEEE-CST-TCEEECTTSCEEECCCC---CGGGCSTTHHHHHHHHHHHHHHHCSSH
T ss_pred hHHHHHHHHHHHHH-----HcCe-EEEE-eCC-CcEEECCCceEEEeCCC---CCCCCCCChHHHHHHHHHHHHHCCCCH
Confidence 2456666766642 2232 4444 344 34555655444443322 256789999998876666667899999
Q ss_pred HHHHHHhhH
Q 022475 268 EDCVRTGCY 276 (296)
Q Consensus 268 ~~a~~~A~~ 276 (296)
.+|++.|..
T Consensus 236 ~~A~~~a~~ 244 (279)
T 3rpz_A 236 KHAVLNAVY 244 (279)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999875
No 68
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=98.71 E-value=4.9e-07 Score=80.43 Aligned_cols=76 Identities=13% Similarity=0.081 Sum_probs=57.2
Q ss_pred hcceEEEEeccccccC--------hHHH---HHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhhcCCCcEEEcCHHHHH
Q 022475 111 EKAKYYYIAGFFLTVS--------PESI---QMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEAR 179 (296)
Q Consensus 111 ~~~~~~~i~g~~~~~~--------~~~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dv~~~n~~E~~ 179 (296)
+.+|+++++|++.... .+.+ .+.++..+..++++-++...-.........++.+++++|.+-+|++|+.
T Consensus 235 ~~~d~~vLSGlq~m~~~y~dg~~~~~~l~~~~e~i~~l~~~~~~iH~E~As~~~~~l~~~i~~~i~p~vDSlGmNEqELa 314 (474)
T 3drw_A 235 KEVDGAIFSGYQGLRTKYSDGKDANYYLRRAKEDIIEFKEKDVKIHVEFASVQDRKLRKKIITNILPFVDSVGIDEAEIA 314 (474)
T ss_dssp HHCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHHHHHTTCEEEEECCCCSCHHHHHHHHHHTGGGSSEEEEEHHHHH
T ss_pred cCCCEEEEeccccccccccccccHHHHHHHHHHHHHHhcCCCCeEEEEeCccccHHHHHHHHHHhcccccccccCHHHHH
Confidence 3699999999985333 1222 3455555678899999997655455566778899999999999999999
Q ss_pred HHHHHcC
Q 022475 180 TFAKVHG 186 (296)
Q Consensus 180 ~l~~~~~ 186 (296)
.+....+
T Consensus 315 ~l~~~lg 321 (474)
T 3drw_A 315 QILSVLG 321 (474)
T ss_dssp HHHHHHT
T ss_pred HHHHHhc
Confidence 9987643
No 69
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=98.47 E-value=3.1e-06 Score=77.45 Aligned_cols=162 Identities=11% Similarity=0.067 Sum_probs=103.6
Q ss_pred hhhhhhhc-ceEEEEeccccccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhhcC--CCcEEEcCHHHHHHH
Q 022475 105 EIWSIVEK-AKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP--YMDYVFGNETEARTF 181 (296)
Q Consensus 105 ~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~--~~dv~~~n~~E~~~l 181 (296)
+..+.... ++.++|+.-.+. +.+.+..+.+.+++.++++++|+-.-.......+..+.+++ ..++|++|..|+..|
T Consensus 298 E~~e~~~~~~~alvin~G~l~-~~~~~~~a~~~a~~~~~PvVlDPVg~~a~~~r~~~~~~Ll~~~~~~vItpN~~E~~~L 376 (540)
T 3nl6_A 298 EVNDLAAIPHATLLLNTGSVA-PPEMLKAAIRAYNDVKRPIVFDPVGYSATETRLLLNNKLLTFGQFSCIKGNSSEILGL 376 (540)
T ss_dssp HHHHHTTSTTCEEEEESSCSC-CHHHHHHHHHHHHTTTCCEEEECTTCTTSHHHHHHHHHHTTSCCCSEEEECHHHHHHH
T ss_pred HHHHHHhccCCeEEEeCCCCC-HHHHHHHHHHHHHHcCCCEEEChHHhhcccccHHHHHHHHhhCCCeEECCCHHHHHHH
Confidence 45555666 899999753332 25677777788888999999999543322223344566776 689999999999999
Q ss_pred HHHcC-----CC------CCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEEC-------------------CeEE
Q 022475 182 AKVHG-----WE------TDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAED-------------------GKVK 231 (296)
Q Consensus 182 ~~~~~-----~~------~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~-------------------~~~~ 231 (296)
.+... .+ .++..++++.+. ...+ ..|++| |..-. +.++ +..+
T Consensus 377 ~g~~~~~~~GVds~~~~~~~d~~~aA~~lA-----~~~~-~vVvlk-G~~D~-I~dg~~~~~~~~~~~~~~~~~~~~~~~ 448 (540)
T 3nl6_A 377 AELNKERMKGVDASSGISNELLIQATKIVA-----FKYK-TVAVCT-GEFDF-IADGTIEGKYSLSKGTNGTSVEDIPCV 448 (540)
T ss_dssp TTC--------------CCHHHHHHHHHHH-----HHTT-SEEEEC-SSSEE-EEECCGGGBCCSSSCCSSCCTTSSCEE
T ss_pred hCCCcccccccccccccCHHHHHHHHHHHH-----HHhC-CEEEEc-CCCeE-EECCCccccccccccccccccCCccEE
Confidence 87431 11 134445666664 2233 345554 54433 3355 4556
Q ss_pred EEecccCCCccccCCCCCchhhhHHHHHHHhcCC---CHHHHHHHhhHH
Q 022475 232 LFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEK---PVEDCVRTGCYA 277 (296)
Q Consensus 232 ~~~~~~~~~~~vvd~tGaGDaf~ag~~~~l~~~~---~~~~a~~~A~~~ 277 (296)
.++.-..+ -.-.++|.||++.+.+.+.+..+. ++.+|+..|...
T Consensus 449 ~~~~G~~~--~m~~vtGtGc~Lsg~Iaa~la~~~~~~~~~~Aa~~a~~~ 495 (540)
T 3nl6_A 449 AVEAGPIE--IMGDITASGCSLGSTIACMIGGQPSEGNLFHAVVAGVML 495 (540)
T ss_dssp EEECSCCG--GGGSSTTHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHH
T ss_pred EECCCChh--hccCccCchHHHHHHHHHHHhcCcCCCCHHHHHHHHHHH
Confidence 55432201 234579999999999999998887 688887776654
No 70
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=98.41 E-value=5.6e-06 Score=73.75 Aligned_cols=163 Identities=11% Similarity=0.014 Sum_probs=90.6
Q ss_pred ecCChhHHHHHHHHHhhcCCCcEEE--EEeecCCchhHHHHHHHHhcCCceeEEe------------cCCCCcee-EEEE
Q 022475 14 IAGGATQNSIKVAQWMLQIPGATSY--IGCIGKDKFGEEMKKNSTAAGVNVKYYE------------DESAPTGT-CAVC 78 (296)
Q Consensus 14 ~~GG~~~n~a~~~~~l~~lg~~v~~--~~~vG~D~~g~~i~~~l~~~gi~~~~~~------------~~~~~t~~-~~~~ 78 (296)
..||.+..+|..++. +|.++.+ ++.+|. .+.+.|...+|..--+. ....+... .+..
T Consensus 109 ~~GGnA~imAn~la~---lg~~~vl~~~~~l~~-----~~~~lf~~~~i~~p~~~~~~~~l~~~~e~~~~~~~~iH~I~E 180 (455)
T 1ua4_A 109 RMGGQAGIMANLLGG---VYGVPVIVHVPQLSR-----LQANLFLDGPIYVPTLENGEVKLIHPKEFSGDEENCIHYIYE 180 (455)
T ss_dssp EEESHHHHHHHHHTT---TTCCCEEECCSCCCH-----HHHTTSCSSSEEEEEEETTEEEEECGGGCSCCCCCCEEEEEE
T ss_pred ccCCcHHHHHHHHHH---cCCCEEEEeCCCCCH-----HHHHhcCCCCeEeecccCCccccccchhhccCCCCCceEEEE
Confidence 899988887777664 5688877 666554 34444432344331111 01222333 3333
Q ss_pred EeCCeece-eecccccc-----ccCccccCC-hhhhhhhhc----ceEEEEeccccccCh---HHHHHHHH---HHhhCC
Q 022475 79 VVGGERSL-VANLSAAN-----CYKSEHLKR-PEIWSIVEK----AKYYYIAGFFLTVSP---ESIQMVAE---HAAAKN 141 (296)
Q Consensus 79 ~~~~~~~~-~~~~~~~~-----~~~~~~~~~-~~~~~~~~~----~~~~~i~g~~~~~~~---~~~~~~~~---~~~~~~ 141 (296)
+.+|++.. +..+.++. ......+.. .++.+.+.+ +|+++++|++..-.. +.....++ .....+
T Consensus 181 f~~G~~~~~~~aPraNRfI~s~D~~n~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~~~~~~~~~~l~~i~~L~~~~ 260 (455)
T 1ua4_A 181 FPRGFRVFEFEAPRENRFIGSADDYNTTLFIREEFRESFSEVIKNVQLAILSGLQALTKENYKEPFEIVKSNLEVLNERE 260 (455)
T ss_dssp ECTTCEETTEECSSCEEEEEECCSSGGGTCCCGGGSTTHHHHGGGCSEEEECCGGGCCTTTCHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCeecceeccccceeEEecCCCcccCcccHHHHHHHHhhccCCcEEEEechhcccccchHHHHHHHHHHHHHhcCCC
Confidence 44565421 11111111 011011111 223344444 999999999853221 33222222 335567
Q ss_pred CEEEEeCCchhhhhhhhHHHHhhcCCCcEEEcCHHHHHHHHHHc
Q 022475 142 KVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVH 185 (296)
Q Consensus 142 ~~~~~d~~~~~~~~~~~~~~~~~l~~~dv~~~n~~E~~~l~~~~ 185 (296)
.++.+++......+.....+ .+++++|.+-+|++|+..+....
T Consensus 261 ~~iH~ElAs~~~~~~~~~i~-~ilp~vDSlGmNE~EL~~l~~~l 303 (455)
T 1ua4_A 261 IPVHLEFAFTPDEKVREEIL-NVLGMFYSVGLNEVELASIMEIL 303 (455)
T ss_dssp CCEEEECCCCCCHHHHHHHH-HHGGGCSEEEECHHHHHHHHHHT
T ss_pred ceEEEEeCCccCHHHHHHHH-hhhccCcccccCHHHHHHHHHHh
Confidence 88999997655444456666 89999999999999999887753
No 71
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=98.40 E-value=4.8e-06 Score=68.93 Aligned_cols=159 Identities=13% Similarity=0.031 Sum_probs=94.0
Q ss_pred hhhhhhcceEEEEeccccccChH---HHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhhc-CCCcEEEcCHHHHHHH
Q 022475 106 IWSIVEKAKYYYIAGFFLTVSPE---SIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKAL-PYMDYVFGNETEARTF 181 (296)
Q Consensus 106 ~~~~~~~~~~~~i~g~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l-~~~dv~~~n~~E~~~l 181 (296)
..+....++.++++--+ .+++ .+....+.+.+.++|+++||..-.....-.+..++++ .+.++|++|..|+..|
T Consensus 50 ~~e~~~~a~al~iNiGt--l~~~~~~~m~~A~~~A~~~~~PvVLDPVg~gas~~R~~~~~~ll~~~~~vIrgN~sEi~~L 127 (265)
T 3hpd_A 50 LEEMIRLADAVVINIGT--LDSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISAL 127 (265)
T ss_dssp HHHHHHHCSEEEEECTT--CCHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHCCSEEEEEHHHHHHH
T ss_pred HHHHHHHCCeEEEECCC--CChHHHHHHHHHHHHHHHcCCCEEEcCCCCCCcHHHHHHHHHHHhcCCcEEcCCHHHHHHH
Confidence 44556778889997422 2443 3445557778899999999854322211122222332 2589999999999999
Q ss_pred HHHcCC---------CCCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecccCCCccccCCCCCchh
Q 022475 182 AKVHGW---------ETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDA 252 (296)
Q Consensus 182 ~~~~~~---------~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvd~tGaGDa 252 (296)
.+.... +.++..++++.+. .+.++ .|++| |+.- ++.++++.+.++.-.. -.-..+|.||+
T Consensus 128 ~g~~~~~~gvds~~~~~~d~~~~a~~lA-----~~~~~-vVvlk-G~~d-~I~dg~~~~~~~~G~~---~m~~vtGtGc~ 196 (265)
T 3hpd_A 128 LGEEGKTRGVDSLEYGEEEAKKLTMNAA-----REFNT-TVAVT-GAVD-YVSDGRRTFAVYNGHE---LLGRVTGTGCM 196 (265)
T ss_dssp HHHHC----------CHHHHHHHHHHHH-----HHTTS-EEEEE-SSSE-EEECSSCEEEECCCCG---GGGGSTTHHHH
T ss_pred hcccCCCCCccCccccHHHHHHHHHHHH-----HHhCC-EEEEe-CCCe-EEEcCCEEEEECCCCh---HhhcCCccchH
Confidence 875421 1234455666664 23333 45554 5443 4446666666543221 23344899999
Q ss_pred hhHHHHHHHhcCCCHHHHHHHhhHHh
Q 022475 253 FVGGFLSQLVQEKPVEDCVRTGCYAA 278 (296)
Q Consensus 253 f~ag~~~~l~~~~~~~~a~~~A~~~a 278 (296)
+.+.+.+.+..+ +..+|...|...-
T Consensus 197 Lsg~iaa~lA~~-~~~~Aa~~a~~~~ 221 (265)
T 3hpd_A 197 VAALTGAFVAVT-EPLKATTSALVTF 221 (265)
T ss_dssp HHHHHHHHHTTS-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcC-ChHHHHHHHHHHH
Confidence 877766666666 5556666555443
No 72
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=98.24 E-value=4.4e-05 Score=68.03 Aligned_cols=163 Identities=12% Similarity=0.026 Sum_probs=90.0
Q ss_pred ecCChhHHHHHHHHHhhcCCCcEEE--EEeecCCchhHHHHHHHHhcCCceeEEec-------------CCCCceeEEEE
Q 022475 14 IAGGATQNSIKVAQWMLQIPGATSY--IGCIGKDKFGEEMKKNSTAAGVNVKYYED-------------ESAPTGTCAVC 78 (296)
Q Consensus 14 ~~GG~~~n~a~~~~~l~~lg~~v~~--~~~vG~D~~g~~i~~~l~~~gi~~~~~~~-------------~~~~t~~~~~~ 78 (296)
..||.+.-+|..++. +|.++.+ ++.+ ++...+.|...+|..--+.. .+..--+.+..
T Consensus 117 ~mGGnAgimAn~la~---lg~~~vl~~~~~~-----s~~~~~l~~~~~i~~p~~~~g~l~~~~~~ea~~~~~~~iH~I~E 188 (467)
T 1gc5_A 117 RIGGQAGIMANLLGG---VYRIPTIVHVPQN-----PKLQAELFVDGPIYVPVFEGNKLKLVHPKDAIAEEEELIHYIYE 188 (467)
T ss_dssp EEESHHHHHHHHHHH---TSCCCEEECCSCC-----CHHHHTTSCSSSEEEEEECSSCEEEECGGGSCCSCCCCEEEEEE
T ss_pred ccCccHHHHHHHHHh---cCCCEEEEcCCCC-----CHHHHHhcCCCCeeeeeccCCceecccchhhccCCCCcceEEEE
Confidence 899998888888776 4577766 4544 44455555434443221100 01112223333
Q ss_pred EeCCeece-eeccccccc------cCccccCChhhhhhhhc----ceEEEEeccccccC---h-----HHHH---HHHHH
Q 022475 79 VVGGERSL-VANLSAANC------YKSEHLKRPEIWSIVEK----AKYYYIAGFFLTVS---P-----ESIQ---MVAEH 136 (296)
Q Consensus 79 ~~~~~~~~-~~~~~~~~~------~~~~~~~~~~~~~~~~~----~~~~~i~g~~~~~~---~-----~~~~---~~~~~ 136 (296)
+..|++.- +..+.++.- .++.-....++.+.+.+ +|+++++|+++.-. + +.+. +.++.
T Consensus 189 y~~G~~~~~~~aPraNRfI~s~D~~N~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~y~~g~~~~~~l~~~~~~l~~ 268 (467)
T 1gc5_A 189 FPRGFQVFDVQAPRENRFIANADDYNARVYMRREFREGFEEITRNVELAIISGLQVLKEYYPDGTTYKDVLDRVESHLNI 268 (467)
T ss_dssp ECSSCEETTEECSSCEEEEEECCSSTTTTCCCHHHHHSHHHHHTTCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHH
T ss_pred cCCCCeecceeccCCceEEEecCCCCccccccHHHHHHHHhhccCCCEEEEechhcccCccCCchhHHHHHHHHHHHHHh
Confidence 33454321 122222211 11111111334444444 99999999985322 1 2222 23333
Q ss_pred HhhCCCEEEEeCCchhhhhhhhHHHHhhcCCCcEEEcCHHHHHHHHHHc
Q 022475 137 AAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVH 185 (296)
Q Consensus 137 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dv~~~n~~E~~~l~~~~ 185 (296)
....++++-++..+-.........+ .+++++|-+=+|++|+..++...
T Consensus 269 l~~~~~~iH~E~As~~~~~l~~~i~-~ilp~vDSlGmNEqELa~l~~~l 316 (467)
T 1gc5_A 269 LNRYNVKSHFEFAYTANRRVREALV-ELLPKFTSVGLNEVELASIMEII 316 (467)
T ss_dssp HHHTTCEEEEECCCCCCHHHHHHHH-HHGGGCSEEEECHHHHHHHHHHT
T ss_pred hcCCCCeEEEEECCcccHHHHHHHH-hhccccccCccCHHHHHHHHHHc
Confidence 3557789999997655445566667 89999999999999999766543
No 73
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=98.18 E-value=1.4e-05 Score=71.09 Aligned_cols=73 Identities=14% Similarity=-0.019 Sum_probs=52.1
Q ss_pred hcceEEEEeccccccC---hHH---HHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhhcCCCcEEEcCHHHHHHHHHH
Q 022475 111 EKAKYYYIAGFFLTVS---PES---IQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKV 184 (296)
Q Consensus 111 ~~~~~~~i~g~~~~~~---~~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dv~~~n~~E~~~l~~~ 184 (296)
..+|+++++|+++.-. ++. ..+.++.....++++-++..+-.........+ .+++++|-+=+|++|+..++..
T Consensus 227 ~~~d~~vlSG~q~l~~~~~~~~~~~~~~~i~~L~~~~~~iH~E~As~~~~~l~~~i~-~ilp~vDSlGmNEqELa~l~~~ 305 (457)
T 1l2l_A 227 KRSELAIISGLHPLTQENHGKPIKLVREHLKILNDLGIRAHLEFAFTPDEVVRLEIV-KLLKHFYSVGLNEVELASVVSV 305 (457)
T ss_dssp TTCSEEEEECCTTCCTTTCHHHHHHHHHHHHHHHHTTCEEEEECCCCSSHHHHHHHH-HHGGGCSEEEECHHHHHHHHHH
T ss_pred cCCCEEEEeccccccccchhhhHHHHHHHHHHhcCCCCeEEEEECCcccHHHHHHHH-hhccccccCccCHHHHHHHHHH
Confidence 3499999999985433 221 22223333667889999997655445566667 8999999999999999886544
No 74
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=97.85 E-value=0.0001 Score=66.24 Aligned_cols=151 Identities=19% Similarity=0.151 Sum_probs=89.9
Q ss_pred hcceEEEEeccccccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhhcCCCcEEEcCHHHHHHHHHH-----c
Q 022475 111 EKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKV-----H 185 (296)
Q Consensus 111 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dv~~~n~~E~~~l~~~-----~ 185 (296)
.+.|.+++..- +...+..+..+++ .. ++++|-.... . ..+...++...|++||..|+..|++. .
T Consensus 291 ~~~~a~~iGPG-lG~~~~~l~~~l~----~~-p~VlDADaL~-~----~~~~~~~~~~~VlTPh~~E~~rL~g~~~~~v~ 359 (475)
T 3k5w_A 291 NLLSAFALGMG-LENIPKDFNRWLE----LA-PCVLDAGVFY-H----KEILQALEKEAVLTPHPKEFLSLLNLVGINIS 359 (475)
T ss_dssp SSCSEEEECTT-CSSCCTTHHHHHH----HS-CEEEEGGGGG-S----GGGGTTTTSSEEEECCHHHHHHHHHHTSCCCC
T ss_pred cCCCEEEEcCC-CCCCHHHHHHHHh----cC-CEEEECcccC-C----chhhhccCCCEEECCCHHHHHHHhCCccCCCC
Confidence 56788888642 2222221333332 24 8888874322 1 11223345568999999999999986 2
Q ss_pred CCC-CCCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecccCCCccccCCCCCchhhhHHHHHHHhcC
Q 022475 186 GWE-TDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE 264 (296)
Q Consensus 186 ~~~-~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvd~tGaGDaf~ag~~~~l~~~ 264 (296)
..+ .++..++++.+.+ ..+...|++|- ..- ++.++++.+..+. .. .-..+.|.||++++.+...++++
T Consensus 360 ~~~~~~d~~~aa~~la~-----~~g~~~VvlKG-~~~-vI~~~~~~~~~~~-g~---~~mat~GtGdvLsg~Iaa~lA~g 428 (475)
T 3k5w_A 360 MLELLDNKLEIARDFSQ-----KYPKVVLLLKG-ANT-LIAHQGQVFINIL-GS---VALAKAGSGDVLAGLILSLLSQN 428 (475)
T ss_dssp TTSGGGSCC--CHHHHH-----HCTTEEEEECS-SSE-EEEETTEEEEECC-CC---GGGCSTTHHHHHHHHHHHHHHTT
T ss_pred cchhHHHHHHHHHHHHH-----HcCCeEEEEeC-CCC-EEECCCEEEEECC-CC---CCCCCCCHHHHHHHHHHHHHHcC
Confidence 211 1244455555541 22134566653 333 4446665555432 11 34568999999999999999999
Q ss_pred CCHHHHHHHhhHHhhhhhh
Q 022475 265 KPVEDCVRTGCYAANVVIQ 283 (296)
Q Consensus 265 ~~~~~a~~~A~~~aa~~~~ 283 (296)
.++.+|+..|...-+.+-+
T Consensus 429 ~~~~~Aa~~a~~lhg~ag~ 447 (475)
T 3k5w_A 429 YTPLDAAINASLAHALASL 447 (475)
T ss_dssp CCHHHHHHHHHHHHHHGGG
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 9999998887665444433
No 75
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=59.27 E-value=40 Score=23.10 Aligned_cols=67 Identities=21% Similarity=0.163 Sum_probs=44.9
Q ss_pred hhhhhhhcceEEEEeccccccChHHHHHHHHHHhhCCCEE--EEeCCchhhhhhhhHHHHhhcC-CCcEEEcCHHH
Q 022475 105 EIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVF--MMNLSAPFICEFFREPQEKALP-YMDYVFGNETE 177 (296)
Q Consensus 105 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~~~l~-~~dv~~~n~~E 177 (296)
++|+....-|++++-. .-..+++..+++.++++|+-+ ++|-... +..++..+++-+ -+|+-.++..|
T Consensus 70 eiwerypqldvvvivt---tddkewikdfieeakergvevfvvynnkdd---drrkeaqqefrsdgvdvrtvsdke 139 (162)
T 2l82_A 70 EIWERYPQLDVVVIVT---TDDKEWIKDFIEEAKERGVEVFVVYNNKDD---DRRKEAQQEFRSDGVDVRTVSDKE 139 (162)
T ss_dssp HHHHHCTTCCEEEEEE---CCCHHHHHHHHHHHHHTTCEEEEEEECSCH---HHHHHHHHHHCCSSCEEEEESSHH
T ss_pred HHHHhCCCCcEEEEEe---cCcHHHHHHHHHHHHhcCcEEEEEecCCCc---hhHHHHHHHhhhcCceeeecCCHH
Confidence 4666677788888752 335689999999999999864 4444322 223455556665 47888876554
No 76
>2orv_A Thymidine kinase; TP4A (P1-(5'-adenosyl)P4-(5'- (2'deoxythymidil))tetraphosphate, transferase; HET: 4TA; 2.30A {Homo sapiens} SCOP: c.37.1.24 g.39.1.14
Probab=48.84 E-value=1e+02 Score=24.56 Aligned_cols=62 Identities=11% Similarity=-0.081 Sum_probs=41.3
Q ss_pred hhhhcceEEEEeccccccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhhcCCCcEEE
Q 022475 108 SIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVF 172 (296)
Q Consensus 108 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dv~~ 172 (296)
+.+.+.|+|.++=.+... + +.++++.+...|++|++--..........+....+++.+|.+.
T Consensus 86 ~~~~~~dvViIDEaQF~~--~-v~el~~~l~~~gi~VI~~GL~~DF~~~~F~~~~~Ll~~AD~Vt 147 (234)
T 2orv_A 86 QEALGVAVIGIDEGQFFP--D-IVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVV 147 (234)
T ss_dssp HHHTTCSEEEESSGGGCT--T-HHHHHHHHHHTTCEEEEECCSBCTTSSBCTTGGGGGGGCSEEE
T ss_pred HHhccCCEEEEEchhhhh--h-HHHHHHHHHhCCCEEEEEecccccccCCcccHHHHHHhcccEE
Confidence 345678999998655432 3 7788888888999877654332222223344667888898886
No 77
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=45.93 E-value=69 Score=21.91 Aligned_cols=52 Identities=15% Similarity=0.068 Sum_probs=36.4
Q ss_pred cChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhhcCC-CcEEEcCHHH
Q 022475 125 VSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPY-MDYVFGNETE 177 (296)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~-~dv~~~n~~E 177 (296)
..|+.+.++.+..+++|+++++-++... ....++.++++-+. +|+-.+-..|
T Consensus 10 sdpeilkeivreikrqgvrvvllysdqd-ekrrrerleefekqgvdvrtvedke 62 (162)
T 2l82_A 10 SDPEILKEIVREIKRQGVRVVLLYSDQD-EKRRRERLEEFEKQGVDVRTVEDKE 62 (162)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEEECCSC-HHHHHHHHHHHHTTTCEEEECCSHH
T ss_pred CCHHHHHHHHHHHHhCCeEEEEEecCch-HHHHHHHHHHHHHcCCceeeeccHH
Confidence 3789999999999999999877665432 22345567777664 7888764443
No 78
>2fcj_A Small toprim domain protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: MES; 1.30A {Geobacillus stearothermophilus} SCOP: c.136.1.1 PDB: 2i5r_A*
Probab=43.97 E-value=49 Score=23.26 Aligned_cols=77 Identities=9% Similarity=0.107 Sum_probs=52.6
Q ss_pred cceEEEEeccccccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhhcCCCcEEEcCHHHHHHHHHHcCCCCCC
Q 022475 112 KAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDN 191 (296)
Q Consensus 112 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dv~~~n~~E~~~l~~~~~~~~~~ 191 (296)
..+++..+|+ ++.+.+..+.+..+.+++.+..|+.... +..+..+.+.++.+...++...+. +...-+
T Consensus 26 ~~~iI~t~Gs---i~~~~l~~I~~~~~~r~VIi~TD~D~~G--ekIRk~i~~~lp~~~hafi~r~~~-------gVE~a~ 93 (119)
T 2fcj_A 26 PVVIVCTNGT---ISDARLEELADELEGYDVYLLADADEAG--EKLRRQFRRMFPEAEHLYIDRAYR-------EVAAAP 93 (119)
T ss_dssp CCEEEECCSC---CCHHHHHHHHHHTTTSEEEEECCSSHHH--HHHHHHHHHHCTTSEEECCCTTTC-------STTTSC
T ss_pred CCCEEEeCCc---cCHHHHHHHHHHhcCCCEEEEECCCccH--HHHHHHHHHHCCCCcEEeccCCcc-------CcccCC
Confidence 6788888874 5777888888887778888888874332 234455667888888888776653 333445
Q ss_pred HHHHHHHHh
Q 022475 192 VEEIALKIS 200 (296)
Q Consensus 192 ~~~~~~~l~ 200 (296)
++.+.+.|.
T Consensus 94 ~~~I~~aL~ 102 (119)
T 2fcj_A 94 IWHLAQVLL 102 (119)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666666664
No 79
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=42.21 E-value=36 Score=25.39 Aligned_cols=65 Identities=11% Similarity=0.068 Sum_probs=39.8
Q ss_pred eEEEEeccccccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhhcCCCcEEEc-----CHHHHHHHH
Q 022475 114 KYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFG-----NETEARTFA 182 (296)
Q Consensus 114 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dv~~~-----n~~E~~~l~ 182 (296)
+.+.++|--+.+.++.+.++++.+++.|..+.+...... ..+.++.+++..|.+.+ +.+....+.
T Consensus 5 ~~v~~tGGEPll~~~~~~~l~~~~~~~g~~~~l~TNG~l----~~~~~~~l~~~~d~v~isld~~~~~~~~~~~ 74 (182)
T 3can_A 5 GGVTFCGGEPLLHPEFLIDILKRCGQQGIHRAVDTTLLA----RKETVDEVMRNCELLLIDLKSMDSTVHQTFC 74 (182)
T ss_dssp CCEEECSSTGGGSHHHHHHHHHHHHHTTCCEEEECTTCC----CHHHHHHHHHTCSEEEEECCCSCHHHHHHHH
T ss_pred CEEEEEcccccCCHHHHHHHHHHHHHCCCcEEEECCCCC----CHHHHHHHHhhCCEEEEECCCCCHHHHHHHh
Confidence 456676633555677778899999998988777764432 12334455555676553 344444444
No 80
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=42.02 E-value=60 Score=25.74 Aligned_cols=51 Identities=16% Similarity=0.125 Sum_probs=39.4
Q ss_pred hcceEEEEeccccccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhhcCCCcEEE
Q 022475 111 EKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVF 172 (296)
Q Consensus 111 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dv~~ 172 (296)
..+|.+.++| +.++..+.+.++++..++...|+++-++.+. .+.+.+|.++
T Consensus 30 ~GtD~i~vGG-s~gvt~~~~~~~v~~ik~~~~Pvvlfp~~~~----------~v~~gaD~~l 80 (228)
T 3vzx_A 30 SGTDAVIIGG-SDGVTEDNVLRMMSKVRRFLVPCVLEVSAIE----------AIVPGFDLYF 80 (228)
T ss_dssp SSCSEEEECC-CSCCCHHHHHHHHHHHTTSSSCEEEECSCGG----------GCCSCCSEEE
T ss_pred cCCCEEEECC-cCCCCHHHHHHHHHHhhccCCCEEEeCCCHH----------HccccCCEEE
Confidence 4589999988 4456778888999999888889999887643 3567787775
No 81
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A*
Probab=38.52 E-value=1.4e+02 Score=23.30 Aligned_cols=59 Identities=7% Similarity=-0.056 Sum_probs=34.5
Q ss_pred cceEEEEeccccccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhhcCCCcEEE
Q 022475 112 KAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVF 172 (296)
Q Consensus 112 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dv~~ 172 (296)
+.|+|+|+=.+. .+++.+ +.++.+...+++|++--..........+....+++.+|.+.
T Consensus 101 ~~dvViIDEaQF-~~~~~V-~~l~~l~~~~~~Vi~~Gl~~DF~~~~F~~~~~Ll~~AD~Vt 159 (214)
T 2j9r_A 101 EMDVIAIDEVQF-FDGDIV-EVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVT 159 (214)
T ss_dssp SCCEEEECCGGG-SCTTHH-HHHHHHHHTTCEEEEEECSBCTTSCBCTTHHHHHHHCSEEE
T ss_pred CCCEEEEECccc-CCHHHH-HHHHHHhhCCCEEEEEecccccccCccccHHHHHHhcccEE
Confidence 489999985443 455666 55665555688876543222222222344566777788776
No 82
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=37.91 E-value=68 Score=26.12 Aligned_cols=60 Identities=17% Similarity=0.154 Sum_probs=40.9
Q ss_pred hhhhcceEEEEeccccccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhhcCCCcEEE-cC
Q 022475 108 SIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVF-GN 174 (296)
Q Consensus 108 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dv~~-~n 174 (296)
+.+.++|+++- ..+|+.....++.+.++|++++.-. ..|.+...+.++.+.+...++. +|
T Consensus 69 ~ll~~~DVVID-----fT~p~a~~~~~~~al~~G~~vVigT--TG~s~~~~~~L~~aa~~~~vv~a~N 129 (272)
T 4f3y_A 69 RVCAEADYLID-----FTLPEGTLVHLDAALRHDVKLVIGT--TGFSEPQKAQLRAAGEKIALVFSAN 129 (272)
T ss_dssp HHHHHCSEEEE-----CSCHHHHHHHHHHHHHHTCEEEECC--CCCCHHHHHHHHHHTTTSEEEECSC
T ss_pred HHhcCCCEEEE-----cCCHHHHHHHHHHHHHcCCCEEEEC--CCCCHHHHHHHHHHhccCCEEEECC
Confidence 34567898765 2367888888888999999877633 2244444556777777777776 66
No 83
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=35.18 E-value=95 Score=26.81 Aligned_cols=38 Identities=8% Similarity=0.232 Sum_probs=24.4
Q ss_pred cceEEEEeccc-cccChHHHHHHHHHHhh--CCCEEEEeCC
Q 022475 112 KAKYYYIAGFF-LTVSPESIQMVAEHAAA--KNKVFMMNLS 149 (296)
Q Consensus 112 ~~~~~~i~g~~-~~~~~~~~~~~~~~~~~--~~~~~~~d~~ 149 (296)
+.++|++...+ .......+.++.+.|++ .|+.+++|-.
T Consensus 167 ~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a 207 (415)
T 2fq6_A 167 NTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNT 207 (415)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECT
T ss_pred CCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECC
Confidence 45778876533 11111235778888888 8999888863
No 84
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=31.96 E-value=45 Score=26.44 Aligned_cols=53 Identities=9% Similarity=0.115 Sum_probs=35.7
Q ss_pred hcceEEEEeccccccChHHHHHHHHHHhhCCCE--EEEeCCchhhhhhhhHHHHhhcCCCcEEE
Q 022475 111 EKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKV--FMMNLSAPFICEFFREPQEKALPYMDYVF 172 (296)
Q Consensus 111 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~~~~~~l~~~dv~~ 172 (296)
..+|++.+..... . ..+...++.+++.|++ +.+++..+. +.++.+++.+|++.
T Consensus 79 aGAd~itvh~Ea~--~-~~~~~~i~~i~~~G~k~gv~lnp~tp~------~~~~~~l~~~D~Vl 133 (231)
T 3ctl_A 79 AGADFITLHPETI--N-GQAFRLIDEIRRHDMKVGLILNPETPV------EAMKYYIHKADKIT 133 (231)
T ss_dssp HTCSEEEECGGGC--T-TTHHHHHHHHHHTTCEEEEEECTTCCG------GGGTTTGGGCSEEE
T ss_pred cCCCEEEECcccC--C-ccHHHHHHHHHHcCCeEEEEEECCCcH------HHHHHHHhcCCEEE
Confidence 4579998875321 2 2457888899999987 455555432 44666777889886
No 85
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=31.23 E-value=34 Score=27.53 Aligned_cols=52 Identities=12% Similarity=-0.020 Sum_probs=35.2
Q ss_pred hcceEEEEeccccccChHHHHHHHHHHhhCCCE--EEEeCCchhhhhhhhHHHHhhcCCCcEEE
Q 022475 111 EKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKV--FMMNLSAPFICEFFREPQEKALPYMDYVF 172 (296)
Q Consensus 111 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~~~~~~l~~~dv~~ 172 (296)
..+|++.+..... +.+...++.+++.|++ +.+++..+. +.++.+++..|++.
T Consensus 108 aGAd~itvH~Ea~----~~~~~~i~~ir~~G~k~Gvalnp~Tp~------e~l~~~l~~vD~Vl 161 (246)
T 3inp_A 108 AGATSIVFHPEAS----EHIDRSLQLIKSFGIQAGLALNPATGI------DCLKYVESNIDRVL 161 (246)
T ss_dssp HTCSEEEECGGGC----SCHHHHHHHHHTTTSEEEEEECTTCCS------GGGTTTGGGCSEEE
T ss_pred cCCCEEEEccccc----hhHHHHHHHHHHcCCeEEEEecCCCCH------HHHHHHHhcCCEEE
Confidence 4689999975322 3456778888999987 566665443 44667777788875
No 86
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=30.89 E-value=1.2e+02 Score=26.03 Aligned_cols=38 Identities=13% Similarity=0.069 Sum_probs=25.1
Q ss_pred cceEEEEeccc-cccChHHHHHHHHHHhhCCCEEEEeCC
Q 022475 112 KAKYYYIAGFF-LTVSPESIQMVAEHAAAKNKVFMMNLS 149 (296)
Q Consensus 112 ~~~~~~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~ 149 (296)
+.+++++...+ .......+..+.+.|+++|+.+++|-.
T Consensus 152 ~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~ 190 (400)
T 3nmy_A 152 DTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNT 190 (400)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECC
Confidence 46788876543 111111267888889999999888853
No 87
>1ztd_A Hypothetical protein PFU-631545-001; structural genomics, southeast collaboratory for structural genomics, secsg; 2.00A {Pyrococcus furiosus} SCOP: a.149.1.2
Probab=30.21 E-value=41 Score=23.12 Aligned_cols=31 Identities=16% Similarity=0.115 Sum_probs=27.2
Q ss_pred ccCCCCCchhhhHHHHHHHhcC-CCHHHHHHH
Q 022475 243 LVDTNGAGDAFVGGFLSQLVQE-KPVEDCVRT 273 (296)
Q Consensus 243 vvd~tGaGDaf~ag~~~~l~~~-~~~~~a~~~ 273 (296)
-.|-.|-||..-|-++|+.+.| .+.+||+..
T Consensus 63 R~DKh~kGd~aEA~iAyAWleG~is~eEavei 94 (133)
T 1ztd_A 63 RVDKHAKGDYAEALIAKAWLMGLISEREAVEI 94 (133)
T ss_dssp GGGTTCHHHHHHHHHHHHHHTTSSCHHHHHHH
T ss_pred cccccCccHHHHHHHHHHHHhccccHHHHHHH
Confidence 3677899999999999999998 789998865
No 88
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=30.10 E-value=1.3e+02 Score=26.06 Aligned_cols=38 Identities=13% Similarity=0.066 Sum_probs=27.7
Q ss_pred cceEEEEec----c-ccccChHHHHHHHHHHhh--CCCEEEEeCC
Q 022475 112 KAKYYYIAG----F-FLTVSPESIQMVAEHAAA--KNKVFMMNLS 149 (296)
Q Consensus 112 ~~~~~~i~g----~-~~~~~~~~~~~~~~~~~~--~~~~~~~d~~ 149 (296)
+.+++++.. . +.......+.++.+.+++ +++.+++|-.
T Consensus 159 ~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a 203 (409)
T 3jzl_A 159 KTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNC 203 (409)
T ss_dssp TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECT
T ss_pred CCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCC
Confidence 568888875 2 233344667889999999 8999988853
No 89
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=29.00 E-value=1.1e+02 Score=26.28 Aligned_cols=38 Identities=16% Similarity=0.038 Sum_probs=25.2
Q ss_pred cceEEEEeccc-cccChHHHHHHHHHHhhCCCEEEEeCC
Q 022475 112 KAKYYYIAGFF-LTVSPESIQMVAEHAAAKNKVFMMNLS 149 (296)
Q Consensus 112 ~~~~~~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~ 149 (296)
+.++++++..+ +......+..+.+.|++.|+.+++|-.
T Consensus 166 ~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~ 204 (414)
T 3ndn_A 166 PTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNV 204 (414)
T ss_dssp CCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECT
T ss_pred CCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECC
Confidence 46788876543 211123367788888999999888853
No 90
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=28.79 E-value=1.2e+02 Score=24.18 Aligned_cols=51 Identities=14% Similarity=0.230 Sum_probs=38.3
Q ss_pred hcceEEEEeccccccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhhcCCCcEEE
Q 022475 111 EKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVF 172 (296)
Q Consensus 111 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dv~~ 172 (296)
..+|.+.++| +.++..+.+.++++..++...|+++-+..+. .+.+.+|.++
T Consensus 35 ~GtDaI~vGg-s~gvt~~~~~~~v~~ik~~~~Piil~p~~~~----------~~~~gaD~il 85 (235)
T 3w01_A 35 SQTDAIMIGG-TDDVTEDNVIHLMSKIRRYPLPLVLEISNIE----------SVMPGFDFYF 85 (235)
T ss_dssp SSCSEEEECC-SSCCCHHHHHHHHHHHTTSCSCEEEECCCST----------TCCTTCSEEE
T ss_pred cCCCEEEECC-cCCcCHHHHHHHHHHhcCcCCCEEEecCCHH----------HhhcCCCEEE
Confidence 4589999987 4456788888999989888889888886542 3456777665
No 91
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=28.18 E-value=1e+02 Score=24.24 Aligned_cols=52 Identities=10% Similarity=0.002 Sum_probs=33.6
Q ss_pred cceEEEEeccccccChHHHHHHHH---HHhhCCCEE--EEeCCchhhhhhhhHHHHhhcC--CCcEEE
Q 022475 112 KAKYYYIAGFFLTVSPESIQMVAE---HAAAKNKVF--MMNLSAPFICEFFREPQEKALP--YMDYVF 172 (296)
Q Consensus 112 ~~~~~~i~g~~~~~~~~~~~~~~~---~~~~~~~~~--~~d~~~~~~~~~~~~~~~~~l~--~~dv~~ 172 (296)
++|++.+..... .+.+...++ .+++.|.++ .+++..+. +.++++++ .+|++.
T Consensus 85 ~Ad~itvH~ea~---~~~~~~~i~~~~~i~~~G~k~gvalnp~tp~------~~~~~~l~~g~~D~Vl 143 (227)
T 1tqx_A 85 TSNQLTFHFEAL---NEDTERCIQLAKEIRDNNLWCGISIKPKTDV------QKLVPILDTNLINTVL 143 (227)
T ss_dssp TSSEEEEEGGGG---TTCHHHHHHHHHHHHTTTCEEEEEECTTSCG------GGGHHHHTTTCCSEEE
T ss_pred hCCEEEEeecCC---ccCHHHHHHHHHHHHHcCCeEEEEeCCCCcH------HHHHHHhhcCCcCEEE
Confidence 389988865332 213445666 889999874 55554432 45677788 789884
No 92
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=27.10 E-value=1.3e+02 Score=26.12 Aligned_cols=37 Identities=8% Similarity=0.188 Sum_probs=24.1
Q ss_pred cceEEEEeccc-cccChHHHHHHHHHHhhCCCEEEEeC
Q 022475 112 KAKYYYIAGFF-LTVSPESIQMVAEHAAAKNKVFMMNL 148 (296)
Q Consensus 112 ~~~~~~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~d~ 148 (296)
+.++++++..+ +......+.++.+.|+++|+.+++|-
T Consensus 167 ~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~ 204 (430)
T 3ri6_A 167 TTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDT 204 (430)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEEC
T ss_pred CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEEC
Confidence 46778876532 11111235678888888999888885
No 93
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=26.90 E-value=1.5e+02 Score=24.31 Aligned_cols=60 Identities=17% Similarity=0.148 Sum_probs=39.6
Q ss_pred hhhhcceEEEEeccccccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhhcCCCcEEE-cC
Q 022475 108 SIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVF-GN 174 (296)
Q Consensus 108 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dv~~-~n 174 (296)
+.+.++|+++- ...|+.....++.+.++|++++.-.-. |.+...+.++.+.+...++. +|
T Consensus 84 ~ll~~aDVvID-----FT~p~a~~~~~~~~l~~Gv~vViGTTG--~~~e~~~~L~~aa~~~~~~~a~N 144 (288)
T 3ijp_A 84 SAFSNTEGILD-----FSQPQASVLYANYAAQKSLIHIIGTTG--FSKTEEAQIADFAKYTTIVKSGN 144 (288)
T ss_dssp HHTTSCSEEEE-----CSCHHHHHHHHHHHHHHTCEEEECCCC--CCHHHHHHHHHHHTTSEEEECSC
T ss_pred HHhcCCCEEEE-----cCCHHHHHHHHHHHHHcCCCEEEECCC--CCHHHHHHHHHHhCcCCEEEECC
Confidence 34567888753 236777778888888899987764322 44434455777777777776 66
No 94
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=25.90 E-value=62 Score=25.54 Aligned_cols=52 Identities=10% Similarity=-0.011 Sum_probs=34.0
Q ss_pred hcceEEEEeccccccChHHHHHHHHHHhhCCCE--EEEeCCchhhhhhhhHHHHhhcCCCcEEE
Q 022475 111 EKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKV--FMMNLSAPFICEFFREPQEKALPYMDYVF 172 (296)
Q Consensus 111 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~~~~~~l~~~dv~~ 172 (296)
..+|++.+..... +.+...++.+++.|++ +.+++..+. +.++.+++.+|++.
T Consensus 86 aGad~itvH~Ea~----~~~~~~i~~i~~~G~k~gval~p~t~~------e~l~~~l~~~D~Vl 139 (228)
T 3ovp_A 86 AGANQYTFHLEAT----ENPGALIKDIRENGMKVGLAIKPGTSV------EYLAPWANQIDMAL 139 (228)
T ss_dssp HTCSEEEEEGGGC----SCHHHHHHHHHHTTCEEEEEECTTSCG------GGTGGGGGGCSEEE
T ss_pred cCCCEEEEccCCc----hhHHHHHHHHHHcCCCEEEEEcCCCCH------HHHHHHhccCCeEE
Confidence 4689999975321 2456777888888987 455554443 44556777788775
No 95
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=25.89 E-value=78 Score=23.37 Aligned_cols=33 Identities=15% Similarity=0.153 Sum_probs=23.4
Q ss_pred cEEEEEeec---CCchhHHHHHHHHhcCCceeEEec
Q 022475 35 ATSYIGCIG---KDKFGEEMKKNSTAAGVNVKYYED 67 (296)
Q Consensus 35 ~v~~~~~vG---~D~~g~~i~~~l~~~gi~~~~~~~ 67 (296)
+...++..| .-.+...+.+.|.++||+.+.+..
T Consensus 24 ~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~ 59 (167)
T 2re1_A 24 NQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQ 59 (167)
T ss_dssp CCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEE
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEc
Confidence 445555543 334557789999999999998853
No 96
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=25.84 E-value=1.4e+02 Score=24.18 Aligned_cols=58 Identities=14% Similarity=0.182 Sum_probs=39.1
Q ss_pred hhhcceEEE-EeccccccChHHHHHHHHHHhhCCCEEEEeCCchhhhhhhhHHHHhhcCCCcEEE-cC
Q 022475 109 IVEKAKYYY-IAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVF-GN 174 (296)
Q Consensus 109 ~~~~~~~~~-i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dv~~-~n 174 (296)
.+.++|+++ ++ .|+.....++.+.++|++++.--.. +.....+.+..+.+...+++ +|
T Consensus 69 ~l~~~DvVIDft------~p~~~~~~~~~a~~~G~~vVigTtG--~~~e~~~~L~~~a~~~~vv~a~N 128 (273)
T 1dih_A 69 VKDDFDVFIDFT------RPEGTLNHLAFCRQHGKGMVIGTTG--FDEAGKQAIRDAAADIAIVFAAN 128 (273)
T ss_dssp TTTSCSEEEECS------CHHHHHHHHHHHHHTTCEEEECCCC--CCHHHHHHHHHHTTTSCEEECSC
T ss_pred HhcCCCEEEEcC------ChHHHHHHHHHHHhCCCCEEEECCC--CCHHHHHHHHHhcCCCCEEEEec
Confidence 345789887 43 6778888899999999998774322 32333455666667777776 55
No 97
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=25.66 E-value=3.6e+02 Score=24.08 Aligned_cols=112 Identities=9% Similarity=-0.062 Sum_probs=61.0
Q ss_pred ceeecCChhHHHHHHHHHhhc--CCCcEEEEEeecCCchhHHHHHHHHhcCCceeEEecCCCCceeEEEEEeCCeeceee
Q 022475 11 VEYIAGGATQNSIKVAQWMLQ--IPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVA 88 (296)
Q Consensus 11 ~~~~~GG~~~n~a~~~~~l~~--lg~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~~~~~~~~ 88 (296)
.-..+|.++.+.|..++.+-. .|.+..++. ++ .-..+.+.+.-.|+...++.. .+++..
T Consensus 137 ~flVnGsTgg~lamilaa~r~~rpg~d~VIvp---Rn-~HKSv~kAliL~Gl~Pv~V~p----------~~d~~~----- 197 (501)
T 3hl2_A 137 CFVVPMATGMSLTLCFLTLRHKRPKAKYIIWP---RI-DQKSCFKSMITAGFEPVVIEN----------VLEGDE----- 197 (501)
T ss_dssp EEEESSCHHHHHHHHHHHHHHHCTTCCEEEEE---CC-CCHHHHHHHHHTTCEEEEECE----------EEETTE-----
T ss_pred EEEECcHHHHHHHHHHHHcCcccCCCCEEEEe---cc-hHHHHHHHHHHcCCeEEEEee----------eecccc-----
Confidence 445688888888877775321 133555553 44 455667788888888887731 111111
Q ss_pred ccccccccCccccCChhhhhhhh-cceEEEEeccc--cccChHHHHHHHHHHhhCCCEEEEeC
Q 022475 89 NLSAANCYKSEHLKRPEIWSIVE-KAKYYYIAGFF--LTVSPESIQMVAEHAAAKNKVFMMNL 148 (296)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~g~~--~~~~~~~~~~~~~~~~~~~~~~~~d~ 148 (296)
..++++.++. ..+... +.-.+++.... .....+-+.++.+.|++.|+++.+|-
T Consensus 198 -----~~id~e~le~--aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDe 253 (501)
T 3hl2_A 198 -----LRTDLKAVEA--KVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNN 253 (501)
T ss_dssp -----EEECHHHHHH--HHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEEC
T ss_pred -----cCCCHHHHHH--HHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeC
Confidence 1233343332 111111 22222222111 12234567889999999999999995
No 98
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=24.81 E-value=2.3e+02 Score=22.74 Aligned_cols=60 Identities=10% Similarity=-0.059 Sum_probs=35.4
Q ss_pred hcceEEEEeccccccC-hHHHHHHHHHHhhC-CCEEEEeCCchhhhhhhhHHHHhhcCCCcEEE-cC
Q 022475 111 EKAKYYYIAGFFLTVS-PESIQMVAEHAAAK-NKVFMMNLSAPFICEFFREPQEKALPYMDYVF-GN 174 (296)
Q Consensus 111 ~~~~~~~i~g~~~~~~-~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~l~~~dv~~-~n 174 (296)
..+|++-+++-....+ .+.+..++...++. ++++++|...+.. .+.-.+.++-++++- +|
T Consensus 37 ~GAdiIDIg~g~~~v~~~ee~~rvv~~i~~~~~~pisIDT~~~~v----~~aAl~a~~Ga~iINdvs 99 (262)
T 1f6y_A 37 GGARALDLNVGPAVQDKVSAMEWLVEVTQEVSNLTLCLDSTNIKA----IEAGLKKCKNRAMINSTN 99 (262)
T ss_dssp HTCSEEEEBCC----CHHHHHHHHHHHHHTTCCSEEEEECSCHHH----HHHHHHHCSSCEEEEEEC
T ss_pred CCCcEEEECCCCCCCChHHHHHHHHHHHHHhCCCeEEEeCCCHHH----HHHHHhhCCCCCEEEECC
Confidence 5689999987433333 35666677666655 7899999865542 111112234578885 66
No 99
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=24.64 E-value=1.2e+02 Score=25.83 Aligned_cols=37 Identities=11% Similarity=0.109 Sum_probs=24.8
Q ss_pred cceEEEEeccc-cccChHHHHHHHHHHhhCCCEEEEeC
Q 022475 112 KAKYYYIAGFF-LTVSPESIQMVAEHAAAKNKVFMMNL 148 (296)
Q Consensus 112 ~~~~~~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~d~ 148 (296)
+.+++++...+ .......+.++.+.|+++|+.+++|-
T Consensus 151 ~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~ 188 (392)
T 3qhx_A 151 TTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDN 188 (392)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEEC
T ss_pred CCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEEC
Confidence 56778776433 11111236788888999999998885
No 100
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=24.57 E-value=82 Score=23.67 Aligned_cols=35 Identities=9% Similarity=-0.090 Sum_probs=23.0
Q ss_pred HHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHh
Q 022475 21 NSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTA 57 (296)
Q Consensus 21 n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~ 57 (296)
|.....+.|..+|.++...+.+++| -+.|.+.+++
T Consensus 24 N~~~l~~~L~~~G~~v~~~~iv~Dd--~~~I~~~l~~ 58 (172)
T 3kbq_A 24 NAAFIGNFLTYHGYQVRRGFVVMDD--LDEIGWAFRV 58 (172)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECSC--HHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEEEeCCC--HHHHHHHHHH
Confidence 4444444455577999999999988 4455555554
No 101
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=24.31 E-value=14 Score=37.43 Aligned_cols=55 Identities=22% Similarity=0.334 Sum_probs=36.8
Q ss_pred HHHhcCCCCCCCCceEEEEeeCCC----cEEEEECCeEEEEecccCCCccccCCCCCchhhhHHHH
Q 022475 197 LKISQWPKASGTHKRITVITQGAD----PVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFL 258 (296)
Q Consensus 197 ~~l~~~~~~~~~g~~~vvvt~G~~----G~~~~~~~~~~~~~~~~~~~~~vvd~tGaGDaf~ag~~ 258 (296)
+.|.+.|.+.++|+...|+=.|-+ |....++|+. ++-+.++|+||+||..+....
T Consensus 25 ~fl~~~P~ydGrgv~iai~DtGVDP~a~glq~t~dG~~-------~Kiid~~D~tG~GDVdts~v~ 83 (1354)
T 3lxu_X 25 NFLQKYPEYDGRDVTIAIFDSGVDPRATGLETLCDGKT-------VKVIERYDCSGCGDVDMKKKV 83 (1354)
T ss_dssp SSGGGSTTCSSTTCEEEEEESCCCTTSTTSSCCTTSSS-------CSCCEEEETTSTTEEETTEEC
T ss_pred HHHHhCCCCCCCccEEEEEeCCCCCCCCcceecCCCCc-------ceeEEEEeCCCCCccccceEE
Confidence 345556666888888777766544 5555556543 112378999999999987664
No 102
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=22.86 E-value=1.2e+02 Score=19.38 Aligned_cols=35 Identities=17% Similarity=0.044 Sum_probs=24.4
Q ss_pred hcceEEEEeccccccChHHHHHHHHHHhhCCCEEEEeC
Q 022475 111 EKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNL 148 (296)
Q Consensus 111 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 148 (296)
.++.++++.. ..+++....+...|.+.++|+..-.
T Consensus 26 gkaklViiA~---D~~~~~~~~i~~lc~~~~Ip~~~v~ 60 (82)
T 3v7e_A 26 GSVKEVVVAK---DADPILTSSVVSLAEDQGISVSMVE 60 (82)
T ss_dssp TCEEEEEEET---TSCHHHHHHHHHHHHHHTCCEEEES
T ss_pred CCeeEEEEeC---CCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 4577777764 5667777777777887787766554
No 103
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=22.85 E-value=1.8e+02 Score=21.65 Aligned_cols=32 Identities=9% Similarity=0.117 Sum_probs=22.1
Q ss_pred cEEEEEee---cCCchhHHHHHHHHhcCCceeEEe
Q 022475 35 ATSYIGCI---GKDKFGEEMKKNSTAAGVNVKYYE 66 (296)
Q Consensus 35 ~v~~~~~v---G~D~~g~~i~~~l~~~gi~~~~~~ 66 (296)
+...++.. +.-.+...+.+.|.+.||+.+.+.
T Consensus 14 ~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~ 48 (178)
T 2dtj_A 14 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVL 48 (178)
T ss_dssp SEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEE
T ss_pred CEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEE
Confidence 34444443 333455788899999999999874
No 104
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=22.34 E-value=1.8e+02 Score=23.49 Aligned_cols=61 Identities=8% Similarity=-0.032 Sum_probs=37.7
Q ss_pred hcceEEEEecccccc-ChHHHHHHHHHHhhC-CCEEEEeCCchhhhhhhhHHHHhhcCCCcEEE-cCH
Q 022475 111 EKAKYYYIAGFFLTV-SPESIQMVAEHAAAK-NKVFMMNLSAPFICEFFREPQEKALPYMDYVF-GNE 175 (296)
Q Consensus 111 ~~~~~~~i~g~~~~~-~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~l~~~dv~~-~n~ 175 (296)
..+|++-+++..... ..+.+..+++..++. ++++++|...+.. .+.-.+.++-++++- +|.
T Consensus 46 ~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~~~pisIDT~~~~v----~~aal~a~~Ga~iINdvs~ 109 (271)
T 2yci_X 46 KGAHYLDVNTGPTADDPVRVMEWLVKTIQEVVDLPCCLDSTNPDA----IEAGLKVHRGHAMINSTSA 109 (271)
T ss_dssp TTCSEEEEECCSCSSCHHHHHHHHHHHHHHHCCCCEEEECSCHHH----HHHHHHHCCSCCEEEEECS
T ss_pred CCCCEEEEcCCcCchhHHHHHHHHHHHHHHhCCCeEEEeCCCHHH----HHHHHHhCCCCCEEEECCC
Confidence 569999998755322 235566677766654 8899999865542 222222335688886 554
No 105
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=22.27 E-value=94 Score=24.42 Aligned_cols=54 Identities=17% Similarity=0.146 Sum_probs=33.7
Q ss_pred hcceEEEEeccccccChHHHHHHHHHHhhCCCEE--EEeCCchhhhhhhhHHHHhhcCCCcEEE
Q 022475 111 EKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVF--MMNLSAPFICEFFREPQEKALPYMDYVF 172 (296)
Q Consensus 111 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~~~l~~~dv~~ 172 (296)
..+|++++..... ..+.....++.+++.|..+ .+++..+. +.++.+++.+|++.
T Consensus 84 aGadgv~vh~e~~--~~~~~~~~~~~i~~~g~~~gv~~~p~t~~------e~~~~~~~~~D~v~ 139 (230)
T 1tqj_A 84 AGADIISVHVEHN--ASPHLHRTLCQIRELGKKAGAVLNPSTPL------DFLEYVLPVCDLIL 139 (230)
T ss_dssp HTCSEEEEECSTT--TCTTHHHHHHHHHHTTCEEEEEECTTCCG------GGGTTTGGGCSEEE
T ss_pred cCCCEEEECcccc--cchhHHHHHHHHHHcCCcEEEEEeCCCcH------HHHHHHHhcCCEEE
Confidence 4689999874200 2234567788888889874 44544432 34556667788873
No 106
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=21.64 E-value=2.3e+02 Score=23.03 Aligned_cols=58 Identities=10% Similarity=-0.035 Sum_probs=35.7
Q ss_pred ceEEEEeccccccChHHHHHHHHHHhhCCCEEEEeC---CchhhhhhhhHHHHhhcCC-CcEEEc
Q 022475 113 AKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNL---SAPFICEFFREPQEKALPY-MDYVFG 173 (296)
Q Consensus 113 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~---~~~~~~~~~~~~~~~~l~~-~dv~~~ 173 (296)
+|++=+.- ..+.+.+.++++.+++.+.+++.-. ....-.+.+.+.+.+.... +|++++
T Consensus 134 ~dyIDvEl---~~~~~~~~~l~~~a~~~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~GaDIvKi 195 (276)
T 3o1n_A 134 VDMIDLEL---FTGDDEVKATVGYAHQHNVAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIPKI 195 (276)
T ss_dssp CSEEEEEG---GGCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCEEEEEC---cCCHHHHHHHHHHHHhCCCEEEEEeecCCCCcCHHHHHHHHHHHHHcCCCEEEE
Confidence 67877762 4456788888888888888766543 2221123345555555544 688874
No 107
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=21.54 E-value=1.5e+02 Score=22.78 Aligned_cols=31 Identities=13% Similarity=0.212 Sum_probs=23.5
Q ss_pred EEEEeecCCchhHHHHHHHHhcCCceeEEec
Q 022475 37 SYIGCIGKDKFGEEMKKNSTAAGVNVKYYED 67 (296)
Q Consensus 37 ~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~ 67 (296)
.+.+.-+...+...+...|.+.||+.+.+..
T Consensus 39 ti~g~~~~pG~aa~IF~~La~~~InVDmI~Q 69 (200)
T 4go7_X 39 TIVGLPDIPGYAAKVFRAVADADVNIDMVLQ 69 (200)
T ss_dssp EEEEEECSTTHHHHHHHHHHHTTCCCCCEEC
T ss_pred EEecCCCCccHHHHHHHHHHHhCcceEEEee
Confidence 3344444556778899999999999999853
No 108
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=21.39 E-value=1.8e+02 Score=21.82 Aligned_cols=27 Identities=15% Similarity=0.183 Sum_probs=21.3
Q ss_pred EeecCCchhHHHHHHHHhcCCceeEEe
Q 022475 40 GCIGKDKFGEEMKKNSTAAGVNVKYYE 66 (296)
Q Consensus 40 ~~vG~D~~g~~i~~~l~~~gi~~~~~~ 66 (296)
+..+.-.+...+.+.|.+.||+.+.+.
T Consensus 23 ~~~~~~G~~a~If~~La~~~I~vd~I~ 49 (181)
T 3s1t_A 23 GLPDIPGYAAKVFRAVADADVNIDMVL 49 (181)
T ss_dssp EEESSTTHHHHHHHHHHHTTCCCCCEE
T ss_pred cCCCCcCHHHHHHHHHHHcCCcEEEEE
Confidence 434444577889999999999999885
No 109
>1w4r_A Thymidine kinase; type II, human, cytosolic, phosphorylation, transferase; HET: TTP; 1.83A {Homo sapiens} PDB: 1xbt_A* 2wvj_A* 2j87_A*
Probab=21.31 E-value=1.1e+02 Score=23.51 Aligned_cols=63 Identities=16% Similarity=0.065 Sum_probs=36.8
Q ss_pred hhhhhhcceEEEEeccccccChHHHHHHHHHHhhCCCEEEEe-CCchhhhhhhhHHHHhhcCCCcEEE
Q 022475 106 IWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMN-LSAPFICEFFREPQEKALPYMDYVF 172 (296)
Q Consensus 106 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~~~~~l~~~dv~~ 172 (296)
+.+...+.|++.|+-.+.- ++ ..++++.+...|++|++- +...+ .....+....+++.+|-+.
T Consensus 85 ~~~~~~~~DvIlIDEaQFf--k~-~ve~~~~L~~~gk~VI~~GL~~DF-~~~~F~~~~~Ll~~Ad~v~ 148 (195)
T 1w4r_A 85 VAQEALGVAVIGIDEGQFF--PD-IVEFCEAMANAGKTVIVAALDGTF-QRKPFGAILNLVPLAESVV 148 (195)
T ss_dssp GHHHHHTCSEEEESSGGGC--TT-HHHHHHHHHHTTCEEEEEEESBCT-TSSBCTTGGGGGGGCSEEE
T ss_pred HHHhccCCCEEEEEchhhh--HH-HHHHHHHHHHCCCeEEEEeccccc-ccccchhHHHHHHhcCeEE
Confidence 3344667899999987654 44 455556666889886542 22111 1111233556777777665
No 110
>2dha_A FLJ20171 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.18 E-value=2.2e+02 Score=19.64 Aligned_cols=64 Identities=13% Similarity=0.092 Sum_probs=40.9
Q ss_pred ecCChhHHHHHHHHHhhcCCCcEEEEEeecCCchhHHHHHHHHhcCC------ceeEEe-cCCCCceeEEEEEe
Q 022475 14 IAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGV------NVKYYE-DESAPTGTCAVCVV 80 (296)
Q Consensus 14 ~~GG~~~n~a~~~~~l~~lg~~v~~~~~vG~D~~g~~i~~~l~~~gi------~~~~~~-~~~~~t~~~~~~~~ 80 (296)
..||..-.....+.. -...+.+|+.|.-+..-+.|++.++..|. ++..+. ..+.+++.+++.+.
T Consensus 6 ~~~g~~~~~~~~~~~---~~~~~v~V~nLp~~~te~dl~~~F~~~g~v~g~v~~v~i~~d~~gr~~G~aFV~F~ 76 (123)
T 2dha_A 6 SGGGTSNEVAQFLSK---ENQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFA 76 (123)
T ss_dssp SSCCCCHHHHHHHHC---CSCCEEEECSCCTTCCHHHHHHHHHTTSCCTTGGGGEEEEECTTSCEEEEEEECCS
T ss_pred CCCCCchhHHhhccC---CCCCEEEEeCCCCCCCHHHHHHHHHhhCCccCCcceEEEEECCCCCEeeEEEEEEC
Confidence 345544444444332 23578999999988889999999999873 333333 23445677776654
No 111
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=20.09 E-value=3.9e+02 Score=22.42 Aligned_cols=89 Identities=15% Similarity=0.210 Sum_probs=47.6
Q ss_pred EEeec-CCchhHHHHHHHHhcCCc---eeEEecCCCCceeEEEEEeCCeeceeeccccccccCccccCChhhhhhhhcce
Q 022475 39 IGCIG-KDKFGEEMKKNSTAAGVN---VKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAK 114 (296)
Q Consensus 39 ~~~vG-~D~~g~~i~~~l~~~gi~---~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (296)
++.+| +...|..+++.|.++... ..++ .+....|..+.+ .+. .+..+.... +.+.+.|
T Consensus 4 VaIvGatG~vG~el~~lL~~h~fp~~el~~~-~s~~~aG~~~~~--~~~-----------~~~~~~~~~----~~~~~~D 65 (344)
T 3tz6_A 4 IGIVGATGQVGQVMRTLLDERDFPASAVRFF-ASARSQGRKLAF--RGQ-----------EIEVEDAET----ADPSGLD 65 (344)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCCEEEEEEE-ECTTTSSCEEEE--TTE-----------EEEEEETTT----SCCTTCS
T ss_pred EEEECCCChHHHHHHHHHHhCCCCceEEEEE-ECcccCCCceee--cCC-----------ceEEEeCCH----HHhccCC
Confidence 34455 445799999999987433 2222 233344444331 111 111121211 1246789
Q ss_pred EEEEeccccccChHHHHHHHHHHhhCCCEEEEeCCch
Q 022475 115 YYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAP 151 (296)
Q Consensus 115 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 151 (296)
+++++ .+.....+....+.+.|.++ +|.+.+
T Consensus 66 vvf~a-----~~~~~s~~~a~~~~~~G~~v-ID~Sa~ 96 (344)
T 3tz6_A 66 IALFS-----AGSAMSKVQAPRFAAAGVTV-IDNSSA 96 (344)
T ss_dssp EEEEC-----SCHHHHHHHHHHHHHTTCEE-EECSST
T ss_pred EEEEC-----CChHHHHHHHHHHHhCCCEE-EECCCc
Confidence 99885 25566667777777778764 455443
No 112
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=20.04 E-value=1.5e+02 Score=24.30 Aligned_cols=50 Identities=10% Similarity=-0.021 Sum_probs=38.0
Q ss_pred hcceEEEEeccccccC--hHHHHHHHHHHhh-CCCEEEE-eC---CchhhhhhhhHHHHhhcCCCcEEE
Q 022475 111 EKAKYYYIAGFFLTVS--PESIQMVAEHAAA-KNKVFMM-NL---SAPFICEFFREPQEKALPYMDYVF 172 (296)
Q Consensus 111 ~~~~~~~i~g~~~~~~--~~~~~~~~~~~~~-~~~~~~~-d~---~~~~~~~~~~~~~~~~l~~~dv~~ 172 (296)
...|.+.++ +.++. .+.+.++++.+++ ..+++++ .+ +... .+.+.+|.++
T Consensus 65 sGtDai~VG--S~~vt~~~~~~~~~v~~ik~~~~lPvil~fPP~~g~~~----------~i~~~aDa~l 121 (286)
T 3vk5_A 65 LGFAAVLLA--STDYESFESHMEPYVAAVKAATPLPVVLHFPPRPGAGF----------PVVRGADALL 121 (286)
T ss_dssp TTCSCEEEE--CSCCSSHHHHHHHHHHHHHHHCSSCEEEECCCBTTTBS----------CCCTTCSEEE
T ss_pred cCCCEEEEc--cCCCCcchHHHHHHHHHHHHhCCCCEEEECCCCCCCcc----------ccccCCCEEE
Confidence 358999997 55667 7888888988888 7899998 77 4433 4567888876
Done!