BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022479
(296 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 234 bits (597), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 120/267 (44%), Positives = 163/267 (61%), Gaps = 6/267 (2%)
Query: 23 GRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL 82
GRF ++ +G G+ K VY+ D E +EVAW +++ ++ R E + L+ L
Sbjct: 25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSER--QRFKEEAEXLKGL 82
Query: 83 KNKYIIVCYSVWLD--DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
++ I+ Y W + +TE+ TSG L+TY K+ + IK L+ W +Q+L+GL
Sbjct: 83 QHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGL 142
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
++LHT P IIHRDL C NIFI G G VKIGDLG A + R+ A ++IGTPE+ APE
Sbjct: 143 QFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL-KRASFAKAVIGTPEFXAPEX 201
Query: 201 YEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKA 260
YEE Y E VD+Y+FG C LE T E PYSEC + A+IY++VT GVKP + +KV PEVK
Sbjct: 202 YEEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKE 261
Query: 261 FIEKCIAQPR-ARPSASELLKDPFFSE 286
IE CI Q + R S +LL FF E
Sbjct: 262 IIEGCIRQNKDERYSIKDLLNHAFFQE 288
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 135/258 (52%), Gaps = 14/258 (5%)
Query: 27 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
R +G G +VYRA +G+ VA +V++ + + + E+ LL+ L +
Sbjct: 35 RIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCI-KEIDLLKQLNHPN 93
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNL----RTYRKKHRHVSIKALKKWSKQVLEGLEY 142
+I Y+ +++D N LN + E+ +G+L + ++K+ R + + + K+ Q+ LE+
Sbjct: 94 VIKYYASFIED--NELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 143 LHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG-RSHAAHSIIGTPEYMAPE-L 200
+H+ ++HRD+ +N+FI G VK+GDLG ++ AAHS++GTP YM+PE +
Sbjct: 152 MHSRR--VMHRDIKPANVFITAT-GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERI 208
Query: 201 YEEDYTEMVDIYSFGLCLLEMVTMEIP-YSECDSVAKIYKKVTGGVKPQALNKVKDPEVK 259
+E Y DI+S G L EM ++ P Y + ++ + KK+ P + E++
Sbjct: 209 HENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELR 268
Query: 260 AFIEKCI-AQPRARPSAS 276
+ CI P RP +
Sbjct: 269 QLVNMCINPDPEKRPDVT 286
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 137/277 (49%), Gaps = 17/277 (6%)
Query: 15 PFVEVDPSG--RFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRL 72
P V VDP R+ R LG G K Y D + EV +V P ++
Sbjct: 32 PDVLVDPRTMKRYMR-GRFLGKGGFAKCYEITDMDTK-EVFAGKVVPKSMLLKPHQKEKM 89
Query: 73 HSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKW 132
+E+ + ++L N +++ + + DD + + + E+C +L K+ + V+ + +
Sbjct: 90 STEIAIHKSLDNPHVVGFHGFFEDD--DFVYVVLEICRRRSLLELHKRRKAVTEPEARYF 147
Query: 133 SKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA-IVGRSHAAHSIIG 191
+Q ++G++YLH + +IHRDL N+F+N ++ VKIGD G A I ++ G
Sbjct: 148 MRQTIQGVQYLHNNR--VIHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDGERKKTLCG 204
Query: 192 TPEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPY-SECDSVAKIYKKVTGGVKPQA 249
TP Y+APE L ++ ++ VDI+S G L ++ + P+ + C I K P+
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH 264
Query: 250 LNKVKDPEVKAFIEKCI-AQPRARPSASELLKDPFFS 285
+N P A I + + A P RPS +ELL D FF+
Sbjct: 265 IN----PVASALIRRMLHADPTLRPSVAELLTDEFFT 297
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 136/277 (49%), Gaps = 17/277 (6%)
Query: 15 PFVEVDPSG--RFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRL 72
P V VDP R+ R LG G K Y D + EV +V P ++
Sbjct: 32 PDVLVDPRTMKRYMR-GRFLGKGGFAKCYEITDMDTK-EVFAGKVVPKSMLLKPHQKEKM 89
Query: 73 HSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKW 132
+E+ + ++L N +++ + + DD + + + E+C +L K+ + V+ + +
Sbjct: 90 STEIAIHKSLDNPHVVGFHGFFEDD--DFVYVVLEICRRRSLLELHKRRKAVTEPEARYF 147
Query: 133 SKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA-IVGRSHAAHSIIG 191
+Q ++G++YLH + +IHRDL N+F+N ++ VKIGD G A I + G
Sbjct: 148 MRQTIQGVQYLHNNR--VIHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDGERKKDLCG 204
Query: 192 TPEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPY-SECDSVAKIYKKVTGGVKPQA 249
TP Y+APE L ++ ++ VDI+S G L ++ + P+ + C I K P+
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH 264
Query: 250 LNKVKDPEVKAFIEKCI-AQPRARPSASELLKDPFFS 285
+N P A I + + A P RPS +ELL D FF+
Sbjct: 265 IN----PVASALIRRMLHADPTLRPSVAELLTDEFFT 297
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 136/277 (49%), Gaps = 17/277 (6%)
Query: 15 PFVEVDPSG--RFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRL 72
P V VDP R+ R LG G K Y D + EV +V P ++
Sbjct: 32 PDVLVDPRTMKRYMR-GRFLGKGGFAKCYEITDMDTK-EVFAGKVVPKSMLLKPHQKEKM 89
Query: 73 HSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKW 132
+E+ + ++L N +++ + + DD + + + E+C +L K+ + V+ + +
Sbjct: 90 STEIAIHKSLDNPHVVGFHGFFEDD--DFVYVVLEICRRRSLLELHKRRKAVTEPEARYF 147
Query: 133 SKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA-IVGRSHAAHSIIG 191
+Q ++G++YLH + +IHRDL N+F+N ++ VKIGD G A I + G
Sbjct: 148 MRQTIQGVQYLHNNR--VIHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDGERKKXLCG 204
Query: 192 TPEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPY-SECDSVAKIYKKVTGGVKPQA 249
TP Y+APE L ++ ++ VDI+S G L ++ + P+ + C I K P+
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH 264
Query: 250 LNKVKDPEVKAFIEKCI-AQPRARPSASELLKDPFFS 285
+N P A I + + A P RPS +ELL D FF+
Sbjct: 265 IN----PVASALIRRMLHADPTLRPSVAELLTDEFFT 297
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 136/277 (49%), Gaps = 17/277 (6%)
Query: 15 PFVEVDPSG--RFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRL 72
P V VDP R+ R LG G K Y D + EV +V P ++
Sbjct: 16 PDVLVDPRTMKRYMR-GRFLGKGGFAKCYEITDMDTK-EVFAGKVVPKSMLLKPHQKEKM 73
Query: 73 HSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKW 132
+E+ + ++L N +++ + + DD + + + E+C +L K+ + V+ + +
Sbjct: 74 STEIAIHKSLDNPHVVGFHGFFEDD--DFVYVVLEICRRRSLLELHKRRKAVTEPEARYF 131
Query: 133 SKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA-IVGRSHAAHSIIG 191
+Q ++G++YLH + +IHRDL N+F+N ++ VKIGD G A I + G
Sbjct: 132 MRQTIQGVQYLHNNR--VIHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDGERKKDLCG 188
Query: 192 TPEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPY-SECDSVAKIYKKVTGGVKPQA 249
TP Y+APE L ++ ++ VDI+S G L ++ + P+ + C I K P+
Sbjct: 189 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH 248
Query: 250 LNKVKDPEVKAFIEKCI-AQPRARPSASELLKDPFFS 285
+N P A I + + A P RPS +ELL D FF+
Sbjct: 249 IN----PVASALIRRMLHADPTLRPSVAELLTDEFFT 281
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 132/269 (49%), Gaps = 16/269 (5%)
Query: 20 DPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLL 79
DP ++ R+ + G GA VY A D G EVA Q+ L + +++N E+ ++
Sbjct: 17 DPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIIN----EILVM 71
Query: 80 RTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEG 139
R KN I+ +L + L + E G+L T + + ++ L+
Sbjct: 72 RENKNPNIVNYLDSYL--VGDELWVVMEYLAGGSL-TDVVTETCMDEGQIAAVCRECLQA 128
Query: 140 LEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS-IIGTPEYMAP 198
LE+LH+++ +IHRD+ NI + G G VK+ D GF A + + S ++GTP +MAP
Sbjct: 129 LEFLHSNQ--VIHRDIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAP 185
Query: 199 ELY-EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPE 257
E+ + Y VDI+S G+ +EM+ E PY + + +Y T G P+ N K
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT-PELQNPEKLSA 244
Query: 258 V-KAFIEKCIAQP-RARPSASELLKDPFF 284
+ + F+ +C+ R SA ELL+ F
Sbjct: 245 IFRDFLNRCLEMDVEKRGSAKELLQHQFL 273
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 132/269 (49%), Gaps = 16/269 (5%)
Query: 20 DPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLL 79
DP ++ R+ + G GA VY A D G EVA Q+ L + +++N E+ ++
Sbjct: 17 DPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIIN----EILVM 71
Query: 80 RTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEG 139
R KN I+ +L + L + E G+L T + + ++ L+
Sbjct: 72 RENKNPNIVNYLDSYL--VGDELWVVMEYLAGGSL-TDVVTETCMDEGQIAAVCRECLQA 128
Query: 140 LEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS-IIGTPEYMAP 198
LE+LH+++ +IHRD+ NI + G G VK+ D GF A + + S ++GTP +MAP
Sbjct: 129 LEFLHSNQ--VIHRDIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 185
Query: 199 ELY-EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPE 257
E+ + Y VDI+S G+ +EM+ E PY + + +Y T G P+ N K
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT-PELQNPEKLSA 244
Query: 258 V-KAFIEKCI-AQPRARPSASELLKDPFF 284
+ + F+ +C+ R SA ELL+ F
Sbjct: 245 IFRDFLNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 132/269 (49%), Gaps = 16/269 (5%)
Query: 20 DPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLL 79
DP ++ R+ + G GA VY A D G EVA Q+ L + +++N E+ ++
Sbjct: 17 DPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIIN----EILVM 71
Query: 80 RTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEG 139
R KN I+ +L + L + E G+L T + + ++ L+
Sbjct: 72 RENKNPNIVNYLDSYL--VGDELWVVMEYLAGGSL-TDVVTETCMDEGQIAAVCRECLQA 128
Query: 140 LEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS-IIGTPEYMAP 198
LE+LH+++ +IHRD+ NI + G G VK+ D GF A + + S ++GTP +MAP
Sbjct: 129 LEFLHSNQ--VIHRDIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAP 185
Query: 199 ELY-EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPE 257
E+ + Y VDI+S G+ +EM+ E PY + + +Y T G P+ N K
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT-PELQNPEKLSA 244
Query: 258 V-KAFIEKCI-AQPRARPSASELLKDPFF 284
+ + F+ +C+ R SA ELL+ F
Sbjct: 245 IFRDFLNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 132/269 (49%), Gaps = 16/269 (5%)
Query: 20 DPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLL 79
DP ++ R+ + G GA VY A D G EVA Q+ L + +++N E+ ++
Sbjct: 18 DPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIIN----EILVM 72
Query: 80 RTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEG 139
R KN I+ +L + L + E G+L T + + ++ L+
Sbjct: 73 RENKNPNIVNYLDSYL--VGDELWVVMEYLAGGSL-TDVVTETCMDEGQIAAVCRECLQA 129
Query: 140 LEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS-IIGTPEYMAP 198
LE+LH+++ +IHRD+ NI + G G VK+ D GF A + + S ++GTP +MAP
Sbjct: 130 LEFLHSNQ--VIHRDIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAP 186
Query: 199 ELY-EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPE 257
E+ + Y VDI+S G+ +EM+ E PY + + +Y T G P+ N K
Sbjct: 187 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT-PELQNPEKLSA 245
Query: 258 V-KAFIEKCIAQP-RARPSASELLKDPFF 284
+ + F+ +C+ R SA EL++ F
Sbjct: 246 IFRDFLNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 132/265 (49%), Gaps = 22/265 (8%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV--RLSHFSEDPVLVNRLHSEVQLLRTLKNKYII 88
+LG G VY D + +A ++ R S +S+ LH E+ L + LK+K I+
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQP------LHEEIALHKHLKHKNIV 82
Query: 89 VCYSVWLDDQHNTLNFITEVCTSGNLRTY-RKKHRHV--SIKALKKWSKQVLEGLEYLHT 145
+ ++ + E G+L R K + + + + ++KQ+LEGL+YLH
Sbjct: 83 QYLGSF--SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD 140
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA-IVGRSHAAHSIIGTPEYMAPELYEE- 203
++ I+HRD+ N+ IN G +KI D G + + G + + GT +YMAPE+ ++
Sbjct: 141 NQ--IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKG 198
Query: 204 --DYTEMVDIYSFGLCLLEMVTMEIPYSEC-DSVAKIYKKVTGGVKPQALNKVKDPEVKA 260
Y + DI+S G ++EM T + P+ E + A ++K V P+ + + E KA
Sbjct: 199 PRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPE-IPESMSAEAKA 257
Query: 261 FIEKCI-AQPRARPSASELLKDPFF 284
FI KC P R A++LL D F
Sbjct: 258 FILKCFEPDPDKRACANDLLVDEFL 282
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 132/265 (49%), Gaps = 22/265 (8%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV--RLSHFSEDPVLVNRLHSEVQLLRTLKNKYII 88
+LG G VY D + +A ++ R S +S+ LH E+ L + LK+K I+
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQP------LHEEIALHKHLKHKNIV 68
Query: 89 VCYSVWLDDQHNTLNFITEVCTSGNLRTY-RKKHRHV--SIKALKKWSKQVLEGLEYLHT 145
+ ++ + E G+L R K + + + + ++KQ+LEGL+YLH
Sbjct: 69 QYLGSF--SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD 126
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA-IVGRSHAAHSIIGTPEYMAPELYEE- 203
++ I+HRD+ N+ IN G +KI D G + + G + + GT +YMAPE+ ++
Sbjct: 127 NQ--IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKG 184
Query: 204 --DYTEMVDIYSFGLCLLEMVTMEIPYSEC-DSVAKIYKKVTGGVKPQALNKVKDPEVKA 260
Y + DI+S G ++EM T + P+ E + A ++K V P+ + + E KA
Sbjct: 185 PRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPE-IPESMSAEAKA 243
Query: 261 FIEKCI-AQPRARPSASELLKDPFF 284
FI KC P R A++LL D F
Sbjct: 244 FILKCFEPDPDKRACANDLLVDEFL 268
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 130/256 (50%), Gaps = 18/256 (7%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+G+G+ V+RA + G +VA + F + VN EV +++ L++ I++
Sbjct: 45 IGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAE--RVNEFLREVAIMKRLRHPNIVLFM 100
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSK-----QVLEGLEYLHTH 146
Q L+ +TE + G+L YR H+ + + L + + V +G+ YLH
Sbjct: 101 GA--VTQPPNLSIVTEYLSRGSL--YRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH-AAHSIIGTPEYMAPE-LYEED 204
P I+HR+L N+ ++ VK+ D G + + + ++ S GTPE+MAPE L +E
Sbjct: 157 NPPIVHRNLKSPNLLVDKKY-TVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEP 215
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK 264
E D+YSFG+ L E+ T++ P+ + A++ V K + + +P+V A IE
Sbjct: 216 SNEKSDVYSFGVILWELATLQQPWGNLNP-AQVVAAVGFKCKRLEIPRNLNPQVAAIIEG 274
Query: 265 CIA-QPRARPSASELL 279
C +P RPS + ++
Sbjct: 275 CWTNEPWKRPSFATIM 290
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 16/269 (5%)
Query: 20 DPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLL 79
DP ++ R+ + G GA VY A D G EVA Q+ L + +++N E+ ++
Sbjct: 18 DPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIIN----EILVM 72
Query: 80 RTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEG 139
R KN I+ +L + L + E G+L T + + ++ L+
Sbjct: 73 RENKNPNIVNYLDSYL--VGDELWVVMEYLAGGSL-TDVVTETCMDEGQIAAVCRECLQA 129
Query: 140 LEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS-IIGTPEYMAP 198
LE+LH+++ +IHR++ NI + G G VK+ D GF A + + S ++GTP +MAP
Sbjct: 130 LEFLHSNQ--VIHRNIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 186
Query: 199 ELY-EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPE 257
E+ + Y VDI+S G+ +EM+ E PY + + +Y T G P+ N K
Sbjct: 187 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT-PELQNPEKLSA 245
Query: 258 V-KAFIEKCIAQP-RARPSASELLKDPFF 284
+ + F+ +C+ R SA EL++ F
Sbjct: 246 IFRDFLNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 20/271 (7%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA KVY+A ++E G A + E + E+++L T + YI+
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEE----LEDYIVEIEILATCDHPYIVKLL 74
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCI 150
+ D L + E C G + + R ++ ++ +Q+LE L +LH+ I
Sbjct: 75 GAYYHD--GKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR--I 130
Query: 151 IHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS-HAAHSIIGTPEYMAPE------LYEE 203
IHRDL N+ + G +++ D G +A ++ S IGTP +MAPE + +
Sbjct: 131 IHRDLKAGNVLMTLE-GDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 189
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFI 262
Y DI+S G+ L+EM +E P+ E + + ++ K+ P L K E + F+
Sbjct: 190 PYDYKADIWSLGITLIEMAQIEPPHHELNPM-RVLLKIAKSDPPTLLTPSKWSVEFRDFL 248
Query: 263 EKCIAQ-PRARPSASELLKDPFFSELNDDDS 292
+ + + P RPSA++LL+ PF S + + +
Sbjct: 249 KIALDKNPETRPSAAQLLEHPFVSSITSNKA 279
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 127/256 (49%), Gaps = 18/256 (7%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+G+G+ V+RA + G +VA + F + VN EV +++ L++ I++
Sbjct: 45 IGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAE--RVNEFLREVAIMKRLRHPNIVLFM 100
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSK-----QVLEGLEYLHTH 146
Q L+ +TE + G+L YR H+ + + L + + V +G+ YLH
Sbjct: 101 GA--VTQPPNLSIVTEYLSRGSL--YRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH-AAHSIIGTPEYMAPE-LYEED 204
P I+HRDL N+ ++ VK+ D G + + + GTPE+MAPE L +E
Sbjct: 157 NPPIVHRDLKSPNLLVDKKY-TVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEP 215
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK 264
E D+YSFG+ L E+ T++ P+ + A++ V K + + +P+V A IE
Sbjct: 216 SNEKSDVYSFGVILWELATLQQPWGNLNP-AQVVAAVGFKCKRLEIPRNLNPQVAAIIEG 274
Query: 265 CIA-QPRARPSASELL 279
C +P RPS + ++
Sbjct: 275 CWTNEPWKRPSFATIM 290
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 20/271 (7%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA KVY+A ++E G A + E + E+++L T + YI+
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEE----LEDYIVEIEILATCDHPYIVKLL 82
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCI 150
+ D L + E C G + + R ++ ++ +Q+LE L +LH+ I
Sbjct: 83 GAYYHD--GKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR--I 138
Query: 151 IHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS-HAAHSIIGTPEYMAPE------LYEE 203
IHRDL N+ + G +++ D G +A ++ S IGTP +MAPE + +
Sbjct: 139 IHRDLKAGNVLMTLE-GDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 197
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFI 262
Y DI+S G+ L+EM +E P+ E + + ++ K+ P L K E + F+
Sbjct: 198 PYDYKADIWSLGITLIEMAQIEPPHHELNPM-RVLLKIAKSDPPTLLTPSKWSVEFRDFL 256
Query: 263 EKCIAQ-PRARPSASELLKDPFFSELNDDDS 292
+ + + P RPSA++LL+ PF S + + +
Sbjct: 257 KIALDKNPETRPSAAQLLEHPFVSSITSNKA 287
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 127/263 (48%), Gaps = 13/263 (4%)
Query: 27 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
+ +LLG G+ VYRA G+EVA + + +V R+ +EV++ LK+
Sbjct: 14 KVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAG-MVQRVQNEVKIHCQLKHPS 72
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHT 145
I+ Y+ + D N + + E+C +G + Y K + S + + Q++ G+ YLH+
Sbjct: 73 ILELYNYFEDS--NYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS 130
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAH-SIIGTPEYMAPELYEED 204
H I+HRDL SN+ + N+ +KI D G A + H H ++ GTP Y++PE+
Sbjct: 131 HG--ILHRDLTLSNLLLTRNM-NIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRS 187
Query: 205 YTEM-VDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIE 263
+ D++S G C+ + + P + D+V KV + + E K I
Sbjct: 188 AHGLESDVWSLG-CMFYTLLIGRPPFDTDTVKNTLNKVV--LADYEMPSFLSIEAKDLIH 244
Query: 264 KCIAQ-PRARPSASELLKDPFFS 285
+ + + P R S S +L PF S
Sbjct: 245 QLLRRNPADRLSLSSVLDHPFMS 267
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 131/261 (50%), Gaps = 25/261 (9%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG G+ VY+A +E G VA QV + ++ + E+ +++ + +++ Y
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEII------KEISIMQQCDSPHVVKYY 90
Query: 92 SVWLDDQHNTLNFITEVCTSGNLR-TYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCI 150
+ ++ L + E C +G++ R +++ ++ + + L+GLEYLH
Sbjct: 91 GSYF--KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK-- 146
Query: 151 IHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS-IIGTPEYMAPELYEE-DYTEM 208
IHRD+ NI +N G K+ D G A + A + +IGTP +MAPE+ +E Y +
Sbjct: 147 IHRDIKAGNILLNTE-GHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCV 205
Query: 209 VDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKA-----FIE 263
DI+S G+ +EM + PY++ + I+ T P K PE+ + F++
Sbjct: 206 ADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTN--PPPTFRK---PELWSDNFTDFVK 260
Query: 264 KCIAQ-PRARPSASELLKDPF 283
+C+ + P R +A++LL+ PF
Sbjct: 261 QCLVKSPEQRATATQLLQHPF 281
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 132/258 (51%), Gaps = 12/258 (4%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVC 90
LG G K + D + EV ++ P ++ E+ + R+L +++++
Sbjct: 24 FLGKGGFAKCFEISDADTK-EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 82
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCI 150
+ + D+ + + + E+C +L K+ + ++ + + +Q++ G +YLH + +
Sbjct: 83 HGFFEDN--DFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--V 138
Query: 151 IHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR-SHAAHSIIGTPEYMAPE-LYEEDYTEM 208
IHRDL N+F+N ++ +VKIGD G A V ++ GTP Y+APE L ++ ++
Sbjct: 139 IHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 197
Query: 209 VDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCI-A 267
VD++S G C++ + + P E + + Y ++ ++ K +P + I+K +
Sbjct: 198 VDVWSIG-CIMYTLLVGKPPFETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQT 254
Query: 268 QPRARPSASELLKDPFFS 285
P ARP+ +ELL D FF+
Sbjct: 255 DPTARPTINELLNDEFFT 272
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 132/258 (51%), Gaps = 12/258 (4%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVC 90
LG G K + D + EV ++ P ++ E+ + R+L +++++
Sbjct: 28 FLGKGGFAKCFEISDADTK-EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 86
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCI 150
+ + D+ + + + E+C +L K+ + ++ + + +Q++ G +YLH + +
Sbjct: 87 HGFFEDN--DFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--V 142
Query: 151 IHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR-SHAAHSIIGTPEYMAPE-LYEEDYTEM 208
IHRDL N+F+N ++ +VKIGD G A V ++ GTP Y+APE L ++ ++
Sbjct: 143 IHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 201
Query: 209 VDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCI-A 267
VD++S G C++ + + P E + + Y ++ ++ K +P + I+K +
Sbjct: 202 VDVWSIG-CIMYTLLVGKPPFETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQT 258
Query: 268 QPRARPSASELLKDPFFS 285
P ARP+ +ELL D FF+
Sbjct: 259 DPTARPTINELLNDEFFT 276
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 132/258 (51%), Gaps = 12/258 (4%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVC 90
LG G K + D + EV ++ P ++ E+ + R+L +++++
Sbjct: 48 FLGKGGFAKCFEISDADTK-EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 106
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCI 150
+ + D+ + + + E+C +L K+ + ++ + + +Q++ G +YLH + +
Sbjct: 107 HGFFEDN--DFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--V 162
Query: 151 IHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSII-GTPEYMAPE-LYEEDYTEM 208
IHRDL N+F+N ++ +VKIGD G A V ++ GTP Y+APE L ++ ++
Sbjct: 163 IHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 221
Query: 209 VDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCI-A 267
VD++S G C++ + + P E + + Y ++ ++ K +P + I+K +
Sbjct: 222 VDVWSIG-CIMYTLLVGKPPFETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQT 278
Query: 268 QPRARPSASELLKDPFFS 285
P ARP+ +ELL D FF+
Sbjct: 279 DPTARPTINELLNDEFFT 296
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 132/258 (51%), Gaps = 12/258 (4%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVC 90
LG G K + D + EV ++ P ++ E+ + R+L +++++
Sbjct: 46 FLGKGGFAKCFEISDADTK-EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 104
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCI 150
+ + D+ + + + E+C +L K+ + ++ + + +Q++ G +YLH + +
Sbjct: 105 HGFFEDN--DFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--V 160
Query: 151 IHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSII-GTPEYMAPE-LYEEDYTEM 208
IHRDL N+F+N ++ +VKIGD G A V ++ GTP Y+APE L ++ ++
Sbjct: 161 IHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 219
Query: 209 VDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCI-A 267
VD++S G C++ + + P E + + Y ++ ++ K +P + I+K +
Sbjct: 220 VDVWSIG-CIMYTLLVGKPPFETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQT 276
Query: 268 QPRARPSASELLKDPFFS 285
P ARP+ +ELL D FF+
Sbjct: 277 DPTARPTINELLNDEFFT 294
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 132/258 (51%), Gaps = 12/258 (4%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVC 90
LG G K + D + EV ++ P ++ E+ + R+L +++++
Sbjct: 24 FLGKGGFAKCFEISDADTK-EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 82
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCI 150
+ + D+ + + + E+C +L K+ + ++ + + +Q++ G +YLH + +
Sbjct: 83 HGFFEDN--DFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--V 138
Query: 151 IHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR-SHAAHSIIGTPEYMAPE-LYEEDYTEM 208
IHRDL N+F+N ++ +VKIGD G A V ++ GTP Y+APE L ++ ++
Sbjct: 139 IHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 197
Query: 209 VDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCI-A 267
VD++S G C++ + + P E + + Y ++ ++ K +P + I+K +
Sbjct: 198 VDVWSIG-CIMYTLLVGKPPFETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQT 254
Query: 268 QPRARPSASELLKDPFFS 285
P ARP+ +ELL D FF+
Sbjct: 255 DPTARPTINELLNDEFFT 272
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 132/258 (51%), Gaps = 12/258 (4%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVC 90
LG G K + D + EV ++ P ++ E+ + R+L +++++
Sbjct: 22 FLGKGGFAKCFEISDADTK-EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 80
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCI 150
+ + D+ + + + E+C +L K+ + ++ + + +Q++ G +YLH + +
Sbjct: 81 HGFFEDN--DFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--V 136
Query: 151 IHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSII-GTPEYMAPE-LYEEDYTEM 208
IHRDL N+F+N ++ +VKIGD G A V ++ GTP Y+APE L ++ ++
Sbjct: 137 IHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 195
Query: 209 VDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCI-A 267
VD++S G C++ + + P E + + Y ++ ++ K +P + I+K +
Sbjct: 196 VDVWSIG-CIMYTLLVGKPPFETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQT 252
Query: 268 QPRARPSASELLKDPFFS 285
P ARP+ +ELL D FF+
Sbjct: 253 DPTARPTINELLNDEFFT 270
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 141/296 (47%), Gaps = 29/296 (9%)
Query: 1 MPAANSNMSDRD---GEPFVEVDPSGRFGRYSDL--LGSGAVKKVYRAFDQEEGIEVAWN 55
MPA S +D E F + DP F SDL +G G+ VY A D VA
Sbjct: 29 MPAGGRAGSLKDPDVAELFFKDDPEKLF---SDLREIGHGSFGAVYFARDVRNSEVVAIK 85
Query: 56 QVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVC---TSG 112
++ S + + + EV+ L+ L++ I +L + +T + E C S
Sbjct: 86 KMSYSGKQSNEKWQDII-KEVRFLQKLRHPNTIQYRGCYL--REHTAWLVMEYCLGSASD 142
Query: 113 NLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIG 172
L ++K + V I A+ + L+GL YLH+H +IHRD+ NI ++ G VK+G
Sbjct: 143 LLEVHKKPLQEVEIAAV---THGALQGLAYLHSHN--MIHRDVKAGNILLS-EPGLVKLG 196
Query: 173 DLGFAAIVGRSHAAHSIIGTPEYMAPELY----EEDYTEMVDIYSFGLCLLEMVTMEIPY 228
D G A+I+ A+ +GTP +MAPE+ E Y VD++S G+ +E+ + P
Sbjct: 197 DFGSASIMA---PANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 253
Query: 229 SECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIAQ-PRARPSASELLKDPF 283
++++ +Y + P + + F++ C+ + P+ RP++ LLK F
Sbjct: 254 FNMNAMSALY-HIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 308
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 129/268 (48%), Gaps = 21/268 (7%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+G+G+ + + + +G + W ++ +E + L SEV LLR LK+ I+ Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQM--LVSEVNLLRELKHPNIVRYY 71
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTY----RKKHRHVSIKALKKWSKQVLEGLEYLHTHE 147
+D + TL + E C G+L + K+ +++ + + + Q+ L+ H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 148 P---CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA-AHSIIGTPEYMAPE-LYE 202
++HRDL +N+F++G VK+GD G A I+ + A + +GTP YM+PE +
Sbjct: 132 DGGHTVLHRDLKPANVFLDGK-QNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNR 190
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK---DPEVK 259
Y E DI+S G L E+ + P++ A K++ G ++ ++ E+
Sbjct: 191 MSYNEKSDIWSLGCLLYELCALMPPFT-----AFSQKELAGKIREGKFRRIPYRYSDELN 245
Query: 260 AFIEKCI-AQPRARPSASELLKDPFFSE 286
I + + + RPS E+L++P E
Sbjct: 246 EIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 129/268 (48%), Gaps = 21/268 (7%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+G+G+ + + + +G + W ++ +E + L SEV LLR LK+ I+ Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQM--LVSEVNLLRELKHPNIVRYY 71
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTY----RKKHRHVSIKALKKWSKQVLEGLEYLHTHE 147
+D + TL + E C G+L + K+ +++ + + + Q+ L+ H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 148 P---CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA-AHSIIGTPEYMAPE-LYE 202
++HRDL +N+F++G VK+GD G A I+ + A + +GTP YM+PE +
Sbjct: 132 DGGHTVLHRDLKPANVFLDGK-QNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNR 190
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK---DPEVK 259
Y E DI+S G L E+ + P++ A K++ G ++ ++ E+
Sbjct: 191 MSYNEKSDIWSLGCLLYELCALMPPFT-----AFSQKELAGKIREGKFRRIPYRYSDELN 245
Query: 260 AFIEKCI-AQPRARPSASELLKDPFFSE 286
I + + + RPS E+L++P E
Sbjct: 246 EIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 131/266 (49%), Gaps = 31/266 (11%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+GSG+ VY+ + G +VA + ++ + P + +EV +LR ++ I++
Sbjct: 20 IGSGSFGTVYKG--KWHG-DVAVKMLNVT--APTPQQLQAFKNEVGVLRKTRHVNILLFM 74
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVS-----IKALKKWSKQVLEGLEYLHTH 146
Q L +T+ C +L H H S +K L ++Q G++YLH
Sbjct: 75 GYSTKPQ---LAIVTQWCEGSSLY----HHLHASETKFEMKKLIDIARQTARGMDYLHA- 126
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR---SHAAHSIIGTPEYMAPELYEE 203
IIHRDL +NIF++ + VKIGD G A + R SH + G+ +MAPE+
Sbjct: 127 -KSIIHRDLKSNNIFLHED-NTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 184
Query: 204 D----YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKD---P 256
Y+ D+Y+FG+ L E++T ++PYS ++ +I + V G L+KV+
Sbjct: 185 QDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPK 244
Query: 257 EVKAFIEKCIAQPR-ARPSASELLKD 281
+K + +C+ + R RPS +L +
Sbjct: 245 RMKRLMAECLKKKRDERPSFPRILAE 270
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 120/258 (46%), Gaps = 13/258 (5%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG+G V++ + G+ +A +L H P + N++ E+Q+L + YI+ Y
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMAR---KLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY 89
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ D ++ E G+L KK + + L K S V++GL YL I+
Sbjct: 90 GAFYSD--GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 146
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE-LYEEDYTEMVD 210
HRD+ SNI +N G++K+ D G + + S A+S +GT YM+PE L Y+ D
Sbjct: 147 HRDVKPSNILVNSR-GEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSD 204
Query: 211 IYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVK---PQALNKVKDPEVKAFIEKC-I 266
I+S GL L+EM P I++ + V P+ + V E + F+ KC I
Sbjct: 205 IWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLI 264
Query: 267 AQPRARPSASELLKDPFF 284
P R +L+ F
Sbjct: 265 KNPAERADLKQLMVHAFI 282
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 127/259 (49%), Gaps = 15/259 (5%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+G G+ V A + G VA ++ L +L N EV ++R +++ ++ Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN----EVVIMRDYQHENVVEMY 214
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ +L + L + E G L T H ++ + + VL+ L LH +I
Sbjct: 215 NSYLVG--DELWVVMEFLEGGAL-TDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ--GVI 269
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS-IIGTPEYMAPELYEE-DYTEMV 209
HRD+ +I + + G+VK+ D GF A V + ++GTP +MAPEL Y V
Sbjct: 270 HRDIKSDSILLTHD-GRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 328
Query: 210 DIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIEKCIAQ 268
DI+S G+ ++EMV E PY + K K + + P+ N K P +K F+++ + +
Sbjct: 329 DIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVR 387
Query: 269 -PRARPSASELLKDPFFSE 286
P R +A+ELLK PF ++
Sbjct: 388 DPAQRATAAELLKHPFLAK 406
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 127/268 (47%), Gaps = 21/268 (7%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+G+G+ + + + +G + W ++ +E + L SEV LLR LK+ I+ Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQM--LVSEVNLLRELKHPNIVRYY 71
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTY----RKKHRHVSIKALKKWSKQVLEGLEYLHTHE 147
+D + TL + E C G+L + K+ +++ + + + Q+ L+ H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 148 P---CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA-AHSIIGTPEYMAPE-LYE 202
++HRDL +N+F++G VK+GD G A I+ A +GTP YM+PE +
Sbjct: 132 DGGHTVLHRDLKPANVFLDGK-QNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNR 190
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK---DPEVK 259
Y E DI+S G L E+ + P++ A K++ G ++ ++ E+
Sbjct: 191 MSYNEKSDIWSLGCLLYELCALMPPFT-----AFSQKELAGKIREGKFRRIPYRYSDELN 245
Query: 260 AFIEKCI-AQPRARPSASELLKDPFFSE 286
I + + + RPS E+L++P E
Sbjct: 246 EIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 127/259 (49%), Gaps = 15/259 (5%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+G G+ V A + G VA ++ L +L N EV ++R +++ ++ Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN----EVVIMRDYQHENVVEMY 137
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ +L + L + E G L T H ++ + + VL+ L LH +I
Sbjct: 138 NSYLVG--DELWVVMEFLEGGAL-TDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ--GVI 192
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS-IIGTPEYMAPELYEE-DYTEMV 209
HRD+ +I + + G+VK+ D GF A V + ++GTP +MAPEL Y V
Sbjct: 193 HRDIKSDSILLTHD-GRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 251
Query: 210 DIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIEKCIAQ 268
DI+S G+ ++EMV E PY + K K + + P+ N K P +K F+++ + +
Sbjct: 252 DIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVR 310
Query: 269 -PRARPSASELLKDPFFSE 286
P R +A+ELLK PF ++
Sbjct: 311 DPAQRATAAELLKHPFLAK 329
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 126/257 (49%), Gaps = 15/257 (5%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+G G+ V A ++ G +VA + L +L N EV ++R ++ ++ Y
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFN----EVVIMRDYQHFNVVEMY 108
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+L + L + E G L + R ++ + + + VL+ L YLH +I
Sbjct: 109 KSYLVGEE--LWVLMEFLQGGALTDIVSQVR-LNEEQIATVCEAVLQALAYLHAQ--GVI 163
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS-IIGTPEYMAPELYEED-YTEMV 209
HRD+ +I + + G+VK+ D GF A + + ++GTP +MAPE+ Y V
Sbjct: 164 HRDIKSDSILLTLD-GRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEV 222
Query: 210 DIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIEKCIAQ 268
DI+S G+ ++EMV E PY DS + K++ P+ N K P ++ F+E+ + +
Sbjct: 223 DIWSLGIMVIEMVDGEPPYFS-DSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVR 281
Query: 269 -PRARPSASELLKDPFF 284
P+ R +A ELL PF
Sbjct: 282 DPQERATAQELLDHPFL 298
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 127/259 (49%), Gaps = 15/259 (5%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+G G+ V A + G VA ++ L +L N EV ++R +++ ++ Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN----EVVIMRDYQHENVVEMY 94
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ +L + L + E G L T H ++ + + VL+ L LH +I
Sbjct: 95 NSYLVG--DELWVVMEFLEGGAL-TDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ--GVI 149
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS-IIGTPEYMAPELYEE-DYTEMV 209
HRD+ +I + + G+VK+ D GF A V + ++GTP +MAPEL Y V
Sbjct: 150 HRDIKSDSILLTHD-GRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 208
Query: 210 DIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIEKCIAQ 268
DI+S G+ ++EMV E PY + K K + + P+ N K P +K F+++ + +
Sbjct: 209 DIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVR 267
Query: 269 -PRARPSASELLKDPFFSE 286
P R +A+ELLK PF ++
Sbjct: 268 DPAQRATAAELLKHPFLAK 286
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 127/259 (49%), Gaps = 15/259 (5%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+G G+ V A + G VA ++ L +L N EV ++R +++ ++ Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN----EVVIMRDYQHENVVEMY 92
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ +L + L + E G L T H ++ + + VL+ L LH +I
Sbjct: 93 NSYLVG--DELWVVMEFLEGGAL-TDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ--GVI 147
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS-IIGTPEYMAPELYEE-DYTEMV 209
HRD+ +I + + G+VK+ D GF A V + ++GTP +MAPEL Y V
Sbjct: 148 HRDIKSDSILLTHD-GRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 206
Query: 210 DIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIEKCIAQ 268
DI+S G+ ++EMV E PY + K K + + P+ N K P +K F+++ + +
Sbjct: 207 DIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVR 265
Query: 269 -PRARPSASELLKDPFFSE 286
P R +A+ELLK PF ++
Sbjct: 266 DPAQRATAAELLKHPFLAK 284
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 127/259 (49%), Gaps = 15/259 (5%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+G G+ V A + G VA ++ L +L N EV ++R +++ ++ Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN----EVVIMRDYQHENVVEMY 83
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ +L + L + E G L T H ++ + + VL+ L LH +I
Sbjct: 84 NSYLVG--DELWVVMEFLEGGAL-TDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ--GVI 138
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS-IIGTPEYMAPELYEE-DYTEMV 209
HRD+ +I + + G+VK+ D GF A V + ++GTP +MAPEL Y V
Sbjct: 139 HRDIKSDSILLTHD-GRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 197
Query: 210 DIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIEKCIAQ 268
DI+S G+ ++EMV E PY + K K + + P+ N K P +K F+++ + +
Sbjct: 198 DIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVR 256
Query: 269 -PRARPSASELLKDPFFSE 286
P R +A+ELLK PF ++
Sbjct: 257 DPAQRATAAELLKHPFLAK 275
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 121/264 (45%), Gaps = 19/264 (7%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG+G V++ + G+ +A +L H P + N++ E+Q+L + YI+ Y
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMAR---KLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY 70
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ D ++ E G+L KK + + L K S V++GL YL I+
Sbjct: 71 GAFYSD--GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 127
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE-LYEEDYTEMVD 210
HRD+ SNI +N G++K+ D G + + S A+S +GT YM+PE L Y+ D
Sbjct: 128 HRDVKPSNILVNSR-GEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 211 IYSFGLCLLEMVTMEIPYSECD---------SVAKIYKKVTGGVKPQALNKVKDPEVKAF 261
I+S GL L+EM P D ++ ++ + P+ + V E + F
Sbjct: 186 IWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDF 245
Query: 262 IEKC-IAQPRARPSASELLKDPFF 284
+ KC I P R +L+ F
Sbjct: 246 VNKCLIKNPAERADLKQLMVHAFI 269
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 127/259 (49%), Gaps = 15/259 (5%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+G G+ V A + G VA ++ L +L N EV ++R +++ ++ Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN----EVVIMRDYQHENVVEMY 87
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ +L + L + E G L T H ++ + + VL+ L LH +I
Sbjct: 88 NSYLVG--DELWVVMEFLEGGAL-TDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ--GVI 142
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS-IIGTPEYMAPELYEE-DYTEMV 209
HRD+ +I + + G+VK+ D GF A V + ++GTP +MAPEL Y V
Sbjct: 143 HRDIKSDSILLTHD-GRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 201
Query: 210 DIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIEKCIAQ 268
DI+S G+ ++EMV E PY + K K + + P+ N K P +K F+++ + +
Sbjct: 202 DIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVR 260
Query: 269 -PRARPSASELLKDPFFSE 286
P R +A+ELLK PF ++
Sbjct: 261 DPAQRATAAELLKHPFLAK 279
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 135/281 (48%), Gaps = 26/281 (9%)
Query: 13 GEPFVEVDPSGRFGRYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVN 70
E F + DP F SDL +G G+ VY A D VA ++ S + +
Sbjct: 5 AELFFKDDPEKLF---SDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQD 61
Query: 71 RLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVC---TSGNLRTYRKKHRHVSIK 127
+ EV+ L+ L++ I +L + +T + E C S L ++K + V I
Sbjct: 62 II-KEVRFLQKLRHPNTIQYRGCYL--REHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA 118
Query: 128 ALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAH 187
A+ + L+GL YLH+H +IHRD+ NI ++ G VK+GD G A+I+ A+
Sbjct: 119 AV---THGALQGLAYLHSHN--MIHRDVKAGNILLS-EPGLVKLGDFGSASIMA---PAN 169
Query: 188 SIIGTPEYMAPELY----EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTG 243
+GTP +MAPE+ E Y VD++S G+ +E+ + P ++++ +Y +
Sbjct: 170 XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY-HIAQ 228
Query: 244 GVKPQALNKVKDPEVKAFIEKCIAQ-PRARPSASELLKDPF 283
P + + F++ C+ + P+ RP++ LLK F
Sbjct: 229 NESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 120/263 (45%), Gaps = 18/263 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA KVY+A ++E + A + E + E+ +L + + I+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE----LEDYMVEIDILASCDHPNIVKLL 100
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCI 150
+ N L + E C G + + R ++ ++ KQ L+ L YLH ++ I
Sbjct: 101 DAFY--YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK--I 156
Query: 151 IHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS-HAAHSIIGTPEYMAPELY------EE 203
IHRDL NI + G +K+ D G +A R+ S IGTP +MAPE+ +
Sbjct: 157 IHRDLKAGNILFTLD-GDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIE 263
Y D++S G+ L+EM +E P+ E + + + K A K F++
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLK 275
Query: 264 KCIAQP-RARPSASELLKDPFFS 285
KC+ + AR + S+LL+ PF +
Sbjct: 276 KCLEKNVDARWTTSQLLQHPFVT 298
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 130/266 (48%), Gaps = 31/266 (11%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+GSG+ VY+ + G +VA + ++ + P + +EV +LR ++ I++
Sbjct: 32 IGSGSFGTVYKG--KWHG-DVAVKMLNVT--APTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVS-----IKALKKWSKQVLEGLEYLHTH 146
Q L +T+ C +L H H S +K L ++Q G++YLH
Sbjct: 87 GYSTKPQ---LAIVTQWCEGSSLY----HHLHASETKFEMKKLIDIARQTARGMDYLHA- 138
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR---SHAAHSIIGTPEYMAPELYEE 203
IIHRDL +NIF++ + VKIGD G A R SH + G+ +MAPE+
Sbjct: 139 -KSIIHRDLKSNNIFLHED-NTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 196
Query: 204 D----YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKD---P 256
Y+ D+Y+FG+ L E++T ++PYS ++ +I + V G L+KV+
Sbjct: 197 QDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPK 256
Query: 257 EVKAFIEKCIAQPR-ARPSASELLKD 281
+K + +C+ + R RPS +L +
Sbjct: 257 RMKRLMAECLKKKRDERPSFPRILAE 282
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 129/272 (47%), Gaps = 15/272 (5%)
Query: 16 FVEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSE 75
F +DP F + + G G+ +V++ D VA +++ E + + E
Sbjct: 20 FQSMDPEELFTKLEKI-GKGSFGEVFKGIDNRTQKVVA---IKIIDLEEAEDEIEDIQQE 75
Query: 76 VQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQ 135
+ +L + Y+ Y +L D L I E G+ + + + ++
Sbjct: 76 ITVLSQCDSPYVTKYYGSYLKD--TKLWIIMEYLGGGSALDLLEPGP-LDETQIATILRE 132
Query: 136 VLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAA-HSIIGTPE 194
+L+GL+YLH+ + IHRD+ +N+ ++ + G+VK+ D G A + + ++ +GTP
Sbjct: 133 ILKGLDYLHSEKK--IHRDIKAANVLLSEH-GEVKLADFGVAGQLTDTQIKRNTFVGTPF 189
Query: 195 YMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKV 253
+MAPE+ ++ Y DI+S G+ +E+ E P+SE + ++ + P L
Sbjct: 190 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLF--LIPKNNPPTLEGN 247
Query: 254 KDPEVKAFIEKCI-AQPRARPSASELLKDPFF 284
+K F+E C+ +P RP+A ELLK F
Sbjct: 248 YSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 279
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 130/266 (48%), Gaps = 31/266 (11%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+GSG+ VY+ + G +VA + ++ + P + +EV +LR ++ I++
Sbjct: 32 IGSGSFGTVYKG--KWHG-DVAVKMLNVT--APTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVS-----IKALKKWSKQVLEGLEYLHTH 146
Q L +T+ C +L H H S +K L ++Q G++YLH
Sbjct: 87 GYSTAPQ---LAIVTQWCEGSSLY----HHLHASETKFEMKKLIDIARQTARGMDYLHA- 138
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR---SHAAHSIIGTPEYMAPELYEE 203
IIHRDL +NIF++ + VKIGD G A R SH + G+ +MAPE+
Sbjct: 139 -KSIIHRDLKSNNIFLHED-NTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 196
Query: 204 D----YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKD---P 256
Y+ D+Y+FG+ L E++T ++PYS ++ +I + V G L+KV+
Sbjct: 197 QDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPK 256
Query: 257 EVKAFIEKCIAQPR-ARPSASELLKD 281
+K + +C+ + R RPS +L +
Sbjct: 257 RMKRLMAECLKKKRDERPSFPRILAE 282
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 118/255 (46%), Gaps = 11/255 (4%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG+G V++ + G+ +A +L H P + N++ E+Q+L + YI+ Y
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMAR---KLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY 73
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ D ++ E G+L KK + + L K S V++GL YL I+
Sbjct: 74 GAFYSD--GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 130
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE-LYEEDYTEMVD 210
HRD+ SNI +N G++K+ D G + + A+ +GT YM+PE L Y+ D
Sbjct: 131 HRDVKPSNILVNSR-GEIKLCDFGVSGQL-IDEMANEFVGTRSYMSPERLQGTHYSVQSD 188
Query: 211 IYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKC-IAQP 269
I+S GL L+EM P ++ ++ + P+ + V E + F+ KC I P
Sbjct: 189 IWSMGLSLVEMAVGRYPRPPM-AIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNP 247
Query: 270 RARPSASELLKDPFF 284
R +L+ F
Sbjct: 248 AERADLKQLMVHAFI 262
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 119/263 (45%), Gaps = 18/263 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA KVY+A ++E + A + E + E+ +L + + I+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE----LEDYMVEIDILASCDHPNIVKLL 100
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCI 150
+ N L + E C G + + R ++ ++ KQ L+ L YLH ++ I
Sbjct: 101 DAFY--YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK--I 156
Query: 151 IHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS-HAAHSIIGTPEYMAPELY------EE 203
IHRDL NI + G +K+ D G +A R S IGTP +MAPE+ +
Sbjct: 157 IHRDLKAGNILFTLD-GDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIE 263
Y D++S G+ L+EM +E P+ E + + + K A K F++
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLK 275
Query: 264 KCIAQP-RARPSASELLKDPFFS 285
KC+ + AR + S+LL+ PF +
Sbjct: 276 KCLEKNVDARWTTSQLLQHPFVT 298
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 117/260 (45%), Gaps = 17/260 (6%)
Query: 30 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIV 89
+++G G KVYRAF G EVA R + + + E +L LK+ II
Sbjct: 13 EIIGIGGFGKVYRAF--WIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPC 149
V L + + L + E G L R + L W+ Q+ G+ YLH
Sbjct: 71 LRGVCLKEPN--LCLVMEFARGGPLNRVLSGKR-IPPDILVNWAVQIARGMNYLHDEAIV 127
Query: 150 -IIHRDLNCSNIFI-----NGNIGQ--VKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELY 201
IIHRDL SNI I NG++ +KI D G A R+ S G +MAPE+
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT-TKMSAAGAYAWMAPEVI 186
Query: 202 EED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKA 260
+++ D++S+G+ L E++T E+P+ D +A Y + + +P K
Sbjct: 187 RASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAK- 245
Query: 261 FIEKCI-AQPRARPSASELL 279
+E C P +RPS + +L
Sbjct: 246 LMEDCWNPDPHSRPSFTNIL 265
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 134/289 (46%), Gaps = 38/289 (13%)
Query: 30 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIV 89
+++GSGA V A+ + +VA ++ L ++ L E+Q + + I+
Sbjct: 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTS---MDELLKEIQAMSQCHHPNIVS 77
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWS-----------KQVLE 138
Y+ ++ + L + ++ + G++ K H+ K K ++VLE
Sbjct: 78 YYTSFV--VKDELWLVMKLLSGGSVLDIIK---HIVAKGEHKSGVLDESTIATILREVLE 132
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG------RSHAAHSIIGT 192
GLEYLH + IHRD+ NI + G G V+I D G +A + R+ + +GT
Sbjct: 133 GLEYLHKNGQ--IHRDVKAGNILL-GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
Query: 193 PEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTG------- 243
P +MAPE+ E+ Y DI+SFG+ +E+ T PY + + + +
Sbjct: 190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET 249
Query: 244 GVKPQALNKVKDPEVKAFIEKCIAQ-PRARPSASELLKDPFFSELNDDD 291
GV+ + + K + I C+ + P RP+A+ELL+ FF + + +
Sbjct: 250 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKE 298
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 125/257 (48%), Gaps = 15/257 (5%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG G+ KV A+ G +VA + ++ + R+ E+ LR L++ +II Y
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD-MQGRIEREISYLRLLRHPHIIKLY 74
Query: 92 SVWLDDQHNTLNFITEVCTSGN-LRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCI 150
V I + +GN L Y + +S + +++ +Q++ +EY H H+ I
Sbjct: 75 DVIKSKD----EIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK--I 128
Query: 151 IHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEEDYTE--M 208
+HRDL N+ ++ ++ VKI D G + I+ + + G+P Y APE+
Sbjct: 129 VHRDLKPENLLLDEHL-NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE 187
Query: 209 VDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK-CIA 267
VD++S G+ L M+ +P+ + +S+ ++K ++ GV L K P I++ I
Sbjct: 188 VDVWSCGVILYVMLCRRLPFDD-ESIPVLFKNISNGV--YTLPKFLSPGAAGLIKRMLIV 244
Query: 268 QPRARPSASELLKDPFF 284
P R S E+++D +F
Sbjct: 245 NPLNRISIHEIMQDDWF 261
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 132/284 (46%), Gaps = 38/284 (13%)
Query: 30 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIV 89
+++GSGA V A+ + +VA ++ L ++ L E+Q + + I+
Sbjct: 16 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTS---MDELLKEIQAMSQCHHPNIVS 72
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWS-----------KQVLE 138
Y+ ++ + L + ++ + G++ K H+ K K ++VLE
Sbjct: 73 YYTSFV--VKDELWLVMKLLSGGSVLDIIK---HIVAKGEHKSGVLDESTIATILREVLE 127
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG------RSHAAHSIIGT 192
GLEYLH + IHRD+ NI + G G V+I D G +A + R+ + +GT
Sbjct: 128 GLEYLHKNGQ--IHRDVKAGNILL-GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 184
Query: 193 PEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTG------- 243
P +MAPE+ E+ Y DI+SFG+ +E+ T PY + + + +
Sbjct: 185 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET 244
Query: 244 GVKPQALNKVKDPEVKAFIEKCIAQ-PRARPSASELLKDPFFSE 286
GV+ + + K + I C+ + P RP+A+ELL+ FF +
Sbjct: 245 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQK 288
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 125/257 (48%), Gaps = 15/257 (5%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG G+ KV A+ G +VA + ++ + R+ E+ LR L++ +II Y
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD-MQGRIEREISYLRLLRHPHIIKLY 80
Query: 92 SVWLDDQHNTLNFITEVCTSGN-LRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCI 150
V I + +GN L Y + +S + +++ +Q++ +EY H H+ I
Sbjct: 81 DVIKSKD----EIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK--I 134
Query: 151 IHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEEDYTE--M 208
+HRDL N+ ++ ++ VKI D G + I+ + + G+P Y APE+
Sbjct: 135 VHRDLKPENLLLDEHL-NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE 193
Query: 209 VDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK-CIA 267
VD++S G+ L M+ +P+ + +S+ ++K ++ GV L K P I++ I
Sbjct: 194 VDVWSCGVILYVMLCRRLPFDD-ESIPVLFKNISNGV--YTLPKFLSPGAAGLIKRMLIV 250
Query: 268 QPRARPSASELLKDPFF 284
P R S E+++D +F
Sbjct: 251 NPLNRISIHEIMQDDWF 267
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 129/271 (47%), Gaps = 15/271 (5%)
Query: 17 VEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEV 76
+ +DP F + + G G+ +V++ D VA +++ E + + E+
Sbjct: 1 MSLDPEELFTKLEKI-GKGSFGEVFKGIDNRTQKVVA---IKIIDLEEAEDEIEDIQQEI 56
Query: 77 QLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQV 136
+L + Y+ Y +L D L I E G+ + + + +++
Sbjct: 57 TVLSQCDSPYVTKYYGSYLKD--TKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREI 113
Query: 137 LEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAA-HSIIGTPEY 195
L+GL+YLH+ + IHRD+ +N+ ++ + G+VK+ D G A + + ++ +GTP +
Sbjct: 114 LKGLDYLHSEKK--IHRDIKAANVLLSEH-GEVKLADFGVAGQLTDTQIKRNTFVGTPFW 170
Query: 196 MAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK 254
MAPE+ ++ Y DI+S G+ +E+ E P+SE + ++ + P L
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLF--LIPKNNPPTLEGNY 228
Query: 255 DPEVKAFIEKCI-AQPRARPSASELLKDPFF 284
+K F+E C+ +P RP+A ELLK F
Sbjct: 229 SKPLKEFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 125/257 (48%), Gaps = 15/257 (5%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG G+ KV A+ G +VA + ++ + R+ E+ LR L++ +II Y
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD-MQGRIEREISYLRLLRHPHIIKLY 70
Query: 92 SVWLDDQHNTLNFITEVCTSGN-LRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCI 150
V I + +GN L Y + +S + +++ +Q++ +EY H H+ I
Sbjct: 71 DVIKSKD----EIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK--I 124
Query: 151 IHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEEDYTE--M 208
+HRDL N+ ++ ++ VKI D G + I+ + + G+P Y APE+
Sbjct: 125 VHRDLKPENLLLDEHL-NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE 183
Query: 209 VDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK-CIA 267
VD++S G+ L M+ +P+ + +S+ ++K ++ GV L K P I++ I
Sbjct: 184 VDVWSCGVILYVMLCRRLPFDD-ESIPVLFKNISNGV--YTLPKFLSPGAAGLIKRMLIV 240
Query: 268 QPRARPSASELLKDPFF 284
P R S E+++D +F
Sbjct: 241 NPLNRISIHEIMQDDWF 257
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 128/271 (47%), Gaps = 15/271 (5%)
Query: 17 VEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEV 76
++ DP F + + G G+ +V++ D VA +++ E + + E+
Sbjct: 16 LKADPEELFTKLEKI-GKGSFGEVFKGIDNRTQKVVA---IKIIDLEEAEDEIEDIQQEI 71
Query: 77 QLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQV 136
+L + Y+ Y +L D L I E G+ + + + +++
Sbjct: 72 TVLSQCDSPYVTKYYGSYLKD--TKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREI 128
Query: 137 LEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS-IIGTPEY 195
L+GL+YLH+ + IHRD+ +N+ ++ + G+VK+ D G A + + + +GTP +
Sbjct: 129 LKGLDYLHSEKK--IHRDIKAANVLLSEH-GEVKLADFGVAGQLTDTQIKRNXFVGTPFW 185
Query: 196 MAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK 254
MAPE+ ++ Y DI+S G+ +E+ E P+SE + ++ + P L
Sbjct: 186 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLF--LIPKNNPPTLEGNY 243
Query: 255 DPEVKAFIEKCI-AQPRARPSASELLKDPFF 284
+K F+E C+ +P RP+A ELLK F
Sbjct: 244 SKPLKEFVEACLNKEPSFRPTAKELLKHKFI 274
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 125/257 (48%), Gaps = 15/257 (5%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG G+ KV A+ G +VA + ++ + R+ E+ LR L++ +II Y
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD-MQGRIEREISYLRLLRHPHIIKLY 79
Query: 92 SVWLDDQHNTLNFITEVCTSGN-LRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCI 150
V I + +GN L Y + +S + +++ +Q++ +EY H H+ I
Sbjct: 80 DVIKSKDE----IIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK--I 133
Query: 151 IHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEEDYTE--M 208
+HRDL N+ ++ ++ VKI D G + I+ + + G+P Y APE+
Sbjct: 134 VHRDLKPENLLLDEHL-NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE 192
Query: 209 VDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK-CIA 267
VD++S G+ L M+ +P+ + +S+ ++K ++ GV L K P I++ I
Sbjct: 193 VDVWSCGVILYVMLCRRLPFDD-ESIPVLFKNISNGV--YTLPKFLSPGAAGLIKRMLIV 249
Query: 268 QPRARPSASELLKDPFF 284
P R S E+++D +F
Sbjct: 250 NPLNRISIHEIMQDDWF 266
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 131/264 (49%), Gaps = 31/264 (11%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+GSG+ VY+ + G +VA + ++ + P + +EV +LR ++ I++
Sbjct: 43 IGSGSFGTVYKG--KWHG-DVAVKMLNVT--APTPQQLQAFKNEVGVLRKTRHVNILLFM 97
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHV-----SIKALKKWSKQVLEGLEYLHTH 146
Q L +T+ C +L H H+ + L ++Q +G++YLH
Sbjct: 98 GYSTKPQ---LAIVTQWCEGSSL----YHHLHIIETKFEMIKLIDIARQTAQGMDYLHA- 149
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR---SHAAHSIIGTPEYMAPELY-- 201
IIHRDL +NIF++ ++ VKIGD G A + R SH + G+ +MAPE+
Sbjct: 150 -KSIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 207
Query: 202 --EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKD---P 256
+ Y+ D+Y+FG+ L E++T ++PYS ++ +I V G L+KV+
Sbjct: 208 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK 267
Query: 257 EVKAFIEKCIAQPR-ARPSASELL 279
+K + +C+ + R RP ++L
Sbjct: 268 AMKRLMAECLKKKRDERPLFPQIL 291
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 131/264 (49%), Gaps = 31/264 (11%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+GSG+ VY+ + G +VA + ++ + P + +EV +LR ++ I++
Sbjct: 44 IGSGSFGTVYKG--KWHG-DVAVKMLNVT--APTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHV-----SIKALKKWSKQVLEGLEYLHTH 146
Q L +T+ C +L H H+ + L ++Q +G++YLH
Sbjct: 99 GYSTKPQ---LAIVTQWCEGSSLY----HHLHIIETKFEMIKLIDIARQTAQGMDYLHA- 150
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR---SHAAHSIIGTPEYMAPELY-- 201
IIHRDL +NIF++ ++ VKIGD G A + R SH + G+ +MAPE+
Sbjct: 151 -KSIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 208
Query: 202 --EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKD---P 256
+ Y+ D+Y+FG+ L E++T ++PYS ++ +I V G L+KV+
Sbjct: 209 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK 268
Query: 257 EVKAFIEKCIAQPR-ARPSASELL 279
+K + +C+ + R RP ++L
Sbjct: 269 AMKRLMAECLKKKRDERPLFPQIL 292
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 128/271 (47%), Gaps = 15/271 (5%)
Query: 17 VEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEV 76
+ +DP F + + G G+ +V++ D VA +++ E + + E+
Sbjct: 1 MSLDPEELFTKLEKI-GKGSFGEVFKGIDNRTQKVVA---IKIIDLEEAEDEIEDIQQEI 56
Query: 77 QLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQV 136
+L + Y+ Y +L D L I E G+ + + + +++
Sbjct: 57 TVLSQCDSPYVTKYYGSYLKD--TKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREI 113
Query: 137 LEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS-IIGTPEY 195
L+GL+YLH+ + IHRD+ +N+ ++ + G+VK+ D G A + + + +GTP +
Sbjct: 114 LKGLDYLHSEKK--IHRDIKAANVLLSEH-GEVKLADFGVAGQLTDTQIKRNXFVGTPFW 170
Query: 196 MAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK 254
MAPE+ ++ Y DI+S G+ +E+ E P+SE + ++ + P L
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLF--LIPKNNPPTLEGNY 228
Query: 255 DPEVKAFIEKCI-AQPRARPSASELLKDPFF 284
+K F+E C+ +P RP+A ELLK F
Sbjct: 229 SKPLKEFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 118/263 (44%), Gaps = 18/263 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA KVY+A ++E + A + E + E+ +L + + I+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE----LEDYMVEIDILASCDHPNIVKLL 100
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCI 150
+ N L + E C G + + R ++ ++ KQ L+ L YLH ++ I
Sbjct: 101 DAFY--YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK--I 156
Query: 151 IHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS-HAAHSIIGTPEYMAPELY------EE 203
IHRDL NI + G +K+ D G +A R IGTP +MAPE+ +
Sbjct: 157 IHRDLKAGNILFTLD-GDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDR 215
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIE 263
Y D++S G+ L+EM +E P+ E + + + K A K F++
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLK 275
Query: 264 KCIAQP-RARPSASELLKDPFFS 285
KC+ + AR + S+LL+ PF +
Sbjct: 276 KCLEKNVDARWTTSQLLQHPFVT 298
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 9/203 (4%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG+G V++ + G+ +A +L H P + N++ E+Q+L + YI+ Y
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMAR---KLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY 132
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ D ++ E G+L KK + + L K S V++GL YL I+
Sbjct: 133 GAFYSD--GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 189
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE-LYEEDYTEMVD 210
HRD+ SNI +N G++K+ D G + + S A+S +GT YM+PE L Y+ D
Sbjct: 190 HRDVKPSNILVNSR-GEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSD 247
Query: 211 IYSFGLCLLEMVTMEIPYSECDS 233
I+S GL L+EM P D+
Sbjct: 248 IWSMGLSLVEMAVGRYPIPPPDA 270
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 106/231 (45%), Gaps = 24/231 (10%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKN------ 84
+G GA VY+A D G VA VR+ + E P+ R EV LLR L+
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVR---EVALLRRLEAFEHPNV 68
Query: 85 -KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKA--LKKWSKQVLEGLE 141
+ + VC + D + V +LRTY K + A +K +Q L GL+
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFEHV--DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLD 126
Query: 142 YLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE-L 200
+LH + CI+HRDL NI + G VK+ D G A I A ++ T Y APE L
Sbjct: 127 FLHAN--CIVHRDLKPENILVTSG-GTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVL 183
Query: 201 YEEDYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQ 248
+ Y VD++S G EM + + SE D + KI+ + G+ P+
Sbjct: 184 LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI--GLPPE 232
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 126/277 (45%), Gaps = 15/277 (5%)
Query: 19 VDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQL 78
VDP F + D +G G+ +VY+ D VA +++ E + + E+ +
Sbjct: 15 VDPEELFTKL-DRIGKGSFGEVYKGIDNHTKEVVA---IKIIDLEEAEDEIEDIQQEITV 70
Query: 79 LRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLE 138
L + YI + +L + L I E G+ K + + +++L+
Sbjct: 71 LSQCDSPYITRYFGSYL--KSTKLWIIMEYLGGGSALDLLKPG-PLEETYIATILREILK 127
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS-IIGTPEYMA 197
GL+YLH+ IHRD+ +N+ ++ G VK+ D G A + + + +GTP +MA
Sbjct: 128 GLDYLHSERK--IHRDIKAANVLLSEQ-GDVKLADFGVAGQLTDTQIKRNXFVGTPFWMA 184
Query: 198 PELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDP 256
PE+ ++ Y DI+S G+ +E+ E P S+ + ++ + P L
Sbjct: 185 PEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLF--LIPKNSPPTLEGQHSK 242
Query: 257 EVKAFIEKCIAQ-PRARPSASELLKDPFFSELNDDDS 292
K F+E C+ + PR RP+A ELLK F + S
Sbjct: 243 PFKEFVEACLNKDPRFRPTAKELLKHKFITRYTKKTS 279
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 137/287 (47%), Gaps = 35/287 (12%)
Query: 20 DPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLL 79
DP+G F +L+G+G +VY+ + G A + ++ E+ + E+ +L
Sbjct: 21 DPAGIF-ELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEI-----KQEINML 74
Query: 80 RTLKNKYIIVCY--------SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKK 131
+ + I Y +DDQ L + E C +G++ K + ++K ++
Sbjct: 75 KKYSHHRNIATYYGAFIKKNPPGMDDQ---LWLVMEFCGAGSVTDLIKNTKGNTLK--EE 129
Query: 132 W----SKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA-A 186
W +++L GL +LH H+ +IHRD+ N+ + N +VK+ D G +A + R+
Sbjct: 130 WIAYICREILRGLSHLHQHK--VIHRDIKGQNVLLTEN-AEVKLVDFGVSAQLDRTVGRR 186
Query: 187 HSIIGTPEYMAPELYEED------YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKK 240
++ IGTP +MAPE+ D Y D++S G+ +EM P + + ++
Sbjct: 187 NTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF-L 245
Query: 241 VTGGVKPQALNKVKDPEVKAFIEKCIAQPRA-RPSASELLKDPFFSE 286
+ P+ +K + ++FIE C+ + + RP+ +L+K PF +
Sbjct: 246 IPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRD 292
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 106/231 (45%), Gaps = 24/231 (10%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKN------ 84
+G GA VY+A D G VA VR+ + E P+ R EV LLR L+
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVR---EVALLRRLEAFEHPNV 68
Query: 85 -KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKA--LKKWSKQVLEGLE 141
+ + VC + D + V +LRTY K + A +K +Q L GL+
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFEHV--DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLD 126
Query: 142 YLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE-L 200
+LH + CI+HRDL NI + G VK+ D G A I A ++ T Y APE L
Sbjct: 127 FLHAN--CIVHRDLKPENILVTSG-GTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVL 183
Query: 201 YEEDYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQ 248
+ Y VD++S G EM + + SE D + KI+ + G+ P+
Sbjct: 184 LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI--GLPPE 232
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 131/264 (49%), Gaps = 31/264 (11%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+GSG+ VY+ + G +VA + ++ + P + +EV +LR ++ I++
Sbjct: 21 IGSGSFGTVYKG--KWHG-DVAVKMLNVT--APTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHV-----SIKALKKWSKQVLEGLEYLHTH 146
Q L +T+ C +L H H+ + L ++Q +G++YLH
Sbjct: 76 GYSTKPQ---LAIVTQWCEGSSLY----HHLHIIETKFEMIKLIDIARQTAQGMDYLHA- 127
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR---SHAAHSIIGTPEYMAPELY-- 201
IIHRDL +NIF++ ++ VKIGD G A + R SH + G+ +MAPE+
Sbjct: 128 -KSIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 185
Query: 202 --EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKD---P 256
+ Y+ D+Y+FG+ L E++T ++PYS ++ +I V G L+KV+
Sbjct: 186 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK 245
Query: 257 EVKAFIEKCIAQPR-ARPSASELL 279
+K + +C+ + R RP ++L
Sbjct: 246 AMKRLMAECLKKKRDERPLFPQIL 269
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 106/231 (45%), Gaps = 24/231 (10%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKN------ 84
+G GA VY+A D G VA VR+ + E P+ R EV LLR L+
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVR---EVALLRRLEAFEHPNV 68
Query: 85 -KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKA--LKKWSKQVLEGLE 141
+ + VC + D + V +LRTY K + A +K +Q L GL+
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFEHV--DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLD 126
Query: 142 YLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE-L 200
+LH + CI+HRDL NI + G VK+ D G A I A ++ T Y APE L
Sbjct: 127 FLHAN--CIVHRDLKPENILVTSG-GTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVL 183
Query: 201 YEEDYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQ 248
+ Y VD++S G EM + + SE D + KI+ + G+ P+
Sbjct: 184 LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI--GLPPE 232
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 131/264 (49%), Gaps = 31/264 (11%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+GSG+ VY+ + G +VA + ++ + P + +EV +LR ++ I++
Sbjct: 21 IGSGSFGTVYKG--KWHG-DVAVKMLNVT--APTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHV-----SIKALKKWSKQVLEGLEYLHTH 146
Q L +T+ C +L H H+ + L ++Q +G++YLH
Sbjct: 76 GYSTKPQ---LAIVTQWCEGSSLY----HHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 128
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR---SHAAHSIIGTPEYMAPELY-- 201
IIHRDL +NIF++ ++ VKIGD G A + R SH + G+ +MAPE+
Sbjct: 129 --SIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 185
Query: 202 --EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKD---P 256
+ Y+ D+Y+FG+ L E++T ++PYS ++ +I V G L+KV+
Sbjct: 186 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK 245
Query: 257 EVKAFIEKCIAQPR-ARPSASELL 279
+K + +C+ + R RP ++L
Sbjct: 246 AMKRLMAECLKKKRDERPLFPQIL 269
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 131/264 (49%), Gaps = 31/264 (11%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+GSG+ VY+ + G +VA + ++ + P + +EV +LR ++ I++
Sbjct: 16 IGSGSFGTVYKG--KWHG-DVAVKMLNVT--APTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHV-----SIKALKKWSKQVLEGLEYLHTH 146
Q L +T+ C +L H H+ + L ++Q +G++YLH
Sbjct: 71 GYSTKPQ---LAIVTQWCEGSSLY----HHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 123
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR---SHAAHSIIGTPEYMAPELY-- 201
IIHRDL +NIF++ ++ VKIGD G A + R SH + G+ +MAPE+
Sbjct: 124 S--IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 180
Query: 202 --EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKD---P 256
+ Y+ D+Y+FG+ L E++T ++PYS ++ +I V G L+KV+
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK 240
Query: 257 EVKAFIEKCIAQPR-ARPSASELL 279
+K + +C+ + R RP ++L
Sbjct: 241 AMKRLMAECLKKKRDERPLFPQIL 264
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 131/264 (49%), Gaps = 31/264 (11%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+GSG+ VY+ + G +VA + ++ + P + +EV +LR ++ I++
Sbjct: 18 IGSGSFGTVYKG--KWHG-DVAVKMLNVT--APTPQQLQAFKNEVGVLRKTRHVNILLFM 72
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHV-----SIKALKKWSKQVLEGLEYLHTH 146
Q L +T+ C +L H H+ + L ++Q +G++YLH
Sbjct: 73 GYSTKPQ---LAIVTQWCEGSSLY----HHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 125
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR---SHAAHSIIGTPEYMAPELY-- 201
IIHRDL +NIF++ ++ VKIGD G A + R SH + G+ +MAPE+
Sbjct: 126 --SIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 182
Query: 202 --EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKD---P 256
+ Y+ D+Y+FG+ L E++T ++PYS ++ +I V G L+KV+
Sbjct: 183 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK 242
Query: 257 EVKAFIEKCIAQPR-ARPSASELL 279
+K + +C+ + R RP ++L
Sbjct: 243 AMKRLMAECLKKKRDERPLFPQIL 266
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 131/271 (48%), Gaps = 32/271 (11%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LGSGA V+ ++ G+E ++ + V + ++ +E+++L++L + II +
Sbjct: 30 LGSGAFGDVHLVEERSSGLE---RVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIF 86
Query: 92 SVWLDDQHNTLNFITEVCTSGNLR----TYRKKHRHVSIKALKKWSKQVLEGLEYLHTHE 147
V+ +D HN + + E C G L + + + + +S + + KQ++ L Y H+
Sbjct: 87 EVF-EDYHN-MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH 144
Query: 148 PCIIHRDLNCSNIFINGNI--GQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEEDY 205
++H+DL NI +KI D G A + + + GT YMAPE+++ D
Sbjct: 145 --VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDV 202
Query: 206 TEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG----------VKPQALNKVKD 255
T DI+S G+ + ++T +P++ S+ ++ +K T + PQA++ +K
Sbjct: 203 TFKCDIWSAGVVMYFLLTGCLPFTGT-SLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQ 261
Query: 256 PEVKAFIEKCIAQPRARPSASELLKDPFFSE 286
K P RPSA+++L +F +
Sbjct: 262 MLTK--------DPERRPSAAQVLHHEWFKQ 284
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 131/264 (49%), Gaps = 31/264 (11%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+GSG+ VY+ + G +VA + ++ + P + +EV +LR ++ I++
Sbjct: 16 IGSGSFGTVYKG--KWHG-DVAVKMLNVT--APTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHV-----SIKALKKWSKQVLEGLEYLHTH 146
Q L +T+ C +L H H+ + L ++Q +G++YLH
Sbjct: 71 GYSTAPQ---LAIVTQWCEGSSLY----HHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 123
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR---SHAAHSIIGTPEYMAPELY-- 201
IIHRDL +NIF++ ++ VKIGD G A + R SH + G+ +MAPE+
Sbjct: 124 S--IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 180
Query: 202 --EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKD---P 256
+ Y+ D+Y+FG+ L E++T ++PYS ++ +I V G L+KV+
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK 240
Query: 257 EVKAFIEKCIAQPR-ARPSASELL 279
+K + +C+ + R RP ++L
Sbjct: 241 AMKRLMAECLKKKRDERPLFPQIL 264
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 130/278 (46%), Gaps = 25/278 (8%)
Query: 29 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFS------EDPVLVNRLHSEVQLLRTL 82
S LGSGA +V AF+++ +VA + F+ DP L + +E+++L+ L
Sbjct: 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPAL--NVETEIEILKKL 197
Query: 83 KNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEY 142
+ II + + + + + E+ G L ++ + K + Q+L ++Y
Sbjct: 198 NHPCIIKIKNFFDAEDYY---IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 254
Query: 143 LHTHEPCIIHRDLNCSNIFINGNIGQ--VKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
LH E IIHRDL N+ ++ +KI D G + I+G + ++ GTP Y+APE+
Sbjct: 255 LH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV 312
Query: 201 Y----EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG---VKPQALNKV 253
Y VD +S G+ L ++ P+SE + + ++T G P+ +V
Sbjct: 313 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 372
Query: 254 KDPEVKAFIEKCIAQPRARPSASELLKDPFFSELNDDD 291
+ + + + P+AR + E L+ P+ L D+D
Sbjct: 373 SEKALDLVKKLLVVDPKARFTTEEALRHPW---LQDED 407
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 9/203 (4%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG+G V++ + G+ +A +L H P + N++ E+Q+L + YI+ Y
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMAR---KLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY 70
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ D ++ E G+L KK + + L K S V++GL YL I+
Sbjct: 71 GAFYSD--GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 127
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE-LYEEDYTEMVD 210
HRD+ SNI +N G++K+ D G + + S A+S +GT YM+PE L Y+ D
Sbjct: 128 HRDVKPSNILVNSR-GEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 211 IYSFGLCLLEMVTMEIPYSECDS 233
I+S GL L+EM P D+
Sbjct: 186 IWSMGLSLVEMAVGRYPIPPPDA 208
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 9/203 (4%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG+G V++ + G+ +A +L H P + N++ E+Q+L + YI+ Y
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMAR---KLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY 97
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ D ++ E G+L KK + + L K S V++GL YL I+
Sbjct: 98 GAFYSD--GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 154
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE-LYEEDYTEMVD 210
HRD+ SNI +N G++K+ D G + + S A+S +GT YM+PE L Y+ D
Sbjct: 155 HRDVKPSNILVNSR-GEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSD 212
Query: 211 IYSFGLCLLEMVTMEIPYSECDS 233
I+S GL L+EM P D+
Sbjct: 213 IWSMGLSLVEMAVGRYPIPPPDA 235
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 130/278 (46%), Gaps = 25/278 (8%)
Query: 29 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFS------EDPVLVNRLHSEVQLLRTL 82
S LGSGA +V AF+++ +VA + F+ DP L + +E+++L+ L
Sbjct: 21 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL--NVETEIEILKKL 78
Query: 83 KNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEY 142
+ II + + + + + E+ G L ++ + K + Q+L ++Y
Sbjct: 79 NHPCIIKIKNFFDAEDYY---IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 135
Query: 143 LHTHEPCIIHRDLNCSNIFINGNIGQ--VKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
LH E IIHRDL N+ ++ +KI D G + I+G + ++ GTP Y+APE+
Sbjct: 136 LH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV 193
Query: 201 Y----EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG---VKPQALNKV 253
Y VD +S G+ L ++ P+SE + + ++T G P+ +V
Sbjct: 194 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 253
Query: 254 KDPEVKAFIEKCIAQPRARPSASELLKDPFFSELNDDD 291
+ + + + P+AR + E L+ P+ L D+D
Sbjct: 254 SEKALDLVKKLLVVDPKARFTTEEALRHPW---LQDED 288
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 126/260 (48%), Gaps = 14/260 (5%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+G G+ K E+G + ++ +S S +R EV +L +K+ I+
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESR--REVAVLANMKHPNIVQYR 89
Query: 92 SVWLDDQHNTLNFITEVCTSGNL--RTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPC 149
+ +++ +L + + C G+L R +K + W Q+ L+ H H+
Sbjct: 90 ESF--EENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALK--HVHDRK 145
Query: 150 IIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS-HAAHSIIGTPEYMAPELYE-EDYTE 207
I+HRD+ NIF+ + G V++GD G A ++ + A + IGTP Y++PE+ E + Y
Sbjct: 146 ILHRDIKSQNIFLTKD-GTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNN 204
Query: 208 MVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA 267
DI++ G L E+ T++ + + K ++G P +L+ D +++ + +
Sbjct: 205 KSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYD--LRSLVSQLFK 262
Query: 268 Q-PRARPSASELLKDPFFSE 286
+ PR RPS + +L+ F ++
Sbjct: 263 RNPRDRPSVNSILEKGFIAK 282
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 130/278 (46%), Gaps = 25/278 (8%)
Query: 29 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFS------EDPVLVNRLHSEVQLLRTL 82
S LGSGA +V AF+++ +VA + F+ DP L + +E+++L+ L
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL--NVETEIEILKKL 72
Query: 83 KNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEY 142
+ II + + + + + E+ G L ++ + K + Q+L ++Y
Sbjct: 73 NHPCIIKIKNFFDAEDYY---IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 143 LHTHEPCIIHRDLNCSNIFINGNIGQ--VKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
LH E IIHRDL N+ ++ +KI D G + I+G + ++ GTP Y+APE+
Sbjct: 130 LH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV 187
Query: 201 Y----EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG---VKPQALNKV 253
Y VD +S G+ L ++ P+SE + + ++T G P+ +V
Sbjct: 188 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 247
Query: 254 KDPEVKAFIEKCIAQPRARPSASELLKDPFFSELNDDD 291
+ + + + P+AR + E L+ P+ L D+D
Sbjct: 248 SEKALDLVKKLLVVDPKARFTTEEALRHPW---LQDED 282
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 9/203 (4%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG+G V++ + G+ +A +L H P + N++ E+Q+L + YI+ Y
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMAR---KLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY 70
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ D ++ E G+L KK + + L K S V++GL YL I+
Sbjct: 71 GAFYSD--GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 127
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE-LYEEDYTEMVD 210
HRD+ SNI +N G++K+ D G + + S A+S +GT YM+PE L Y+ D
Sbjct: 128 HRDVKPSNILVNSR-GEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 211 IYSFGLCLLEMVTMEIPYSECDS 233
I+S GL L+EM P D+
Sbjct: 186 IWSMGLSLVEMAVGRYPIPPPDA 208
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 130/278 (46%), Gaps = 25/278 (8%)
Query: 29 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFS------EDPVLVNRLHSEVQLLRTL 82
S LGSGA +V AF+++ +VA + F+ DP L + +E+++L+ L
Sbjct: 14 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL--NVETEIEILKKL 71
Query: 83 KNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEY 142
+ II + + + + + E+ G L ++ + K + Q+L ++Y
Sbjct: 72 NHPCIIKIKNFFDAEDYY---IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 128
Query: 143 LHTHEPCIIHRDLNCSNIFINGNIGQ--VKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
LH E IIHRDL N+ ++ +KI D G + I+G + ++ GTP Y+APE+
Sbjct: 129 LH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV 186
Query: 201 Y----EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG---VKPQALNKV 253
Y VD +S G+ L ++ P+SE + + ++T G P+ +V
Sbjct: 187 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 246
Query: 254 KDPEVKAFIEKCIAQPRARPSASELLKDPFFSELNDDD 291
+ + + + P+AR + E L+ P+ L D+D
Sbjct: 247 SEKALDLVKKLLVVDPKARFTTEEALRHPW---LQDED 281
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 130/278 (46%), Gaps = 25/278 (8%)
Query: 29 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFS------EDPVLVNRLHSEVQLLRTL 82
S LGSGA +V AF+++ +VA + F+ DP L + +E+++L+ L
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL--NVETEIEILKKL 72
Query: 83 KNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEY 142
+ II + + + + + E+ G L ++ + K + Q+L ++Y
Sbjct: 73 NHPCIIKIKNFFDAEDYY---IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 143 LHTHEPCIIHRDLNCSNIFINGNIGQ--VKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
LH E IIHRDL N+ ++ +KI D G + I+G + ++ GTP Y+APE+
Sbjct: 130 LH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV 187
Query: 201 Y----EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG---VKPQALNKV 253
Y VD +S G+ L ++ P+SE + + ++T G P+ +V
Sbjct: 188 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 247
Query: 254 KDPEVKAFIEKCIAQPRARPSASELLKDPFFSELNDDD 291
+ + + + P+AR + E L+ P+ L D+D
Sbjct: 248 SEKALDLVKKLLVVDPKARFTTEEALRHPW---LQDED 282
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 130/278 (46%), Gaps = 25/278 (8%)
Query: 29 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFS------EDPVLVNRLHSEVQLLRTL 82
S LGSGA +V AF+++ +VA + F+ DP L + +E+++L+ L
Sbjct: 154 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPAL--NVETEIEILKKL 211
Query: 83 KNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEY 142
+ II + + + + + E+ G L ++ + K + Q+L ++Y
Sbjct: 212 NHPCIIKIKNFFDAEDYY---IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 268
Query: 143 LHTHEPCIIHRDLNCSNIFINGNIGQ--VKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
LH E IIHRDL N+ ++ +KI D G + I+G + ++ GTP Y+APE+
Sbjct: 269 LH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV 326
Query: 201 Y----EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG---VKPQALNKV 253
Y VD +S G+ L ++ P+SE + + ++T G P+ +V
Sbjct: 327 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 386
Query: 254 KDPEVKAFIEKCIAQPRARPSASELLKDPFFSELNDDD 291
+ + + + P+AR + E L+ P+ L D+D
Sbjct: 387 SEKALDLVKKLLVVDPKARFTTEEALRHPW---LQDED 421
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 130/278 (46%), Gaps = 25/278 (8%)
Query: 29 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFS------EDPVLVNRLHSEVQLLRTL 82
S LGSGA +V AF+++ +VA + F+ DP L + +E+++L+ L
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL--NVETEIEILKKL 72
Query: 83 KNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEY 142
+ II + + + + + E+ G L ++ + K + Q+L ++Y
Sbjct: 73 NHPCIIKIKNFFDAEDYY---IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 143 LHTHEPCIIHRDLNCSNIFINGNIGQ--VKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
LH E IIHRDL N+ ++ +KI D G + I+G + ++ GTP Y+APE+
Sbjct: 130 LH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV 187
Query: 201 Y----EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG---VKPQALNKV 253
Y VD +S G+ L ++ P+SE + + ++T G P+ +V
Sbjct: 188 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 247
Query: 254 KDPEVKAFIEKCIAQPRARPSASELLKDPFFSELNDDD 291
+ + + + P+AR + E L+ P+ L D+D
Sbjct: 248 SEKALDLVKKLLVVDPKARFTTEEALRHPW---LQDED 282
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 9/203 (4%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG+G V++ + G+ +A +L H P + N++ E+Q+L + YI+ Y
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMAR---KLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY 70
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ D ++ E G+L KK + + L K S V++GL YL I+
Sbjct: 71 GAFYSD--GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 127
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE-LYEEDYTEMVD 210
HRD+ SNI +N G++K+ D G + + S A+S +GT YM+PE L Y+ D
Sbjct: 128 HRDVKPSNILVNSR-GEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 211 IYSFGLCLLEMVTMEIPYSECDS 233
I+S GL L+EM P D+
Sbjct: 186 IWSMGLSLVEMAVGRYPIPPPDA 208
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 9/203 (4%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG+G V++ + G+ +A +L H P + N++ E+Q+L + YI+ Y
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMAR---KLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY 70
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ D ++ E G+L KK + + L K S V++GL YL I+
Sbjct: 71 GAFYSD--GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 127
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE-LYEEDYTEMVD 210
HRD+ SNI +N G++K+ D G + + S A+S +GT YM+PE L Y+ D
Sbjct: 128 HRDVKPSNILVNSR-GEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 211 IYSFGLCLLEMVTMEIPYSECDS 233
I+S GL L+EM P D+
Sbjct: 186 IWSMGLSLVEMAVGRYPIPPPDA 208
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 133/286 (46%), Gaps = 53/286 (18%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVC 90
+LG GA +V +A + + A ++R H E ++ + SEV LL +L ++Y++
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIR--HTEEK---LSTILSEVMLLASLNHQYVVRY 67
Query: 91 YSVWLDDQH-----------NTLNFITEVCTSGNLRTYRKKH-RHVSIKALKKWS--KQV 136
Y+ WL+ ++ +TL E C +G L Y H +++ + + W +Q+
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTL--YDLIHSENLNQQRDEYWRLFRQI 125
Query: 137 LEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV---------------G 181
LE L Y+H+ IIHRDL NIFI+ + VKIGD G A V G
Sbjct: 126 LEALSYIHSQ--GIIHRDLKPMNIFIDES-RNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 182 RSHAAHSIIGTPEYMAPELYEED--YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYK 239
S S IGT Y+A E+ + Y E +D+YS G+ EM+ P+S I K
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILK 239
Query: 240 KVTGGVKPQALNKVKDPEVKAFIEKCIAQ------PRARPSASELL 279
K+ V + D ++K +EK I + P RP A LL
Sbjct: 240 KLR-SVSIEFPPDFDDNKMK--VEKKIIRLLIDHDPNKRPGARTLL 282
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 105/211 (49%), Gaps = 12/211 (5%)
Query: 25 FGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
F R S+L G+G V + + G+ +A +L H P + N++ E+Q+L +
Sbjct: 18 FERISEL-GAGNGGVVTKVQHRPSGLIMAR---KLIHLEIKPAIRNQIIRELQVLHECNS 73
Query: 85 KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLH 144
YI+ Y + D ++ E G+L K+ + + + L K S VL GL YL
Sbjct: 74 PYIVGFYGAFYSD--GEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLR 131
Query: 145 -THEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE-LYE 202
H+ I+HRD+ SNI +N G++K+ D G + + S A+S +GT YMAPE L
Sbjct: 132 EKHQ--IMHRDVKPSNILVNSR-GEIKLCDFGVSGQLIDS-MANSFVGTRSYMAPERLQG 187
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPYSECDS 233
Y+ DI+S GL L+E+ P D+
Sbjct: 188 THYSVQSDIWSMGLSLVELAVGRYPIPPPDA 218
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 130/264 (49%), Gaps = 31/264 (11%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+GSG+ VY+ + G +VA + ++ + P + +EV +LR ++ I++
Sbjct: 44 IGSGSFGTVYKG--KWHG-DVAVKMLNVT--APTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHV-----SIKALKKWSKQVLEGLEYLHTH 146
Q L +T+ C +L H H+ + L ++Q +G++YLH
Sbjct: 99 GYSTKPQ---LAIVTQWCEGSSL----YHHLHIIETKFEMIKLIDIARQTAQGMDYLHA- 150
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR---SHAAHSIIGTPEYMAPELY-- 201
IIHRDL +NIF++ ++ VKIGD G A R SH + G+ +MAPE+
Sbjct: 151 -KSIIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 208
Query: 202 --EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKD---P 256
+ Y+ D+Y+FG+ L E++T ++PYS ++ +I V G L+KV+
Sbjct: 209 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK 268
Query: 257 EVKAFIEKCIAQPR-ARPSASELL 279
+K + +C+ + R RP ++L
Sbjct: 269 AMKRLMAECLKKKRDERPLFPQIL 292
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 130/264 (49%), Gaps = 31/264 (11%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+GSG+ VY+ + G +VA + ++ + P + +EV +LR ++ I++
Sbjct: 36 IGSGSFGTVYKG--KWHG-DVAVKMLNVT--APTPQQLQAFKNEVGVLRKTRHVNILLFM 90
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHV-----SIKALKKWSKQVLEGLEYLHTH 146
Q L +T+ C +L H H+ + L ++Q +G++YLH
Sbjct: 91 GYSTKPQ---LAIVTQWCEGSSLY----HHLHIIETKFEMIKLIDIARQTAQGMDYLHA- 142
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR---SHAAHSIIGTPEYMAPELY-- 201
IIHRDL +NIF++ ++ VKIGD G A R SH + G+ +MAPE+
Sbjct: 143 -KSIIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 200
Query: 202 --EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKD---P 256
+ Y+ D+Y+FG+ L E++T ++PYS ++ +I V G L+KV+
Sbjct: 201 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK 260
Query: 257 EVKAFIEKCIAQPR-ARPSASELL 279
+K + +C+ + R RP ++L
Sbjct: 261 AMKRLMAECLKKKRDERPLFPQIL 284
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 130/264 (49%), Gaps = 31/264 (11%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+GSG+ VY+ + G +VA + ++ + P + +EV +LR ++ I++
Sbjct: 16 IGSGSFGTVYKG--KWHG-DVAVKMLNVT--APTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHV-----SIKALKKWSKQVLEGLEYLHTH 146
Q L +T+ C +L H H+ + L ++Q +G++YLH
Sbjct: 71 GYSTKPQ---LAIVTQWCEGSSLY----HHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 123
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR---SHAAHSIIGTPEYMAPELY-- 201
IIHRDL +NIF++ ++ VKIGD G A R SH + G+ +MAPE+
Sbjct: 124 --SIIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 180
Query: 202 --EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKD---P 256
+ Y+ D+Y+FG+ L E++T ++PYS ++ +I V G L+KV+
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK 240
Query: 257 EVKAFIEKCIAQPR-ARPSASELL 279
+K + +C+ + R RP ++L
Sbjct: 241 AMKRLMAECLKKKRDERPLFPQIL 264
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 105/234 (44%), Gaps = 27/234 (11%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED----PVLVNRLHSEVQLLRTLKN--- 84
+G GA VY+A D G VA VR+ + P+ R EV LLR L+
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVR---EVALLRRLEAFEH 73
Query: 85 ----KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKA--LKKWSKQVLE 138
+ + VC + D + V +LRTY K + A +K +Q L
Sbjct: 74 PNVVRLMDVCATSRTDREIKVTLVFEHV--DQDLRTYLDKAPPPGLPAETIKDLMRQFLR 131
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAP 198
GL++LH + CI+HRDL NI + G VK+ D G A I A ++ T Y AP
Sbjct: 132 GLDFLHAN--CIVHRDLKPENILVTSG-GTVKLADFGLARIYSYQMALTPVVVTLWYRAP 188
Query: 199 E-LYEEDYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQ 248
E L + Y VD++S G EM + + SE D + KI+ + G+ P+
Sbjct: 189 EVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI--GLPPE 240
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 124/258 (48%), Gaps = 17/258 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+G G+ V A ++ G +VA ++ L +L N EV ++R + ++ Y
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFN----EVVIMRDYHHDNVVDMY 108
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
S +L + L + E G L T H ++ + + VL L YLH +I
Sbjct: 109 SSYLVG--DELWVVMEFLEGGAL-TDIVTHTRMNEEQIATVCLSVLRALSYLHNQ--GVI 163
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS-IIGTPEYMAPELYEE-DYTEMV 209
HRD+ +I + + G++K+ D GF A V + ++GTP +MAPE+ Y V
Sbjct: 164 HRDIKSDSILLTSD-GRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEV 222
Query: 210 DIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQA--LNKVKDPEVKAFIE-KCI 266
DI+S G+ ++EM+ E PY + + +++ + P+ L+KV ++ F++ +
Sbjct: 223 DIWSLGIMVIEMIDGEPPYFN-EPPLQAMRRIRDSLPPRVKDLHKVSS-VLRGFLDLMLV 280
Query: 267 AQPRARPSASELLKDPFF 284
+P R +A ELL PF
Sbjct: 281 REPSQRATAQELLGHPFL 298
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 108/227 (47%), Gaps = 15/227 (6%)
Query: 4 ANSNMSDRDGEPFVEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFS 63
NS S D +P + G + R +G G KV A G EVA + +
Sbjct: 1 GNSITSATDEQPHI-----GNY-RLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQL- 53
Query: 64 EDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRH 123
+P + +L EV++++ L + I+ + V + TL + E + G + Y H
Sbjct: 54 -NPTSLQKLFREVRIMKILNHPNIVKLFEVI--ETEKTLYLVMEYASGGEVFDYLVAHGR 110
Query: 124 VSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 183
+ K + +Q++ ++Y H+ I+HRDL N+ ++G++ +KI D GF+
Sbjct: 111 MKEKEARAKFRQIVSAVQY--CHQKYIVHRDLKAENLLLDGDM-NIKIADFGFSNEFTVG 167
Query: 184 HAAHSIIGTPEYMAPELYEEDYTE--MVDIYSFGLCLLEMVTMEIPY 228
+ + G+P Y APEL++ + VD++S G+ L +V+ +P+
Sbjct: 168 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 131/286 (45%), Gaps = 35/286 (12%)
Query: 11 RDGEPFVEVDPSGRFGRYSDLLGSGAVKKVYRA-FDQEEGIEVAWNQVRLSHFSEDPVLV 69
RD + E++ S S +GSG+ VY+ + + +++ L P
Sbjct: 25 RDSSYYWEIEASEVM--LSTRIGSGSFGTVYKGKWHGDVAVKI------LKVVDPTPEQF 76
Query: 70 NRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKAL 129
+EV +LR ++ I++ D L +T+ C +L KH HV
Sbjct: 77 QAFRNEVAVLRKTRHVNILLFMGYMTKD---NLAIVTQWCEGSSLY----KHLHVQETKF 129
Query: 130 KKW-----SKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH 184
+ + ++Q +G++YLH IIHRD+ +NIF++ + VKIGD G A + R
Sbjct: 130 QMFQLIDIARQTAQGMDYLHAKN--IIHRDMKSNNIFLHEGL-TVKIGDFGLATVKSRWS 186
Query: 185 AAHSI---IGTPEYMAPELYEED----YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKI 237
+ + G+ +MAPE+ ++ D+YS+G+ L E++T E+PYS ++ +I
Sbjct: 187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI 246
Query: 238 YKKVTGGVKPQALNKVKD---PEVKAFIEKCIAQPR-ARPSASELL 279
V G L+K+ +K + C+ + + RP ++L
Sbjct: 247 IFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQIL 292
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 94/196 (47%), Gaps = 13/196 (6%)
Query: 100 NTLNFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
N L + E C G + + R ++ ++ KQ L+ L YLH ++ IIHRDL
Sbjct: 80 NNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK--IIHRDLKAG 137
Query: 159 NIFINGNIGQVKIGDLGFAAIVGRSHAAH--SIIGTPEYMAPELY------EEDYTEMVD 210
NI + G +K+ D G +A R+ S IGTP +MAPE+ + Y D
Sbjct: 138 NILFTLD-GDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKAD 196
Query: 211 IYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIAQP- 269
++S G+ L+EM +E P+ E + + + K A K F++KC+ +
Sbjct: 197 VWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNV 256
Query: 270 RARPSASELLKDPFFS 285
AR + S+LL+ PF +
Sbjct: 257 DARWTTSQLLQHPFVT 272
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 28/261 (10%)
Query: 17 VEVDPSGRFGRYS--DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLH- 73
+ +D R RY D LG G VY+A D+ VA +++L H SE +NR
Sbjct: 1 MALDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTAL 60
Query: 74 SEVQLLRTLKNKYIIVCYSVWLDDQHNTLNF-----ITEVCTSGNLRTYRKKHRHVSIKA 128
E++LL+ L + II + + +L F EV N H
Sbjct: 61 REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSH------- 113
Query: 129 LKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAA-- 186
+K + L+GLEYLH H I+HRDL +N+ ++ N G +K+ D G A G + A
Sbjct: 114 IKAYMLMTLQGLEYLHQH--WILHRDLKPNNLLLDEN-GVLKLADFGLAKSFGSPNRAYX 170
Query: 187 HSIIGTPEYMAPELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY----SECDSVAKIYKK 240
H ++ T Y APEL Y VD+++ G C+L + + +P+ S+ D + +I++
Sbjct: 171 HQVV-TRWYRAPELLFGARMYGVGVDMWAVG-CILAELLLRVPFLPGDSDLDQLTRIFET 228
Query: 241 VTGGVKPQALNKVKDPEVKAF 261
+ + Q + P+ F
Sbjct: 229 LGTPTEEQWPDMCSLPDYVTF 249
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 134/295 (45%), Gaps = 22/295 (7%)
Query: 13 GEPFVEVDPSGRFGRYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVN 70
G D G Y L +G G KV A G EVA + + + +
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL--Q 58
Query: 71 RLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALK 130
+L EV++++ L + I+ + V + TL + E + G + Y H + K +
Sbjct: 59 KLFREVRIMKVLNHPNIVKLFEVI--ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR 116
Query: 131 KWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSII 190
+Q++ ++Y H+ I+HRDL N+ ++ ++ +KI D GF+ + +
Sbjct: 117 AKFRQIVSAVQY--CHQKFIVHRDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDTFC 173
Query: 191 GTPEYMAPELYEEDYTE--MVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQ 248
G+P Y APEL++ + VD++S G+ L +V+ +P+ + ++ ++ ++V G
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRI 232
Query: 249 ALNKVKDPE--VKAFIEKCIAQPRARPSASELLKDPFFSELNDDDS-----EPSP 296
D E +K F+ I P R + +++KD + + ++DD EP P
Sbjct: 233 PFYMSTDCENLLKKFL---ILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLP 284
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 134/295 (45%), Gaps = 22/295 (7%)
Query: 13 GEPFVEVDPSGRFGRYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVN 70
G D G Y L +G G KV A G EVA + + + +
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSL--Q 58
Query: 71 RLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALK 130
+L EV++++ L + I+ + V + TL + E + G + Y H + K +
Sbjct: 59 KLFREVRIMKVLNHPNIVKLFEVI--ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR 116
Query: 131 KWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSII 190
+Q++ ++Y H+ I+HRDL N+ ++ ++ +KI D GF+ + +
Sbjct: 117 AKFRQIVSAVQY--CHQKFIVHRDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDTFC 173
Query: 191 GTPEYMAPELYEEDYTE--MVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQ 248
G+P Y APEL++ + VD++S G+ L +V+ +P+ + ++ ++ ++V G
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRI 232
Query: 249 ALNKVKDPE--VKAFIEKCIAQPRARPSASELLKDPFFSELNDDDS-----EPSP 296
D E +K F+ I P R + +++KD + + ++DD EP P
Sbjct: 233 PFYMSTDCENLLKKFL---ILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLP 284
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 125/264 (47%), Gaps = 17/264 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQL-LRTLKNKYIIVC 90
LG GA V + G +A ++R + S++ RL ++ + +RT+ + +
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQ---KRLLMDLDISMRTVDCPFTVTF 115
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRK---KHRHVSIKALKKWSKQVLEGLEYLHTHE 147
Y + + E+ + + Y++ K + + L K + +++ LE+LH+ +
Sbjct: 116 YGALF--REGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS-K 172
Query: 148 PCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE-----LYE 202
+IHRD+ SN+ IN +GQVK+ D G + + S A G YMAPE L +
Sbjct: 173 LSVIHRDVKPSNVLINA-LGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQ 231
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFI 262
+ Y+ DI+S G+ ++E+ + PY + + K+V PQ E F
Sbjct: 232 KGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFT 291
Query: 263 EKCIAQ-PRARPSASELLKDPFFS 285
+C+ + + RP+ EL++ PFF+
Sbjct: 292 SQCLKKNSKERPTYPELMQHPFFT 315
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 118/259 (45%), Gaps = 13/259 (5%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA V R + G+E A + S +L E ++ R L++ I+ +
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF--QKLEREARICRKLQHPNIVRLH 70
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
++ + L F ++ T G L S +Q+LE + Y H++ I+
Sbjct: 71 DSIQEESFHYLVF--DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG--IV 126
Query: 152 HRDLNCSNIFINGNI--GQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEED-YTEM 208
HR+L N+ + VK+ D G A V S A H GTP Y++PE+ ++D Y++
Sbjct: 127 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKP 186
Query: 209 VDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV--KPQALNKVKDPEVKAFIEKCI 266
VDI++ G+ L ++ P+ + D ++Y ++ G P PE K+ I+ +
Sbjct: 187 VDIWACGVILYILLVGYPPFWDEDQ-HRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSML 245
Query: 267 A-QPRARPSASELLKDPFF 284
P+ R +A + LK P+
Sbjct: 246 TVNPKKRITADQALKVPWI 264
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 131/285 (45%), Gaps = 17/285 (5%)
Query: 13 GEPFVEVDPSGRFGRYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVN 70
G D G Y L +G G KV A G EVA + + + +
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL--Q 58
Query: 71 RLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALK 130
+L EV++++ L + I+ + V + TL + E + G + Y H + K +
Sbjct: 59 KLFREVRIMKVLNHPNIVKLFEVI--ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR 116
Query: 131 KWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSII 190
+Q++ ++Y H+ I+HRDL N+ ++ ++ +KI D GF+ + +
Sbjct: 117 AKFRQIVSAVQY--CHQKFIVHRDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDTFC 173
Query: 191 GTPEYMAPELYEEDYTE--MVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQ 248
G+P Y APEL++ + VD++S G+ L +V+ +P+ + ++ ++ ++V G
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRI 232
Query: 249 ALNKVKDPE--VKAFIEKCIAQPRARPSASELLKDPFFSELNDDD 291
D E +K F+ I P R + +++KD + + ++DD
Sbjct: 233 PFYMSTDCENLLKKFL---ILNPSKRGTLEQIMKDRWMNVGHEDD 274
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 133/295 (45%), Gaps = 22/295 (7%)
Query: 13 GEPFVEVDPSGRFGRYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVN 70
G D G Y L +G G KV A G EVA + + + +
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL--Q 58
Query: 71 RLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALK 130
+L EV++++ L + I+ + V + TL + E + G + Y H + K +
Sbjct: 59 KLFREVRIMKVLNHPNIVKLFEVI--ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR 116
Query: 131 KWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSII 190
+Q++ ++Y H+ I+HRDL N+ ++ ++ +KI D GF+ + +
Sbjct: 117 AKFRQIVSAVQY--CHQKFIVHRDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDAFC 173
Query: 191 GTPEYMAPELYEEDYTE--MVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQ 248
G P Y APEL++ + VD++S G+ L +V+ +P+ + ++ ++ ++V G
Sbjct: 174 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRI 232
Query: 249 ALNKVKDPE--VKAFIEKCIAQPRARPSASELLKDPFFSELNDDDS-----EPSP 296
D E +K F+ I P R + +++KD + + ++DD EP P
Sbjct: 233 PFYMSTDCENLLKKFL---ILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLP 284
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 118/258 (45%), Gaps = 13/258 (5%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA V R + G+E A + S +L E ++ R L++ I+ +
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF--QKLEREARICRKLQHPNIVRLH 71
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
++ + L F ++ T G L S +Q+LE + Y H++ I+
Sbjct: 72 DSIQEESFHYLVF--DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG--IV 127
Query: 152 HRDLNCSNIFINGNI--GQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEED-YTEM 208
HR+L N+ + VK+ D G A V S A H GTP Y++PE+ ++D Y++
Sbjct: 128 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKP 187
Query: 209 VDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV--KPQALNKVKDPEVKAFIEKCI 266
VDI++ G+ L ++ P+ + D ++Y ++ G P PE K+ I+ +
Sbjct: 188 VDIWACGVILYILLVGYPPFWDEDQ-HRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSML 246
Query: 267 A-QPRARPSASELLKDPF 283
P+ R +A + LK P+
Sbjct: 247 TVNPKKRITADQALKVPW 264
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 138/279 (49%), Gaps = 41/279 (14%)
Query: 24 RFG---RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLR 80
RFG + +L+GSG +V++A + +G +V+ ++ + EV+ L
Sbjct: 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN--------EKAEREVKALA 59
Query: 81 TLKNKYIIVCYSVW----LDDQHNTLN---------FIT-EVCTSGNLRTYRKKHRHVSI 126
L + I+ W D + ++ N FI E C G L + +K R +
Sbjct: 60 KLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 119
Query: 127 K---ALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 183
AL+ + +Q+ +G++Y+H+ + +I+RDL SNIF+ + QVKIGD G +
Sbjct: 120 DKVLALELF-EQITKGVDYIHSKK--LINRDLKPSNIFLV-DTKQVKIGDFGLVTSLKND 175
Query: 184 HAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVT 242
GT YM+PE + +DY + VD+Y+ GL L E++ + CD+ + K T
Sbjct: 176 GKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHV------CDTAFETSKFFT 229
Query: 243 GGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLK 280
++ ++ + D + K ++K ++ +P RP+ SE+L+
Sbjct: 230 -DLRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILR 267
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 118/259 (45%), Gaps = 13/259 (5%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA V R + G+E A + S +L E ++ R L++ I+ +
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF--QKLEREARICRKLQHPNIVRLH 71
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
++ + L F ++ T G L S +Q+LE + Y H++ I+
Sbjct: 72 DSIQEESFHYLVF--DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG--IV 127
Query: 152 HRDLNCSNIFINGNI--GQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEED-YTEM 208
HR+L N+ + VK+ D G A V S A H GTP Y++PE+ ++D Y++
Sbjct: 128 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKP 187
Query: 209 VDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV--KPQALNKVKDPEVKAFIEKCI 266
VDI++ G+ L ++ P+ + D ++Y ++ G P PE K+ I+ +
Sbjct: 188 VDIWACGVILYILLVGYPPFWDEDQ-HRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSML 246
Query: 267 A-QPRARPSASELLKDPFF 284
P+ R +A + LK P+
Sbjct: 247 TVNPKKRITADQALKVPWI 265
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 125/268 (46%), Gaps = 15/268 (5%)
Query: 19 VDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQL 78
DP F + + +G G+ +V++ D VA +++ E + + E+ +
Sbjct: 19 ADPEELFTKL-ERIGKGSFGEVFKGIDNRTQQVVA---IKIIDLEEAEDEIEDIQQEITV 74
Query: 79 LRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLE 138
L + Y+ Y +L + + L I E G+ + + + K++L+
Sbjct: 75 LSQCDSSYVTKYYGSYL--KGSKLWIIMEYLGGGSALDLLRAGPFDEFQ-IATMLKEILK 131
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAA-HSIIGTPEYMA 197
GL+YLH+ + IHRD+ +N+ ++ G VK+ D G A + + ++ +GTP +MA
Sbjct: 132 GLDYLHSEKK--IHRDIKAANVLLSEQ-GDVKLADFGVAGQLTDTQIKRNTFVGTPFWMA 188
Query: 198 PELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDP 256
PE+ ++ Y DI+S G+ +E+ E P S+ + ++ + P L
Sbjct: 189 PEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLF--LIPKNNPPTLVGDFTK 246
Query: 257 EVKAFIEKCIAQ-PRARPSASELLKDPF 283
K FI+ C+ + P RP+A ELLK F
Sbjct: 247 SFKEFIDACLNKDPSFRPTAKELLKHKF 274
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 127/293 (43%), Gaps = 44/293 (15%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG+G VY+ ++ G+ VA +V+L P R E+ L++ LK++ I+ Y
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIR---EISLMKELKHENIVRLY 69
Query: 92 SVWLDDQHNTLNF---ITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEP 148
V + TL F ++ + RT R + + +K + Q+L+GL + HE
Sbjct: 70 DVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAF--CHEN 127
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS-HAAHSIIGTPEYMAPELY--EEDY 205
I+HRDL N+ IN GQ+K+GD G A G + S + T Y AP++ Y
Sbjct: 128 KILHRDLKPQNLLINKR-GQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTY 186
Query: 206 TEMVDIYSFGLCLLEMVT--------------------MEIPY-SECDSVAKI--YKKVT 242
+ +DI+S G L EM+T M P S SV K+ Y
Sbjct: 187 STSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNI 246
Query: 243 GGVKPQALNKVKDPEVKAFIEKCIA---------QPRARPSASELLKDPFFSE 286
P+ L +V P K ++ + P R SA + L P+F+E
Sbjct: 247 QQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAE 299
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 128/277 (46%), Gaps = 24/277 (8%)
Query: 20 DPSGRFGRY--SDLLGSGAVKKVYRAFDQEEGIEVA---WNQVRLSHFSEDPVLVNRLHS 74
D + G Y D LG G KV + G +VA N+ ++ +V ++
Sbjct: 10 DGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLD----VVGKIRR 65
Query: 75 EVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSK 134
E+Q L+ ++ +II Y V + + + E + G L Y K+ + K ++ +
Sbjct: 66 EIQNLKLFRHPHIIKLYQVI--STPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQ 123
Query: 135 QVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPE 194
Q+L G++Y H H ++HRDL N+ ++ ++ KI D G + ++ G+P
Sbjct: 124 QILSGVDYCHRH--MVVHRDLKPENVLLDAHMN-AKIADFGLSNMMSDGEFLRXSCGSPN 180
Query: 195 YMAPELYEEDYTE--MVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV--KPQAL 250
Y APE+ VDI+S G+ L ++ +P+ + D V ++KK+ G+ PQ L
Sbjct: 181 YAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDD-DHVPTLFKKICDGIFYTPQYL 239
Query: 251 NKVKDPEVKAFIEKCI-AQPRARPSASELLKDPFFSE 286
N P V + ++ + P R + ++ + +F +
Sbjct: 240 N----PSVISLLKHMLQVDPMKRATIKDIREHEWFKQ 272
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 118/259 (45%), Gaps = 13/259 (5%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA V R + G+E A + S +L E ++ R L++ I+ +
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF--QKLEREARICRKLQHPNIVRLH 94
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
++ + L F ++ T G L S +Q+LE + Y H++ I+
Sbjct: 95 DSIQEESFHYLVF--DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN--GIV 150
Query: 152 HRDLNCSNIFINGNI--GQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEED-YTEM 208
HR+L N+ + VK+ D G A V S A H GTP Y++PE+ ++D Y++
Sbjct: 151 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKP 210
Query: 209 VDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV--KPQALNKVKDPEVKAFIEKCI 266
VDI++ G+ L ++ P+ + D ++Y ++ G P PE K+ I+ +
Sbjct: 211 VDIWACGVILYILLVGYPPFWDEDQ-HRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSML 269
Query: 267 A-QPRARPSASELLKDPFF 284
P+ R +A + LK P+
Sbjct: 270 TVNPKKRITADQALKVPWI 288
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 98/179 (54%), Gaps = 16/179 (8%)
Query: 107 EVCTSGNLRTYRKKHRHVSIK---ALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFIN 163
E C G L + +K R + AL+ + +Q+ +G++Y+H+ + +IHRDL SNIF+
Sbjct: 114 EFCDKGTLEQWIEKRRGEKLDKVLALELF-EQITKGVDYIHSKK--LIHRDLKPSNIFLV 170
Query: 164 GNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGLCLLEMV 222
+ QVKIGD G + GT YM+PE + +DY + VD+Y+ GL L E++
Sbjct: 171 -DTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
Query: 223 TMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLK 280
+ CD+ + K T ++ ++ + D + K ++K ++ +P RP+ SE+L+
Sbjct: 230 HV------CDTAFETSKFFT-DLRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILR 281
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 111/237 (46%), Gaps = 19/237 (8%)
Query: 30 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIV 89
D LG G + VY A D I+VA + + ++ L R EV L ++ I+
Sbjct: 17 DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETL-KRFEREVHNSSQLSHQNIVS 75
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPC 149
V D++ + + E L Y + H +S+ ++ Q+L+G++ H H+
Sbjct: 76 MIDV--DEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIK--HAHDMR 131
Query: 150 IIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS--IIGTPEYMAPELYEEDYT- 206
I+HRD+ NI I+ N +KI D G A + + + ++GT +Y +PE + + T
Sbjct: 132 IVHRDIKPQNILIDSN-KTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATD 190
Query: 207 EMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVK----------PQALNKV 253
E DIYS G+ L EM+ E P++ +V+ K + V PQ+L+ V
Sbjct: 191 ECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNV 247
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 132/286 (46%), Gaps = 53/286 (18%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVC 90
+LG GA +V +A + + A ++R H E ++ + SEV LL +L ++Y++
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIR--HTEEK---LSTILSEVMLLASLNHQYVVRY 67
Query: 91 YSVWLDDQH-----------NTLNFITEVCTSGNLRTYRKKH-RHVSIKALKKWS--KQV 136
Y+ WL+ ++ +TL E C + L Y H +++ + + W +Q+
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTL--YDLIHSENLNQQRDEYWRLFRQI 125
Query: 137 LEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV---------------G 181
LE L Y+H+ IIHRDL NIFI+ + VKIGD G A V G
Sbjct: 126 LEALSYIHSQ--GIIHRDLKPMNIFIDES-RNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 182 RSHAAHSIIGTPEYMAPELYEED--YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYK 239
S S IGT Y+A E+ + Y E +D+YS G+ EM+ P+S I K
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILK 239
Query: 240 KVTGGVKPQALNKVKDPEVKAFIEKCIAQ------PRARPSASELL 279
K+ V + D ++K +EK I + P RP A LL
Sbjct: 240 KLR-SVSIEFPPDFDDNKMK--VEKKIIRLLIDHDPNKRPGARTLL 282
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 133/295 (45%), Gaps = 22/295 (7%)
Query: 13 GEPFVEVDPSGRFGRYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVN 70
G D G Y L +G G KV A G EVA + + + +
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSL--Q 58
Query: 71 RLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALK 130
+L EV++++ L + I+ + V + TL + E + G + Y H + K +
Sbjct: 59 KLFREVRIMKVLNHPNIVKLFEVI--ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR 116
Query: 131 KWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSII 190
+Q++ ++Y H+ I+HRDL N+ ++ ++ +KI D GF+ +
Sbjct: 117 AKFRQIVSAVQY--CHQKFIVHRDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDEFC 173
Query: 191 GTPEYMAPELYEEDYTE--MVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQ 248
G+P Y APEL++ + VD++S G+ L +V+ +P+ + ++ ++ ++V G
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRI 232
Query: 249 ALNKVKDPE--VKAFIEKCIAQPRARPSASELLKDPFFSELNDDDS-----EPSP 296
D E +K F+ I P R + +++KD + + ++DD EP P
Sbjct: 233 PFYMSTDCENLLKKFL---ILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLP 284
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 130/291 (44%), Gaps = 41/291 (14%)
Query: 32 LGSGAVKKVYRAFDQEEGIE-VAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYII- 88
+G GA KV++A D + G VA +VR+ E P+ R + ++ L T ++ ++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 89 ---VCYSVWLDDQHNTLNFITEVCTSGNLRTYRKK--HRHVSIKALKKWSKQVLEGLEYL 143
VC +V D+ L + E +L TY K V + +K Q+L GL++L
Sbjct: 79 LFDVC-TVSRTDRETKLTLVFE-HVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL 136
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE-LYE 202
H+H ++HRDL NI + + GQ+K+ D G A I A S++ T Y APE L +
Sbjct: 137 HSHR--VVHRDLKPQNILVTSS-GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ 193
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTG-----------GVKPQ 248
Y VD++S G EM + + S+ D + KI V G + Q
Sbjct: 194 SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL-DVIGLPGEEDWPRDVALPRQ 252
Query: 249 ALNKVKDPEVKAFIE-----------KCIA-QPRARPSASELLKDPFFSEL 287
A + ++ F+ KC+ P R SA L P+F +L
Sbjct: 253 AFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL 303
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 87/153 (56%), Gaps = 7/153 (4%)
Query: 132 WSKQVLEGLEYLHTHEP-CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSII 190
W Q +G+ YLH+ +P +IHRDL N+ + +KI D G A + ++H ++
Sbjct: 108 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI-QTHMTNNK- 165
Query: 191 GTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVA-KIYKKVTGGVKPQ 248
G+ +MAPE++E +Y+E D++S+G+ L E++T P+ E A +I V G +P
Sbjct: 166 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP 225
Query: 249 ALNKVKDPEVKAFIEKCIAQ-PRARPSASELLK 280
+ + P +++ + +C ++ P RPS E++K
Sbjct: 226 LIKNLPKP-IESLMTRCWSKDPSQRPSMEEIVK 257
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 87/153 (56%), Gaps = 7/153 (4%)
Query: 132 WSKQVLEGLEYLHTHEP-CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSII 190
W Q +G+ YLH+ +P +IHRDL N+ + +KI D G A + ++H ++
Sbjct: 107 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI-QTHMTNNK- 164
Query: 191 GTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVA-KIYKKVTGGVKPQ 248
G+ +MAPE++E +Y+E D++S+G+ L E++T P+ E A +I V G +P
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP 224
Query: 249 ALNKVKDPEVKAFIEKCIAQ-PRARPSASELLK 280
+ + P +++ + +C ++ P RPS E++K
Sbjct: 225 LIKNLPKP-IESLMTRCWSKDPSQRPSMEEIVK 256
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 130/292 (44%), Gaps = 41/292 (14%)
Query: 32 LGSGAVKKVYRAFDQEEGIE-VAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYII- 88
+G GA KV++A D + G VA +VR+ E P+ R + ++ L T ++ ++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 89 ---VCYSVWLDDQHNTLNFITEVCTSGNLRTYRKK--HRHVSIKALKKWSKQVLEGLEYL 143
VC +V D+ L + E +L TY K V + +K Q+L GL++L
Sbjct: 79 LFDVC-TVSRTDRETKLTLVFE-HVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL 136
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE-LYE 202
H+H ++HRDL NI + + GQ+K+ D G A I A S++ T Y APE L +
Sbjct: 137 HSHR--VVHRDLKPQNILVTSS-GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ 193
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTG-----------GVKPQ 248
Y VD++S G EM + + S+ D + KI V G + Q
Sbjct: 194 SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL-DVIGLPGEEDWPRDVALPRQ 252
Query: 249 ALNKVKDPEVKAFIE-----------KCIA-QPRARPSASELLKDPFFSELN 288
A + ++ F+ KC+ P R SA L P+F +L
Sbjct: 253 AFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE 304
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 130/279 (46%), Gaps = 20/279 (7%)
Query: 27 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
R +G G KV A G EVA + + + + +L EV++++ L +
Sbjct: 10 RLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL--QKLFREVRIMKVLNHPN 67
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
I+ + V + TL + E + G + Y H + K + +Q++ ++Y H
Sbjct: 68 IVKLFEVI--ETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQY--CH 123
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEEDYT 206
+ I+HRDL N+ ++ ++ +KI D GF+ + + G+P Y APEL++
Sbjct: 124 QKFIVHRDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKY 182
Query: 207 E--MVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPE--VKAFI 262
+ VD++S G+ L +V+ +P+ + ++ ++ ++V G D E +K F+
Sbjct: 183 DGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFL 241
Query: 263 EKCIAQPRARPSASELLKDPFFSELNDDDS-----EPSP 296
I P R + +++KD + + ++DD EP P
Sbjct: 242 ---ILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLP 277
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 124/264 (46%), Gaps = 17/264 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQL-LRTLKNKYIIVC 90
LG GA V + G +A ++R + S++ RL ++ + +RT+ + +
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQ---KRLLMDLDISMRTVDCPFTVTF 71
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRK---KHRHVSIKALKKWSKQVLEGLEYLHTHE 147
Y + + E+ + + Y++ K + + L K + +++ LE+LH+ +
Sbjct: 72 YGALF--REGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS-K 128
Query: 148 PCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE-----LYE 202
+IHRD+ SN+ IN +GQVK+ D G + + A G YMAPE L +
Sbjct: 129 LSVIHRDVKPSNVLINA-LGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQ 187
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFI 262
+ Y+ DI+S G+ ++E+ + PY + + K+V PQ E F
Sbjct: 188 KGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFT 247
Query: 263 EKCIAQ-PRARPSASELLKDPFFS 285
+C+ + + RP+ EL++ PFF+
Sbjct: 248 SQCLKKNSKERPTYPELMQHPFFT 271
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 127/269 (47%), Gaps = 15/269 (5%)
Query: 27 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
R +G G KV A G EVA + + +P + +L EV++++ L +
Sbjct: 15 RLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL--NPTSLQKLFREVRIMKILNHPN 72
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
I+ + V + TL I E + G + Y H + K + +Q++ ++Y H
Sbjct: 73 IVKLFEVI--ETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQY--CH 128
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEEDYT 206
+ I+HRDL N+ ++ ++ +KI D GF+ + G+P Y APEL++
Sbjct: 129 QKRIVHRDLKAENLLLDADM-NIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKY 187
Query: 207 E--MVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPE--VKAFI 262
+ VD++S G+ L +V+ +P+ + ++ ++ ++V G D E +K F+
Sbjct: 188 DGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFL 246
Query: 263 EKCIAQPRARPSASELLKDPFFSELNDDD 291
+ P R + +++KD + + +++D
Sbjct: 247 ---VLNPIKRGTLEQIMKDRWINAGHEED 272
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 92/174 (52%), Gaps = 9/174 (5%)
Query: 69 VNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKA 128
V + E +L + + +II + + D Q + I + G L + +K +
Sbjct: 50 VEHTNDERLMLSIVTHPFIIRMWGTFQDAQQ--IFMIMDYIEGGELFSLLRKSQRFPNPV 107
Query: 129 LKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS 188
K ++ +V LEYLH+ + II+RDL NI ++ N G +KI D GFA V +
Sbjct: 108 AKFYAAEVCLALEYLHSKD--IIYRDLKPENILLDKN-GHIKITDFGFAKYV--PDVTYX 162
Query: 189 IIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV 241
+ GTP+Y+APE+ + Y + +D +SFG+ + EM+ P+ + +++ K Y+K+
Sbjct: 163 LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM-KTYEKI 215
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 109/239 (45%), Gaps = 13/239 (5%)
Query: 20 DPSGRFGRY--SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQ 77
D + G Y D LG G KV Q G +VA + V V ++ E+Q
Sbjct: 5 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDV-VGKIKREIQ 63
Query: 78 LLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVL 137
L+ ++ +II Y V + E + G L Y KH V ++ +Q+L
Sbjct: 64 NLKLFRHPHIIKLYQVI--STPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQIL 121
Query: 138 EGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMA 197
++Y H H ++HRDL N+ ++ ++ KI D G + ++ + G+P Y A
Sbjct: 122 SAVDYCHRH--MVVHRDLKPENVLLDAHM-NAKIADFGLSNMMSDGEFLRTSCGSPNYAA 178
Query: 198 PELYEEDYTEM--VDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV--KPQALNK 252
PE+ VDI+S G+ L ++ +P+ + + V ++KK+ GGV P+ LN+
Sbjct: 179 PEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD-EHVPTLFKKIRGGVFYIPEYLNR 236
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 117/261 (44%), Gaps = 14/261 (5%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA V R G E A + S +L E ++ R LK+ I+ +
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDH--QKLEREARICRLLKHPNIVRLH 87
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
++ H+ L F ++ T G L + S +Q+LE + LH H+ ++
Sbjct: 88 DSISEEGHHYLIF--DLVTGGELFEDIVAREYYSEADASHCIQQILEAV--LHCHQMGVV 143
Query: 152 HRDLNCSNIFINGNI--GQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPELYEED-YTE 207
HRDL N+ + + VK+ D G A V G A GTP Y++PE+ +D Y +
Sbjct: 144 HRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGK 203
Query: 208 MVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVK--PQALNKVKDPEVKAFIEKC 265
VD+++ G+ L ++ P+ + D ++Y+++ G P PE K I K
Sbjct: 204 PVDLWACGVILYILLVGYPPFWDEDQ-HRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKM 262
Query: 266 IA-QPRARPSASELLKDPFFS 285
+ P R +A+E LK P+ S
Sbjct: 263 LTINPSKRITAAEALKHPWIS 283
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 140/308 (45%), Gaps = 52/308 (16%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 87
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 145
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIG---TPEYMA 197
+Y+H+ + IIHRDL SN+ +N + ++KI D G A H A + G T Y A
Sbjct: 146 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLA-----RHTADEMTGYVATRWYRA 197
Query: 198 PELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKV 253
PE+ Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257
Query: 254 KDPEVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSE 286
+ +I+ P+ R +A++ L +F++
Sbjct: 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
Query: 287 LNDDDSEP 294
+D D EP
Sbjct: 318 YHDPDDEP 325
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 140/308 (45%), Gaps = 52/308 (16%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 87
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 145
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIG---TPEYMA 197
+Y+H+ + IIHRDL SN+ +N + ++KI D G A H A + G T Y A
Sbjct: 146 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLA-----RHTADEMTGYVATRWYRA 197
Query: 198 PELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKV 253
PE+ Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257
Query: 254 KDPEVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSE 286
+ +I+ P+ R +A++ L +F++
Sbjct: 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
Query: 287 LNDDDSEP 294
+D D EP
Sbjct: 318 YHDPDDEP 325
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKXQK-LTDDHVQFLIYQILRGL 138
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-XELKILDFGLARHTDDEMTGY--VATRWYRAPEI 193
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 290 DDSEP 294
D EP
Sbjct: 314 PDDEP 318
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 140/308 (45%), Gaps = 52/308 (16%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 87
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 145
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIG---TPEYMA 197
+Y+H+ + IIHRDL SN+ +N + ++KI D G A H A + G T Y A
Sbjct: 146 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLA-----RHTADEMTGYVATRWYRA 197
Query: 198 PELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKV 253
PE+ Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257
Query: 254 KDPEVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSE 286
+ +I+ P+ R +A++ L +F++
Sbjct: 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
Query: 287 LNDDDSEP 294
+D D EP
Sbjct: 318 YHDPDDEP 325
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 13/239 (5%)
Query: 20 DPSGRFGRY--SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQ 77
D + G Y D LG G KV Q G +VA + V V ++ E+Q
Sbjct: 5 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDV-VGKIKREIQ 63
Query: 78 LLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVL 137
L+ ++ +II Y V + E + G L Y KH V ++ +Q+L
Sbjct: 64 NLKLFRHPHIIKLYQVI--STPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQIL 121
Query: 138 EGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMA 197
++Y H H ++HRDL N+ ++ ++ KI D G + ++ G+P Y A
Sbjct: 122 SAVDYCHRH--MVVHRDLKPENVLLDAHM-NAKIADFGLSNMMSDGEFLRDSCGSPNYAA 178
Query: 198 PELYEEDYTEM--VDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV--KPQALNK 252
PE+ VDI+S G+ L ++ +P+ + + V ++KK+ GGV P+ LN+
Sbjct: 179 PEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD-EHVPTLFKKIRGGVFYIPEYLNR 236
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 134/303 (44%), Gaps = 42/303 (13%)
Query: 28 YSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNK 85
Y DL +GSGA V A D G +VA ++ SE + R + E++LL+ ++++
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSE--LFAKRAYRELRLLKHMRHE 84
Query: 86 YIIVCYSVWLDDQ--HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYL 143
+I V+ D+ + +F + G KH + ++ Q+L+GL Y+
Sbjct: 85 NVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYI 144
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE--LY 201
H IIHRDL N+ +N + ++KI D G A + T Y APE L
Sbjct: 145 HA--AGIIHRDLKPGNLAVNEDC-ELKILDFGLARQADSEMXGXVV--TRWYRAPEVILN 199
Query: 202 EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYK--KVTGGVKPQALNKVKDPEVK 259
YT+ VDI+S G + EM+T + + D + ++ + KVTG + + +++ E K
Sbjct: 200 WMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK 259
Query: 260 AFIEKCI-------------AQPRA--------------RPSASELLKDPFFSELNDDDS 292
+++ A P A R +A E L P+F L+D +
Sbjct: 260 NYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTED 319
Query: 293 EPS 295
EP
Sbjct: 320 EPQ 322
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 129/278 (46%), Gaps = 17/278 (6%)
Query: 20 DPSGRFGRYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQ 77
D G Y L +G G KV A G EVA + + +P + +L EV+
Sbjct: 9 DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL--NPTSLQKLFREVR 66
Query: 78 LLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVL 137
+++ L + I+ + V + TL I E + G + Y H + K + +Q++
Sbjct: 67 IMKILNHPNIVKLFEVI--ETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV 124
Query: 138 EGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMA 197
++Y H+ I+HRDL N+ ++ ++ +KI D GF+ + G P Y A
Sbjct: 125 SAVQY--CHQKRIVHRDLKAENLLLDADM-NIKIADFGFSNEFTVGGKLDAFCGAPPYAA 181
Query: 198 PELYEEDYTE--MVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKD 255
PEL++ + VD++S G+ L +V+ +P+ + ++ ++ ++V G D
Sbjct: 182 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTD 240
Query: 256 PE--VKAFIEKCIAQPRARPSASELLKDPFFSELNDDD 291
E +K F+ + P R + +++KD + + +++D
Sbjct: 241 CENLLKRFL---VLNPIKRGTLEQIMKDRWINAGHEED 275
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 107/218 (49%), Gaps = 17/218 (7%)
Query: 32 LGSGAVKKVYRAFDQEEGIE-VAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYII- 88
+G GA KV++A D + G VA +VR+ E P+ R + ++ L T ++ ++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 89 ---VCYSVWLDDQHNTLNFITEVCTSGNLRTYRKK--HRHVSIKALKKWSKQVLEGLEYL 143
VC +V D+ L + E +L TY K V + +K Q+L GL++L
Sbjct: 79 LFDVC-TVSRTDRETKLTLVFE-HVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL 136
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE-LYE 202
H+H ++HRDL NI + + GQ+K+ D G A I A S++ T Y APE L +
Sbjct: 137 HSHR--VVHRDLKPQNILVTSS-GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ 193
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKI 237
Y VD++S G EM + + S+ D + KI
Sbjct: 194 SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKI 231
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKXQK-LTDDHVQFLIYQILRGL 138
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 193
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 290 DDSEP 294
D EP
Sbjct: 314 PDDEP 318
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 123/262 (46%), Gaps = 16/262 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+GSG +V++ ++ G +A Q+R S E+ + L +L++ YI+ C+
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRI--LMDLDVVLKSHDCPYIVQCF 90
Query: 92 SVWLDDQHNTLNFIT-EVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCI 150
++ NT FI E+ + + ++ + + L K + +++ L YL +
Sbjct: 91 GTFIT---NTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHG-V 146
Query: 151 IHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEE------D 204
IHRD+ SNI ++ GQ+K+ D G + + A G YMAPE + D
Sbjct: 147 IHRDVKPSNILLDER-GQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPD 205
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIE 263
Y D++S G+ L+E+ T + PY C + ++ KV P + + ++F++
Sbjct: 206 YDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVK 265
Query: 264 KCIAQP-RARPSASELLKDPFF 284
C+ + R RP ++LL+ F
Sbjct: 266 DCLTKDHRKRPKYNKLLEHSFI 287
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 82
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 140
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 141 KYIHSAD--IIHRDLKPSNLAVNED-SELKILDFGLARHTDDEMTGY--VATRWYRAPEI 195
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 255
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 256 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 315
Query: 290 DDSEP 294
D EP
Sbjct: 316 PDDEP 320
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 86
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 144
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 145 KYIHSAD--IIHRDLKPSNLAVNED-SELKILDFGLARHTDDEMTGY--VATRWYRAPEI 199
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 259
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 260 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 319
Query: 290 DDSEP 294
D EP
Sbjct: 320 PDDEP 324
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 138
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE- 199
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 193
Query: 200 -LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
L Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 194 MLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 290 DDSEP 294
D EP
Sbjct: 314 PDDEP 318
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 127/273 (46%), Gaps = 19/273 (6%)
Query: 28 YSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN-KY 86
Y LLG G KV ++ G A +R E + + + V R L+N ++
Sbjct: 12 YLKLLGKGTFGKVILVREKATGRYYAMKILR----KEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
+ + H+ L F+ E G L + + R + + + + +++ LEYLH+
Sbjct: 68 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 127
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAI-VGRSHAAHSIIGTPEYMAPELYEE-D 204
+ +++RD+ N+ ++ + G +KI D G + + GTPEY+APE+ E+ D
Sbjct: 128 D--VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND 184
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK 264
Y VD + G+ + EM+ +P+ D ++++ + ++ + PE K+ +
Sbjct: 185 YGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELIL--MEEIRFPRTLSPEAKSLLAG 241
Query: 265 CIAQ-PRAR----PS-ASELLKDPFFSELNDDD 291
+ + P+ R PS A E+++ FF +N D
Sbjct: 242 LLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQD 274
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 127/273 (46%), Gaps = 19/273 (6%)
Query: 28 YSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN-KY 86
Y LLG G KV ++ G A +R E + + + V R L+N ++
Sbjct: 9 YLKLLGKGTFGKVILVREKATGRYYAMKILR----KEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
+ + H+ L F+ E G L + + R + + + + +++ LEYLH+
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA-IVGRSHAAHSIIGTPEYMAPELYEE-D 204
+ +++RD+ N+ ++ + G +KI D G + + GTPEY+APE+ E+ D
Sbjct: 125 D--VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND 181
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK 264
Y VD + G+ + EM+ +P+ D ++++ + ++ + PE K+ +
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELIL--MEEIRFPRTLSPEAKSLLAG 238
Query: 265 CIAQ-PRAR----PS-ASELLKDPFFSELNDDD 291
+ + P+ R PS A E+++ FF +N D
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQD 271
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 127/273 (46%), Gaps = 19/273 (6%)
Query: 28 YSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN-KY 86
Y LLG G KV ++ G A +R E + + + V R L+N ++
Sbjct: 9 YLKLLGKGTFGKVILVREKATGRYYAMKILR----KEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
+ + H+ L F+ E G L + + R + + + + +++ LEYLH+
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAI-VGRSHAAHSIIGTPEYMAPELYEE-D 204
+ +++RD+ N+ ++ + G +KI D G + + GTPEY+APE+ E+ D
Sbjct: 125 D--VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND 181
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK 264
Y VD + G+ + EM+ +P+ D ++++ + ++ + PE K+ +
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELIL--MEEIRFPRTLSPEAKSLLAG 238
Query: 265 CIAQ-PRAR----PS-ASELLKDPFFSELNDDD 291
+ + P+ R PS A E+++ FF +N D
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQD 271
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 123/259 (47%), Gaps = 17/259 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG G+ KV A + +VA + + + + R+ E+ L+ L++ +II Y
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHM-RVEREISYLKLLRHPHIIKLY 75
Query: 92 SVWLDDQHNTLNFITEVC--TSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPC 149
V T I V G L Y + + ++ +++ +Q++ +EY H H+
Sbjct: 76 DVI-----TTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK-- 128
Query: 150 IIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEEDYTE-- 207
I+HRDL N+ ++ N+ VKI D G + I+ + + G+P Y APE+
Sbjct: 129 IVHRDLKPENLLLDDNLN-VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGP 187
Query: 208 MVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCI- 266
VD++S G+ L M+ +P+ + + + ++KKV V + P ++ I + I
Sbjct: 188 EVDVWSCGIVLYVMLVGRLPFDD-EFIPNLFKKVNSCV--YVMPDFLSPGAQSLIRRMIV 244
Query: 267 AQPRARPSASELLKDPFFS 285
A P R + E+ +DP+F+
Sbjct: 245 ADPMQRITIQEIRRDPWFN 263
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 100
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 158
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 159 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 213
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 273
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 274 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 333
Query: 290 DDSEP 294
D EP
Sbjct: 334 PDDEP 338
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 28 RYQNLSPIGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 85
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 143
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 144 KYIHSAD--IIHRDLKPSNLAVNED-XELKILDFGLARHTDDEMTGY--VATRWYRAPEI 198
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 258
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 259 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 318
Query: 290 DDSEP 294
D EP
Sbjct: 319 PDDEP 323
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 21 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 78
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 79 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 136
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 137 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 191
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 192 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 251
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 252 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 311
Query: 290 DDSEP 294
D EP
Sbjct: 312 PDDEP 316
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 99
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 157
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 158 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 212
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 272
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 273 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 332
Query: 290 DDSEP 294
D EP
Sbjct: 333 PDDEP 337
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 103
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 161
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 162 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 216
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 217 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 276
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 277 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 336
Query: 290 DDSEP 294
D EP
Sbjct: 337 PDDEP 341
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 138
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 193
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 290 DDSEP 294
D EP
Sbjct: 314 PDDEP 318
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 138
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 193
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 290 DDSEP 294
D EP
Sbjct: 314 PDDEP 318
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 82
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 140
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 141 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 195
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 255
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 256 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 315
Query: 290 DDSEP 294
D EP
Sbjct: 316 PDDEP 320
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 91
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 149
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 150 KYIHSAD--IIHRDLKPSNLAVNEDX-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 204
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 205 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 264
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 265 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 324
Query: 290 DDSEP 294
D EP
Sbjct: 325 PDDEP 329
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 85
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 143
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 144 KYIHSAD--IIHRDLKPSNLAVNED-XELKILDFGLARHTDDEMTGY--VATRWYRAPEI 198
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 258
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 259 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 318
Query: 290 DDSEP 294
D EP
Sbjct: 319 PDDEP 323
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 92
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 150
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 151 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 205
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 265
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 266 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 325
Query: 290 DDSEP 294
D EP
Sbjct: 326 PDDEP 330
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 138
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 193
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 290 DDSEP 294
D EP
Sbjct: 314 PDDEP 318
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 92
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 150
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 151 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 205
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 265
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 266 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 325
Query: 290 DDSEP 294
D EP
Sbjct: 326 PDDEP 330
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 77
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 135
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 136 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 190
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 250
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 251 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 310
Query: 290 DDSEP 294
D EP
Sbjct: 311 PDDEP 315
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 91
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 149
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 150 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 204
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 205 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 264
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 265 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 324
Query: 290 DDSEP 294
D EP
Sbjct: 325 PDDEP 329
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 85
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 143
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 144 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 198
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 258
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 259 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 318
Query: 290 DDSEP 294
D EP
Sbjct: 319 PDDEP 323
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 82
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 140
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 141 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 195
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 255
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 256 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 315
Query: 290 DDSEP 294
D EP
Sbjct: 316 PDDEP 320
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 82
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 140
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 141 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 195
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 255
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 256 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 315
Query: 290 DDSEP 294
D EP
Sbjct: 316 PDDEP 320
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 22 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 79
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 80 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 137
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 138 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 192
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 193 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 252
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 253 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 312
Query: 290 DDSEP 294
D EP
Sbjct: 313 PDDEP 317
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 138
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 193
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 290 DDSEP 294
D EP
Sbjct: 314 PDDEP 318
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 76
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 134
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 135 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 189
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 249
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 250 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309
Query: 290 DDSEP 294
D EP
Sbjct: 310 PDDEP 314
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 138
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 193
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 290 DDSEP 294
D EP
Sbjct: 314 PDDEP 318
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 86
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 144
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 145 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 199
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 259
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 260 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 319
Query: 290 DDSEP 294
D EP
Sbjct: 320 PDDEP 324
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 138
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 193
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 290 DDSEP 294
D EP
Sbjct: 314 PDDEP 318
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 137/305 (44%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKSQK-LTDDHVQFLIYQILRGL 138
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G + + T Y APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-SELKILDFGLCRHTDDEMTGY--VATRWYRAPEI 193
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 290 DDSEP 294
D EP
Sbjct: 314 PDDEP 318
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 85
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 143
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 144 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 198
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 258
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 259 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 318
Query: 290 DDSEP 294
D EP
Sbjct: 319 PDDEP 323
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 87
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 145
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 146 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 200
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 260
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 261 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 320
Query: 290 DDSEP 294
D EP
Sbjct: 321 PDDEP 325
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 138
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 193
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 290 DDSEP 294
D EP
Sbjct: 314 PDDEP 318
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 77
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 135
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 136 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 190
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 250
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 251 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 310
Query: 290 DDSEP 294
D EP
Sbjct: 311 PDDEP 315
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 86
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 144
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 145 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 199
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 259
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 260 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 319
Query: 290 DDSEP 294
D EP
Sbjct: 320 PDDEP 324
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 140/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY L +GSGA V ++D + G+++A +LS + + R + E++LL+ +K+
Sbjct: 52 RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 109
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 110 ENVIGLLDVFTPATSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 167
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE- 199
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE
Sbjct: 168 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 222
Query: 200 -LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYK--KVTGGVKPQALNKVKDP 256
L Y VDI+S G + E++T + D + ++ + ++TG ++++
Sbjct: 223 MLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSH 282
Query: 257 EVKAFIEKCIAQPR---------------------------ARPSASELLKDPFFSELND 289
E + +I P+ R +ASE L P+FS+ +D
Sbjct: 283 EARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQYHD 342
Query: 290 DDSEP 294
D EP
Sbjct: 343 PDDEP 347
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSKPFQSIIHAKRTYRELRLLKHMKH 92
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 150
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 151 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 205
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 265
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 266 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 325
Query: 290 DDSEP 294
D EP
Sbjct: 326 PDDEP 330
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 126/273 (46%), Gaps = 19/273 (6%)
Query: 28 YSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN-KY 86
Y LLG G KV ++ G A +R E + + + V R L+N ++
Sbjct: 14 YLKLLGKGTFGKVILVREKATGRYYAMKILR----KEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
+ + H+ L F+ E G L + + R + + + + +++ LEYLH+
Sbjct: 70 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 129
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAI-VGRSHAAHSIIGTPEYMAPELYEE-D 204
+ +++RD+ N+ ++ + G +KI D G + GTPEY+APE+ E+ D
Sbjct: 130 D--VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND 186
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK 264
Y VD + G+ + EM+ +P+ D ++++ + ++ + PE K+ +
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELIL--MEEIRFPRTLSPEAKSLLAG 243
Query: 265 CIAQ-PRAR----PS-ASELLKDPFFSELNDDD 291
+ + P+ R PS A E+++ FF +N D
Sbjct: 244 LLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQD 276
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 103
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 161
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 162 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMXGY--VATRWYRAPEI 216
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 217 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 276
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 277 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 336
Query: 290 DDSEP 294
D EP
Sbjct: 337 PDDEP 341
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 126/273 (46%), Gaps = 19/273 (6%)
Query: 28 YSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN-KY 86
Y LLG G KV ++ G A +R E + + + V R L+N ++
Sbjct: 9 YLKLLGKGTFGKVILVREKATGRYYAMKILR----KEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
+ + H+ L F+ E G L + + R + + + + +++ LEYLH+
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAI-VGRSHAAHSIIGTPEYMAPELYEE-D 204
+ +++RD+ N+ ++ + G +KI D G + GTPEY+APE+ E+ D
Sbjct: 125 D--VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK 264
Y VD + G+ + EM+ +P+ D ++++ + ++ + PE K+ +
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELIL--MEEIRFPRTLSPEAKSLLAG 238
Query: 265 CIAQ-PRAR----PS-ASELLKDPFFSELNDDD 291
+ + P+ R PS A E+++ FF +N D
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQD 271
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 126/273 (46%), Gaps = 19/273 (6%)
Query: 28 YSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN-KY 86
Y LLG G KV ++ G A +R E + + + V R L+N ++
Sbjct: 9 YLKLLGKGTFGKVILVREKATGRYYAMKILR----KEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
+ + H+ L F+ E G L + + R + + + + +++ LEYLH+
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAI-VGRSHAAHSIIGTPEYMAPELYEE-D 204
+ +++RD+ N+ ++ + G +KI D G + GTPEY+APE+ E+ D
Sbjct: 125 D--VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK 264
Y VD + G+ + EM+ +P+ D ++++ + ++ + PE K+ +
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELIL--MEEIRFPRTLSPEAKSLLAG 238
Query: 265 CIAQ-PRAR----PS-ASELLKDPFFSELNDDD 291
+ + P+ R PS A E+++ FF +N D
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQD 271
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 122/269 (45%), Gaps = 18/269 (6%)
Query: 30 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNR-LHSEVQLLRTLKNKYII 88
+++G GA V R ++E G + A V ++ F+ P L L E + LK+ +I+
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 89 VCYSVWLDDQHNTLNFITEVCTSGNL---RTYRKKHRHVSIKALKK-WSKQVLEGLEYLH 144
+ D L + E +L R V +A+ + +Q+LE L Y H
Sbjct: 90 ELLETYSSD--GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 145 THEPCIIHRDLNCSNIFING--NIGQVKIGDLGFAAIVGRSH-AAHSIIGTPEYMAPELY 201
+ IIHRD+ N+ + N VK+GD G A +G S A +GTP +MAPE+
Sbjct: 148 DNN--IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 202 E-EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG---VKPQALNKVKDPE 257
+ E Y + VD++ G+ L +++ +P+ + ++++ + G + P+ + + +
Sbjct: 206 KREPYGKPVDVWGCGVILFILLSGCLPFY--GTKERLFEGIIKGKYKMNPRQWSHISESA 263
Query: 258 VKAFIEKCIAQPRARPSASELLKDPFFSE 286
+ P R + E L P+ E
Sbjct: 264 KDLVRRMLMLDPAERITVYEALNHPWLKE 292
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 126/273 (46%), Gaps = 19/273 (6%)
Query: 28 YSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN-KY 86
Y LLG G KV ++ G A +R E + + + V R L+N ++
Sbjct: 9 YLKLLGKGTFGKVILVREKATGRYYAMKILR----KEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
+ + H+ L F+ E G L + + R + + + + +++ LEYLH+
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAI-VGRSHAAHSIIGTPEYMAPELYEE-D 204
+ +++RD+ N+ ++ + G +KI D G + GTPEY+APE+ E+ D
Sbjct: 125 D--VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK 264
Y VD + G+ + EM+ +P+ D ++++ + ++ + PE K+ +
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELIL--MEEIRFPRTLSPEAKSLLAG 238
Query: 265 CIAQ-PRAR----PS-ASELLKDPFFSELNDDD 291
+ + P+ R PS A E+++ FF +N D
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQD 271
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 138
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDYGLARHTDDEMTGY--VATRWYRAPEI 193
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 290 DDSEP 294
D EP
Sbjct: 314 PDDEP 318
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 14/261 (5%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA V R G E A + S +L E ++ R LK+ I+ +
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDH--QKLEREARICRLLKHPNIVRLH 76
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
++ H+ L F ++ T G L + S +Q+LE + LH H+ ++
Sbjct: 77 DSISEEGHHYLIF--DLVTGGELFEDIVAREYYSEADASHCIQQILEAV--LHCHQMGVV 132
Query: 152 HRDLNCSNIFINGNI--GQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPELYEED-YTE 207
HR+L N+ + + VK+ D G A V G A GTP Y++PE+ +D Y +
Sbjct: 133 HRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGK 192
Query: 208 MVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVK--PQALNKVKDPEVKAFIEKC 265
VD+++ G+ L ++ P+ + D ++Y+++ G P PE K I K
Sbjct: 193 PVDLWACGVILYILLVGYPPFWDEDQ-HRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKM 251
Query: 266 IA-QPRARPSASELLKDPFFS 285
+ P R +A+E LK P+ S
Sbjct: 252 LTINPSKRITAAEALKHPWIS 272
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 138
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDAGLARHTDDEMTGY--VATRWYRAPEI 193
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 290 DDSEP 294
D EP
Sbjct: 314 PDDEP 318
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 137/305 (44%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G VA +LS + + R + E++LL+ +K+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 138
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A A + T Y APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMAG--FVATRWYRAPEI 193
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 290 DDSEP 294
D EP
Sbjct: 314 PDDEP 318
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 139/308 (45%), Gaps = 52/308 (16%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 138
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIG---TPEYMA 197
+Y+H+ + IIHRDL SN+ +N + ++KI D G A H + G T Y A
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLA-----RHTDDEMTGXVATRWYRA 190
Query: 198 PELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKV 253
PE+ Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 254 KDPEVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSE 286
+ +I+ P+ R +A++ L +F++
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 287 LNDDDSEP 294
+D D EP
Sbjct: 311 YHDPDDEP 318
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 137/305 (44%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G VA +LS + + R + E++LL+ +K+
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 76
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 134
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A A + T Y APE+
Sbjct: 135 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMAG--FVATRWYRAPEI 189
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 249
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 250 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309
Query: 290 DDSEP 294
D EP
Sbjct: 310 PDDEP 314
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 107/235 (45%), Gaps = 30/235 (12%)
Query: 3 AANSNMSDRDGEPFVEVDPSGRFGRYSDLLGSGAVKKV----YRAFDQEEGIEVAWNQVR 58
A S DRD F E R ++ LG G V Y G VA +
Sbjct: 25 AMGSAFEDRDPTQFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK--K 77
Query: 59 LSHFSEDPVLVNRLHSEVQLLRTLKN----KYIIVCYSVWLDDQHNTLNFITEVCTSGNL 114
L H +E+ + E+++L++L++ KY VCYS L I E G+L
Sbjct: 78 LQHSTEEHL--RDFEREIEILKSLQHDNIVKYKGVCYSAG----RRNLKLIMEYLPYGSL 131
Query: 115 RTYRKKHR-HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGD 173
R Y +KH+ + L +++ Q+ +G+EYL T IHRDL NI + N +VKIGD
Sbjct: 132 RDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGD 188
Query: 174 LGFAAIVGRSHAAHSIIGTPE----YMAPE-LYEEDYTEMVDIYSFGLCLLEMVT 223
G ++ + + E + APE L E ++ D++SFG+ L E+ T
Sbjct: 189 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 137/305 (44%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G VA +LS + + R + E++LL+ +K+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 138
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A A + T Y APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMAG--FVATRWYRAPEI 193
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 254 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 290 DDSEP 294
D EP
Sbjct: 314 PDDEP 318
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 138
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDRGLARHTDDEMTGY--VATRWYRAPEI 193
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 290 DDSEP 294
D EP
Sbjct: 314 PDDEP 318
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 124/276 (44%), Gaps = 36/276 (13%)
Query: 28 YSDLLGSGAVKKVYRAFDQEEG---------IEVAWNQVRLSH-FSEDPVLVNRLHSEVQ 77
Y LLG G KV ++ G EV + ++H +E+ VL N H
Sbjct: 155 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP--- 211
Query: 78 LLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVL 137
L LK + H+ L F+ E G L + + R S + + +++
Sbjct: 212 FLTALKYSF----------QTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 261
Query: 138 EGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAA-HSIIGTPEYM 196
L+YLH+ E +++RDL N+ ++ + G +KI D G + A + GTPEY+
Sbjct: 262 SALDYLHS-EKNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKTFCGTPEYL 319
Query: 197 APELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKD 255
APE+ E+ DY VD + G+ + EM+ +P+ D K+++ + ++ +
Sbjct: 320 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELIL--MEEIRFPRTLG 376
Query: 256 PEVKAFIEKCIAQ-PRAR-----PSASELLKDPFFS 285
PE K+ + + + P+ R A E+++ FF+
Sbjct: 377 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFA 412
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 124/276 (44%), Gaps = 36/276 (13%)
Query: 28 YSDLLGSGAVKKVYRAFDQEEG---------IEVAWNQVRLSH-FSEDPVLVNRLHSEVQ 77
Y LLG G KV ++ G EV + ++H +E+ VL N H
Sbjct: 152 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP--- 208
Query: 78 LLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVL 137
L LK + H+ L F+ E G L + + R S + + +++
Sbjct: 209 FLTALKYSF----------QTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 258
Query: 138 EGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAA-HSIIGTPEYM 196
L+YLH+ E +++RDL N+ ++ + G +KI D G + A + GTPEY+
Sbjct: 259 SALDYLHS-EKNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKTFCGTPEYL 316
Query: 197 APELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKD 255
APE+ E+ DY VD + G+ + EM+ +P+ D K+++ + ++ +
Sbjct: 317 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELIL--MEEIRFPRTLG 373
Query: 256 PEVKAFIEKCIAQ-PRAR-----PSASELLKDPFFS 285
PE K+ + + + P+ R A E+++ FF+
Sbjct: 374 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFA 409
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 123/283 (43%), Gaps = 47/283 (16%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVC 90
+LG GA +V +A + + A ++R + +L SEV LL +L ++Y++
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTIL-----SEVXLLASLNHQYVVRY 67
Query: 91 YSVWLDDQH-----------NTLNFITEVCTSGNLRTYRKKH-RHVSIKALKKWS--KQV 136
Y+ WL+ ++ +TL E C + L Y H +++ + + W +Q+
Sbjct: 68 YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTL--YDLIHSENLNQQRDEYWRLFRQI 125
Query: 137 LEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV---------------G 181
LE L Y+H+ IIHR+L NIFI+ + VKIGD G A V G
Sbjct: 126 LEALSYIHSQ--GIIHRNLKPXNIFIDES-RNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 182 RSHAAHSIIGTPEYMAPELYEED--YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYK 239
S S IGT Y+A E+ + Y E +D YS G+ E + P+S I K
Sbjct: 183 SSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI---YPFSTGXERVNILK 239
Query: 240 KVTGGVK--PQALNKVKDPEVKAFIEKCIAQ-PRARPSASELL 279
K+ P + K K I I P RP A LL
Sbjct: 240 KLRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLL 282
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 138
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDGGLARHTDDEMTGY--VATRWYRAPEI 193
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 290 DDSEP 294
D EP
Sbjct: 314 PDDEP 318
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 137/305 (44%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G+ VA +LS + + R + E++LL+ +K+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 138
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI LGF + T Y APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKI--LGFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 290 DDSEP 294
D EP
Sbjct: 314 PDDEP 318
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 129/295 (43%), Gaps = 22/295 (7%)
Query: 13 GEPFVEVDPSGRFGRYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVN 70
G D G Y L +G G KV A G EVA + + + +
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL--Q 58
Query: 71 RLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALK 130
+L EV++ + L + I+ + V + TL + E + G + Y H K +
Sbjct: 59 KLFREVRIXKVLNHPNIVKLFEVI--ETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEAR 116
Query: 131 KWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSII 190
+Q++ ++Y H+ I+HRDL N+ ++ + +KI D GF+ + +
Sbjct: 117 AKFRQIVSAVQY--CHQKFIVHRDLKAENLLLDADX-NIKIADFGFSNEFTFGNKLDAFC 173
Query: 191 GTPEYMAPELYEEDYTE--MVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQ 248
G P Y APEL++ + VD++S G+ L +V+ +P+ + ++ ++ ++V G
Sbjct: 174 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRI 232
Query: 249 ALNKVKDPE--VKAFIEKCIAQPRARPSASELLKDPFFSELNDDDS-----EPSP 296
D E +K F+ I P R + ++ KD + + ++DD EP P
Sbjct: 233 PFYXSTDCENLLKKFL---ILNPSKRGTLEQIXKDRWXNVGHEDDELKPYVEPLP 284
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 123/276 (44%), Gaps = 36/276 (13%)
Query: 28 YSDLLGSGAVKKVYRAFDQEEG---------IEVAWNQVRLSH-FSEDPVLVNRLHSEVQ 77
Y LLG G KV ++ G EV + ++H +E+ VL N H
Sbjct: 14 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP--- 70
Query: 78 LLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVL 137
L LK + H+ L F+ E G L + + R S + + +++
Sbjct: 71 FLTALKYSF----------QTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 120
Query: 138 EGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAA-HSIIGTPEYM 196
L+YLH+ E +++RDL N+ ++ + G +KI D G + A GTPEY+
Sbjct: 121 SALDYLHS-EKNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKXFCGTPEYL 178
Query: 197 APELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKD 255
APE+ E+ DY VD + G+ + EM+ +P+ D K+++ + ++ +
Sbjct: 179 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELIL--MEEIRFPRTLG 235
Query: 256 PEVKAFIEKCIAQ-PRAR-----PSASELLKDPFFS 285
PE K+ + + + P+ R A E+++ FF+
Sbjct: 236 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFA 271
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 123/276 (44%), Gaps = 36/276 (13%)
Query: 28 YSDLLGSGAVKKVYRAFDQEEG---------IEVAWNQVRLSH-FSEDPVLVNRLHSEVQ 77
Y LLG G KV ++ G EV + ++H +E+ VL N H
Sbjct: 12 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP--- 68
Query: 78 LLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVL 137
L LK + H+ L F+ E G L + + R S + + +++
Sbjct: 69 FLTALKYSF----------QTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 118
Query: 138 EGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAA-HSIIGTPEYM 196
L+YLH+ E +++RDL N+ ++ + G +KI D G + A GTPEY+
Sbjct: 119 SALDYLHS-EKNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKXFCGTPEYL 176
Query: 197 APELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKD 255
APE+ E+ DY VD + G+ + EM+ +P+ D K+++ + ++ +
Sbjct: 177 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELIL--MEEIRFPRTLG 233
Query: 256 PEVKAFIEKCIAQ-PRAR-----PSASELLKDPFFS 285
PE K+ + + + P+ R A E+++ FF+
Sbjct: 234 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFA 269
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 123/276 (44%), Gaps = 36/276 (13%)
Query: 28 YSDLLGSGAVKKVYRAFDQEEG---------IEVAWNQVRLSH-FSEDPVLVNRLHSEVQ 77
Y LLG G KV ++ G EV + ++H +E+ VL N H
Sbjct: 13 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP--- 69
Query: 78 LLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVL 137
L LK + H+ L F+ E G L + + R S + + +++
Sbjct: 70 FLTALKYSF----------QTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 119
Query: 138 EGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAA-HSIIGTPEYM 196
L+YLH+ E +++RDL N+ ++ + G +KI D G + A GTPEY+
Sbjct: 120 SALDYLHS-EKNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKXFCGTPEYL 177
Query: 197 APELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKD 255
APE+ E+ DY VD + G+ + EM+ +P+ D K+++ + ++ +
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELIL--MEEIRFPRTLG 234
Query: 256 PEVKAFIEKCIAQ-PRAR-----PSASELLKDPFFS 285
PE K+ + + + P+ R A E+++ FF+
Sbjct: 235 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFA 270
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 137/305 (44%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G VA +LS + + R + E++LL+ +K+
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 99
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 157
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 158 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 212
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 272
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 273 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 332
Query: 290 DDSEP 294
D EP
Sbjct: 333 PDDEP 337
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 137/305 (44%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G VA +LS + + R + E++LL+ +K+
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 100
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 158
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 159 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 213
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 273
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 274 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 333
Query: 290 DDSEP 294
D EP
Sbjct: 334 PDDEP 338
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 137/305 (44%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G VA +LS + + R + E++LL+ +K+
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 86
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 144
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 145 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 199
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 259
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 260 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 319
Query: 290 DDSEP 294
D EP
Sbjct: 320 PDDEP 324
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 137/305 (44%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G VA +LS + + R + E++LL+ +K+
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 76
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 134
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 135 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 189
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 249
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 250 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309
Query: 290 DDSEP 294
D EP
Sbjct: 310 PDDEP 314
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 137/305 (44%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G VA +LS + + R + E++LL+ +K+
Sbjct: 33 RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 90
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 91 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 148
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 149 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 203
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 204 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 263
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 264 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 323
Query: 290 DDSEP 294
D EP
Sbjct: 324 PDDEP 328
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 137/305 (44%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G VA +LS + + R + E++LL+ +K+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 138
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEI 193
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 254 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 290 DDSEP 294
D EP
Sbjct: 314 PDDEP 318
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 135/308 (43%), Gaps = 52/308 (16%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G VA +LS + + R + E++LL+ +K+
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 76
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTS---GNLRTYRKKHRHVSIKALKKWSKQVL 137
+ +I V+ ++ N + +T + + ++ + HV Q+L
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIY-----QIL 131
Query: 138 EGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMA 197
GL+Y+H+ + IIHRDL SN+ +N + ++KI D G A + + T Y A
Sbjct: 132 RGLKYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRA 186
Query: 198 PELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKV 253
PE+ Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 246
Query: 254 KDPEVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSE 286
+ +I+ P+ R +A++ L +F++
Sbjct: 247 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
Query: 287 LNDDDSEP 294
+D D EP
Sbjct: 307 YHDPDDEP 314
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 121/282 (42%), Gaps = 39/282 (13%)
Query: 28 YSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHS---EVQLLRTLKN 84
Y +G G V++ ++ VA + L + ++ + EV ++ L +
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82
Query: 85 KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQ------VLE 138
I+ Y + HN + E G+L HR + KWS + +
Sbjct: 83 PNIVKLYGL----MHNPPRMVMEFVPCGDLY-----HRLLDKAHPIKWSVKLRLMLDIAL 133
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFI-----NGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP 193
G+EY+ P I+HRDL NIF+ N + K+ D G + H+ ++G
Sbjct: 134 GIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVC-AKVADFGLSQ--QSVHSVSGLLGNF 190
Query: 194 EYMAPELY---EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQAL 250
++MAPE EE YTE D YSF + L ++T E P+ E S KI K ++ + L
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY-SYGKI--KFINMIREEGL 247
Query: 251 NKVK----DPEVKAFIEKCIA-QPRARPSASELLKDPFFSEL 287
P ++ IE C + P+ RP S ++K+ SEL
Sbjct: 248 RPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKE--LSEL 287
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 128/300 (42%), Gaps = 65/300 (21%)
Query: 36 AVKKVYRAFDQEEGIEVAWNQVR-LSHFSEDPVLVNRLHSEVQLLRTL----KNKYIIVC 90
A+KK+ AFD + +++ L HF D ++ + +LR + K + V
Sbjct: 84 AIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK-----DILRPTVPYGEFKSVYVV 138
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCI 150
+ D H ++ + ++++ ++ + Q+L GL+Y+H+ + +
Sbjct: 139 LDLMESDLHQIIH----------------SSQPLTLEHVRYFLYQLLRGLKYMHSAQ--V 180
Query: 151 IHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS-----IIGTPEYMAPELYEE-- 203
IHRDL SN+ +N N ++KIGD G A + S A H + T Y APEL
Sbjct: 181 IHRDLKPSNLLVNENC-ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLH 239
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDPEVKAF 261
+YT+ +D++S G EM+ + + V ++ V G P + V V+A+
Sbjct: 240 EYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAY 299
Query: 262 IEKCIA---------------------------QPRARPSASELLKDPFFSELNDDDSEP 294
I+ +P AR SA+ L+ PF ++ +D D EP
Sbjct: 300 IQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDDEP 359
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 130/267 (48%), Gaps = 29/267 (10%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+GSGA V A D+ G +VA +LS + + R + E+ LL+ ++++ +I
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIK--KLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 107
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKK--HRHVSIKALKKWSKQVLEGLEYLHTHEPC 149
V+ + NF ++T +K S + ++ Q+L+GL+Y+H+
Sbjct: 108 DVF-TPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHS--AG 164
Query: 150 IIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIG---TPEYMAPE--LYEED 204
++HRDL N+ +N + ++KI D G A HA + G T Y APE L
Sbjct: 165 VVHRDLKPGNLAVNEDC-ELKILDFGLA-----RHADAEMTGYVVTRWYRAPEVILSWMH 218
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYK--KVTGGVKPQALNKVKDPEVKAFI 262
Y + VDI+S G + EM+T + + D + ++ + KVTG + + K+ D K++I
Sbjct: 219 YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYI 278
Query: 263 E-------KCIAQ--PRARPSASELLK 280
+ K Q PRA P A++LL+
Sbjct: 279 QSLPQTPRKDFTQLFPRASPQAADLLE 305
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 128/300 (42%), Gaps = 65/300 (21%)
Query: 36 AVKKVYRAFDQEEGIEVAWNQVR-LSHFSEDPVLVNRLHSEVQLLRTL----KNKYIIVC 90
A+KK+ AFD + +++ L HF D ++ + +LR + K + V
Sbjct: 83 AIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK-----DILRPTVPYGEFKSVYVV 137
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCI 150
+ D H ++ + ++++ ++ + Q+L GL+Y+H+ + +
Sbjct: 138 LDLMESDLHQIIH----------------SSQPLTLEHVRYFLYQLLRGLKYMHSAQ--V 179
Query: 151 IHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS-----IIGTPEYMAPELYEE-- 203
IHRDL SN+ +N N ++KIGD G A + S A H + T Y APEL
Sbjct: 180 IHRDLKPSNLLVNENC-ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLH 238
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDPEVKAF 261
+YT+ +D++S G EM+ + + V ++ V G P + V V+A+
Sbjct: 239 EYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAY 298
Query: 262 IEKCIA---------------------------QPRARPSASELLKDPFFSELNDDDSEP 294
I+ +P AR SA+ L+ PF ++ +D D EP
Sbjct: 299 IQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDDEP 358
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 82/165 (49%), Gaps = 15/165 (9%)
Query: 74 SEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWS 133
E+ +LRTL +++II D +L + E G+LR Y +H + + L ++
Sbjct: 82 QEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFA 140
Query: 134 KQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP 193
+Q+ EG+ YLH IHRDL N+ ++ N VKIGD G A V H + +
Sbjct: 141 QQICEGMAYLHAQH--YIHRDLAARNVLLD-NDRLVKIGDFGLAKAVPEGHEXYRVREDG 197
Query: 194 E----YMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDS 233
+ + APE L E + D++SFG+ L E++T CDS
Sbjct: 198 DSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT------HCDS 236
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 136/305 (44%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G VA +LS + + R + E++LL+ +K+
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 100
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 158
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D G A + T Y APE+
Sbjct: 159 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDEMXGXVATRWYRAPEI 213
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 273
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 274 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 333
Query: 290 DDSEP 294
D EP
Sbjct: 334 PDDEP 338
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 107/235 (45%), Gaps = 30/235 (12%)
Query: 3 AANSNMSDRDGEPFVEVDPSGRFGRYSDLLGSGAVKKV----YRAFDQEEGIEVAWNQVR 58
++ DRD F E R ++ LG G V Y G VA +
Sbjct: 1 GSSGAFEDRDPTQFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK--K 53
Query: 59 LSHFSEDPVLVNRLHSEVQLLRTLKN----KYIIVCYSVWLDDQHNTLNFITEVCTSGNL 114
L H +E+ + E+++L++L++ KY VCYS L I E G+L
Sbjct: 54 LQHSTEEHL--RDFEREIEILKSLQHDNIVKYKGVCYSA----GRRNLKLIMEYLPYGSL 107
Query: 115 RTYRKKHR-HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGD 173
R Y +KH+ + L +++ Q+ +G+EYL T IHRDL NI + N +VKIGD
Sbjct: 108 RDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGD 164
Query: 174 LGFAAIVGRSHAAHSIIGTPE----YMAPE-LYEEDYTEMVDIYSFGLCLLEMVT 223
G ++ + + E + APE L E ++ D++SFG+ L E+ T
Sbjct: 165 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 81/163 (49%), Gaps = 8/163 (4%)
Query: 129 LKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS 188
L K + +++ LE+LH+ + +IHRD+ SN+ IN +GQVK D G + + A
Sbjct: 138 LGKIAVSIVKALEHLHS-KLSVIHRDVKPSNVLINA-LGQVKXCDFGISGYLVDDVAKDI 195
Query: 189 IIG-----TPEYMAPELYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTG 243
G PE + PEL ++ Y+ DI+S G+ +E+ + PY + + K+V
Sbjct: 196 DAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVE 255
Query: 244 GVKPQALNKVKDPEVKAFIEKCIAQ-PRARPSASELLKDPFFS 285
PQ E F +C+ + + RP+ EL + PFF+
Sbjct: 256 EPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFFT 298
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 121/282 (42%), Gaps = 39/282 (13%)
Query: 28 YSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHS---EVQLLRTLKN 84
Y +G G V++ ++ VA + L + ++ + EV ++ L +
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82
Query: 85 KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQ------VLE 138
I+ Y + HN + E G+L HR + KWS + +
Sbjct: 83 PNIVKLYGL----MHNPPRMVMEFVPCGDLY-----HRLLDKAHPIKWSVKLRLMLDIAL 133
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFI-----NGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP 193
G+EY+ P I+HRDL NIF+ N + K+ D G + H+ ++G
Sbjct: 134 GIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVC-AKVADFGTSQ--QSVHSVSGLLGNF 190
Query: 194 EYMAPELY---EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQAL 250
++MAPE EE YTE D YSF + L ++T E P+ E S KI K ++ + L
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY-SYGKI--KFINMIREEGL 247
Query: 251 NKVK----DPEVKAFIEKCIA-QPRARPSASELLKDPFFSEL 287
P ++ IE C + P+ RP S ++K+ SEL
Sbjct: 248 RPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKE--LSEL 287
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 130/267 (48%), Gaps = 29/267 (10%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+GSGA V A D+ G +VA +LS + + R + E+ LL+ ++++ +I
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIK--KLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKK--HRHVSIKALKKWSKQVLEGLEYLHTHEPC 149
V+ + NF ++T +K S + ++ Q+L+GL+Y+H+
Sbjct: 90 DVF-TPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHS--AG 146
Query: 150 IIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIG---TPEYMAPE--LYEED 204
++HRDL N+ +N + ++KI D G A HA + G T Y APE L
Sbjct: 147 VVHRDLKPGNLAVNEDC-ELKILDFGLA-----RHADAEMTGYVVTRWYRAPEVILSWMH 200
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYK--KVTGGVKPQALNKVKDPEVKAFI 262
Y + VDI+S G + EM+T + + D + ++ + KVTG + + K+ D K++I
Sbjct: 201 YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYI 260
Query: 263 E-------KCIAQ--PRARPSASELLK 280
+ K Q PRA P A++LL+
Sbjct: 261 QSLPQTPRKDFTQLFPRASPQAADLLE 287
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 105/230 (45%), Gaps = 30/230 (13%)
Query: 8 MSDRDGEPFVEVDPSGRFGRYSDLLGSGAVKKV----YRAFDQEEGIEVAWNQVRLSHFS 63
DRD F E R ++ LG G V Y G VA +L H +
Sbjct: 4 FEDRDPTQFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK--KLQHST 56
Query: 64 EDPVLVNRLHSEVQLLRTLKN----KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRK 119
E+ + E+++L++L++ KY VCYS L I E G+LR Y +
Sbjct: 57 EEHL--RDFEREIEILKSLQHDNIVKYKGVCYSA----GRRNLKLIMEYLPYGSLRDYLQ 110
Query: 120 KHR-HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA 178
KH+ + L +++ Q+ +G+EYL T IHRDL NI + N +VKIGD G
Sbjct: 111 KHKERIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTK 167
Query: 179 IVGRSHAAHSIIGTPE----YMAPE-LYEEDYTEMVDIYSFGLCLLEMVT 223
++ + + E + APE L E ++ D++SFG+ L E+ T
Sbjct: 168 VLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 105/228 (46%), Gaps = 30/228 (13%)
Query: 10 DRDGEPFVEVDPSGRFGRYSDLLGSGAVKKV----YRAFDQEEGIEVAWNQVRLSHFSED 65
DRD F E R ++ LG G V Y G VA +L H +E+
Sbjct: 4 DRDPTQFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK--KLQHSTEE 56
Query: 66 PVLVNRLHSEVQLLRTLKN----KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKH 121
+ E+++L++L++ KY VCYS L I E G+LR Y +KH
Sbjct: 57 HL--RDFEREIEILKSLQHDNIVKYKGVCYSA----GRRNLKLIMEYLPYGSLRDYLQKH 110
Query: 122 R-HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV 180
+ + L +++ Q+ +G+EYL T IHRDL NI + N +VKIGD G ++
Sbjct: 111 KERIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVL 167
Query: 181 GRSHAAHSIIGTPE----YMAPE-LYEEDYTEMVDIYSFGLCLLEMVT 223
+ + E + APE L E ++ D++SFG+ L E+ T
Sbjct: 168 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 105/230 (45%), Gaps = 30/230 (13%)
Query: 8 MSDRDGEPFVEVDPSGRFGRYSDLLGSGAVKKV----YRAFDQEEGIEVAWNQVRLSHFS 63
DRD F E R ++ LG G V Y G VA +L H +
Sbjct: 3 FEDRDPTQFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK--KLQHST 55
Query: 64 EDPVLVNRLHSEVQLLRTLKN----KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRK 119
E+ + E+++L++L++ KY VCYS L I E G+LR Y +
Sbjct: 56 EEHL--RDFEREIEILKSLQHDNIVKYKGVCYSA----GRRNLKLIMEYLPYGSLRDYLQ 109
Query: 120 KHR-HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA 178
KH+ + L +++ Q+ +G+EYL T IHRDL NI + N +VKIGD G
Sbjct: 110 KHKERIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTK 166
Query: 179 IVGRSHAAHSIIGTPE----YMAPE-LYEEDYTEMVDIYSFGLCLLEMVT 223
++ + + E + APE L E ++ D++SFG+ L E+ T
Sbjct: 167 VLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 38/218 (17%)
Query: 28 YSDLLGSGAVKKVYRAFDQEEG-IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
+ ++LG G + + +E G + V +R ++ L EV+++R L++
Sbjct: 14 HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFL-----KEVKVMRCLEHPN 68
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWS------KQVLEGL 140
++ V D+ LNFITE G LR K S+ + WS K + G+
Sbjct: 69 VLKFIGVLYKDKR--LNFITEYIKGGTLRGIIK-----SMDSQYPWSQRVSFAKDIASGM 121
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAA-------------- 186
YLH+ IIHRDLN N + N V + D G A ++
Sbjct: 122 AYLHSMN--IIHRDLNSHNCLVREN-KNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKK 178
Query: 187 -HSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMV 222
++++G P +MAPE+ Y E VD++SFG+ L E++
Sbjct: 179 RYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 105/230 (45%), Gaps = 30/230 (13%)
Query: 8 MSDRDGEPFVEVDPSGRFGRYSDLLGSGAVKKV----YRAFDQEEGIEVAWNQVRLSHFS 63
DRD F E R ++ LG G V Y G VA +L H +
Sbjct: 5 FEDRDPTQFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK--KLQHST 57
Query: 64 EDPVLVNRLHSEVQLLRTLKN----KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRK 119
E+ + E+++L++L++ KY VCYS L I E G+LR Y +
Sbjct: 58 EEHL--RDFEREIEILKSLQHDNIVKYKGVCYSA----GRRNLKLIMEYLPYGSLRDYLQ 111
Query: 120 KHR-HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA 178
KH+ + L +++ Q+ +G+EYL T IHRDL NI + N +VKIGD G
Sbjct: 112 KHKERIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTK 168
Query: 179 IVGRSHAAHSIIGTPE----YMAPE-LYEEDYTEMVDIYSFGLCLLEMVT 223
++ + + E + APE L E ++ D++SFG+ L E+ T
Sbjct: 169 VLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 105/230 (45%), Gaps = 30/230 (13%)
Query: 8 MSDRDGEPFVEVDPSGRFGRYSDLLGSGAVKKV----YRAFDQEEGIEVAWNQVRLSHFS 63
DRD F E R ++ LG G V Y G VA +L H +
Sbjct: 2 FEDRDPTQFEE-----RHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVK--KLQHST 54
Query: 64 EDPVLVNRLHSEVQLLRTLKN----KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRK 119
E+ + E+++L++L++ KY VCYS L I E G+LR Y +
Sbjct: 55 EEHL--RDFEREIEILKSLQHDNIVKYKGVCYSA----GRRNLKLIMEFLPYGSLREYLQ 108
Query: 120 KHR-HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA 178
KH+ + L +++ Q+ +G+EYL T IHRDL NI + N +VKIGD G
Sbjct: 109 KHKERIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTK 165
Query: 179 IVGRSHAAHSIIGTPE----YMAPE-LYEEDYTEMVDIYSFGLCLLEMVT 223
++ + + E + APE L E ++ D++SFG+ L E+ T
Sbjct: 166 VLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 15/165 (9%)
Query: 74 SEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWS 133
E+ +LRTL +++II D +L + E G+LR Y +H + + L ++
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFA 123
Query: 134 KQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP 193
+Q+ EG+ YLH+ IHR+L N+ ++ N VKIGD G A V H + +
Sbjct: 124 QQICEGMAYLHSQH--YIHRNLAARNVLLD-NDRLVKIGDFGLAKAVPEGHEYYRVREDG 180
Query: 194 E----YMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDS 233
+ + APE L E + D++SFG+ L E++T CDS
Sbjct: 181 DSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT------HCDS 219
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 111/233 (47%), Gaps = 23/233 (9%)
Query: 14 EPFVEVDPS---GRFGRYSDLLGSGAVKKV----YRAFDQEEGIEVAWNQVRLSHFSEDP 66
+P EVDP+ RF + LG G KV Y G +VA ++
Sbjct: 8 KPATEVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNH- 66
Query: 67 VLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRH-VS 125
+ L E+++LR L ++ I+ + +D N + I E SG+L+ Y K+++ ++
Sbjct: 67 --IADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKIN 124
Query: 126 IKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA 185
+K K++ Q+ +G++YL + + +HRDL N+ + QVKIGD G +
Sbjct: 125 LKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESE-HQVKIGDFGLTKAIETDKE 181
Query: 186 AHSIIGTPE----YMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDS 233
++ + + APE L + + D++SFG+ L E++T Y + DS
Sbjct: 182 XXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT----YCDSDS 230
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 18/225 (8%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHF-----SEDPVLVNRLH----SEVQLLRTL 82
LGSGA +V ++ E A ++ S F S+D + + H +E+ LL++L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 83 KNKYIIVCYSVWLDDQHNTLNFITEVCTSGNL-RTYRKKHRHVSIKALKKWSKQVLEGLE 141
+ II + V+ D ++ L +TE G L +H+ A KQ+L G+
Sbjct: 104 DHPNIIKLFDVFEDKKYFYL--VTEFYEGGELFEQIINRHKFDECDAAN-IMKQILSGIC 160
Query: 142 YLHTHEPCIIHRDLNCSNIFI--NGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE 199
YLH H I+HRD+ NI + ++ +KI D G ++ + + +GT Y+APE
Sbjct: 161 YLHKHN--IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPE 218
Query: 200 LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ ++ Y E D++S G+ + ++ P+ + I KKV G
Sbjct: 219 VLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQND-QDIIKKVEKG 262
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 119/271 (43%), Gaps = 20/271 (7%)
Query: 22 SGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRT 81
S R+ R L GSGA +V D+ G E A ++ S + L EV +L+
Sbjct: 20 SDRYQRVKKL-GSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSN-SGALLDEVAVLKQ 77
Query: 82 LKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLR---TYRKKHRHVSIKALKKWSKQVLE 138
L + I+ Y + D ++ L + EV G L R+K V + KQVL
Sbjct: 78 LDHPNIMKLYEFFEDKRNYYL--VMEVYRGGELFDEIILRQKFSEVDAAVI---MKQVLS 132
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNI--GQVKIGDLGFAAIVGRSHAAHSIIGTPEYM 196
G YLH H I+HRDL N+ + +KI D G +A +GT Y+
Sbjct: 133 GTTYLHKHN--IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYI 190
Query: 197 APELYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG---VKPQALNKV 253
APE+ + Y E D++S G+ L ++ P+ + +I K+V G P +V
Sbjct: 191 APEVLRKKYDEKCDVWSCGVILYILLCGYPPFG-GQTDQEILKRVEKGKFSFDPPDWTQV 249
Query: 254 KDPEVKAFIEKCIA-QPRARPSASELLKDPF 283
D E K ++ + +P R SA E L P+
Sbjct: 250 SD-EAKQLVKLMLTYEPSKRISAEEALNHPW 279
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 82/165 (49%), Gaps = 15/165 (9%)
Query: 74 SEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWS 133
E+ +LRTL +++II D +L + E G+LR Y +H + + L ++
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFA 123
Query: 134 KQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP 193
+Q+ EG+ YLH IHR+L N+ ++ N VKIGD G A V H + +
Sbjct: 124 QQICEGMAYLHAQH--YIHRNLAARNVLLD-NDRLVKIGDFGLAKAVPEGHEYYRVREDG 180
Query: 194 E----YMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDS 233
+ + APE L E + D++SFG+ L E++T CDS
Sbjct: 181 DSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT------HCDS 219
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 89/176 (50%), Gaps = 19/176 (10%)
Query: 58 RLSHFSEDPVLVNRLHSEVQLLRTLKN----KYIIVCYSVWLDDQHNTLNFITEVCTSGN 113
+L H +E+ + E+++L++L++ KY VCYS L I E G+
Sbjct: 46 KLQHSTEEHL--RDFEREIEILKSLQHDNIVKYKGVCYSA----GRRNLKLIMEYLPYGS 99
Query: 114 LRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIG 172
LR Y +KH+ + L +++ Q+ +G+EYL T IHRDL NI + N +VKIG
Sbjct: 100 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIG 156
Query: 173 DLGFAAIVGRSHAAHSIIGTPE----YMAPE-LYEEDYTEMVDIYSFGLCLLEMVT 223
D G ++ + + E + APE L E ++ D++SFG+ L E+ T
Sbjct: 157 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 89/176 (50%), Gaps = 19/176 (10%)
Query: 58 RLSHFSEDPVLVNRLHSEVQLLRTLKN----KYIIVCYSVWLDDQHNTLNFITEVCTSGN 113
+L H +E+ + E+++L++L++ KY VCYS L I E G+
Sbjct: 46 KLQHSTEEHL--RDFEREIEILKSLQHDNIVKYKGVCYSA----GRRNLKLIMEYLPYGS 99
Query: 114 LRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIG 172
LR Y +KH+ + L +++ Q+ +G+EYL T IHRDL NI + N +VKIG
Sbjct: 100 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIG 156
Query: 173 DLGFAAIVGRSHAAHSIIGTPE----YMAPE-LYEEDYTEMVDIYSFGLCLLEMVT 223
D G ++ + + E + APE L E ++ D++SFG+ L E+ T
Sbjct: 157 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 89/176 (50%), Gaps = 19/176 (10%)
Query: 58 RLSHFSEDPVLVNRLHSEVQLLRTLKN----KYIIVCYSVWLDDQHNTLNFITEVCTSGN 113
+L H +E+ + E+++L++L++ KY VCYS L I E G+
Sbjct: 44 KLQHSTEEHL--RDFEREIEILKSLQHDNIVKYKGVCYSA----GRRNLKLIMEYLPYGS 97
Query: 114 LRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIG 172
LR Y +KH+ + L +++ Q+ +G+EYL T IHRDL NI + N +VKIG
Sbjct: 98 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIG 154
Query: 173 DLGFAAIVGRSHAAHSIIGTPE----YMAPE-LYEEDYTEMVDIYSFGLCLLEMVT 223
D G ++ + + E + APE L E ++ D++SFG+ L E+ T
Sbjct: 155 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 89/176 (50%), Gaps = 19/176 (10%)
Query: 58 RLSHFSEDPVLVNRLHSEVQLLRTLKN----KYIIVCYSVWLDDQHNTLNFITEVCTSGN 113
+L H +E+ + E+++L++L++ KY VCYS L I E G+
Sbjct: 45 KLQHSTEEHL--RDFEREIEILKSLQHDNIVKYKGVCYSA----GRRNLKLIMEYLPYGS 98
Query: 114 LRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIG 172
LR Y +KH+ + L +++ Q+ +G+EYL T IHRDL NI + N +VKIG
Sbjct: 99 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIG 155
Query: 173 DLGFAAIVGRSHAAHSIIGTPE----YMAPE-LYEEDYTEMVDIYSFGLCLLEMVT 223
D G ++ + + E + APE L E ++ D++SFG+ L E+ T
Sbjct: 156 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 110/229 (48%), Gaps = 24/229 (10%)
Query: 24 RFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK 83
R+ R + L G G +VY+A D VA ++RL H E+ + EV LL+ L+
Sbjct: 35 RYRRITKL-GEGTYGEVYKAIDTVTNETVAIKRIRLEH--EEEGVPGTAIREVSLLKELQ 91
Query: 84 NKYIIVCYSVWLDDQHN-TLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEY 142
++ II SV HN L+ I E +L+ Y K+ VS++ +K + Q++ G+ +
Sbjct: 92 HRNIIELKSV---IHHNHRLHLIFEYA-ENDLKKYMDKNPDVSMRVIKSFLYQLINGVNF 147
Query: 143 LHTHEPCIIHRDLNCSNIFIN----GNIGQVKIGDLGFAAIVG--RSHAAHSIIGTPEYM 196
H+ C +HRDL N+ ++ +KIGD G A G H II T Y
Sbjct: 148 CHSRR-C-LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII-TLWYR 204
Query: 197 APE--LYEEDYTEMVDIYSFGLCLLEMVTMEIPY----SECDSVAKIYK 239
PE L Y+ VDI+S EM+ M+ P SE D + KI++
Sbjct: 205 PPEILLGSRHYSTSVDIWSIACIWAEML-MKTPLFPGDSEIDQLFKIFE 252
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 121/282 (42%), Gaps = 39/282 (13%)
Query: 28 YSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHS---EVQLLRTLKN 84
Y +G G V++ ++ VA + L + ++ + EV ++ L +
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82
Query: 85 KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQ------VLE 138
I+ Y + HN + E G+L HR + KWS + +
Sbjct: 83 PNIVKLYGL----MHNPPRMVMEFVPCGDLY-----HRLLDKAHPIKWSVKLRLMLDIAL 133
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFI-----NGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP 193
G+EY+ P I+HRDL NIF+ N + K+ D F+ H+ ++G
Sbjct: 134 GIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVC-AKVAD--FSLSQQSVHSVSGLLGNF 190
Query: 194 EYMAPELY---EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQAL 250
++MAPE EE YTE D YSF + L ++T E P+ E S KI K ++ + L
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY-SYGKI--KFINMIREEGL 247
Query: 251 NKVK----DPEVKAFIEKCIA-QPRARPSASELLKDPFFSEL 287
P ++ IE C + P+ RP S ++K+ SEL
Sbjct: 248 RPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKE--LSEL 287
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 89/176 (50%), Gaps = 19/176 (10%)
Query: 58 RLSHFSEDPVLVNRLHSEVQLLRTLKN----KYIIVCYSVWLDDQHNTLNFITEVCTSGN 113
+L H +E+ + E+++L++L++ KY VCYS L I E G+
Sbjct: 64 KLQHSTEEHL--RDFEREIEILKSLQHDNIVKYKGVCYSA----GRRNLKLIMEYLPYGS 117
Query: 114 LRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIG 172
LR Y +KH+ + L +++ Q+ +G+EYL T IHRDL NI + N +VKIG
Sbjct: 118 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIG 174
Query: 173 DLGFAAIVGRSHAAHSIIGTPE----YMAPE-LYEEDYTEMVDIYSFGLCLLEMVT 223
D G ++ + + E + APE L E ++ D++SFG+ L E+ T
Sbjct: 175 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 120/266 (45%), Gaps = 22/266 (8%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LGSGA +V D+ +E A +R + S ++L EV +L+ L + I+ Y
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSN--SKLLEEVAVLKLLDHPNIMKLY 102
Query: 92 SVWLDDQHNTLNFITEVCTSGNLR---TYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEP 148
+ D ++ L + E G L +R K V + KQVL G+ YLH H
Sbjct: 103 DFFEDKRNYYL--VMECYKGGELFDEIIHRMKFNEVDAAVI---IKQVLSGVTYLHKHN- 156
Query: 149 CIIHRDLNCSNIFINGN--IGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEEDYT 206
I+HRDL N+ + +KI D G +A+ +GT Y+APE+ + Y
Sbjct: 157 -IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYD 215
Query: 207 EMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV----KPQALNKVKDPEVKAFI 262
E D++S G+ L ++ P+ + +I +KV G P+ N + K I
Sbjct: 216 EKCDVWSIGVILFILLAGYPPFG-GQTDQEILRKVEKGKYTFDSPEWKNVSEGA--KDLI 272
Query: 263 EKCIA-QPRARPSASELLKDPFFSEL 287
++ + + R SA + L+ P+ E+
Sbjct: 273 KQMLQFDSQRRISAQQALEHPWIKEM 298
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 89/176 (50%), Gaps = 19/176 (10%)
Query: 58 RLSHFSEDPVLVNRLHSEVQLLRTLKN----KYIIVCYSVWLDDQHNTLNFITEVCTSGN 113
+L H +E+ + E+++L++L++ KY VCYS L I E G+
Sbjct: 46 KLQHSTEEHL--RDFEREIEILKSLQHDNIVKYKGVCYSA----GRRNLKLIMEYLPYGS 99
Query: 114 LRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIG 172
LR Y +KH+ + L +++ Q+ +G+EYL T IHRDL NI + N +VKIG
Sbjct: 100 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIG 156
Query: 173 DLGFAAIVGRSHAAHSIIGTPE----YMAPE-LYEEDYTEMVDIYSFGLCLLEMVT 223
D G ++ + + E + APE L E ++ D++SFG+ L E+ T
Sbjct: 157 DFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 119/271 (43%), Gaps = 20/271 (7%)
Query: 22 SGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRT 81
S R+ R L GSGA +V D+ G E A ++ S + L EV +L+
Sbjct: 3 SDRYQRVKKL-GSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSN-SGALLDEVAVLKQ 60
Query: 82 LKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLR---TYRKKHRHVSIKALKKWSKQVLE 138
L + I+ Y + D ++ L + EV G L R+K V + KQVL
Sbjct: 61 LDHPNIMKLYEFFEDKRNYYL--VMEVYRGGELFDEIILRQKFSEVDAAVI---MKQVLS 115
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNI--GQVKIGDLGFAAIVGRSHAAHSIIGTPEYM 196
G YLH H I+HRDL N+ + +KI D G +A +GT Y+
Sbjct: 116 GTTYLHKHN--IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYI 173
Query: 197 APELYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG---VKPQALNKV 253
APE+ + Y E D++S G+ L ++ P+ + +I K+V G P +V
Sbjct: 174 APEVLRKKYDEKCDVWSCGVILYILLCGYPPFG-GQTDQEILKRVEKGKFSFDPPDWTQV 232
Query: 254 KDPEVKAFIEKCIA-QPRARPSASELLKDPF 283
D E K ++ + +P R SA E L P+
Sbjct: 233 SD-EAKQLVKLMLTYEPSKRISAEEALNHPW 262
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 89/176 (50%), Gaps = 19/176 (10%)
Query: 58 RLSHFSEDPVLVNRLHSEVQLLRTLKN----KYIIVCYSVWLDDQHNTLNFITEVCTSGN 113
+L H +E+ + E+++L++L++ KY VCYS L I E G+
Sbjct: 64 KLQHSTEEHL--RDFEREIEILKSLQHDNIVKYKGVCYSA----GRRNLKLIMEYLPYGS 117
Query: 114 LRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIG 172
LR Y +KH+ + L +++ Q+ +G+EYL T IHRDL NI + N +VKIG
Sbjct: 118 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIG 174
Query: 173 DLGFAAIVGRSHAAHSIIGTPE----YMAPE-LYEEDYTEMVDIYSFGLCLLEMVT 223
D G ++ + + E + APE L E ++ D++SFG+ L E+ T
Sbjct: 175 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 135/300 (45%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 70
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E +L+T+ + + +K + Q+L+GL + H+H
Sbjct: 71 LDVI--HTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 126
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELYE--E 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE+ +
Sbjct: 127 -VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYX-HEVV-TLWYRAPEILLGCK 182
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 298
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 130/272 (47%), Gaps = 18/272 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQV--RLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIV 89
LGSG V + ++ G+E A + R S S V + EV +LR + + +I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPC 149
+ V+ + + I E+ + G L + + +S + + KQ+L+G+ YLHT +
Sbjct: 80 LHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK-- 135
Query: 150 IIHRDLNCSNIFI---NGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
I H DL NI + N I +K+ D G A + +I GTPE++APE+ YE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPL 195
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQALNKVKDPEVKAF 261
E D++S G+ +++ P+ ++ +++A I V+ + ++ + K F
Sbjct: 196 GLE-ADMWSIGVITYILLSGASPFLGDTKQETLANI-TAVSYDFDEEFFSQTSEL-AKDF 252
Query: 262 IEK-CIAQPRARPSASELLKDPFFSELNDDDS 292
I K + + R R + E L+ P+ + +++ +
Sbjct: 253 IRKLLVKETRKRLTIQEALRHPWITPVDNQQA 284
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 15/182 (8%)
Query: 66 PVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVS 125
P L + E+++LRTL +++I+ D ++ + E G+LR Y +H V
Sbjct: 52 PQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH-CVG 110
Query: 126 IKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA 185
+ L +++Q+ EG+ YLH IHR L N+ ++ N VKIGD G A V H
Sbjct: 111 LAQLLLFAQQICEGMAYLHAQH--YIHRALAARNVLLD-NDRLVKIGDFGLAKAVPEGHE 167
Query: 186 AHSIIGTPE----YMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKK 240
+ + + + APE +E + D++SFG+ L E++T CDS + K
Sbjct: 168 YYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTY------CDSNQSPHTK 221
Query: 241 VT 242
T
Sbjct: 222 FT 223
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 101 TLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNI 160
L F+ E G+L + + + ++ +++ GL++LH+ I++RDL NI
Sbjct: 93 NLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK--GIVYRDLKLDNI 150
Query: 161 FINGNIGQVKIGDLGFAA--IVGRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGLC 217
++ + G +KI D G ++G + + GTP+Y+APE L + Y VD +SFG+
Sbjct: 151 LLDKD-GHIKIADFGMCKENMLGDA-KTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVL 208
Query: 218 LLEMVTMEIPYSECDSVAKIYK-KVTGGVKPQALNK-VKDPEVKAFIEKCIAQPRARPSA 275
L EM+ + P+ D + ++ P+ L K KD VK F+ +P R
Sbjct: 209 LYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVR----EPEKRLGV 264
Query: 276 -SELLKDPFFSELNDDDSE 293
++ + P F E+N ++ E
Sbjct: 265 RGDIRQHPLFREINWEELE 283
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 15/182 (8%)
Query: 66 PVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVS 125
P L + E+++LRTL +++I+ D ++ + E G+LR Y +H V
Sbjct: 51 PQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH-CVG 109
Query: 126 IKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA 185
+ L +++Q+ EG+ YLH IHR L N+ ++ N VKIGD G A V H
Sbjct: 110 LAQLLLFAQQICEGMAYLHAQH--YIHRALAARNVLLD-NDRLVKIGDFGLAKAVPEGHE 166
Query: 186 AHSIIGTPE----YMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKK 240
+ + + + APE +E + D++SFG+ L E++T CDS + K
Sbjct: 167 YYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTY------CDSNQSPHTK 220
Query: 241 VT 242
T
Sbjct: 221 FT 222
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 101 TLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNI 160
L F+ E G+L + + + ++ +++ GL++LH+ I++RDL NI
Sbjct: 92 NLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK--GIVYRDLKLDNI 149
Query: 161 FINGNIGQVKIGDLGFAA--IVGRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGLC 217
++ + G +KI D G ++G + + GTP+Y+APE L + Y VD +SFG+
Sbjct: 150 LLDKD-GHIKIADFGMCKENMLGDA-KTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVL 207
Query: 218 LLEMVTMEIPYSECDSVAKIYK-KVTGGVKPQALNK-VKDPEVKAFIEKCIAQPRARPSA 275
L EM+ + P+ D + ++ P+ L K KD VK F+ +P R
Sbjct: 208 LYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVR----EPEKRLGV 263
Query: 276 -SELLKDPFFSELNDDDSE 293
++ + P F E+N ++ E
Sbjct: 264 RGDIRQHPLFREINWEELE 282
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 92/207 (44%), Gaps = 15/207 (7%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG+G V R Q+ G +VA Q R P R E+Q+++ L + ++
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQEL---SPKNRERWCLEIQIMKKLNHPNVVSAR 78
Query: 92 SVWLDDQHNTLN----FITEVCTSGNLRTYRKKHRH---VSIKALKKWSKQVLEGLEYLH 144
V Q N E C G+LR Y + + + ++ + L YLH
Sbjct: 79 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH 138
Query: 145 THEPCIIHRDLNCSNIFINGNIGQV--KIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYE 202
+ IIHRDL NI + ++ KI DLG+A + + +GT +Y+APEL E
Sbjct: 139 ENR--IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLE 196
Query: 203 E-DYTEMVDIYSFGLCLLEMVTMEIPY 228
+ YT VD +SFG E +T P+
Sbjct: 197 QKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 136/305 (44%), Gaps = 46/305 (15%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V AFD + G VA +LS + + R + E++LL+ +K+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ +I V+ ++ N + +T + +L K + ++ ++ Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGL 138
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL 200
+Y+H+ + IIHRDL SN+ +N + ++KI D A + + T Y APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDC-ELKILDFYLARHTDDEMTGY--VATRWYRAPEI 193
Query: 201 YEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 256
Y + VDI+S G + E++T + D + K+ ++ G + L K+
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 257 EVKAFIEKCIAQPRA---------------------------RPSASELLKDPFFSELND 289
+ +I+ P+ R +A++ L +F++ +D
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 290 DDSEP 294
D EP
Sbjct: 314 PDDEP 318
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 92/207 (44%), Gaps = 15/207 (7%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG+G V R Q+ G +VA Q R P R E+Q+++ L + ++
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQEL---SPKNRERWCLEIQIMKKLNHPNVVSAR 79
Query: 92 SVWLDDQHNTLN----FITEVCTSGNLRTYRKKHRH---VSIKALKKWSKQVLEGLEYLH 144
V Q N E C G+LR Y + + + ++ + L YLH
Sbjct: 80 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH 139
Query: 145 THEPCIIHRDLNCSNIFINGNIGQV--KIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYE 202
+ IIHRDL NI + ++ KI DLG+A + + +GT +Y+APEL E
Sbjct: 140 ENR--IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLE 197
Query: 203 E-DYTEMVDIYSFGLCLLEMVTMEIPY 228
+ YT VD +SFG E +T P+
Sbjct: 198 QKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 130/272 (47%), Gaps = 18/272 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQV--RLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIV 89
LGSG V + ++ G+E A + R S S V + EV +LR + + +I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPC 149
+ V+ + + I E+ + G L + + +S + + KQ+L+G+ YLHT +
Sbjct: 80 LHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK-- 135
Query: 150 IIHRDLNCSNIFI---NGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
I H DL NI + N I +K+ D G A + +I GTPE++APE+ YE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPL 195
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQALNKVKDPEVKAF 261
E D++S G+ +++ P+ ++ +++A I V+ + ++ + K F
Sbjct: 196 GLE-ADMWSIGVITYILLSGASPFLGDTKQETLANI-TAVSYDFDEEFFSQTSEL-AKDF 252
Query: 262 IEK-CIAQPRARPSASELLKDPFFSELNDDDS 292
I K + + R R + E L+ P+ + +++ +
Sbjct: 253 IRKLLVKETRKRLTIQEALRHPWITPVDNQQA 284
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 126/265 (47%), Gaps = 18/265 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQV--RLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIV 89
LGSG V + ++ G+E A + R S S V + EV +LR + + II
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPC 149
+ V+ + + I E+ + G L + + +S + + KQ+L+G+ YLHT +
Sbjct: 80 LHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK-- 135
Query: 150 IIHRDLNCSNIFI---NGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
I H DL NI + N I +K+ D G A + +I GTPE++APE+ YE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPL 195
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQALNKVKDPEVKAF 261
E D++S G+ +++ P+ ++ +++A I V+ + ++ + K F
Sbjct: 196 GLE-ADMWSIGVITYILLSGASPFLGDTKQETLANI-TAVSYDFDEEFFSQTSEL-AKDF 252
Query: 262 IEK-CIAQPRARPSASELLKDPFFS 285
I K + + R R + E L+ P+ +
Sbjct: 253 IRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 13/229 (5%)
Query: 25 FGRY--SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL 82
G+Y DLLG G+ KV D E A ++ P + E+QLLR L
Sbjct: 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL 63
Query: 83 KNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRK-KHRHVSIKALKKWSKQVLEGLE 141
++K +I V +++ + + E C G + + + Q+++GLE
Sbjct: 64 RHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLE 123
Query: 142 YLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAP 198
YLH+ I+H+D+ N+ + G +KI LG A + + G+P + P
Sbjct: 124 YLHSQG--IVHKDIKPGNLLLTTG-GTLKISALGVAEALHPFAADDTCRTSQGSPAFQPP 180
Query: 199 ELYE--EDYTEM-VDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG 244
E+ + ++ VDI+S G+ L + T P+ E D++ K+++ + G
Sbjct: 181 EIANGLDTFSGFKVDIWSAGVTLYNITTGLYPF-EGDNIYKLFENIGKG 228
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 129/272 (47%), Gaps = 18/272 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQV--RLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIV 89
LGSG V + ++ G+E A + R S S V + EV +LR + + +I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPC 149
+ V+ + + I E+ + G L + + +S + + KQ+L+G+ YLHT +
Sbjct: 80 LHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK-- 135
Query: 150 IIHRDLNCSNIFI---NGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
I H DL NI + N I +K+ D G A + +I GTPE++APE+ YE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPL 195
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQALNKVKDPEVKAF 261
E D++S G+ +++ P+ ++ +++A I V+ + + + K F
Sbjct: 196 GLE-ADMWSIGVITYILLSGASPFLGDTKQETLANI-TSVSYDFDEEFFSHTSEL-AKDF 252
Query: 262 IEK-CIAQPRARPSASELLKDPFFSELNDDDS 292
I K + + R R + E L+ P+ + +++ +
Sbjct: 253 IRKLLVKETRKRLTIQEALRHPWITPVDNQQA 284
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 135/300 (45%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 69
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E S +L+ + + + +K + Q+L+GL + H+H
Sbjct: 70 LDVI--HTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 125
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELYE--E 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE+ +
Sbjct: 126 -VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYX-HEVV-TLWYRAPEILLGCK 181
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 297
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 135/300 (45%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 66
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E +L+T+ + + +K + Q+L+GL + H+H
Sbjct: 67 LDVI--HTENKLYLVFE-HVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 122
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELYE--E 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE+ +
Sbjct: 123 -VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYT-HEVV-TLWYRAPEILLGCK 178
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 294
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 135/300 (45%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 70
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E S +L+ + + + +K + Q+L+GL + H+H
Sbjct: 71 LDVI--HTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 126
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELYE--E 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE+ +
Sbjct: 127 -VLHRDLKPENLLINTE-GAIKLADFGLARAFGVPVRTYX-HEVV-TLWYRAPEILLGCK 182
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 298
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 135/300 (45%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 70
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E S +L+ + + + +K + Q+L+GL + H+H
Sbjct: 71 LDVI--HTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 126
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELYE--E 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE+ +
Sbjct: 127 -VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYX-HEVV-TLWYRAPEILLGCK 182
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 298
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 135/300 (45%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 68
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E S +L+ + + + +K + Q+L+GL + H+H
Sbjct: 69 LDVI--HTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 124
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELYE--E 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE+ +
Sbjct: 125 -VLHRDLKPENLLINTE-GAIKLADFGLARAFGVPVRTYX-HEVV-TLWYRAPEILLGCK 180
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 296
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 8/149 (5%)
Query: 140 LEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE 199
L H H ++H D+ +NIF+ G G+ K+GD G +G + A G P YMAPE
Sbjct: 168 LALAHLHSQGLVHLDVKPANIFL-GPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPE 226
Query: 200 LYEEDYTEMVDIYSFGLCLLEMV-TMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEV 258
L + Y D++S GL +LE+ ME+P+ + ++++ G P E+
Sbjct: 227 LLQGSYGTAADVFSLGLTILEVACNMELPHG-----GEGWQQLRQGYLPPEFTAGLSSEL 281
Query: 259 KAFIEKCI-AQPRARPSASELLKDPFFSE 286
++ + + P+ R +A LL P +
Sbjct: 282 RSVLVMMLEPDPKLRATAEALLALPVLRQ 310
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 114/262 (43%), Gaps = 14/262 (5%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA V R + E A + S +L E ++ R LK+ I+ +
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDH--QKLEREARICRLLKHPNIVRLH 96
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
++ + L F ++ T G L + S Q+LE + ++H H+ I+
Sbjct: 97 DSISEEGFHYLVF--DLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHD--IV 152
Query: 152 HRDLNCSNIFINGNI--GQVKIGDLGFA-AIVGRSHAAHSIIGTPEYMAPELYEED-YTE 207
HRDL N+ + VK+ D G A + G A GTP Y++PE+ +D Y +
Sbjct: 153 HRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGK 212
Query: 208 MVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVK--PQALNKVKDPEVKAFIEKC 265
VDI++ G+ L ++ P+ + D K+Y+++ G P PE K I +
Sbjct: 213 PVDIWACGVILYILLVGYPPFWDEDQ-HKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQM 271
Query: 266 IA-QPRARPSASELLKDPFFSE 286
+ P R +A + LK P+ +
Sbjct: 272 LTINPAKRITADQALKHPWVCQ 293
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 19/176 (10%)
Query: 58 RLSHFSEDPVLVNRLHSEVQLLRTLKN----KYIIVCYSVWLDDQHNTLNFITEVCTSGN 113
+L H +E+ + E+++L++L++ KY VCYS L I E G+
Sbjct: 47 KLQHSTEEHL--RDFEREIEILKSLQHDNIVKYKGVCYSA----GRRNLKLIMEYLPYGS 100
Query: 114 LRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIG 172
LR Y +KH+ + L +++ Q+ +G+EYL T IHR+L NI + N +VKIG
Sbjct: 101 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--YIHRNLATRNILVE-NENRVKIG 157
Query: 173 DLGFAAIVGRSHAAHSIIGTPE----YMAPE-LYEEDYTEMVDIYSFGLCLLEMVT 223
D G ++ + + + E + APE L E ++ D++SFG+ L E+ T
Sbjct: 158 DFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 134/300 (44%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 74
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E +L+ + + + +K + Q+L+GL + H+H
Sbjct: 75 LDVI--HTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 130
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPE--LYEE 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE L +
Sbjct: 131 -VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYT-HEVV-TLWYRAPEILLGXK 186
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 246
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 247 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 302
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 129/291 (44%), Gaps = 46/291 (15%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+G G V++A ++E VA +VRL +D + + E+ LL+ LK+K I+ +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLD--DDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
V D+ TL F E C + + + + + +K + Q+L+GL + H+ ++
Sbjct: 68 DVLHSDKKLTLVF--EFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN--VL 123
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELY--EEDYT 206
HRDL N+ IN N G++K+ D G A G R ++A + T Y P++ + Y+
Sbjct: 124 HRDLKPQNLLINRN-GELKLADFGLARAFGIPVRCYSAEVV--TLWYRPPDVLFGAKLYS 180
Query: 207 EMVDIYSFGLCLLEMVTMEIPYSEC----DSVAKIYKKVTGGVKPQALNKVKDPEVKAF- 261
+D++S G E+ P D + +I++ + + Q + K P+ K +
Sbjct: 181 TSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYP 240
Query: 262 -------------------------IEKCIAQPRARPSASELLKDPFFSEL 287
+ KC P R SA E L+ P+FS+
Sbjct: 241 MYPATTSLVNVVPKLNATGRDLLQNLLKC--NPVQRISAEEALQHPYFSDF 289
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 129/272 (47%), Gaps = 18/272 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQV--RLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIV 89
LGSG V + ++ G+E A + R S S V + EV +LR + + +I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPC 149
+ V+ + + I E+ + G L + + +S + + KQ+L+G+ YLHT +
Sbjct: 80 LHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK-- 135
Query: 150 IIHRDLNCSNIFI---NGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
I H DL NI + N I +K+ D G A + +I GTPE++APE+ YE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPL 195
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQALNKVKDPEVKAF 261
E D++S G+ +++ P+ ++ +++A I V+ + + + K F
Sbjct: 196 GLE-ADMWSIGVITYILLSGASPFLGDTKQETLANI-TSVSYDFDEEFFSHTSEL-AKDF 252
Query: 262 IEK-CIAQPRARPSASELLKDPFFSELNDDDS 292
I K + + R R + E L+ P+ + +++ +
Sbjct: 253 IRKLLVKETRKRLTIQEALRHPWITPVDNQQA 284
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 113/262 (43%), Gaps = 14/262 (5%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA V R G E A + S +L E ++ R LK+ I+ +
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDH--QKLEREARICRLLKHPNIVRLH 69
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
++ + L F ++ T G L + S +Q+LE + H H I+
Sbjct: 70 DSISEEGFHYLVF--DLVTGGELFEDIVAREYYSEADASHCIQQILESVN--HCHLNGIV 125
Query: 152 HRDLNCSNIFI--NGNIGQVKIGDLGFA-AIVGRSHAAHSIIGTPEYMAPELYEED-YTE 207
HRDL N+ + VK+ D G A + G A GTP Y++PE+ +D Y +
Sbjct: 126 HRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGK 185
Query: 208 MVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVK--PQALNKVKDPEVKAFIEKC 265
VD+++ G+ L ++ P+ + D ++Y+++ G P PE K I K
Sbjct: 186 PVDMWACGVILYILLVGYPPFWDEDQ-HRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKM 244
Query: 266 IA-QPRARPSASELLKDPFFSE 286
+ P R +ASE LK P+ +
Sbjct: 245 LTINPAKRITASEALKHPWICQ 266
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 129/272 (47%), Gaps = 18/272 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQV--RLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIV 89
LGSG V + ++ G+E A + R S S V + EV +LR + + +I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPC 149
+ V+ + + I E+ + G L + + +S + + KQ+L+G+ YLHT +
Sbjct: 80 LHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK-- 135
Query: 150 IIHRDLNCSNIFI---NGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
I H DL NI + N I +K+ D G A + +I GTPE++APE+ YE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPL 195
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQALNKVKDPEVKAF 261
E D++S G+ +++ P+ ++ +++A I V+ + + + K F
Sbjct: 196 GLE-ADMWSIGVITYILLSGASPFLGDTKQETLANI-TSVSYDFDEEFFSHTSEL-AKDF 252
Query: 262 IEK-CIAQPRARPSASELLKDPFFSELNDDDS 292
I K + + R R + E L+ P+ + +++ +
Sbjct: 253 IRKLLVKETRKRLTIQEALRHPWITPVDNQQA 284
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 134/300 (44%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 67
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E +L+ + + + +K + Q+L+GL + H+H
Sbjct: 68 LDVI--HTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 123
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPE--LYEE 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE L +
Sbjct: 124 -VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYT-HEVV-TLWYRAPEILLGXK 179
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 295
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 113/262 (43%), Gaps = 14/262 (5%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA V R G E A + S +L E ++ R LK+ I+ +
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDH--QKLEREARICRLLKHPNIVRLH 69
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
++ + L F ++ T G L + S +Q+LE + H H I+
Sbjct: 70 DSISEEGFHYLVF--DLVTGGELFEDIVAREYYSEADASHCIQQILESVN--HCHLNGIV 125
Query: 152 HRDLNCSNIFI--NGNIGQVKIGDLGFA-AIVGRSHAAHSIIGTPEYMAPELYEED-YTE 207
HRDL N+ + VK+ D G A + G A GTP Y++PE+ +D Y +
Sbjct: 126 HRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGK 185
Query: 208 MVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVK--PQALNKVKDPEVKAFIEKC 265
VD+++ G+ L ++ P+ + D ++Y+++ G P PE K I K
Sbjct: 186 PVDMWACGVILYILLVGYPPFWDEDQ-HRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKM 244
Query: 266 IA-QPRARPSASELLKDPFFSE 286
+ P R +ASE LK P+ +
Sbjct: 245 LTINPAKRITASEALKHPWICQ 266
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 132/299 (44%), Gaps = 46/299 (15%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+GSGA V A+D +VA +LS + + R + E++LL+ LK++ +I
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVK--KLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 92 SVW-----LDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
V+ ++D ++ +L K + +S + ++ Q+L GL+Y+H+
Sbjct: 94 DVFTPATSIEDFSEV--YLVTTLMGADLNNIVKS-QALSDEHVQFLVYQLLRGLKYIHS- 149
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEE--D 204
IIHRDL SN+ +N + +++I D G A + + T Y APE+
Sbjct: 150 -AGIIHRDLKPSNVAVNED-SELRILDFGLARQADEEMTGY--VATRWYRAPEIMLNWMH 205
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYK--KVTGGVKPQALNKVKDPEVKAFI 262
Y + VDI+S G + E++ + + D + ++ + +V G P+ L K+ + +I
Sbjct: 206 YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYI 265
Query: 263 EKCIAQPR---------------------------ARPSASELLKDPFFSELNDDDSEP 294
+ P+ R SA+E L +FS+ +D + EP
Sbjct: 266 QSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEP 324
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 116/266 (43%), Gaps = 15/266 (5%)
Query: 28 YSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
Y D+ G GA V R G E A + S +L E ++ R LK+ I
Sbjct: 9 YEDI-GKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDH--QKLEREARICRLLKHSNI 65
Query: 88 IVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHE 147
+ + ++ + L F ++ T G L + S +Q+LE + LH H+
Sbjct: 66 VRLHDSISEEGFHYLVF--DLVTGGELFEDIVAREYYSEADASHCIQQILEAV--LHCHQ 121
Query: 148 PCIIHRDLNCSNIFINGNI--GQVKIGDLGFA-AIVGRSHAAHSIIGTPEYMAPE-LYEE 203
++HRDL N+ + VK+ D G A + G A GTP Y++PE L +E
Sbjct: 122 MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKE 181
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVK--PQALNKVKDPEVKAF 261
Y + VDI++ G+ L ++ P+ + D K+Y+++ G P PE K
Sbjct: 182 AYGKPVDIWACGVILYILLVGYPPFWDEDQ-HKLYQQIKAGAYDFPSPEWDTVTPEAKNL 240
Query: 262 IEKCIA-QPRARPSASELLKDPFFSE 286
I + + P R +A E LK P+ +
Sbjct: 241 INQMLTINPAKRITAHEALKHPWVCQ 266
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 105/231 (45%), Gaps = 32/231 (13%)
Query: 8 MSDRDGEPFVEVDPSGRFGRYSDLLGSGAVKKV----YRAFDQEEGIEVAWNQVRLSHFS 63
DRD F E R ++ LG G V Y G VA +L H +
Sbjct: 2 FEDRDPTQFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK--KLQHST 54
Query: 64 EDPVLVNRLHSEVQLLRTLKN----KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRK 119
E+ + E+++L++L++ KY VCYS L I E G+LR Y +
Sbjct: 55 EEHL--RDFEREIEILKSLQHDNIVKYKGVCYSA----GRRNLKLIMEYLPYGSLRDYLQ 108
Query: 120 KH--RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFA 177
H R IK L +++ Q+ +G+EYL T IHRDL NI + N +VKIGD G
Sbjct: 109 AHAERIDHIKLL-QYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLT 164
Query: 178 AIVGRSHAAHSIIGTPE----YMAPE-LYEEDYTEMVDIYSFGLCLLEMVT 223
++ + + E + APE L E ++ D++SFG+ L E+ T
Sbjct: 165 KVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 123/273 (45%), Gaps = 16/273 (5%)
Query: 21 PSGRFGRY--SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQL 78
PS RY ++LG G + +V+ A D + +VA +R + + DP R E Q
Sbjct: 7 PSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLR-ADLARDPSFYLRFRREAQN 65
Query: 79 LRTLKNKYIIVCYSVW-LDDQHNTLNFITEVCTSG-NLRTYRKKHRHVSIKALKKWSKQV 136
L + I+ Y + L +I G LR ++ K +
Sbjct: 66 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA 125
Query: 137 LEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAA----HSIIGT 192
+ L + +H+ IIHRD+ +NI I+ VK+ D G A + S + ++IGT
Sbjct: 126 CQALNF--SHQNGIIHRDVKPANIMISAT-NAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
Query: 193 PEYMAPELYEEDYTEM-VDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVT-GGVKPQAL 250
+Y++PE D + D+YS G L E++T E P++ V+ Y+ V + P A
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSAR 242
Query: 251 NKVKDPEVKAFIEKCIAQ-PRAR-PSASELLKD 281
++ ++ A + K +A+ P R +A+E+ D
Sbjct: 243 HEGLSADLDAVVLKALAKNPENRYQTAAEMRAD 275
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 122/273 (44%), Gaps = 16/273 (5%)
Query: 21 PSGRFGRY--SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQL 78
PS RY ++LG G + +V+ A D + +VA +R + + DP R E Q
Sbjct: 7 PSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLR-ADLARDPSFYLRFRREAQN 65
Query: 79 LRTLKNKYIIVCYSVW-LDDQHNTLNFITEVCTSG-NLRTYRKKHRHVSIKALKKWSKQV 136
L + I+ Y + L +I G LR ++ K +
Sbjct: 66 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA 125
Query: 137 LEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS----HAAHSIIGT 192
+ L + +H+ IIHRD+ +NI I+ VK+ D G A + S ++IGT
Sbjct: 126 CQALNF--SHQNGIIHRDVKPANILISAT-NAVKVVDFGIARAIADSGNSVXQTAAVIGT 182
Query: 193 PEYMAPELYEEDYTEM-VDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVT-GGVKPQAL 250
+Y++PE D + D+YS G L E++T E P++ V+ Y+ V + P A
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSAR 242
Query: 251 NKVKDPEVKAFIEKCIAQ-PRAR-PSASELLKD 281
++ ++ A + K +A+ P R +A+E+ D
Sbjct: 243 HEGLSADLDAVVLKALAKNPENRYQTAAEMRAD 275
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 122/268 (45%), Gaps = 16/268 (5%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV-RLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIV 89
+LG G+ +V + D+ E A + + S ++D + R EV+LL+ L + I+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR---EVELLKKLDHPNIMK 85
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPC 149
+ + D ++ + E+ T G L K + S + KQV G+ Y+H H
Sbjct: 86 LFEILEDS--SSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN-- 141
Query: 150 IIHRDLNCSNIFINGNIGQ--VKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEEDYTE 207
I+HRDL NI + +KI D G + ++ IGT Y+APE+ Y E
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDE 201
Query: 208 MVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK 264
D++S G+ L +++ P+ +E D + ++ PQ + + K I K
Sbjct: 202 KCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW--RTISDDAKDLIRK 259
Query: 265 CIA-QPRARPSASELLKDPFFSELNDDD 291
+ P R +A++ L+ P+ + + ++
Sbjct: 260 MLTFHPSLRITATQCLEHPWIQKYSSEE 287
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 120/269 (44%), Gaps = 18/269 (6%)
Query: 30 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNR-LHSEVQLLRTLKNKYII 88
+++G G V R ++E G + A V ++ F+ P L L E + LK+ +I+
Sbjct: 32 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 91
Query: 89 VCYSVWLDDQHNTLNFITEVCTSGNL---RTYRKKHRHVSIKALKK-WSKQVLEGLEYLH 144
+ D L + E +L R V +A+ + +Q+LE L Y H
Sbjct: 92 ELLETYSSD--GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 149
Query: 145 THEPCIIHRDL--NCSNIFINGNIGQVKIGDLGFAAIVGRSH-AAHSIIGTPEYMAPELY 201
+ IIHRD+ +C + N VK+G G A +G S A +GTP +MAPE+
Sbjct: 150 DNN--IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV 207
Query: 202 E-EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG---VKPQALNKVKDPE 257
+ E Y + VD++ G+ L +++ +P+ + ++++ + G + P+ + + +
Sbjct: 208 KREPYGKPVDVWGCGVILFILLSGCLPFY--GTKERLFEGIIKGKYKMNPRQWSHISESA 265
Query: 258 VKAFIEKCIAQPRARPSASELLKDPFFSE 286
+ P R + E L P+ E
Sbjct: 266 KDLVRRMLMLDPAERITVYEALNHPWLKE 294
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 120/269 (44%), Gaps = 18/269 (6%)
Query: 30 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNR-LHSEVQLLRTLKNKYII 88
+++G G V R ++E G + A V ++ F+ P L L E + LK+ +I+
Sbjct: 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 89 VCYSVWLDDQHNTLNFITEVCTSGNL---RTYRKKHRHVSIKALKK-WSKQVLEGLEYLH 144
+ D L + E +L R V +A+ + +Q+LE L Y H
Sbjct: 90 ELLETYSSD--GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 145 THEPCIIHRDL--NCSNIFINGNIGQVKIGDLGFAAIVGRSH-AAHSIIGTPEYMAPELY 201
+ IIHRD+ +C + N VK+G G A +G S A +GTP +MAPE+
Sbjct: 148 DNN--IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 202 E-EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG---VKPQALNKVKDPE 257
+ E Y + VD++ G+ L +++ +P+ + ++++ + G + P+ + + +
Sbjct: 206 KREPYGKPVDVWGCGVILFILLSGCLPFY--GTKERLFEGIIKGKYKMNPRQWSHISESA 263
Query: 258 VKAFIEKCIAQPRARPSASELLKDPFFSE 286
+ P R + E L P+ E
Sbjct: 264 KDLVRRMLMLDPAERITVYEALNHPWLKE 292
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 74
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E +L+ + + + +K + Q+L+GL + H+H
Sbjct: 75 LDVI--HTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 130
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELYE--E 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE+ +
Sbjct: 131 -VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYT-HEVV-TLWYRAPEILLGCK 186
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 246
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 247 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 302
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 67
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E +L+ + + + +K + Q+L+GL + H+H
Sbjct: 68 LDVI--HTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHR- 123
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELYE--E 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE+ +
Sbjct: 124 -VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYT-HEVV-TLWYRAPEILLGCK 179
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 295
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 71
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E +L+ + + + +K + Q+L+GL + H+H
Sbjct: 72 LDVI--HTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 127
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELYE--E 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE+ +
Sbjct: 128 -VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYT-HEVV-TLWYRAPEILLGCK 183
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 243
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 244 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 299
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 118/260 (45%), Gaps = 16/260 (6%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV-RLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIV 89
+LG G+ +V + D+ E A + + S ++D + R EV+LL+ L + I+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR---EVELLKKLDHPNIMK 85
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPC 149
+ + D ++ + E+ T G L K + S + KQV G+ Y+H H
Sbjct: 86 LFEILED--SSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN-- 141
Query: 150 IIHRDLNCSNIFINGNIGQ--VKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEEDYTE 207
I+HRDL NI + +KI D G + ++ IGT Y+APE+ Y E
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDE 201
Query: 208 MVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK 264
D++S G+ L +++ P+ +E D + ++ PQ + + K I K
Sbjct: 202 KCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW--RTISDDAKDLIRK 259
Query: 265 CIA-QPRARPSASELLKDPF 283
+ P R +A++ L+ P+
Sbjct: 260 MLTFHPSLRITATQCLEHPW 279
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 121/267 (45%), Gaps = 16/267 (5%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV-RLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIV 89
+LG G+ +V + D+ E A + + S ++D + R EV+LL+ L + I+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR---EVELLKKLDHPNIMK 85
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPC 149
+ + D ++ + E+ T G L K + S + KQV G+ Y+H H
Sbjct: 86 LFEILEDS--SSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN-- 141
Query: 150 IIHRDLNCSNIFINGNIGQ--VKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEEDYTE 207
I+HRDL NI + +KI D G + ++ IGT Y+APE+ Y E
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDE 201
Query: 208 MVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK 264
D++S G+ L +++ P+ +E D + ++ PQ + + K I K
Sbjct: 202 KCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW--RTISDDAKDLIRK 259
Query: 265 CIA-QPRARPSASELLKDPFFSELNDD 290
+ P R +A++ L+ P+ + + +
Sbjct: 260 MLTFHPSLRITATQCLEHPWIQKYSSE 286
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 67
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E +L+ + + + +K + Q+L+GL + H+H
Sbjct: 68 LDVI--HTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 123
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELYE--E 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE+ +
Sbjct: 124 -VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYT-HEVV-TLWYRAPEILLGCK 179
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 295
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 67
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E +L+ + + + +K + Q+L+GL + H+H
Sbjct: 68 LDVI--HTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 123
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELYE--E 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE+ +
Sbjct: 124 -VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYT-HEVV-TLWYRAPEILLGCK 179
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 295
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 66
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E +L+ + + + +K + Q+L+GL + H+H
Sbjct: 67 LDVI--HTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 122
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELYE--E 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE+ +
Sbjct: 123 -VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYT-HEVV-TLWYRAPEILLGCK 178
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 294
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 66
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E +L+ + + + +K + Q+L+GL + H+H
Sbjct: 67 LDVI--HTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 122
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELYE--E 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE+ +
Sbjct: 123 -VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYT-HEVV-TLWYRAPEILLGCK 178
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 294
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 68
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E +L+ + + + +K + Q+L+GL + H+H
Sbjct: 69 LDVI--HTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 124
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELYE--E 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE+ +
Sbjct: 125 -VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYT-HEVV-TLWYRAPEILLGCK 180
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 296
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 68
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E +L+ + + + +K + Q+L+GL + H+H
Sbjct: 69 LDVI--HTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 124
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELYE--E 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE+ +
Sbjct: 125 -VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYX-HEVV-TLWYRAPEILLGCK 180
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 296
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 69
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E +L+ + + + +K + Q+L+GL + H+H
Sbjct: 70 LDVI--HTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 125
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELYE--E 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE+ +
Sbjct: 126 -VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYX-HEVV-TLWYRAPEILLGCK 181
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 297
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 67
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E +L+ + + + +K + Q+L+GL + H+H
Sbjct: 68 LDVI--HTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 123
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELYE--E 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE+ +
Sbjct: 124 -VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYX-HEVV-TLWYRAPEILLGCK 179
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 295
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 67
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E +L+ + + + +K + Q+L+GL + H+H
Sbjct: 68 LDVI--HTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 123
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELYE--E 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE+ +
Sbjct: 124 -VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYX-HEVV-TLWYRAPEILLGCK 179
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 295
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 71
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E +L+ + + + +K + Q+L+GL + H+H
Sbjct: 72 LDVI--HTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 127
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELYE--E 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE+ +
Sbjct: 128 -VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYX-HEVV-TLWYRAPEILLGCK 183
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 243
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 244 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 299
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 66
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E +L+ + + + +K + Q+L+GL + H+H
Sbjct: 67 LDVI--HTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 122
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELYE--E 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE+ +
Sbjct: 123 -VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYX-HEVV-TLWYRAPEILLGCK 178
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 294
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 68
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E +L+ + + + +K + Q+L+GL + H+H
Sbjct: 69 LDVI--HTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 124
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELYE--E 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE+ +
Sbjct: 125 -VLHRDLKPENLLINTE-GAIKLADFGLARAFGVPVRTYX-HEVV-TLWYRAPEILLGCK 180
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 296
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 70
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E +L+ + + + +K + Q+L+GL + H+H
Sbjct: 71 LDVI--HTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 126
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELYE--E 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE+ +
Sbjct: 127 -VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYX-HEVV-TLWYRAPEILLGCK 182
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 298
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 69
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E +L+ + + + +K + Q+L+GL + H+H
Sbjct: 70 LDVI--HTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 125
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELYE--E 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE+ +
Sbjct: 126 -VLHRDLKPENLLINTE-GAIKLADFGLARAFGVPVRTYX-HEVV-TLWYRAPEILLGCK 181
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 297
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 69
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E +L+ + + + +K + Q+L+GL + H+H
Sbjct: 70 LDVI--HTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 125
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELYE--E 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE+ +
Sbjct: 126 -VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYX-HEVV-TLWYRAPEILLGCK 181
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 297
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 87/164 (53%), Gaps = 9/164 (5%)
Query: 69 VNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKA 128
V + E+Q+++ L++ +++ + + D++ + + ++ G+LR + +++ H +
Sbjct: 59 VRNVFKELQIMQGLEHPFLVNLWYSFQDEE--DMFMVVDLLLGGDLRYHLQQNVHFKEET 116
Query: 129 LKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS 188
+K + +++ L+YL IIHRD+ NI ++ + G V I D AA++ R +
Sbjct: 117 VKLFICELVMALDYLQNQR--IIHRDMKPDNILLDEH-GHVHITDFNIAAMLPRETQITT 173
Query: 189 IIGTPEYMAPELYEE----DYTEMVDIYSFGLCLLEMVTMEIPY 228
+ GT YMAPE++ Y+ VD +S G+ E++ PY
Sbjct: 174 MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY 217
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 68
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E +L+ + + + +K + Q+L+GL + H+H
Sbjct: 69 LDVI--HTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 124
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELYE--E 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE+ +
Sbjct: 125 -VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYX-HEVV-TLWYRAPEILLGCK 180
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 296
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 70
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E +L+ + + + +K + Q+L+GL + H+H
Sbjct: 71 LDVI--HTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 126
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELYE--E 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE+ +
Sbjct: 127 -VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYX-HEVV-TLWYRAPEILLGCK 182
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 298
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 67
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E +L+ + + + +K + Q+L+GL + H+H
Sbjct: 68 LDVI--HTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 123
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELYE--E 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE+ +
Sbjct: 124 -VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYX-HEVV-TLWYRAPEILLGCK 179
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 295
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 66
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E +L+ + + + +K + Q+L+GL + H+H
Sbjct: 67 LDVI--HTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 122
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELYE--E 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE+ +
Sbjct: 123 -VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYX-HEVV-TLWYRAPEILLGCK 178
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 294
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 67
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E +L+ + + + +K + Q+L+GL + H+H
Sbjct: 68 LDVI--HTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 123
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELYE--E 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE+ +
Sbjct: 124 -VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYT-HEVV-TLWYRAPEILLGCK 179
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 295
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 66
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E +L+ + + + +K + Q+L+GL + H+H
Sbjct: 67 LDVI--HTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 122
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELYE--E 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE+ +
Sbjct: 123 -VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYT-HEVV-TLWYRAPEILLGCK 178
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 294
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 132/299 (44%), Gaps = 46/299 (15%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+GSGA V A+D +VA +LS + + R + E++LL+ LK++ +I
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVK--KLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 92 SVW-----LDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
V+ ++D ++ +L K + +S + ++ Q+L GL+Y+H+
Sbjct: 94 DVFTPATSIEDFSEV--YLVTTLMGADLNNI-VKCQALSDEHVQFLVYQLLRGLKYIHS- 149
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEE--D 204
IIHRDL SN+ +N + +++I D G A + + T Y APE+
Sbjct: 150 -AGIIHRDLKPSNVAVNED-SELRILDFGLARQADEEMTGY--VATRWYRAPEIMLNWMH 205
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYK--KVTGGVKPQALNKVKDPEVKAFI 262
Y + VDI+S G + E++ + + D + ++ + +V G P+ L K+ + +I
Sbjct: 206 YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYI 265
Query: 263 EKCIAQPR---------------------------ARPSASELLKDPFFSELNDDDSEP 294
+ P+ R SA+E L +FS+ +D + EP
Sbjct: 266 QSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEP 324
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 67
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E +L+ + + + +K + Q+L+GL + H+H
Sbjct: 68 LDVI--HTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 123
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELYE--E 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE+ +
Sbjct: 124 -VLHRDLKPENLLINTE-GAIKLADFGLARAFGVPVRTYX-HEVV-TLWYRAPEILLGCK 179
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 295
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 19/211 (9%)
Query: 24 RFGRYSDLLGSGAVKKV----YRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLL 79
R +Y LG G V Y G VA Q++ S P E+Q+L
Sbjct: 10 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS----GPDQQRDFQREIQIL 65
Query: 80 RTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLE 138
+ L + +I+ V +L + E SG LR + ++HR + L +S Q+ +
Sbjct: 66 KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICK 125
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPE---- 194
G+EYL + +HRDL NI + VKI D G A ++ + ++ P
Sbjct: 126 GMEYLGSRR--CVHRDLAARNILVESE-AHVKIADFGLAKLLPLD-KDYYVVREPGQSPI 181
Query: 195 -YMAPE-LYEEDYTEMVDIYSFGLCLLEMVT 223
+ APE L + ++ D++SFG+ L E+ T
Sbjct: 182 FWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
IVC S + L+FI ++ G+L + +H S ++ ++ +++ GLE H H
Sbjct: 253 FIVCMSYAFHTP-DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE--HMH 309
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEED-- 204
+++RDL +NI ++ + G V+I DLG A + H+ +GT YMAPE+ ++
Sbjct: 310 NRFVVYRDLKPANILLDEH-GHVRISDLGLACDFSKK-KPHASVGTHGYMAPEVLQKGVA 367
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK 264
Y D +S G L +++ P+ + + K L PE+++ +E
Sbjct: 368 YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEG 427
Query: 265 CIAQPRAR------PSASELLKDPFFSELN 288
+ + R A E+ + PFF L+
Sbjct: 428 LLQRDVNRRLGCLGRGAQEVKESPFFRSLD 457
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 111/233 (47%), Gaps = 31/233 (13%)
Query: 72 LHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRH-VSIKALK 130
L E+++LR L ++ I+ + +D N + I E SG+L+ Y K+++ +++K
Sbjct: 58 LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQL 117
Query: 131 KWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSII 190
K++ Q+ +G++YL + + +HRDL N+ + QVKIGD G + ++
Sbjct: 118 KYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESE-HQVKIGDFGLTKAIETDKEXXTVK 174
Query: 191 GTPE----YMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSV-AKIYKKVTGG 244
+ + APE L + + D++SFG+ L E++T Y + DS ++ K+ G
Sbjct: 175 DDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT----YCDSDSSPMALFLKMIGP 230
Query: 245 VKPQA-----LNKVKD-----------PEVKAFIEKCIA-QPRARPSASELLK 280
Q +N +K+ EV + KC QP R S L++
Sbjct: 231 THGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 283
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 19/211 (9%)
Query: 24 RFGRYSDLLGSGAVKKV----YRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLL 79
R +Y LG G V Y G VA Q++ S P E+Q+L
Sbjct: 11 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS----GPDQQRDFQREIQIL 66
Query: 80 RTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLE 138
+ L + +I+ V +L + E SG LR + ++HR + L +S Q+ +
Sbjct: 67 KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICK 126
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPE---- 194
G+EYL + +HRDL NI + VKI D G A ++ + ++ P
Sbjct: 127 GMEYLGSRR--CVHRDLAARNILVESE-AHVKIADFGLAKLLPLD-KDYYVVREPGQSPI 182
Query: 195 -YMAPE-LYEEDYTEMVDIYSFGLCLLEMVT 223
+ APE L + ++ D++SFG+ L E+ T
Sbjct: 183 FWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
IVC S + L+FI ++ G+L + +H S ++ ++ +++ GLE H H
Sbjct: 252 FIVCMSYAFHTP-DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE--HMH 308
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEED-- 204
+++RDL +NI ++ + G V+I DLG A + H+ +GT YMAPE+ ++
Sbjct: 309 NRFVVYRDLKPANILLDEH-GHVRISDLGLACDFSKK-KPHASVGTHGYMAPEVLQKGVA 366
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK 264
Y D +S G L +++ P+ + + K L PE+++ +E
Sbjct: 367 YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEG 426
Query: 265 CIAQPRAR------PSASELLKDPFFSELN 288
+ + R A E+ + PFF L+
Sbjct: 427 LLQRDVNRRLGCLGRGAQEVKESPFFRSLD 456
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 50/300 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 70
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E +L+ + + + +K + Q+L+GL + H+H
Sbjct: 71 LDVI--HTENKLYLVFE-HVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 126
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELYE--E 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE+ +
Sbjct: 127 -VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYX-HEVV-TLWYRAPEILLGCK 182
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSELNDDDSEPSP 296
Q +KV P + ++ + + + P R SA L PFF D ++P P
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ----DVTKPVP 298
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 123/273 (45%), Gaps = 16/273 (5%)
Query: 21 PSGRFGRY--SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQL 78
PS RY ++LG G + +V+ A D +VA +R + + DP R E Q
Sbjct: 7 PSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLR-ADLARDPSFYLRFRREAQN 65
Query: 79 LRTLKNKYIIVCYSVW-LDDQHNTLNFITEVCTSG-NLRTYRKKHRHVSIKALKKWSKQV 136
L + I+ Y+ + L +I G LR ++ K +
Sbjct: 66 AAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA 125
Query: 137 LEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAA----HSIIGT 192
+ L + +H+ IIHRD+ +NI I+ VK+ D G A + S + ++IGT
Sbjct: 126 CQALNF--SHQNGIIHRDVKPANIMISAT-NAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
Query: 193 PEYMAPELYEEDYTEM-VDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVT-GGVKPQAL 250
+Y++PE D + D+YS G L E++T E P++ V+ Y+ V + P A
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSAR 242
Query: 251 NKVKDPEVKAFIEKCIAQ-PRAR-PSASELLKD 281
++ ++ A + K +A+ P R +A+E+ D
Sbjct: 243 HEGLSADLDAVVLKALAKNPENRYQTAAEMRAD 275
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 132/299 (44%), Gaps = 46/299 (15%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+GSGA V A+D +VA +LS + + R + E++LL+ LK++ +I
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVK--KLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 92 SVW-----LDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
V+ ++D ++ +L K + +S + ++ Q+L GL+Y+H+
Sbjct: 86 DVFTPATSIEDFSEV--YLVTTLMGADLNNI-VKCQALSDEHVQFLVYQLLRGLKYIHS- 141
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEE--D 204
IIHRDL SN+ +N + +++I D G A + + T Y APE+
Sbjct: 142 -AGIIHRDLKPSNVAVNEDC-ELRILDFGLARQADEEMTGY--VATRWYRAPEIMLNWMH 197
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYK--KVTGGVKPQALNKVKDPEVKAFI 262
Y + VDI+S G + E++ + + D + ++ + +V G P+ L K+ + +I
Sbjct: 198 YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYI 257
Query: 263 EKCIAQPR---------------------------ARPSASELLKDPFFSELNDDDSEP 294
+ P+ R SA+E L +FS+ +D + EP
Sbjct: 258 QSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEP 316
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 130/290 (44%), Gaps = 46/290 (15%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVC 90
+G G VY+A ++ G VA ++RL +E P R E+ LL+ L + I+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKL 67
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEP 148
V N L + E +L+ + + + +K + Q+L+GL + H+H
Sbjct: 68 LDV--IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 123
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELYE--E 203
++HRDL N+ IN G +K+ D G A G R++ H ++ T Y APE+ +
Sbjct: 124 -VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYX-HEVV-TLWYRAPEILLGCK 179
Query: 204 DYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKK-------VTGGV------KP 247
Y+ VDI+S G EMVT + SE D + +I++ V GV KP
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 248 -------QALNKVKDP---EVKAFIEKCI-AQPRARPSASELLKDPFFSE 286
Q +KV P + ++ + + + P R SA L PFF +
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 119/271 (43%), Gaps = 23/271 (8%)
Query: 30 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHS----EVQLLRTLKNK 85
D++G G V R + G E A + ++ P + + E +LR +
Sbjct: 100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGH 159
Query: 86 YIIVCYSVWLDDQHNTLNF---ITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEY 142
I+ L D + + +F + ++ G L Y + +S K + + +LE + +
Sbjct: 160 PHIIT----LIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSF 215
Query: 143 LHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYE 202
LH + I+HRDL NI ++ N+ Q+++ D GF+ + + GTP Y+APE+ +
Sbjct: 216 LHANN--IVHRDLKPENILLDDNM-QIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILK 272
Query: 203 -------EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALN-KVK 254
Y + VD+++ G+ L ++ P+ + + + G + + +
Sbjct: 273 CSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDR 332
Query: 255 DPEVKAFIEKCI-AQPRARPSASELLKDPFF 284
VK I + + P AR +A + L+ PFF
Sbjct: 333 SSTVKDLISRLLQVDPEARLTAEQALQHPFF 363
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
IVC S + L+FI ++ G+L + +H S ++ ++ +++ GLE H H
Sbjct: 253 FIVCMSYAFHTP-DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE--HMH 309
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEED-- 204
+++RDL +NI ++ + G V+I DLG A + H+ +GT YMAPE+ ++
Sbjct: 310 NRFVVYRDLKPANILLDEH-GHVRISDLGLACDFSKK-KPHASVGTHGYMAPEVLQKGVA 367
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK 264
Y D +S G L +++ P+ + + K L PE+++ +E
Sbjct: 368 YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEG 427
Query: 265 CIAQPRAR------PSASELLKDPFFSELN 288
+ + R A E+ + PFF L+
Sbjct: 428 LLQRDVNRRLGCLGRGAQEVKESPFFRSLD 457
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
IVC S + L+FI ++ G+L + +H S ++ ++ +++ GLE H H
Sbjct: 253 FIVCMSYAFHTP-DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE--HMH 309
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEED-- 204
+++RDL +NI ++ + G V+I DLG A + H+ +GT YMAPE+ ++
Sbjct: 310 NRFVVYRDLKPANILLDEH-GHVRISDLGLACDFSKK-KPHASVGTHGYMAPEVLQKGVA 367
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK 264
Y D +S G L +++ P+ + + K L PE+++ +E
Sbjct: 368 YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEG 427
Query: 265 CIAQPRAR------PSASELLKDPFFSELN 288
+ + R A E+ + PFF L+
Sbjct: 428 LLQRDVNRRLGCLGRGAQEVKESPFFRSLD 457
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 19/211 (9%)
Query: 24 RFGRYSDLLGSGAVKKV----YRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLL 79
R +Y LG G V Y G VA Q++ S P E+Q+L
Sbjct: 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS----GPDQQRDFQREIQIL 78
Query: 80 RTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLE 138
+ L + +I+ V +L + E SG LR + ++HR + L +S Q+ +
Sbjct: 79 KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICK 138
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPE---- 194
G+EYL + +HRDL NI + VKI D G A ++ + ++ P
Sbjct: 139 GMEYLGSRR--CVHRDLAARNILVESE-AHVKIADFGLAKLLPLD-KDYYVVREPGQSPI 194
Query: 195 -YMAPE-LYEEDYTEMVDIYSFGLCLLEMVT 223
+ APE L + ++ D++SFG+ L E+ T
Sbjct: 195 FWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 125/275 (45%), Gaps = 20/275 (7%)
Query: 21 PSGRFGRY--SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQL 78
PS RY ++LG G + +V+ A D + +VA +R + + DP R E Q
Sbjct: 7 PSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLR-ADLARDPSFYLRFRREAQN 65
Query: 79 LRTLKNKYIIVCYSVW-LDDQHNTLNFITEVCTSG-NLRTYRKKHRHVSIKALKKWSKQV 136
L + I+ Y + L +I G LR ++ K +
Sbjct: 66 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA 125
Query: 137 LEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAA----HSIIGT 192
+ L + +H+ IIHRD+ +NI I+ VK+ D G A + S + ++IGT
Sbjct: 126 CQALNF--SHQNGIIHRDVKPANIMISAT-NAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
Query: 193 PEYMAPELYEEDYTEM-VDIYSFGLCLLEMVTMEIPYS--ECDSVAKIYKKVT-GGVKPQ 248
+Y++PE D + D+YS G L E++T E P++ DSVA Y+ V + P
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVA--YQHVREDPIPPS 240
Query: 249 ALNKVKDPEVKAFIEKCIAQ-PRAR-PSASELLKD 281
A ++ ++ A + K +A+ P R +A+E+ D
Sbjct: 241 ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRAD 275
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 129/291 (44%), Gaps = 46/291 (15%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+G G V++A ++E VA +VRL +D + + E+ LL+ LK+K I+ +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLD--DDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
V D+ TL F E C + + + + + +K + Q+L+GL + H+ ++
Sbjct: 68 DVLHSDKKLTLVF--EFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN--VL 123
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELY--EEDYT 206
HRDL N+ IN N G++K+ + G A G R ++A + T Y P++ + Y+
Sbjct: 124 HRDLKPQNLLINRN-GELKLANFGLARAFGIPVRCYSAEVV--TLWYRPPDVLFGAKLYS 180
Query: 207 EMVDIYSFGLCLLEMVTMEIPYSEC----DSVAKIYKKVTGGVKPQALNKVKDPEVKAF- 261
+D++S G E+ P D + +I++ + + Q + K P+ K +
Sbjct: 181 TSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYP 240
Query: 262 -------------------------IEKCIAQPRARPSASELLKDPFFSEL 287
+ KC P R SA E L+ P+FS+
Sbjct: 241 MYPATTSLVNVVPKLNATGRDLLQNLLKC--NPVQRISAEEALQHPYFSDF 289
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 122/273 (44%), Gaps = 16/273 (5%)
Query: 21 PSGRFGRY--SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQL 78
PS RY ++LG G + +V+ A D +VA +R + + DP R E Q
Sbjct: 7 PSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLR-ADLARDPSFYLRFRREAQN 65
Query: 79 LRTLKNKYIIVCYSVW-LDDQHNTLNFITEVCTSG-NLRTYRKKHRHVSIKALKKWSKQV 136
L + I+ Y + L +I G LR ++ K +
Sbjct: 66 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA 125
Query: 137 LEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAA----HSIIGT 192
+ L + +H+ IIHRD+ +NI I+ VK+ D G A + S + ++IGT
Sbjct: 126 CQALNF--SHQNGIIHRDVKPANIMISAT-NAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
Query: 193 PEYMAPELYEEDYTEM-VDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVT-GGVKPQAL 250
+Y++PE D + D+YS G L E++T E P++ V+ Y+ V + P A
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSAR 242
Query: 251 NKVKDPEVKAFIEKCIAQ-PRAR-PSASELLKD 281
++ ++ A + K +A+ P R +A+E+ D
Sbjct: 243 HEGLSADLDAVVLKALAKNPENRYQTAAEMRAD 275
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 123/266 (46%), Gaps = 19/266 (7%)
Query: 29 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYII 88
+++LG G +V++ + G+++A ++ + + N E+ ++ L + +I
Sbjct: 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKN----EISVMNQLDHANLI 149
Query: 89 VCYSVWLDDQHNTLNFITEVCTSGNL--RTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
Y + + N + + E G L R + + + + + KQ+ EG+ H H
Sbjct: 150 QLYDAF--ESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTIL-FMKQICEGIR--HMH 204
Query: 147 EPCIIHRDLNCSNIF-INGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEEDY 205
+ I+H DL NI +N + Q+KI D G A GTPE++APE+ D+
Sbjct: 205 QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDF 264
Query: 206 TEM-VDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTG---GVKPQALNKVKDPEVKAF 261
D++S G+ +++ P+ D+ A+ + ++ + + + E K F
Sbjct: 265 VSFPTDMWSVGVIAYMLLSGLSPFL-GDNDAETLNNILACRWDLEDEEFQDISE-EAKEF 322
Query: 262 IEKCIAQPRA-RPSASELLKDPFFSE 286
I K + + ++ R SASE LK P+ S+
Sbjct: 323 ISKLLIKEKSWRISASEALKHPWLSD 348
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G++ ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 113 NSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 170
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +K+ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 171 NLLIDQQ-GYIKVADFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 227 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 253
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G++ ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 113 NSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 170
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +K+ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 171 NLLIDQQ-GYIKVADFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 227 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 253
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 24/219 (10%)
Query: 31 LLGSGAVKKVYRAFDQEEG----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
+LGSGA VY+ EG I VA ++R + P + E ++ ++ N +
Sbjct: 19 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNPH 75
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHT 145
+ + L +T+ IT++ G L Y ++H+ ++ + L W Q+ EG+ YL
Sbjct: 76 VCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLED 132
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---EYMAPE-LY 201
++HRDL N+ + VKI D G A ++G + G ++MA E +
Sbjct: 133 RR--LVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 189
Query: 202 EEDYTEMVDIYSFGLCLLEMVTM------EIPYSECDSV 234
YT D++S+G+ + E++T IP SE S+
Sbjct: 190 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 228
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 126/277 (45%), Gaps = 35/277 (12%)
Query: 30 DLLGSGAVKK-VYRA-FDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
D+LG GA VYR FD + VA ++ FS +R EVQLLR
Sbjct: 30 DVLGHGAEGTIVYRGMFDNRD---VAVKRILPECFS----FADR---EVQLLRESDEHPN 79
Query: 88 IVCYSVWLDDQHNTLNFITEVCTSGNLRTY--RKKHRHVSIKALKKWSKQVLEGLEYLHT 145
++ Y + ++ +I + L+ Y +K H+ ++ + +Q GL +LH+
Sbjct: 80 VIRY--FCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPIT-LLQQTTSGLAHLHS 136
Query: 146 HEPCIIHRDLNCSNIFIN--GNIGQVK--IGDLGFAA--IVGRSHAAH--SIIGTPEYMA 197
I+HRDL NI I+ G++K I D G VGR + + GT ++A
Sbjct: 137 LN--IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIA 194
Query: 198 PELYEEDYTE----MVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKV 253
PE+ ED E VDI+S G C+ V E + S+ + + G L+
Sbjct: 195 PEMLSEDCKENPTYTVDIFSAG-CVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPE 253
Query: 254 KDPEVKA--FIEKCIAQ-PRARPSASELLKDPFFSEL 287
K +V A IEK IA P+ RPSA +LK PFF L
Sbjct: 254 KHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSL 290
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 122/273 (44%), Gaps = 16/273 (5%)
Query: 21 PSGRFGRY--SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQL 78
PS RY ++LG G + +V+ A D +VA +R + + DP R E Q
Sbjct: 24 PSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLR-ADLARDPSFYLRFRREAQN 82
Query: 79 LRTLKNKYIIVCYSVW-LDDQHNTLNFITEVCTSG-NLRTYRKKHRHVSIKALKKWSKQV 136
L + I+ Y + L +I G LR ++ K +
Sbjct: 83 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA 142
Query: 137 LEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAA----HSIIGT 192
+ L + +H+ IIHRD+ +NI I+ VK+ D G A + S + ++IGT
Sbjct: 143 CQALNF--SHQNGIIHRDVKPANIMISAT-NAVKVMDFGIARAIADSGNSVTQTAAVIGT 199
Query: 193 PEYMAPELYEEDYTEM-VDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVT-GGVKPQAL 250
+Y++PE D + D+YS G L E++T E P++ V+ Y+ V + P A
Sbjct: 200 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSAR 259
Query: 251 NKVKDPEVKAFIEKCIAQ-PRAR-PSASELLKD 281
++ ++ A + K +A+ P R +A+E+ D
Sbjct: 260 HEGLSADLDAVVLKALAKNPENRYQTAAEMRAD 292
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 10/144 (6%)
Query: 150 IIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYE-----ED 204
IIHRD+ SNI ++ + G +K+ D G + + S A G YMAPE + +
Sbjct: 147 IIHRDIKPSNILLDRS-GNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQG 205
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK---DPEVKAF 261
Y D++S G+ L E+ T PY + +SV +V G PQ N + P F
Sbjct: 206 YDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINF 265
Query: 262 IEKCIAQPRA-RPSASELLKDPFF 284
+ C+ + + RP ELLK PF
Sbjct: 266 VNLCLTKDESKRPKYKELLKHPFI 289
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 114 NSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 171
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +K+ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 172 NLLIDQQ-GYIKVADFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 228 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 254
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 113 NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 170
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +K+ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 171 NLLIDQQ-GYIKVADFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 227 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 253
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 78/147 (53%), Gaps = 7/147 (4%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 134 NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 191
Query: 159 NIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGLC 217
N+ I+ G +++ D GFA V A ++ GTPEY+APE + + Y + VD ++ G+
Sbjct: 192 NLLIDQQ-GYIQVTDFGFAKRV--KGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVL 248
Query: 218 LLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 249 IYEMAAGYPPFF-ADQPIQIYEKIVSG 274
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 125/276 (45%), Gaps = 34/276 (12%)
Query: 31 LLGSGAVKKVYRAFDQEEG----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
+LGSGA VY+ EG I VA ++R + P + E ++ ++ N +
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNPH 81
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHT 145
+ + L +T+ IT++ G L Y ++H+ ++ + L W Q+ +G+ YL
Sbjct: 82 VCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---EYMAPE-LY 201
++HRDL N+ + VKI D G A ++G + G ++MA E +
Sbjct: 139 RR--LVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 202 EEDYTEMVDIYSFGLCLLEMVTM------EIPYSECDSVAKIYKKVTGGVKPQALNKVKD 255
YT D++S+G+ + E++T IP SE S+ + G PQ +
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-----KGERLPQP--PICT 248
Query: 256 PEVKAFIEKC-IAQPRARPSASELLKDPFFSELNDD 290
+V + KC + +RP EL+ + FS++ D
Sbjct: 249 IDVYMIMRKCWMIDADSRPKFRELIIE--FSKMARD 282
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 24/219 (10%)
Query: 31 LLGSGAVKKVYRAFDQEEG----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
+LGSGA VY+ EG I VA ++R + P + E ++ ++ N +
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNPH 78
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHT 145
+ + L +T+ IT++ G L Y ++H+ ++ + L W Q+ +G+ YL
Sbjct: 79 VCRLLGICLT---STVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---EYMAPE-LY 201
++HRDL N+ + VKI D G A ++G + G ++MA E +
Sbjct: 136 RR--LVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 202 EEDYTEMVDIYSFGLCLLEMVTM------EIPYSECDSV 234
YT D++S+G+ + E++T IP SE S+
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 231
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 125/276 (45%), Gaps = 34/276 (12%)
Query: 31 LLGSGAVKKVYRAFDQEEG----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
+LGSGA VY+ EG I VA ++R + P + E ++ ++ N +
Sbjct: 32 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNPH 88
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHT 145
+ + L +T+ IT++ G L Y ++H+ ++ + L W Q+ +G+ YL
Sbjct: 89 VCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 145
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---EYMAPE-LY 201
++HRDL N+ + VKI D G A ++G + G ++MA E +
Sbjct: 146 RR--LVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 202
Query: 202 EEDYTEMVDIYSFGLCLLEMVTM------EIPYSECDSVAKIYKKVTGGVKPQALNKVKD 255
YT D++S+G+ + E++T IP SE S+ + G PQ +
Sbjct: 203 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-----KGERLPQP--PICT 255
Query: 256 PEVKAFIEKC-IAQPRARPSASELLKDPFFSELNDD 290
+V + KC + +RP EL+ + FS++ D
Sbjct: 256 IDVYMIMRKCWMIDADSRPKFRELIIE--FSKMARD 289
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 90/214 (42%), Gaps = 25/214 (11%)
Query: 24 RFGRYSDLLGSGAVKKV----YRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLL 79
R +Y LG G V Y G VA Q++ S P E+Q+L
Sbjct: 7 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS----GPDQQRDFQREIQIL 62
Query: 80 RTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLE 138
+ L + +I+ V L + E SG LR + ++HR + L +S Q+ +
Sbjct: 63 KALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICK 122
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAI--------VGRSHAAHSII 190
G+EYL + +HRDL NI + VKI D G A + V R I
Sbjct: 123 GMEYLGSRR--CVHRDLAARNILVESE-AHVKIADFGLAKLLPLDKDXXVVREPGQSPIF 179
Query: 191 GTPEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVT 223
+ APE L + ++ D++SFG+ L E+ T
Sbjct: 180 ----WYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 117/246 (47%), Gaps = 18/246 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V A+D VA +LS ++ R + E+ L++ + +
Sbjct: 25 RYQNLKPIGSGAQGIVVAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
K II +V+ ++ + + E+ + + + + H + L Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL---LYQMLVGI 139
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE- 199
++LH+ IIHRDL SNI + + +KI D G A G S + T Y APE
Sbjct: 140 KHLHS--AGIIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 200 LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV--TGGVKPQALNKVKDPE 257
+ Y E VDI+S G+ + EM+ + + D + + K + G P+ + K++ P
Sbjct: 197 ILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ-PT 255
Query: 258 VKAFIE 263
V+ ++E
Sbjct: 256 VRTYVE 261
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 24/219 (10%)
Query: 31 LLGSGAVKKVYRAFDQEEG----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
+LGSGA VY+ EG I VA ++R + P + E ++ ++ N +
Sbjct: 28 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNPH 84
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHT 145
+ + L +T+ IT++ G L Y ++H+ ++ + L W Q+ +G+ YL
Sbjct: 85 VCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 141
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---EYMAPE-LY 201
++HRDL N+ + VKI D G A ++G + G ++MA E +
Sbjct: 142 RR--LVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 198
Query: 202 EEDYTEMVDIYSFGLCLLEMVTM------EIPYSECDSV 234
YT D++S+G+ + E++T IP SE S+
Sbjct: 199 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 237
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 24/219 (10%)
Query: 31 LLGSGAVKKVYRAFDQEEG----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
+LGSGA VY+ EG I VA ++R + P + E ++ ++ N +
Sbjct: 47 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNPH 103
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHT 145
+ + L +T+ IT++ G L Y ++H+ ++ + L W Q+ +G+ YL
Sbjct: 104 VCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 160
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---EYMAPE-LY 201
++HRDL N+ + VKI D G A ++G + G ++MA E +
Sbjct: 161 RR--LVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 217
Query: 202 EEDYTEMVDIYSFGLCLLEMVTM------EIPYSECDSV 234
YT D++S+G+ + E++T IP SE S+
Sbjct: 218 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 256
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 125/276 (45%), Gaps = 34/276 (12%)
Query: 31 LLGSGAVKKVYRAFDQEEG----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
+LGSGA VY+ EG I VA ++R + P + E ++ ++ N +
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNPH 78
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHT 145
+ + L +T+ IT++ G L Y ++H+ ++ + L W Q+ +G+ YL
Sbjct: 79 VCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---EYMAPE-LY 201
++HRDL N+ + VKI D G A ++G + G ++MA E +
Sbjct: 136 RR--LVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 202 EEDYTEMVDIYSFGLCLLEMVTM------EIPYSECDSVAKIYKKVTGGVKPQALNKVKD 255
YT D++S+G+ + E++T IP SE S+ + G PQ +
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-----KGERLPQP--PICT 245
Query: 256 PEVKAFIEKC-IAQPRARPSASELLKDPFFSELNDD 290
+V + KC + +RP EL+ + FS++ D
Sbjct: 246 IDVYMIMRKCWMIDADSRPKFRELIIE--FSKMARD 279
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 113 NSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 170
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +K+ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 171 NLMIDQQ-GYIKVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 227 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 253
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 24/219 (10%)
Query: 31 LLGSGAVKKVYRAFDQEEG----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
+LGSGA VY+ EG I VA ++R + P + E ++ ++ N +
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNPH 81
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHT 145
+ + L +T+ IT++ G L Y ++H+ ++ + L W Q+ +G+ YL
Sbjct: 82 VCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---EYMAPE-LY 201
++HRDL N+ + VKI D G A ++G + G ++MA E +
Sbjct: 139 RR--LVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 202 EEDYTEMVDIYSFGLCLLEMVTM------EIPYSECDSV 234
YT D++S+G+ + E++T IP SE S+
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 234
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 114 NSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 171
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +K+ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 172 NLMIDQQ-GYIKVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 228 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 254
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 114 NSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 171
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +K+ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 172 NLMIDQQ-GYIKVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 228 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 254
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 114 NSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 171
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +K+ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 172 NLMIDQQ-GYIKVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 228 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 254
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 24/219 (10%)
Query: 31 LLGSGAVKKVYRAFDQEEG----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
+LGSGA VY+ EG I VA ++R + P + E ++ ++ N +
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNPH 85
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHT 145
+ + L +T+ IT++ G L Y ++H+ ++ + L W Q+ +G+ YL
Sbjct: 86 VCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---EYMAPE-LY 201
++HRDL N+ + VKI D G A ++G + G ++MA E +
Sbjct: 143 RR--LVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 202 EEDYTEMVDIYSFGLCLLEMVTM------EIPYSECDSV 234
YT D++S+G+ + E++T IP SE S+
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 238
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 24/219 (10%)
Query: 31 LLGSGAVKKVYRAFDQEEG----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
+LGSGA VY+ EG I VA ++R + P + E ++ ++ N +
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNPH 80
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHT 145
+ + L +T+ IT++ G L Y ++H+ ++ + L W Q+ +G+ YL
Sbjct: 81 VCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---EYMAPE-LY 201
++HRDL N+ + VKI D G A ++G + G ++MA E +
Sbjct: 138 RR--LVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 202 EEDYTEMVDIYSFGLCLLEMVTM------EIPYSECDSV 234
YT D++S+G+ + E++T IP SE S+
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 233
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 24/219 (10%)
Query: 31 LLGSGAVKKVYRAFDQEEG----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
+LGSGA VY+ EG I VA ++R + P + E ++ ++ N +
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNPH 78
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHT 145
+ + L +T+ IT++ G L Y ++H+ ++ + L W Q+ +G+ YL
Sbjct: 79 VCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---EYMAPE-LY 201
++HRDL N+ + VKI D G A ++G + G ++MA E +
Sbjct: 136 RR--LVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 202 EEDYTEMVDIYSFGLCLLEMVTM------EIPYSECDSV 234
YT D++S+G+ + E++T IP SE S+
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 231
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 24/219 (10%)
Query: 31 LLGSGAVKKVYRAFDQEEG----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
+LGSGA VY+ EG I VA ++R + P + E ++ ++ N +
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNPH 81
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHT 145
+ + L +T+ IT++ G L Y ++H+ ++ + L W Q+ +G+ YL
Sbjct: 82 VCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---EYMAPE-LY 201
++HRDL N+ + VKI D G A ++G + G ++MA E +
Sbjct: 139 RR--LVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 202 EEDYTEMVDIYSFGLCLLEMVTM------EIPYSECDSV 234
YT D++S+G+ + E++T IP SE S+
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 234
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 129/290 (44%), Gaps = 31/290 (10%)
Query: 17 VEVDPSGRFG----RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRL 72
+ V+ S R G + +LG G+ KV A +E G A ++ +D V
Sbjct: 12 IGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDD-VECT 70
Query: 73 HSEVQLLRTLKN----KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKA 128
+E ++L +N + C+ + L F+ E G+L + +K R
Sbjct: 71 MTEKRILSLARNHPFLTQLFCCFQT-----PDRLFFVMEFVNGGDLMFHIQKSRRFDEAR 125
Query: 129 LKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA-IVGRSHAAH 187
+ ++ +++ L +LH + II+RDL N+ ++ G K+ D G +
Sbjct: 126 ARFYAAEIISALMFLH--DKGIIYRDLKLDNVLLDHE-GHCKLADFGMCKEGICNGVTTA 182
Query: 188 SIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG-- 244
+ GTP+Y+APE+ +E Y VD ++ G+ L EM+ P+ E ++ +++ +
Sbjct: 183 TFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPF-EAENEDDLFEAILNDEV 241
Query: 245 VKPQALNKVKDPEVKAFIEKCIAQPRARPSA------SELLKDPFFSELN 288
V P L++ +K+F+ K P R + +L+ PFF E++
Sbjct: 242 VYPTWLHEDATGILKSFMTK---NPTMRLGSLTQGGEHAILRHPFFKEID 288
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 129/280 (46%), Gaps = 27/280 (9%)
Query: 31 LLGSGAVKKVY---RAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
+LG+GA KV+ + + G A ++ + + +E Q+L ++
Sbjct: 61 VLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF 120
Query: 88 IVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHE 147
+V + L+ I + G L T+ + + ++ + +++ LE H H+
Sbjct: 121 LVTLHYAFQTE-TKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALE--HLHK 177
Query: 148 PCIIHRDLNCSNIFINGNIGQVKIGDLGFAA--IVGRSHAAHSIIGTPEYMAPELY---E 202
II+RD+ NI ++ N G V + D G + + + A+ GT EYMAP++ +
Sbjct: 178 LGIIYRDIKLENILLDSN-GHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGD 236
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPYS---ECDSVAKIYKKVTGGVK--PQALNKVKDPE 257
+ + VD +S G+ + E++T P++ E +S A+I +++ PQ ++ +
Sbjct: 237 SGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSAL---- 292
Query: 258 VKAFIEKCIAQ-PRAR-----PSASELLKDPFFSELNDDD 291
K I++ + + P+ R A E+ + FF ++N DD
Sbjct: 293 AKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDD 332
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 113 NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 170
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 171 NLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLAGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 227 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 253
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 120/273 (43%), Gaps = 18/273 (6%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY L +GSGA V AFD GI VA +LS ++ R + E+ LL+ + +
Sbjct: 23 RYQQLKPIGSGAQGIVCAAFDTVLGINVAVK--KLSRPFQNQTHAKRAYRELVLLKCVNH 80
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
K II +V+ ++ + + E+ + + + H + L Q+L G+
Sbjct: 81 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYL---LYQMLCGI 137
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE- 199
++LH+ IIHRDL SNI + + +KI D G A + + T Y APE
Sbjct: 138 KHLHS--AGIIHRDLKPSNIVVKSDC-TLKILDFGLARTASTNFMMTPYVVTRYYRAPEV 194
Query: 200 LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQA-LNKVKDPEV 258
+ Y E VDI+S G + E+V + + D + + K + P A P V
Sbjct: 195 ILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTV 254
Query: 259 KAFIEKCIAQPRARPSASELLKDPFFSELNDDD 291
+ ++E A P + EL D F ++ D
Sbjct: 255 RNYVENRPAYPGI--AFEELFPDWIFPSESERD 285
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 113 NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 170
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 171 NLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLXGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 227 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 253
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 119/288 (41%), Gaps = 44/288 (15%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG G V+ A ++ + A ++RL + + ++ EV+ L L++ I+ +
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPN---RELAREKVMREVKALAKLEHPGIVRYF 69
Query: 92 SVWLDDQHNT----------LNFITEVCTSGNLR-------TYRKKHRHVSIKALKKWSK 134
+ WL+ L ++C NL+ T ++ R V +
Sbjct: 70 NAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFL---- 125
Query: 135 QVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI----- 189
Q+ E +E+LH+ ++HRDL SNIF + VK+GD G + + ++
Sbjct: 126 QIAEAVEFLHSK--GLMHRDLKPSNIFFTMD-DVVKVGDFGLVTAMDQDEEEQTVLTPMP 182
Query: 190 --------IGTPEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKK 240
+GT YM+PE ++ Y+ VDI+S GL L E++ P+S +
Sbjct: 183 AYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL---YPFSTQMERVRTLTD 239
Query: 241 VTGGVKPQALNKVKDPEVKAFIEKCIAQPRARPSASELLKDPFFSELN 288
V P + E + P RP A ++++ F +L+
Sbjct: 240 VRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLD 287
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 110/235 (46%), Gaps = 30/235 (12%)
Query: 75 EVQLLR--TLKNKYIIVCYS-----VWLDDQHNTLNF---ITEVCTSGNLRTYRKKHRHV 124
EVQ LR TLK I+ S + L D + T F + ++ G L Y + +
Sbjct: 62 EVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTL 121
Query: 125 SIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH 184
S K +K + +LE + LH I+HRDL NI ++ ++ +K+ D GF+ +
Sbjct: 122 SEKETRKIMRALLEVICALHKLN--IVHRDLKPENILLDDDM-NIKLTDFGFSCQLDPGE 178
Query: 185 AAHSIIGTPEYMAPELYE-------EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKI 237
S+ GTP Y+APE+ E Y + VD++S G+ + ++ P+ + +
Sbjct: 179 KLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML 238
Query: 238 YKKVTGGVK---PQ---ALNKVKDPEVKAFIEKCIAQPRARPSASELLKDPFFSE 286
++G + P+ + VKD V F+ + QP+ R +A E L PFF +
Sbjct: 239 RMIMSGNYQFGSPEWDDYSDTVKDL-VSRFL---VVQPQKRYTAEEALAHPFFQQ 289
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 99 NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 156
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ ++ GTPEY+APE + + Y + VD ++ G+
Sbjct: 157 NLLIDQQ-GYIQVTDFGFAKRVKGRTW---TLCGTPEYLAPEIILSKGYNKAVDWWALGV 212
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 213 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 239
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 113 NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 170
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 171 NLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 227 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 253
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 117/246 (47%), Gaps = 18/246 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V A+D VA +LS ++ R + E+ L++ + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
K II +V+ ++ + + E+ + + + + H + L Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL---LYQMLVGI 139
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE- 199
++LH+ IIHRDL SNI + + +KI D G A G S + T Y APE
Sbjct: 140 KHLHS--AGIIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 200 LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV--TGGVKPQALNKVKDPE 257
+ Y E VDI+S G+ + EM+ + + D + + K + G P+ + K++ P
Sbjct: 197 ILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ-PT 255
Query: 258 VKAFIE 263
V+ ++E
Sbjct: 256 VRTYVE 261
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 125/276 (45%), Gaps = 34/276 (12%)
Query: 31 LLGSGAVKKVYRAFDQEEG----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
+LGSGA VY+ EG I VA ++R + P + E ++ ++ N +
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNPH 80
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHT 145
+ + L +T+ IT++ G L Y ++H+ ++ + L W Q+ +G+ YL
Sbjct: 81 VCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---EYMAPE-LY 201
++HRDL N+ + VKI D G A ++G + G ++MA E +
Sbjct: 138 RR--LVHRDLAARNVLVK-TPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 202 EEDYTEMVDIYSFGLCLLEMVTM------EIPYSECDSVAKIYKKVTGGVKPQALNKVKD 255
YT D++S+G+ + E++T IP SE S+ + G PQ +
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-----KGERLPQP--PICT 247
Query: 256 PEVKAFIEKC-IAQPRARPSASELLKDPFFSELNDD 290
+V + KC + +RP EL+ + FS++ D
Sbjct: 248 IDVYMIMRKCWMIDADSRPKFRELIIE--FSKMARD 281
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 125/276 (45%), Gaps = 34/276 (12%)
Query: 31 LLGSGAVKKVYRAFDQEEG----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
+LGSGA VY+ EG I VA ++R + P + E ++ ++ N +
Sbjct: 16 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNPH 72
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHT 145
+ + L +T+ IT++ G L Y ++H+ ++ + L W Q+ +G+ YL
Sbjct: 73 VCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 129
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---EYMAPE-LY 201
++HRDL N+ + VKI D G A ++G + G ++MA E +
Sbjct: 130 RR--LVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 186
Query: 202 EEDYTEMVDIYSFGLCLLEMVTM------EIPYSECDSVAKIYKKVTGGVKPQALNKVKD 255
YT D++S+G+ + E++T IP SE S+ + G PQ +
Sbjct: 187 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-----KGERLPQP--PICT 239
Query: 256 PEVKAFIEKC-IAQPRARPSASELLKDPFFSELNDD 290
+V + KC + +RP EL+ + FS++ D
Sbjct: 240 IDVYMIMVKCWMIDADSRPKFRELIIE--FSKMARD 273
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 114 NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 171
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ ++ GTPEY+APE + + Y + VD ++ G+
Sbjct: 172 NLLIDQQ-GYIQVTDFGFAKRVKGRTW---TLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 228 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 254
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 117/246 (47%), Gaps = 18/246 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V A+D VA +LS ++ R + E+ L++ + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
K II +V+ ++ + + E+ + + + + H + L Q+L G+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYL---LYQMLXGI 139
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE- 199
++LH+ IIHRDL SNI + + +KI D G A G S + T Y APE
Sbjct: 140 KHLHS--AGIIHRDLKPSNIVVKSD-XTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 200 LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV--TGGVKPQALNKVKDPE 257
+ Y E VDI+S G + EMV +I + D + + K + G P+ + K++ P
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PT 255
Query: 258 VKAFIE 263
V+ ++E
Sbjct: 256 VRNYVE 261
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 113 NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 170
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 171 NLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 227 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 253
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 114 NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 171
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 172 NLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 228 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 254
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 113 NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 170
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 171 NLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 227 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 253
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 113 NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 170
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 171 NLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 227 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 253
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 113 NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 170
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 171 NLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 227 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 253
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 113 NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 170
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 171 NLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 227 LIYEMAAGYPPFF-ADEPIQIYEKIVSG 253
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 107/222 (48%), Gaps = 26/222 (11%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVC- 90
LG+G+ +V +E G +HF+ + ++ Q+ TL K I+
Sbjct: 49 LGTGSFGRVMLVKHKETG----------NHFAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 91 ---YSVWLD---DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLH 144
+ V L+ ++ L + E G + ++ ++ S + ++ Q++ EYLH
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 145 THEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYE 202
+ + +I+RDL N+ I+ G +++ D GFA V GR+ + GTPEY+APE +
Sbjct: 159 SLD--LIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILS 212
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ Y + VD ++ G+ + EM P+ D +IY+K+ G
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSG 253
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 107/222 (48%), Gaps = 26/222 (11%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVC- 90
LG+G+ +V +E G +HF+ + ++ Q+ TL K I+
Sbjct: 49 LGTGSFGRVMLVKHKETG----------NHFAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 91 ---YSVWLD---DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLH 144
+ V L+ ++ L + E G + ++ ++ S + ++ Q++ EYLH
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 145 THEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYE 202
+ + +I+RDL N+ I+ G +++ D GFA V GR+ + GTPEY+APE +
Sbjct: 159 SLD--LIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILS 212
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ Y + VD ++ G+ + EM P+ D +IY+K+ G
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSG 253
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 24/219 (10%)
Query: 31 LLGSGAVKKVYRAFDQEEG----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
+LGSGA VY+ EG I VA ++R + P + E ++ ++ N +
Sbjct: 56 VLGSGAFGTVYKGLWIPEGEKVKIPVAIMELR---EATSPKANKEILDEAYVMASVDNPH 112
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHT 145
+ + L +T+ IT++ G L Y ++H+ ++ + L W Q+ +G+ YL
Sbjct: 113 VCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 169
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---EYMAPE-LY 201
++HRDL N+ + VKI D G A ++G + G ++MA E +
Sbjct: 170 RR--LVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 226
Query: 202 EEDYTEMVDIYSFGLCLLEMVTM------EIPYSECDSV 234
YT D++S+G+ + E++T IP SE S+
Sbjct: 227 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 265
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 107/222 (48%), Gaps = 26/222 (11%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVC- 90
LG+G+ +V +E G +HF+ + ++ Q+ TL K I+
Sbjct: 49 LGTGSFGRVMLVKHKETG----------NHFAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 91 ---YSVWLD---DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLH 144
+ V L+ ++ L + E G + ++ ++ S + ++ Q++ EYLH
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 145 THEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYE 202
+ + +I+RDL N+ I+ G +++ D GFA V GR+ + GTPEY+APE +
Sbjct: 159 SLD--LIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILS 212
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ Y + VD ++ G+ + EM P+ D +IY+K+ G
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSG 253
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 100 NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 157
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 158 NLLIDEQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 213
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 214 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 240
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 117/246 (47%), Gaps = 18/246 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V A+D VA +LS ++ R + E+ L++ + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
K II +V+ ++ + + E+ + + + + H + L Q+L G+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYL---LYQMLXGI 139
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE- 199
++LH+ IIHRDL SNI + + +KI D G A G S + T Y APE
Sbjct: 140 KHLHS--AGIIHRDLKPSNIVVKSD-XTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 200 LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV--TGGVKPQALNKVKDPE 257
+ Y E VDI+S G + EMV +I + D + + K + G P+ + K++ P
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PT 255
Query: 258 VKAFIE 263
V+ ++E
Sbjct: 256 VRNYVE 261
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 113 NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 170
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 171 NLIIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPEIIISKGYNKAVDWWALGV 226
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 227 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 253
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 129/298 (43%), Gaps = 48/298 (16%)
Query: 20 DPSGRFGR----YSDLLGSGAVKKVYRA----FDQE---EGIEVAWNQVRLSHFSEDPVL 68
DP F R LG GA +V A D++ E + VA ++ ED
Sbjct: 27 DPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEED--- 83
Query: 69 VNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR----- 122
++ L SE+++++ + K+K II D L I E + GNLR Y + R
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQD--GPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 123 -----------HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKI 171
++ K L + Q+ G+EYL + + IHRDL N+ + N +KI
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTEN-NVMKI 198
Query: 172 GDLGFAAIVGR-SHAAHSIIGT--PEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTM--- 224
D G A + + + G ++MAPE L++ YT D++SFG+ + E+ T+
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 225 EIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCI-AQPRARPSASELLKD 281
P + + K+ K+ KP E+ + C A P RP+ +L++D
Sbjct: 259 PYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 117/246 (47%), Gaps = 18/246 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V A+D VA +LS ++ R + E+ L++ + +
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
K II +V+ ++ + + E+ + + + + H + L Q+L G+
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYL---LYQMLXGI 132
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE- 199
++LH+ IIHRDL SNI + + +KI D G A G S + T Y APE
Sbjct: 133 KHLHS--AGIIHRDLKPSNIVVKSD-XTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 189
Query: 200 LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV--TGGVKPQALNKVKDPE 257
+ Y E VDI+S G + EMV +I + D + + K + G P+ + K++ P
Sbjct: 190 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PT 248
Query: 258 VKAFIE 263
V+ ++E
Sbjct: 249 VRNYVE 254
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 113 NSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 170
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 171 NLMIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 227 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 253
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 113 NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 170
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 171 NLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 227 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 253
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 114 NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 171
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 172 NLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 228 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 254
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 106 NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 163
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 164 NLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 219
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 220 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 246
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 114 NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 171
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 172 NLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 228 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 254
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 114 NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 171
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 172 NLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 228 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 254
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 113 NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 170
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 171 NLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 227 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 253
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 24/219 (10%)
Query: 31 LLGSGAVKKVYRAFDQEEG----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
+LGSGA VY+ EG I VA ++R + P + E ++ ++ N +
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNPH 78
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHT 145
+ + L +T+ IT++ G L Y ++H+ ++ + L W Q+ +G+ YL
Sbjct: 79 VCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---EYMAPE-LY 201
++HRDL N+ + VKI D G A ++G + G ++MA E +
Sbjct: 136 RR--LVHRDLAARNVLVK-TPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 202 EEDYTEMVDIYSFGLCLLEMVTM------EIPYSECDSV 234
YT D++S+G+ + E++T IP SE S+
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 231
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 113 NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 170
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 171 NLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 227 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 253
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 127/268 (47%), Gaps = 27/268 (10%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQV--RLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIV 89
LGSG V + ++ G++ A + R + S V + EV +L+ +++ +I
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPC 149
+ V+ + + I E+ G L + + ++ + ++ KQ+L G+ YLH+ +
Sbjct: 79 LHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ-- 134
Query: 150 IIHRDLNCSNI-FINGNIGQ--VKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
I H DL NI ++ N+ + +KI D G A + + +I GTPE++APE+ YE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 194
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKI----------YKKVTGGVKPQALN 251
E D++S G+ +++ P+ ++ +++A + Y T + +
Sbjct: 195 GLE-ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIR 253
Query: 252 K--VKDPEVKAFIEKCIAQPRARPSASE 277
+ VKDP+ + I+ + P +P ++
Sbjct: 254 RLLVKDPKKRMTIQDSLQHPWIKPKDTQ 281
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 114 NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 171
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 172 NLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 228 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 254
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 134 NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 191
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 192 NLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 247
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 248 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 274
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 24/219 (10%)
Query: 31 LLGSGAVKKVYRAFDQEEG----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
+LGSGA VY+ EG I VA ++R + P + E ++ ++ N +
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNPH 85
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHT 145
+ + L +T+ IT++ G L Y ++H+ ++ + L W Q+ +G+ YL
Sbjct: 86 VCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---EYMAPE-LY 201
++HRDL N+ + VKI D G A ++G + G ++MA E +
Sbjct: 143 RR--LVHRDLAARNVLVK-TPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 202 EEDYTEMVDIYSFGLCLLEMVTM------EIPYSECDSV 234
YT D++S+G+ + E++T IP SE S+
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 238
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 24/219 (10%)
Query: 31 LLGSGAVKKVYRAFDQEEG----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
+LGSGA VY+ EG I VA ++R + P + E ++ ++ N +
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNPH 79
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHT 145
+ + L +T+ I ++ G L Y ++H+ ++ + L W Q+ +G+ YL
Sbjct: 80 VCRLLGICLT---STVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 136
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---EYMAPE-LY 201
++HRDL N+ + VKI D G A ++G + G ++MA E +
Sbjct: 137 RR--LVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 202 EEDYTEMVDIYSFGLCLLEMVTM------EIPYSECDSV 234
YT D++S+G+ + E++T IP SE S+
Sbjct: 194 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 232
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 116/244 (47%), Gaps = 21/244 (8%)
Query: 22 SGRFGRYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLL 79
G +Y L +G G VY+A D + I VA ++RL +ED + + E+ LL
Sbjct: 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRI-VALKRIRLD--AEDEGIPSTAIREISLL 73
Query: 80 RTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEG 139
+ L + I+ V ++ TL F E + + + +K + Q+L G
Sbjct: 74 KELHHPNIVSLIDVIHSERCLTLVF--EFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRG 131
Query: 140 LEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYM 196
+ + H H I+HRDL N+ IN + G +K+ D G A G RS+ H ++ T Y
Sbjct: 132 VAHCHQHR--ILHRDLKPQNLLINSD-GALKLADFGLARAFGIPVRSY-THEVV-TLWYR 186
Query: 197 APELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQALN 251
AP++ + Y+ VDI+S G EM+T + + ++ D + KI+ + G P+
Sbjct: 187 APDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIF-SILGTPNPREWP 245
Query: 252 KVKD 255
+V++
Sbjct: 246 QVQE 249
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V A+D VA +LS ++ R + E+ L++ + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
K II +V+ ++ + + E+ + + + + H + L Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL---LYQMLVGI 139
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE- 199
++LH+ IIHRDL SNI + + +KI D G A G S + T Y APE
Sbjct: 140 KHLHS--AGIIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 200 LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV--TGGVKPQALNKVKDPE 257
+ Y E VDI+S G + EM+ + + D + + K + G P+ + K++ P
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ-PT 255
Query: 258 VKAFIE 263
V+ ++E
Sbjct: 256 VRTYVE 261
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 127/268 (47%), Gaps = 27/268 (10%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQV--RLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIV 89
LGSG V + ++ G++ A + R + S V + EV +L+ +++ +I
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPC 149
+ V+ + + I E+ G L + + ++ + ++ KQ+L G+ YLH+ +
Sbjct: 78 LHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ-- 133
Query: 150 IIHRDLNCSNI-FINGNIGQ--VKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
I H DL NI ++ N+ + +KI D G A + + +I GTPE++APE+ YE
Sbjct: 134 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 193
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKI----------YKKVTGGVKPQALN 251
E D++S G+ +++ P+ ++ +++A + Y T + +
Sbjct: 194 GLE-ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIR 252
Query: 252 K--VKDPEVKAFIEKCIAQPRARPSASE 277
+ VKDP+ + I+ + P +P ++
Sbjct: 253 RLLVKDPKKRMTIQDSLQHPWIKPKDTQ 280
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 127/268 (47%), Gaps = 27/268 (10%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQV--RLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIV 89
LGSG V + ++ G++ A + R + S V + EV +L+ +++ +I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPC 149
+ V+ + + I E+ G L + + ++ + ++ KQ+L G+ YLH+ +
Sbjct: 79 LHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ-- 134
Query: 150 IIHRDLNCSNI-FINGNIGQ--VKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
I H DL NI ++ N+ + +KI D G A + + +I GTPE++APE+ YE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 194
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKI----------YKKVTGGVKPQALN 251
E D++S G+ +++ P+ ++ +++A + Y T + +
Sbjct: 195 GLE-ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIR 253
Query: 252 K--VKDPEVKAFIEKCIAQPRARPSASE 277
+ VKDP+ + I+ + P +P ++
Sbjct: 254 RLLVKDPKKRMTIQDSLQHPWIKPKDTQ 281
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 20/196 (10%)
Query: 102 LNFITEVCTSGNLRTYRKKHRH------------VSIKALKKWSKQVLEGLEYLHTHEPC 149
L I E C GNL TY + R+ ++++ L +S QV +G+E+L + +
Sbjct: 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRK-- 164
Query: 150 IIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS--HAAHSIIGTP-EYMAPE-LYEEDY 205
IHRDL NI ++ VKI D G A + + + P ++MAPE +++ Y
Sbjct: 165 XIHRDLAARNILLSEK-NVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 223
Query: 206 TEMVDIYSFGLCLLEMVTMEI-PYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK 264
T D++SFG+ L E+ ++ PY + +++ G + +A + + ++
Sbjct: 224 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRMRAPDYTTPEMYQTMLDC 283
Query: 265 CIAQPRARPSASELLK 280
+P RP+ SEL++
Sbjct: 284 WHGEPSQRPTFSELVE 299
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ + ++ Q++ EYLH+ + +I+RDL
Sbjct: 114 NSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 171
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +K+ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 172 NLMIDQQ-GYIKVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 228 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 254
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ + ++ Q++ EYLH+ + +I+RDL
Sbjct: 113 NSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 170
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +K+ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 171 NLMIDQQ-GYIKVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 227 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 253
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ + + ++ Q++ EYLH+ + +I+RDL
Sbjct: 113 NSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 170
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 171 NLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 227 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 253
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 113 NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 170
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 171 NLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ +M P+ D +IY+K+ G
Sbjct: 227 LIYQMAAGYPPFF-ADQPIQIYEKIVSG 253
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 24/219 (10%)
Query: 31 LLGSGAVKKVYRAFDQEEG----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
+LGSGA VY+ EG I VA ++R + P + E ++ ++ N +
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNPH 82
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHT 145
+ + L +T+ I ++ G L Y ++H+ ++ + L W Q+ +G+ YL
Sbjct: 83 VCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 139
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---EYMAPE-LY 201
++HRDL N+ + VKI D G A ++G + G ++MA E +
Sbjct: 140 RR--LVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 202 EEDYTEMVDIYSFGLCLLEMVTM------EIPYSECDSV 234
YT D++S+G+ + E++T IP SE S+
Sbjct: 197 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 235
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 127/268 (47%), Gaps = 27/268 (10%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQV--RLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIV 89
LGSG V + ++ G++ A + R + S V + EV +L+ +++ +I
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPC 149
+ V+ + + I E+ G L + + ++ + ++ KQ+L G+ YLH+ +
Sbjct: 78 LHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ-- 133
Query: 150 IIHRDLNCSNI-FINGNIGQ--VKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
I H DL NI ++ N+ + +KI D G A + + +I GTPE++APE+ YE
Sbjct: 134 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 193
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKI----------YKKVTGGVKPQALN 251
E D++S G+ +++ P+ ++ +++A + Y T + +
Sbjct: 194 GLE-ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIR 252
Query: 252 K--VKDPEVKAFIEKCIAQPRARPSASE 277
+ VKDP+ + I+ + P +P ++
Sbjct: 253 RLLVKDPKKRMTIQDSLQHPWIKPKDTQ 280
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 34/222 (15%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVC 90
L+G G+ VY A+D+ VA +V + ED + R+ E+ +L LK+ YII
Sbjct: 33 LIGRGSYGYVYLAYDKNTEKNVAIKKV--NRMFEDLIDCKRILREITILNRLKSDYIIRL 90
Query: 91 YSVWLDD---QHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHE 147
Y + + D + + L + E+ S +L+ K ++ + +K +L G ++H E
Sbjct: 91 YDLIIPDDLLKFDELYIVLEIADS-DLKKLFKTPIFLTEEHIKTILYNLLLGENFIH--E 147
Query: 148 PCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI------------------ 189
IIHRDL +N +N + VK+ D G A + + +
Sbjct: 148 SGIIHRDLKPANCLLNQDCS-VKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKK 206
Query: 190 -----IGTPEYMAPEL--YEEDYTEMVDIYSFGLCLLEMVTM 224
+ T Y APEL +E+YT+ +DI+S G E++ M
Sbjct: 207 QLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNM 248
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 116/244 (47%), Gaps = 21/244 (8%)
Query: 22 SGRFGRYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLL 79
G +Y L +G G VY+A D + I VA ++RL +ED + + E+ LL
Sbjct: 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRI-VALKRIRLD--AEDEGIPSTAIREISLL 73
Query: 80 RTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEG 139
+ L + I+ V ++ TL F E + + + +K + Q+L G
Sbjct: 74 KELHHPNIVSLIDVIHSERCLTLVF--EFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRG 131
Query: 140 LEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYM 196
+ + H H I+HRDL N+ IN + G +K+ D G A G RS+ H ++ T Y
Sbjct: 132 VAHCHQHR--ILHRDLKPQNLLINSD-GALKLADFGLARAFGIPVRSY-THEVV-TLWYR 186
Query: 197 APELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQALN 251
AP++ + Y+ VDI+S G EM+T + + ++ D + KI+ + G P+
Sbjct: 187 APDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIF-SILGTPNPREWP 245
Query: 252 KVKD 255
+V++
Sbjct: 246 QVQE 249
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 127/268 (47%), Gaps = 27/268 (10%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQV--RLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIV 89
LGSG V + ++ G++ A + R + S V + EV +L+ +++ +I
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPC 149
+ V+ + + I E+ G L + + ++ + ++ KQ+L G+ YLH+ +
Sbjct: 79 LHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ-- 134
Query: 150 IIHRDLNCSNI-FINGNIGQ--VKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
I H DL NI ++ N+ + +KI D G A + + +I GTPE++APE+ YE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 194
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKI----------YKKVTGGVKPQALN 251
E D++S G+ +++ P+ ++ +++A + Y T + +
Sbjct: 195 GLE-ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIR 253
Query: 252 K--VKDPEVKAFIEKCIAQPRARPSASE 277
+ VKDP+ + I+ + P +P ++
Sbjct: 254 RLLVKDPKKRMTIQDSLQHPWIKPKDTQ 281
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 129/298 (43%), Gaps = 48/298 (16%)
Query: 20 DPSGRFGR----YSDLLGSGAVKKVYRA----FDQE---EGIEVAWNQVRLSHFSEDPVL 68
DP F R LG GA +V A D++ E + VA ++ +D
Sbjct: 27 DPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--- 83
Query: 69 VNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR----- 122
++ L SE+++++ + K+K II D L I E + GNLR Y + R
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIITLLGACTQD--GPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 123 -----------HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKI 171
++ K L + Q+ G+EYL + + IHRDL N+ + N +KI
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTEN-NVMKI 198
Query: 172 GDLGFAAIVGR-SHAAHSIIGT--PEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTM--- 224
D G A + + + G ++MAPE L++ YT D++SFG+ + E+ T+
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 225 EIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCI-AQPRARPSASELLKD 281
P + + K+ K+ KP E+ + C A P RP+ +L++D
Sbjct: 259 PYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 127/268 (47%), Gaps = 27/268 (10%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQV--RLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIV 89
LGSG V + ++ G++ A + R + S V + EV +L+ +++ +I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPC 149
+ V+ + + I E+ G L + + ++ + ++ KQ+L G+ YLH+ +
Sbjct: 79 LHEVY--ENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ-- 134
Query: 150 IIHRDLNCSNI-FINGNIGQ--VKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
I H DL NI ++ N+ + +KI D G A + + +I GTPE++APE+ YE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 194
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKI----------YKKVTGGVKPQALN 251
E D++S G+ +++ P+ ++ +++A + Y T + +
Sbjct: 195 GLE-ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIR 253
Query: 252 K--VKDPEVKAFIEKCIAQPRARPSASE 277
+ VKDP+ + I+ + P +P ++
Sbjct: 254 RLLVKDPKKRMTIQDSLQHPWIKPKDTQ 281
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 127/268 (47%), Gaps = 27/268 (10%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQV--RLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIV 89
LGSG V + ++ G++ A + R + S V + EV +L+ +++ +I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPC 149
+ V+ + + I E+ G L + + ++ + ++ KQ+L G+ YLH+ +
Sbjct: 79 LHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ-- 134
Query: 150 IIHRDLNCSNI-FINGNIGQ--VKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
I H DL NI ++ N+ + +KI D G A + + +I GTPE++APE+ YE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 194
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKI----------YKKVTGGVKPQALN 251
E D++S G+ +++ P+ ++ +++A + Y T + +
Sbjct: 195 GLE-ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIR 253
Query: 252 K--VKDPEVKAFIEKCIAQPRARPSASE 277
+ VKDP+ + I+ + P +P ++
Sbjct: 254 RLLVKDPKKRMTIQDSLQHPWIKPKDTQ 281
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 126/298 (42%), Gaps = 48/298 (16%)
Query: 20 DPSGRFGR----YSDLLGSGAVKKVYRA----FDQE---EGIEVAWNQVRLSHFSEDPVL 68
DP F R LG GA +V A D++ E + VA ++ +D
Sbjct: 27 DPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--- 83
Query: 69 VNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR----- 122
++ L SE+++++ + K+K II D L I E + GNLR Y + R
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQD--GPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 123 -----------HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKI 171
++ K L + Q+ G+EYL + + IHRDL N+ + N +KI
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTEN-NVMKI 198
Query: 172 GDLGFAAIVGRSHAAHSIIGTP---EYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTM--- 224
D G A + ++MAPE L++ YT D++SFG+ + E+ T+
Sbjct: 199 ADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 225 EIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCI-AQPRARPSASELLKD 281
P + + K+ K+ KP E+ + C A P RP+ +L++D
Sbjct: 259 PYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 117/265 (44%), Gaps = 22/265 (8%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV---RLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
LLGSG VY + + VA V R+S + E P R+ EV LL+ + + +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVVLLKKVSSGFS 73
Query: 88 IVCYSV-WLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
V + W + + + + + +L + + + + + + QVLE + H H
Sbjct: 74 GVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVR--HCH 131
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
++HRD+ NI I+ N G++K+ D G A++ + GT Y PE Y
Sbjct: 132 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTRVYSPPEWIRYHRY 190
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIE 263
+ ++S G+ L +MV +IP+ + + ++ Q + + E + I
Sbjct: 191 HGRSAAVWSLGILLYDMVCGDIPFEHDEEI----------IRGQVFFRQRVSSECQHLIR 240
Query: 264 KCIA-QPRARPSASELLKDPFFSEL 287
C+A +P RP+ E+ P+ ++
Sbjct: 241 WCLALRPSDRPTFEEIQNHPWMQDV 265
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 126/298 (42%), Gaps = 48/298 (16%)
Query: 20 DPSGRFGR----YSDLLGSGAVKKVYRA----FDQE---EGIEVAWNQVRLSHFSEDPVL 68
DP F R LG GA +V A D++ E + VA ++ +D
Sbjct: 27 DPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--- 83
Query: 69 VNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR----- 122
++ L SE+++++ + K+K II D L I E + GNLR Y + R
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQD--GPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 123 -----------HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKI 171
++ K L + Q+ G+EYL + + IHRDL N+ + N +KI
Sbjct: 142 XSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTEN-NVMKI 198
Query: 172 GDLGFAAIVGRSHAAHSIIGTP---EYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTM--- 224
D G A + ++MAPE L++ YT D++SFG+ + E+ T+
Sbjct: 199 ADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 225 EIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCI-AQPRARPSASELLKD 281
P + + K+ K+ KP E+ + C A P RP+ +L++D
Sbjct: 259 PYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 24/219 (10%)
Query: 31 LLGSGAVKKVYRAFDQEEG----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
+LGSGA VY+ EG I VA ++R + P + E ++ ++ N +
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNPH 81
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHT 145
+ + L +T+ I ++ G L Y ++H+ ++ + L W Q+ +G+ YL
Sbjct: 82 VCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---EYMAPE-LY 201
++HRDL N+ + VKI D G A ++G + G ++MA E +
Sbjct: 139 RR--LVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 202 EEDYTEMVDIYSFGLCLLEMVTM------EIPYSECDSV 234
YT D++S+G+ + E++T IP SE S+
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 234
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 109/235 (46%), Gaps = 30/235 (12%)
Query: 75 EVQLLR--TLKNKYIIVCYS-----VWLDDQHNTLNF---ITEVCTSGNLRTYRKKHRHV 124
EVQ LR TLK I+ S + L D + T F + ++ G L Y + +
Sbjct: 62 EVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTL 121
Query: 125 SIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH 184
S K +K + +LE + LH I+HRDL NI ++ ++ +K+ D GF+ +
Sbjct: 122 SEKETRKIMRALLEVICALHKLN--IVHRDLKPENILLDDDM-NIKLTDFGFSCQLDPGE 178
Query: 185 AAHSIIGTPEYMAPELYE-------EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKI 237
+ GTP Y+APE+ E Y + VD++S G+ + ++ P+ + +
Sbjct: 179 KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML 238
Query: 238 YKKVTGGVK---PQ---ALNKVKDPEVKAFIEKCIAQPRARPSASELLKDPFFSE 286
++G + P+ + VKD V F+ + QP+ R +A E L PFF +
Sbjct: 239 RMIMSGNYQFGSPEWDDYSDTVKDL-VSRFL---VVQPQKRYTAEEALAHPFFQQ 289
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 127/268 (47%), Gaps = 27/268 (10%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQV--RLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIV 89
LGSG V + ++ G++ A + R + S V + EV +L+ +++ +I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPC 149
+ V+ + + I E+ G L + + ++ + ++ KQ+L G+ YLH+ +
Sbjct: 79 LHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ-- 134
Query: 150 IIHRDLNCSNI-FINGNIGQ--VKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
I H DL NI ++ N+ + +KI D G A + + +I GTPE++APE+ YE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 194
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKI----------YKKVTGGVKPQALN 251
E D++S G+ +++ P+ ++ +++A + Y T + +
Sbjct: 195 GLE-ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIR 253
Query: 252 K--VKDPEVKAFIEKCIAQPRARPSASE 277
+ VKDP+ + I+ + P +P ++
Sbjct: 254 RLLVKDPKKRMTIQDSLQHPWIKPKDTQ 281
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 24/219 (10%)
Query: 31 LLGSGAVKKVYRAFDQEEG----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
+LGSGA VY+ EG I VA ++R + P + E ++ ++ N +
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNPH 78
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHT 145
+ + L +T+ I ++ G L Y ++H+ ++ + L W Q+ +G+ YL
Sbjct: 79 VCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---EYMAPE-LY 201
++HRDL N+ + VKI D G A ++G + G ++MA E +
Sbjct: 136 RR--LVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 202 EEDYTEMVDIYSFGLCLLEMVTM------EIPYSECDSV 234
YT D++S+G+ + E++T IP SE S+
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 231
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 125/264 (47%), Gaps = 27/264 (10%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQV--RLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIV 89
LGSG V + ++ G++ A + R + S V + EV +L+ +++ +I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPC 149
+ V+ + + I E+ G L + + ++ + ++ KQ+L G+ YLH+ +
Sbjct: 79 LHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ-- 134
Query: 150 IIHRDLNCSNI-FINGNIGQ--VKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
I H DL NI ++ N+ + +KI D G A + + +I GTPE++APE+ YE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 194
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKI----------YKKVTGGVKPQALN 251
E D++S G+ +++ P+ ++ +++A + Y T + +
Sbjct: 195 GLE-ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIR 253
Query: 252 K--VKDPEVKAFIEKCIAQPRARP 273
+ VKDP+ + I+ + P +P
Sbjct: 254 RLLVKDPKKRMTIQDSLQHPWIKP 277
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 24/219 (10%)
Query: 31 LLGSGAVKKVYRAFDQEEG----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
+LGSGA VY+ EG I VA ++R + P + E ++ ++ N +
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNPH 80
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHT 145
+ + L +T+ I ++ G L Y ++H+ ++ + L W Q+ +G+ YL
Sbjct: 81 VCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---EYMAPE-LY 201
++HRDL N+ + VKI D G A ++G + G ++MA E +
Sbjct: 138 RR--LVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 202 EEDYTEMVDIYSFGLCLLEMVTM------EIPYSECDSV 234
YT D++S+G+ + E++T IP SE S+
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 233
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 127/268 (47%), Gaps = 27/268 (10%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQV--RLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIV 89
LGSG V + ++ G++ A + R + S V + EV +L+ +++ +I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPC 149
+ V+ + + I E+ G L + + ++ + ++ KQ+L G+ YLH+ +
Sbjct: 79 LHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ-- 134
Query: 150 IIHRDLNCSNI-FINGNIGQ--VKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
I H DL NI ++ N+ + +KI D G A + + +I GTPE++APE+ YE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 194
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKI----------YKKVTGGVKPQALN 251
E D++S G+ +++ P+ ++ +++A + Y T + +
Sbjct: 195 GLE-ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIR 253
Query: 252 K--VKDPEVKAFIEKCIAQPRARPSASE 277
+ VKDP+ + I+ + P +P ++
Sbjct: 254 RLLVKDPKKRMTIQDSLQHPWIKPKDTQ 281
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 117/246 (47%), Gaps = 18/246 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V A+D VA +LS ++ R + E+ L++ + +
Sbjct: 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
K II +V+ ++ + + E+ + + + + H + L Q+L G+
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 177
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE- 199
++LH+ IIHRDL SNI + + +KI D G A G S + T Y APE
Sbjct: 178 KHLHS--AGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 234
Query: 200 LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV--TGGVKPQALNKVKDPE 257
+ Y E VDI+S G + EMV +I + D + + K + G P+ + K++ P
Sbjct: 235 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PT 293
Query: 258 VKAFIE 263
V+ ++E
Sbjct: 294 VRNYVE 299
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 109/235 (46%), Gaps = 30/235 (12%)
Query: 75 EVQLLR--TLKNKYIIVCYS-----VWLDDQHNTLNF---ITEVCTSGNLRTYRKKHRHV 124
EVQ LR TLK I+ S + L D + T F + ++ G L Y + +
Sbjct: 49 EVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTL 108
Query: 125 SIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH 184
S K +K + +LE + LH I+HRDL NI ++ ++ +K+ D GF+ +
Sbjct: 109 SEKETRKIMRALLEVICALHKLN--IVHRDLKPENILLDDDM-NIKLTDFGFSCQLDPGE 165
Query: 185 AAHSIIGTPEYMAPELYE-------EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKI 237
+ GTP Y+APE+ E Y + VD++S G+ + ++ P+ + +
Sbjct: 166 KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML 225
Query: 238 YKKVTGGVK---PQ---ALNKVKDPEVKAFIEKCIAQPRARPSASELLKDPFFSE 286
++G + P+ + VKD V F+ + QP+ R +A E L PFF +
Sbjct: 226 RMIMSGNYQFGSPEWDDYSDTVKDL-VSRFL---VVQPQKRYTAEEALAHPFFQQ 276
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 24/219 (10%)
Query: 31 LLGSGAVKKVYRAFDQEEG----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
+LGSGA VY+ EG I VA ++R + P + E ++ ++ N +
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNPH 79
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHT 145
+ + L +T+ I ++ G L Y ++H+ ++ + L W Q+ +G+ YL
Sbjct: 80 VCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 136
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---EYMAPE-LY 201
++HRDL N+ + VKI D G A ++G + G ++MA E +
Sbjct: 137 RR--LVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 202 EEDYTEMVDIYSFGLCLLEMVTM------EIPYSECDSV 234
YT D++S+G+ + E++T IP SE S+
Sbjct: 194 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 232
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 130/298 (43%), Gaps = 48/298 (16%)
Query: 20 DPSGRFGR----YSDLLGSGAVKKVYRA----FDQE---EGIEVAWNQVRLSHFSEDPVL 68
DP F R LG GA +V A D++ E + VA ++ +D
Sbjct: 27 DPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--- 83
Query: 69 VNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR----- 122
++ L SE+++++ + K+K II D L I E + GNLR Y + R
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQD--GPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 123 -----------HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKI 171
++ K L + Q+ G+EYL + + IHRDL N+ + N +KI
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTEN-NVMKI 198
Query: 172 GDLGFAAIVGR-SHAAHSIIGT--PEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTM--- 224
D G A + + ++ G ++MAPE L++ YT D++SFG+ + E+ T+
Sbjct: 199 ADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 225 EIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCI-AQPRARPSASELLKD 281
P + + K+ K+ KP E+ + C A P RP+ +L++D
Sbjct: 259 PYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 26/216 (12%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY DL LG G V+ A D + VA ++ L+ DP V E++++R L +
Sbjct: 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT----DPQSVKHALREIKIIRRLDH 67
Query: 85 KYIIVCYSVW------LDDQHNTLN-----FITEVCTSGNLRTYRKKHRHVSIKALKKWS 133
I+ + + L D +L +I + +L ++ + A + +
Sbjct: 68 DNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHA-RLFM 126
Query: 134 KQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG--RSHAAHSIIG 191
Q+L GL+Y+H+ ++HRDL +N+FIN +KIGD G A I+ SH H G
Sbjct: 127 YQLLRGLKYIHSAN--VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEG 184
Query: 192 --TPEYMAPELY--EEDYTEMVDIYSFGLCLLEMVT 223
T Y +P L +YT+ +D+++ G EM+T
Sbjct: 185 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLT 220
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 125/264 (47%), Gaps = 27/264 (10%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQV--RLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIV 89
LGSG V + ++ G++ A + R + S V + EV +L+ +++ +I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPC 149
+ V+ + + I E+ G L + + ++ + ++ KQ+L G+ YLH+ +
Sbjct: 79 LHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ-- 134
Query: 150 IIHRDLNCSNI-FINGNIGQ--VKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
I H DL NI ++ N+ + +KI D G A + + +I GTPE++APE+ YE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 194
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKI----------YKKVTGGVKPQALN 251
E D++S G+ +++ P+ ++ +++A + Y T + +
Sbjct: 195 GLE-ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIR 253
Query: 252 K--VKDPEVKAFIEKCIAQPRARP 273
+ VKDP+ + I+ + P +P
Sbjct: 254 RLLVKDPKKRMTIQDSLQHPWIKP 277
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 109/254 (42%), Gaps = 11/254 (4%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVC 90
+LG G+ +V D+ G E A + + L EVQLL+ L + I+
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ-KTDKESLLREVQLLKQLDHPNIMKL 91
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCI 150
Y + D + L + EV T G L + S + +QVL G+ Y+H ++ I
Sbjct: 92 YEFFEDKGYFYL--VGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK--I 147
Query: 151 IHRDLNCSNIFINGNI--GQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEEDYTEM 208
+HRDL N+ + ++I D G + S IGT Y+APE+ Y E
Sbjct: 148 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEK 207
Query: 209 VDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK--DPEVKAFIEKCI 266
D++S G+ L +++ P++ + I KKV G L + K K I K +
Sbjct: 208 CDVWSTGVILYILLSGCPPFNGANEY-DILKKVEKGKYTFELPQWKKVSESAKDLIRKML 266
Query: 267 AQ-PRARPSASELL 279
P R SA + L
Sbjct: 267 TYVPSMRISARDAL 280
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 127/268 (47%), Gaps = 27/268 (10%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQV--RLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIV 89
LGSG V + ++ G++ A + R + S V + EV +L+ +++ +I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPC 149
+ V+ + + I E+ G L + + ++ + ++ KQ+L G+ YLH+ +
Sbjct: 79 LHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ-- 134
Query: 150 IIHRDLNCSNI-FINGNIGQ--VKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
I H DL NI ++ N+ + +KI D G A + + +I GTPE++APE+ YE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 194
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKI----------YKKVTGGVKPQALN 251
E D++S G+ +++ P+ ++ +++A + Y T + +
Sbjct: 195 GLE-ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIR 253
Query: 252 K--VKDPEVKAFIEKCIAQPRARPSASE 277
+ VKDP+ + I+ + P +P ++
Sbjct: 254 RLLVKDPKKRMTIQDSLQHPWIKPKDTQ 281
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 127/268 (47%), Gaps = 27/268 (10%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQV--RLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIV 89
LGSG V + ++ G++ A + R + S V + EV +L+ +++ +I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPC 149
+ V+ + + I E+ G L + + ++ + ++ KQ+L G+ YLH+ +
Sbjct: 79 LHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ-- 134
Query: 150 IIHRDLNCSNI-FINGNIGQ--VKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
I H DL NI ++ N+ + +KI D G A + + +I GTPE++APE+ YE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 194
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKI----------YKKVTGGVKPQALN 251
E D++S G+ +++ P+ ++ +++A + Y T + +
Sbjct: 195 GLE-ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIR 253
Query: 252 K--VKDPEVKAFIEKCIAQPRARPSASE 277
+ VKDP+ + I+ + P +P ++
Sbjct: 254 RLLVKDPKKRMTIQDSLQHPWIKPKDTQ 281
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 109/254 (42%), Gaps = 11/254 (4%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVC 90
+LG G+ +V D+ G E A + + L EVQLL+ L + I+
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ-KTDKESLLREVQLLKQLDHPNIMKL 114
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCI 150
Y + D + L + EV T G L + S + +QVL G+ Y+H ++ I
Sbjct: 115 YEFFEDKGYFYL--VGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK--I 170
Query: 151 IHRDLNCSNIFINGNI--GQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEEDYTEM 208
+HRDL N+ + ++I D G + S IGT Y+APE+ Y E
Sbjct: 171 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEK 230
Query: 209 VDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK--DPEVKAFIEKCI 266
D++S G+ L +++ P++ + I KKV G L + K K I K +
Sbjct: 231 CDVWSTGVILYILLSGCPPFNGANEY-DILKKVEKGKYTFELPQWKKVSESAKDLIRKML 289
Query: 267 AQ-PRARPSASELL 279
P R SA + L
Sbjct: 290 TYVPSMRISARDAL 303
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 104/219 (47%), Gaps = 11/219 (5%)
Query: 27 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
++ +LG G+ V A + E A + H ++ V + E ++ L + +
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK-VPYVTRERDVMSRLDHPF 93
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
+ Y + DD+ L F +G L Y +K + ++ +++ LEYLH
Sbjct: 94 FVKLYFTFQDDEK--LYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELY-E 202
IIHRDL NI +N ++ ++I D G A ++ + A+S +GT +Y++PEL E
Sbjct: 152 --GIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 208
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV 241
+ ++ D+++ G C++ + +P + I++K+
Sbjct: 209 KSASKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKI 246
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 30/271 (11%)
Query: 28 YSD--LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNK 85
Y+D ++G+G+ VY+A + G VA +V +D NR E+Q++R L +
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNR---ELQIMRKLDHC 73
Query: 86 YII----VCYSVWLDDQHNTLNFITEVCTSGNLRT---YRKKHRHVSIKALKKWSKQVLE 138
I+ YS LN + + R Y + + + + +K + Q+
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAP 198
L Y+H+ C HRD+ N+ ++ + +K+ D G A + R S I + Y AP
Sbjct: 134 SLAYIHSFGIC--HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 191
Query: 199 ELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQA---- 249
EL DYT +D++S G L E++ + + S D + +I K + + Q
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 251
Query: 250 --LNKVKDPEVKAFIEKCIAQPRARPSASEL 278
+ K P++KA + +PR P A L
Sbjct: 252 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIAL 282
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 103/219 (47%), Gaps = 11/219 (5%)
Query: 27 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
++ +LG G+ V A + E A + H ++ V + E ++ L + +
Sbjct: 36 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK-VPYVTRERDVMSRLDHPF 94
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
+ Y + DD+ L F +G L Y +K + ++ +++ LEYLH
Sbjct: 95 FVKLYFTFQDDEK--LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELY-E 202
IIHRDL NI +N ++ ++I D G A ++ + A+S +GT +Y++PEL E
Sbjct: 153 --GIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 209
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV 241
+ + D+++ G C++ + +P + I++K+
Sbjct: 210 KSACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKI 247
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 117/246 (47%), Gaps = 18/246 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V A+D VA +LS ++ R + E+ L++ + +
Sbjct: 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
K II +V+ ++ + + E+ + + + + H + L Q+L G+
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 177
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE- 199
++LH+ IIHRDL SNI + + +KI D G A G S + T Y APE
Sbjct: 178 KHLHS--AGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 234
Query: 200 LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV--TGGVKPQALNKVKDPE 257
+ Y E VDI+S G + EMV +I + D + + K + G P+ + K++ P
Sbjct: 235 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PT 293
Query: 258 VKAFIE 263
V+ ++E
Sbjct: 294 VRNYVE 299
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 109/254 (42%), Gaps = 11/254 (4%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVC 90
+LG G+ +V D+ G E A + + L EVQLL+ L + I+
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ-KTDKESLLREVQLLKQLDHPNIMKL 115
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCI 150
Y + D + L + EV T G L + S + +QVL G+ Y+H ++ I
Sbjct: 116 YEFFEDKGYFYL--VGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK--I 171
Query: 151 IHRDLNCSNIFINGNI--GQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEEDYTEM 208
+HRDL N+ + ++I D G + S IGT Y+APE+ Y E
Sbjct: 172 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEK 231
Query: 209 VDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK--DPEVKAFIEKCI 266
D++S G+ L +++ P++ + I KKV G L + K K I K +
Sbjct: 232 CDVWSTGVILYILLSGCPPFNGANEY-DILKKVEKGKYTFELPQWKKVSESAKDLIRKML 290
Query: 267 AQ-PRARPSASELL 279
P R SA + L
Sbjct: 291 TYVPSMRISARDAL 304
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 117/246 (47%), Gaps = 18/246 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V A+D VA +LS ++ R + E+ L++ + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
K II +V+ ++ + + E+ + + + + H + L Q+L G+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 139
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE- 199
++LH+ IIHRDL SNI + + +KI D G A G S + T Y APE
Sbjct: 140 KHLHS--AGIIHRDLKPSNIVVKSDCT-LKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 200 LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV--TGGVKPQALNKVKDPE 257
+ Y E VDI+S G + EMV +I + D + + K + G P+ + K++ P
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PT 255
Query: 258 VKAFIE 263
V+ ++E
Sbjct: 256 VRNYVE 261
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 30/271 (11%)
Query: 28 YSD--LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNK 85
Y+D ++G+G+ VY+A + G VA +V +D NR E+Q++R L +
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNR---ELQIMRKLDHC 77
Query: 86 YII----VCYSVWLDDQHNTLNFITEVCTSGNLRT---YRKKHRHVSIKALKKWSKQVLE 138
I+ YS LN + + R Y + + + + +K + Q+
Sbjct: 78 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 137
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAP 198
L Y+H+ C HRD+ N+ ++ + +K+ D G A + R S I + Y AP
Sbjct: 138 SLAYIHSFGIC--HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 195
Query: 199 ELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQA---- 249
EL DYT +D++S G L E++ + + S D + +I K + + Q
Sbjct: 196 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 255
Query: 250 --LNKVKDPEVKAFIEKCIAQPRARPSASEL 278
+ K P++KA + +PR P A L
Sbjct: 256 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIAL 286
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 30/271 (11%)
Query: 28 YSD--LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNK 85
Y+D ++G+G+ VY+A + G VA +V +D NR E+Q++R L +
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNR---ELQIMRKLDHC 74
Query: 86 YII----VCYSVWLDDQHNTLNFITEVCTSGNLRT---YRKKHRHVSIKALKKWSKQVLE 138
I+ YS LN + + R Y + + + + +K + Q+
Sbjct: 75 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 134
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAP 198
L Y+H+ C HRD+ N+ ++ + +K+ D G A + R S I + Y AP
Sbjct: 135 SLAYIHSFGIC--HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 192
Query: 199 ELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQA---- 249
EL DYT +D++S G L E++ + + S D + +I K + + Q
Sbjct: 193 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 252
Query: 250 --LNKVKDPEVKAFIEKCIAQPRARPSASEL 278
+ K P++KA + +PR P A L
Sbjct: 253 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIAL 283
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 117/246 (47%), Gaps = 18/246 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V A+D VA +LS ++ R + E+ L++ + +
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
K II +V+ ++ + + E+ + + + + H + L Q+L G+
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 140
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE- 199
++LH+ IIHRDL SNI + + +KI D G A G S + T Y APE
Sbjct: 141 KHLHS--AGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 197
Query: 200 LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV--TGGVKPQALNKVKDPE 257
+ Y E VDI+S G + EMV +I + D + + K + G P+ + K++ P
Sbjct: 198 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PT 256
Query: 258 VKAFIE 263
V+ ++E
Sbjct: 257 VRNYVE 262
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 27/223 (12%)
Query: 13 GEPFVEVDPSGRFGRYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVN 70
G+PF +V P RY+ L +G GA V A+D VA ++ S F E
Sbjct: 36 GQPF-DVGP-----RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKI--SPF-EHQTYCQ 86
Query: 71 RLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLR---TYRK-KHRHVSI 126
R E+Q+L +++ +I + + +TL + +V +L Y+ K + +S
Sbjct: 87 RTLREIQILLRFRHENVIGIRDIL---RASTLEAMRDVYIVQDLMETDLYKLLKSQQLSN 143
Query: 127 KALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAA 186
+ + Q+L GL+Y+H+ ++HRDL SN+ IN +KI D G A I H
Sbjct: 144 DHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLINTTC-DLKICDFGLARIADPEHDH 200
Query: 187 HSI----IGTPEYMAPE--LYEEDYTEMVDIYSFGLCLLEMVT 223
+ T Y APE L + YT+ +DI+S G L EM++
Sbjct: 201 TGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 117/246 (47%), Gaps = 18/246 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V A+D VA +LS ++ R + E+ L++ + +
Sbjct: 24 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 81
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
K II +V+ ++ + + E+ + + + + H + L Q+L G+
Sbjct: 82 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 138
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE- 199
++LH+ IIHRDL SNI + + +KI D G A G S + T Y APE
Sbjct: 139 KHLHS--AGIIHRDLKPSNIVVKSDCT-LKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 195
Query: 200 LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV--TGGVKPQALNKVKDPE 257
+ Y E VDI+S G + EMV +I + D + + K + G P+ + K++ P
Sbjct: 196 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PT 254
Query: 258 VKAFIE 263
V+ ++E
Sbjct: 255 VRNYVE 260
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 117/246 (47%), Gaps = 18/246 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V A+D VA +LS ++ R + E+ L++ + +
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
K II +V+ ++ + + E+ + + + + H + L Q+L G+
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 133
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE- 199
++LH+ IIHRDL SNI + + +KI D G A G S + T Y APE
Sbjct: 134 KHLHS--AGIIHRDLKPSNIVVKSDCT-LKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 190
Query: 200 LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV--TGGVKPQALNKVKDPE 257
+ Y E VDI+S G + EMV +I + D + + K + G P+ + K++ P
Sbjct: 191 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PT 249
Query: 258 VKAFIE 263
V+ ++E
Sbjct: 250 VRNYVE 255
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 113 NSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 170
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +K+ D G A V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 171 NLMIDQQ-GYIKVTDFGLAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 227 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 253
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 117/246 (47%), Gaps = 18/246 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V A+D VA +LS ++ R + E+ L++ + +
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
K II +V+ ++ + + E+ + + + + H + L Q+L G+
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 140
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE- 199
++LH+ IIHRDL SNI + + +KI D G A G S + T Y APE
Sbjct: 141 KHLHS--AGIIHRDLKPSNIVVKSDCT-LKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 197
Query: 200 LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV--TGGVKPQALNKVKDPE 257
+ Y E VDI+S G + EMV +I + D + + K + G P+ + K++ P
Sbjct: 198 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PT 256
Query: 258 VKAFIE 263
V+ ++E
Sbjct: 257 VRNYVE 262
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 30/271 (11%)
Query: 28 YSD--LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNK 85
Y+D ++G+G+ VY+A + G VA +V +D NR E+Q++R L +
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNR---ELQIMRKLDHC 85
Query: 86 YII----VCYSVWLDDQHNTLNFITEVCTSGNLRT---YRKKHRHVSIKALKKWSKQVLE 138
I+ YS LN + + R Y + + + + +K + Q+
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAP 198
L Y+H+ C HRD+ N+ ++ + +K+ D G A + R S I + Y AP
Sbjct: 146 SLAYIHSFGIC--HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 203
Query: 199 ELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQA---- 249
EL DYT +D++S G L E++ + + S D + +I K + + Q
Sbjct: 204 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 263
Query: 250 --LNKVKDPEVKAFIEKCIAQPRARPSASEL 278
+ K P++KA + +PR P A L
Sbjct: 264 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIAL 294
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 117/246 (47%), Gaps = 18/246 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V A+D VA +LS ++ R + E+ L++ + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
K II +V+ ++ + + E+ + + + + H + L Q+L G+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYL---LYQMLCGI 139
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE- 199
++LH+ IIHRDL SNI + + +KI D G A G S + T Y APE
Sbjct: 140 KHLHS--AGIIHRDLKPSNIVVKSD-XTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 200 LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV--TGGVKPQALNKVKDPE 257
+ Y E VDI+S G + EMV +I + D + + K + G P+ + K++ P
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PT 255
Query: 258 VKAFIE 263
V+ ++E
Sbjct: 256 VRNYVE 261
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V A+D VA +LS ++ R + E+ L++ + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
K II +V+ ++ + + E+ + + + + H + L Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL---LYQMLCGI 139
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE- 199
++LH+ IIHRDL SNI + + +KI D G A G S + T Y APE
Sbjct: 140 KHLHS--AGIIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 200 LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV--TGGVKPQALNKVKDPE 257
+ Y E VDI+S G + EM+ + + D + + K + G P+ + K++ P
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ-PT 255
Query: 258 VKAFIE 263
V+ ++E
Sbjct: 256 VRTYVE 261
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 80/163 (49%), Gaps = 22/163 (13%)
Query: 139 GLEYLHTH-EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS--HAAHSIIGTPEY 195
GL YLH H +P IIHRD+ +NI ++ V +GD G A ++ H ++ GT +
Sbjct: 151 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDXHVXXAVRGTIGH 209
Query: 196 MAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSEC----DSVAKIYKKVTGGVKPQAL 250
+APE L +E D++ +G+ LLE++T + + D + V G +K + L
Sbjct: 210 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 269
Query: 251 NKV---------KDPEVKAFIEKCI----AQPRARPSASELLK 280
+ KD EV+ I+ + + P RP SE+++
Sbjct: 270 EALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVR 312
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 30/271 (11%)
Query: 28 YSD--LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNK 85
Y+D ++G+G+ VY+A + G VA +V +D NR E+Q++R L +
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNR---ELQIMRKLDHC 73
Query: 86 YII----VCYSVWLDDQHNTLNFITEVCTSGNLRT---YRKKHRHVSIKALKKWSKQVLE 138
I+ YS LN + + R Y + + + + +K + Q+
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAP 198
L Y+H+ C HRD+ N+ ++ + +K+ D G A + R S I + Y AP
Sbjct: 134 SLAYIHSFGIC--HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 191
Query: 199 ELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQA---- 249
EL DYT +D++S G L E++ + + S D + +I K + + Q
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 251
Query: 250 --LNKVKDPEVKAFIEKCIAQPRARPSASEL 278
+ K P++KA + +PR P A L
Sbjct: 252 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIAL 282
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 24/219 (10%)
Query: 31 LLGSGAVKKVYRAFDQEEG----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
+L SGA VY+ EG I VA ++R + P + E ++ ++ N +
Sbjct: 29 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNPH 85
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHT 145
+ + L +T+ IT++ G L Y ++H+ ++ + L W Q+ +G+ YL
Sbjct: 86 VCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---EYMAPE-LY 201
++HRDL N+ + VKI D G A ++G + G ++MA E +
Sbjct: 143 RR--LVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 202 EEDYTEMVDIYSFGLCLLEMVTM------EIPYSECDSV 234
YT D++S+G+ + E++T IP SE S+
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ + ++ Q++ EYLH+ + +I+RDL
Sbjct: 113 NSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 170
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 171 NLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 227 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 253
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 30/271 (11%)
Query: 28 YSD--LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNK 85
Y+D ++G+G+ VY+A + G VA +V +D NR E+Q++R L +
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNR---ELQIMRKLDHC 73
Query: 86 YII----VCYSVWLDDQHNTLNFITEVCTSGNLRT---YRKKHRHVSIKALKKWSKQVLE 138
I+ YS LN + + R Y + + + + +K + Q+
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAP 198
L Y+H+ C HRD+ N+ ++ + +K+ D G A + R S I + Y AP
Sbjct: 134 SLAYIHSFGIC--HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 191
Query: 199 ELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQA---- 249
EL DYT +D++S G L E++ + + S D + +I K + + Q
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 251
Query: 250 --LNKVKDPEVKAFIEKCIAQPRARPSASEL 278
+ K P++KA + +PR P A L
Sbjct: 252 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIAL 282
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 117/246 (47%), Gaps = 18/246 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V A+D VA +LS ++ R + E+ L++ + +
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
K II +V+ ++ + + E+ + + + + H + L Q+L G+
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 133
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE- 199
++LH+ IIHRDL SNI + + +KI D G A G S + T Y APE
Sbjct: 134 KHLHS--AGIIHRDLKPSNIVVKSDCT-LKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 190
Query: 200 LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV--TGGVKPQALNKVKDPE 257
+ Y E VDI+S G + EMV +I + D + + K + G P+ + K++ P
Sbjct: 191 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PT 249
Query: 258 VKAFIE 263
V+ ++E
Sbjct: 250 VRNYVE 255
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 123/290 (42%), Gaps = 39/290 (13%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+G G+ V++ +++ G VA + S +DPV+ E+++L+ LK+ ++
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLES--EDDPVIKKIALREIRMLKQLKHPNLVNLL 68
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
V+ + L+ + E C L + R V +K + Q L+ + + H H I
Sbjct: 69 EVF--RRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN--CI 124
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPELYEED--YTEM 208
HRD+ NI I + +K+ D GFA ++ G S + T Y +PEL D Y
Sbjct: 125 HRDVKPENILITKH-SVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPP 183
Query: 209 VDIYSFGLCLLEMVTMEIPYSECDSVAKIY--KKVTGGVKPQALN-----------KVKD 255
VD+++ G E+++ + V ++Y +K G + P+ K+ D
Sbjct: 184 VDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPD 243
Query: 256 PE---------------VKAFIEKCI-AQPRARPSASELLKDPFFSELND 289
PE ++ C+ P R + +LL P+F + +
Sbjct: 244 PEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIRE 293
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 117/246 (47%), Gaps = 18/246 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V A+D VA +LS ++ R + E+ L++ + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
K II +V+ ++ + + E+ + + + + H + L Q+L G+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 139
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE- 199
++LH+ IIHRDL SNI + + +KI D G A G S + T Y APE
Sbjct: 140 KHLHS--AGIIHRDLKPSNIVVKSDCT-LKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 200 LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV--TGGVKPQALNKVKDPE 257
+ Y E VDI+S G + EMV +I + D + + K + G P+ + K++ P
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PT 255
Query: 258 VKAFIE 263
V+ ++E
Sbjct: 256 VRNYVE 261
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 117/246 (47%), Gaps = 18/246 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V A+D VA +LS ++ R + E+ L++ + +
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
K II +V+ ++ + + E+ + + + + H + L Q+L G+
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 132
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE- 199
++LH+ IIHRDL SNI + + +KI D G A G S + T Y APE
Sbjct: 133 KHLHS--AGIIHRDLKPSNIVVKSDCT-LKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 189
Query: 200 LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV--TGGVKPQALNKVKDPE 257
+ Y E VDI+S G + EMV +I + D + + K + G P+ + K++ P
Sbjct: 190 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PT 248
Query: 258 VKAFIE 263
V+ ++E
Sbjct: 249 VRNYVE 254
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 124/276 (44%), Gaps = 34/276 (12%)
Query: 31 LLGSGAVKKVYRAFDQEEG----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
+LGSGA VY+ EG I VA ++R + P + E ++ ++ N +
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNPH 80
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHT 145
+ + L +T+ I ++ G L Y ++H+ ++ + L W Q+ +G+ YL
Sbjct: 81 VCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---EYMAPE-LY 201
++HRDL N+ + VKI D G A ++G + G ++MA E +
Sbjct: 138 RR--LVHRDLAARNVLVK-TPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 202 EEDYTEMVDIYSFGLCLLEMVTM------EIPYSECDSVAKIYKKVTGGVKPQALNKVKD 255
YT D++S+G+ + E++T IP SE S+ + G PQ +
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-----KGERLPQP--PICT 247
Query: 256 PEVKAFIEKC-IAQPRARPSASELLKDPFFSELNDD 290
+V + KC + +RP EL+ + FS++ D
Sbjct: 248 IDVYMIMRKCWMIDADSRPKFRELIIE--FSKMARD 281
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ + ++ Q++ EYLH+ + +I+RDL
Sbjct: 113 NSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 170
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 171 NLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 227 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 253
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ + ++ Q++ EYLH+ + +I+RDL
Sbjct: 108 NSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 165
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 166 NLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 221
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 222 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 248
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 109/254 (42%), Gaps = 11/254 (4%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVC 90
+LG G+ +V D+ G E A + + L EVQLL+ L + I+
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ-KTDKESLLREVQLLKQLDHPNIMKL 97
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCI 150
Y + D + L + EV T G L + S + +QVL G+ Y+H ++ I
Sbjct: 98 YEFFEDKGYFYL--VGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK--I 153
Query: 151 IHRDLNCSNIFINGNI--GQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEEDYTEM 208
+HRDL N+ + ++I D G + S IGT Y+APE+ Y E
Sbjct: 154 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEK 213
Query: 209 VDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK--DPEVKAFIEKCI 266
D++S G+ L +++ P++ + I KKV G L + K K I K +
Sbjct: 214 CDVWSTGVILYILLSGCPPFNGANEY-DILKKVEKGKYTFELPQWKKVSESAKDLIRKML 272
Query: 267 AQ-PRARPSASELL 279
P R SA + L
Sbjct: 273 TYVPSMRISARDAL 286
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ + ++ Q++ EYLH+ + +I+RDL
Sbjct: 134 NSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 191
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 192 NLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 247
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 248 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 274
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 30/271 (11%)
Query: 28 YSD--LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNK 85
Y+D ++G+G+ VY+A + G VA +V +D NR E+Q++R L +
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNR---ELQIMRKLDHC 81
Query: 86 YII----VCYSVWLDDQHNTLNFITEVCTSGNLRT---YRKKHRHVSIKALKKWSKQVLE 138
I+ YS LN + + R Y + + + + +K + Q+
Sbjct: 82 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 141
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAP 198
L Y+H+ C HRD+ N+ ++ + +K+ D G A + R S I + Y AP
Sbjct: 142 SLAYIHSFGIC--HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 199
Query: 199 ELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQA---- 249
EL DYT +D++S G L E++ + + S D + +I K + + Q
Sbjct: 200 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 259
Query: 250 --LNKVKDPEVKAFIEKCIAQPRARPSASEL 278
+ K P++KA + +PR P A L
Sbjct: 260 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIAL 290
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ + ++ Q++ EYLH+ + +I+RDL
Sbjct: 113 NSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 170
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 171 NLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 227 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 253
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 20/198 (10%)
Query: 102 LNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIF 161
L I + G+L T K + + +K + ++ L++LH+ II+RDL NI
Sbjct: 102 LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS--LGIIYRDLKPENIL 159
Query: 162 INGNIGQVKIGDLGFAA-IVGRSHAAHSIIGTPEYMAPELY-EEDYTEMVDIYSFGLCLL 219
++ G +K+ D G + + A+S GT EYMAPE+ +T+ D +SFG+ +
Sbjct: 160 LDEE-GHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMF 218
Query: 220 EMVTMEIPYSECD---SVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIAQ-PRARPSA 275
EM+T +P+ D ++ I K G PQ L+ PE ++ + + P R A
Sbjct: 219 EMLTGTLPFQGKDRKETMTMILKAKLG--MPQFLS----PEAQSLLRMLFKRNPANRLGA 272
Query: 276 S-----ELLKDPFFSELN 288
E+ + FFS ++
Sbjct: 273 GPDGVEEIKRHSFFSTID 290
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 24/219 (10%)
Query: 31 LLGSGAVKKVYRAFDQEEG----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
+L SGA VY+ EG I VA ++R + P + E ++ ++ N +
Sbjct: 22 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNPH 78
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHT 145
+ + L +T+ IT++ G L Y ++H+ ++ + L W Q+ +G+ YL
Sbjct: 79 VCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---EYMAPE-LY 201
++HRDL N+ + VKI D G A ++G + G ++MA E +
Sbjct: 136 RR--LVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 202 EEDYTEMVDIYSFGLCLLEMVTM------EIPYSECDSV 234
YT D++S+G+ + E++T IP SE S+
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 231
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 30/271 (11%)
Query: 28 YSD--LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNK 85
Y+D ++G+G+ VY+A + G VA +V +D NR E+Q++R L +
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNR---ELQIMRKLDHC 86
Query: 86 YII----VCYSVWLDDQHNTLNFITEVCTSGNLRT---YRKKHRHVSIKALKKWSKQVLE 138
I+ YS LN + + R Y + + + + +K + Q+
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 146
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAP 198
L Y+H+ C HRD+ N+ ++ + +K+ D G A + R S I + Y AP
Sbjct: 147 SLAYIHSFGIC--HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 204
Query: 199 ELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQA---- 249
EL DYT +D++S G L E++ + + S D + +I K + + Q
Sbjct: 205 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 264
Query: 250 --LNKVKDPEVKAFIEKCIAQPRARPSASEL 278
+ K P++KA + +PR P A L
Sbjct: 265 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIAL 295
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 30/271 (11%)
Query: 28 YSD--LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNK 85
Y+D ++G+G+ VY+A + G VA +V +D NR E+Q++R L +
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNR---ELQIMRKLDHC 92
Query: 86 YII----VCYSVWLDDQHNTLNFITEVCTSGNLRT---YRKKHRHVSIKALKKWSKQVLE 138
I+ YS LN + + R Y + + + + +K + Q+
Sbjct: 93 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 152
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAP 198
L Y+H+ C HRD+ N+ ++ + +K+ D G A + R S I + Y AP
Sbjct: 153 SLAYIHSFGIC--HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 210
Query: 199 ELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQA---- 249
EL DYT +D++S G L E++ + + S D + +I K + + Q
Sbjct: 211 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 270
Query: 250 --LNKVKDPEVKAFIEKCIAQPRARPSASEL 278
+ K P++KA + +PR P A L
Sbjct: 271 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIAL 301
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 20/198 (10%)
Query: 102 LNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIF 161
L I + G+L T K + + +K + ++ L++LH+ II+RDL NI
Sbjct: 101 LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS--LGIIYRDLKPENIL 158
Query: 162 INGNIGQVKIGDLGFAA-IVGRSHAAHSIIGTPEYMAPELY-EEDYTEMVDIYSFGLCLL 219
++ G +K+ D G + + A+S GT EYMAPE+ +T+ D +SFG+ +
Sbjct: 159 LDEE-GHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMF 217
Query: 220 EMVTMEIPYSECD---SVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIAQ-PRARPSA 275
EM+T +P+ D ++ I K G PQ L+ PE ++ + + P R A
Sbjct: 218 EMLTGTLPFQGKDRKETMTMILKAKLG--MPQFLS----PEAQSLLRMLFKRNPANRLGA 271
Query: 276 S-----ELLKDPFFSELN 288
E+ + FFS ++
Sbjct: 272 GPDGVEEIKRHSFFSTID 289
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 30/271 (11%)
Query: 28 YSD--LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNK 85
Y+D ++G+G+ VY+A + G VA +V +D NR E+Q++R L +
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNR---ELQIMRKLDHC 85
Query: 86 YII----VCYSVWLDDQHNTLNFITEVCTSGNLRT---YRKKHRHVSIKALKKWSKQVLE 138
I+ YS LN + + R Y + + + + +K + Q+
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAP 198
L Y+H+ C HRD+ N+ ++ + +K+ D G A + R S I + Y AP
Sbjct: 146 SLAYIHSFGIC--HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 203
Query: 199 ELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQA---- 249
EL DYT +D++S G L E++ + + S D + +I K + + Q
Sbjct: 204 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 263
Query: 250 --LNKVKDPEVKAFIEKCIAQPRARPSASEL 278
+ K P++KA + +PR P A L
Sbjct: 264 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIAL 294
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 128/274 (46%), Gaps = 21/274 (7%)
Query: 2 PAANSNMSDRDGEPF-VEVDPSG--RFGRYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQ 56
P + + S RD + VE+ S RY +L +GSGA V A+D VA
Sbjct: 2 PLGSMSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK- 60
Query: 57 VRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLD----DQHNTLNFITEVCTSG 112
+LS ++ R + E+ L++ + +K II +V+ ++ + + E+ +
Sbjct: 61 -KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN 119
Query: 113 NLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIG 172
+ + + H + L Q+L G+++LH+ IIHRDL SNI + + +KI
Sbjct: 120 LCQVIQMELDHERMSYL---LYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDC-TLKIL 173
Query: 173 DLGFAAIVGRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSEC 231
D G A G S + T Y APE + Y E VD++S G + EMV +I +
Sbjct: 174 DFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGR 233
Query: 232 DSVAKIYKKV--TGGVKPQALNKVKDPEVKAFIE 263
D + + K + G P+ + K++ P V+ ++E
Sbjct: 234 DYIDQWNKVIEQLGTPCPEFMKKLQ-PTVRTYVE 266
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 22/229 (9%)
Query: 71 RLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALK 130
R E +L + + +I+ + + L I + G+L T K + + +K
Sbjct: 72 RTKMERDILVEVNHPFIVKLHYAF--QTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVK 129
Query: 131 KWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA-IVGRSHAAHSI 189
+ ++ L++LH+ II+RDL NI ++ G +K+ D G + + A+S
Sbjct: 130 FYLAELALALDHLHS--LGIIYRDLKPENILLDEE-GHIKLTDFGLSKESIDHEKKAYSF 186
Query: 190 IGTPEYMAPELY-EEDYTEMVDIYSFGLCLLEMVTMEIPYSECD---SVAKIYKKVTGGV 245
GT EYMAPE+ +T+ D +SFG+ + EM+T +P+ D ++ I K G
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG-- 244
Query: 246 KPQALNKVKDPEVKAFIEKCIAQ-PRARPSAS-----ELLKDPFFSELN 288
PQ L+ PE ++ + + P R A E+ + FFS ++
Sbjct: 245 MPQFLS----PEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTID 289
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 117/246 (47%), Gaps = 18/246 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V A+D VA +LS ++ R + E+ L++ + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
K II +V+ ++ + + E+ + + + + H + L Q+L G+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 139
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE- 199
++LH+ IIHRDL SNI + + +KI D G A G S + T Y APE
Sbjct: 140 KHLHS--AGIIHRDLKPSNIVVKSD-XTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 200 LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV--TGGVKPQALNKVKDPE 257
+ Y E VDI+S G + EMV +I + D + + K + G P+ + K++ P
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PT 255
Query: 258 VKAFIE 263
V+ ++E
Sbjct: 256 VRNYVE 261
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V A+D VA +LS ++ R + E+ L++ + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
K II +V+ ++ + + E+ + + + + H + L Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL---LYQMLCGI 139
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE- 199
++LH+ IIHRDL SNI + + +KI D G A G S + T Y APE
Sbjct: 140 KHLHS--AGIIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 200 LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV--TGGVKPQALNKVKDPE 257
+ Y E VDI+S G + EM+ + + D + + K + G P+ + K++ P
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ-PT 255
Query: 258 VKAFIE 263
V+ ++E
Sbjct: 256 VRTYVE 261
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 30/271 (11%)
Query: 28 YSD--LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNK 85
Y+D ++G+G+ VY+A + G VA +V +D NR E+Q++R L +
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNR---ELQIMRKLDHC 101
Query: 86 YII----VCYSVWLDDQHNTLNFITEVCTSGNLRT---YRKKHRHVSIKALKKWSKQVLE 138
I+ YS LN + + R Y + + + + +K + Q+
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 161
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAP 198
L Y+H+ C HRD+ N+ ++ + +K+ D G A + R S I + Y AP
Sbjct: 162 SLAYIHSFGIC--HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 219
Query: 199 ELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQA---- 249
EL DYT +D++S G L E++ + + S D + +I K + + Q
Sbjct: 220 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 279
Query: 250 --LNKVKDPEVKAFIEKCIAQPRARPSASEL 278
+ K P++KA + +PR P A L
Sbjct: 280 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIAL 310
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 30/271 (11%)
Query: 28 YSD--LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNK 85
Y+D ++G+G+ VY+A + G VA +V +D NR E+Q++R L +
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNR---ELQIMRKLDHC 78
Query: 86 YII----VCYSVWLDDQHNTLNFITEVCTSGNLRT---YRKKHRHVSIKALKKWSKQVLE 138
I+ YS LN + + R Y + + + + +K + Q+
Sbjct: 79 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 138
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAP 198
L Y+H+ C HRD+ N+ ++ + +K+ D G A + R S I + Y AP
Sbjct: 139 SLAYIHSFGIC--HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 196
Query: 199 ELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQA---- 249
EL DYT +D++S G L E++ + + S D + +I K + + Q
Sbjct: 197 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 256
Query: 250 --LNKVKDPEVKAFIEKCIAQPRARPSASEL 278
+ K P++KA + +PR P A L
Sbjct: 257 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIAL 287
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 30/271 (11%)
Query: 28 YSD--LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNK 85
Y+D ++G+G+ VY+A + G VA +V +D NR E+Q++R L +
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNR---ELQIMRKLDHC 109
Query: 86 YII----VCYSVWLDDQHNTLNFITEVCTSGNLRT---YRKKHRHVSIKALKKWSKQVLE 138
I+ YS LN + + R Y + + + + +K + Q+
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 169
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAP 198
L Y+H+ C HRD+ N+ ++ + +K+ D G A + R S I + Y AP
Sbjct: 170 SLAYIHSFGIC--HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 227
Query: 199 ELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQA---- 249
EL DYT +D++S G L E++ + + S D + +I K + + Q
Sbjct: 228 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 287
Query: 250 --LNKVKDPEVKAFIEKCIAQPRARPSASEL 278
+ K P++KA + +PR P A L
Sbjct: 288 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIAL 318
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 113 NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 170
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPEY+AP + + Y + VD ++ G+
Sbjct: 171 NLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPAIILSKGYNKAVDWWALGV 226
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 227 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 253
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 116/265 (43%), Gaps = 22/265 (8%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV---RLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
LLGSG VY + + VA V R+S + E P R+ EV LL+ + + +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVVLLKKVSSGFS 89
Query: 88 IVCYSV-WLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
V + W + + + + +L + + + + + + QVLE + H H
Sbjct: 90 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR--HCH 147
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
++HRD+ NI I+ N G++K+ D G A++ + GT Y PE Y
Sbjct: 148 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTRVYSPPEWIRYHRY 206
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIE 263
+ ++S G+ L +MV +IP+ + + ++ Q + + E + I
Sbjct: 207 HGRSAAVWSLGILLYDMVCGDIPFEHDEEI----------IRGQVFFRQRVSSECQHLIR 256
Query: 264 KCIA-QPRARPSASELLKDPFFSEL 287
C+A +P RP+ E+ P+ ++
Sbjct: 257 WCLALRPSDRPTFEEIQNHPWMQDV 281
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 30/271 (11%)
Query: 28 YSD--LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNK 85
Y+D ++G+G+ VY+A + G VA +V +D NR E+Q++R L +
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNR---ELQIMRKLDHC 107
Query: 86 YII----VCYSVWLDDQHNTLNFITEVCTSGNLRT---YRKKHRHVSIKALKKWSKQVLE 138
I+ YS LN + + R Y + + + + +K + Q+
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAP 198
L Y+H+ C HRD+ N+ ++ + +K+ D G A + R S I + Y AP
Sbjct: 168 SLAYIHSFGIC--HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 225
Query: 199 ELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQA---- 249
EL DYT +D++S G L E++ + + S D + +I K + + Q
Sbjct: 226 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 285
Query: 250 --LNKVKDPEVKAFIEKCIAQPRARPSASEL 278
+ K P++KA + +PR P A L
Sbjct: 286 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIAL 316
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 30/271 (11%)
Query: 28 YSD--LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNK 85
Y+D ++G+G+ VY+A + G VA +V +D NR E+Q++R L +
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNR---ELQIMRKLDHC 107
Query: 86 YII----VCYSVWLDDQHNTLNFITEVCTSGNLRT---YRKKHRHVSIKALKKWSKQVLE 138
I+ YS LN + + R Y + + + + +K + Q+
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAP 198
L Y+H+ C HRD+ N+ ++ + +K+ D G A + R S I + Y AP
Sbjct: 168 SLAYIHSFGIC--HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 225
Query: 199 ELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQA---- 249
EL DYT +D++S G L E++ + + S D + +I K + + Q
Sbjct: 226 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 285
Query: 250 --LNKVKDPEVKAFIEKCIAQPRARPSASEL 278
+ K P++KA + +PR P A L
Sbjct: 286 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIAL 316
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 116/265 (43%), Gaps = 22/265 (8%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV---RLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
LLGSG VY + + VA V R+S + E P R+ EV LL+ + + +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVVLLKKVSSGFS 69
Query: 88 IVCYSV-WLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
V + W + + + + +L + + + + + + QVLE + H H
Sbjct: 70 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR--HCH 127
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
++HRD+ NI I+ N G++K+ D G A++ + GT Y PE Y
Sbjct: 128 NXGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTRVYSPPEWIRYHRY 186
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIE 263
+ ++S G+ L +MV +IP+ + + ++ Q + + E + I
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFEHDEEI----------IRGQVFFRQRVSXECQHLIR 236
Query: 264 KCIA-QPRARPSASELLKDPFFSEL 287
C+A +P RP+ E+ P+ ++
Sbjct: 237 WCLALRPSDRPTFEEIQNHPWMQDV 261
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ + ++ Q++ EYLH+ + +I+RDL
Sbjct: 114 NSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 171
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 172 NLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 228 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 254
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 5/129 (3%)
Query: 102 LNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIF 161
L F+ E G+L + ++ R + + + +S ++ L YL HE II+RDL N+
Sbjct: 128 LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL--HERGIIYRDLKLDNVL 185
Query: 162 INGNIGQVKIGDLGFAAIVGR-SHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGLCLL 219
++ G +K+ D G R + GTP Y+APE L EDY VD ++ G+ +
Sbjct: 186 LDSE-GHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMF 244
Query: 220 EMVTMEIPY 228
EM+ P+
Sbjct: 245 EMMAGRSPF 253
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 116/265 (43%), Gaps = 22/265 (8%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV---RLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
LLGSG VY + + VA V R+S + E P R+ EV LL+ + + +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVVLLKKVSSGFS 74
Query: 88 IVCYSV-WLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
V + W + + + + +L + + + + + + QVLE + H H
Sbjct: 75 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR--HCH 132
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
++HRD+ NI I+ N G++K+ D G A++ + GT Y PE Y
Sbjct: 133 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTRVYSPPEWIRYHRY 191
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIE 263
+ ++S G+ L +MV +IP+ + + ++ Q + + E + I
Sbjct: 192 HGRSAAVWSLGILLYDMVCGDIPFEHDEEI----------IRGQVFFRQRVSSECQHLIR 241
Query: 264 KCIA-QPRARPSASELLKDPFFSEL 287
C+A +P RP+ E+ P+ ++
Sbjct: 242 WCLALRPSDRPTFEEIQNHPWMQDV 266
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 116/265 (43%), Gaps = 22/265 (8%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV---RLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
LLGSG VY + + VA V R+S + E P R+ EV LL+ + + +
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVVLLKKVSSGFS 116
Query: 88 IVCYSV-WLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
V + W + + + + +L + + + + + + QVLE + H H
Sbjct: 117 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR--HCH 174
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
++HRD+ NI I+ N G++K+ D G A++ + GT Y PE Y
Sbjct: 175 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTRVYSPPEWIRYHRY 233
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIE 263
+ ++S G+ L +MV +IP+ + + ++ Q + + E + I
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIPFEHDEEI----------IRGQVFFRQRVSSECQHLIR 283
Query: 264 KCIA-QPRARPSASELLKDPFFSEL 287
C+A +P RP+ E+ P+ ++
Sbjct: 284 WCLALRPSDRPTFEEIQNHPWMQDV 308
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 12/204 (5%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNR--LHSEVQLLRTLKNKYIIV 89
LGSG V + + G E A ++ S V+R + EV +LR +++ II
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPC 149
+ ++ + + I E+ + G L + + ++ ++ KQ+L+G+ YLH+
Sbjct: 73 LHDIF--ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKR-- 128
Query: 150 IIHRDLNCSNI-FINGNIG--QVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
I H DL NI ++ N+ ++K+ D G A + + +I GTPE++APE+ YE
Sbjct: 129 IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPL 188
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPY 228
E D++S G+ +++ P+
Sbjct: 189 GLE-ADMWSIGVITYILLSGASPF 211
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V A+D VA +LS ++ R + E+ L++ + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
K II +V+ ++ + + E+ + + + + H + L Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 139
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE- 199
++LH+ IIHRDL SNI + + +KI D G A G S + T Y APE
Sbjct: 140 KHLHS--AGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 200 LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV--TGGVKPQALNKVKDPE 257
+ Y E VDI+S G + EM+ + + D + + K + G P+ + K++ P
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ-PT 255
Query: 258 VKAFIE 263
V+ ++E
Sbjct: 256 VRTYVE 261
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 114/263 (43%), Gaps = 15/263 (5%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG+GA V+R ++ G A V H S+ + E+Q + L++ ++ +
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETV----RKEIQTMSVLRHPTLVNLH 114
Query: 92 SVWLDDQHNTLNFITEVCTSGNL-RTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCI 150
+ DD N + I E + G L +H +S ++ +QV +GL H HE
Sbjct: 115 DAFEDD--NEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGL--CHMHENNY 170
Query: 151 IHRDLNCSNI-FINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYE-EDYTEM 208
+H DL NI F ++K+ D G A + + GT E+ APE+ E +
Sbjct: 171 VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYY 230
Query: 209 VDIYSFGLCLLEMVTMEIPYS--ECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK-C 265
D++S G+ +++ P+ D + K + A + + + + K FI K
Sbjct: 231 TDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISE-DGKDFIRKLL 289
Query: 266 IAQPRARPSASELLKDPFFSELN 288
+A P R + + L+ P+ + N
Sbjct: 290 LADPNTRMTIHQALEHPWLTPGN 312
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ + ++ Q++ EYLH+ + +I+RDL
Sbjct: 106 NSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 163
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 164 NLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 219
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 220 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 246
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 30/271 (11%)
Query: 28 YSD--LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNK 85
Y+D ++G+G+ VY+A + G VA +V +D NR E+Q++R L +
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNR---ELQIMRKLDHC 152
Query: 86 YII----VCYSVWLDDQHNTLNFITEVCTSGNLRT---YRKKHRHVSIKALKKWSKQVLE 138
I+ YS LN + + R Y + + + + +K + Q+
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 212
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAP 198
L Y+H+ C HRD+ N+ ++ + +K+ D G A + R S I + Y AP
Sbjct: 213 SLAYIHSFGIC--HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 270
Query: 199 ELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQA---- 249
EL DYT +D++S G L E++ + + S D + +I K + + Q
Sbjct: 271 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 330
Query: 250 --LNKVKDPEVKAFIEKCIAQPRARPSASEL 278
+ K P++KA + +PR P A L
Sbjct: 331 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIAL 361
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 12/204 (5%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNR--LHSEVQLLRTLKNKYIIV 89
LGSG V + + G E A ++ S V+R + EV +LR +++ II
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPC 149
+ ++ + + I E+ + G L + + ++ ++ KQ+L+G+ YLH+
Sbjct: 80 LHDIF--ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKR-- 135
Query: 150 IIHRDLNCSNI-FINGNIG--QVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
I H DL NI ++ N+ ++K+ D G A + + +I GTPE++APE+ YE
Sbjct: 136 IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPL 195
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPY 228
E D++S G+ +++ P+
Sbjct: 196 GLE-ADMWSIGVITYILLSGASPF 218
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ + ++ Q++ EYLH+ + +I+RDL
Sbjct: 113 NSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 170
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 171 NLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 227 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 253
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 116/265 (43%), Gaps = 22/265 (8%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV---RLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
LLGSG VY + + VA V R+S + E P R+ EV LL+ + + +
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVVLLKKVSSGFS 108
Query: 88 IVCYSV-WLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
V + W + + + + +L + + + + + + QVLE + H H
Sbjct: 109 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR--HCH 166
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
++HRD+ NI I+ N G++K+ D G A++ + GT Y PE Y
Sbjct: 167 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTRVYSPPEWIRYHRY 225
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIE 263
+ ++S G+ L +MV +IP+ + + ++ Q + + E + I
Sbjct: 226 HGRSAAVWSLGILLYDMVCGDIPFEHDEEI----------IRGQVFFRQRVSSECQHLIR 275
Query: 264 KCIA-QPRARPSASELLKDPFFSEL 287
C+A +P RP+ E+ P+ ++
Sbjct: 276 WCLALRPSDRPTFEEIQNHPWMQDV 300
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ + ++ Q++ EYLH+ + +I+RDL
Sbjct: 113 NSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 170
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 171 NLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 227 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 253
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 116/265 (43%), Gaps = 22/265 (8%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV---RLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
LLGSG VY + + VA V R+S + E P R+ EV LL+ + + +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVVLLKKVSSGFS 88
Query: 88 IVCYSV-WLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
V + W + + + + +L + + + + + + QVLE + H H
Sbjct: 89 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR--HCH 146
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
++HRD+ NI I+ N G++K+ D G A++ + GT Y PE Y
Sbjct: 147 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTRVYSPPEWIRYHRY 205
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIE 263
+ ++S G+ L +MV +IP+ + + ++ Q + + E + I
Sbjct: 206 HGRSAAVWSLGILLYDMVCGDIPFEHDEEI----------IRGQVFFRQRVSSECQHLIR 255
Query: 264 KCIA-QPRARPSASELLKDPFFSEL 287
C+A +P RP+ E+ P+ ++
Sbjct: 256 WCLALRPSDRPTFEEIQNHPWMQDV 280
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 116/265 (43%), Gaps = 22/265 (8%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV---RLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
LLGSG VY + + VA V R+S + E P R+ EV LL+ + + +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVVLLKKVSSGFS 74
Query: 88 IVCYSV-WLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
V + W + + + + +L + + + + + + QVLE + H H
Sbjct: 75 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR--HCH 132
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
++HRD+ NI I+ N G++K+ D G A++ + GT Y PE Y
Sbjct: 133 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTRVYSPPEWIRYHRY 191
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIE 263
+ ++S G+ L +MV +IP+ + + ++ Q + + E + I
Sbjct: 192 HGRSAAVWSLGILLYDMVCGDIPFEHDEEI----------IRGQVFFRQRVSSECQHLIR 241
Query: 264 KCIA-QPRARPSASELLKDPFFSEL 287
C+A +P RP+ E+ P+ ++
Sbjct: 242 WCLALRPSDRPTFEEIQNHPWMQDV 266
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 129/298 (43%), Gaps = 48/298 (16%)
Query: 20 DPSGRFGR----YSDLLGSGAVKKVYRA----FDQE---EGIEVAWNQVRLSHFSEDPVL 68
DP F R LG GA +V A D++ E + VA ++ +D
Sbjct: 27 DPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--- 83
Query: 69 VNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR----- 122
++ L SE+++++ + K+K II D L I E + GNLR Y + R
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIIHLLGACTQD--GPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 123 -----------HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKI 171
++ K L + Q+ G+EYL + + IHRDL N+ + N +KI
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTEN-NVMKI 198
Query: 172 GDLGFAAIVGR-SHAAHSIIGT--PEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTM--- 224
D G A + + + G ++MAPE L++ YT D++SFG+ + E+ T+
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 225 EIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCI-AQPRARPSASELLKD 281
P + + K+ K+ KP E+ + C A P RP+ +L++D
Sbjct: 259 PYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 114/263 (43%), Gaps = 15/263 (5%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG+GA V+R ++ G A V H S+ + E+Q + L++ ++ +
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETV----RKEIQTMSVLRHPTLVNLH 220
Query: 92 SVWLDDQHNTLNFITEVCTSGNL-RTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCI 150
+ DD N + I E + G L +H +S ++ +QV +GL H HE
Sbjct: 221 DAFEDD--NEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGL--CHMHENNY 276
Query: 151 IHRDLNCSNI-FINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYE-EDYTEM 208
+H DL NI F ++K+ D G A + + GT E+ APE+ E +
Sbjct: 277 VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYY 336
Query: 209 VDIYSFGLCLLEMVTMEIPYS--ECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK-C 265
D++S G+ +++ P+ D + K + A + + + + K FI K
Sbjct: 337 TDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISE-DGKDFIRKLL 395
Query: 266 IAQPRARPSASELLKDPFFSELN 288
+A P R + + L+ P+ + N
Sbjct: 396 LADPNTRMTIHQALEHPWLTPGN 418
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 30/271 (11%)
Query: 28 YSD--LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNK 85
Y+D ++G+G+ VY+A + G VA +V +D NR E+Q++R L +
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNR---ELQIMRKLDHC 111
Query: 86 YII----VCYSVWLDDQHNTLNFITEVCTSGNLRT---YRKKHRHVSIKALKKWSKQVLE 138
I+ YS LN + + R Y + + + + +K + Q+
Sbjct: 112 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 171
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAP 198
L Y+H+ C HRD+ N+ ++ + +K+ D G A + R S I + Y AP
Sbjct: 172 SLAYIHSFGIC--HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 229
Query: 199 ELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQA---- 249
EL DYT +D++S G L E++ + + S D + +I K + + Q
Sbjct: 230 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 289
Query: 250 --LNKVKDPEVKAFIEKCIAQPRARPSASEL 278
+ K P++KA + +PR P A L
Sbjct: 290 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIAL 320
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 116/265 (43%), Gaps = 22/265 (8%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV---RLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
LLGSG VY + + VA V R+S + E P R+ EV LL+ + + +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVVLLKKVSSGFS 73
Query: 88 IVCYSV-WLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
V + W + + + + +L + + + + + + QVLE + H H
Sbjct: 74 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR--HCH 131
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
++HRD+ NI I+ N G++K+ D G A++ + GT Y PE Y
Sbjct: 132 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTRVYSPPEWIRYHRY 190
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIE 263
+ ++S G+ L +MV +IP+ + + ++ Q + + E + I
Sbjct: 191 HGRSAAVWSLGILLYDMVCGDIPFEHDEEI----------IRGQVFFRQRVSSECQHLIR 240
Query: 264 KCIA-QPRARPSASELLKDPFFSEL 287
C+A +P RP+ E+ P+ ++
Sbjct: 241 WCLALRPSDRPTFEEIQNHPWMQDV 265
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 116/265 (43%), Gaps = 22/265 (8%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV---RLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
LLGSG VY + + VA V R+S + E P R+ EV LL+ + + +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVVLLKKVSSGFS 89
Query: 88 IVCYSV-WLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
V + W + + + + +L + + + + + + QVLE + H H
Sbjct: 90 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR--HCH 147
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
++HRD+ NI I+ N G++K+ D G A++ + GT Y PE Y
Sbjct: 148 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTRVYSPPEWIRYHRY 206
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIE 263
+ ++S G+ L +MV +IP+ + + ++ Q + + E + I
Sbjct: 207 HGRSAAVWSLGILLYDMVCGDIPFEHDEEI----------IRGQVFFRQRVSXECQHLIR 256
Query: 264 KCIA-QPRARPSASELLKDPFFSEL 287
C+A +P RP+ E+ P+ ++
Sbjct: 257 WCLALRPSDRPTFEEIQNHPWMQDV 281
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 116/265 (43%), Gaps = 22/265 (8%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV---RLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
LLGSG VY + + VA V R+S + E P R+ EV LL+ + + +
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVVLLKKVSSGFS 96
Query: 88 IVCYSV-WLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
V + W + + + + +L + + + + + + QVLE + H H
Sbjct: 97 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR--HCH 154
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
++HRD+ NI I+ N G++K+ D G A++ + GT Y PE Y
Sbjct: 155 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTRVYSPPEWIRYHRY 213
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIE 263
+ ++S G+ L +MV +IP+ + + ++ Q + + E + I
Sbjct: 214 HGRSAAVWSLGILLYDMVCGDIPFEHDEEI----------IRGQVFFRQRVSXECQHLIR 263
Query: 264 KCIA-QPRARPSASELLKDPFFSEL 287
C+A +P RP+ E+ P+ ++
Sbjct: 264 WCLALRPSDRPTFEEIQNHPWMQDV 288
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 116/265 (43%), Gaps = 22/265 (8%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV---RLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
LLGSG VY + + VA V R+S + E P R+ EV LL+ + + +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVVLLKKVSSGFS 69
Query: 88 IVCYSV-WLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
V + W + + + + +L + + + + + + QVLE + H H
Sbjct: 70 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR--HCH 127
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
++HRD+ NI I+ N G++K+ D G A++ + GT Y PE Y
Sbjct: 128 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTRVYSPPEWIRYHRY 186
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIE 263
+ ++S G+ L +MV +IP+ + + ++ Q + + E + I
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFEHDEEI----------IRGQVFFRQRVSSECQHLIR 236
Query: 264 KCIA-QPRARPSASELLKDPFFSEL 287
C+A +P RP+ E+ P+ ++
Sbjct: 237 WCLALRPSDRPTFEEIQNHPWMQDV 261
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 116/265 (43%), Gaps = 22/265 (8%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV---RLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
LLGSG VY + + VA V R+S + E P R+ EV LL+ + + +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVVLLKKVSSGFS 89
Query: 88 IVCYSV-WLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
V + W + + + + +L + + + + + + QVLE + H H
Sbjct: 90 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR--HCH 147
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
++HRD+ NI I+ N G++K+ D G A++ + GT Y PE Y
Sbjct: 148 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTRVYSPPEWIRYHRY 206
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIE 263
+ ++S G+ L +MV +IP+ + + ++ Q + + E + I
Sbjct: 207 HGRSAAVWSLGILLYDMVCGDIPFEHDEEI----------IRGQVFFRQRVSXECQHLIR 256
Query: 264 KCIA-QPRARPSASELLKDPFFSEL 287
C+A +P RP+ E+ P+ ++
Sbjct: 257 WCLALRPXDRPTFEEIQNHPWMQDV 281
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 24/219 (10%)
Query: 31 LLGSGAVKKVYRAFDQEEG----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
+LGSGA VY+ EG I VA ++R + P + E ++ ++ N +
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNPH 80
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHT 145
+ + L +T+ I ++ G L Y ++H+ ++ + L W Q+ +G+ YL
Sbjct: 81 VCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---EYMAPE-LY 201
++HRDL N+ + VKI D G A ++G + G ++MA E +
Sbjct: 138 RR--LVHRDLAARNVLVK-TPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 202 EEDYTEMVDIYSFGLCLLEMVTM------EIPYSECDSV 234
YT D++S+G+ + E++T IP SE S+
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 233
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 116/265 (43%), Gaps = 22/265 (8%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV---RLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
LLGSG VY + + VA V R+S + E P R+ EV LL+ + + +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVVLLKKVSSGFS 74
Query: 88 IVCYSV-WLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
V + W + + + + +L + + + + + + QVLE + H H
Sbjct: 75 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR--HCH 132
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
++HRD+ NI I+ N G++K+ D G A++ + GT Y PE Y
Sbjct: 133 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTRVYSPPEWIRYHRY 191
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIE 263
+ ++S G+ L +MV +IP+ + + ++ Q + + E + I
Sbjct: 192 HGRSAAVWSLGILLYDMVCGDIPFEHDEEI----------IRGQVFFRQRVSSECQHLIR 241
Query: 264 KCIA-QPRARPSASELLKDPFFSEL 287
C+A +P RP+ E+ P+ ++
Sbjct: 242 WCLALRPSDRPTFEEIQNHPWMQDV 266
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 103/219 (47%), Gaps = 11/219 (5%)
Query: 27 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
++ +LG G+ V A + E A + H ++ V + E ++ L + +
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK-VPYVTRERDVMSRLDHPF 91
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
+ Y + DD+ L F +G L Y +K + ++ +++ LEYLH
Sbjct: 92 FVKLYFTFQDDE--KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELY-E 202
IIHRDL NI +N ++ ++I D G A ++ + A++ +GT +Y++PEL E
Sbjct: 150 --GIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTE 206
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV 241
+ + D+++ G C++ + +P + I++K+
Sbjct: 207 KSACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKI 244
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 116/265 (43%), Gaps = 22/265 (8%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV---RLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
LLGSG VY + + VA V R+S + E P R+ EV LL+ + + +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVVLLKKVSSGFS 88
Query: 88 IVCYSV-WLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
V + W + + + + +L + + + + + + QVLE + H H
Sbjct: 89 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR--HCH 146
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
++HRD+ NI I+ N G++K+ D G A++ + GT Y PE Y
Sbjct: 147 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTRVYSPPEWIRYHRY 205
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIE 263
+ ++S G+ L +MV +IP+ + + ++ Q + + E + I
Sbjct: 206 HGRSAAVWSLGILLYDMVCGDIPFEHDEEI----------IRGQVFFRQRVSXECQHLIR 255
Query: 264 KCIA-QPRARPSASELLKDPFFSEL 287
C+A +P RP+ E+ P+ ++
Sbjct: 256 WCLALRPSDRPTFEEIQNHPWMQDV 280
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 24/219 (10%)
Query: 31 LLGSGAVKKVYRAFDQEEG----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
+LGSGA VY+ EG I VA ++R + P + E ++ ++ N +
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNPH 82
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHT 145
+ + L +T+ I ++ G L Y ++H+ ++ + L W Q+ +G+ YL
Sbjct: 83 VCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 139
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---EYMAPE-LY 201
++HRDL N+ + VKI D G A ++G + G ++MA E +
Sbjct: 140 RR--LVHRDLAARNVLVK-TPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 202 EEDYTEMVDIYSFGLCLLEMVTM------EIPYSECDSV 234
YT D++S+G+ + E++T IP SE S+
Sbjct: 197 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 235
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 116/265 (43%), Gaps = 22/265 (8%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV---RLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
LLGSG VY + + VA V R+S + E P R+ EV LL+ + + +
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVVLLKKVSSGFS 121
Query: 88 IVCYSV-WLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
V + W + + + + +L + + + + + + QVLE + H H
Sbjct: 122 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR--HCH 179
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
++HRD+ NI I+ N G++K+ D G A++ + GT Y PE Y
Sbjct: 180 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTRVYSPPEWIRYHRY 238
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIE 263
+ ++S G+ L +MV +IP+ + + ++ Q + + E + I
Sbjct: 239 HGRSAAVWSLGILLYDMVCGDIPFEHDEEI----------IRGQVFFRQRVSXECQHLIR 288
Query: 264 KCIA-QPRARPSASELLKDPFFSEL 287
C+A +P RP+ E+ P+ ++
Sbjct: 289 WCLALRPSDRPTFEEIQNHPWMQDV 313
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 116/265 (43%), Gaps = 22/265 (8%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV---RLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
LLGSG VY + + VA V R+S + E P R+ EV LL+ + + +
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVVLLKKVSSGFS 72
Query: 88 IVCYSV-WLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
V + W + + + + +L + + + + + + QVLE + H H
Sbjct: 73 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR--HCH 130
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
++HRD+ NI I+ N G++K+ D G A++ + GT Y PE Y
Sbjct: 131 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTRVYSPPEWIRYHRY 189
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIE 263
+ ++S G+ L +MV +IP+ + + ++ Q + + E + I
Sbjct: 190 HGRSAAVWSLGILLYDMVCGDIPFEHDEEI----------IRGQVFFRQRVSSECQHLIR 239
Query: 264 KCIA-QPRARPSASELLKDPFFSEL 287
C+A +P RP+ E+ P+ ++
Sbjct: 240 WCLALRPSDRPTFEEIQNHPWMQDV 264
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 5/129 (3%)
Query: 102 LNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIF 161
L F+ E G+L + ++ R + + + +S ++ L YL HE II+RDL N+
Sbjct: 85 LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL--HERGIIYRDLKLDNVL 142
Query: 162 INGNIGQVKIGDLGFAAIVGRSHAAHSII-GTPEYMAPELYE-EDYTEMVDIYSFGLCLL 219
++ G +K+ D G R S GTP Y+APE+ EDY VD ++ G+ +
Sbjct: 143 LDSE-GHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMF 201
Query: 220 EMVTMEIPY 228
EM+ P+
Sbjct: 202 EMMAGRSPF 210
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 134 KQVLEGLEYLHTHEPCIIHRDLNCSNIFING--NIGQVKIGDLGFAAIVGRSHAAHSIIG 191
KQ+LEG+ YLH + I+H DL NI ++ +G +KI D G + +G + I+G
Sbjct: 138 KQILEGVYYLHQNN--IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMG 195
Query: 192 TPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPY 228
TPEY+APE+ D T D+++ G+ ++T P+
Sbjct: 196 TPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPF 233
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 22/265 (8%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV---RLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
LLGSG VY + + VA V R+S + E P R+ EV LL+ + + +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVVLLKKVSSGFS 102
Query: 88 IVCYSV-WLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
V + W + + + + +L + + + + + + QVLE + H H
Sbjct: 103 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR--HCH 160
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
++HRD+ NI I+ N G++K+ D G A++ + GT Y PE Y
Sbjct: 161 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTRVYSPPEWIRYHRY 219
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIE 263
+ ++S G+ L +MV +IP+ E D +++ GG Q + + E + I
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPF-EHD------EEIIGG---QVFFRQRVSSECQHLIR 269
Query: 264 KCIA-QPRARPSASELLKDPFFSEL 287
C+A +P RP+ E+ P+ ++
Sbjct: 270 WCLALRPSDRPTFEEIQNHPWMQDV 294
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 5/129 (3%)
Query: 102 LNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIF 161
L F+ E G+L + ++ R + + + +S ++ L YL HE II+RDL N+
Sbjct: 81 LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL--HERGIIYRDLKLDNVL 138
Query: 162 INGNIGQVKIGDLGFAAIVGRSHAAHSII-GTPEYMAPELYE-EDYTEMVDIYSFGLCLL 219
++ G +K+ D G R S GTP Y+APE+ EDY VD ++ G+ +
Sbjct: 139 LDSE-GHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMF 197
Query: 220 EMVTMEIPY 228
EM+ P+
Sbjct: 198 EMMAGRSPF 206
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 101/225 (44%), Gaps = 37/225 (16%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVC 90
L+G G+ VY A+D+ VA +V + ED + R+ E+ +L LK+ YII
Sbjct: 35 LIGRGSYGYVYLAYDKNANKNVAIKKV--NRMFEDLIDCKRILREITILNRLKSDYIIRL 92
Query: 91 YSVWLDD---QHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHE 147
+ + + + + + L + E+ S +L+ K ++ + +K +L G +++H E
Sbjct: 93 HDLIIPEDLLKFDELYIVLEIADS-DLKKLFKTPIFLTEQHVKTILYNLLLGEKFIH--E 149
Query: 148 PCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI------------------ 189
IIHRDL +N +N + VKI D G A + H +
Sbjct: 150 SGIIHRDLKPANCLLNQDCS-VKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKN 208
Query: 190 --------IGTPEYMAPEL--YEEDYTEMVDIYSFGLCLLEMVTM 224
+ T Y APEL +E+YT +DI+S G E++ M
Sbjct: 209 LKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNM 253
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 30/271 (11%)
Query: 28 YSD--LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNK 85
Y+D ++G+G+ VY+A + G VA +V +D NR E+Q++R L +
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNR---ELQIMRKLDHC 73
Query: 86 YII----VCYSVWLDDQHNTLNFITEVCTSGNLRT---YRKKHRHVSIKALKKWSKQVLE 138
I+ YS LN + + R Y + + + + +K + Q+
Sbjct: 74 NIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAP 198
L Y+H+ C HRD+ N+ ++ + +K+ D G A + R S I + Y AP
Sbjct: 134 SLAYIHSFGIC--HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 191
Query: 199 ELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQA---- 249
EL DYT +D++S G L E++ + + S D + +I K + + Q
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 251
Query: 250 --LNKVKDPEVKAFIEKCIAQPRARPSASEL 278
+ K P++KA + +PR P A L
Sbjct: 252 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIAL 282
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 22/265 (8%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV---RLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
LLGSG VY + + VA V R+S + E P R+ EV LL+ + + +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVVLLKKVSSGFS 101
Query: 88 IVCYSV-WLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
V + W + + + + +L + + + + + + QVLE + H H
Sbjct: 102 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR--HCH 159
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
++HRD+ NI I+ N G++K+ D G A++ + GT Y PE Y
Sbjct: 160 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTRVYSPPEWIRYHRY 218
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIE 263
+ ++S G+ L +MV +IP+ E D +++ GG Q + + E + I
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPF-EHD------EEIIGG---QVFFRQRVSSECQHLIR 268
Query: 264 KCIA-QPRARPSASELLKDPFFSEL 287
C+A +P RP+ E+ P+ ++
Sbjct: 269 WCLALRPSDRPTFEEIQNHPWMQDV 293
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 22/265 (8%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV---RLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
LLGSG VY + + VA V R+S + E P R+ EV LL+ + + +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVVLLKKVSSGFS 69
Query: 88 IVCYSV-WLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
V + W + + + + +L + + + + + + QVLE + H H
Sbjct: 70 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR--HCH 127
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
++HRD+ NI I+ N G++K+ D G A++ + GT Y PE Y
Sbjct: 128 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTRVYSPPEWIRYHRY 186
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIE 263
+ ++S G+ L +MV +IP+ E D +++ GG Q + + E + I
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPF-EHD------EEIIGG---QVFFRQRVSSECQHLIR 236
Query: 264 KCIA-QPRARPSASELLKDPFFSEL 287
C+A +P RP+ E+ P+ ++
Sbjct: 237 WCLALRPSDRPTFEEIQNHPWMQDV 261
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 101/219 (46%), Gaps = 11/219 (5%)
Query: 27 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
++ +LG G+ V A + E A + H ++ V + E ++ L + +
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK-VPYVTRERDVMSRLDHPF 93
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
+ Y + DD+ L F +G L Y +K + ++ +++ LEYLH
Sbjct: 94 FVKLYFTFQDDEK--LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELY-E 202
IIHRDL NI +N ++ ++I D G A ++ + A+ +GT +Y++PEL E
Sbjct: 152 --GIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV 241
+ + D+++ G C++ + +P + I+ K+
Sbjct: 209 KSAXKSSDLWALG-CIIYQLVAGLPPFRAGNEGLIFAKI 246
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 116/265 (43%), Gaps = 22/265 (8%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV---RLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
LLGSG VY + + VA V R+S + E P R+ EV LL+ + + +
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVVLLKKVSSGFS 116
Query: 88 IVCYSV-WLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
V + W + + + + +L + + + + + + QVLE + H H
Sbjct: 117 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR--HCH 174
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
++HRD+ NI I+ N G++K+ D G A++ + GT Y PE Y
Sbjct: 175 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTRVYSPPEWIRYHRY 233
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIE 263
+ ++S G+ L +MV +IP+ + + ++ Q + + E + I
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIPFEHDEEI----------IRGQVFFRQRVSXECQHLIR 283
Query: 264 KCIA-QPRARPSASELLKDPFFSEL 287
C+A +P RP+ E+ P+ ++
Sbjct: 284 WCLALRPSDRPTFEEIQNHPWMQDV 308
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V A+D VA +LS ++ R + E+ L++ + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
K II +V+ ++ + + E+ + + + + H + L Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL---LYQMLCGI 139
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE- 199
++LH+ IIHRDL SNI + + +KI D G A G S + T Y APE
Sbjct: 140 KHLHS--AGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 200 LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV--TGGVKPQALNKVKDPE 257
+ Y E VDI+S G + EM+ + + D + + K + G P+ + K++ P
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ-PT 255
Query: 258 VKAFIE 263
V+ ++E
Sbjct: 256 VRTYVE 261
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 22/265 (8%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV---RLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
LLGSG VY + + VA V R+S + E P R+ EV LL+ + + +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVVLLKKVSSGFS 101
Query: 88 IVCYSV-WLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
V + W + + + + +L + + + + + + QVLE + H H
Sbjct: 102 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR--HCH 159
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
++HRD+ NI I+ N G++K+ D G A++ + GT Y PE Y
Sbjct: 160 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTRVYSPPEWIRYHRY 218
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIE 263
+ ++S G+ L +MV +IP+ E D +++ GG Q + + E + I
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPF-EHD------EEIIGG---QVFFRQRVSSECQHLIR 268
Query: 264 KCIA-QPRARPSASELLKDPFFSEL 287
C+A +P RP+ E+ P+ ++
Sbjct: 269 WCLALRPSDRPTFEEIQNHPWMQDV 293
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 116/265 (43%), Gaps = 22/265 (8%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV---RLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
LLGSG VY + + VA V R+S + E P R+ EV LL+ + + +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVVLLKKVSSGFS 101
Query: 88 IVCYSV-WLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
V + W + + + + +L + + + + + + QVLE + H H
Sbjct: 102 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR--HCH 159
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
++HRD+ NI I+ N G++K+ D G A++ + GT Y PE Y
Sbjct: 160 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTRVYSPPEWIRYHRY 218
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIE 263
+ ++S G+ L +MV +IP+ + + ++ Q + + E + I
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPFEHDEEI----------IRGQVFFRQRVSSECQHLIR 268
Query: 264 KCIA-QPRARPSASELLKDPFFSEL 287
C+A +P RP+ E+ P+ ++
Sbjct: 269 WCLALRPSDRPTFEEIQNHPWMQDV 293
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 5/129 (3%)
Query: 102 LNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIF 161
L F+ E G+L + ++ R + + + +S ++ L YL HE II+RDL N+
Sbjct: 96 LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL--HERGIIYRDLKLDNVL 153
Query: 162 INGNIGQVKIGDLGFAAIVGRSHAAHSII-GTPEYMAPELYE-EDYTEMVDIYSFGLCLL 219
++ G +K+ D G R S GTP Y+APE+ EDY VD ++ G+ +
Sbjct: 154 LDSE-GHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMF 212
Query: 220 EMVTMEIPY 228
EM+ P+
Sbjct: 213 EMMAGRSPF 221
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 113 NSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 170
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D G A V GR+ + GTPEY+APE + + Y + VD ++ G+
Sbjct: 171 NLMIDQQ-GYIQVTDFGLAKRVKGRTW---XLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 227 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 253
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 22/265 (8%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV---RLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
LLGSG VY + + VA V R+S + E P R+ EV LL+ + + +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVVLLKKVSSGFS 102
Query: 88 IVCYSV-WLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
V + W + + + + +L + + + + + + QVLE + H H
Sbjct: 103 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR--HCH 160
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
++HRD+ NI I+ N G++K+ D G A++ + GT Y PE Y
Sbjct: 161 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTRVYSPPEWIRYHRY 219
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIE 263
+ ++S G+ L +MV +IP+ E D +++ GG Q + + E + I
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPF-EHD------EEIIGG---QVFFRQRVSXECQHLIR 269
Query: 264 KCIA-QPRARPSASELLKDPFFSEL 287
C+A +P RP+ E+ P+ ++
Sbjct: 270 WCLALRPSDRPTFEEIQNHPWMQDV 294
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 22/265 (8%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV---RLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
LLGSG VY + + VA V R+S + E P R+ EV LL+ + + +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVVLLKKVSSGFS 102
Query: 88 IVCYSV-WLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
V + W + + + + +L + + + + + + QVLE + H H
Sbjct: 103 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR--HCH 160
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
++HRD+ NI I+ N G++K+ D G A++ + GT Y PE Y
Sbjct: 161 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTRVYSPPEWIRYHRY 219
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIE 263
+ ++S G+ L +MV +IP+ E D +++ GG Q + + E + I
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPF-EHD------EEIIGG---QVFFRQRVSSECQHLIR 269
Query: 264 KCIA-QPRARPSASELLKDPFFSEL 287
C+A +P RP+ E+ P+ ++
Sbjct: 270 WCLALRPSDRPTFEEIQNHPWMQDV 294
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 129/298 (43%), Gaps = 48/298 (16%)
Query: 20 DPSGRFGR----YSDLLGSGAVKKVYRA----FDQE---EGIEVAWNQVRLSHFSEDPVL 68
DP F R LG GA +V A D++ E + VA ++ +D
Sbjct: 27 DPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--- 83
Query: 69 VNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR----- 122
++ L SE+++++ + K+K II D L I E + GNLR Y + R
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQD--GPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 123 -----------HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKI 171
++ K L + Q+ G+EYL + + IHRDL N+ + N ++I
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTEN-NVMRI 198
Query: 172 GDLGFAAIVGR-SHAAHSIIGT--PEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTM--- 224
D G A + + + G ++MAPE L++ YT D++SFG+ + E+ T+
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 225 EIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCI-AQPRARPSASELLKD 281
P + + K+ K+ KP E+ + C A P RP+ +L++D
Sbjct: 259 PYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 103/219 (47%), Gaps = 11/219 (5%)
Query: 27 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
++ +LG G+ V A + E A + H ++ V + E ++ L + +
Sbjct: 32 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK-VPYVTRERDVMSRLDHPF 90
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
+ Y + DD+ L F +G L Y +K + ++ +++ LEYLH
Sbjct: 91 FVKLYFTFQDDE--KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPELY-E 202
IIHRDL NI +N ++ ++I D G A ++ + A+S +GT +Y++PEL E
Sbjct: 149 --GIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 205
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV 241
+ + D+++ G C++ + +P + I++K+
Sbjct: 206 KSACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKI 243
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 133/298 (44%), Gaps = 30/298 (10%)
Query: 2 PAANSNMSDRDGEPFVEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSH 61
P++N + D F++V G FG+ LL ++V+ A ++V + L
Sbjct: 29 PSSNPHAKPSDFH-FLKVIGKGSFGKV--LLARHKAEEVFYA------VKVLQKKAILKK 79
Query: 62 FSEDPVLVNRLHSEVQLLRTLKNKYII-VCYSVWLDDQHNTLNFITEVCTSGNLRTYRKK 120
E ++ R LL+ +K+ +++ + +S D+ L F+ + G L + ++
Sbjct: 80 KEEKHIMSER----NVLLKNVKHPFLVGLHFSFQTADK---LYFVLDYINGGELFYHLQR 132
Query: 121 HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA-I 179
R + ++ ++ L YLH+ I++RDL NI ++ G + + D G
Sbjct: 133 ERCFLEPRARFYAAEIASALGYLHSLN--IVYRDLKPENILLDSQ-GHIVLTDFGLCKEN 189
Query: 180 VGRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIY 238
+ + + GTPEY+APE L+++ Y VD + G L EM+ P+ ++ A++Y
Sbjct: 190 IEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-AEMY 248
Query: 239 KKVTGGVKPQALNKVKDPEVKAFIEKCIAQPR-----ARPSASELLKDPFFSELNDDD 291
+ KP L + +E + + R A+ E+ FFS +N DD
Sbjct: 249 DNILN--KPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDD 304
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 24/200 (12%)
Query: 102 LNFITEVCTSGNLRTYRKKHRH----------------VSIKALKKWSKQVLEGLEYLHT 145
L ITE C GNL TY + R+ ++++ L +S QV +G+E+L +
Sbjct: 98 LMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 157
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR--SHAAHSIIGTP-EYMAPE-LY 201
+ IHRDL NI ++ VKI D G A + + + P ++MAPE ++
Sbjct: 158 RK--CIHRDLAARNILLSEK-NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF 214
Query: 202 EEDYTEMVDIYSFGLCLLEMVTMEI-PYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKA 260
+ YT D++SFG+ L E+ ++ PY + +++ G + +A + +
Sbjct: 215 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT 274
Query: 261 FIEKCIAQPRARPSASELLK 280
++ +P RP+ SEL++
Sbjct: 275 MLDCWHGEPSQRPTFSELVE 294
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 24/200 (12%)
Query: 102 LNFITEVCTSGNLRTYRKKHRH----------------VSIKALKKWSKQVLEGLEYLHT 145
L ITE C GNL TY + R+ ++++ L +S QV +G+E+L +
Sbjct: 98 LMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 157
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR--SHAAHSIIGTP-EYMAPE-LY 201
+ IHRDL NI ++ VKI D G A + + + P ++MAPE ++
Sbjct: 158 RK--CIHRDLAARNILLSEK-NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF 214
Query: 202 EEDYTEMVDIYSFGLCLLEMVTMEI-PYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKA 260
+ YT D++SFG+ L E+ ++ PY + +++ G + +A + +
Sbjct: 215 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT 274
Query: 261 FIEKCIAQPRARPSASELLK 280
++ +P RP+ SEL++
Sbjct: 275 MLDCWHGEPSQRPTFSELVE 294
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 22/265 (8%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV---RLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
LLGSG VY + + VA V R+S + E P R+ EV LL+ + + +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVVLLKKVSSGFS 101
Query: 88 IVCYSV-WLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
V + W + + + + +L + + + + + + QVLE + H H
Sbjct: 102 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR--HCH 159
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
++HRD+ NI I+ N G++K+ D G A++ + GT Y PE Y
Sbjct: 160 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTRVYSPPEWIRYHRY 218
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIE 263
+ ++S G+ L +MV +IP+ E D +++ GG Q + + E + I
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPF-EHD------EEIIGG---QVFFRQRVSXECQHLIR 268
Query: 264 KCIA-QPRARPSASELLKDPFFSEL 287
C+A +P RP+ E+ P+ ++
Sbjct: 269 WCLALRPSDRPTFEEIQNHPWMQDV 293
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 22/265 (8%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV---RLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
LLGSG VY + + VA V R+S + E P R+ EV LL+ + + +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVVLLKKVSSGFS 102
Query: 88 IVCYSV-WLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
V + W + + + + +L + + + + + + QVLE + H H
Sbjct: 103 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR--HCH 160
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
++HRD+ NI I+ N G++K+ D G A++ + GT Y PE Y
Sbjct: 161 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTRVYSPPEWIRYHRY 219
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK-DPEVKAFIE 263
+ ++S G+ L +MV +IP+ E D +++ GG Q + + E + I
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPF-EHD------EEIIGG---QVFFRQRVSXECQHLIR 269
Query: 264 KCIA-QPRARPSASELLKDPFFSEL 287
C+A +P RP+ E+ P+ ++
Sbjct: 270 WCLALRPSDRPTFEEIQNHPWMQDV 294
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 122/277 (44%), Gaps = 34/277 (12%)
Query: 32 LGSGAVKKVYRA----FDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKY 86
LG GA +V A D+++ V V++ ++ L SE+++++ + K+K
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR----------------HVSIKALK 130
II D L I E + GNLR Y + R +S K L
Sbjct: 96 IINLLGACTQD--GPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 131 KWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSII 190
+ QV G+EYL + + IHRDL N+ + + +KI D G A +
Sbjct: 154 SCAYQVARGMEYLASKK--CIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDXXKKTT 210
Query: 191 GTP---EYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGV 245
++MAPE L++ YT D++SFG+ L E+ T+ PY V +++K + G
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEELFKLLKEGH 269
Query: 246 KPQALNKVKDPEVKAFIEKCI-AQPRARPSASELLKD 281
+ + + E+ + C A P RP+ +L++D
Sbjct: 270 RMDKPSNCTN-ELYMMMRDCWHAVPSQRPTFKQLVED 305
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 20/196 (10%)
Query: 102 LNFITEVCTSGNLRTYRKKHRH------------VSIKALKKWSKQVLEGLEYLHTHEPC 149
L I E C GNL TY + R+ ++++ L +S QV +G+E+L + +
Sbjct: 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRK-- 164
Query: 150 IIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS--HAAHSIIGTP-EYMAPE-LYEEDY 205
IHRDL NI ++ VKI D G A + + + P ++MAPE +++ Y
Sbjct: 165 XIHRDLAARNILLSEK-NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 223
Query: 206 TEMVDIYSFGLCLLEMVTMEI-PYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK 264
T D++SFG+ L E+ ++ PY + +++ G + +A + + ++
Sbjct: 224 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDC 283
Query: 265 CIAQPRARPSASELLK 280
+P RP+ SEL++
Sbjct: 284 WHGEPSQRPTFSELVE 299
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V A+D VA +LS ++ R + E+ L++ + +
Sbjct: 27 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 84
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
K II +V+ ++ + + E+ + + + + H + L Q+L G+
Sbjct: 85 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 141
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE- 199
++LH+ IIHRDL SNI + + +KI D G A G S + T Y APE
Sbjct: 142 KHLHS--AGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMVPFVVTRYYRAPEV 198
Query: 200 LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV--TGGVKPQALNKVKDPE 257
+ Y E VDI+S G + EM+ + + D + + K + G P+ + K++ P
Sbjct: 199 ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ-PT 257
Query: 258 VKAFIE 263
V+ ++E
Sbjct: 258 VRTYVE 263
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 107/230 (46%), Gaps = 25/230 (10%)
Query: 74 SEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKK-- 131
+E Q+L + +++++ + + + L + + G+L+ + +
Sbjct: 233 NEKQILEKVNSRFVVSLAYAY--ETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF 290
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIG 191
++ ++ GLE LH I++RDL NI ++ + G ++I DLG A V +G
Sbjct: 291 YAAEICCGLEDLHRER--IVYRDLKPENILLDDH-GHIRISDLGLAVHVPEGQTIKGRVG 347
Query: 192 TPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVTMEIPYSE------CDSVAKIYKKVTGG 244
T YMAPE+ + E YT D ++ G L EM+ + P+ + + V ++ K+V
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV--- 404
Query: 245 VKPQALNKVKDPEVKAFIEKCIAQ-PRAR-----PSASELLKDPFFSELN 288
P+ ++ P+ ++ + + + P R SA E+ + P F +LN
Sbjct: 405 --PEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLN 452
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 128/298 (42%), Gaps = 48/298 (16%)
Query: 20 DPSGRFGR----YSDLLGSGAVKKVYRA----FDQE---EGIEVAWNQVRLSHFSEDPVL 68
DP F R LG G +V A D++ E + VA ++ +D
Sbjct: 14 DPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--- 70
Query: 69 VNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR----- 122
++ L SE+++++ + K+K II D L I E + GNLR Y + R
Sbjct: 71 LSDLVSEMEMMKMIGKHKNIINLLGACTQD--GPLYVIVEYASKGNLREYLRARRPPGME 128
Query: 123 -----------HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKI 171
++ K L + Q+ G+EYL + + IHRDL N+ + N +KI
Sbjct: 129 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLTARNVLVTEN-NVMKI 185
Query: 172 GDLGFAAIVGR-SHAAHSIIGT--PEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTM--- 224
D G A + + + G ++MAPE L++ YT D++SFG+ + E+ T+
Sbjct: 186 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 245
Query: 225 EIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCI-AQPRARPSASELLKD 281
P + + K+ K+ KP E+ + C A P RP+ +L++D
Sbjct: 246 PYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVPSQRPTFKQLVED 299
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 102/219 (46%), Gaps = 11/219 (5%)
Query: 27 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
++ +LG G+ V A + E A + H ++ V + E ++ L + +
Sbjct: 38 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK-VPYVTRERDVMSRLDHPF 96
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
+ Y + DD+ L F +G L Y +K + ++ +++ LEYLH
Sbjct: 97 FVKLYFTFQDDEK--LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 154
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELY-E 202
IIHRDL NI +N ++ ++I D G A ++ + A+ +GT +Y++PEL E
Sbjct: 155 --GIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 211
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV 241
+ + D+++ G C++ + +P + I++K+
Sbjct: 212 KSACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKI 249
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 108/227 (47%), Gaps = 19/227 (8%)
Query: 69 VNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKA 128
+ +++ E+ +L+ L + ++ V D + L + E+ G + + +S
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV-PTLKPLSEDQ 138
Query: 129 LKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS 188
+ + + +++G+EYLH + IIHRD+ SN+ + G G +KI D G + S A S
Sbjct: 139 ARFYFQDLIKGIEYLHYQK--IIHRDIKPSNLLV-GEDGHIKIADFGVSNEFKGSDALLS 195
Query: 189 -IIGTPEYMAPELYEEDYT----EMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTG 243
+GTP +MAPE E + +D+++ G+ L V + P+ + + + ++ K
Sbjct: 196 NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD-ERIMCLHSK--- 251
Query: 244 GVKPQALNKVKDPEVKAFIEKCIAQ-----PRARPSASELLKDPFFS 285
+K QAL P++ ++ I + P +R E+ P+ +
Sbjct: 252 -IKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 102/219 (46%), Gaps = 11/219 (5%)
Query: 27 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
++ +LG G+ V A + E A + H ++ V + E ++ L + +
Sbjct: 36 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK-VPYVTRERDVMSRLDHPF 94
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
+ Y + DD+ L F +G L Y +K + ++ +++ LEYLH
Sbjct: 95 FVKLYFTFQDDEK--LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELY-E 202
IIHRDL NI +N ++ ++I D G A ++ + A+ +GT +Y++PEL E
Sbjct: 153 --GIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 209
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV 241
+ + D+++ G C++ + +P + I++K+
Sbjct: 210 KSACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKI 247
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 102/219 (46%), Gaps = 11/219 (5%)
Query: 27 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
++ +LG G+ V A + E A + H ++ V + E ++ L + +
Sbjct: 13 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK-VPYVTRERDVMSRLDHPF 71
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
+ Y + DD+ L F +G L Y +K + ++ +++ LEYLH
Sbjct: 72 FVKLYFTFQDDEK--LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 129
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELY-E 202
IIHRDL NI +N ++ ++I D G A ++ + A+ +GT +Y++PEL E
Sbjct: 130 --GIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 186
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV 241
+ + D+++ G C++ + +P + I++K+
Sbjct: 187 KSACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKI 224
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 102/219 (46%), Gaps = 11/219 (5%)
Query: 27 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
++ +LG G+ V A + E A + H ++ V + E ++ L + +
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK-VPYVTRERDVMSRLDHPF 93
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
+ Y + DD+ L F +G L Y +K + ++ +++ LEYLH
Sbjct: 94 FVKLYFTFQDDE--KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELY-E 202
IIHRDL NI +N ++ ++I D G A ++ + A+ +GT +Y++PEL E
Sbjct: 152 --GIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV 241
+ + D+++ G C++ + +P + I++K+
Sbjct: 209 KSACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKI 246
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V A+D VA +LS ++ R + E+ L++ + +
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
K II +V+ ++ + + E+ + + + + H + L Q+L G+
Sbjct: 84 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 140
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE- 199
++LH+ IIHRDL SNI + + +KI D G A G S + T Y APE
Sbjct: 141 KHLHS--AGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 197
Query: 200 LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV--TGGVKPQALNKVKDPE 257
+ Y E VDI+S G + EM+ + + D + + K + G P+ + K++ P
Sbjct: 198 ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ-PT 256
Query: 258 VKAFIE 263
V+ ++E
Sbjct: 257 VRTYVE 262
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 107/230 (46%), Gaps = 25/230 (10%)
Query: 74 SEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKK-- 131
+E Q+L + +++++ + + + L + + G+L+ + +
Sbjct: 233 NEKQILEKVNSRFVVSLAYAY--ETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF 290
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIG 191
++ ++ GLE LH I++RDL NI ++ + G ++I DLG A V +G
Sbjct: 291 YAAEICCGLEDLHRER--IVYRDLKPENILLDDH-GHIRISDLGLAVHVPEGQTIKGRVG 347
Query: 192 TPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVTMEIPYSE------CDSVAKIYKKVTGG 244
T YMAPE+ + E YT D ++ G L EM+ + P+ + + V ++ K+V
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV--- 404
Query: 245 VKPQALNKVKDPEVKAFIEKCIAQ-PRAR-----PSASELLKDPFFSELN 288
P+ ++ P+ ++ + + + P R SA E+ + P F +LN
Sbjct: 405 --PEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLN 452
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 99 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++ L + E G + ++ ++ S + ++ Q++ EYLH+ + +I+RDL
Sbjct: 113 NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 170
Query: 159 NIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ I+ G +++ D GFA V GR+ + GTPE +APE + + Y + VD ++ G+
Sbjct: 171 NLLIDQQ-GYIQVTDFGFAKRVKGRTW---XLCGTPEALAPEIILSKGYNKAVDWWALGV 226
Query: 217 CLLEMVTMEIPYSECDSVAKIYKKVTGG 244
+ EM P+ D +IY+K+ G
Sbjct: 227 LIYEMAAGYPPFF-ADQPIQIYEKIVSG 253
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 101/219 (46%), Gaps = 11/219 (5%)
Query: 27 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
++ +LG G+ V A + E A + H ++ V + E ++ L + +
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK-VPYVTRERDVMSRLDHPF 93
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
+ Y + DD+ L F +G L Y +K + ++ +++ LEYLH
Sbjct: 94 FVKLYFTFQDDEK--LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELY-E 202
IIHRDL NI +N ++ ++I D G A ++ + A+ +GT +Y++PEL E
Sbjct: 152 --GIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV 241
+ + D+++ G C++ + +P + I+ K+
Sbjct: 209 KSACKSSDLWALG-CIIYQLVAGLPPFRAGNEGLIFAKI 246
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 102/219 (46%), Gaps = 11/219 (5%)
Query: 27 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
++ +LG G+ V A + E A + H ++ V + E ++ L + +
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK-VPYVTRERDVMSRLDHPF 91
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
+ Y + DD+ L F +G L Y +K + ++ +++ LEYLH
Sbjct: 92 FVKLYFTFQDDE--KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELY-E 202
IIHRDL NI +N ++ ++I D G A ++ + A+ +GT +Y++PEL E
Sbjct: 150 --GIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV 241
+ + D+++ G C++ + +P + I++K+
Sbjct: 207 KSACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKI 244
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 22/198 (11%)
Query: 102 LNFITEVCTSGNLRTYRKKHRH--------------VSIKALKKWSKQVLEGLEYLHTHE 147
L I E C GNL TY + R+ ++++ L +S QV +G+E+L + +
Sbjct: 109 LMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRK 168
Query: 148 PCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS--HAAHSIIGTP-EYMAPE-LYEE 203
IHRDL NI ++ VKI D G A + + P ++MAPE +++
Sbjct: 169 --XIHRDLAARNILLSEK-NVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDR 225
Query: 204 DYTEMVDIYSFGLCLLEMVTMEI-PYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFI 262
YT D++SFG+ L E+ ++ PY + +++ G + +A + + +
Sbjct: 226 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML 285
Query: 263 EKCIAQPRARPSASELLK 280
+ +P RP+ SEL++
Sbjct: 286 DCWHGEPSQRPTFSELVE 303
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 117/246 (47%), Gaps = 18/246 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V A+D VA +LS ++ R + E+ L++ + +
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
K II +V+ ++ + + E+ + + + + H + L Q+L G+
Sbjct: 77 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 133
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE- 199
++LH+ IIHRDL SNI + + +KI D G A G S + T Y APE
Sbjct: 134 KHLHS--AGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 190
Query: 200 LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV--TGGVKPQALNKVKDPE 257
+ Y E VD++S G + EMV +I + D + + K + G P+ + K++ P
Sbjct: 191 ILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PT 249
Query: 258 VKAFIE 263
V+ ++E
Sbjct: 250 VRTYVE 255
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 117/246 (47%), Gaps = 18/246 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V A+D VA +LS ++ R + E+ L++ + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
K II +V+ ++ + + E+ + + + + H + L Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 139
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE- 199
++LH+ IIHRDL SNI + + +KI D G A G S + T Y APE
Sbjct: 140 KHLHS--AGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMEPEVVTRYYRAPEV 196
Query: 200 LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV--TGGVKPQALNKVKDPE 257
+ Y E VD++S G + EMV +I + D + + K + G P+ + K++ P
Sbjct: 197 ILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PT 255
Query: 258 VKAFIE 263
V+ ++E
Sbjct: 256 VRTYVE 261
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 102/219 (46%), Gaps = 11/219 (5%)
Query: 27 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
++ +LG G+ V A + E A + H ++ V + E ++ L + +
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK-VPYVTRERDVMSRLDHPF 93
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
+ Y + DD+ L F +G L Y +K + ++ +++ LEYLH
Sbjct: 94 FVKLYFTFQDDE--KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELY-E 202
IIHRDL NI +N ++ ++I D G A ++ + A+ +GT +Y++PEL E
Sbjct: 152 --GIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV 241
+ + D+++ G C++ + +P + I++K+
Sbjct: 209 KSACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKI 246
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 102/219 (46%), Gaps = 11/219 (5%)
Query: 27 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
++ +LG G+ V A + E A + H ++ V + E ++ L + +
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK-VPYVTRERDVMSRLDHPF 91
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
+ Y + DD+ L F +G L Y +K + ++ +++ LEYLH
Sbjct: 92 FVKLYFTFQDDE--KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELY-E 202
IIHRDL NI +N ++ ++I D G A ++ + A+ +GT +Y++PEL E
Sbjct: 150 --GIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV 241
+ + D+++ G C++ + +P + I++K+
Sbjct: 207 KSACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKI 244
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 102/219 (46%), Gaps = 11/219 (5%)
Query: 27 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
++ +LG G+ V A + E A + H ++ V + E ++ L + +
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK-VPYVTRERDVMSRLDHPF 93
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
+ Y + DD+ L F +G L Y +K + ++ +++ LEYLH
Sbjct: 94 FVKLYFTFQDDE--KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELY-E 202
IIHRDL NI +N ++ ++I D G A ++ + A+ +GT +Y++PEL E
Sbjct: 152 --GIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV 241
+ + D+++ G C++ + +P + I++K+
Sbjct: 209 KSACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKI 246
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 118/271 (43%), Gaps = 30/271 (11%)
Query: 28 YSD--LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNK 85
Y+D ++G+G+ VY+A + G VA +V + NR E+Q++R L +
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QGKAFKNR---ELQIMRKLDHC 73
Query: 86 YII----VCYSVWLDDQHNTLNFITEVCTSGNLRT---YRKKHRHVSIKALKKWSKQVLE 138
I+ YS LN + + R Y + + + + +K + Q+
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAP 198
L Y+H+ C HRD+ N+ ++ + +K+ D G A + R S I + Y AP
Sbjct: 134 SLAYIHSFGIC--HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 191
Query: 199 ELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQA---- 249
EL DYT +D++S G L E++ + + S D + +I K + + Q
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 251
Query: 250 --LNKVKDPEVKAFIEKCIAQPRARPSASEL 278
+ K P++KA + +PR P A L
Sbjct: 252 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIAL 282
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 24/200 (12%)
Query: 102 LNFITEVCTSGNLRTYRKKHRH----------------VSIKALKKWSKQVLEGLEYLHT 145
L ITE C GNL TY + R+ ++++ L +S QV +G+E+L +
Sbjct: 98 LMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 157
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR--SHAAHSIIGTP-EYMAPE-LY 201
+ IHRDL NI ++ VKI D G A + + P ++MAPE ++
Sbjct: 158 RK--CIHRDLAARNILLSEK-NVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIF 214
Query: 202 EEDYTEMVDIYSFGLCLLEMVTMEI-PYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKA 260
+ YT D++SFG+ L E+ ++ PY + +++ G + +A + +
Sbjct: 215 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT 274
Query: 261 FIEKCIAQPRARPSASELLK 280
++ +P RP+ SEL++
Sbjct: 275 MLDCWHGEPSQRPTFSELVE 294
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V A+D VA +LS ++ R + E+ L++ + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
K II +V+ ++ + + E+ + + + + H + L Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 139
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE- 199
++LH+ IIHRDL SNI + + +KI D G A G S + T Y APE
Sbjct: 140 KHLHS--AGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 200 LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV--TGGVKPQALNKVKDPE 257
+ Y E VDI+S G + EM+ + + D + + K + G P+ + K++ P
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ-PT 255
Query: 258 VKAFIE 263
V+ ++E
Sbjct: 256 VRTYVE 261
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 102/219 (46%), Gaps = 11/219 (5%)
Query: 27 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
++ +LG G+ V A + E A + H ++ V + E ++ L + +
Sbjct: 12 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK-VPYVTRERDVMSRLDHPF 70
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
+ Y + DD+ L F +G L Y +K + ++ +++ LEYLH
Sbjct: 71 FVKLYFTFQDDE--KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 128
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELY-E 202
IIHRDL NI +N ++ ++I D G A ++ + A+ +GT +Y++PEL E
Sbjct: 129 --GIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 185
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV 241
+ + D+++ G C++ + +P + I++K+
Sbjct: 186 KSACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKI 223
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 113/245 (46%), Gaps = 16/245 (6%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V A+D VA +LS ++ R + E+ L++ + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
K II +V+ ++ + + E+ + + + + H + L Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 139
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE- 199
++LH+ IIHRDL SNI + + +KI D G A G S + T Y APE
Sbjct: 140 KHLHS--AGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMEPEVVTRYYRAPEV 196
Query: 200 LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTG-GVKPQALNKVKDPEV 258
+ Y E VDI+S G + EMV +I + D + + K + G A K P V
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTV 256
Query: 259 KAFIE 263
+ ++E
Sbjct: 257 RNYVE 261
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 126/268 (47%), Gaps = 27/268 (10%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQV--RLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIV 89
LGSG V + ++ G++ A + R + S V + EV +L+ +++ +I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPC 149
+ V+ + + I E+ G L + + ++ + ++ KQ+L G+ YLH+ +
Sbjct: 79 LHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ-- 134
Query: 150 IIHRDLNCSNI-FINGNIGQ--VKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
I H DL NI ++ N+ + +KI D G A + + +I GTP ++APE+ YE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNYEPL 194
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKI----------YKKVTGGVKPQALN 251
E D++S G+ +++ P+ ++ +++A + Y T + +
Sbjct: 195 GLE-ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIR 253
Query: 252 K--VKDPEVKAFIEKCIAQPRARPSASE 277
+ VKDP+ + I+ + P +P ++
Sbjct: 254 RLLVKDPKKRMTIQDSLQHPWIKPKDTQ 281
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 109/262 (41%), Gaps = 42/262 (16%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVC 90
LLG GA V A + G VA ++ + P+ R E+++L+ K++ II
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPF---DKPLFALRTLREIKILKHFKHENIITI 74
Query: 91 YSVWLDDQHNTLN--FITEVCTSGNLRTYRKKHRHVSIKAL-----KKWSKQVLEGLEYL 143
+++ D N +I + +L HR +S + L + + Q L ++ L
Sbjct: 75 FNIQRPDSFENFNEVYIIQELMQTDL------HRVISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS-----------IIGT 192
H +IHRDL SN+ IN N +K+ D G A I+ S A +S + T
Sbjct: 129 HGSN--VIHRDLKPSNLLINSNC-DLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVAT 185
Query: 193 PEYMAPE--LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQAL 250
Y APE L Y+ +D++S G L E+ + D ++ P +
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245
Query: 251 NKVKDPEVKAFIEKCIAQPRAR 272
N + +CI PRAR
Sbjct: 246 NDL----------RCIESPRAR 257
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA-IVGRSHAAHSII 190
++ Q++ GLE+LH II+RDL N+ ++ + G V+I DLG A +
Sbjct: 294 YTAQIVSGLEHLHQRN--IIYRDLKPENVLLDDD-GNVRISDLGLAVELKAGQTKTKGYA 350
Query: 191 GTPEYMAPELY-EEDYTEMVDIYSFGLCLLEMVTMEIPY 228
GTP +MAPEL E+Y VD ++ G+ L EM+ P+
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 94/194 (48%), Gaps = 12/194 (6%)
Query: 102 LNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIF 161
L I + G+L T K + + +K + ++ GL++LH+ II+RDL NI
Sbjct: 105 LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHS--LGIIYRDLKPENIL 162
Query: 162 INGNIGQVKIGDLGFAA-IVGRSHAAHSIIGTPEYMAPELY-EEDYTEMVDIYSFGLCLL 219
++ G +K+ D G + + A+S GT EYMAPE+ + ++ D +S+G+ +
Sbjct: 163 LDEE-GHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMF 221
Query: 220 EMVTMEIPYSECD---SVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIAQPRAR--PS 274
EM+T +P+ D ++ I K G PQ L+ ++A ++ A
Sbjct: 222 EMLTGSLPFQGKDRKETMTLILKAKLG--MPQFLSTEAQSLLRALFKRNPANRLGSGPDG 279
Query: 275 ASELLKDPFFSELN 288
A E+ + F+S ++
Sbjct: 280 AEEIKRHVFYSTID 293
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 102/219 (46%), Gaps = 11/219 (5%)
Query: 27 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
++ +LG G+ V A + E A + H ++ V + E ++ L + +
Sbjct: 11 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK-VPYVTRERDVMSRLDHPF 69
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
+ Y + DD+ L F +G L Y +K + ++ +++ LEYLH
Sbjct: 70 FVKLYFTFQDDE--KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 127
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELY-E 202
IIHRDL NI +N ++ ++I D G A ++ + A+ +GT +Y++PEL E
Sbjct: 128 --GIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 184
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV 241
+ + D+++ G C++ + +P + I++K+
Sbjct: 185 KSACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKI 222
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 107/254 (42%), Gaps = 11/254 (4%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVC 90
+LG G+ +V D+ G E A + + L EVQLL+ L + I
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ-KTDKESLLREVQLLKQLDHPNIXKL 91
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCI 150
Y + D + L + EV T G L + S + +QVL G+ Y H ++ I
Sbjct: 92 YEFFEDKGYFYL--VGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNK--I 147
Query: 151 IHRDLNCSNIFINGNI--GQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEEDYTEM 208
+HRDL N+ + ++I D G + S IGT Y+APE+ Y E
Sbjct: 148 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTYDEK 207
Query: 209 VDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK--DPEVKAFIEKCI 266
D++S G+ L +++ P++ + I KKV G L + K K I K +
Sbjct: 208 CDVWSTGVILYILLSGCPPFNGANEY-DILKKVEKGKYTFELPQWKKVSESAKDLIRKXL 266
Query: 267 AQ-PRARPSASELL 279
P R SA + L
Sbjct: 267 TYVPSXRISARDAL 280
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA-IVGRSHAAHSII 190
++ Q++ GLE+LH II+RDL N+ ++ + G V+I DLG A +
Sbjct: 294 YTAQIVSGLEHLHQRN--IIYRDLKPENVLLDDD-GNVRISDLGLAVELKAGQTKTKGYA 350
Query: 191 GTPEYMAPELY-EEDYTEMVDIYSFGLCLLEMVTMEIPY 228
GTP +MAPEL E+Y VD ++ G+ L EM+ P+
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA-IVGRSHAAHSII 190
++ Q++ GLE+LH II+RDL N+ ++ + G V+I DLG A +
Sbjct: 294 YTAQIVSGLEHLHQRN--IIYRDLKPENVLLDDD-GNVRISDLGLAVELKAGQTKTKGYA 350
Query: 191 GTPEYMAPELY-EEDYTEMVDIYSFGLCLLEMVTMEIPY 228
GTP +MAPEL E+Y VD ++ G+ L EM+ P+
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 102/219 (46%), Gaps = 11/219 (5%)
Query: 27 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
++ +LG G+ V A + E A + H ++ V + E ++ L + +
Sbjct: 40 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK-VPYVTRERDVMSRLDHPF 98
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
+ Y + DD+ L F +G L Y +K + ++ +++ LEYLH
Sbjct: 99 FVKLYFCFQDDE--KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 156
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELY-E 202
IIHRDL NI +N ++ ++I D G A ++ + A+ +GT +Y++PEL E
Sbjct: 157 --GIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 213
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV 241
+ + D+++ G C++ + +P + I++K+
Sbjct: 214 KSACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKI 251
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 102/219 (46%), Gaps = 11/219 (5%)
Query: 27 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
++ +LG G+ V A + E A + H ++ V + E ++ L + +
Sbjct: 10 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK-VPYVTRERDVMSRLDHPF 68
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
+ Y + DD+ L F +G L Y +K + ++ +++ LEYLH
Sbjct: 69 FVKLYFTFQDDEK--LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 126
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELY-E 202
IIHRDL NI +N ++ ++I D G A ++ + A+ +GT +Y++PEL E
Sbjct: 127 --GIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 183
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV 241
+ + D+++ G C++ + +P + I++K+
Sbjct: 184 KSACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKI 221
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA-IVGRSHAAHSII 190
++ Q++ GLE+LH II+RDL N+ ++ + G V+I DLG A +
Sbjct: 294 YTAQIVSGLEHLHQRN--IIYRDLKPENVLLDDD-GNVRISDLGLAVELKAGQTKTKGYA 350
Query: 191 GTPEYMAPELY-EEDYTEMVDIYSFGLCLLEMVTMEIPY 228
GTP +MAPEL E+Y VD ++ G+ L EM+ P+
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY +L +GSGA V A+D VA +LS ++ R + E+ L++ + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
K II +V+ ++ + + E+ + + + + H + L Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 139
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE- 199
++LH+ IIHRDL SNI + + +KI D G A G S + T Y APE
Sbjct: 140 KHLHS--AGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPEVVTRYYRAPEV 196
Query: 200 LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV--TGGVKPQALNKVKDPE 257
+ Y E VDI+S G + EM+ + + D + + K + G P+ + K++ P
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ-PT 255
Query: 258 VKAFIE 263
V+ ++E
Sbjct: 256 VRTYVE 261
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 100/219 (45%), Gaps = 24/219 (10%)
Query: 31 LLGSGAVKKVYRAFDQEEG----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
+L SGA VY+ EG I VA ++R + P + E ++ ++ N +
Sbjct: 29 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNPH 85
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHT 145
+ + L +T+ I ++ G L Y ++H+ ++ + L W Q+ +G+ YL
Sbjct: 86 VCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---EYMAPE-LY 201
++HRDL N+ + VKI D G A ++G + G ++MA E +
Sbjct: 143 RR--LVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 202 EEDYTEMVDIYSFGLCLLEMVTM------EIPYSECDSV 234
YT D++S+G+ + E++T IP SE S+
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 238
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 128/298 (42%), Gaps = 48/298 (16%)
Query: 20 DPSGRFGR----YSDLLGSGAVKKVYRA----FDQE---EGIEVAWNQVRLSHFSEDPVL 68
DP F R LG G +V A D++ E + VA ++ +D
Sbjct: 16 DPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--- 72
Query: 69 VNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR----- 122
++ L SE+++++ + K+K II D L I E + GNLR Y + R
Sbjct: 73 LSDLVSEMEMMKMIGKHKNIINLLGACTQD--GPLYVIVEYASKGNLREYLRARRPPGME 130
Query: 123 -----------HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKI 171
++ K L + Q+ G+EYL + + IHRDL N+ + N +KI
Sbjct: 131 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTEN-NVMKI 187
Query: 172 GDLGFAAIVGR-SHAAHSIIGT--PEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTM--- 224
D G A + + + G ++MAPE L++ YT D++SFG+ + E+ T+
Sbjct: 188 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 247
Query: 225 EIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCI-AQPRARPSASELLKD 281
P + + K+ K+ KP E+ + C A P RP+ +L++D
Sbjct: 248 PYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVPSQRPTFKQLVED 301
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 128/298 (42%), Gaps = 48/298 (16%)
Query: 20 DPSGRFGR----YSDLLGSGAVKKVYRA----FDQE---EGIEVAWNQVRLSHFSEDPVL 68
DP F R LG G +V A D++ E + VA ++ +D
Sbjct: 73 DPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--- 129
Query: 69 VNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR----- 122
++ L SE+++++ + K+K II D L I E + GNLR Y + R
Sbjct: 130 LSDLVSEMEMMKMIGKHKNIINLLGACTQD--GPLYVIVEYASKGNLREYLRARRPPGME 187
Query: 123 -----------HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKI 171
++ K L + Q+ G+EYL + + IHRDL N+ + N +KI
Sbjct: 188 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTEN-NVMKI 244
Query: 172 GDLGFAAIVGR-SHAAHSIIGT--PEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTM--- 224
D G A + + + G ++MAPE L++ YT D++SFG+ + E+ T+
Sbjct: 245 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 304
Query: 225 EIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCI-AQPRARPSASELLKD 281
P + + K+ K+ KP E+ + C A P RP+ +L++D
Sbjct: 305 PYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVPSQRPTFKQLVED 358
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 22/163 (13%)
Query: 139 GLEYLHTH-EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS--HAAHSIIGTPEY 195
GL YLH H +P IIHRD+ +NI ++ V +GD G A ++ H ++ G +
Sbjct: 143 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDXHVXXAVRGXIGH 201
Query: 196 MAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSEC----DSVAKIYKKVTGGVKPQAL 250
+APE L +E D++ +G+ LLE++T + + D + V G +K + L
Sbjct: 202 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 261
Query: 251 NKV---------KDPEVKAFIEKCI----AQPRARPSASELLK 280
+ KD EV+ I+ + + P RP SE+++
Sbjct: 262 EALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVR 304
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 128/298 (42%), Gaps = 48/298 (16%)
Query: 20 DPSGRFGR----YSDLLGSGAVKKVYRA----FDQE---EGIEVAWNQVRLSHFSEDPVL 68
DP F R LG G +V A D++ E + VA ++ +D
Sbjct: 19 DPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--- 75
Query: 69 VNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR----- 122
++ L SE+++++ + K+K II D L I E + GNLR Y + R
Sbjct: 76 LSDLVSEMEMMKMIGKHKNIINLLGACTQD--GPLYVIVEYASKGNLREYLRARRPPGME 133
Query: 123 -----------HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKI 171
++ K L + Q+ G+EYL + + IHRDL N+ + N +KI
Sbjct: 134 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTEN-NVMKI 190
Query: 172 GDLGFAAIVGR-SHAAHSIIGT--PEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTM--- 224
D G A + + + G ++MAPE L++ YT D++SFG+ + E+ T+
Sbjct: 191 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 250
Query: 225 EIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCI-AQPRARPSASELLKD 281
P + + K+ K+ KP E+ + C A P RP+ +L++D
Sbjct: 251 PYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVPSQRPTFKQLVED 304
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 125/277 (45%), Gaps = 34/277 (12%)
Query: 32 LGSGAVKKVYRA----FDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKY 86
LG GA +V A D+++ V V++ ++ L SE+++++ + K+K
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR----------------HVSIKALK 130
II D L I E + GNLR Y + R +S K L
Sbjct: 96 IINLLGACTQD--GPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 131 KWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR-SHAAHSI 189
+ QV G+EYL + + IHRDL N+ + + +KI D G A + + +
Sbjct: 154 SCAYQVARGMEYLASKK--CIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDYYKKTT 210
Query: 190 IGT--PEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGV 245
G ++MAPE L++ YT D++SFG+ L E+ T+ PY V +++K + G
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEELFKLLKEGH 269
Query: 246 KPQALNKVKDPEVKAFIEKCI-AQPRARPSASELLKD 281
+ + + E+ + C A P RP+ +L++D
Sbjct: 270 RMDKPSNCTN-ELYMMMRDCWHAVPSQRPTFKQLVED 305
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 124/282 (43%), Gaps = 29/282 (10%)
Query: 17 VEVDPSGRFGRYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNR--L 72
VEV + Y L LGSGA V+R +E A +V ++ F P +++ +
Sbjct: 42 VEVKQGSVYDYYDILEELGSGAFGVVHRC------VEKATGRVFVAKFINTPYPLDKYTV 95
Query: 73 HSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNL--RTYRKKHRHVSIKALK 130
+E+ ++ L + +I + + D L I E + G L R + ++ +S +
Sbjct: 96 KNEISIMNQLHHPKLINLHDAFEDKYEMVL--ILEFLSGGELFDRIAAEDYK-MSEAEVI 152
Query: 131 KWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFI-NGNIGQVKIGDLGFAAIVGRSHAAHSI 189
+ +Q EGL+++H H I+H D+ NI VKI D G A +
Sbjct: 153 NYMRQACEGLKHMHEH--SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVT 210
Query: 190 IGTPEYMAPELYEED----YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKI--YKKVTG 243
T E+ APE+ + + YT+M I G LL ++ P++ D + + K+
Sbjct: 211 TATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLS---PFAGEDDLETLQNVKRCDW 267
Query: 244 GVKPQALNKVKDPEVKAFIEKCI-AQPRARPSASELLKDPFF 284
A + V PE K FI+ + +PR R + + L+ P+
Sbjct: 268 EFDEDAFSSV-SPEAKDFIKNLLQKEPRKRLTVHDALEHPWL 308
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 109/262 (41%), Gaps = 42/262 (16%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVC 90
LLG GA V A + G VA ++ + P+ R E+++L+ K++ II
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPF---DKPLFALRTLREIKILKHFKHENIITI 74
Query: 91 YSVWLDDQHNTLN--FITEVCTSGNLRTYRKKHRHVSIKAL-----KKWSKQVLEGLEYL 143
+++ D N +I + +L HR +S + L + + Q L ++ L
Sbjct: 75 FNIQRPDSFENFNEVYIIQELMQTDL------HRVISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS-----------IIGT 192
H +IHRDL SN+ IN N +K+ D G A I+ S A +S + T
Sbjct: 129 HGSN--VIHRDLKPSNLLINSNC-DLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVAT 185
Query: 193 PEYMAPE--LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQAL 250
Y APE L Y+ +D++S G L E+ + D ++ P +
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245
Query: 251 NKVKDPEVKAFIEKCIAQPRAR 272
N + +CI PRAR
Sbjct: 246 NDL----------RCIESPRAR 257
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 125/277 (45%), Gaps = 34/277 (12%)
Query: 32 LGSGAVKKVYRA----FDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKY 86
LG GA +V A D+++ V V++ ++ L SE+++++ + K+K
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR----------------HVSIKALK 130
II D L I E + GNLR Y + R +S K L
Sbjct: 88 IINLLGACTQD--GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 131 KWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR-SHAAHSI 189
+ QV G+EYL + + IHRDL N+ + + +KI D G A + + +
Sbjct: 146 SCAYQVARGMEYLASKK--CIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDYYKKTT 202
Query: 190 IGT--PEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGV 245
G ++MAPE L++ YT D++SFG+ L E+ T+ PY V +++K + G
Sbjct: 203 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEELFKLLKEGH 261
Query: 246 KPQALNKVKDPEVKAFIEKCI-AQPRARPSASELLKD 281
+ + + E+ + C A P RP+ +L++D
Sbjct: 262 RMDKPSNCTN-ELYMMMRDCWHAVPSQRPTFKQLVED 297
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 12/204 (5%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNR--LHSEVQLLRTLKNKYIIV 89
LGSG V + + G E A ++ V+R + EV +LR +++ II
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPC 149
+ ++ + + I E+ + G L + + ++ ++ KQ+L+G+ YLH+
Sbjct: 94 LHDIF--ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKR-- 149
Query: 150 IIHRDLNCSNI-FINGNIG--QVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPEL--YEED 204
I H DL NI ++ N+ ++K+ D G A + + +I GTPE++APE+ YE
Sbjct: 150 IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPL 209
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPY 228
E D++S G+ +++ P+
Sbjct: 210 GLE-ADMWSIGVITYILLSGASPF 232
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 125/277 (45%), Gaps = 34/277 (12%)
Query: 32 LGSGAVKKVYRA----FDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKY 86
LG GA +V A D+++ V V++ ++ L SE+++++ + K+K
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR----------------HVSIKALK 130
II D L I E + GNLR Y + R +S K L
Sbjct: 85 IINLLGACTQD--GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 131 KWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR-SHAAHSI 189
+ QV G+EYL + + IHRDL N+ + + +KI D G A + + +
Sbjct: 143 SCAYQVARGMEYLASKK--CIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDYYKKTT 199
Query: 190 IGT--PEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGV 245
G ++MAPE L++ YT D++SFG+ L E+ T+ PY V +++K + G
Sbjct: 200 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEELFKLLKEGH 258
Query: 246 KPQALNKVKDPEVKAFIEKCI-AQPRARPSASELLKD 281
+ + + E+ + C A P RP+ +L++D
Sbjct: 259 RMDKPSNCTN-ELYMMMRDCWHAVPSQRPTFKQLVED 294
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 102/219 (46%), Gaps = 11/219 (5%)
Query: 27 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
++ +LG G+ V A + E A + H ++ V + E ++ L + +
Sbjct: 17 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK-VPYVTRERDVMSRLDHPF 75
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
+ Y + DD+ L F +G L Y +K + ++ +++ LEYLH
Sbjct: 76 FVKLYFTFQDDE--KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 133
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELY-E 202
IIHRDL NI +N ++ ++I D G A ++ + A+ +GT +Y++PEL E
Sbjct: 134 --GIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 190
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV 241
+ + D+++ G C++ + +P + I++K+
Sbjct: 191 KSACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKI 228
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 125/277 (45%), Gaps = 34/277 (12%)
Query: 32 LGSGAVKKVYRA----FDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKY 86
LG GA +V A D+++ V V++ ++ L SE+++++ + K+K
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR----------------HVSIKALK 130
II D L I E + GNLR Y + R +S K L
Sbjct: 81 IINLLGACTQD--GPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 131 KWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR-SHAAHSI 189
+ QV G+EYL + + IHRDL N+ + + +KI D G A + + +
Sbjct: 139 SCAYQVARGMEYLASKK--CIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDYYKKTT 195
Query: 190 IGT--PEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGV 245
G ++MAPE L++ YT D++SFG+ L E+ T+ PY V +++K + G
Sbjct: 196 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEELFKLLKEGH 254
Query: 246 KPQALNKVKDPEVKAFIEKCI-AQPRARPSASELLKD 281
+ + + E+ + C A P RP+ +L++D
Sbjct: 255 RMDKPSNCTN-ELYMMMRDCWHAVPSQRPTFKQLVED 290
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 109/262 (41%), Gaps = 42/262 (16%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVC 90
LLG GA V A + G VA ++ + P+ R E+++L+ K++ II
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPF---DKPLFALRTLREIKILKHFKHENIITI 74
Query: 91 YSVWLDDQHNTLN--FITEVCTSGNLRTYRKKHRHVSIKAL-----KKWSKQVLEGLEYL 143
+++ D N +I + +L HR +S + L + + Q L ++ L
Sbjct: 75 FNIQRPDSFENFNEVYIIQELMQTDL------HRVISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS-----------IIGT 192
H +IHRDL SN+ IN N +K+ D G A I+ S A +S + T
Sbjct: 129 HGSN--VIHRDLKPSNLLINSNC-DLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVAT 185
Query: 193 PEYMAPE--LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQAL 250
Y APE L Y+ +D++S G L E+ + D ++ P +
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245
Query: 251 NKVKDPEVKAFIEKCIAQPRAR 272
N + +CI PRAR
Sbjct: 246 NDL----------RCIESPRAR 257
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 127/299 (42%), Gaps = 49/299 (16%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYII-- 88
++G+G+ V++A E EVA +V +D NR E+Q++R +K+ ++
Sbjct: 47 VIGNGSFGVVFQA-KLVESDEVAIKKVL-----QDKRFKNR---ELQIMRIVKHPNVVDL 97
Query: 89 --VCYSVWLDDQHNTLNFITEVCTSGNLRT---YRKKHRHVSIKALKKWSKQVLEGLEYL 143
YS LN + E R Y K + + + +K + Q+L L Y+
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYI 157
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELY-- 201
H+ C HRD+ N+ ++ G +K+ D G A I+ S I + Y APEL
Sbjct: 158 HSIGIC--HRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFG 215
Query: 202 EEDYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGG-------------- 244
+YT +DI+S G + E++ + + S D + +I KV G
Sbjct: 216 ATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEII-KVLGTPSREQIKTMNPNYM 274
Query: 245 ------VKPQALNKVKDPEVKAFIEKCIAQ-----PRARPSASELLKDPFFSELNDDDS 292
++P +KV P I++ P AR +A E L PFF EL ++
Sbjct: 275 EHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTGEA 333
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 125/277 (45%), Gaps = 34/277 (12%)
Query: 32 LGSGAVKKVYRA----FDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKY 86
LG GA +V A D+++ V V++ ++ L SE+++++ + K+K
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR----------------HVSIKALK 130
II D L I E + GNLR Y + R +S K L
Sbjct: 89 IINLLGACTQD--GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 131 KWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR-SHAAHSI 189
+ QV G+EYL + + IHRDL N+ + + +KI D G A + + +
Sbjct: 147 SCAYQVARGMEYLASKK--CIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDYYKKTT 203
Query: 190 IGT--PEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGV 245
G ++MAPE L++ YT D++SFG+ L E+ T+ PY V +++K + G
Sbjct: 204 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEELFKLLKEGH 262
Query: 246 KPQALNKVKDPEVKAFIEKCI-AQPRARPSASELLKD 281
+ + + E+ + C A P RP+ +L++D
Sbjct: 263 RMDKPSNCTN-ELYMMMRDCWHAVPSQRPTFKQLVED 298
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 125/277 (45%), Gaps = 34/277 (12%)
Query: 32 LGSGAVKKVYRA----FDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKY 86
LG GA +V A D+++ V V++ ++ L SE+++++ + K+K
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR----------------HVSIKALK 130
II D L I E + GNLR Y + R +S K L
Sbjct: 96 IINLLGACTQD--GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 131 KWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR-SHAAHSI 189
+ QV G+EYL + + IHRDL N+ + + +KI D G A + + +
Sbjct: 154 SCAYQVARGMEYLASKK--CIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDYYKKTT 210
Query: 190 IGT--PEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGV 245
G ++MAPE L++ YT D++SFG+ L E+ T+ PY V +++K + G
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEELFKLLKEGH 269
Query: 246 KPQALNKVKDPEVKAFIEKCI-AQPRARPSASELLKD 281
+ + + E+ + C A P RP+ +L++D
Sbjct: 270 RMDKPSNCTN-ELYMMMRDCWHAVPSQRPTFKQLVED 305
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 125/277 (45%), Gaps = 34/277 (12%)
Query: 32 LGSGAVKKVYRA----FDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKY 86
LG GA +V A D+++ V V++ ++ L SE+++++ + K+K
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR----------------HVSIKALK 130
II D L I E + GNLR Y + R +S K L
Sbjct: 137 IINLLGACTQD--GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 131 KWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR-SHAAHSI 189
+ QV G+EYL + + IHRDL N+ + + +KI D G A + + +
Sbjct: 195 SCAYQVARGMEYLASKK--CIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDYYKKTT 251
Query: 190 IGT--PEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGV 245
G ++MAPE L++ YT D++SFG+ L E+ T+ PY V +++K + G
Sbjct: 252 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEELFKLLKEGH 310
Query: 246 KPQALNKVKDPEVKAFIEKCI-AQPRARPSASELLKD 281
+ + + E+ + C A P RP+ +L++D
Sbjct: 311 RMDKPSNCTN-ELYMMMRDCWHAVPSQRPTFKQLVED 346
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 128/298 (42%), Gaps = 48/298 (16%)
Query: 20 DPSGRFGR----YSDLLGSGAVKKVYRA----FDQE---EGIEVAWNQVRLSHFSEDPVL 68
DP F R LG GA +V A D++ E + VA ++ +D
Sbjct: 27 DPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--- 83
Query: 69 VNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR----- 122
++ L SE+++++ + K+K II D L I + GNLR Y + R
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQD--GPLYVIVAYASKGNLREYLRARRPPGME 141
Query: 123 -----------HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKI 171
++ K L + Q+ G+EYL + + IHRDL N+ + N +KI
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTEN-NVMKI 198
Query: 172 GDLGFAAIVGR-SHAAHSIIGT--PEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTM--- 224
D G A + + + G ++MAPE L++ YT D++SFG+ + E+ T+
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 225 EIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCI-AQPRARPSASELLKD 281
P + + K+ K+ KP E+ + C A P RP+ +L++D
Sbjct: 259 PYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 19/208 (9%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY++L +G GA V A+D + VA ++ S F E R E+++L ++
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPF-EHQTYCQRTLREIKILLRFRH 100
Query: 85 KYIIVCYSVWLD---DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLE 141
+ II + +Q + +T + + + K +H+S + + Q+L GL+
Sbjct: 101 ENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLL--KTQHLSNDHICYFLYQILRGLK 158
Query: 142 YLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI----IGTPEYMA 197
Y+H+ ++HRDL SN+ +N +KI D G A + H + T Y A
Sbjct: 159 YIHSAN--VLHRDLKPSNLLLN-TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 215
Query: 198 PE--LYEEDYTEMVDIYSFGLCLLEMVT 223
PE L + YT+ +DI+S G L EM++
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY++L +G GA V A+D + VA ++ S F E R E+++L ++
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPF-EHQTYCQRTLREIKILLAFRH 82
Query: 85 KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRK-KHRHVSIKALKKWSKQVLEGLEYL 143
+ II + + + V Y+ K +H+S + + Q+L GL+Y+
Sbjct: 83 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 142
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI----IGTPEYMAPE 199
H+ ++HRDL SN+ +N +KI D G A + H + T Y APE
Sbjct: 143 HSAN--VLHRDLKPSNLLLN-TTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 200 --LYEEDYTEMVDIYSFGLCLLEMVT 223
L + YT+ +DI+S G L EM++
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 102/219 (46%), Gaps = 11/219 (5%)
Query: 27 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
++ +LG G+ V A + E A + H ++ V + E ++ L + +
Sbjct: 32 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK-VPYVTRERDVMSRLDHPF 90
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
+ Y + DD+ L F +G L Y +K + ++ +++ LEYLH
Sbjct: 91 FVKLYFTFQDDE--KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELY-E 202
IIHRDL NI +N ++ ++I D G A ++ + A+ +GT +Y++PEL E
Sbjct: 149 --GIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 205
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV 241
+ + D+++ G C++ + +P + I++K+
Sbjct: 206 KSACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKI 243
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 24/200 (12%)
Query: 102 LNFITEVCTSGNLRTYRKKHRH----------------VSIKALKKWSKQVLEGLEYLHT 145
L I E C GNL TY + R+ ++++ L +S QV +G+E+L +
Sbjct: 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 166
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS--HAAHSIIGTP-EYMAPE-LY 201
+ IHRDL NI ++ VKI D G A + + + P ++MAPE ++
Sbjct: 167 RK--CIHRDLAARNILLSEK-NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF 223
Query: 202 EEDYTEMVDIYSFGLCLLEMVTMEI-PYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKA 260
+ YT D++SFG+ L E+ ++ PY + +++ G + +A + +
Sbjct: 224 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT 283
Query: 261 FIEKCIAQPRARPSASELLK 280
++ +P RP+ SEL++
Sbjct: 284 MLDCWHGEPSQRPTFSELVE 303
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 24/200 (12%)
Query: 102 LNFITEVCTSGNLRTYRKKHRH----------------VSIKALKKWSKQVLEGLEYLHT 145
L I E C GNL TY + R+ ++++ L +S QV +G+E+L +
Sbjct: 109 LMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 168
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS--HAAHSIIGTP-EYMAPE-LY 201
+ IHRDL NI ++ VKI D G A + + + P ++MAPE ++
Sbjct: 169 RK--CIHRDLAARNILLSEK-NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF 225
Query: 202 EEDYTEMVDIYSFGLCLLEMVTMEI-PYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKA 260
+ YT D++SFG+ L E+ ++ PY + +++ G + +A + +
Sbjct: 226 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT 285
Query: 261 FIEKCIAQPRARPSASELLK 280
++ +P RP+ SEL++
Sbjct: 286 MLDCWHGEPSQRPTFSELVE 305
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 118/271 (43%), Gaps = 30/271 (11%)
Query: 28 YSD--LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNK 85
Y+D ++G+G+ VY+A + G VA +V + NR E+Q++R L +
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QGKAFKNR---ELQIMRKLDHC 73
Query: 86 YII----VCYSVWLDDQHNTLNFITEVCTSGNLRT---YRKKHRHVSIKALKKWSKQVLE 138
I+ YS LN + + + R Y + + + + +K + Q+
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAP 198
L Y+H+ C HRD+ N+ ++ + +K+ D G A + R S I + Y AP
Sbjct: 134 SLAYIHSFGIC--HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 191
Query: 199 ELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQA---- 249
EL DYT +D++S G L E++ + + S D + +I K + + Q
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 251
Query: 250 --LNKVKDPEVKAFIEKCIAQPRARPSASEL 278
+ P++KA + +PR P A L
Sbjct: 252 PNYTEFAFPQIKAHPWTKVFRPRTPPEAIAL 282
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 94/199 (47%), Gaps = 23/199 (11%)
Query: 102 LNFITEVCTSGNLRTYRKKHRH---------------VSIKALKKWSKQVLEGLEYLHTH 146
L I E C GNL TY + R+ ++++ L +S QV +G+E+L +
Sbjct: 108 LMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASR 167
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS--HAAHSIIGTP-EYMAPE-LYE 202
+ IHRDL NI ++ VKI D G A + + P ++MAPE +++
Sbjct: 168 K--CIHRDLAARNILLSEK-NVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFD 224
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEI-PYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAF 261
YT D++SFG+ L E+ ++ PY + +++ G + +A + +
Sbjct: 225 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTM 284
Query: 262 IEKCIAQPRARPSASELLK 280
++ +P RP+ SEL++
Sbjct: 285 LDCWHGEPSQRPTFSELVE 303
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 24/200 (12%)
Query: 102 LNFITEVCTSGNLRTYRKKHRH----------------VSIKALKKWSKQVLEGLEYLHT 145
L I E C GNL TY + R+ ++++ L +S QV +G+E+L +
Sbjct: 144 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 203
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS--HAAHSIIGTP-EYMAPE-LY 201
+ IHRDL NI ++ VKI D G A + + + P ++MAPE ++
Sbjct: 204 RK--CIHRDLAARNILLSEK-NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF 260
Query: 202 EEDYTEMVDIYSFGLCLLEMVTMEI-PYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKA 260
+ YT D++SFG+ L E+ ++ PY + +++ G + +A + +
Sbjct: 261 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT 320
Query: 261 FIEKCIAQPRARPSASELLK 280
++ +P RP+ SEL++
Sbjct: 321 MLDCWHGEPSQRPTFSELVE 340
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 84/170 (49%), Gaps = 26/170 (15%)
Query: 135 QVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI----- 189
Q+ E +E+LH+ ++HRDL SNIF + VK+GD G + + ++
Sbjct: 172 QIAEAVEFLHSK--GLMHRDLKPSNIFFTMD-DVVKVGDFGLVTAMDQDEEEQTVLTPMP 228
Query: 190 --------IGTPEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKK 240
+GT YM+PE ++ +Y+ VDI+S GL L E++ YS + ++ +
Sbjct: 229 AYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL-----YSFSTQMERV-RI 282
Query: 241 VTG--GVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSEL 287
+T +K L K P+ ++ ++ P RP A++++++ F L
Sbjct: 283 ITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFENL 332
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 122/274 (44%), Gaps = 32/274 (11%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSH-----FSEDPVLVNRLHSEVQLL 79
+YS + LGSGA V+ A D+E+ EV ++ + EDP L ++ E+ +L
Sbjct: 25 KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKL-GKVTLEIAIL 83
Query: 80 RTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSG-NLRTYRKKHRHVSIKALKKWSKQVLE 138
+++ II ++ + + E SG +L + +H + +Q++
Sbjct: 84 SRVEHANIIKVLDIF--ENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVS 141
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAP 198
+ YL + IIHRD+ NI I + +K+ D G AA + R ++ GT EY AP
Sbjct: 142 AVGYLRLKD--IIHRDIKDENIVIAEDF-TIKLIDFGSAAYLERGKLFYTFCGTIEYCAP 198
Query: 199 EL-----YEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKV 253
E+ Y EM +S G+ L +V E P+ E + + V + P L
Sbjct: 199 EVLMGNPYRGPELEM---WSLGVTLYTLVFEENPFCELE------ETVEAAIHPPYL--- 246
Query: 254 KDPEVKAFIEKCIAQ-PRARPSASELLKDPFFSE 286
E+ + + + P R + +L+ DP+ ++
Sbjct: 247 VSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQ 280
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 128/298 (42%), Gaps = 48/298 (16%)
Query: 20 DPSGRFGR----YSDLLGSGAVKKVYRA----FDQE---EGIEVAWNQVRLSHFSEDPVL 68
DP F R LG GA +V A D++ E + VA ++ +D
Sbjct: 27 DPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--- 83
Query: 69 VNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR----- 122
++ L SE+++++ + K+K II D L I + GNLR Y + R
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQD--GPLYVIVGYASKGNLREYLRARRPPGME 141
Query: 123 -----------HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKI 171
++ K L + Q+ G+EYL + + IHRDL N+ + N +KI
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTEN-NVMKI 198
Query: 172 GDLGFAAIVGR-SHAAHSIIGT--PEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTM--- 224
D G A + + + G ++MAPE L++ YT D++SFG+ + E+ T+
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 225 EIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCI-AQPRARPSASELLKD 281
P + + K+ K+ KP E+ + C A P RP+ +L++D
Sbjct: 259 PYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 101/219 (46%), Gaps = 11/219 (5%)
Query: 27 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
++ +LG G+ A + E A + H ++ V + E ++ L + +
Sbjct: 33 KFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENK-VPYVTRERDVMSRLDHPF 91
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
+ Y + DD+ L F +G L Y +K + ++ +++ LEYLH
Sbjct: 92 FVKLYFTFQDDEK--LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 147 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELY-E 202
IIHRDL NI +N ++ ++I D G A ++ + A+ +GT +Y++PEL E
Sbjct: 150 --GIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV 241
+ + D+++ G C++ + +P + I++K+
Sbjct: 207 KSACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKI 244
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 24/200 (12%)
Query: 102 LNFITEVCTSGNLRTYRKKHRH----------------VSIKALKKWSKQVLEGLEYLHT 145
L I E C GNL TY + R+ ++++ L +S QV +G+E+L +
Sbjct: 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 166
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS--HAAHSIIGTP-EYMAPE-LY 201
+ IHRDL NI ++ VKI D G A + + P ++MAPE ++
Sbjct: 167 RK--CIHRDLAARNILLSEK-NVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIF 223
Query: 202 EEDYTEMVDIYSFGLCLLEMVTMEI-PYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKA 260
+ YT D++SFG+ L E+ ++ PY + +++ G + +A + +
Sbjct: 224 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT 283
Query: 261 FIEKCIAQPRARPSASELLK 280
++ +P RP+ SEL++
Sbjct: 284 MLDCWHGEPSQRPTFSELVE 303
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 120/285 (42%), Gaps = 30/285 (10%)
Query: 8 MSDRDGEPFVEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPV 67
M D D FV+ SG FG + L+ K++ E G + N R
Sbjct: 16 MHDSDRYDFVKDIGSGNFG-VARLMRDKLTKELVAVKYIERGAAIDENVQR--------- 65
Query: 68 LVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIK 127
E+ R+L++ I+ V L H L I E + G L S
Sbjct: 66 -------EIINHRSLRHPNIVRFKEVILTPTH--LAIIMEYASGGELYERICNAGRFSED 116
Query: 128 ALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIG-QVKIGDLGFAAIVGRSHAA 186
+ + +Q+L G+ Y H+ + C HRDL N ++G+ ++KI D G++
Sbjct: 117 EARFFFQQLLSGVSYCHSMQIC--HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 174
Query: 187 HSIIGTPEYMAPE--LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTG- 243
S +GTP Y+APE L +E ++ D++S G+ L M+ P+ + + + Y+K
Sbjct: 175 KSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEE-PRDYRKTIQR 233
Query: 244 --GVKPQALNKVK-DPEVKAFIEKC-IAQPRARPSASELLKDPFF 284
VK + ++ PE I + +A P R S E+ +F
Sbjct: 234 ILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWF 278
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 120/268 (44%), Gaps = 16/268 (5%)
Query: 24 RFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK 83
++ + +G+G KV A G VA + + D + R+ +E++ L+ L+
Sbjct: 10 KYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSD---LPRIKTEIEALKNLR 66
Query: 84 NKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYL 143
+++I Y V + N + + E C G L Y +S + + +Q++ + Y+
Sbjct: 67 HQHICQLYHVL--ETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYV 124
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV--GRSHAAHSIIGTPEYMAPELY 201
H+ HRDL N+ + ++K+ D G A + + + G+ Y APEL
Sbjct: 125 HSQG--YAHRDLKPENLLFD-EYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELI 181
Query: 202 E-EDYT-EMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVK 259
+ + Y D++S G+ L ++ +P+ + D+V +YKK+ G + K P
Sbjct: 182 QGKSYLGSEADVWSMGILLYVLMCGFLPFDD-DNVMALYKKIMRG--KYDVPKWLSPSSI 238
Query: 260 AFIEKCI-AQPRARPSASELLKDPFFSE 286
+++ + P+ R S LL P+ +
Sbjct: 239 LLLQQMLQVDPKKRISMKNLLNHPWIMQ 266
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 100/205 (48%), Gaps = 26/205 (12%)
Query: 105 ITEVCTSGNLRTYRKKH----------RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRD 154
ITE C G+L + ++ R + ++ L +S QV +G+ +L + IHRD
Sbjct: 120 ITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN--CIHRD 177
Query: 155 LNCSNIFI-NGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP----EYMAPE-LYEEDYTEM 208
+ N+ + NG++ KIGD G A + + + + + G ++MAPE +++ YT
Sbjct: 178 VAARNVLLTNGHVA--KIGDFGLARDI-MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQ 234
Query: 209 VDIYSFGLCLLEMVTMEI-PYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA 267
D++S+G+ L E+ ++ + PY +K YK V G + A + + ++ C A
Sbjct: 235 SDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQ-MAQPAFAPKNIYSIMQACWA 293
Query: 268 -QPRARPSASELLKDPFFSELNDDD 291
+P RP+ ++ F E +D
Sbjct: 294 LEPTHRPTFQQICS--FLQEQAQED 316
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY++L +G GA V A+D + VA ++ S F E R E+++L ++
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPF-EHQTYCQRTLREIKILLAFRH 82
Query: 85 KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRK-KHRHVSIKALKKWSKQVLEGLEYL 143
+ II + + + V Y+ K +H+S + + Q+L GL+Y+
Sbjct: 83 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 142
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI----IGTPEYMAPE 199
H+ ++HRDL SN+ +N +KI D G A + H + T Y APE
Sbjct: 143 HSAN--VLHRDLKPSNLLLNTTC-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 200 --LYEEDYTEMVDIYSFGLCLLEMVT 223
L + YT+ +DI+S G L EM++
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 100/205 (48%), Gaps = 26/205 (12%)
Query: 105 ITEVCTSGNLRTYRKKH----------RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRD 154
ITE C G+L + ++ R + ++ L +S QV +G+ +L + IHRD
Sbjct: 128 ITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN--CIHRD 185
Query: 155 LNCSNIFI-NGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP----EYMAPE-LYEEDYTEM 208
+ N+ + NG++ KIGD G A + + + + + G ++MAPE +++ YT
Sbjct: 186 VAARNVLLTNGHVA--KIGDFGLARDI-MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQ 242
Query: 209 VDIYSFGLCLLEMVTMEI-PYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA 267
D++S+G+ L E+ ++ + PY +K YK V G + A + + ++ C A
Sbjct: 243 SDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQ-MAQPAFAPKNIYSIMQACWA 301
Query: 268 -QPRARPSASELLKDPFFSELNDDD 291
+P RP+ ++ F E +D
Sbjct: 302 LEPTHRPTFQQICS--FLQEQAQED 324
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 118/273 (43%), Gaps = 18/273 (6%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY L +GSGA V AFD GI VA +LS ++ R + E+ LL+ + +
Sbjct: 25 RYQQLKPIGSGAQGIVCAAFDTVLGINVAVK--KLSRPFQNQTHAKRAYRELVLLKCVNH 82
Query: 85 KYIIVCYSVWLD----DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
K II +V+ ++ + + E+ + + + H + L Q+L G+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYL---LYQMLCGI 139
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE- 199
++LH+ IIHRDL SNI + + +KI D G A + + T Y APE
Sbjct: 140 KHLHS--AGIIHRDLKPSNIVVKSDCT-LKILDFGLARTACTNFMMTPYVVTRYYRAPEV 196
Query: 200 LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQA-LNKVKDPEV 258
+ Y VDI+S G + E+V + + D + + K + P A P V
Sbjct: 197 ILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTV 256
Query: 259 KAFIEKCIAQPRARPSASELLKDPFFSELNDDD 291
+ ++E P + EL D F ++ D
Sbjct: 257 RNYVENRPKYPGIK--FEELFPDWIFPSESERD 287
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 24/200 (12%)
Query: 102 LNFITEVCTSGNLRTYRKKHRH----------------VSIKALKKWSKQVLEGLEYLHT 145
L I E C GNL TY + R+ ++++ L +S QV +G+E+L +
Sbjct: 98 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 157
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS--HAAHSIIGTP-EYMAPE-LY 201
+ IHRDL NI ++ VKI D G A + + P ++MAPE ++
Sbjct: 158 RK--CIHRDLAARNILLSEK-NVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIF 214
Query: 202 EEDYTEMVDIYSFGLCLLEMVTMEI-PYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKA 260
+ YT D++SFG+ L E+ ++ PY + +++ G + +A + +
Sbjct: 215 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT 274
Query: 261 FIEKCIAQPRARPSASELLK 280
++ +P RP+ SEL++
Sbjct: 275 MLDCWHGEPSQRPTFSELVE 294
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 32/204 (15%)
Query: 102 LNFITEVCTSGNLRTYRKKHRH----------------VSIKALKKWSKQVLEGLEYLHT 145
L I E C GNL TY + R+ ++++ L +S QV +G+E+L +
Sbjct: 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 166
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA-------IVGRSHAAHSIIGTPEYMAP 198
+ IHRDL NI ++ VKI D G A V + A + ++MAP
Sbjct: 167 RK--CIHRDLAARNILLSEK-NVVKICDFGLARDIYKDPDXVRKGDARLPL----KWMAP 219
Query: 199 E-LYEEDYTEMVDIYSFGLCLLEMVTMEI-PYSECDSVAKIYKKVTGGVKPQALNKVKDP 256
E +++ YT D++SFG+ L E+ ++ PY + +++ G + +A +
Sbjct: 220 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE 279
Query: 257 EVKAFIEKCIAQPRARPSASELLK 280
+ ++ +P RP+ SEL++
Sbjct: 280 MYQTMLDCWHGEPSQRPTFSELVE 303
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 117/271 (43%), Gaps = 30/271 (11%)
Query: 28 YSD--LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNK 85
Y+D ++G+G+ VY+A + G VA +V + NR E+Q++R L +
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QGKAFKNR---ELQIMRKLDHC 73
Query: 86 YII----VCYSVWLDDQHNTLNFITEVCTSGNLRT---YRKKHRHVSIKALKKWSKQVLE 138
I+ YS LN + + R Y + + + + +K + Q+
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAP 198
L Y+H+ C HRD+ N+ ++ + +K+ D G A + R S I + Y AP
Sbjct: 134 SLAYIHSFGIC--HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 191
Query: 199 ELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQA---- 249
EL DYT +D++S G L E++ + + S D + +I K + + Q
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 251
Query: 250 --LNKVKDPEVKAFIEKCIAQPRARPSASEL 278
+ P++KA + +PR P A L
Sbjct: 252 PNYTEFAFPQIKAHPWTKVFRPRTPPEAIAL 282
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY++L +G GA V A+D + VA ++ S F E R E+++L ++
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPF-EHQTYCQRTLREIKILLRFRH 80
Query: 85 KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRK-KHRHVSIKALKKWSKQVLEGLEYL 143
+ II + + + V Y+ K +H+S + + Q+L GL+Y+
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 140
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI----IGTPEYMAPE 199
H+ ++HRDL SN+ +N +KI D G A + H + T Y APE
Sbjct: 141 HSAN--VLHRDLKPSNLLLN-TTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 200 --LYEEDYTEMVDIYSFGLCLLEMVT 223
L + YT+ +DI+S G L EM++
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY++L +G GA V A+D + VA ++ S F E R E+++L ++
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPF-EHQTYCQRTLREIKILLRFRH 100
Query: 85 KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRK-KHRHVSIKALKKWSKQVLEGLEYL 143
+ II + + + V Y+ K +H+S + + Q+L GL+Y+
Sbjct: 101 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 160
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI----IGTPEYMAPE 199
H+ ++HRDL SN+ +N +KI D G A + H + T Y APE
Sbjct: 161 HSAN--VLHRDLKPSNLLLNTTC-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
Query: 200 --LYEEDYTEMVDIYSFGLCLLEMVT 223
L + YT+ +DI+S G L EM++
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY++L +G GA V A+D + VA ++ S F E R E+++L ++
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPF-EHQTYCQRTLREIKILLRFRH 84
Query: 85 KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRK-KHRHVSIKALKKWSKQVLEGLEYL 143
+ II + + + V Y+ K +H+S + + Q+L GL+Y+
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 144
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI----IGTPEYMAPE 199
H+ ++HRDL SN+ +N +KI D G A + H + T Y APE
Sbjct: 145 HSAN--VLHRDLKPSNLLLNTTC-DLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 201
Query: 200 --LYEEDYTEMVDIYSFGLCLLEMVT 223
L + YT+ +DI+S G L EM++
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY++L +G GA V A+D + VA ++ S F E R E+++L ++
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPF-EHQTYCQRTLREIKILLRFRH 85
Query: 85 KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRK-KHRHVSIKALKKWSKQVLEGLEYL 143
+ II + + + V Y+ K +H+S + + Q+L GL+Y+
Sbjct: 86 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 145
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI----IGTPEYMAPE 199
H+ ++HRDL SN+ +N +KI D G A + H + T Y APE
Sbjct: 146 HSAN--VLHRDLKPSNLLLNTTC-DLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 202
Query: 200 --LYEEDYTEMVDIYSFGLCLLEMVT 223
L + YT+ +DI+S G L EM++
Sbjct: 203 IMLNSKGYTKSIDIWSVGCILAEMLS 228
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY++L +G GA V A+D + VA ++ S F E R E+++L ++
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPF-EHQTYCQRTLREIKILLRFRH 82
Query: 85 KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRK-KHRHVSIKALKKWSKQVLEGLEYL 143
+ II + + + V Y+ K +H+S + + Q+L GL+Y+
Sbjct: 83 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 142
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI----IGTPEYMAPE 199
H+ ++HRDL SN+ +N +KI D G A + H + T Y APE
Sbjct: 143 HSAN--VLHRDLKPSNLLLNTTC-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 200 --LYEEDYTEMVDIYSFGLCLLEMVT 223
L + YT+ +DI+S G L EM++
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 16/181 (8%)
Query: 72 LHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTY--------RKKHRH 123
+E+Q++ +KN+Y + C + + ++ + I E + ++ + +
Sbjct: 90 FKNELQIITDIKNEYCLTCEGIITN--YDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF 147
Query: 124 VSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 183
+ I+ +K K VL Y+H +E I HRD+ SNI ++ N G+VK+ D G + +
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIH-NEKNICHRDVKPSNILMDKN-GRVKLSDFGESEYMVDK 205
Query: 184 HAAHSIIGTPEYMAPELY--EEDYT-EMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKK 240
S GT E+M PE + E Y VDI+S G+CL M +P+S S+ +++
Sbjct: 206 KIKGSR-GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNN 264
Query: 241 V 241
+
Sbjct: 265 I 265
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY++L +G GA V A+D + VA ++ S F E R E+++L ++
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPF-EHQTYCQRTLREIKILLRFRH 88
Query: 85 KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRK-KHRHVSIKALKKWSKQVLEGLEYL 143
+ II + + + V Y+ K +H+S + + Q+L GL+Y+
Sbjct: 89 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 148
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI----IGTPEYMAPE 199
H+ ++HRDL SN+ +N +KI D G A + H + T Y APE
Sbjct: 149 HSAN--VLHRDLKPSNLLLNTTC-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 205
Query: 200 --LYEEDYTEMVDIYSFGLCLLEMVT 223
L + YT+ +DI+S G L EM++
Sbjct: 206 IMLNSKGYTKSIDIWSVGCILAEMLS 231
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY++L +G GA V A+D + VA ++ S F E R E+++L ++
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPF-EHQTYCQRTLREIKILLRFRH 80
Query: 85 KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRK-KHRHVSIKALKKWSKQVLEGLEYL 143
+ II + + + V Y+ K +H+S + + Q+L GL+Y+
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 140
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI----IGTPEYMAPE 199
H+ ++HRDL SN+ +N +KI D G A + H + T Y APE
Sbjct: 141 HSAN--VLHRDLKPSNLLLNTTC-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 200 --LYEEDYTEMVDIYSFGLCLLEMVT 223
L + YT+ +DI+S G L EM++
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY++L +G GA V A+D + VA ++ S F E R E+++L ++
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPF-EHQTYCQRTLREIKILLRFRH 80
Query: 85 KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRK-KHRHVSIKALKKWSKQVLEGLEYL 143
+ II + + + V Y+ K +H+S + + Q+L GL+Y+
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 140
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI----IGTPEYMAPE 199
H+ ++HRDL SN+ +N +KI D G A + H + T Y APE
Sbjct: 141 HSAN--VLHRDLKPSNLLLN-TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 200 --LYEEDYTEMVDIYSFGLCLLEMVT 223
L + YT+ +DI+S G L EM++
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY++L +G GA V A+D + VA ++ S F E R E+++L ++
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPF-EHQTYCQRTLREIKILLRFRH 85
Query: 85 KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRK-KHRHVSIKALKKWSKQVLEGLEYL 143
+ II + + + V Y+ K +H+S + + Q+L GL+Y+
Sbjct: 86 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 145
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI----IGTPEYMAPE 199
H+ ++HRDL SN+ +N +KI D G A + H + T Y APE
Sbjct: 146 HSAN--VLHRDLKPSNLLLNTTC-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 202
Query: 200 --LYEEDYTEMVDIYSFGLCLLEMVT 223
L + YT+ +DI+S G L EM++
Sbjct: 203 IMLNSKGYTKSIDIWSVGCILAEMLS 228
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY++L +G GA V A+D + VA ++ S F E R E+++L ++
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPF-EHQTYCQRTLREIKILLRFRH 86
Query: 85 KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRK-KHRHVSIKALKKWSKQVLEGLEYL 143
+ II + + + V Y+ K +H+S + + Q+L GL+Y+
Sbjct: 87 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 146
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI----IGTPEYMAPE 199
H+ ++HRDL SN+ +N +KI D G A + H + T Y APE
Sbjct: 147 HSAN--VLHRDLKPSNLLLNTTC-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 203
Query: 200 --LYEEDYTEMVDIYSFGLCLLEMVT 223
L + YT+ +DI+S G L EM++
Sbjct: 204 IMLNSKGYTKSIDIWSVGCILAEMLS 229
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY++L +G GA V A+D + VA ++ S F E R E+++L ++
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPF-EHQTYCQRTLREIKILLRFRH 77
Query: 85 KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRK-KHRHVSIKALKKWSKQVLEGLEYL 143
+ II + + + V Y+ K +H+S + + Q+L GL+Y+
Sbjct: 78 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 137
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI----IGTPEYMAPE 199
H+ ++HRDL SN+ +N +KI D G A + H + T Y APE
Sbjct: 138 HSAN--VLHRDLKPSNLLLNTTC-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 194
Query: 200 --LYEEDYTEMVDIYSFGLCLLEMVT 223
L + YT+ +DI+S G L EM++
Sbjct: 195 IMLNSKGYTKSIDIWSVGCILAEMLS 220
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY++L +G GA V A+D + VA ++ S F E R E+++L ++
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPF-EHQTYCQRTLREIKILLRFRH 84
Query: 85 KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRK-KHRHVSIKALKKWSKQVLEGLEYL 143
+ II + + + V Y+ K +H+S + + Q+L GL+Y+
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 144
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI----IGTPEYMAPE 199
H+ ++HRDL SN+ +N +KI D G A + H + T Y APE
Sbjct: 145 HSAN--VLHRDLKPSNLLLNTTC-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 200 --LYEEDYTEMVDIYSFGLCLLEMVT 223
L + YT+ +DI+S G L EM++
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 122/264 (46%), Gaps = 18/264 (6%)
Query: 30 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIV 89
+ +G G+ +V A + I A ++ +F ED V+R E++++++L + II
Sbjct: 15 NTIGRGSWGEVKIAVQKGTRIRRAAKKIP-KYFVED---VDRFKQEIEIMKSLDHPNIIR 70
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKA-LKKWSKQVLEGLEYLHTHEP 148
Y + D+ + + E+CT G L R H+ V ++ + K VL + Y H
Sbjct: 71 LYETFEDN--TDIYLVMELCTGGELFE-RVVHKRVFRESDAARIMKDVLSAVAYCHKLN- 126
Query: 149 CIIHRDLNCSNIFI--NGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEEDYT 206
+ HRDL N + +K+ D G AA + +GTP Y++P++ E Y
Sbjct: 127 -VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYG 185
Query: 207 EMVDIYSFGLCLLEMVTMEIPYS---ECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIE 263
D +S G+ + ++ P+S + + + KI + + LN P+ ++ I
Sbjct: 186 PECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLN--VSPQAESLIR 243
Query: 264 KCIAQ-PRARPSASELLKDPFFSE 286
+ + + P+ R ++ + L+ +F +
Sbjct: 244 RLLTKSPKQRITSLQALEHEWFEK 267
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY++L +G GA V A+D + VA ++ S F E R E+++L ++
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKI--SPF-EHQTYCQRTLREIKILLRFRH 84
Query: 85 KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRK-KHRHVSIKALKKWSKQVLEGLEYL 143
+ II + + + V Y+ K +H+S + + Q+L GL+Y+
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 144
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI----IGTPEYMAPE 199
H+ ++HRDL SN+ +N +KI D G A + H + T Y APE
Sbjct: 145 HSAN--VLHRDLKPSNLLLNTTC-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 200 --LYEEDYTEMVDIYSFGLCLLEMVT 223
L + YT+ +DI+S G L EM++
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY++L +G GA V A+D + VA ++ S F E R E+++L ++
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPF-EHQTYCQRTLREIKILLRFRH 84
Query: 85 KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRK-KHRHVSIKALKKWSKQVLEGLEYL 143
+ II + + + V Y+ K +H+S + + Q+L GL+Y+
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 144
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI----IGTPEYMAPE 199
H+ ++HRDL SN+ +N +KI D G A + H + T Y APE
Sbjct: 145 HSAN--VLHRDLKPSNLLLN-TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 200 --LYEEDYTEMVDIYSFGLCLLEMVT 223
L + YT+ +DI+S G L EM++
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY++L +G GA V A+D + VA ++ S F E R E+++L ++
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPF-EHQTYCQRTLREIKILLRFRH 80
Query: 85 KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRK-KHRHVSIKALKKWSKQVLEGLEYL 143
+ II + + + V Y+ K +H+S + + Q+L GL+Y+
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 140
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI----IGTPEYMAPE 199
H+ ++HRDL SN+ +N +KI D G A + H + T Y APE
Sbjct: 141 HSAN--VLHRDLKPSNLLLNTTC-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 200 --LYEEDYTEMVDIYSFGLCLLEMVT 223
L + YT+ +DI+S G L EM++
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 122/264 (46%), Gaps = 18/264 (6%)
Query: 30 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIV 89
+ +G G+ +V A + I A ++ +F ED V+R E++++++L + II
Sbjct: 32 NTIGRGSWGEVKIAVQKGTRIRRAAKKIP-KYFVED---VDRFKQEIEIMKSLDHPNIIR 87
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKA-LKKWSKQVLEGLEYLHTHEP 148
Y + D+ + + E+CT G L R H+ V ++ + K VL + Y H
Sbjct: 88 LYETFEDN--TDIYLVMELCTGGELFE-RVVHKRVFRESDAARIMKDVLSAVAYCHKLN- 143
Query: 149 CIIHRDLNCSNIFI--NGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEEDYT 206
+ HRDL N + +K+ D G AA + +GTP Y++P++ E Y
Sbjct: 144 -VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYG 202
Query: 207 EMVDIYSFGLCLLEMVTMEIPYS---ECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIE 263
D +S G+ + ++ P+S + + + KI + + LN P+ ++ I
Sbjct: 203 PECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLN--VSPQAESLIR 260
Query: 264 KCIAQ-PRARPSASELLKDPFFSE 286
+ + + P+ R ++ + L+ +F +
Sbjct: 261 RLLTKSPKQRITSLQALEHEWFEK 284
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY++L +G GA V A+D + VA ++ S F E R E+++L ++
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPF-EHQTYCQRTLREIKILLRFRH 78
Query: 85 KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRK-KHRHVSIKALKKWSKQVLEGLEYL 143
+ II + + + V Y+ K +H+S + + Q+L GL+Y+
Sbjct: 79 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 138
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI----IGTPEYMAPE 199
H+ ++HRDL SN+ +N +KI D G A + H + T Y APE
Sbjct: 139 HSAN--VLHRDLKPSNLLLNTTC-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 195
Query: 200 --LYEEDYTEMVDIYSFGLCLLEMVT 223
L + YT+ +DI+S G L EM++
Sbjct: 196 IMLNSKGYTKSIDIWSVGCILAEMLS 221
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 97/224 (43%), Gaps = 34/224 (15%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+G G VY+A G A ++RL ED + + E+ +L+ LK+ I+ Y
Sbjct: 10 IGEGTYGVVYKA-QNNYGETFALKKIRLE--KEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 92 SVWLDDQHNTLNF---------ITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEY 142
V + L F + +VC G + K + Q+L G+ Y
Sbjct: 67 DVIHTKKRLVLVFEHLDQDLKKLLDVCEGG-----------LESVTAKSFLLQLLNGIAY 115
Query: 143 LHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG--RSHAAHSIIGTPEYMAPEL 200
H ++HRDL N+ IN G++KI D G A G H I+ T Y AP++
Sbjct: 116 CHDRR--VLHRDLKPQNLLINRE-GELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDV 171
Query: 201 Y--EEDYTEMVDIYSFGLCLLEMV--TMEIP-YSECDSVAKIYK 239
+ Y+ +DI+S G EMV T P SE D + +I++
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFR 215
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY++L +G GA V A+D + VA ++ S F E R E+++L ++
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPF-EHQTYXQRTLREIKILLRFRH 84
Query: 85 KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRK-KHRHVSIKALKKWSKQVLEGLEYL 143
+ II + + + V Y+ K +H+S + + Q+L GL+Y+
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 144
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI----IGTPEYMAPE 199
H+ ++HRDL SN+ +N +KI D G A + H + T Y APE
Sbjct: 145 HSAN--VLHRDLKPSNLLLN-TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 200 --LYEEDYTEMVDIYSFGLCLLEMVT 223
L + YT+ +DI+S G L EM++
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 105/223 (47%), Gaps = 22/223 (9%)
Query: 78 LLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVL 137
LLR ++ II V+ D +H + +TE+ G L + + S + +
Sbjct: 74 LLRYGQHPNIITLKDVYDDGKH--VYLVTELMRGGELLDKILRQKFFSEREASFVLHTIG 131
Query: 138 EGLEYLHTHEPCIIHRDLNCSNIFI---NGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPE 194
+ +EYLH+ ++HRDL SNI +GN ++I D GFA + A + ++ TP
Sbjct: 132 KTVEYLHSQ--GVVHRDLKPSNILYVDESGNPECLRICDFGFAK---QLRAENGLLMTPC 186
Query: 195 Y----MAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSE--CDSVAKIYKKVTGG--- 244
Y +APE L + Y E DI+S G+ L M+ P++ D+ +I ++ G
Sbjct: 187 YTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFT 246
Query: 245 VKPQALNKVKDPEVKAFIEKCI-AQPRARPSASELLKDPFFSE 286
+ N V + K + K + P R +A ++L+ P+ ++
Sbjct: 247 LSGGNWNTVSE-TAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY++L +G GA V A+D + VA ++ S F E R E+++L ++
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPF-EHQTYCQRTLREIKILLRFRH 80
Query: 85 KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRK-KHRHVSIKALKKWSKQVLEGLEYL 143
+ II + + + V Y+ K +H+S + + Q+L GL+Y+
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 140
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI----IGTPEYMAPE 199
H+ ++HRDL SN+ +N +KI D G A + H + T Y APE
Sbjct: 141 HSAN--VLHRDLKPSNLLLN-TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 200 --LYEEDYTEMVDIYSFGLCLLEMVT 223
L + YT+ +DI+S G L EM++
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY++L +G GA V A+D + VA ++ S F E R E+++L ++
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPF-EHQTYCQRTLREIKILLRFRH 78
Query: 85 KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRK-KHRHVSIKALKKWSKQVLEGLEYL 143
+ II + + + V Y+ K +H+S + + Q+L GL+Y+
Sbjct: 79 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 138
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI----IGTPEYMAPE 199
H+ ++HRDL SN+ +N +KI D G A + H + T Y APE
Sbjct: 139 HSAN--VLHRDLKPSNLLLNTTC-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 195
Query: 200 --LYEEDYTEMVDIYSFGLCLLEMVT 223
L + YT+ +DI+S G L EM++
Sbjct: 196 IMLNSKGYTKSIDIWSVGCILAEMLS 221
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 105/223 (47%), Gaps = 22/223 (9%)
Query: 78 LLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVL 137
LLR ++ II V+ D +H + +TE+ G L + + S + +
Sbjct: 74 LLRYGQHPNIITLKDVYDDGKH--VYLVTELMRGGELLDKILRQKFFSEREASFVLHTIG 131
Query: 138 EGLEYLHTHEPCIIHRDLNCSNIFI---NGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPE 194
+ +EYLH+ ++HRDL SNI +GN ++I D GFA + A + ++ TP
Sbjct: 132 KTVEYLHSQ--GVVHRDLKPSNILYVDESGNPECLRICDFGFAK---QLRAENGLLMTPC 186
Query: 195 Y----MAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSE--CDSVAKIYKKVTGG--- 244
Y +APE L + Y E DI+S G+ L M+ P++ D+ +I ++ G
Sbjct: 187 YTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFT 246
Query: 245 VKPQALNKVKDPEVKAFIEKCI-AQPRARPSASELLKDPFFSE 286
+ N V + K + K + P R +A ++L+ P+ ++
Sbjct: 247 LSGGNWNTVSE-TAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 30/209 (14%)
Query: 105 ITEVCTSGNLRTY-RKKHR-------------HVSIKALKKWSKQVLEGLEYLHTHEPCI 150
ITE C G+L + R+K R +S + L +S QV +G+ +L +
Sbjct: 128 ITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKN--C 185
Query: 151 IHRDLNCSNIFI-NGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP----EYMAPE-LYEED 204
IHRD+ N+ + NG++ KIGD G A + + + + + G ++MAPE +++
Sbjct: 186 IHRDVAARNVLLTNGHVA--KIGDFGLARDI-MNDSNYIVKGNARLPVKWMAPESIFDCV 242
Query: 205 YTEMVDIYSFGLCLLEMVTMEI-PYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIE 263
YT D++S+G+ L E+ ++ + PY +K YK V G + A + + ++
Sbjct: 243 YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQ-MAQPAFAPKNIYSIMQ 301
Query: 264 KCIA-QPRARPSASELLKDPFFSELNDDD 291
C A +P RP+ ++ F E +D
Sbjct: 302 ACWALEPTHRPTFQQICS--FLQEQAQED 328
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 31 LLGSGAVKKVYRAFDQEEG----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
+LGSGA VY+ EG I VA +++ + + P E ++ ++ + +
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVA---IKILNETTGPKANVEFMDEALIMASMDHPH 78
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHT 145
++ V L T+ +T++ G L Y +H+ ++ + L W Q+ +G+ YL
Sbjct: 79 LVRLLGVCLSP---TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE- 134
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---EYMAPE-LY 201
E ++HRDL N+ + VKI D G A ++ ++ G ++MA E ++
Sbjct: 135 -ERRLVHRDLAARNVLVKSP-NHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 192
Query: 202 EEDYTEMVDIYSFGLCLLEMVT 223
+T D++S+G+ + E++T
Sbjct: 193 YRKFTHQSDVWSYGVTIWELMT 214
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 22/221 (9%)
Query: 78 LLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVL 137
LLR ++ II V+ D ++ + +TE+ G L + + S + +
Sbjct: 69 LLRYGQHPNIITLKDVYDDGKY--VYVVTELMKGGELLDKILRQKFFSEREASAVLFTIT 126
Query: 138 EGLEYLHTHEPCIIHRDLNCSNIFI---NGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPE 194
+ +EYLH ++HRDL SNI +GN ++I D GFA + A + ++ TP
Sbjct: 127 KTVEYLHAQ--GVVHRDLKPSNILYVDESGNPESIRICDFGFAK---QLRAENGLLMTPC 181
Query: 195 Y----MAPELYE-EDYTEMVDIYSFGLCLLEMVTMEIPYSEC--DSVAKIYKKVTGG--- 244
Y +APE+ E + Y DI+S G+ L M+T P++ D+ +I ++ G
Sbjct: 182 YTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFS 241
Query: 245 VKPQALNKVKDPEVKAFIEKCI-AQPRARPSASELLKDPFF 284
+ N V D K + K + P R +A+ +L+ P+
Sbjct: 242 LSGGYWNSVSD-TAKDLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 27 RYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 84
RY++L +G GA V A+D + VA ++ S F E R E+++L ++
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPF-EHQTYCQRTLREIKILLRFRH 84
Query: 85 KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRK-KHRHVSIKALKKWSKQVLEGLEYL 143
+ II + + + V Y+ K +H+S + + Q+L GL+Y+
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYI 144
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI----IGTPEYMAPE 199
H+ ++HRDL SN+ +N +KI D G A + H + T Y APE
Sbjct: 145 HSAN--VLHRDLKPSNLLLNTTC-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 200 --LYEEDYTEMVDIYSFGLCLLEMVT 223
L + YT+ +DI+S G L EM++
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 68/150 (45%), Gaps = 6/150 (4%)
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA-IVGRSHAAHSIIGTPEYMAPE-LY 201
H H+ II+RDL NI +N + G VK+ D G + H+ GT EYMAPE L
Sbjct: 136 HLHQKGIIYRDLKPENIMLN-HQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILM 194
Query: 202 EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYK--KVTGGVKPQALNKVKDPEVK 259
+ VD +S G + +M+T P++ + I K K + P + +D K
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKK 254
Query: 260 AFIEKCIAQPRARPS-ASELLKDPFFSELN 288
++ A P A E+ PFF +N
Sbjct: 255 LLKRNAASRLGAGPGDAGEVQAHPFFRHIN 284
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 98/202 (48%), Gaps = 18/202 (8%)
Query: 31 LLGSGAVKKVYRAFDQEEG----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
+LGSGA VY+ EG I VA +++ + + P E ++ ++ + +
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETVKIPVA---IKILNETTGPKANVEFMDEALIMASMDHPH 101
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHT 145
++ V L T+ +T++ G L Y +H+ ++ + L W Q+ +G+ YL
Sbjct: 102 LVRLLGVCLSP---TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE- 157
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---EYMAPE-LY 201
E ++HRDL N+ + + VKI D G A ++ ++ G ++MA E ++
Sbjct: 158 -ERRLVHRDLAARNVLVK-SPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 215
Query: 202 EEDYTEMVDIYSFGLCLLEMVT 223
+T D++S+G+ + E++T
Sbjct: 216 YRKFTHQSDVWSYGVTIWELMT 237
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 32/211 (15%)
Query: 105 ITEVCTSGNLRTYRKKHR----------------HVSIKALKKWSKQVLEGLEYLHTHEP 148
ITE C G+L + ++ R +S + L +S QV +G+ +L +
Sbjct: 128 ITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKN- 186
Query: 149 CIIHRDLNCSNIFI-NGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP----EYMAPE-LYE 202
IHRD+ N+ + NG++ KIGD G A + + + + + G ++MAPE +++
Sbjct: 187 -CIHRDVAARNVLLTNGHVA--KIGDFGLARDI-MNDSNYIVKGNARLPVKWMAPESIFD 242
Query: 203 EDYTEMVDIYSFGLCLLEMVTMEI-PYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAF 261
YT D++S+G+ L E+ ++ + PY +K YK V G + A + +
Sbjct: 243 CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQ-MAQPAFAPKNIYSI 301
Query: 262 IEKCIA-QPRARPSASELLKDPFFSELNDDD 291
++ C A +P RP+ ++ F E +D
Sbjct: 302 MQACWALEPTHRPTFQQICS--FLQEQAQED 330
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 81/174 (46%), Gaps = 20/174 (11%)
Query: 75 EVQLLRTLKNKYIIVCYSVWLD--DQHNTLNF------ITEVCTSGNLRTYRKKHRHVSI 126
E+ LLR LK+ +I V+L D+ L F + + KK +
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPR 127
Query: 127 KALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGN---IGQVKIGDLGFAAIVGRS 183
+K Q+L+G+ YLH + ++HRDL +NI + G G+VKI D+GFA +
Sbjct: 128 GMVKSLLYQILDGIHYLHAN--WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 185
Query: 184 HAAHS----IIGTPEYMAPELY--EEDYTEMVDIYSFGLCLLEMVTMEIPYSEC 231
+ ++ T Y APEL YT+ +DI++ G E++T E P C
Sbjct: 186 LKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE-PIFHC 238
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 104/218 (47%), Gaps = 13/218 (5%)
Query: 28 YSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
+ + LG+GA +V A ++ G A + + + +E+ +LR +K++ I
Sbjct: 26 FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKE---SSIENEIAVLRKIKHENI 82
Query: 88 IVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHE 147
+ ++ + N L + ++ + G L + + K +QVL+ + YLH
Sbjct: 83 VALEDIY--ESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRM- 139
Query: 148 PCIIHRDLNCSNI--FINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE-LYEED 204
I+HRDL N+ + ++ I D G + + G+ + GTP Y+APE L ++
Sbjct: 140 -GIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKP 198
Query: 205 YTEMVDIYSFGLCLLEMVTMEIP-YSECDSVAKIYKKV 241
Y++ VD +S G+ ++ P Y E DS K+++++
Sbjct: 199 YSKAVDCWSIGVIAYILLCGYPPFYDENDS--KLFEQI 234
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 30/209 (14%)
Query: 105 ITEVCTSGNLRTY-RKKHR-------------HVSIKALKKWSKQVLEGLEYLHTHEPCI 150
ITE C G+L + R+K R S + L +S QV +G+ +L +
Sbjct: 128 ITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN--C 185
Query: 151 IHRDLNCSNIFI-NGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP----EYMAPE-LYEED 204
IHRD+ N+ + NG++ KIGD G A + + + + + G ++MAPE +++
Sbjct: 186 IHRDVAARNVLLTNGHVA--KIGDFGLARDI-MNDSNYIVKGNARLPVKWMAPESIFDCV 242
Query: 205 YTEMVDIYSFGLCLLEMVTMEI-PYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIE 263
YT D++S+G+ L E+ ++ + PY +K YK V G + A + + ++
Sbjct: 243 YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQ-MAQPAFAPKNIYSIMQ 301
Query: 264 KCIA-QPRARPSASELLKDPFFSELNDDD 291
C A +P RP+ ++ F E +D
Sbjct: 302 ACWALEPTHRPTFQQICS--FLQEQAQED 328
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 16/169 (9%)
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH 146
I+ + V+ D H L + E+ G L KK +H S ++++ + H H
Sbjct: 68 IVKLHEVFHDQLHTFL--VMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVS--HMH 123
Query: 147 EPCIIHRDLNCSNIFI---NGNIGQVKIGDLGFAAIVG-RSHAAHSIIGTPEYMAPELYE 202
+ ++HRDL N+ N N+ ++KI D GFA + + + T Y APEL
Sbjct: 124 DVGVVHRDLKPENLLFTDENDNL-EIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLN 182
Query: 203 ED-YTEMVDIYSFGLCLLEMVTMEIPYSE------CDSVAKIYKKVTGG 244
++ Y E D++S G+ L M++ ++P+ C S +I KK+ G
Sbjct: 183 QNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG 231
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 30 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIV 89
D LG G VY+ + VA ++RL H P R EV LL+ LK+ I+
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIR---EVSLLKDLKHANIVT 64
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHV-SIKALKKWSKQVLEGLEYLHTHEP 148
+ + ++ TL F +L+ Y ++ ++ +K + Q+L GL Y H +
Sbjct: 65 LHDIIHTEKSLTLVF---EYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK- 120
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFA---AIVGRSHAAHSIIGTPEYMAPE--LYEE 203
++HRDL N+ IN G++K+ D G A +I +++ + T Y P+ L
Sbjct: 121 -VLHRDLKPQNLLINER-GELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDILLGST 176
Query: 204 DYTEMVDIYSFGLCLLEMVT 223
DY+ +D++ G EM T
Sbjct: 177 DYSTQIDMWGVGCIFYEMAT 196
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 100 NTLNFITEVCTSGNLRTYRKKHRH-VSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
N + I E+CT G LR++ + + + + +L ++ Q+ L YL + +HRD+
Sbjct: 83 NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR--FVHRDIAAR 140
Query: 159 NIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP--EYMAPE-LYEEDYTEMVDIYSFG 215
N+ ++ N VK+GD G + + S + G ++MAPE + +T D++ FG
Sbjct: 141 NVLVSSN-DCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFG 199
Query: 216 LCLLEMVTMEI-PYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARP 273
+C+ E++ + P+ + I + G P N P + + + KC A P RP
Sbjct: 200 VCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN--CPPTLYSLMTKCWAYDPSRRP 257
Query: 274 SASEL 278
+EL
Sbjct: 258 RFTEL 262
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 97/224 (43%), Gaps = 34/224 (15%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+G G VY+A G A ++RL ED + + E+ +L+ LK+ I+ Y
Sbjct: 10 IGEGTYGVVYKA-QNNYGETFALKKIRLE--KEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 92 SVWLDDQHNTLNF---------ITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEY 142
V + L F + +VC G + K + Q+L G+ Y
Sbjct: 67 DVIHTKKRLVLVFEHLDQDLKKLLDVCEGG-----------LESVTAKSFLLQLLNGIAY 115
Query: 143 LHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG--RSHAAHSIIGTPEYMAPEL 200
H ++HRDL N+ IN G++KI D G A G H ++ T Y AP++
Sbjct: 116 CHDRR--VLHRDLKPQNLLINRE-GELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDV 171
Query: 201 Y--EEDYTEMVDIYSFGLCLLEMV--TMEIP-YSECDSVAKIYK 239
+ Y+ +DI+S G EMV T P SE D + +I++
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFR 215
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 11/185 (5%)
Query: 100 NTLNFITEVCTSGNLRTYRKKHRH-VSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
N + I E+CT G LR++ + ++ + + +L ++ Q+ L YL + +HRD+
Sbjct: 83 NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR--FVHRDIAAR 140
Query: 159 NIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP--EYMAPE-LYEEDYTEMVDIYSFG 215
N+ ++ N VK+GD G + + S + G ++MAPE + +T D++ FG
Sbjct: 141 NVLVSSN-DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFG 199
Query: 216 LCLLEMVTMEI-PYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARP 273
+C+ E++ + P+ + I + G P N P + + + KC A P RP
Sbjct: 200 VCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN--CPPTLYSLMTKCWAYDPSRRP 257
Query: 274 SASEL 278
+EL
Sbjct: 258 RFTEL 262
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 123/287 (42%), Gaps = 39/287 (13%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVC 90
L+G G+ V + +++ G VA + S +D ++ E++LL+ L+++ ++
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLES--DDDKMVKKIAMREIKLLKQLRHENLVNL 89
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCI 150
V + L F E L + + ++K+ Q++ G+ + H+H I
Sbjct: 90 LEVCKKKKRWYLVF--EFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN--I 145
Query: 151 IHRDLNCSNIFINGNIGQVKIGDLGFA-AIVGRSHAAHSIIGTPEYMAPELYEED--YTE 207
IHRD+ NI ++ + G VK+ D GFA + + T Y APEL D Y +
Sbjct: 146 IHRDIKPENILVSQS-GVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGK 204
Query: 208 MVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVT--GGVKP---QALNK------VKDP 256
VD+++ G + EM E + + ++Y + G + P + NK V+ P
Sbjct: 205 AVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLP 264
Query: 257 EVKA-----------------FIEKCI-AQPRARPSASELLKDPFFS 285
E+K +KC+ P RP +ELL FF
Sbjct: 265 EIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 11/185 (5%)
Query: 100 NTLNFITEVCTSGNLRTYRKKHRH-VSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
N + I E+CT G LR++ + ++ + + +L ++ Q+ L YL + +HRD+
Sbjct: 83 NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR--FVHRDIAAR 140
Query: 159 NIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP--EYMAPE-LYEEDYTEMVDIYSFG 215
N+ ++ N VK+GD G + + S + G ++MAPE + +T D++ FG
Sbjct: 141 NVLVSSN-DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFG 199
Query: 216 LCLLEMVTMEI-PYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARP 273
+C+ E++ + P+ + I + G P N P + + + KC A P RP
Sbjct: 200 VCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN--CPPTLYSLMTKCWAYDPSRRP 257
Query: 274 SASEL 278
+EL
Sbjct: 258 RFTEL 262
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 124/277 (44%), Gaps = 34/277 (12%)
Query: 32 LGSGAVKKVYRA----FDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKY 86
LG GA +V A D+++ V V++ ++ L SE+++++ + K+K
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR----------------HVSIKALK 130
II D L I E + GNLR Y + +S K L
Sbjct: 96 IINLLGACTQD--GPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 131 KWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR-SHAAHSI 189
+ QV G+EYL + + IHRDL N+ + + +KI D G A + + +
Sbjct: 154 SCAYQVARGMEYLASKK--CIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDYYKKTT 210
Query: 190 IGT--PEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGV 245
G ++MAPE L++ YT D++SFG+ L E+ T+ PY V +++K + G
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEELFKLLKEGH 269
Query: 246 KPQALNKVKDPEVKAFIEKCI-AQPRARPSASELLKD 281
+ + + E+ + C A P RP+ +L++D
Sbjct: 270 RMDKPSNCTN-ELYMMMRDCWHAVPSQRPTFKQLVED 305
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 11/185 (5%)
Query: 100 NTLNFITEVCTSGNLRTYRKKHRH-VSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
N + I E+CT G LR++ + ++ + + +L ++ Q+ L YL + +HRD+
Sbjct: 80 NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR--FVHRDIAAR 137
Query: 159 NIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP--EYMAPE-LYEEDYTEMVDIYSFG 215
N+ ++ N VK+GD G + + S + G ++MAPE + +T D++ FG
Sbjct: 138 NVLVSSN-DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFG 196
Query: 216 LCLLEMVTMEI-PYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARP 273
+C+ E++ + P+ + I + G P N P + + + KC A P RP
Sbjct: 197 VCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN--CPPTLYSLMTKCWAYDPSRRP 254
Query: 274 SASEL 278
+EL
Sbjct: 255 RFTEL 259
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 11/185 (5%)
Query: 100 NTLNFITEVCTSGNLRTYRKKHRH-VSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
N + I E+CT G LR++ + ++ + + +L ++ Q+ L YL + +HRD+
Sbjct: 111 NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR--FVHRDIAAR 168
Query: 159 NIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP--EYMAPE-LYEEDYTEMVDIYSFG 215
N+ ++ N VK+GD G + + S + G ++MAPE + +T D++ FG
Sbjct: 169 NVLVSSN-DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFG 227
Query: 216 LCLLEMVTMEI-PYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARP 273
+C+ E++ + P+ + I + G P N P + + + KC A P RP
Sbjct: 228 VCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN--CPPTLYSLMTKCWAYDPSRRP 285
Query: 274 SASEL 278
+EL
Sbjct: 286 RFTEL 290
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 11/185 (5%)
Query: 100 NTLNFITEVCTSGNLRTYRKKHRH-VSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
N + I E+CT G LR++ + ++ + + +L ++ Q+ L YL + +HRD+
Sbjct: 88 NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR--FVHRDIAAR 145
Query: 159 NIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP--EYMAPE-LYEEDYTEMVDIYSFG 215
N+ ++ N VK+GD G + + S + G ++MAPE + +T D++ FG
Sbjct: 146 NVLVSSN-DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFG 204
Query: 216 LCLLEMVTMEI-PYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARP 273
+C+ E++ + P+ + I + G P N P + + + KC A P RP
Sbjct: 205 VCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN--CPPTLYSLMTKCWAYDPSRRP 262
Query: 274 SASEL 278
+EL
Sbjct: 263 RFTEL 267
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 11/185 (5%)
Query: 100 NTLNFITEVCTSGNLRTYRKKHRH-VSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
N + I E+CT G LR++ + ++ + + +L ++ Q+ L YL + +HRD+
Sbjct: 85 NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR--FVHRDIAAR 142
Query: 159 NIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP--EYMAPE-LYEEDYTEMVDIYSFG 215
N+ ++ N VK+GD G + + S + G ++MAPE + +T D++ FG
Sbjct: 143 NVLVSSN-DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFG 201
Query: 216 LCLLEMVTMEI-PYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARP 273
+C+ E++ + P+ + I + G P N P + + + KC A P RP
Sbjct: 202 VCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN--CPPTLYSLMTKCWAYDPSRRP 259
Query: 274 SASEL 278
+EL
Sbjct: 260 RFTEL 264
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 98/225 (43%), Gaps = 36/225 (16%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+G G VY+A G A ++RL ED + + E+ +L+ LK+ I+ Y
Sbjct: 10 IGEGTYGVVYKA-QNNYGETFALKKIRLE--KEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 92 SVWLDDQHNTLNF---------ITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEY 142
V + L F + +VC G + K + Q+L G+ Y
Sbjct: 67 DVIHTKKRLVLVFEHLDQDLKKLLDVCEGG-----------LESVTAKSFLLQLLNGIAY 115
Query: 143 LHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG---RSHAAHSIIGTPEYMAPE 199
H ++HRDL N+ IN G++KI D G A G R + H ++ T Y AP+
Sbjct: 116 CHDRR--VLHRDLKPQNLLINRE-GELKIADFGLARAFGIPVRKY-THEVV-TLWYRAPD 170
Query: 200 LY--EEDYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYK 239
+ + Y+ +DI+S G EMV + SE D + +I++
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFR 215
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 11/185 (5%)
Query: 100 NTLNFITEVCTSGNLRTYRKKHRH-VSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
N + I E+CT G LR++ + ++ + + +L ++ Q+ L YL + +HRD+
Sbjct: 86 NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR--FVHRDIAAR 143
Query: 159 NIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP--EYMAPE-LYEEDYTEMVDIYSFG 215
N+ ++ N VK+GD G + + S + G ++MAPE + +T D++ FG
Sbjct: 144 NVLVSSN-DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFG 202
Query: 216 LCLLEMVTMEI-PYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARP 273
+C+ E++ + P+ + I + G P N P + + + KC A P RP
Sbjct: 203 VCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN--CPPTLYSLMTKCWAYDPSRRP 260
Query: 274 SASEL 278
+EL
Sbjct: 261 RFTEL 265
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 17/203 (8%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG+G +V+ + +V + + V E L++TL++ ++ Y
Sbjct: 21 LGAGQFGEVWMGYYNNS------TKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLY 74
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHR--HVSIKALKKWSKQVLEGLEYLHTHEPC 149
+V + + ITE G+L + K V + L +S Q+ EG+ Y+
Sbjct: 75 AV--VTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN-- 130
Query: 150 IIHRDLNCSNIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTP-EYMAPELYEED-YT 206
IHRDL +N+ ++ ++ KI D G A ++ + A P ++ APE +T
Sbjct: 131 YIHRDLRAANVLVSESL-MCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFT 189
Query: 207 EMVDIYSFGLCLLEMVTM-EIPY 228
D++SFG+ L E+VT +IPY
Sbjct: 190 IKSDVWSFGILLYEIVTYGKIPY 212
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 101/231 (43%), Gaps = 33/231 (14%)
Query: 13 GEPFVEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVR--LSHFSEDPVLVN 70
G PF+ R + +G G +V+R Q E + V R S F E
Sbjct: 26 GLPFLVQRTVARQITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRE-----T 80
Query: 71 RLHSEVQLLRTLKNKYIIVCYSVWLDDQHNT--LNFITEVCTSGNLRTYRKKHRHVSIKA 128
L++ V L +++ I+ + + +H++ L IT G+L Y + ++
Sbjct: 81 ELYNTVML----RHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC 136
Query: 129 LKKWSKQVLEGLEYLHTH------EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR 182
L+ + GL +LH +P I HRDL NI + N GQ I DLG A + +
Sbjct: 137 LRI-VLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN-GQCCIADLGLAVMHSQ 194
Query: 183 SHAAHSI-----IGTPEYMAPELYEE-------DYTEMVDIYSFGLCLLEM 221
S + +GT YMAPE+ +E D + VDI++FGL L E+
Sbjct: 195 STNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA-IVGRSHAAHSIIGTPEYMAPE-LY 201
H H+ II+RDL NI +N + G VK+ D G + H GT EYMAPE L
Sbjct: 136 HLHQKGIIYRDLKPENIMLN-HQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILM 194
Query: 202 EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYK--KVTGGVKPQALNKVKDPEVK 259
+ VD +S G + +M+T P++ + I K K + P + +D K
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKK 254
Query: 260 AFIEKCIAQPRARPS-ASELLKDPFFSELN 288
++ A P A E+ PFF +N
Sbjct: 255 LLKRNAASRLGAGPGDAGEVQAHPFFRHIN 284
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 18/263 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA +V A ++ VA V + + P + E+ + + L ++ ++ Y
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP---ENIKKEIXINKMLNHENVVKFY 71
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ N E C+ G L + + +++ Q++ G+ YLH I
Sbjct: 72 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI--GIT 127
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELYE--EDYT 206
HRD+ N+ ++ +KI D G A + R + + GT Y+APEL + E +
Sbjct: 128 HRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 186
Query: 207 EMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK--DPEVKAFIEK 264
E VD++S G+ L M+ E+P+ + + Y K LN K D A + K
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE--KKTYLNPWKKIDSAPLALLHK 244
Query: 265 CIAQ-PRARPSASELLKDPFFSE 286
+ + P AR + ++ KD ++++
Sbjct: 245 ILVENPSARITIPDIKKDRWYNK 267
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 121/269 (44%), Gaps = 23/269 (8%)
Query: 19 VDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQL 78
+DPS + +GSG V+ + + +VA +R SE+ + E ++
Sbjct: 5 IDPSEL--TFVQEIGSGQFGLVHLGYWLNKD-KVAIKTIREGAMSEEDFI-----EEAEV 56
Query: 79 LRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHV-SIKALKKWSKQVL 137
+ L + ++ Y V L + + +TE G L Y + R + + + L V
Sbjct: 57 MMKLSHPKLVQLYGVCL--EQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVC 114
Query: 138 EGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---E 194
EG+ YL E C+IHRDL N + N +K+ D G V S GT +
Sbjct: 115 EGMAYLE--EACVIHRDLAARNCLVGEN-QVIKVSDFGMTRFVLDDQYTSS-TGTKFPVK 170
Query: 195 YMAPELYE-EDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGVKPQALNK 252
+ +PE++ Y+ D++SFG+ + E+ + +IPY E S +++ + ++ G + +
Sbjct: 171 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY-ENRSNSEVVEDISTGFRLYK-PR 228
Query: 253 VKDPEVKAFIEKCIAQ-PRARPSASELLK 280
+ V + C + P RP+ S LL+
Sbjct: 229 LASTHVYQIMNHCWRERPEDRPAFSRLLR 257
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 18/263 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA +V A ++ VA V + + P + E+ + + L ++ ++ Y
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP---ENIKKEIXINKMLNHENVVKFY 70
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ N E C+ G L + + +++ Q++ G+ YLH I
Sbjct: 71 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI--GIT 126
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELYE--EDYT 206
HRD+ N+ ++ +KI D G A + R + + GT Y+APEL + E +
Sbjct: 127 HRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 207 EMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK--DPEVKAFIEK 264
E VD++S G+ L M+ E+P+ + + Y K LN K D A + K
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE--KKTYLNPWKKIDSAPLALLHK 243
Query: 265 CIAQ-PRARPSASELLKDPFFSE 286
+ + P AR + ++ KD ++++
Sbjct: 244 ILVENPSARITIPDIKKDRWYNK 266
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 18/263 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA +V A ++ VA V + + P + E+ + + L ++ ++ Y
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP---ENIKKEIXINKMLNHENVVKFY 70
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ N E C+ G L + + +++ Q++ G+ YLH I
Sbjct: 71 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI--GIT 126
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELYE--EDYT 206
HRD+ N+ ++ +KI D G A + R + + GT Y+APEL + E +
Sbjct: 127 HRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 207 EMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK--DPEVKAFIEK 264
E VD++S G+ L M+ E+P+ + + Y K LN K D A + K
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE--KKTYLNPWKKIDSAPLALLHK 243
Query: 265 CIAQ-PRARPSASELLKDPFFSE 286
+ + P AR + ++ KD ++++
Sbjct: 244 ILVENPSARITIPDIKKDRWYNK 266
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 19/104 (18%)
Query: 136 VLEGLEYLHTH------EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI 189
+ GL +LH +P I HRDL NI + N GQ I DLG A + +S +
Sbjct: 114 IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN-GQCCIADLGLAVMHSQSTNQLDV 172
Query: 190 -----IGTPEYMAPELYEE-------DYTEMVDIYSFGLCLLEM 221
+GT YMAPE+ +E D + VDI++FGL L E+
Sbjct: 173 GNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 120/270 (44%), Gaps = 25/270 (9%)
Query: 19 VDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQL 78
+DPS + +GSG V+ + + +VA ++ SED + E ++
Sbjct: 24 IDPSEL--TFVQEIGSGQFGLVHLGYWLNKD-KVAIKTIKEGSMSEDDFI-----EEAEV 75
Query: 79 LRTLKNKYIIVCYSVWLDDQHNTL--NFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQV 136
+ L + ++ Y V L+ L F+ C S LRT R + + L V
Sbjct: 76 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDV 132
Query: 137 LEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP--- 193
EG+ YL E C+IHRDL N + N +K+ D G V S GT
Sbjct: 133 CEGMAYLE--EACVIHRDLAARNCLVGEN-QVIKVSDFGMTRFVLDDQYTSS-TGTKFPV 188
Query: 194 EYMAPELYE-EDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGVKPQALN 251
++ +PE++ Y+ D++SFG+ + E+ + +IPY E S +++ + ++ G +
Sbjct: 189 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY-ENRSNSEVVEDISTGFRLYK-P 246
Query: 252 KVKDPEVKAFIEKCIAQ-PRARPSASELLK 280
++ V + C + P RP+ S LL+
Sbjct: 247 RLASTHVYQIMNHCWKERPEDRPAFSRLLR 276
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG+G +V+ + +VA ++ S D L +E L++ L+++ ++ Y
Sbjct: 21 LGAGQAGEVWMGYYNGH-TKVAVKSLKQGSMSPDAFL-----AEANLMKQLQHQRLVRLY 74
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHV--SIKALKKWSKQVLEGLEYLHTHEPC 149
+V + ITE +G+L + K + +I L + Q+ EG+ ++ E
Sbjct: 75 AV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 129
Query: 150 IIHRDLNCSNIFINGNIGQVKIGDLGFAAIV------GRSHAAHSIIGTPEYMAPE-LYE 202
IHRDL +NI ++ + KI D G A ++ R A I ++ APE +
Sbjct: 130 YIHRDLRAANILVSDTLS-CKIADFGLARLIEDAEXTAREGAKFPI----KWTAPEAINY 184
Query: 203 EDYTEMVDIYSFGLCLLEMVTM-EIPY 228
+T D++SFG+ L E+VT IPY
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 19/104 (18%)
Query: 136 VLEGLEYLHTH------EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI 189
+ GL +LH +P I HRDL NI + N GQ I DLG A + +S +
Sbjct: 114 IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN-GQCCIADLGLAVMHSQSTNQLDV 172
Query: 190 -----IGTPEYMAPELYEE-------DYTEMVDIYSFGLCLLEM 221
+GT YMAPE+ +E D + VDI++FGL L E+
Sbjct: 173 GNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG G+ +V+R D++ G + A +VRL F + E+ L + I+ Y
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE---------ELMACAGLTSPRIVPLY 151
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ +N E+ G+L K+ + + Q LEGLEYLH+ I+
Sbjct: 152 GAVREGP--WVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRR--IL 207
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSII------GTPEYMAPE-LYEED 204
H D+ N+ ++ + + D G A + S++ GT +MAPE +
Sbjct: 208 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRS 267
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSE 230
VD++S +L M+ P+++
Sbjct: 268 CDAKVDVWSSCCMMLHMLNGCHPWTQ 293
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 15/214 (7%)
Query: 80 RTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEG 139
R+L++ I+ V L H L + E + G L S + + +Q++ G
Sbjct: 70 RSLRHPNIVRFKEVILTPTH--LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG 127
Query: 140 LEYLHTHEPCIIHRDLNCSNIFINGNIG-QVKIGDLGFAAIVGRSHAAHSIIGTPEYMAP 198
+ Y H + C HRDL N ++G+ ++KI D G++ S +GTP Y+AP
Sbjct: 128 VSYCHAMQVC--HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAP 185
Query: 199 E-LYEEDYT-EMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKD- 255
E L +++Y ++ D++S G+ L M+ P+ + + K + + Q + D
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQY--AIPDY 243
Query: 256 ----PEVKAFIEKC-IAQPRARPSASELLKDPFF 284
PE + I + +A P R S E+ +F
Sbjct: 244 VHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG+G +V+ + +VA ++ S D L +E L++ L+++ ++ Y
Sbjct: 29 LGAGQFGEVWMGYYNGH-TKVAVKSLKQGSMSPDAFL-----AEANLMKQLQHQRLVRLY 82
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHV--SIKALKKWSKQVLEGLEYLHTHEPC 149
+V + ITE +G+L + K + +I L + Q+ EG+ ++ E
Sbjct: 83 AV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 137
Query: 150 IIHRDLNCSNIFINGNIGQVKIGDLGFAAIV------GRSHAAHSIIGTPEYMAPE-LYE 202
IHRDL +NI ++ + KI D G A ++ R A I ++ APE +
Sbjct: 138 YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGAKFPI----KWTAPEAINY 192
Query: 203 EDYTEMVDIYSFGLCLLEMVTM-EIPY 228
+T D++SFG+ L E+VT IPY
Sbjct: 193 GTFTIKSDVWSFGILLTEIVTHGRIPY 219
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG+G +V+ + +VA ++ S D L +E L++ L+++ ++ Y
Sbjct: 30 LGAGQFGEVWMGYYNGH-TKVAVKSLKQGSMSPDAFL-----AEANLMKQLQHQRLVRLY 83
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHV--SIKALKKWSKQVLEGLEYLHTHEPC 149
+V + ITE +G+L + K + +I L + Q+ EG+ ++ E
Sbjct: 84 AV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 138
Query: 150 IIHRDLNCSNIFINGNIGQVKIGDLGFAAIV------GRSHAAHSIIGTPEYMAPE-LYE 202
IHRDL +NI ++ + KI D G A ++ R A I ++ APE +
Sbjct: 139 YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGAKFPI----KWTAPEAINY 193
Query: 203 EDYTEMVDIYSFGLCLLEMVTM-EIPY 228
+T D++SFG+ L E+VT IPY
Sbjct: 194 GTFTIKSDVWSFGILLTEIVTHGRIPY 220
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 18/263 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA +V A ++ VA V + + P + E+ + + L ++ ++ Y
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP---ENIKKEICINKMLNHENVVKFY 70
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ N E C+ G L + + +++ Q++ G+ YLH I
Sbjct: 71 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI--GIT 126
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELYE--EDYT 206
HRD+ N+ ++ +KI D G A + R + + GT Y+APEL + E +
Sbjct: 127 HRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 207 EMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK--DPEVKAFIEK 264
E VD++S G+ L M+ E+P+ + + Y K LN K D A + K
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE--KKTYLNPWKKIDSAPLALLHK 243
Query: 265 CIAQ-PRARPSASELLKDPFFSE 286
+ + P AR + ++ KD ++++
Sbjct: 244 ILVENPSARITIPDIKKDRWYNK 266
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 95/198 (47%), Gaps = 8/198 (4%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG G VY A +++ +A + S ++ V ++L E+++ L++ I+ Y
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV-EHQLRREIEIQSHLRHPNILRMY 80
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ + D + + + E G L +KH + + +++ + L Y HE +I
Sbjct: 81 NYFHDRK--RIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHY--CHERKVI 136
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYE-EDYTEMVD 210
HRD+ N+ + G G++KI D G+ ++ S + GT +Y+ PE+ E + + E VD
Sbjct: 137 HRDIKPENLLM-GYKGELKIADFGW-SVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVD 194
Query: 211 IYSFGLCLLEMVTMEIPY 228
++ G+ E + P+
Sbjct: 195 LWCAGVLCYEFLVGMPPF 212
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG+G +V+ + +VA ++ S D L +E L++ L+++ ++ Y
Sbjct: 27 LGAGQFGEVWMGYYNGH-TKVAVKSLKQGSMSPDAFL-----AEANLMKQLQHQRLVRLY 80
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHV--SIKALKKWSKQVLEGLEYLHTHEPC 149
+V + ITE +G+L + K + +I L + Q+ EG+ ++ E
Sbjct: 81 AV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 135
Query: 150 IIHRDLNCSNIFINGNIGQVKIGDLGFAAIV------GRSHAAHSIIGTPEYMAPE-LYE 202
IHRDL +NI ++ + KI D G A ++ R A I ++ APE +
Sbjct: 136 YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGAKFPI----KWTAPEAINY 190
Query: 203 EDYTEMVDIYSFGLCLLEMVTM-EIPY 228
+T D++SFG+ L E+VT IPY
Sbjct: 191 GTFTIKSDVWSFGILLTEIVTHGRIPY 217
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 18/263 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA +V A ++ VA V + + P + E+ + + L ++ ++ Y
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCP---ENIKKEICINKMLNHENVVKFY 70
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ N E C+ G L + + +++ Q++ G+ YLH I
Sbjct: 71 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI--GIT 126
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELYE--EDYT 206
HRD+ N+ ++ +KI D G A + R + + GT Y+APEL + E +
Sbjct: 127 HRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 207 EMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK--DPEVKAFIEK 264
E VD++S G+ L M+ E+P+ + + Y K LN K D A + K
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE--KKTYLNPWKKIDSAPLALLHK 243
Query: 265 CIAQ-PRARPSASELLKDPFFSE 286
+ + P AR + ++ KD ++++
Sbjct: 244 ILVENPSARITIPDIKKDRWYNK 266
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 120/270 (44%), Gaps = 25/270 (9%)
Query: 19 VDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQL 78
+DPS + +GSG V+ + + +VA +R SE+ + E ++
Sbjct: 4 IDPSEL--TFVQEIGSGQFGLVHLGYWLNKD-KVAIKTIREGAMSEEDFI-----EEAEV 55
Query: 79 LRTLKNKYIIVCYSVWLDDQHNTL--NFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQV 136
+ L + ++ Y V L+ L F+ C S LRT R + + L V
Sbjct: 56 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDV 112
Query: 137 LEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP--- 193
EG+ YL E C+IHRDL N + N +K+ D G V S GT
Sbjct: 113 CEGMAYLE--EACVIHRDLAARNCLVGEN-QVIKVSDFGMTRFVLDDQYTSS-TGTKFPV 168
Query: 194 EYMAPELYE-EDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGVKPQALN 251
++ +PE++ Y+ D++SFG+ + E+ + +IPY E S +++ + ++ G +
Sbjct: 169 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY-ENRSNSEVVEDISTGFRLYK-P 226
Query: 252 KVKDPEVKAFIEKCIAQ-PRARPSASELLK 280
++ V + C + P RP+ S LL+
Sbjct: 227 RLASTHVYQIMNHCWKERPEDRPAFSRLLR 256
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 100 NTLNFITEVCTSGNLRTYRKKHRH-VSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
N + I E+CT G LR++ + + + + +L ++ Q+ L YL + +HRD+
Sbjct: 463 NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR--FVHRDIAAR 520
Query: 159 NIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP--EYMAPE-LYEEDYTEMVDIYSFG 215
N+ ++ N VK+GD G + + S + G ++MAPE + +T D++ FG
Sbjct: 521 NVLVSSN-DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFG 579
Query: 216 LCLLEMVTMEI-PYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARP 273
+C+ E++ + P+ + I + G P N P + + + KC A P RP
Sbjct: 580 VCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN--CPPTLYSLMTKCWAYDPSRRP 637
Query: 274 SASEL 278
+EL
Sbjct: 638 RFTEL 642
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG+G +V+ + +VA ++ S D L +E L++ L+++ ++ Y
Sbjct: 21 LGAGQFGEVWMGYYNGH-TKVAVKSLKQGSMSPDAFL-----AEANLMKQLQHQRLVRLY 74
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHV--SIKALKKWSKQVLEGLEYLHTHEPC 149
+V + ITE +G+L + K + +I L + Q+ EG+ ++ E
Sbjct: 75 AV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 129
Query: 150 IIHRDLNCSNIFINGNIGQVKIGDLGFAAIV------GRSHAAHSIIGTPEYMAPE-LYE 202
IHRDL +NI ++ + KI D G A ++ R A I ++ APE +
Sbjct: 130 YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGAKFPI----KWTAPEAINY 184
Query: 203 EDYTEMVDIYSFGLCLLEMVTM-EIPY 228
+T D++SFG+ L E+VT IPY
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 18/263 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA +V A ++ VA V + + P + E+ + + L ++ ++ Y
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP---ENIKKEICINKMLNHENVVKFY 71
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ N E C+ G L + + +++ Q++ G+ YLH I
Sbjct: 72 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI--GIT 127
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELYE--EDYT 206
HRD+ N+ ++ +KI D G A + R + + GT Y+APEL + E +
Sbjct: 128 HRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 207 EMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK--DPEVKAFIEK 264
E VD++S G+ L M+ E+P+ + + Y K LN K D A + K
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE--KKTYLNPWKKIDSAPLALLHK 244
Query: 265 CIAQ-PRARPSASELLKDPFFSE 286
+ + P AR + ++ KD ++++
Sbjct: 245 ILVENPSARITIPDIKKDRWYNK 267
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG+G +V+ + +VA ++ S D L +E L++ L+++ ++ Y
Sbjct: 23 LGAGQFGEVWMGYYNGH-TKVAVKSLKQGSMSPDAFL-----AEANLMKQLQHQRLVRLY 76
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHV--SIKALKKWSKQVLEGLEYLHTHEPC 149
+V + ITE +G+L + K + +I L + Q+ EG+ ++ E
Sbjct: 77 AV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 131
Query: 150 IIHRDLNCSNIFINGNIGQVKIGDLGFAAIV------GRSHAAHSIIGTPEYMAPE-LYE 202
IHRDL +NI ++ + KI D G A ++ R A I ++ APE +
Sbjct: 132 YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGAKFPI----KWTAPEAINY 186
Query: 203 EDYTEMVDIYSFGLCLLEMVTM-EIPY 228
+T D++SFG+ L E+VT IPY
Sbjct: 187 GTFTIKSDVWSFGILLTEIVTHGRIPY 213
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 95/198 (47%), Gaps = 8/198 (4%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG G VY A +++ +A + S ++ V ++L E+++ L++ I+ Y
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV-EHQLRREIEIQSHLRHPNILRMY 81
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ + D + + + E G L +KH + + +++ + L Y HE +I
Sbjct: 82 NYFHDRK--RIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHY--CHERKVI 137
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYE-EDYTEMVD 210
HRD+ N+ + G G++KI D G+ ++ S + GT +Y+ PE+ E + + E VD
Sbjct: 138 HRDIKPENLLM-GYKGELKIADFGW-SVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVD 195
Query: 211 IYSFGLCLLEMVTMEIPY 228
++ G+ E + P+
Sbjct: 196 LWCAGVLCYEFLVGMPPF 213
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 18/263 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA +V A ++ VA V + + P + E+ + + L ++ ++ Y
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP---ENIKKEICINKMLNHENVVKFY 70
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ N E C+ G L + + +++ Q++ G+ YLH I
Sbjct: 71 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI--GIT 126
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELYE--EDYT 206
HRD+ N+ ++ +KI D G A + R + + GT Y+APEL + E +
Sbjct: 127 HRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 207 EMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK--DPEVKAFIEK 264
E VD++S G+ L M+ E+P+ + + Y K LN K D A + K
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE--KKTYLNPWKKIDSAPLALLHK 243
Query: 265 CIAQ-PRARPSASELLKDPFFSE 286
+ + P AR + ++ KD ++++
Sbjct: 244 ILVENPSARITIPDIKKDRWYNK 266
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 18/263 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA +V A ++ VA V + + P + E+ + + L ++ ++ Y
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP---ENIKKEICINKMLNHENVVKFY 70
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ N E C+ G L + + +++ Q++ G+ YLH I
Sbjct: 71 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI--GIT 126
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELYE--EDYT 206
HRD+ N+ ++ +KI D G A + R + + GT Y+APEL + E +
Sbjct: 127 HRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 207 EMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK--DPEVKAFIEK 264
E VD++S G+ L M+ E+P+ + + Y K LN K D A + K
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE--KKTYLNPWKKIDSAPLALLHK 243
Query: 265 CIAQ-PRARPSASELLKDPFFSE 286
+ + P AR + ++ KD ++++
Sbjct: 244 ILVENPSARITIPDIKKDRWYNK 266
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG+G +V+ + +V + + V E L++TL++ ++ Y
Sbjct: 20 LGAGQFGEVWMGYYNNS------TKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLY 73
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHR--HVSIKALKKWSKQVLEGLEYLHTHEPC 149
+V ++ + ITE G+L + K V + L +S Q+ EG+ Y+
Sbjct: 74 AVVTKEE--PIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN-- 129
Query: 150 IIHRDLNCSNIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTP-EYMAPELYEED-YT 206
IHRDL +N+ ++ ++ KI D G A ++ + A P ++ APE +T
Sbjct: 130 YIHRDLRAANVLVSESL-MCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFT 188
Query: 207 EMVDIYSFGLCLLEMVTM-EIPY 228
+++SFG+ L E+VT +IPY
Sbjct: 189 IKSNVWSFGILLYEIVTYGKIPY 211
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 18/203 (8%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG+G +V+ + +VA ++ S D L +E L++ L+++ ++ Y
Sbjct: 31 LGAGQFGEVWMGYYNGH-TKVAVKSLKQGSMSPDAFL-----AEANLMKQLQHQRLVRLY 84
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHV--SIKALKKWSKQVLEGLEYLHTHEPC 149
+V + ITE +G+L + K + +I L + Q+ EG+ ++ E
Sbjct: 85 AV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 139
Query: 150 IIHRDLNCSNIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTP-EYMAPE-LYEEDYT 206
IHRDL +NI ++ + KI D G A ++ + A P ++ APE + +T
Sbjct: 140 YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 198
Query: 207 EMVDIYSFGLCLLEMVTM-EIPY 228
D++SFG+ L E+VT IPY
Sbjct: 199 IKSDVWSFGILLTEIVTHGRIPY 221
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 18/263 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA +V A ++ VA V + + P + E+ + + L ++ ++ Y
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP---ENIKKEICINKMLNHENVVKFY 71
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ N E C+ G L + + +++ Q++ G+ YLH I
Sbjct: 72 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI--GIT 127
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELYE--EDYT 206
HRD+ N+ ++ +KI D G A + R + + GT Y+APEL + E +
Sbjct: 128 HRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 207 EMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK--DPEVKAFIEK 264
E VD++S G+ L M+ E+P+ + + Y K LN K D A + K
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE--KKTYLNPWKKIDSAPLALLHK 244
Query: 265 CIAQ-PRARPSASELLKDPFFSE 286
+ + P AR + ++ KD ++++
Sbjct: 245 ILVENPSARITIPDIKKDRWYNK 267
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 18/263 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA +V A ++ VA V + + P + E+ + + L ++ ++ Y
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP---ENIKKEICINKMLNHENVVKFY 71
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ N E C+ G L + + +++ Q++ G+ YLH I
Sbjct: 72 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI--GIT 127
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELYE--EDYT 206
HRD+ N+ ++ +KI D G A + R + + GT Y+APEL + E +
Sbjct: 128 HRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 207 EMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK--DPEVKAFIEK 264
E VD++S G+ L M+ E+P+ + + Y K LN K D A + K
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE--KKTYLNPWKKIDSAPLALLHK 244
Query: 265 CIAQ-PRARPSASELLKDPFFSE 286
+ + P AR + ++ KD ++++
Sbjct: 245 ILVENPSARITIPDIKKDRWYNK 267
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 18/263 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA +V A ++ VA V + + P + E+ + + L ++ ++ Y
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP---ENIKKEICINKMLNHENVVKFY 71
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ N E C+ G L + + +++ Q++ G+ YLH I
Sbjct: 72 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI--GIT 127
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELYE--EDYT 206
HRD+ N+ ++ +KI D G A + R + + GT Y+APEL + E +
Sbjct: 128 HRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 207 EMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK--DPEVKAFIEK 264
E VD++S G+ L M+ E+P+ + + Y K LN K D A + K
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE--KKTYLNPWKKIDSAPLALLHK 244
Query: 265 CIAQ-PRARPSASELLKDPFFSE 286
+ + P AR + ++ KD ++++
Sbjct: 245 ILVENPSARITIPDIKKDRWYNK 267
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 18/263 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA +V A ++ VA V + + P + E+ + + L ++ ++ Y
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP---ENIKKEICINKMLNHENVVKFY 70
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ N E C+ G L + + +++ Q++ G+ YLH I
Sbjct: 71 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI--GIT 126
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELYE--EDYT 206
HRD+ N+ ++ +KI D G A + R + + GT Y+APEL + E +
Sbjct: 127 HRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 207 EMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK--DPEVKAFIEK 264
E VD++S G+ L M+ E+P+ + + Y K LN K D A + K
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE--KKTYLNPWKKIDSAPLALLHK 243
Query: 265 CIAQ-PRARPSASELLKDPFFSE 286
+ + P AR + ++ KD ++++
Sbjct: 244 ILVENPSARITIPDIKKDRWYNK 266
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 18/263 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA +V A ++ VA V + + P + E+ + + L ++ ++ Y
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP---ENIKKEICINKMLNHENVVKFY 70
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ N E C+ G L + + +++ Q++ G+ YLH I
Sbjct: 71 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI--GIT 126
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELYE--EDYT 206
HRD+ N+ ++ +KI D G A + R + + GT Y+APEL + E +
Sbjct: 127 HRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 207 EMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK--DPEVKAFIEK 264
E VD++S G+ L M+ E+P+ + + Y K LN K D A + K
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE--KKTYLNPWKKIDSAPLALLHK 243
Query: 265 CIAQ-PRARPSASELLKDPFFSE 286
+ + P AR + ++ KD ++++
Sbjct: 244 ILVENPSARITIPDIKKDRWYNK 266
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 95/198 (47%), Gaps = 8/198 (4%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG G VY A +++ +A + S ++ V ++L E+++ L++ I+ Y
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV-EHQLRREIEIQSHLRHPNILRMY 80
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ + D + + + E G L +KH + + +++ + L Y HE +I
Sbjct: 81 NYFHDRK--RIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHY--CHERKVI 136
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYE-EDYTEMVD 210
HRD+ N+ + G G++KI D G+ ++ S + GT +Y+ PE+ E + + E VD
Sbjct: 137 HRDIKPENLLM-GYKGELKIADFGW-SVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVD 194
Query: 211 IYSFGLCLLEMVTMEIPY 228
++ G+ E + P+
Sbjct: 195 LWCAGVLCYEFLVGMPPF 212
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 15/214 (7%)
Query: 80 RTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEG 139
R+L++ I+ V L H L + E + G L S + + +Q++ G
Sbjct: 69 RSLRHPNIVRFKEVILTPTH--LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG 126
Query: 140 LEYLHTHEPCIIHRDLNCSNIFINGNIG-QVKIGDLGFAAIVGRSHAAHSIIGTPEYMAP 198
+ Y H + C HRDL N ++G+ ++KI D G++ S +GTP Y+AP
Sbjct: 127 VSYCHAMQVC--HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAP 184
Query: 199 E-LYEEDYT-EMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKD- 255
E L +++Y ++ D++S G+ L M+ P+ + + K + + Q + D
Sbjct: 185 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQY--AIPDY 242
Query: 256 ----PEVKAFIEKC-IAQPRARPSASELLKDPFF 284
PE + I + +A P R S E+ +F
Sbjct: 243 VHISPECRHLISRIFVADPAKRISIPEIRNHEWF 276
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 120/270 (44%), Gaps = 25/270 (9%)
Query: 19 VDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQL 78
+DPS + +GSG V+ + + +VA +R SE+ + E ++
Sbjct: 2 IDPSEL--TFVQEIGSGQFGLVHLGYWLNKD-KVAIKTIREGAMSEEDFI-----EEAEV 53
Query: 79 LRTLKNKYIIVCYSVWLDDQHNTL--NFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQV 136
+ L + ++ Y V L+ L F+ C S LRT R + + L V
Sbjct: 54 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDV 110
Query: 137 LEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP--- 193
EG+ YL E C+IHRDL N + N +K+ D G V S GT
Sbjct: 111 CEGMAYLE--EACVIHRDLAARNCLVGEN-QVIKVSDFGMTRFVLDDQYTSS-TGTKFPV 166
Query: 194 EYMAPELYE-EDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGVKPQALN 251
++ +PE++ Y+ D++SFG+ + E+ + +IPY E S +++ + ++ G +
Sbjct: 167 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY-ENRSNSEVVEDISTGFRLYK-P 224
Query: 252 KVKDPEVKAFIEKCIAQ-PRARPSASELLK 280
++ V + C + P RP+ S LL+
Sbjct: 225 RLASTHVYQIMNHCWKERPEDRPAFSRLLR 254
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 18/263 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA +V A ++ VA V + + P + E+ + + L ++ ++ Y
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP---ENIKKEICINKMLNHENVVKFY 71
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ N E C+ G L + + +++ Q++ G+ YLH I
Sbjct: 72 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI--GIT 127
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELYE--EDYT 206
HRD+ N+ ++ +KI D G A + R + + GT Y+APEL + E +
Sbjct: 128 HRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 207 EMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK--DPEVKAFIEK 264
E VD++S G+ L M+ E+P+ + + Y K LN K D A + K
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE--KKTYLNPWKKIDSAPLALLHK 244
Query: 265 CIAQ-PRARPSASELLKDPFFSE 286
+ + P AR + ++ KD ++++
Sbjct: 245 ILVENPSARITIPDIKKDRWYNK 267
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG+G +V+ + +VA ++ S D L +E L++ L+++ ++ Y
Sbjct: 22 LGAGQFGEVWMGYYNGH-TKVAVKSLKQGSMSPDAFL-----AEANLMKQLQHQRLVRLY 75
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHV--SIKALKKWSKQVLEGLEYLHTHEPC 149
+V + ITE +G+L + K + +I L + Q+ EG+ ++ E
Sbjct: 76 AV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 130
Query: 150 IIHRDLNCSNIFINGNIGQVKIGDLGFAAIV------GRSHAAHSIIGTPEYMAPE-LYE 202
IHRDL +NI ++ + KI D G A ++ R A I ++ APE +
Sbjct: 131 YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGAKFPI----KWTAPEAINY 185
Query: 203 EDYTEMVDIYSFGLCLLEMVTM-EIPY 228
+T D++SFG+ L E+VT IPY
Sbjct: 186 GTFTIKSDVWSFGILLTEIVTHGRIPY 212
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 18/263 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA +V A ++ VA V + + P + E+ + + L ++ ++ Y
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP---ENIKKEICINKMLNHENVVKFY 71
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ N E C+ G L + + +++ Q++ G+ YLH I
Sbjct: 72 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI--GIT 127
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELYE--EDYT 206
HRD+ N+ ++ +KI D G A + R + + GT Y+APEL + E +
Sbjct: 128 HRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 207 EMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK--DPEVKAFIEK 264
E VD++S G+ L M+ E+P+ + + Y K LN K D A + K
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE--KKTYLNPWKKIDSAPLALLHK 244
Query: 265 CIAQ-PRARPSASELLKDPFFSE 286
+ + P AR + ++ KD ++++
Sbjct: 245 ILVENPSARITIPDIKKDRWYNK 267
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 18/203 (8%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG+G +V+ + +VA ++ S D L +E L++ L+++ ++ Y
Sbjct: 16 LGAGQFGEVWMGYYNGH-TKVAVKSLKQGSMSPDAFL-----AEANLMKQLQHQRLVRLY 69
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHV--SIKALKKWSKQVLEGLEYLHTHEPC 149
+V + ITE +G+L + K + +I L + Q+ EG+ ++ E
Sbjct: 70 AV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 124
Query: 150 IIHRDLNCSNIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTP-EYMAPE-LYEEDYT 206
IHRDL +NI ++ + KI D G A ++ + A P ++ APE + +T
Sbjct: 125 YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 183
Query: 207 EMVDIYSFGLCLLEMVTM-EIPY 228
D++SFG+ L E+VT IPY
Sbjct: 184 IKSDVWSFGILLTEIVTHGRIPY 206
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG+G +V+ + +VA ++ S D L +E L++ L+++ ++ Y
Sbjct: 21 LGAGQFGEVWMGYYNGH-TKVAVKSLKQGSMSPDAFL-----AEANLMKQLQHQRLVRLY 74
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHV--SIKALKKWSKQVLEGLEYLHTHEPC 149
+V + ITE +G+L + K + +I L + Q+ EG+ ++ E
Sbjct: 75 AV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 129
Query: 150 IIHRDLNCSNIFINGNIGQVKIGDLGFAAIV------GRSHAAHSIIGTPEYMAPE-LYE 202
IHRDL +NI ++ + KI D G A ++ R A I ++ APE +
Sbjct: 130 YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGAKFPI----KWTAPEAINY 184
Query: 203 EDYTEMVDIYSFGLCLLEMVTM-EIPY 228
+T D++SFG+ L E+VT IPY
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 110/249 (44%), Gaps = 27/249 (10%)
Query: 29 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYII 88
SD+LG GA V+R ++ G A F PV V E ++L+ L +K I+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR-PVDVQM--REFEVLKKLNHKNIV 70
Query: 89 VCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWS---KQVLEGLEYLHT 145
+++ + I E C G+L T ++ + ++ + V+ G+ H
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMN--HL 128
Query: 146 HEPCIIHRDLNCSNIF-INGNIGQ--VKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYE 202
E I+HR++ NI + G GQ K+ D G A + S+ GT EY+ P++YE
Sbjct: 129 RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYE 188
Query: 203 ---------EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAK----IYKKVTGGVKPQ- 248
+ Y VD++S G+ T +P+ + + +YK +TG KP
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG--KPSG 246
Query: 249 ALNKVKDPE 257
A++ V+ E
Sbjct: 247 AISGVQKAE 255
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 18/203 (8%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG+G +V+ + +VA ++ S D L +E L++ L+++ ++ Y
Sbjct: 27 LGAGQFGEVWMGYYNGH-TKVAVKSLKQGSMSPDAFL-----AEANLMKQLQHQRLVRLY 80
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHV--SIKALKKWSKQVLEGLEYLHTHEPC 149
+V + ITE +G+L + K + +I L + Q+ EG+ ++ E
Sbjct: 81 AV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 135
Query: 150 IIHRDLNCSNIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTP-EYMAPE-LYEEDYT 206
IHRDL +NI ++ + KI D G A ++ + A P ++ APE + +T
Sbjct: 136 YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 194
Query: 207 EMVDIYSFGLCLLEMVTM-EIPY 228
D++SFG+ L E+VT IPY
Sbjct: 195 IKSDVWSFGILLTEIVTHGRIPY 217
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 18/203 (8%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG+G +V+ + +VA ++ S D L +E L++ L+++ ++ Y
Sbjct: 26 LGAGQFGEVWMGYYNGH-TKVAVKSLKQGSMSPDAFL-----AEANLMKQLQHQRLVRLY 79
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHV--SIKALKKWSKQVLEGLEYLHTHEPC 149
+V + ITE +G+L + K + +I L + Q+ EG+ ++ E
Sbjct: 80 AV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 134
Query: 150 IIHRDLNCSNIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTP-EYMAPE-LYEEDYT 206
IHRDL +NI ++ + KI D G A ++ + A P ++ APE + +T
Sbjct: 135 YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 193
Query: 207 EMVDIYSFGLCLLEMVTM-EIPY 228
D++SFG+ L E+VT IPY
Sbjct: 194 IKSDVWSFGILLTEIVTHGRIPY 216
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 18/203 (8%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG+G +V+ + +VA ++ S D L +E L++ L+++ ++ Y
Sbjct: 21 LGAGQFGEVWMGYYNGH-TKVAVKSLKQGSMSPDAFL-----AEANLMKQLQHQRLVRLY 74
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHV--SIKALKKWSKQVLEGLEYLHTHEPC 149
+V + ITE +G+L + K + +I L + Q+ EG+ ++ E
Sbjct: 75 AV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 129
Query: 150 IIHRDLNCSNIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTP-EYMAPE-LYEEDYT 206
IHRDL +NI ++ + KI D G A ++ + A P ++ APE + +T
Sbjct: 130 YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 188
Query: 207 EMVDIYSFGLCLLEMVTM-EIPY 228
D++SFG+ L E+VT IPY
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPY 211
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 109/227 (48%), Gaps = 27/227 (11%)
Query: 28 YSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
+ ++LGSGA +V+ + G A ++ S D L N E+ +L+ +K++ I
Sbjct: 13 FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLEN----EIAVLKKIKHENI 68
Query: 88 IVCYSVWLDDQHNTLNFITEVCTSGNL-------RTYRKKHRHVSIKALKKWSKQVLEGL 140
+ ++ H L + ++ + G L Y +K + I+ QVL +
Sbjct: 69 VTLEDIYESTTHYYL--VMQLVSGGELFDRILERGVYTEKDASLVIQ-------QVLSAV 119
Query: 141 EYLHTHEPCIIHRDLNCSNI--FINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAP 198
+YLH E I+HRDL N+ ++ I D G + + ++ + GTP Y+AP
Sbjct: 120 KYLH--ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM-EQNGIMSTACGTPGYVAP 176
Query: 199 E-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG 244
E L ++ Y++ VD +S G+ ++ P+ E ++ +K+++K+ G
Sbjct: 177 EVLAQKPYSKAVDCWSIGVITYILLCGYPPFYE-ETESKLFEKIKEG 222
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 18/263 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA +V A ++ VA V + + P + E+ + + L ++ ++ Y
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP---ENIKKEICINKMLNHENVVKFY 70
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ N E C+ G L + + +++ Q++ G+ YLH I
Sbjct: 71 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI--GIT 126
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELYE--EDYT 206
HRD+ N+ ++ +KI D G A + R + + GT Y+APEL + E +
Sbjct: 127 HRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 207 EMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK--DPEVKAFIEK 264
E VD++S G+ L M+ E+P+ + + Y K LN K D A + K
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE--KKTYLNPWKKIDSAPLALLHK 243
Query: 265 CIAQ-PRARPSASELLKDPFFSE 286
+ + P AR + ++ KD ++++
Sbjct: 244 ILVENPSARITIPDIKKDRWYNK 266
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 18/263 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA +V A ++ VA V + + P + E+ + + L ++ ++ Y
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP---ENIKKEICINKMLNHENVVKFY 69
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ N E C+ G L + + +++ Q++ G+ YLH I
Sbjct: 70 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI--GIT 125
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELYE--EDYT 206
HRD+ N+ ++ +KI D G A + R + + GT Y+APEL + E +
Sbjct: 126 HRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 184
Query: 207 EMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK--DPEVKAFIEK 264
E VD++S G+ L M+ E+P+ + + Y K LN K D A + K
Sbjct: 185 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE--KKTYLNPWKKIDSAPLALLHK 242
Query: 265 CIAQ-PRARPSASELLKDPFFSE 286
+ + P AR + ++ KD ++++
Sbjct: 243 ILVENPSARITIPDIKKDRWYNK 265
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 22/221 (9%)
Query: 78 LLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVL 137
LLR ++ II V+ D ++ + +TE+ G L + + S + +
Sbjct: 69 LLRYGQHPNIITLKDVYDDGKY--VYVVTELXKGGELLDKILRQKFFSEREASAVLFTIT 126
Query: 138 EGLEYLHTHEPCIIHRDLNCSNIFI---NGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPE 194
+ +EYLH ++HRDL SNI +GN ++I D GFA + A + ++ TP
Sbjct: 127 KTVEYLHAQ--GVVHRDLKPSNILYVDESGNPESIRICDFGFAK---QLRAENGLLXTPC 181
Query: 195 Y----MAPELYE-EDYTEMVDIYSFGLCLLEMVTMEIPYSEC--DSVAKIYKKVTGG--- 244
Y +APE+ E + Y DI+S G+ L +T P++ D+ +I ++ G
Sbjct: 182 YTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFS 241
Query: 245 VKPQALNKVKDPEVKAFIEKCI-AQPRARPSASELLKDPFF 284
+ N V D K + K + P R +A+ +L+ P+
Sbjct: 242 LSGGYWNSVSD-TAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 18/263 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA +V A ++ VA V + + P + E+ + + L ++ ++ Y
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP---ENIKKEICINKMLNHENVVKFY 70
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ N E C+ G L + + +++ Q++ G+ YLH I
Sbjct: 71 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI--GIT 126
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELYE--EDYT 206
HRD+ N+ ++ +KI D G A + R + + GT Y+APEL + E +
Sbjct: 127 HRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 207 EMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK--DPEVKAFIEK 264
E VD++S G+ L M+ E+P+ + + Y K LN K D A + K
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKE--KKTYLNPWKKIDSAPLALLHK 243
Query: 265 CIAQ-PRARPSASELLKDPFFSE 286
+ + P AR + ++ KD ++++
Sbjct: 244 ILVENPSARITIPDIKKDRWYNK 266
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 18/263 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA +V A ++ VA V + + P + E+ + + L ++ ++ Y
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP---ENIKKEICINKMLNHENVVKFY 70
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ N E C+ G L + + +++ Q++ G+ YLH I
Sbjct: 71 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI--GIT 126
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELYE--EDYT 206
HRD+ N+ ++ +KI D G A + R + + GT Y+APEL + E +
Sbjct: 127 HRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 207 EMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK--DPEVKAFIEK 264
E VD++S G+ L M+ E+P+ + + Y K LN K D A + K
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE--KKTYLNPWKKIDSAPLALLHK 243
Query: 265 CIAQ-PRARPSASELLKDPFFSE 286
+ + P AR + ++ KD ++++
Sbjct: 244 ILVENPSARITIPDIKKDRWYNK 266
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 115/257 (44%), Gaps = 23/257 (8%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+GSG V+ + + +VA +R SE+ + E +++ L + ++ Y
Sbjct: 18 IGSGQFGLVHLGYWLNKD-KVAIKTIREGAMSEEDFI-----EEAEVMMKLSHPKLVQLY 71
Query: 92 SVWLDDQHNTL--NFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPC 149
V L+ L F+ C S LRT R + + L V EG+ YL E C
Sbjct: 72 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGMAYLE--EAC 126
Query: 150 IIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---EYMAPELYE-EDY 205
+IHRDL N + N +K+ D G V S GT ++ +PE++ Y
Sbjct: 127 VIHRDLAARNCLVGEN-QVIKVSDFGMTRFVLDDQYTSS-TGTKFPVKWASPEVFSFSRY 184
Query: 206 TEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK 264
+ D++SFG+ + E+ + +IPY E S +++ + ++ G + ++ V +
Sbjct: 185 SSKSDVWSFGVLMWEVFSEGKIPY-ENRSNSEVVEDISTGFRLYK-PRLASTHVYQIMNH 242
Query: 265 CIAQ-PRARPSASELLK 280
C + P RP+ S LL+
Sbjct: 243 CWRERPEDRPAFSRLLR 259
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 18/263 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA +V A ++ VA V + + P + E+ + + L ++ ++ Y
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP---ENIKKEICINKMLNHENVVKFY 70
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ N E C+ G L + + +++ Q++ G+ YLH I
Sbjct: 71 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI--GIT 126
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELYE--EDYT 206
HRD+ N+ ++ +KI D G A + R + + GT Y+APEL + E +
Sbjct: 127 HRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 207 EMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK--DPEVKAFIEK 264
E VD++S G+ L M+ E+P+ + + Y K LN K D A + K
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE--KKTYLNPWKKIDSAPLALLHK 243
Query: 265 CIAQ-PRARPSASELLKDPFFSE 286
+ + P AR + ++ KD ++++
Sbjct: 244 ILVENPSARITIPDIKKDRWYNK 266
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 15/214 (7%)
Query: 80 RTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEG 139
R+L++ I+ V L H L + E + G L S + + +Q++ G
Sbjct: 70 RSLRHPNIVRFKEVILTPTH--LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG 127
Query: 140 LEYLHTHEPCIIHRDLNCSNIFINGNIG-QVKIGDLGFAAIVGRSHAAHSIIGTPEYMAP 198
+ Y H + + HRDL N ++G+ ++KI D G++ S +GTP Y+AP
Sbjct: 128 VSYAHAMQ--VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAP 185
Query: 199 E-LYEEDYT-EMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKD- 255
E L +++Y ++ D++S G+ L M+ P+ + + K + + Q + D
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQY--AIPDY 243
Query: 256 ----PEVKAFIEKC-IAQPRARPSASELLKDPFF 284
PE + I + +A P R S E+ +F
Sbjct: 244 VHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 124/301 (41%), Gaps = 49/301 (16%)
Query: 20 DPSGRFGR----YSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED--PVLVNRLH 73
DP F R LG G KV +A + V + E+ P + L
Sbjct: 15 DPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLL 74
Query: 74 SEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHV--------- 124
SE +L+ + + ++I Y Q L I E G+LR + ++ R V
Sbjct: 75 SEFNVLKQVNHPHVIKLYGAC--SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132
Query: 125 ---------------SIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQV 169
++ L ++ Q+ +G++YL E ++HRDL NI + ++
Sbjct: 133 SRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA--EMSLVHRDLAARNILVAEG-RKM 189
Query: 170 KIGDLGFA-------AIVGRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGLCLLEM 221
KI D G + + V RS + ++MA E L++ YT D++SFG+ L E+
Sbjct: 190 KISDFGLSRDVYEEDSXVKRSQGRIPV----KWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
Query: 222 VTMEI-PYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIAQPRARPSASELLK 280
VT+ PY +++ + G + + + + + ++ +P RP +++ K
Sbjct: 246 VTLGGNPYPGIPP-ERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISK 304
Query: 281 D 281
D
Sbjct: 305 D 305
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 94/217 (43%), Gaps = 25/217 (11%)
Query: 29 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK-NKYI 87
S+LLG GA KV A + G E A + +R+ EV+ L + NK I
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSR----SRVFREVETLYQCQGNKNI 73
Query: 88 IVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHE 147
+ + DD L F E G++ + +K +H + + + + V L++LHT
Sbjct: 74 LELIEFFEDDTRFYLVF--EKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKG 131
Query: 148 PCIIHRDLNCSNIFING--NIGQVKIGDLGFAAIVGRSHAAHSII--------GTPEYMA 197
I HRDL NI + VKI D + + +++ I G+ EYMA
Sbjct: 132 --IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMA 189
Query: 198 PELYE------EDYTEMVDIYSFGLCLLEMVTMEIPY 228
PE+ E Y + D++S G+ L M++ P+
Sbjct: 190 PEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LGSG V + + Q + + L + + DP L + L +E +++ L N YI+
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ + + + E+ G L Y +++RHV K + + QV G++YL E +
Sbjct: 437 GIC---EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL--EESNFV 491
Query: 152 HRDLNCSNIFINGNIGQ--VKIGDLGFAAIV--------GRSHAAHSIIGTPEYMAPE-L 200
HRDL N+ + + Q KI D G + + ++H + ++ APE +
Sbjct: 492 HRDLAARNVLL---VTQHYAKISDFGLSKALRADENYYKAQTHGKWPV----KWYAPECI 544
Query: 201 YEEDYTEMVDIYSFGLCLLEMVTM-EIPY 228
++ D++SFG+ + E + + PY
Sbjct: 545 NYYKFSSKSDVWSFGVLMWEAFSYGQKPY 573
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LGSG V + + Q + + L + + DP L + L +E +++ L N YI+
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ + + + E+ G L Y +++RHV K + + QV G++YL E +
Sbjct: 438 GIC---EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL--EESNFV 492
Query: 152 HRDLNCSNIFINGNIGQ--VKIGDLGFAAIV--------GRSHAAHSIIGTPEYMAPE-L 200
HRDL N+ + + Q KI D G + + ++H + ++ APE +
Sbjct: 493 HRDLAARNVLL---VTQHYAKISDFGLSKALRADENYYKAQTHGKWPV----KWYAPECI 545
Query: 201 YEEDYTEMVDIYSFGLCLLEMVTM-EIPY 228
++ D++SFG+ + E + + PY
Sbjct: 546 NYYKFSSKSDVWSFGVLMWEAFSYGQKPY 574
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 85/188 (45%), Gaps = 13/188 (6%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG GA VYR +++G + + L + ++ +E+ +L L + II
Sbjct: 61 LGRGATSIVYRC--KQKGTQKPYALKVLKKTVDKKIV----RTEIGVLLRLSHPNIIKLK 114
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
++ + ++ + E+ T G L + + S + KQ+LE + YLH E I+
Sbjct: 115 EIF--ETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLH--ENGIV 170
Query: 152 HRDLNCSNIFINGNI--GQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEE-DYTEM 208
HRDL N+ +KI D G + IV ++ GTP Y APE+ Y
Sbjct: 171 HRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPE 230
Query: 209 VDIYSFGL 216
VD++S G+
Sbjct: 231 VDMWSVGI 238
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 27 RYSDLLGSGAVKKVYRA-FDQEEG--IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK 83
R + LG G+ V R +D G + VA ++ S+ P ++ EV + +L
Sbjct: 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQ-PEAMDDFIREVNAMHSLD 79
Query: 84 NKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEY 142
++ +I Y V L + +TE+ G+L +KH+ H + L +++ QV EG+ Y
Sbjct: 80 HRNLIRLYGVVLTP---PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 136
Query: 143 LHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPE-----YMA 197
L + IHRDL N+ + VKIGD G + ++ H ++ + A
Sbjct: 137 LESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQND-DHXVMQEHRKVPFAWCA 192
Query: 198 PE-LYEEDYTEMVDIYSFGLCLLEMVT 223
PE L ++ D + FG+ L EM T
Sbjct: 193 PESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 81/166 (48%), Gaps = 17/166 (10%)
Query: 131 KWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNI-GQVKIGDLGFA-AIVGRSHAAHS 188
K++ + G+ +LHT EP I LN ++ I+ ++ ++ + D+ F+ GR +A
Sbjct: 115 KFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYA--- 171
Query: 189 IIGTPEYMAPELY----EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG 244
P ++APE E+ D++SF + L E+VT E+P+++ ++ K G
Sbjct: 172 ----PAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEG 227
Query: 245 VKPQALNKVKDPEVKAFIEKCIAQ-PRARPSASELLKDPFFSELND 289
++P + P V ++ C+ + P RP ++ P ++ D
Sbjct: 228 LRPTIPPGI-SPHVSKLMKICMNEDPAKRPKFDMIV--PILEKMQD 270
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Query: 131 KWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAI---VGRSHAAH 187
K ++ G+ +LH + IHRD+ +NI ++ KI D G A ++
Sbjct: 137 KIAQGAANGINFLHENHH--IHRDIKSANILLDEAF-TAKISDFGLARASEKFAQTVMXS 193
Query: 188 SIIGTPEYMAPELYEEDYTEMVDIYSFGLCLLEMVT 223
I+GT YMAPE + T DIYSFG+ LLE++T
Sbjct: 194 RIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIIT 229
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 95/210 (45%), Gaps = 34/210 (16%)
Query: 97 DQHNTLNFITEVCTSGNLRTYRKKHRHVS-IKALKKWSKQVLE-------GLEYLHTHEP 148
D+ N + I + +GNL K+H + S + + +Q LE GL YLHT
Sbjct: 105 DERNEMILIYKYMENGNL----KRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR-- 158
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFA---AIVGRSHAAHSIIGTPEYMAPELY-EED 204
IIHRD+ NI ++ N KI D G + +G++H + GT Y+ PE + +
Sbjct: 159 AIIHRDVKSINILLDENFVP-KITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGR 217
Query: 205 YTEMVDIYSFGLCLLEM------VTMEIPYSECDSVAKIYKKVTGG-----VKPQALNKV 253
TE D+YSFG+ L E+ + +P + + G V P +K+
Sbjct: 218 LTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKI 277
Query: 254 KDPEVKAFIE---KCIA-QPRARPSASELL 279
+ ++ F + KC+A RPS ++L
Sbjct: 278 RPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 20/138 (14%)
Query: 102 LNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH------EPCIIHRDL 155
L IT+ +G+L Y K + K++ K + + GL +LHT +P I HRDL
Sbjct: 110 LYLITDYHENGSLYDYLKSTT-LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDL 168
Query: 156 NCSNIFINGNIGQVKIGDLGFAA-IVGRSHAA----HSIIGTPEYMAPELYEEDYTE--- 207
NI + N G I DLG A + ++ ++ +GT YM PE+ +E
Sbjct: 169 KSKNILVKKN-GTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHF 227
Query: 208 ----MVDIYSFGLCLLEM 221
M D+YSFGL L E+
Sbjct: 228 QSYIMADMYSFGLILWEV 245
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Query: 131 KWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAI---VGRSHAAH 187
K ++ G+ +LH + IHRD+ +NI ++ KI D G A ++
Sbjct: 137 KIAQGAANGINFLHENHH--IHRDIKSANILLDEAF-TAKISDFGLARASEKFAQTVMXX 193
Query: 188 SIIGTPEYMAPELYEEDYTEMVDIYSFGLCLLEMVT 223
I+GT YMAPE + T DIYSFG+ LLE++T
Sbjct: 194 RIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIIT 229
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 27 RYSDLLGSGAVKKVYRA-FDQEEG--IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK 83
R + LG G+ V R +D G + VA ++ S+ P ++ EV + +L
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQ-PEAMDDFIREVNAMHSLD 69
Query: 84 NKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEY 142
++ +I Y V L + +TE+ G+L +KH+ H + L +++ QV EG+ Y
Sbjct: 70 HRNLIRLYGVVLTP---PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 126
Query: 143 LHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPE-----YMA 197
L + IHRDL N+ + VKIGD G + ++ H ++ + A
Sbjct: 127 LESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQND-DHXVMQEHRKVPFAWCA 182
Query: 198 PE-LYEEDYTEMVDIYSFGLCLLEMVT 223
PE L ++ D + FG+ L EM T
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 27 RYSDLLGSGAVKKVYRA-FDQEEG--IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK 83
R + LG G+ V R +D G + VA ++ S+ P ++ EV + +L
Sbjct: 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQ-PEAMDDFIREVNAMHSLD 79
Query: 84 NKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEY 142
++ +I Y V L + +TE+ G+L +KH+ H + L +++ QV EG+ Y
Sbjct: 80 HRNLIRLYGVVLT---PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 136
Query: 143 LHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS---HAAHSIIGTP-EYMAP 198
L + IHRDL N+ + VKIGD G + ++ + P + AP
Sbjct: 137 LESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 193
Query: 199 E-LYEEDYTEMVDIYSFGLCLLEMVT 223
E L ++ D + FG+ L EM T
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 20/206 (9%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG G+ +V+R D++ G + A +VRL F + E+ L + I+ Y
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE---------ELVACAGLSSPRIVPLY 130
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ +N E+ G+L K+ + + Q LEGLEYLHT I+
Sbjct: 131 GA--VREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR--IL 186
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSII------GTPEYMAPELYEEDY 205
H D+ N+ ++ + + + D G A + S++ GT +MAPE+
Sbjct: 187 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 246
Query: 206 TEM-VDIYSFGLCLLEMVTMEIPYSE 230
+ VDI+S +L M+ P+++
Sbjct: 247 CDAKVDIWSSCCMMLHMLNGCHPWTQ 272
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 11/185 (5%)
Query: 100 NTLNFITEVCTSGNLRTYRKKHRH-VSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
N + I E+CT G LR++ + + + + +L ++ Q+ L YL + +HRD+
Sbjct: 83 NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR--FVHRDIAAR 140
Query: 159 NIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP--EYMAPE-LYEEDYTEMVDIYSFG 215
N+ ++ VK+GD G + + S + G ++MAPE + +T D++ FG
Sbjct: 141 NVLVSAT-DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFG 199
Query: 216 LCLLEMVTMEI-PYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARP 273
+C+ E++ + P+ + I + G P N P + + + KC A P RP
Sbjct: 200 VCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN--CPPTLYSLMTKCWAYDPSRRP 257
Query: 274 SASEL 278
+EL
Sbjct: 258 RFTEL 262
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 13/195 (6%)
Query: 100 NTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSN 159
N E C+ G L + + +++ Q++ G+ YLH I HRD+ N
Sbjct: 78 NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI--GITHRDIKPEN 135
Query: 160 IFINGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELYE--EDYTEMVDIYSF 214
+ ++ +KI D G A + R + + GT Y+APEL + E + E VD++S
Sbjct: 136 LLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 215 GLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK--DPEVKAFIEKCIAQ-PRA 271
G+ L M+ E+P+ + + Y K LN K D A + K + + P A
Sbjct: 195 GIVLTAMLAGELPWDQPSDSCQEYSDWKE--KKTYLNPWKKIDSAPLALLHKILVENPSA 252
Query: 272 RPSASELLKDPFFSE 286
R + ++ KD ++++
Sbjct: 253 RITIPDIKKDRWYNK 267
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 98/235 (41%), Gaps = 17/235 (7%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVC 90
+ G G V ++ G+ VA +V +DP NR +Q L L + I+
Sbjct: 30 MAGQGTFGTVQLGKEKSTGMSVAIKKV-----IQDPRFRNRELQIMQDLAVLHHPNIVQL 84
Query: 91 YSVWL-----DDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKA---LKKWSKQVLEGLEY 142
S + D + LN + E R R +R +K + Q++ +
Sbjct: 85 QSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGC 144
Query: 143 LHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELY- 201
LH + HRD+ N+ +N G +K+ D G A + S + I + Y APEL
Sbjct: 145 LHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIF 204
Query: 202 -EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYK--KVTGGVKPQALNKV 253
+ YT VDI+S G EM+ E + +S ++++ +V G + L K+
Sbjct: 205 GNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKL 259
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 124/297 (41%), Gaps = 41/297 (13%)
Query: 20 DPSGRFGR----YSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED--PVLVNRLH 73
DP F R LG G KV +A + V + E+ P + L
Sbjct: 15 DPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLL 74
Query: 74 SEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHV--------- 124
SE +L+ + + ++I Y Q L I E G+LR + ++ R V
Sbjct: 75 SEFNVLKQVNHPHVIKLYGAC--SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132
Query: 125 ---------------SIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQV 169
++ L ++ Q+ +G++YL E ++HRDL NI + ++
Sbjct: 133 SRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA--EMKLVHRDLAARNILVAEG-RKM 189
Query: 170 KIGDLGFAAIVGR--SHAAHSIIGTP-EYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTME 225
KI D G + V S+ S P ++MA E L++ YT D++SFG+ L E+VT+
Sbjct: 190 KISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 249
Query: 226 I-PYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIAQPRARPSASELLKD 281
PY +++ + G + + + + + ++ +P RP +++ KD
Sbjct: 250 GNPYPGIPP-ERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD 305
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 109/249 (43%), Gaps = 27/249 (10%)
Query: 29 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYII 88
SD+LG GA V+R ++ G A F PV V E ++L+ L +K I+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR-PVDVQM--REFEVLKKLNHKNIV 70
Query: 89 VCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWS---KQVLEGLEYLHT 145
+++ + I E C G+L T ++ + ++ + V+ G+ H
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMN--HL 128
Query: 146 HEPCIIHRDLNCSNIF-INGNIGQ--VKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYE 202
E I+HR++ NI + G GQ K+ D G A + + GT EY+ P++YE
Sbjct: 129 RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYE 188
Query: 203 ---------EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAK----IYKKVTGGVKPQ- 248
+ Y VD++S G+ T +P+ + + +YK +TG KP
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG--KPSG 246
Query: 249 ALNKVKDPE 257
A++ V+ E
Sbjct: 247 AISGVQKAE 255
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 85/174 (48%), Gaps = 14/174 (8%)
Query: 75 EVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSK 134
E ++ + +++ + + DD++ L + E G+L + V K K ++
Sbjct: 125 ERDIMAFANSPWVVQLFCAFQDDKY--LYMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTA 181
Query: 135 QVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAH--SIIGT 192
+V+ L+ +H+ +IHRD+ N+ ++ + G +K+ D G + + H + +GT
Sbjct: 182 EVVLALDAIHSM--GLIHRDVKPDNMLLDKH-GHLKLADFGTCMKMDETGMVHCDTAVGT 238
Query: 193 PEYMAPELYEED-----YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV 241
P+Y++PE+ + Y D +S G+ L EM+ + P+ DS+ Y K+
Sbjct: 239 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFY-ADSLVGTYSKI 291
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 124/301 (41%), Gaps = 49/301 (16%)
Query: 20 DPSGRFGR----YSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED--PVLVNRLH 73
DP F R LG G KV +A + V + E+ P + L
Sbjct: 15 DPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLL 74
Query: 74 SEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHV--------- 124
SE +L+ + + ++I Y Q L I E G+LR + ++ R V
Sbjct: 75 SEFNVLKQVNHPHVIKLYGAC--SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132
Query: 125 ---------------SIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQV 169
++ L ++ Q+ +G++YL E ++HRDL NI + ++
Sbjct: 133 SRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA--EMKLVHRDLAARNILVAEG-RKM 189
Query: 170 KIGDLGFA-------AIVGRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGLCLLEM 221
KI D G + + V RS + ++MA E L++ YT D++SFG+ L E+
Sbjct: 190 KISDFGLSRDVYEEDSXVKRSQGRIPV----KWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
Query: 222 VTMEI-PYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIAQPRARPSASELLK 280
VT+ PY +++ + G + + + + + ++ +P RP +++ K
Sbjct: 246 VTLGGNPYPGIPP-ERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISK 304
Query: 281 D 281
D
Sbjct: 305 D 305
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LGSG V + + Q + + L + + DP L + L +E +++ L N YI+
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ + + + E+ G L Y +++RHV K + + QV G++YL E +
Sbjct: 95 GI---CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL--EESNFV 149
Query: 152 HRDLNCSNIFINGNIGQ--VKIGDLGFAAIV--------GRSHAAHSIIGTPEYMAPE-L 200
HRDL N+ + + Q KI D G + + ++H + ++ APE +
Sbjct: 150 HRDLAARNVLL---VTQHYAKISDFGLSKALRADENYYKAQTHGKWPV----KWYAPECI 202
Query: 201 YEEDYTEMVDIYSFGLCLLE 220
++ D++SFG+ + E
Sbjct: 203 NYYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LGSG V + + Q + + L + + DP L + L +E +++ L N YI+
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ + + + E+ G L Y +++RHV K + + QV G++YL E +
Sbjct: 95 GI---CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL--EESNFV 149
Query: 152 HRDLNCSNIFINGNIGQ--VKIGDLGFAAIV--------GRSHAAHSIIGTPEYMAPE-L 200
HRDL N+ + + Q KI D G + + ++H + ++ APE +
Sbjct: 150 HRDLAARNVLL---VTQHYAKISDFGLSKALRADENYYKAQTHGKWPV----KWYAPECI 202
Query: 201 YEEDYTEMVDIYSFGLCLLE 220
++ D++SFG+ + E
Sbjct: 203 NYYKFSSKSDVWSFGVLMWE 222
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 27 RYSDLLGSGAVKKVYRA-FDQEEG--IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK 83
R + LG G+ V R +D G + VA ++ S+ P ++ EV + +L
Sbjct: 15 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQ-PEAMDDFIREVNAMHSLD 73
Query: 84 NKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEY 142
++ +I Y V L + +TE+ G+L +KH+ H + L +++ QV EG+ Y
Sbjct: 74 HRNLIRLYGVVLTP---PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 130
Query: 143 LHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS---HAAHSIIGTP-EYMAP 198
L + IHRDL N+ + VKIGD G + ++ + P + AP
Sbjct: 131 LESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
Query: 199 E-LYEEDYTEMVDIYSFGLCLLEMVT 223
E L ++ D + FG+ L EM T
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 87/212 (41%), Gaps = 21/212 (9%)
Query: 94 WLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHR 153
W + Q + + + +L Y + + + + QV+ ++ H H ++HR
Sbjct: 106 WFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQ--HCHSRGVVHR 163
Query: 154 DLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE-LYEEDYTEM-VDI 211
D+ NI I+ G K+ D G A++ GT Y PE + Y + +
Sbjct: 164 DIKDENILIDLRRGCAKLIDFGSGALL-HDEPYTDFDGTRVYSPPEWISRHQYHALPATV 222
Query: 212 YSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPR 270
+S G+ L +MV +IP+ + + V P+ A I +C+A +P
Sbjct: 223 WSLGILLYDMVCGDIPFERDQEILEAELHFPAHVS---------PDCCALIRRCLAPKPS 273
Query: 271 ARPSASELLKDPFFS------ELNDDDSEPSP 296
+RPS E+L DP+ LN P+P
Sbjct: 274 SRPSLEEILLDPWMQTPAEDVPLNPSKGGPAP 305
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 27 RYSDLLGSGAVKKVYRA-FDQEEG--IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK 83
R + LG G+ V R +D G + VA ++ S+ P ++ EV + +L
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQ-PEAMDDFIREVNAMHSLD 69
Query: 84 NKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEY 142
++ +I Y V L + +TE+ G+L +KH+ H + L +++ QV EG+ Y
Sbjct: 70 HRNLIRLYGVVLT---PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 126
Query: 143 LHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS---HAAHSIIGTP-EYMAP 198
L + IHRDL N+ + VKIGD G + ++ + P + AP
Sbjct: 127 LESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
Query: 199 E-LYEEDYTEMVDIYSFGLCLLEMVT 223
E L ++ D + FG+ L EM T
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LGSG V + + Q + + L + + DP L + L +E +++ L N YI+
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ + + + E+ G L Y +++RHV K + + QV G++YL E +
Sbjct: 93 GI---CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL--EESNFV 147
Query: 152 HRDLNCSNIFINGNIGQ--VKIGDLGFAAIV--------GRSHAAHSIIGTPEYMAPE-L 200
HRDL N+ + + Q KI D G + + ++H + ++ APE +
Sbjct: 148 HRDLAARNVLL---VTQHYAKISDFGLSKALRADENYYKAQTHGKWPV----KWYAPECI 200
Query: 201 YEEDYTEMVDIYSFGLCLLEMVT 223
++ D++SFG+ + E +
Sbjct: 201 NYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 132/302 (43%), Gaps = 50/302 (16%)
Query: 27 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRL------SHFSEDPVLVNRLHSEVQLLR 80
++ LG+GA KV A G E A +V + +H E L+ SE++++
Sbjct: 34 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM----SELKIMS 89
Query: 81 TLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKH------------------- 121
L IV + + ITE C G+L + ++
Sbjct: 90 HLGQHENIVNL-LGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLD 148
Query: 122 ----RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFI-NGNIGQVKIGDLGF 176
R + ++ L +S QV +G+ +L + IHRD+ N+ + NG++ KIGD G
Sbjct: 149 KEDGRPLELRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHVA--KIGDFGL 204
Query: 177 AAIVGRSHAAHSIIGTP----EYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEI-PYSE 230
A + + + + + G ++MAPE +++ YT D++S+G+ L E+ ++ + PY
Sbjct: 205 ARDI-MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 263
Query: 231 CDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELND 289
+K YK V G + A + + ++ C A +P RP+ ++ F E
Sbjct: 264 ILVNSKFYKLVKDGYQ-MAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS--FLQEQAQ 320
Query: 290 DD 291
+D
Sbjct: 321 ED 322
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LGSG V + + Q + + L + + DP L + L +E +++ L N YI+
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ + + + E+ G L Y +++RHV K + + QV G++YL E +
Sbjct: 79 GI---CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL--EESNFV 133
Query: 152 HRDLNCSNIFINGNIGQ--VKIGDLGFAAIV--------GRSHAAHSIIGTPEYMAPE-L 200
HRDL N+ + + Q KI D G + + ++H + ++ APE +
Sbjct: 134 HRDLAARNVLL---VTQHYAKISDFGLSKALRADENXYKAQTHGKWPV----KWYAPECI 186
Query: 201 YEEDYTEMVDIYSFGLCLLE 220
++ D++SFG+ + E
Sbjct: 187 NYYKFSSKSDVWSFGVLMWE 206
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 20/206 (9%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG G+ +V+R D++ G + A +VRL F + E+ L + I+ Y
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE---------ELMACAGLTSPRIVPLY 132
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ +N E+ G+L K+ + + Q LEGLEYLH+ I+
Sbjct: 133 GAVREGP--WVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRR--IL 188
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSII------GTPEYMAPE-LYEED 204
H D+ N+ ++ + + D G A + ++ GT +MAPE +
Sbjct: 189 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRS 248
Query: 205 YTEMVDIYSFGLCLLEMVTMEIPYSE 230
VD++S +L M+ P+++
Sbjct: 249 CDAKVDVWSSCCMMLHMLNGCHPWTQ 274
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 83/189 (43%), Gaps = 33/189 (17%)
Query: 46 QEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 105
Q++ +E + R+ + P + +LHS Q + + L F+
Sbjct: 59 QDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTV--------------------DRLYFV 98
Query: 106 TEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGN 165
E G+L + ++ ++ ++ GL +LH II+RDL N+ ++
Sbjct: 99 MEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKR--GIIYRDLKLDNVMLDSE 156
Query: 166 IGQVKIGDLGFAAIVGRSHAAHSII-----GTPEYMAPELYE-EDYTEMVDIYSFGLCLL 219
G +KI D G + H + GTP+Y+APE+ + Y + VD +++G+ L
Sbjct: 157 -GHIKIADFGMC----KEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLY 211
Query: 220 EMVTMEIPY 228
EM+ + P+
Sbjct: 212 EMLAGQPPF 220
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 27 RYSDLLGSGAVKKVYRA-FDQEEG--IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK 83
R + LG G+ V R +D G + VA ++ S+ P ++ EV + +L
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQ-PEAMDDFIREVNAMHSLD 69
Query: 84 NKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEY 142
++ +I Y V L + +TE+ G+L +KH+ H + L +++ QV EG+ Y
Sbjct: 70 HRNLIRLYGVVLTP---PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 126
Query: 143 LHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS---HAAHSIIGTP-EYMAP 198
L + IHRDL N+ + VKIGD G + ++ + P + AP
Sbjct: 127 LESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
Query: 199 E-LYEEDYTEMVDIYSFGLCLLEMVT 223
E L ++ D + FG+ L EM T
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 131 KWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAI---VGRSHAAH 187
K ++ G+ +LH + IHRD+ +NI ++ KI D G A +
Sbjct: 131 KIAQGAANGINFLHENHH--IHRDIKSANILLDEAF-TAKISDFGLARASEKFAQXVMXX 187
Query: 188 SIIGTPEYMAPELYEEDYTEMVDIYSFGLCLLEMVT 223
I+GT YMAPE + T DIYSFG+ LLE++T
Sbjct: 188 RIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIIT 223
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 98/212 (46%), Gaps = 9/212 (4%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG G VY A +++ +A +V E + ++L EV++ L++ I+ Y
Sbjct: 20 LGKGKFGNVYLARERQSKFILAL-KVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLY 78
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ D + I E G + +K + + ++ L Y H+ +I
Sbjct: 79 GYFHDA--TRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR--VI 134
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYE-EDYTEMVD 210
HRD+ N+ + N G++KI D G+ ++ S ++ GT +Y+ PE+ E + E VD
Sbjct: 135 HRDIKPENLLLGSN-GELKIADFGW-SVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVD 192
Query: 211 IYSFGLCLLEMVTMEIPYSECDSVAKIYKKVT 242
++S G+ E + P+ E + + Y++++
Sbjct: 193 LWSLGVLCYEFLVGMPPF-EAHTYQETYRRIS 223
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 27 RYSDLLGSGAVKKVYRA-FDQEEG--IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK 83
R + LG G+ V R +D G + VA ++ S+ P ++ EV + +L
Sbjct: 15 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQ-PEAMDDFIREVNAMHSLD 73
Query: 84 NKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEY 142
++ +I Y V L + +TE+ G+L +KH+ H + L +++ QV EG+ Y
Sbjct: 74 HRNLIRLYGVVLTP---PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 130
Query: 143 LHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS---HAAHSIIGTP-EYMAP 198
L + IHRDL N+ + VKIGD G + ++ + P + AP
Sbjct: 131 LESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
Query: 199 E-LYEEDYTEMVDIYSFGLCLLEMVT 223
E L ++ D + FG+ L EM T
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG+G +V+ + +VA ++ S D L +E L++ L+++ ++ Y
Sbjct: 17 LGAGQFGEVWMGYYNGH-TKVAVKSLKQGSMSPDAFL-----AEANLMKQLQHQRLVRLY 70
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHV--SIKALKKWSKQVLEGLEYLHTHEPC 149
+V + ITE +G+L + K + +I L + Q+ EG+ ++ E
Sbjct: 71 AV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 125
Query: 150 IIHRDLNCSNIFINGNIGQVKIGDLGFAAIV------GRSHAAHSIIGTPEYMAPE-LYE 202
IHR+L +NI ++ + KI D G A ++ R A I ++ APE +
Sbjct: 126 YIHRNLRAANILVSDTLS-CKIADFGLARLIEDNEYTAREGAKFPI----KWTAPEAINY 180
Query: 203 EDYTEMVDIYSFGLCLLEMVTM-EIPY 228
+T D++SFG+ L E+VT IPY
Sbjct: 181 GTFTIKSDVWSFGILLTEIVTHGRIPY 207
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LGSG V + + Q + + L + + DP L + L +E +++ L N YI+
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ + + + E+ G L Y +++RHV K + + QV G++YL E +
Sbjct: 79 GI---CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL--EESNFV 133
Query: 152 HRDLNCSNIFINGNIGQ--VKIGDLGFAAIV--------GRSHAAHSIIGTPEYMAPE-L 200
HRDL N+ + + Q KI D G + + ++H + ++ APE +
Sbjct: 134 HRDLAARNVLL---VTQHYAKISDFGLSKALRADENYYKAQTHGKWPV----KWYAPECI 186
Query: 201 YEEDYTEMVDIYSFGLCLLE 220
++ D++SFG+ + E
Sbjct: 187 NYYKFSSKSDVWSFGVLMWE 206
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 64/139 (46%), Gaps = 19/139 (13%)
Query: 102 LNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHT--------HEPCIIHR 153
L IT G+L + K + VS L ++ + GL YLH H+P I HR
Sbjct: 97 LWLITAFHEKGSLSDFLKANV-VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHR 155
Query: 154 DLNCSNIFINGNIGQVKIGDLGFAAI--VGRSHA-AHSIIGTPEYMAPEL------YEED 204
D+ N+ + N+ I D G A G+S H +GT YMAPE+ ++ D
Sbjct: 156 DIKSKNVLLKNNLTAC-IADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRD 214
Query: 205 YTEMVDIYSFGLCLLEMVT 223
+D+Y+ GL L E+ +
Sbjct: 215 AFLRIDMYAMGLVLWELAS 233
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 11/185 (5%)
Query: 100 NTLNFITEVCTSGNLRTYRKKHRH-VSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
N + I E+CT G LR++ + + + + +L ++ Q+ L YL + +HRD+
Sbjct: 463 NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR--FVHRDIAAR 520
Query: 159 NIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP--EYMAPE-LYEEDYTEMVDIYSFG 215
N+ ++ VK+GD G + + S + G ++MAPE + +T D++ FG
Sbjct: 521 NVLVSAT-DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFG 579
Query: 216 LCLLEMVTMEI-PYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARP 273
+C+ E++ + P+ + I + G P N P + + + KC A P RP
Sbjct: 580 VCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN--CPPTLYSLMTKCWAYDPSRRP 637
Query: 274 SASEL 278
+EL
Sbjct: 638 RFTEL 642
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 120/269 (44%), Gaps = 30/269 (11%)
Query: 29 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYII 88
+L+G G +VY + G EVA + + +ED + EV R +++ ++
Sbjct: 38 GELIGKGRFGQVYHG--RWHG-EVAIRLIDIERDNEDQL--KAFKREVMAYRQTRHENVV 92
Query: 89 VCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHV-SIKALKKWSKQVLEGLEYLHTHE 147
+ + H L IT +C L + + + V + ++ ++++++G+ YLH
Sbjct: 93 LFMGACMSPPH--LAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK- 149
Query: 148 PCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS------IIGTPEYMAPELY 201
I+H+DL N+F + G+V I D G +I G A G ++APE+
Sbjct: 150 -GILHKDLKSKNVFYDN--GKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEII 206
Query: 202 -------EED---YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALN 251
EED +++ D+++ G E+ E P+ + A I++ T G+KP
Sbjct: 207 RQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGT-GMKPNLSQ 265
Query: 252 KVKDPEVKAFIEKCIA-QPRARPSASELL 279
E+ + C A + RP+ ++L+
Sbjct: 266 IGMGKEISDILLFCWAFEQEERPTFTKLM 294
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 125/276 (45%), Gaps = 25/276 (9%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYII-- 88
+G G +V++A ++ G +VA +V + + E P+ R E+++L+ LK++ ++
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR---EIKILQLLKHENVVNL 82
Query: 89 --VCYSVW--LDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLH 144
+C + + ++ + + C ++ +K+ + +L GL Y+H
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 142
Query: 145 THEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAH-----SIIGTPEYMAPE 199
++ I+HRD+ +N+ I + G +K+ D G A + + + + T Y PE
Sbjct: 143 RNK--ILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 199
Query: 200 LY--EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDS---VAKIYKKVTGGVKPQALNKVK 254
L E DY +D++ G + EM T P + ++ + ++ G + P+ V
Sbjct: 200 LLLGERDYGPPIDLWGAGCIMAEMWTRS-PIMQGNTEQHQLALISQLCGSITPEVWPNVD 258
Query: 255 DPEVKAFIEKCIAQPR-ARPSASELLKDPFFSELND 289
+ E+ +E Q R + ++DP+ +L D
Sbjct: 259 NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLID 294
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 125/276 (45%), Gaps = 25/276 (9%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYII-- 88
+G G +V++A ++ G +VA +V + + E P+ R E+++L+ LK++ ++
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR---EIKILQLLKHENVVNL 82
Query: 89 --VCYSVW--LDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLH 144
+C + + ++ + + C ++ +K+ + +L GL Y+H
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 142
Query: 145 THEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAH-----SIIGTPEYMAPE 199
++ I+HRD+ +N+ I + G +K+ D G A + + + + T Y PE
Sbjct: 143 RNK--ILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 199
Query: 200 LY--EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDS---VAKIYKKVTGGVKPQALNKVK 254
L E DY +D++ G + EM T P + ++ + ++ G + P+ V
Sbjct: 200 LLLGERDYGPPIDLWGAGCIMAEMWTRS-PIMQGNTEQHQLALISQLCGSITPEVWPNVD 258
Query: 255 DPEVKAFIEKCIAQPR-ARPSASELLKDPFFSELND 289
+ E+ +E Q R + ++DP+ +L D
Sbjct: 259 NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLID 294
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 93/203 (45%), Gaps = 18/203 (8%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG+G +V+ A + +V + + V +E +++TL++ ++ +
Sbjct: 23 LGAGQFGEVWMATYNKH------TKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLH 76
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHR--HVSIKALKKWSKQVLEGLEYLHTHEPC 149
+V + ITE G+L + K + L +S Q+ EG+ ++
Sbjct: 77 AV---VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN-- 131
Query: 150 IIHRDLNCSNIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTP-EYMAPELYE-EDYT 206
IHRDL +NI ++ ++ KI D G A ++ + A P ++ APE +T
Sbjct: 132 YIHRDLRAANILVSASL-VCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT 190
Query: 207 EMVDIYSFGLCLLEMVTM-EIPY 228
D++SFG+ L+E+VT IPY
Sbjct: 191 IKSDVWSFGILLMEIVTYGRIPY 213
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 75 EVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRK--KHRHVSIKALKKW 132
E Q+++ LK+ ++ Y+V + +TE G+L + K + R + + L
Sbjct: 54 EAQIMKKLKHDKLVQLYAV---VSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDM 110
Query: 133 SKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV------GRSHAA 186
+ QV G+ Y+ IHRDL +NI + GN KI D G A ++ R A
Sbjct: 111 AAQVAAGMAYIERMN--YIHRDLRSANILV-GNGLICKIADFGLARLIEDNEXTARQGAK 167
Query: 187 HSIIGTPEYMAPE--LYEEDYTEMVDIYSFGLCLLEMVTM-EIPY 228
I ++ APE LY +T D++SFG+ L E+VT +PY
Sbjct: 168 FPI----KWTAPEAALYGR-FTIKSDVWSFGILLTELVTKGRVPY 207
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 97/212 (45%), Gaps = 9/212 (4%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG G VY A +++ +A +V E + ++L EV++ L++ I+ Y
Sbjct: 20 LGKGKFGNVYLARERQSKFILAL-KVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLY 78
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ D + I E G + +K + + ++ L Y H+ +I
Sbjct: 79 GYFHDA--TRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR--VI 134
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYE-EDYTEMVD 210
HRD+ N+ + N G++KI D G++ S ++ GT +Y+ PE+ E + E VD
Sbjct: 135 HRDIKPENLLLGSN-GELKIADFGWSVHAPSSRRT-TLCGTLDYLPPEMIEGRMHDEKVD 192
Query: 211 IYSFGLCLLEMVTMEIPYSECDSVAKIYKKVT 242
++S G+ E + P+ E + + Y++++
Sbjct: 193 LWSLGVLCYEFLVGMPPF-EAHTYQETYRRIS 223
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 125/276 (45%), Gaps = 25/276 (9%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYII-- 88
+G G +V++A ++ G +VA +V + + E P+ R E+++L+ LK++ ++
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR---EIKILQLLKHENVVNL 81
Query: 89 --VCYSVW--LDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLH 144
+C + + ++ + + C ++ +K+ + +L GL Y+H
Sbjct: 82 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 141
Query: 145 THEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAH-----SIIGTPEYMAPE 199
++ I+HRD+ +N+ I + G +K+ D G A + + + + T Y PE
Sbjct: 142 RNK--ILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 198
Query: 200 LY--EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDS---VAKIYKKVTGGVKPQALNKVK 254
L E DY +D++ G + EM T P + ++ + ++ G + P+ V
Sbjct: 199 LLLGERDYGPPIDLWGAGCIMAEMWTRS-PIMQGNTEQHQLALISQLCGSITPEVWPNVD 257
Query: 255 DPEVKAFIEKCIAQPR-ARPSASELLKDPFFSELND 289
+ E+ +E Q R + ++DP+ +L D
Sbjct: 258 NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLID 293
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 25/185 (13%)
Query: 46 QEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 105
Q++ +E + R+ P + +LHS Q + + L F+
Sbjct: 60 QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM--------------------DRLYFV 99
Query: 106 TEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGN 165
E G+L + ++ ++ ++ GL +L + II+RDL N+ ++
Sbjct: 100 MEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK--GIIYRDLKLDNVMLDSE 157
Query: 166 IGQVKIGDLGFAA-IVGRSHAAHSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVT 223
G +KI D G + GTP+Y+APE+ + Y + VD ++FG+ L EM+
Sbjct: 158 -GHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA 216
Query: 224 MEIPY 228
+ P+
Sbjct: 217 GQAPF 221
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 25/185 (13%)
Query: 46 QEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 105
Q++ +E + R+ P + +LHS Q + + L F+
Sbjct: 381 QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM--------------------DRLYFV 420
Query: 106 TEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGN 165
E G+L + ++ ++ ++ GL +L + II+RDL N+ ++
Sbjct: 421 MEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG--IIYRDLKLDNVMLDSE 478
Query: 166 IGQVKIGDLGFAA-IVGRSHAAHSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVT 223
G +KI D G + GTP+Y+APE+ + Y + VD ++FG+ L EM+
Sbjct: 479 -GHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA 537
Query: 224 MEIPY 228
+ P+
Sbjct: 538 GQAPF 542
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LGSG V + + Q + + L + + DP L + L +E +++ L N YI+
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ + + + E+ G L Y +++RHV K + + QV G++YL E +
Sbjct: 85 GI---CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL--EESNFV 139
Query: 152 HRDLNCSNIFINGNIGQ--VKIGDLGFAAIV--------GRSHAAHSIIGTPEYMAPE-L 200
HRDL N+ + + Q KI D G + + ++H + ++ APE +
Sbjct: 140 HRDLAARNVLL---VTQHYAKISDFGLSKALRADENYYKAQTHGKWPV----KWYAPECI 192
Query: 201 YEEDYTEMVDIYSFGLCLLE 220
++ D++SFG+ + E
Sbjct: 193 NYYKFSSKSDVWSFGVLMWE 212
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 20/206 (9%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+G G+ +V+R D++ G + A +VRL F + E+ L + I+ Y
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE---------ELVACAGLSSPRIVPLY 116
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ +N E+ G+L K+ + + Q LEGLEYLHT I+
Sbjct: 117 GA--VREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR--IL 172
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSII------GTPEYMAPELYEEDY 205
H D+ N+ ++ + + + D G A + S++ GT +MAPE+
Sbjct: 173 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 232
Query: 206 TEM-VDIYSFGLCLLEMVTMEIPYSE 230
+ VDI+S +L M+ P+++
Sbjct: 233 CDAKVDIWSSCCMMLHMLNGCHPWTQ 258
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LGSG V + + Q + + L + + DP L + L +E +++ L N YI+
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ + + + E+ G L Y +++RHV K + + QV G++YL E +
Sbjct: 73 GI---CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL--EESNFV 127
Query: 152 HRDLNCSNIFINGNIGQ--VKIGDLGFAAIV--------GRSHAAHSIIGTPEYMAPE-L 200
HRDL N+ + + Q KI D G + + ++H + ++ APE +
Sbjct: 128 HRDLAARNVLL---VTQHYAKISDFGLSKALRADENYYKAQTHGKWPV----KWYAPECI 180
Query: 201 YEEDYTEMVDIYSFGLCLLE 220
++ D++SFG+ + E
Sbjct: 181 NYYKFSSKSDVWSFGVLMWE 200
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 64/142 (45%), Gaps = 26/142 (18%)
Query: 104 FITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHT-------HEPCIIHRDLN 156
+ E +G+L Y H + + + + V GL YLHT ++P I HRDLN
Sbjct: 89 LVMEYYPNGSLXKYLSLHTSDWVSSCR-LAHSVTRGLAYLHTELPRGDHYKPAISHRDLN 147
Query: 157 CSNIFINGNIGQVKIGDLGFAA-IVG--------RSHAAHSIIGTPEYMAPELYE----- 202
N+ + N G I D G + + G +AA S +GT YMAPE+ E
Sbjct: 148 SRNVLVK-NDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNL 206
Query: 203 ---EDYTEMVDIYSFGLCLLEM 221
E + VD+Y+ GL E+
Sbjct: 207 RDXESALKQVDMYALGLIYWEI 228
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 94/203 (46%), Gaps = 18/203 (8%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG+G +V+ A + +V + + V +E +++TL++ ++ +
Sbjct: 196 LGAGQFGEVWMATYNKH------TKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLH 249
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVS--IKALKKWSKQVLEGLEYLHTHEPC 149
+V + + ITE G+L + K + L +S Q+ EG+ ++
Sbjct: 250 AVVTKE---PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN-- 304
Query: 150 IIHRDLNCSNIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTP-EYMAPELYE-EDYT 206
IHRDL +NI ++ ++ KI D G A ++ + A P ++ APE +T
Sbjct: 305 YIHRDLRAANILVSASL-VCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT 363
Query: 207 EMVDIYSFGLCLLEMVTM-EIPY 228
D++SFG+ L+E+VT IPY
Sbjct: 364 IKSDVWSFGILLMEIVTYGRIPY 386
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LGSG V + + Q + + L + + DP L + L +E +++ L N YI+
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ + + + E+ G L Y +++RHV K + + QV G++YL E +
Sbjct: 75 GI---CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL--EESNFV 129
Query: 152 HRDLNCSNIFINGNIGQ--VKIGDLGFAAIV--------GRSHAAHSIIGTPEYMAPE-L 200
HRDL N+ + + Q KI D G + + ++H + ++ APE +
Sbjct: 130 HRDLAARNVLL---VTQHYAKISDFGLSKALRADENYYKAQTHGKWPV----KWYAPECI 182
Query: 201 YEEDYTEMVDIYSFGLCLLE 220
++ D++SFG+ + E
Sbjct: 183 NYYKFSSKSDVWSFGVLMWE 202
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 20/206 (9%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
+G G+ +V+R D++ G + A +VRL F + E+ L + I+ Y
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE---------ELVACAGLSSPRIVPLY 132
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCII 151
+ +N E+ G+L K+ + + Q LEGLEYLHT I+
Sbjct: 133 GA--VREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR--IL 188
Query: 152 HRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSII------GTPEYMAPELYEEDY 205
H D+ N+ ++ + + + D G A + S++ GT +MAPE+
Sbjct: 189 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 248
Query: 206 TEM-VDIYSFGLCLLEMVTMEIPYSE 230
+ VDI+S +L M+ P+++
Sbjct: 249 CDAKVDIWSSCCMMLHMLNGCHPWTQ 274
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 124/287 (43%), Gaps = 46/287 (16%)
Query: 28 YSDLLGSGAVKKVYRAFD---QEEGIEVAWNQVRLSHFSEDPVLVNR--LHSEVQLLRTL 82
+ +LGSGA KV A + G+ + QV + E R L SE++++ L
Sbjct: 49 FGKVLGSGAFGKVMNATAYGISKTGVSI---QVAVKMLKEKADSSEREALMSELKMMTQL 105
Query: 83 KNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRH------------------- 123
+ IV + + I E C G+L Y + R
Sbjct: 106 GSHENIVNL-LGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 124 ----VSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFI-NGNIGQVKIGDLGFAA 178
++ + L ++ QV +G+E+L + C+ HRDL N+ + +G + VKI D G A
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLE-FKSCV-HRDLAARNVLVTHGKV--VKICDFGLAR 220
Query: 179 IVGRSHAAHSIIGTP----EYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEI-PYSECD 232
+ S + + + G ++MAPE L+E YT D++S+G+ L E+ ++ + PY
Sbjct: 221 DI-MSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279
Query: 233 SVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASEL 278
A YK + G K + E+ ++ C A R RPS L
Sbjct: 280 VDANFYKLIQNGFKMDQPFYATE-EIYIIMQSCWAFDSRKRPSFPNL 325
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 17/157 (10%)
Query: 135 QVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPE 194
QVLE + H H ++HRD+ NI I+ N G++K+ D G A++ + GT
Sbjct: 165 QVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTRV 221
Query: 195 YMAPEL--YEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNK 252
Y PE Y + ++S G+ L +MV +IP+ + + ++ Q +
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI----------IRGQVFFR 271
Query: 253 VK-DPEVKAFIEKCIA-QPRARPSASELLKDPFFSEL 287
+ E + I C+A +P RP+ E+ P+ ++
Sbjct: 272 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 308
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 127/288 (44%), Gaps = 49/288 (17%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYII-- 88
+G G +V++A ++ G +VA +V + + E P+ R E+++L+ LK++ ++
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR---EIKILQLLKHENVVNL 82
Query: 89 --VC--------------YSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKW 132
+C Y V+ +H+ ++ V ++ +K+
Sbjct: 83 IEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK------------FTLSEIKRV 130
Query: 133 SKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAH----- 187
+ +L GL Y+H ++ I+HRD+ +N+ I + G +K+ D G A + +
Sbjct: 131 MQMLLNGLYYIHRNK--ILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 188 SIIGTPEYMAPELY--EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDS---VAKIYKKVT 242
+ + T Y PEL E DY +D++ G + EM T P + ++ + ++
Sbjct: 188 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRS-PIMQGNTEQHQLALISQLC 246
Query: 243 GGVKPQALNKVKDPEVKAFIEKCIAQPR-ARPSASELLKDPFFSELND 289
G + P+ V + E+ +E Q R + ++DP+ +L D
Sbjct: 247 GSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLID 294
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 15/214 (7%)
Query: 80 RTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEG 139
R+L++ I+ V L H L + E + G L S + + +Q++ G
Sbjct: 70 RSLRHPNIVRFKEVILTPTH--LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG 127
Query: 140 LEYLHTHEPCIIHRDLNCSNIFINGNIG-QVKIGDLGFAAIVGRSHAAHSIIGTPEYMAP 198
+ Y H + C HRDL N ++G+ ++KI G++ S +GTP Y+AP
Sbjct: 128 VSYCHAMQVC--HRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAP 185
Query: 199 E-LYEEDYT-EMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKD- 255
E L +++Y ++ D++S G+ L M+ P+ + + K + + Q + D
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQY--AIPDY 243
Query: 256 ----PEVKAFIEKC-IAQPRARPSASELLKDPFF 284
PE + I + +A P R S E+ +F
Sbjct: 244 VHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 100/218 (45%), Gaps = 13/218 (5%)
Query: 28 YSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
+ D+LG+GA +V A D+ VA + + +E+ +L +K+ I
Sbjct: 22 FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKE---GSMENEIAVLHKIKHPNI 78
Query: 88 IVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHE 147
+ ++ H L I ++ + G L + + + + QVL+ ++YLH +
Sbjct: 79 VALDDIYESGGH--LYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH--D 134
Query: 148 PCIIHRDLNCSNIFING--NIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE-LYEED 204
I+HRDL N+ ++ I D G + + + GTP Y+APE L ++
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 205 YTEMVDIYSFGLCLLEMVTMEIP-YSECDSVAKIYKKV 241
Y++ VD +S G+ ++ P Y E D AK+++++
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDEND--AKLFEQI 230
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 103/227 (45%), Gaps = 39/227 (17%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVC 90
L+G+G+ V A+D+ E VA ++ L F ED + R+ E+ +L L + +++
Sbjct: 60 LIGTGSYGHVCEAYDKLEKRVVAIKKI-LRVF-EDLIDCKRILREIAILNRLNHDHVVKV 117
Query: 91 YSVWLD---DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHE 147
+ + ++ + L + E+ S + +R +++ +K +L G++Y+H+
Sbjct: 118 LDIVIPKDVEKFDELYVVLEIADSDFKKLFRTP-VYLTELHIKTLLYNLLVGVKYVHS-- 174
Query: 148 PCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS------------IIGTPE- 194
I+HRDL +N +N + VK+ D G A V +S ++ P
Sbjct: 175 AGILHRDLKPANCLVNQDCS-VKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHT 233
Query: 195 ---------------YMAPEL--YEEDYTEMVDIYSFGLCLLEMVTM 224
Y APEL +E+YTE +D++S G E++ M
Sbjct: 234 KNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 41/220 (18%)
Query: 74 SEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKK 131
E Q+++ L+++ ++ Y+V + +TE + G+L + K +++ + L
Sbjct: 51 QEAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 107
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV------GRSHA 185
+ Q+ G+ Y+ +HRDL +NI + N+ K+ D G A ++ R A
Sbjct: 108 MAAQIASGMAYVERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGA 164
Query: 186 AHSIIGTPEYMAPE--LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSE------CDSVAK 236
I ++ APE LY +T D++SFG+ L E+ T +PY D V +
Sbjct: 165 KFPI----KWTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 219
Query: 237 IYKKVTGGVKPQALNKV------KDPE-------VKAFIE 263
Y+ P++L+ + KDPE ++AF+E
Sbjct: 220 GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 259
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 100/218 (45%), Gaps = 13/218 (5%)
Query: 28 YSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
+ D+LG+GA +V A D+ VA + + +E+ +L +K+ I
Sbjct: 22 FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE---GSMENEIAVLHKIKHPNI 78
Query: 88 IVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHE 147
+ ++ H L I ++ + G L + + + + QVL+ ++YLH +
Sbjct: 79 VALDDIYESGGH--LYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH--D 134
Query: 148 PCIIHRDLNCSNIFING--NIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE-LYEED 204
I+HRDL N+ ++ I D G + + + GTP Y+APE L ++
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 205 YTEMVDIYSFGLCLLEMVTMEIP-YSECDSVAKIYKKV 241
Y++ VD +S G+ ++ P Y E D AK+++++
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDEND--AKLFEQI 230
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 41/220 (18%)
Query: 74 SEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKK 131
E Q+++ L+++ ++ Y+V + +TE + G+L + K +++ + L
Sbjct: 53 QEAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 109
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV------GRSHA 185
+ Q+ G+ Y+ +HRDL +NI + N+ K+ D G A ++ R A
Sbjct: 110 MAAQIASGMAYVERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGA 166
Query: 186 AHSIIGTPEYMAPE--LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSE------CDSVAK 236
I ++ APE LY +T D++SFG+ L E+ T +PY D V +
Sbjct: 167 KFPI----KWTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 221
Query: 237 IYKKVTGGVKPQALNKV------KDPE-------VKAFIE 263
Y+ P++L+ + KDPE ++AF+E
Sbjct: 222 GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 261
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 41/220 (18%)
Query: 74 SEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKK 131
E Q+++ L+++ ++ Y+V + +TE + G+L + K +++ + L
Sbjct: 62 QEAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV------GRSHA 185
+ Q+ G+ Y+ +HRDL +NI + N+ K+ D G A ++ R A
Sbjct: 119 MAAQIASGMAYVERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGA 175
Query: 186 AHSIIGTPEYMAPE--LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSE------CDSVAK 236
I ++ APE LY +T D++SFG+ L E+ T +PY D V +
Sbjct: 176 KFPI----KWTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Query: 237 IYKKVTGGVKPQALNKV------KDPE-------VKAFIE 263
Y+ P++L+ + KDPE ++AF+E
Sbjct: 231 GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 100/218 (45%), Gaps = 13/218 (5%)
Query: 28 YSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
+ D+LG+GA +V A D+ VA + + +E+ +L +K+ I
Sbjct: 22 FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE---GSMENEIAVLHKIKHPNI 78
Query: 88 IVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHE 147
+ ++ H L I ++ + G L + + + + QVL+ ++YLH +
Sbjct: 79 VALDDIYESGGH--LYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH--D 134
Query: 148 PCIIHRDLNCSNIFING--NIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE-LYEED 204
I+HRDL N+ ++ I D G + + + GTP Y+APE L ++
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 205 YTEMVDIYSFGLCLLEMVTMEIP-YSECDSVAKIYKKV 241
Y++ VD +S G+ ++ P Y E D AK+++++
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDEND--AKLFEQI 230
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 82/165 (49%), Gaps = 22/165 (13%)
Query: 75 EVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKW 132
E Q+++ L+++ ++ Y+V ++ + +TE + G+L + K +++ + L
Sbjct: 312 EAQVMKKLRHEKLVQLYAVVSEE---PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 368
Query: 133 SKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV------GRSHAA 186
+ Q+ G+ Y+ +HRDL +NI + N+ K+ D G A ++ R A
Sbjct: 369 AAQIASGMAYVERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGAK 425
Query: 187 HSIIGTPEYMAPE--LYEEDYTEMVDIYSFGLCLLEMVTM-EIPY 228
I ++ APE LY +T D++SFG+ L E+ T +PY
Sbjct: 426 FPI----KWTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPY 465
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 100/218 (45%), Gaps = 13/218 (5%)
Query: 28 YSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
+ D+LG+GA +V A D+ VA + + +E+ +L +K+ I
Sbjct: 22 FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE---GSMENEIAVLHKIKHPNI 78
Query: 88 IVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHE 147
+ ++ H L I ++ + G L + + + + QVL+ ++YLH +
Sbjct: 79 VALDDIYESGGH--LYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH--D 134
Query: 148 PCIIHRDLNCSNIFING--NIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE-LYEED 204
I+HRDL N+ ++ I D G + + + GTP Y+APE L ++
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 205 YTEMVDIYSFGLCLLEMVTMEIP-YSECDSVAKIYKKV 241
Y++ VD +S G+ ++ P Y E D AK+++++
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDEND--AKLFEQI 230
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 106/233 (45%), Gaps = 43/233 (18%)
Query: 74 SEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKK 131
E Q+++ L+++ ++ Y+V + +TE + G+L + K +++ + L
Sbjct: 62 QEAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV------GRSHA 185
+ Q+ G+ Y+ +HRDL +NI + N+ K+ D G A ++ R A
Sbjct: 119 MAAQIASGMAYVERMN--YVHRDLAAANILVGENL-VCKVADFGLARLIEDNEYTARQGA 175
Query: 186 AHSIIGTPEYMAPE--LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSE------CDSVAK 236
I ++ APE LY +T D++SFG+ L E+ T +PY D V +
Sbjct: 176 KFPI----KWTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Query: 237 IYKKVTGGVKPQALNKV------KDPE-------VKAFIEKCI--AQPRARPS 274
Y+ P++L+ + KDPE ++AF+E +P+ +P
Sbjct: 231 GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 34/210 (16%)
Query: 97 DQHNTLNFITEVCTSGNLRTYRKKHRHVS-IKALKKWSKQVLE-------GLEYLHTHEP 148
D+ N + I + +GNL K+H + S + + +Q LE GL YLHT
Sbjct: 105 DERNEMILIYKYMENGNL----KRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR-- 158
Query: 149 CIIHRDLNCSNIFINGNIGQVKIGDLGFA---AIVGRSHAAHSIIGTPEYMAPELY-EED 204
IIHRD+ NI ++ N KI D G + + ++H + GT Y+ PE + +
Sbjct: 159 AIIHRDVKSINILLDENFVP-KITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGR 217
Query: 205 YTEMVDIYSFGLCLLEM------VTMEIPYSECDSVAKIYKKVTGG-----VKPQALNKV 253
TE D+YSFG+ L E+ + +P + + G V P +K+
Sbjct: 218 LTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKI 277
Query: 254 KDPEVKAFIE---KCIA-QPRARPSASELL 279
+ ++ F + KC+A RPS ++L
Sbjct: 278 RPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 119/270 (44%), Gaps = 25/270 (9%)
Query: 19 VDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQL 78
+DPS + +GSG V+ + + +VA +R SE+ + E ++
Sbjct: 4 IDPSEL--TFVQEIGSGQFGLVHLGYWLNKD-KVAIKTIREGAMSEEDFI-----EEAEV 55
Query: 79 LRTLKNKYIIVCYSVWLDDQHNTL--NFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQV 136
+ L + ++ Y V L+ L F+ C S LRT R + + L V
Sbjct: 56 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDV 112
Query: 137 LEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP--- 193
EG+ YL E +IHRDL N + N +K+ D G V S GT
Sbjct: 113 CEGMAYLE--EASVIHRDLAARNCLVGEN-QVIKVSDFGMTRFVLDDQYTSS-TGTKFPV 168
Query: 194 EYMAPELYE-EDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGVKPQALN 251
++ +PE++ Y+ D++SFG+ + E+ + +IPY E S +++ + ++ G +
Sbjct: 169 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY-ENRSNSEVVEDISTGFRLYK-P 226
Query: 252 KVKDPEVKAFIEKCIAQ-PRARPSASELLK 280
++ V + C + P RP+ S LL+
Sbjct: 227 RLASTHVYQIMNHCWKERPEDRPAFSRLLR 256
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 103/236 (43%), Gaps = 23/236 (9%)
Query: 72 LHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKK 131
E +L +K+I + + DD N L + + G+L T K + + +
Sbjct: 121 FREERDVLVNGDSKWITTLHYAFQDD--NNLYLVMDYYVGGDLLTLLSKFEDRLPEEMAR 178
Query: 132 -WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS-- 188
+ +++ ++ +H +HRD+ NI ++ N G +++ D G + S
Sbjct: 179 FYLAEMVIAIDSVHQLH--YVHRDIKPDNILMDMN-GHIRLADFGSCLKLMEDGTVQSSV 235
Query: 189 IIGTPEYMAPELYEE------DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVT 242
+GTP+Y++PE+ + Y D +S G+C+ EM+ E P+ +S+ + Y K+
Sbjct: 236 AVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFY-AESLVETYGKIM 294
Query: 243 GGVK----PQALNKVKDPEVKAFIEKCIAQPRARPSAS---ELLKDPFFSELNDDD 291
+ P + V + K I + I R + + K PFFS ++ D+
Sbjct: 295 NHKERFQFPTQVTDVSE-NAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWDN 349
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 22/166 (13%)
Query: 74 SEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKK 131
E Q+++ L+++ ++ Y+V + +TE + G+L + K +++ + L
Sbjct: 52 QEAQVMKKLRHEKLVQLYAV---VSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 108
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV------GRSHA 185
+ Q+ G+ Y+ +HRDL +NI + N+ K+ D G A ++ R A
Sbjct: 109 MAAQIASGMAYVERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEXTARQGA 165
Query: 186 AHSIIGTPEYMAPE--LYEEDYTEMVDIYSFGLCLLEMVTM-EIPY 228
I ++ APE LY +T D++SFG+ L E+ T +PY
Sbjct: 166 KFPI----KWTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPY 206
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 131 KWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAI---VGRSHAAH 187
K ++ G+ +LH E IHRD+ +NI ++ KI D G A +
Sbjct: 128 KIAQGAANGINFLH--ENHHIHRDIKSANILLDEAF-TAKISDFGLARASEKFAQXVXXS 184
Query: 188 SIIGTPEYMAPELYEEDYTEMVDIYSFGLCLLEMVT 223
I+GT Y APE + T DIYSFG+ LLE++T
Sbjct: 185 RIVGTTAYXAPEALRGEITPKSDIYSFGVVLLEIIT 220
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 23/218 (10%)
Query: 80 RTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEG 139
R+L++ I+ V L H L + E + G L S + + +Q++ G
Sbjct: 70 RSLRHPNIVRFKEVILTPTH--LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG 127
Query: 140 LEYLHTHEPCIIHRDLNCSNIFINGNIG-QVKIGDLGFAAIVGRSHAAHS----IIGTPE 194
+ Y H + C HRDL N ++G+ ++KI G++ +S HS +GTP
Sbjct: 128 VSYCHAMQVC--HRDLKLENTLLDGSPAPRLKICAFGYS----KSSVLHSQPKDTVGTPA 181
Query: 195 YMAPE-LYEEDYT-EMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNK 252
Y+APE L +++Y ++ D++S G+ L M+ P+ + + K + + Q
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQY--A 239
Query: 253 VKD-----PEVKAFIEKC-IAQPRARPSASELLKDPFF 284
+ D PE + I + +A P R S E+ +F
Sbjct: 240 IPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 24/201 (11%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCY 91
LG+G +V+ A + +V + + V +E +++TL++ ++ +
Sbjct: 190 LGAGQFGEVWMATYNKH------TKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLH 243
Query: 92 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVS--IKALKKWSKQVLEGLEYLHTHEPC 149
+V + + ITE G+L + K + L +S Q+ EG+ ++
Sbjct: 244 AVVTKE---PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN-- 298
Query: 150 IIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYE-EDYTEM 208
IHRDL +NI ++ ++ KI D G A R A I ++ APE +T
Sbjct: 299 YIHRDLRAANILVSASL-VCKIADFGLA----RVGAKFPI----KWTAPEAINFGSFTIK 349
Query: 209 VDIYSFGLCLLEMVTM-EIPY 228
D++SFG+ L+E+VT IPY
Sbjct: 350 SDVWSFGILLMEIVTYGRIPY 370
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 107/228 (46%), Gaps = 35/228 (15%)
Query: 75 EVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKW 132
E Q+++ L+++ ++ Y+V ++ + +TE + G+L + K +++ + L
Sbjct: 230 EAQVMKKLRHEKLVQLYAVVSEE---PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 286
Query: 133 SKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIG 191
+ Q+ G+ Y+ +HRDL +NI + N+ K+ D G ++ + A
Sbjct: 287 AAQIASGMAYVERMN--YVHRDLRAANILVGENL-VCKVADFGLGRLIEDNEYTARQGAK 343
Query: 192 TP-EYMAPE--LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSE------CDSVAKIYKKV 241
P ++ APE LY +T D++SFG+ L E+ T +PY D V + Y+
Sbjct: 344 FPIKWTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 402
Query: 242 TGGVKPQALNKV------KDPE-------VKAFIEKCI--AQPRARPS 274
P++L+ + KDPE ++AF+E +P+ +P
Sbjct: 403 CPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQXQPG 450
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 22/166 (13%)
Query: 74 SEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKK 131
E Q+++ L+++ ++ Y+V + +TE G+L + K +++ + L
Sbjct: 59 QEAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVD 115
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV------GRSHA 185
S Q+ G+ Y+ +HRDL +NI + N+ K+ D G A ++ R A
Sbjct: 116 MSAQIASGMAYVERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEWTARQGA 172
Query: 186 AHSIIGTPEYMAPE--LYEEDYTEMVDIYSFGLCLLEMVTM-EIPY 228
I ++ APE LY +T D++SFG+ L E+ T +PY
Sbjct: 173 KFPI----KWTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPY 213
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 22/166 (13%)
Query: 74 SEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKK 131
E Q+++ L+++ ++ Y+V + +TE G+L + K +++ + L
Sbjct: 59 QEAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVD 115
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV------GRSHA 185
S Q+ G+ Y+ +HRDL +NI + N+ K+ D G A ++ R A
Sbjct: 116 MSAQIASGMAYVERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGA 172
Query: 186 AHSIIGTPEYMAPE--LYEEDYTEMVDIYSFGLCLLEMVTM-EIPY 228
I ++ APE LY +T D++SFG+ L E+ T +PY
Sbjct: 173 KFPI----KWTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPY 213
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 125/297 (42%), Gaps = 45/297 (15%)
Query: 27 RYSDLLGSGAVKKVYRAFDQEEG----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL 82
R +LGSGA VY+ +G I VA +++ + P + E ++ +
Sbjct: 20 RKVKVLGSGAFGTVYKGIWIPDGENVKIPVA---IKVLRENTSPKANKEILDEAYVMAGV 76
Query: 83 KNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLE 141
+ Y+ + L +T+ +T++ G L + +++R + + L W Q+ +G+
Sbjct: 77 GSPYVSRLLGICL---TSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMS 133
Query: 142 YLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTP---EYMAP 198
YL ++HRDL N+ + + VKI D G A ++ + G ++MA
Sbjct: 134 YLEDVR--LVHRDLAARNVLVK-SPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMAL 190
Query: 199 E-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNK---VK 254
E + +T D++S+G+ + E++T AK Y + P L K +
Sbjct: 191 ESILRRRFTHQSDVWSYGVTVWELMTFG---------AKPYDGIPAREIPDLLEKGERLP 241
Query: 255 DP-----EVKAFIEKCI-----AQPRARPSASE---LLKDP--FFSELNDDDSEPSP 296
P +V + KC +PR R SE + +DP F N+D SP
Sbjct: 242 QPPICTIDVYMIMVKCWMIDSECRPRFRELVSEFSRMARDPQRFVVIQNEDLGPASP 298
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 41/220 (18%)
Query: 74 SEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKK 131
E Q+++ ++++ ++ Y+V + +TE + G+L + K +++ + L
Sbjct: 62 QEAQVMKKIRHEKLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV------GRSHA 185
+ Q+ G+ Y+ +HRDL +NI + N+ K+ D G A ++ R A
Sbjct: 119 MAAQIASGMAYVERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGA 175
Query: 186 AHSIIGTPEYMAPE--LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSE------CDSVAK 236
I ++ APE LY +T D++SFG+ L E+ T +PY D V +
Sbjct: 176 KFPI----KWTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Query: 237 IYKKVTGGVKPQALNKV------KDPE-------VKAFIE 263
Y+ P++L+ + KDPE ++AF+E
Sbjct: 231 GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 73/136 (53%), Gaps = 9/136 (6%)
Query: 100 NTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++L +T+ G+L + ++HR + + L W Q+ +G+ YL H ++HR+L
Sbjct: 105 SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH--GMVHRNLAAR 162
Query: 159 NIFINGNIGQVKIGDLGFAAIV--GRSHAAHSIIGTP-EYMAPE-LYEEDYTEMVDIYSF 214
N+ + + QV++ D G A ++ +S TP ++MA E ++ YT D++S+
Sbjct: 163 NVLLK-SPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSY 221
Query: 215 GLCLLEMVTMEI-PYS 229
G+ + E++T PY+
Sbjct: 222 GVTVWELMTFGAEPYA 237
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 83/162 (51%), Gaps = 8/162 (4%)
Query: 124 VSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 183
++++ L +S QV +G+E+L + + IHRDL NI ++ VKI D G A + +
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEK-NVVKICDFGLARDIYKD 251
Query: 184 --HAAHSIIGTP-EYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEI-PYSECDSVAKIY 238
+ P ++MAPE +++ YT D++SFG+ L E+ ++ PY +
Sbjct: 252 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 311
Query: 239 KKVTGGVKPQALNKVKDPEVKAFIEKCIAQPRARPSASELLK 280
+++ G + +A + + ++ +P RP+ SEL++
Sbjct: 312 RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 353
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 124 VSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 183
++++ L +S QV G+E+L + + IHRDL NI ++ N VKI D G A + ++
Sbjct: 196 ITMEDLISYSFQVARGMEFLSSRK--CIHRDLAARNILLSEN-NVVKICDFGLARDIYKN 252
Query: 184 --HAAHSIIGTP-EYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIY 238
+ P ++MAPE ++++ Y+ D++S+G+ L E+ ++ PY
Sbjct: 253 PDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFC 312
Query: 239 KKVTGGVKPQALNKVKDPEVKAFIEKCIAQ-PRARPSASELLK 280
++ G++ +A + PE+ + C + P+ RP +EL++
Sbjct: 313 SRLREGMRMRA-PEYSTPEIYQIMLDCWHRDPKERPRFAELVE 354
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 94/222 (42%), Gaps = 35/222 (15%)
Query: 83 KNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLR-TYRKKHRHVSI---KALKKWSKQVLE 138
++ +++ +S W +D H + E C G+L + +R +S LK QV
Sbjct: 65 QHSHVVRYFSAWAEDDHMLIQ--NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 122
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFIN------------------GNIGQVKIGDLGFAAIV 180
GL Y+H+ ++H D+ SNIFI+ N KIGDLG V
Sbjct: 123 GLRYIHSM--SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGH---V 177
Query: 181 GRSHAAHSIIGTPEYMAPELYEEDYTEM--VDIYSFGLCLLEMVTMEIPYSECDSVAKIY 238
R + G ++A E+ +E+YT + DI++ L ++ E D +I
Sbjct: 178 TRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVXAAGAEPLPRNGDQWHEIR 237
Query: 239 KKVTGGVKPQALNKVKDPEVKAFIEKCIAQPRARPSASELLK 280
+ + PQ L++ +K I P RPSA L+K
Sbjct: 238 QGRLPRI-PQVLSQEFTELLKVMIH---PDPERRPSAMALVK 275
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 83/162 (51%), Gaps = 8/162 (4%)
Query: 124 VSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 183
++++ L +S QV +G+E+L + + IHRDL NI ++ VKI D G A + +
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEK-NVVKICDFGLARDIYKD 253
Query: 184 --HAAHSIIGTP-EYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEI-PYSECDSVAKIY 238
+ P ++MAPE +++ YT D++SFG+ L E+ ++ PY +
Sbjct: 254 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 313
Query: 239 KKVTGGVKPQALNKVKDPEVKAFIEKCIAQPRARPSASELLK 280
+++ G + +A + + ++ +P RP+ SEL++
Sbjct: 314 RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 355
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 22/166 (13%)
Query: 74 SEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKK 131
E Q+++ L+++ ++ Y+V + +TE + G+L + K +++ + L
Sbjct: 55 QEAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 111
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV------GRSHA 185
+ Q+ G+ Y+ +HRDL +NI + N+ K+ D G A ++ R A
Sbjct: 112 MAAQIASGMAYVERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGA 168
Query: 186 AHSIIGTPEYMAPE--LYEEDYTEMVDIYSFGLCLLEMVTM-EIPY 228
I ++ APE LY +T D++SFG+ L E+ T +PY
Sbjct: 169 KFPI----KWTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPY 209
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 41/220 (18%)
Query: 74 SEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKK 131
E Q+++ L+++ ++ Y+V + +TE + G L + K +++ + L
Sbjct: 62 QEAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVD 118
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV------GRSHA 185
+ Q+ G+ Y+ +HRDL +NI + N+ K+ D G A ++ R A
Sbjct: 119 MAAQIASGMAYVERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGA 175
Query: 186 AHSIIGTPEYMAPE--LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSE------CDSVAK 236
I ++ APE LY +T D++SFG+ L E+ T +PY D V +
Sbjct: 176 KFPI----KWTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Query: 237 IYKKVTGGVKPQALNKV------KDPE-------VKAFIE 263
Y+ P++L+ + KDPE ++AF+E
Sbjct: 231 GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 20/140 (14%)
Query: 102 LNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHT---------HEPCIIH 152
L IT G+L Y K + ++ L ++ + GL YLH H+P I H
Sbjct: 88 LWLITAFHDKGSLTDYLKGNI-ITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAH 146
Query: 153 RDLNCSNIFINGNIGQVKIGDLGFAAIV--GRSHA-AHSIIGTPEYMAPEL------YEE 203
RD N+ + ++ V + D G A G+ H +GT YMAPE+ ++
Sbjct: 147 RDFKSKNVLLKSDLTAV-LADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQR 205
Query: 204 DYTEMVDIYSFGLCLLEMVT 223
D +D+Y+ GL L E+V+
Sbjct: 206 DAFLRIDMYAMGLVLWELVS 225
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 18/158 (11%)
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS--IIGTPEYMAPELYE- 202
H+ +HRD+ N+ ++ N G +++ D G + S +GTP+Y++PE+ +
Sbjct: 208 HQLHYVHRDIKPDNVLLDVN-GHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQA 266
Query: 203 -ED----YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVK----PQALNKV 253
ED Y D +S G+C+ EM+ E P+ +S+ + Y K+ + P + V
Sbjct: 267 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFY-AESLVETYGKIMNHEERFQFPSHVTDV 325
Query: 254 KDPEVKAFIEKCIAQPRARPSAS---ELLKDPFFSELN 288
+ E K I++ I R + + K FF LN
Sbjct: 326 SE-EAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGLN 362
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 83/162 (51%), Gaps = 8/162 (4%)
Query: 124 VSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 183
++++ L +S QV +G+E+L + + IHRDL NI ++ VKI D G A + +
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEK-NVVKICDFGLARDIYKD 244
Query: 184 --HAAHSIIGTP-EYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEI-PYSECDSVAKIY 238
+ P ++MAPE +++ YT D++SFG+ L E+ ++ PY +
Sbjct: 245 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 304
Query: 239 KKVTGGVKPQALNKVKDPEVKAFIEKCIAQPRARPSASELLK 280
+++ G + +A + + ++ +P RP+ SEL++
Sbjct: 305 RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 346
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 83/162 (51%), Gaps = 8/162 (4%)
Query: 124 VSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 183
++++ L +S QV +G+E+L + + IHRDL NI ++ VKI D G A + +
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEK-NVVKICDFGLARDIYKD 246
Query: 184 --HAAHSIIGTP-EYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEI-PYSECDSVAKIY 238
+ P ++MAPE +++ YT D++SFG+ L E+ ++ PY +
Sbjct: 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 306
Query: 239 KKVTGGVKPQALNKVKDPEVKAFIEKCIAQPRARPSASELLK 280
+++ G + +A + + ++ +P RP+ SEL++
Sbjct: 307 RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 348
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 111/265 (41%), Gaps = 42/265 (15%)
Query: 35 GAVKK-VYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSV 93
G+V++ VYR +++ I+VA +++ + + E Q++ L N YI+ V
Sbjct: 24 GSVRQGVYRM--RKKQIDVA---IKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGV 78
Query: 94 WLDDQHNTLNFITEVCTSGNLRTYR-KKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIH 152
Q L + E+ G L + K + + + + QV G++YL E +H
Sbjct: 79 ---CQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE--EKNFVH 133
Query: 153 RDLNCSNIFINGNIGQVKIGDLGFAAIVGRS---HAAHSIIGTP-EYMAPELYE-EDYTE 207
RDL N+ + N KI D G + +G + A S P ++ APE ++
Sbjct: 134 RDLAARNVLLV-NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 192
Query: 208 MVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIE---K 264
D++S+G+ + E ++ G KP K+K PEV AFIE +
Sbjct: 193 RSDVWSYGVTMWEALSY-------------------GQKP--YKKMKGPEVMAFIEQGKR 231
Query: 265 CIAQPRARPSASELLKDPFFSELND 289
P P L+ D + + D
Sbjct: 232 MECPPECPPELYALMSDCWIYKWED 256
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 18/158 (11%)
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS--IIGTPEYMAPELYE- 202
H+ +HRD+ N+ ++ N G +++ D G + S +GTP+Y++PE+ +
Sbjct: 192 HQLHYVHRDIKPDNVLLDVN-GHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQA 250
Query: 203 -ED----YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVK----PQALNKV 253
ED Y D +S G+C+ EM+ E P+ +S+ + Y K+ + P + V
Sbjct: 251 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFY-AESLVETYGKIMNHEERFQFPSHVTDV 309
Query: 254 KDPEVKAFIEKCIAQPRARPSAS---ELLKDPFFSELN 288
+ E K I++ I R + + K FF LN
Sbjct: 310 SE-EAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGLN 346
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 73/136 (53%), Gaps = 9/136 (6%)
Query: 100 NTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
++L +T+ G+L + ++HR + + L W Q+ +G+ YL H ++HR+L
Sbjct: 87 SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH--GMVHRNLAAR 144
Query: 159 NIFINGNIGQVKIGDLGFAAIV--GRSHAAHSIIGTP-EYMAPE-LYEEDYTEMVDIYSF 214
N+ + + QV++ D G A ++ +S TP ++MA E ++ YT D++S+
Sbjct: 145 NVLLK-SPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSY 203
Query: 215 GLCLLEMVTMEI-PYS 229
G+ + E++T PY+
Sbjct: 204 GVTVWELMTFGAEPYA 219
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 112/274 (40%), Gaps = 22/274 (8%)
Query: 21 PSGRFGRYSD-LLGSGAVKKVYRAFDQEEGIEVAWNQVR-----LSHFSEDPVLVNRLHS 74
P R +SD ++G G VY E I+ A N+++ LS +E V
Sbjct: 17 PHERVVTHSDRVIGKGHFGVVYHG----EYIDQAQNRIQCAIKSLSRITEMQQ-VEAFLR 71
Query: 75 EVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSK 134
E L+R L + ++ + L + + +C L+ R R+ ++K L +
Sbjct: 72 EGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGL 131
Query: 135 QVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA-IVGRSHAA-----HS 188
QV G+EYL E +HRDL N ++ + VK+ D G A I+ R + + H+
Sbjct: 132 QVARGMEYLA--EQKFVHRDLAARNCMLDESF-TVKVADFGLARDILDREYYSVQQHRHA 188
Query: 189 IIGTPEYMAPELYEEDYTEMVDIYSFGLCLLEMVTMEI-PYSECDSVAKIYKKVTGGVKP 247
+ L +T D++SFG+ L E++T PY D + G P
Sbjct: 189 RLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLP 248
Query: 248 QALNKVKDPEVKAFIEKCIAQPRARPSASELLKD 281
Q D + + A P RP+ L+ +
Sbjct: 249 QP-EYCPDSLYQVMQQCWEADPAVRPTFRVLVGE 281
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 82/161 (50%), Gaps = 14/161 (8%)
Query: 75 EVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKW 132
E Q+++ L+++ ++ Y+V ++ + +TE + G+L + K +++ + L
Sbjct: 229 EAQVMKKLRHEKLVQLYAVVSEE---PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 285
Query: 133 SKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIG 191
+ Q+ G+ Y+ +HRDL +NI + N+ K+ D G A ++ + A
Sbjct: 286 AAQIASGMAYVERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGAK 342
Query: 192 TP-EYMAPE--LYEEDYTEMVDIYSFGLCLLEMVTM-EIPY 228
P ++ APE LY +T D++SFG+ L E+ T +PY
Sbjct: 343 FPIKWTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPY 382
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 82/161 (50%), Gaps = 14/161 (8%)
Query: 75 EVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKW 132
E Q+++ L+++ ++ Y+V ++ + +TE + G+L + K +++ + L
Sbjct: 229 EAQVMKKLRHEKLVQLYAVVSEE---PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 285
Query: 133 SKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIG 191
+ Q+ G+ Y+ +HRDL +NI + N+ K+ D G A ++ + A
Sbjct: 286 AAQIASGMAYVERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGAK 342
Query: 192 TP-EYMAPE--LYEEDYTEMVDIYSFGLCLLEMVTM-EIPY 228
P ++ APE LY +T D++SFG+ L E+ T +PY
Sbjct: 343 FPIKWTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPY 382
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 41/220 (18%)
Query: 74 SEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKK 131
E Q+++ L+++ ++ Y+V + + E + G+L + K +++ + L
Sbjct: 62 QEAQVMKKLRHEKLVQLYAV---VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV------GRSHA 185
+ Q+ G+ Y+ +HRDL +NI + N+ K+ D G A ++ R A
Sbjct: 119 MAAQIASGMAYVERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEXTARQGA 175
Query: 186 AHSIIGTPEYMAPE--LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSE------CDSVAK 236
I ++ APE LY +T D++SFG+ L E+ T +PY D V +
Sbjct: 176 KFPI----KWTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Query: 237 IYKKVTGGVKPQALNKV------KDPE-------VKAFIE 263
Y+ P++L+ + KDPE ++AF+E
Sbjct: 231 GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 67/169 (39%), Gaps = 34/169 (20%)
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRT--YRKKHRHVSIKALKKWSKQVLE---------- 138
Y+ L N L FI TS N T + H H +Q LE
Sbjct: 54 YNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVS 113
Query: 139 ---GLEYLHTH------EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI 189
GL +LH +P I HRD N+ + N+ Q I DLG A + + I
Sbjct: 114 AACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNL-QCCIADLGLAVMHSQGSDYLDI 172
Query: 190 -----IGTPEYMAPELYEE-------DYTEMVDIYSFGLCLLEMVTMEI 226
+GT YMAPE+ +E + + DI++FGL L E+ I
Sbjct: 173 GNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTI 221
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 41/220 (18%)
Query: 74 SEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKK 131
E Q+++ L+++ ++ Y+V + + E + G+L + K +++ + L
Sbjct: 62 QEAQVMKKLRHEKLVQLYAV---VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV------GRSHA 185
+ Q+ G+ Y+ +HRDL +NI + N+ K+ D G A ++ R A
Sbjct: 119 MAAQIASGMAYVERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGA 175
Query: 186 AHSIIGTPEYMAPE--LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSE------CDSVAK 236
I ++ APE LY +T D++SFG+ L E+ T +PY D V +
Sbjct: 176 KFPI----KWTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Query: 237 IYKKVTGGVKPQALNKV------KDPE-------VKAFIE 263
Y+ P++L+ + KDPE ++AF+E
Sbjct: 231 GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 41/220 (18%)
Query: 74 SEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKK 131
E Q+++ L+++ ++ Y+V + + E + G+L + K +++ + L
Sbjct: 62 QEAQVMKKLRHEKLVQLYAV---VSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV------GRSHA 185
+ Q+ G+ Y+ +HRDL +NI + N+ K+ D G A ++ R A
Sbjct: 119 MAAQIASGMAYVERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGA 175
Query: 186 AHSIIGTPEYMAPE--LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSE------CDSVAK 236
I ++ APE LY +T D++SFG+ L E+ T +PY D V +
Sbjct: 176 KFPI----KWTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Query: 237 IYKKVTGGVKPQALNKV------KDPE-------VKAFIE 263
Y+ P++L+ + KDPE ++AF+E
Sbjct: 231 GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 110/265 (41%), Gaps = 42/265 (15%)
Query: 35 GAVKK-VYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSV 93
G+V++ VYR +++ I+VA ++ D + E Q++ L N YI+ V
Sbjct: 350 GSVRQGVYRM--RKKQIDVAIKVLKQGTEKAD---TEEMMREAQIMHQLDNPYIVRLIGV 404
Query: 94 WLDDQHNTLNFITEVCTSGNLRTYR-KKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIH 152
Q L + E+ G L + K + + + + QV G++YL E +H
Sbjct: 405 C---QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE--EKNFVH 459
Query: 153 RDLNCSNIFINGNIGQVKIGDLGFAAIVGRS---HAAHSIIGTP-EYMAPELYE-EDYTE 207
R+L N+ + N KI D G + +G + A S P ++ APE ++
Sbjct: 460 RNLAARNVLLV-NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 518
Query: 208 MVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIE---K 264
D++S+G+ + E ++ G KP K+K PEV AFIE +
Sbjct: 519 RSDVWSYGVTMWEALSY-------------------GQKP--YKKMKGPEVMAFIEQGKR 557
Query: 265 CIAQPRARPSASELLKDPFFSELND 289
P P L+ D + + D
Sbjct: 558 MECPPECPPELYALMSDCWIYKWED 582
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 94/222 (42%), Gaps = 35/222 (15%)
Query: 83 KNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLR-TYRKKHRHVSI---KALKKWSKQVLE 138
++ +++ +S W +D H + E C G+L + +R +S LK QV
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQ--NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 124
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFIN------------------GNIGQVKIGDLGFAAIV 180
GL Y+H+ ++H D+ SNIFI+ N KIGDLG V
Sbjct: 125 GLRYIHSM--SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGH---V 179
Query: 181 GRSHAAHSIIGTPEYMAPELYEEDYTEM--VDIYSFGLCLLEMVTMEIPYSECDSVAKIY 238
R + G ++A E+ +E+YT + DI++ L ++ E D +I
Sbjct: 180 TRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEIR 239
Query: 239 KKVTGGVKPQALNKVKDPEVKAFIEKCIAQPRARPSASELLK 280
+ + PQ L++ +K I P RPSA L+K
Sbjct: 240 QGRLPRI-PQVLSQEFTELLKVMIH---PDPERRPSAMALVK 277
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 122/274 (44%), Gaps = 19/274 (6%)
Query: 17 VEVDPSGRFGRYSDLLGSGAVKKVYRA--FDQE-EGIEVAWNQV-RLSHFSEDPVLVNRL 72
V + PS +++++G G VY D + + I A + R++ E V++
Sbjct: 41 VVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE----VSQF 96
Query: 73 HSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRH-VSIKALKK 131
+E +++ + ++ + L + + L + G+LR + + H ++K L
Sbjct: 97 LTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIG 155
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV--GRSHAAHSI 189
+ QV +G++YL + + +HRDL N ++ VK+ D G A + ++ H+
Sbjct: 156 FGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNK 212
Query: 190 IGTP---EYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV 245
G ++MA E L + +T D++SFG+ L E++T P + I + G
Sbjct: 213 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 272
Query: 246 KPQALNKVKDPEVKAFIEKCIAQPRARPSASELL 279
+ DP + ++ + RPS SEL+
Sbjct: 273 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 306
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 94/222 (42%), Gaps = 35/222 (15%)
Query: 83 KNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLR-TYRKKHRHVSI---KALKKWSKQVLE 138
++ +++ +S W +D H + E C G+L + +R +S LK QV
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQ--NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 124
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFIN------------------GNIGQVKIGDLGFAAIV 180
GL Y+H+ ++H D+ SNIFI+ N KIGDLG V
Sbjct: 125 GLRYIHSM--SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGH---V 179
Query: 181 GRSHAAHSIIGTPEYMAPELYEEDYTEM--VDIYSFGLCLLEMVTMEIPYSECDSVAKIY 238
R + G ++A E+ +E+YT + DI++ L ++ E D +I
Sbjct: 180 TRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEIR 239
Query: 239 KKVTGGVKPQALNKVKDPEVKAFIEKCIAQPRARPSASELLK 280
+ + PQ L++ +K I P RPSA L+K
Sbjct: 240 QGRLPRI-PQVLSQEFTELLKVMIH---PDPERRPSAMALVK 277
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 91/215 (42%), Gaps = 24/215 (11%)
Query: 100 NTLNFITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 158
N L + E G+L T K + + + + +++ ++ H +HRD+
Sbjct: 134 NYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAID--SVHRLGYVHRDIKPD 191
Query: 159 NIFINGNIGQVKIGDLGFAAIVGRSHAAHSII--GTPEYMAPELYEEDYTEM-------- 208
NI ++ G +++ D G + S++ GTP+Y++PE+ +
Sbjct: 192 NILLD-RCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPE 250
Query: 209 VDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKD---PEVKAFIEKC 265
D ++ G+ EM + P+ DS A+ Y K+ + +L V + E + FI++
Sbjct: 251 CDWWALGVFAYEMFYGQTPFY-ADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRL 309
Query: 266 IAQPR---ARPSASELLKDPFFSELNDD---DSEP 294
+ P R A + PFF L+ D DS P
Sbjct: 310 LCPPETRLGRGGAGDFRTHPFFFGLDWDGLRDSVP 344
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 94/222 (42%), Gaps = 35/222 (15%)
Query: 83 KNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLR-TYRKKHRHVSI---KALKKWSKQVLE 138
++ +++ +S W +D H + E C G+L + +R +S LK QV
Sbjct: 69 QHSHVVRYFSAWAEDDHMLIQ--NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 126
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFIN------------------GNIGQVKIGDLGFAAIV 180
GL Y+H+ ++H D+ SNIFI+ N KIGDLG V
Sbjct: 127 GLRYIHSM--SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGH---V 181
Query: 181 GRSHAAHSIIGTPEYMAPELYEEDYTEM--VDIYSFGLCLLEMVTMEIPYSECDSVAKIY 238
R + G ++A E+ +E+YT + DI++ L ++ E D +I
Sbjct: 182 TRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEIR 241
Query: 239 KKVTGGVKPQALNKVKDPEVKAFIEKCIAQPRARPSASELLK 280
+ + PQ L++ +K I P RPSA L+K
Sbjct: 242 QGRLPRI-PQVLSQEFTELLKVMIH---PDPERRPSAMALVK 279
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 98 QHNTLNFITEVCTSGNLRTY-RKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLN 156
++ + ITE +G L + R+K S+ L + + G++YL +HRDL
Sbjct: 117 KYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN--YVHRDLA 174
Query: 157 CSNIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTP---EYMAPE-LYEEDYTEMVDI 211
NI +N N+ K+ D G + ++ A ++ G + APE + +T D+
Sbjct: 175 ARNILVNSNL-VCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDV 233
Query: 212 YSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGVK-PQALNKVKDPEVKAFIEKCIAQP 269
+SFG+ + E++T E PY E S ++ K + G + P ++ + + +C Q
Sbjct: 234 WSFGIVMWEVMTYGERPYWEL-SNHEVMKAINDGFRLPTPMD--CPSAIYQLMMQCWQQE 290
Query: 270 RAR 272
RAR
Sbjct: 291 RAR 293
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 83/174 (47%), Gaps = 14/174 (8%)
Query: 75 EVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSK 134
E ++ + +++ + + DD++ L + E G+L + V K + ++
Sbjct: 124 ERDIMAFANSPWVVQLFYAFQDDRY--LYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTA 180
Query: 135 QVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAH--SIIGT 192
+V+ L+ +H+ IHRD+ N+ ++ + G +K+ D G + + + +GT
Sbjct: 181 EVVLALDAIHSM--GFIHRDVKPDNMLLDKS-GHLKLADFGTCMKMNKEGMVRCDTAVGT 237
Query: 193 PEYMAPELYEED-----YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV 241
P+Y++PE+ + Y D +S G+ L EM+ + P+ DS+ Y K+
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY-ADSLVGTYSKI 290
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 83/174 (47%), Gaps = 14/174 (8%)
Query: 75 EVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSK 134
E ++ + +++ + + DD++ L + E G+L + V K + ++
Sbjct: 119 ERDIMAFANSPWVVQLFYAFQDDRY--LYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTA 175
Query: 135 QVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAH--SIIGT 192
+V+ L+ +H+ IHRD+ N+ ++ + G +K+ D G + + + +GT
Sbjct: 176 EVVLALDAIHSM--GFIHRDVKPDNMLLDKS-GHLKLADFGTCMKMNKEGMVRCDTAVGT 232
Query: 193 PEYMAPELYEED-----YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV 241
P+Y++PE+ + Y D +S G+ L EM+ + P+ DS+ Y K+
Sbjct: 233 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY-ADSLVGTYSKI 285
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 29/183 (15%)
Query: 64 EDPVLVNR--LHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKH 121
+DP L R E +LL L++++I+ Y V D + L + E G+L + + H
Sbjct: 54 KDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDG--DPLIMVFEYMKHGDLNKFLRAH 111
Query: 122 R----------------HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGN 165
+ + + + Q+ G+ YL + +HRDL N + N
Sbjct: 112 GPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH--FVHRDLATRNCLVGAN 169
Query: 166 IGQVKIGDLGFAAIVGRSH----AAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGLCLLE 220
+ VKIGD G + V + H+++ +M PE + +T D++SFG+ L E
Sbjct: 170 L-LVKIGDFGMSRDVYSTDYYRVGGHTMLPI-RWMPPESIMYRKFTTESDVWSFGVILWE 227
Query: 221 MVT 223
+ T
Sbjct: 228 IFT 230
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 122/274 (44%), Gaps = 19/274 (6%)
Query: 17 VEVDPSGRFGRYSDLLGSGAVKKVYRA--FDQE-EGIEVAWNQV-RLSHFSEDPVLVNRL 72
V + PS +++++G G VY D + + I A + R++ E V++
Sbjct: 15 VVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE----VSQF 70
Query: 73 HSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRH-VSIKALKK 131
+E +++ + ++ + L + + L + G+LR + + H ++K L
Sbjct: 71 LTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIG 129
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV--GRSHAAHSI 189
+ QV +G++YL + + +HRDL N ++ VK+ D G A + ++ H+
Sbjct: 130 FGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNK 186
Query: 190 IGTP---EYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV 245
G ++MA E L + +T D++SFG+ L E++T P + I + G
Sbjct: 187 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 246
Query: 246 KPQALNKVKDPEVKAFIEKCIAQPRARPSASELL 279
+ DP + ++ + RPS SEL+
Sbjct: 247 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 280
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 122/274 (44%), Gaps = 19/274 (6%)
Query: 17 VEVDPSGRFGRYSDLLGSGAVKKVYRA--FDQE-EGIEVAWNQV-RLSHFSEDPVLVNRL 72
V + PS +++++G G VY D + + I A + R++ E V++
Sbjct: 42 VVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE----VSQF 97
Query: 73 HSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRH-VSIKALKK 131
+E +++ + ++ + L + + L + G+LR + + H ++K L
Sbjct: 98 LTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIG 156
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV--GRSHAAHSI 189
+ QV +G++YL + + +HRDL N ++ VK+ D G A + ++ H+
Sbjct: 157 FGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNK 213
Query: 190 IGTP---EYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV 245
G ++MA E L + +T D++SFG+ L E++T P + I + G
Sbjct: 214 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 273
Query: 246 KPQALNKVKDPEVKAFIEKCIAQPRARPSASELL 279
+ DP + ++ + RPS SEL+
Sbjct: 274 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 307
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 79/163 (48%), Gaps = 14/163 (8%)
Query: 86 YIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHT 145
+++ + + DD++ L + E G+L + V K + ++ +V+ L+ +H+
Sbjct: 135 WVVQLFYAFQDDRY--LYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHS 191
Query: 146 HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAH--SIIGTPEYMAPELYEE 203
IHRD+ N+ ++ + G +K+ D G + + + +GTP+Y++PE+ +
Sbjct: 192 M--GFIHRDVKPDNMLLDKS-GHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS 248
Query: 204 D-----YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV 241
Y D +S G+ L EM+ + P+ DS+ Y K+
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVGDTPFY-ADSLVGTYSKI 290
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 122/274 (44%), Gaps = 19/274 (6%)
Query: 17 VEVDPSGRFGRYSDLLGSGAVKKVYRA--FDQE-EGIEVAWNQV-RLSHFSEDPVLVNRL 72
V + PS +++++G G VY D + + I A + R++ E V++
Sbjct: 20 VVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE----VSQF 75
Query: 73 HSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRH-VSIKALKK 131
+E +++ + ++ + L + + L + G+LR + + H ++K L
Sbjct: 76 LTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIG 134
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV--GRSHAAHSI 189
+ QV +G++YL + + +HRDL N ++ VK+ D G A + ++ H+
Sbjct: 135 FGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNK 191
Query: 190 IGTP---EYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV 245
G ++MA E L + +T D++SFG+ L E++T P + I + G
Sbjct: 192 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 251
Query: 246 KPQALNKVKDPEVKAFIEKCIAQPRARPSASELL 279
+ DP + ++ + RPS SEL+
Sbjct: 252 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 285
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 122/274 (44%), Gaps = 19/274 (6%)
Query: 17 VEVDPSGRFGRYSDLLGSGAVKKVYRA--FDQE-EGIEVAWNQV-RLSHFSEDPVLVNRL 72
V + PS +++++G G VY D + + I A + R++ E V++
Sbjct: 23 VVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE----VSQF 78
Query: 73 HSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRH-VSIKALKK 131
+E +++ + ++ + L + + L + G+LR + + H ++K L
Sbjct: 79 LTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIG 137
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV--GRSHAAHSI 189
+ QV +G++YL + + +HRDL N ++ VK+ D G A + ++ H+
Sbjct: 138 FGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNK 194
Query: 190 IGTP---EYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV 245
G ++MA E L + +T D++SFG+ L E++T P + I + G
Sbjct: 195 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 254
Query: 246 KPQALNKVKDPEVKAFIEKCIAQPRARPSASELL 279
+ DP + ++ + RPS SEL+
Sbjct: 255 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 122/274 (44%), Gaps = 19/274 (6%)
Query: 17 VEVDPSGRFGRYSDLLGSGAVKKVYRA--FDQE-EGIEVAWNQV-RLSHFSEDPVLVNRL 72
V + PS +++++G G VY D + + I A + R++ E V++
Sbjct: 21 VVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE----VSQF 76
Query: 73 HSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRH-VSIKALKK 131
+E +++ + ++ + L + + L + G+LR + + H ++K L
Sbjct: 77 LTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIG 135
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV--GRSHAAHSI 189
+ QV +G++YL + + +HRDL N ++ VK+ D G A + ++ H+
Sbjct: 136 FGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNK 192
Query: 190 IGTP---EYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV 245
G ++MA E L + +T D++SFG+ L E++T P + I + G
Sbjct: 193 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 252
Query: 246 KPQALNKVKDPEVKAFIEKCIAQPRARPSASELL 279
+ DP + ++ + RPS SEL+
Sbjct: 253 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 286
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 122/274 (44%), Gaps = 19/274 (6%)
Query: 17 VEVDPSGRFGRYSDLLGSGAVKKVYRA--FDQE-EGIEVAWNQV-RLSHFSEDPVLVNRL 72
V + PS +++++G G VY D + + I A + R++ E V++
Sbjct: 18 VVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE----VSQF 73
Query: 73 HSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRH-VSIKALKK 131
+E +++ + ++ + L + + L + G+LR + + H ++K L
Sbjct: 74 LTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIG 132
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV--GRSHAAHSI 189
+ QV +G++YL + + +HRDL N ++ VK+ D G A + ++ H+
Sbjct: 133 FGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNK 189
Query: 190 IGTP---EYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV 245
G ++MA E L + +T D++SFG+ L E++T P + I + G
Sbjct: 190 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 249
Query: 246 KPQALNKVKDPEVKAFIEKCIAQPRARPSASELL 279
+ DP + ++ + RPS SEL+
Sbjct: 250 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 283
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 122/274 (44%), Gaps = 19/274 (6%)
Query: 17 VEVDPSGRFGRYSDLLGSGAVKKVYRA--FDQE-EGIEVAWNQV-RLSHFSEDPVLVNRL 72
V + PS +++++G G VY D + + I A + R++ E V++
Sbjct: 22 VVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE----VSQF 77
Query: 73 HSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRH-VSIKALKK 131
+E +++ + ++ + L + + L + G+LR + + H ++K L
Sbjct: 78 LTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIG 136
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV--GRSHAAHSI 189
+ QV +G++YL + + +HRDL N ++ VK+ D G A + ++ H+
Sbjct: 137 FGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNK 193
Query: 190 IGTP---EYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV 245
G ++MA E L + +T D++SFG+ L E++T P + I + G
Sbjct: 194 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 253
Query: 246 KPQALNKVKDPEVKAFIEKCIAQPRARPSASELL 279
+ DP + ++ + RPS SEL+
Sbjct: 254 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 287
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 122/274 (44%), Gaps = 19/274 (6%)
Query: 17 VEVDPSGRFGRYSDLLGSGAVKKVYRA--FDQE-EGIEVAWNQV-RLSHFSEDPVLVNRL 72
V + PS +++++G G VY D + + I A + R++ E V++
Sbjct: 23 VVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE----VSQF 78
Query: 73 HSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRH-VSIKALKK 131
+E +++ + ++ + L + + L + G+LR + + H ++K L
Sbjct: 79 LTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIG 137
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV--GRSHAAHSI 189
+ QV +G++YL + + +HRDL N ++ VK+ D G A + ++ H+
Sbjct: 138 FGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNK 194
Query: 190 IGTP---EYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV 245
G ++MA E L + +T D++SFG+ L E++T P + I + G
Sbjct: 195 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 254
Query: 246 KPQALNKVKDPEVKAFIEKCIAQPRARPSASELL 279
+ DP + ++ + RPS SEL+
Sbjct: 255 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 41/220 (18%)
Query: 74 SEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKK 131
E Q+++ L+++ ++ Y+V + + E + G L + K +++ + L
Sbjct: 62 QEAQVMKKLRHEKLVQLYAV---VSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVD 118
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV------GRSHA 185
+ Q+ G+ Y+ +HRDL +NI + N+ K+ D G A ++ R A
Sbjct: 119 MAAQIASGMAYVERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGA 175
Query: 186 AHSIIGTPEYMAPE--LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSE------CDSVAK 236
I ++ APE LY +T D++SFG+ L E+ T +PY D V +
Sbjct: 176 KFPI----KWTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Query: 237 IYKKVTGGVKPQALNKV------KDPE-------VKAFIE 263
Y+ P++L+ + KDPE ++AF+E
Sbjct: 231 GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 17 VEVDPSGRFGRYSDLLGSGAVKKVYRA--FDQE-EGIEVAWNQV-RLSHFSEDPVLVNRL 72
V + PS +++++G G VY D + + I A + R++ E V++
Sbjct: 22 VVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE----VSQF 77
Query: 73 HSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRH-VSIKALKK 131
+E +++ + ++ + L + + L + G+LR + + H ++K L
Sbjct: 78 LTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIG 136
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV--GRSHAAHSI 189
+ QV +G++YL + + +HRDL N ++ VK+ D G A + + H+
Sbjct: 137 FGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEXXSVHNK 193
Query: 190 IGTP---EYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV 245
G ++MA E L + +T D++SFG+ L E++T P + I + G
Sbjct: 194 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 253
Query: 246 KPQALNKVKDPEVKAFIEKCIAQPRARPSASELL 279
+ DP + ++ + RPS SEL+
Sbjct: 254 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 287
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 111/260 (42%), Gaps = 26/260 (10%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV-------RLSHFSEDPVLVNRLHSEVQLLRTLK 83
+ SG+ V D E GI VA +V R + D L R+ E++LL
Sbjct: 29 FISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFH 87
Query: 84 NKYIIVCYSVWL---DDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ I+ +++ + + L +TE+ + + + +S + ++ + +L GL
Sbjct: 88 HPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGL 147
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFA----AIVGRSHAAHSIIGTPEYM 196
LH E ++HRDL+ NI + N + I D A A ++H + Y
Sbjct: 148 HVLH--EAGVVHRDLHPGNILLADN-NDITICDFNLAREDTADANKTH----YVTHRWYR 200
Query: 197 APELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYK--KVTGGVKPQALNK 252
APEL + +T++VD++S G + EM + + ++ K +V G K + +
Sbjct: 201 APELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVM 260
Query: 253 VKDPEVKAFIEKCIAQPRAR 272
P + ++ ++ AR
Sbjct: 261 FSSPSARDYLRNSLSNVPAR 280
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 24/141 (17%)
Query: 102 LNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH------EPCIIHRDL 155
L +++ G+L Y ++ V+++ + K + GL +LH +P I HRDL
Sbjct: 115 LWLVSDYHEHGSLFDYLNRYT-VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDL 173
Query: 156 NCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI-------IGTPEYMAPELYEEDYT-- 206
NI + N G I DLG A V A +I +GT YMAPE+ ++
Sbjct: 174 KSKNILVKKN-GTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMK 230
Query: 207 -----EMVDIYSFGLCLLEMV 222
+ DIY+ GL E+
Sbjct: 231 HFESFKRADIYAMGLVFWEIA 251
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 111/260 (42%), Gaps = 26/260 (10%)
Query: 31 LLGSGAVKKVYRAFDQEEGIEVAWNQV-------RLSHFSEDPVLVNRLHSEVQLLRTLK 83
+ SG+ V D E GI VA +V R + D L R+ E++LL
Sbjct: 29 FISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFH 87
Query: 84 NKYIIVCYSVWL---DDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL 140
+ I+ +++ + + L +TE+ + + + +S + ++ + +L GL
Sbjct: 88 HPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGL 147
Query: 141 EYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFA----AIVGRSHAAHSIIGTPEYM 196
LH E ++HRDL+ NI + N + I D A A ++H + Y
Sbjct: 148 HVLH--EAGVVHRDLHPGNILLADN-NDITICDFNLAREDTADANKTH----YVTHRWYR 200
Query: 197 APELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYK--KVTGGVKPQALNK 252
APEL + +T++VD++S G + EM + + ++ K +V G K + +
Sbjct: 201 APELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVM 260
Query: 253 VKDPEVKAFIEKCIAQPRAR 272
P + ++ ++ AR
Sbjct: 261 FSSPSARDYLRNSLSNVPAR 280
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 69/134 (51%), Gaps = 10/134 (7%)
Query: 104 FITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFI 162
+TE +G+L ++ +KH ++ L + + G++YL + +HRDL NI I
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS--DMGYVHRDLAARNILI 180
Query: 163 NGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTP---EYMAPE-LYEEDYTEMVDIYSFGLC 217
N N+ K+ D G A ++ AA++ G + +PE + +T D++S+G+
Sbjct: 181 NSNL-VCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 218 LLEMVTM-EIPYSE 230
L E+++ E PY E
Sbjct: 240 LWEVMSYGERPYWE 253
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 103/250 (41%), Gaps = 44/250 (17%)
Query: 69 VNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKA 128
VN H V ++ +NKY+ V D H L +++ + R + +
Sbjct: 96 VNNHHKSV-IVNPSQNKYLNVIMEYVPDTLHKVL------------KSFIRSGRSIPMNL 142
Query: 129 LKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS 188
+ + Q+ + ++H+ C HRD+ N+ +N +K+ D G A + S + +
Sbjct: 143 ISIYIYQLFRAVGFIHSLGIC--HRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVA 200
Query: 189 IIGTPEYMAPELY--EEDYTEMVDIYSFGLCLLEMVTMEIPYS---ECDSVAKIYKKVTG 243
I + Y APEL +YT +D++S G E++ + +S D + +I + +
Sbjct: 201 XICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGT 260
Query: 244 GVKPQAL------NKVKDPEVKA-----------------FIEKCIA-QPRARPSASELL 279
K Q + +V+ P +KA +E+ + +P R + E +
Sbjct: 261 PTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAM 320
Query: 280 KDPFFSELND 289
PFF L +
Sbjct: 321 AHPFFDHLRN 330
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 125/283 (44%), Gaps = 35/283 (12%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLH--SEVQLLRTLKNKYIIV 89
LG G+ VY + + +V + +E + R+ +E +++ +++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHV----------SIKALKKWSKQVLEG 139
V Q + I E+ T G+L++Y + R S+ + + + ++ +G
Sbjct: 93 LLGVVSQGQPTLV--IMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 150
Query: 140 LEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS---HAAHSIIGTPEYM 196
+ YL+ ++ +HRDL N + + VKIGD G + + + +M
Sbjct: 151 MAYLNANK--FVHRDLAARNCMVAEDF-TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 207
Query: 197 APE-LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGVKPQALNKVK 254
+PE L + +T D++SFG+ L E+ T+ E PY + + + GG+ L+K
Sbjct: 208 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL----LDKPD 263
Query: 255 D-PEVKAFIEKCIAQ--PRARPSASELLK------DPFFSELN 288
+ P++ + + Q P+ RPS E++ +P F E++
Sbjct: 264 NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVS 306
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 123/275 (44%), Gaps = 32/275 (11%)
Query: 27 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
++ D++G G +V +A +++G+ + R+ ++ + E+++L L +
Sbjct: 18 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD-FAGELEVLCKLGHHP 76
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR----------------HVSIKALK 130
I+ + + L E GNL + +K R +S + L
Sbjct: 77 NIINL-LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 135
Query: 131 KWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSII 190
++ V G++YL + IHRDL NI + N KI D G + G+ +
Sbjct: 136 HFAADVARGMDYLSQKQ--FIHRDLAARNILVGENY-VAKIADFGLSR--GQEVYVKKTM 190
Query: 191 GT--PEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGVK 246
G +MA E L YT D++S+G+ L E+V++ PY + A++Y+K+ G +
Sbjct: 191 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-TCAELYEKLPQGYR 249
Query: 247 -PQALNKVKDPEVKAFIEKCIAQ-PRARPSASELL 279
+ LN D EV + +C + P RPS +++L
Sbjct: 250 LEKPLN--CDDEVYDLMRQCWREKPYERPSFAQIL 282
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 123/275 (44%), Gaps = 32/275 (11%)
Query: 27 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
++ D++G G +V +A +++G+ + R+ ++ + E+++L L +
Sbjct: 28 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD-FAGELEVLCKLGHHP 86
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR----------------HVSIKALK 130
I+ + + L E GNL + +K R +S + L
Sbjct: 87 NIINL-LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 145
Query: 131 KWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSII 190
++ V G++YL + IHRDL NI + N KI D G + G+ +
Sbjct: 146 HFAADVARGMDYLSQKQ--FIHRDLAARNILVGENY-VAKIADFGLSR--GQEVYVKKTM 200
Query: 191 GT--PEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGVK 246
G +MA E L YT D++S+G+ L E+V++ PY + A++Y+K+ G +
Sbjct: 201 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-TCAELYEKLPQGYR 259
Query: 247 -PQALNKVKDPEVKAFIEKCIAQ-PRARPSASELL 279
+ LN D EV + +C + P RPS +++L
Sbjct: 260 LEKPLN--CDDEVYDLMRQCWREKPYERPSFAQIL 292
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 24/140 (17%)
Query: 102 LNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH------EPCIIHRDL 155
L +++ G+L Y ++ V+++ + K + GL +LH +P I HRDL
Sbjct: 76 LWLVSDYHEHGSLFDYLNRYT-VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDL 134
Query: 156 NCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI-------IGTPEYMAPELYEEDYT-- 206
NI + N G I DLG A V A +I +GT YMAPE+ ++
Sbjct: 135 KSKNILVKKN-GTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMK 191
Query: 207 -----EMVDIYSFGLCLLEM 221
+ DIY+ GL E+
Sbjct: 192 HFESFKRADIYAMGLVFWEI 211
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 24/140 (17%)
Query: 102 LNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH------EPCIIHRDL 155
L +++ G+L Y ++ V+++ + K + GL +LH +P I HRDL
Sbjct: 102 LWLVSDYHEHGSLFDYLNRYT-VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDL 160
Query: 156 NCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI-------IGTPEYMAPELYEEDYT-- 206
NI + N G I DLG A V A +I +GT YMAPE+ ++
Sbjct: 161 KSKNILVKKN-GTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMK 217
Query: 207 -----EMVDIYSFGLCLLEM 221
+ DIY+ GL E+
Sbjct: 218 HFESFKRADIYAMGLVFWEI 237
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 125/283 (44%), Gaps = 35/283 (12%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLH--SEVQLLRTLKNKYIIV 89
LG G+ VY + + +V + +E + R+ +E +++ +++
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRH----------VSIKALKKWSKQVLEG 139
V Q + I E+ T G+L++Y + R S+ + + + ++ +G
Sbjct: 78 LLGVVSQGQPTLV--IMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 135
Query: 140 LEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS---HAAHSIIGTPEYM 196
+ YL+ ++ +HRDL N + + VKIGD G + + + +M
Sbjct: 136 MAYLNANK--FVHRDLAARNCMVAEDF-TVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 192
Query: 197 APE-LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGVKPQALNKVK 254
+PE L + +T D++SFG+ L E+ T+ E PY + + + GG+ L+K
Sbjct: 193 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL----LDKPD 248
Query: 255 D-PEVKAFIEKCIAQ--PRARPSASELLK------DPFFSELN 288
+ P++ + + Q P+ RPS E++ +P F E++
Sbjct: 249 NCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVS 291
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 24/140 (17%)
Query: 102 LNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH------EPCIIHRDL 155
L +++ G+L Y ++ V+++ + K + GL +LH +P I HRDL
Sbjct: 77 LWLVSDYHEHGSLFDYLNRYT-VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDL 135
Query: 156 NCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI-------IGTPEYMAPELYEEDYT-- 206
NI + N G I DLG A V A +I +GT YMAPE+ ++
Sbjct: 136 KSKNILVKKN-GTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMK 192
Query: 207 -----EMVDIYSFGLCLLEM 221
+ DIY+ GL E+
Sbjct: 193 HFESFKRADIYAMGLVFWEI 212
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 24/140 (17%)
Query: 102 LNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH------EPCIIHRDL 155
L +++ G+L Y ++ V+++ + K + GL +LH +P I HRDL
Sbjct: 79 LWLVSDYHEHGSLFDYLNRYT-VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDL 137
Query: 156 NCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI-------IGTPEYMAPELYEEDYT-- 206
NI + N G I DLG A V A +I +GT YMAPE+ ++
Sbjct: 138 KSKNILVKKN-GTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMK 194
Query: 207 -----EMVDIYSFGLCLLEM 221
+ DIY+ GL E+
Sbjct: 195 HFESFKRADIYAMGLVFWEI 214
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 81/161 (50%), Gaps = 14/161 (8%)
Query: 75 EVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKW 132
E Q+++ L+++ ++ Y+V ++ + + E + G+L + K +++ + L
Sbjct: 229 EAQVMKKLRHEKLVQLYAVVSEE---PIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDM 285
Query: 133 SKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIG 191
+ Q+ G+ Y+ +HRDL +NI + N+ K+ D G A ++ + A
Sbjct: 286 AAQIASGMAYVERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGAK 342
Query: 192 TP-EYMAPE--LYEEDYTEMVDIYSFGLCLLEMVTM-EIPY 228
P ++ APE LY +T D++SFG+ L E+ T +PY
Sbjct: 343 FPIKWTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPY 382
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 114/276 (41%), Gaps = 55/276 (19%)
Query: 65 DPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQH--------------NTLN-FI---- 105
+P V R+ +EV+L++ L + I Y V+ D+Q+ + LN FI
Sbjct: 68 NPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDST 127
Query: 106 ---------TEVC---------TSGNLRTYRKKHRHVSI-KALKKWSKQVLEGLEYLHTH 146
T++C +G++ +R+ V K + +Q+ L YLH
Sbjct: 128 GKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ 187
Query: 147 EPCIIHRDLNCSNIFINGNIG-QVKIGDLGFAAIV-----GRSHAAHSIIGTPEYMAPEL 200
C HRD+ N + N ++K+ D G + G + + GTP ++APE+
Sbjct: 188 GIC--HRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEV 245
Query: 201 Y---EEDYTEMVDIYSFGLCLLEMVTMEIPY---SECDSVAKIYKKVTGGVKPQALNKVK 254
E Y D +S G+ L ++ +P+ ++ D+++++ K P V
Sbjct: 246 LNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNY--NVL 303
Query: 255 DPEVKAFIEKCIAQP-RARPSASELLKDPFFSELND 289
P + + + + R A L+ P+ S+ +D
Sbjct: 304 SPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSD 339
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 97/220 (44%), Gaps = 19/220 (8%)
Query: 75 EVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-------HVSIK 127
E ++ L ++ I+ C V L Q + E+ G+L+++ ++ R +++
Sbjct: 98 EALIISKLNHQNIVRCIGVSL--QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 155
Query: 128 ALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFIN--GNIGQVKIGDLGFAAIVGRS-- 183
L ++ + G +YL + IHRD+ N + G KIGD G A + R+
Sbjct: 156 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 213
Query: 184 -HAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTME-IPYSECDSVAKIYKK 240
+ ++M PE + E +T D +SFG+ L E+ ++ +PY S ++ +
Sbjct: 214 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEF 272
Query: 241 VTGGVKPQALNKVKDPEVKAFIEKCIAQPRARPSASELLK 280
VT G + P + + QP RP+ + +L+
Sbjct: 273 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 312
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 24/140 (17%)
Query: 102 LNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH------EPCIIHRDL 155
L +++ G+L Y ++ V+++ + K + GL +LH +P I HRDL
Sbjct: 82 LWLVSDYHEHGSLFDYLNRYT-VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDL 140
Query: 156 NCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI-------IGTPEYMAPELYEEDYT-- 206
NI + N G I DLG A V A +I +GT YMAPE+ ++
Sbjct: 141 KSKNILVKKN-GTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMK 197
Query: 207 -----EMVDIYSFGLCLLEM 221
+ DIY+ GL E+
Sbjct: 198 HFESFKRADIYAMGLVFWEI 217
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 97/220 (44%), Gaps = 19/220 (8%)
Query: 75 EVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-------HVSIK 127
E ++ L ++ I+ C V L Q + E+ G+L+++ ++ R +++
Sbjct: 84 EALIISKLNHQNIVRCIGVSL--QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 141
Query: 128 ALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFIN--GNIGQVKIGDLGFAAIVGRS-- 183
L ++ + G +YL + IHRD+ N + G KIGD G A + R+
Sbjct: 142 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 199
Query: 184 -HAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTME-IPYSECDSVAKIYKK 240
+ ++M PE + E +T D +SFG+ L E+ ++ +PY S ++ +
Sbjct: 200 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEF 258
Query: 241 VTGGVKPQALNKVKDPEVKAFIEKCIAQPRARPSASELLK 280
VT G + P + + QP RP+ + +L+
Sbjct: 259 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 298
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 125/283 (44%), Gaps = 35/283 (12%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLH--SEVQLLRTLKNKYIIV 89
LG G+ VY + + +V + +E + R+ +E +++ +++
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHV----------SIKALKKWSKQVLEG 139
V Q + I E+ T G+L++Y + R S+ + + + ++ +G
Sbjct: 83 LLGVVSQGQPTLV--IMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 140
Query: 140 LEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS---HAAHSIIGTPEYM 196
+ YL+ ++ +HRDL N + + VKIGD G + + + +M
Sbjct: 141 MAYLNANK--FVHRDLAARNCMVAEDF-TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 197
Query: 197 APE-LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGVKPQALNKVK 254
+PE L + +T D++SFG+ L E+ T+ E PY + + + GG+ L+K
Sbjct: 198 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL----LDKPD 253
Query: 255 D-PEVKAFIEKCIAQ--PRARPSASELLK------DPFFSELN 288
+ P++ + + Q P+ RPS E++ +P F E++
Sbjct: 254 NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVS 296
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 69/134 (51%), Gaps = 10/134 (7%)
Query: 104 FITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFI 162
+TE +G+L ++ +KH ++ L + + G++YL + +HRDL NI I
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS--DMGFVHRDLAARNILI 180
Query: 163 NGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTP---EYMAPE-LYEEDYTEMVDIYSFGLC 217
N N+ K+ D G + ++ AA++ G + +PE + +T D++S+G+
Sbjct: 181 NSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 218 LLEMVTM-EIPYSE 230
L E+++ E PY E
Sbjct: 240 LWEVMSYGERPYWE 253
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 125/283 (44%), Gaps = 35/283 (12%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLH--SEVQLLRTLKNKYIIV 89
LG G+ VY + + +V + +E + R+ +E +++ +++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRH----------VSIKALKKWSKQVLEG 139
V Q + I E+ T G+L++Y + R S+ + + + ++ +G
Sbjct: 87 LLGVVSQGQPTLV--IMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 140 LEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS---HAAHSIIGTPEYM 196
+ YL+ ++ +HRDL N + + VKIGD G + + + +M
Sbjct: 145 MAYLNANK--FVHRDLAARNCMVAEDF-TVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 201
Query: 197 APE-LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGVKPQALNKVK 254
+PE L + +T D++SFG+ L E+ T+ E PY + + + GG+ L+K
Sbjct: 202 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL----LDKPD 257
Query: 255 D-PEVKAFIEKCIAQ--PRARPSASELLK------DPFFSELN 288
+ P++ + + Q P+ RPS E++ +P F E++
Sbjct: 258 NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVS 300
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 69/134 (51%), Gaps = 10/134 (7%)
Query: 104 FITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFI 162
+TE +G+L ++ +KH ++ L + + G++YL + +HRDL NI I
Sbjct: 123 IVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS--DMGAVHRDLAARNILI 180
Query: 163 NGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTP---EYMAPE-LYEEDYTEMVDIYSFGLC 217
N N+ K+ D G + ++ AA++ G + +PE + +T D++S+G+
Sbjct: 181 NSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 218 LLEMVTM-EIPYSE 230
L E+++ E PY E
Sbjct: 240 LWEVMSYGERPYWE 253
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 69/134 (51%), Gaps = 10/134 (7%)
Query: 104 FITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFI 162
+TE +G+L ++ +KH ++ L + + G++YL + +HRDL NI I
Sbjct: 94 IVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS--DMGYVHRDLAARNILI 151
Query: 163 NGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTP---EYMAPE-LYEEDYTEMVDIYSFGLC 217
N N+ K+ D G + ++ AA++ G + +PE + +T D++S+G+
Sbjct: 152 NSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 210
Query: 218 LLEMVTM-EIPYSE 230
L E+++ E PY E
Sbjct: 211 LWEVMSYGERPYWE 224
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 69/134 (51%), Gaps = 10/134 (7%)
Query: 104 FITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFI 162
+TE +G+L ++ +KH ++ L + + G++YL + +HRDL NI I
Sbjct: 123 IVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS--DMGYVHRDLAARNILI 180
Query: 163 NGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTP---EYMAPE-LYEEDYTEMVDIYSFGLC 217
N N+ K+ D G + ++ AA++ G + +PE + +T D++S+G+
Sbjct: 181 NSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 218 LLEMVTM-EIPYSE 230
L E+++ E PY E
Sbjct: 240 LWEVMSYGERPYWE 253
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 69/134 (51%), Gaps = 10/134 (7%)
Query: 104 FITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFI 162
+TE +G+L ++ +KH ++ L + + G++YL + +HRDL NI I
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS--DMGYVHRDLAARNILI 180
Query: 163 NGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTP---EYMAPE-LYEEDYTEMVDIYSFGLC 217
N N+ K+ D G + ++ AA++ G + +PE + +T D++S+G+
Sbjct: 181 NSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 218 LLEMVTM-EIPYSE 230
L E+++ E PY E
Sbjct: 240 LWEVMSYGERPYWE 253
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 69/134 (51%), Gaps = 10/134 (7%)
Query: 104 FITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFI 162
+TE +G+L ++ +KH ++ L + + G++YL + +HRDL NI I
Sbjct: 94 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS--DMGYVHRDLAARNILI 151
Query: 163 NGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTP---EYMAPE-LYEEDYTEMVDIYSFGLC 217
N N+ K+ D G + ++ AA++ G + +PE + +T D++S+G+
Sbjct: 152 NSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 210
Query: 218 LLEMVTM-EIPYSE 230
L E+++ E PY E
Sbjct: 211 LWEVMSYGERPYWE 224
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 69/134 (51%), Gaps = 10/134 (7%)
Query: 104 FITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFI 162
+TE +G+L ++ +KH ++ L + + G++YL + +HRDL NI I
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS--DMGYVHRDLAARNILI 180
Query: 163 NGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTP---EYMAPE-LYEEDYTEMVDIYSFGLC 217
N N+ K+ D G + ++ AA++ G + +PE + +T D++S+G+
Sbjct: 181 NSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 218 LLEMVTM-EIPYSE 230
L E+++ E PY E
Sbjct: 240 LWEVMSYGERPYWE 253
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 69/134 (51%), Gaps = 10/134 (7%)
Query: 104 FITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFI 162
+TE +G+L ++ +KH ++ L + + G++YL + +HRDL NI I
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS--DMGYVHRDLAARNILI 180
Query: 163 NGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTP---EYMAPE-LYEEDYTEMVDIYSFGLC 217
N N+ K+ D G + ++ AA++ G + +PE + +T D++S+G+
Sbjct: 181 NSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 218 LLEMVTM-EIPYSE 230
L E+++ E PY E
Sbjct: 240 LWEVMSYGERPYWE 253
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 125/283 (44%), Gaps = 35/283 (12%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLH--SEVQLLRTLKNKYIIV 89
LG G+ VY + + +V + +E + R+ +E +++ +++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRH----------VSIKALKKWSKQVLEG 139
V Q + I E+ T G+L++Y + R S+ + + + ++ +G
Sbjct: 80 LLGVVSQGQPTLV--IMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 140 LEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS---HAAHSIIGTPEYM 196
+ YL+ ++ +HRDL N + + VKIGD G + + + +M
Sbjct: 138 MAYLNANK--FVHRDLAARNCMVAEDF-TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 194
Query: 197 APE-LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGVKPQALNKVK 254
+PE L + +T D++SFG+ L E+ T+ E PY + + + GG+ L+K
Sbjct: 195 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL----LDKPD 250
Query: 255 D-PEVKAFIEKCIAQ--PRARPSASELLK------DPFFSELN 288
+ P++ + + Q P+ RPS E++ +P F E++
Sbjct: 251 NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVS 293
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 69/134 (51%), Gaps = 10/134 (7%)
Query: 104 FITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFI 162
+TE +G+L ++ +KH ++ L + + G++YL + +HRDL NI I
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS--DMGYVHRDLAARNILI 180
Query: 163 NGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTP---EYMAPE-LYEEDYTEMVDIYSFGLC 217
N N+ K+ D G + ++ AA++ G + +PE + +T D++S+G+
Sbjct: 181 NSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 218 LLEMVTM-EIPYSE 230
L E+++ E PY E
Sbjct: 240 LWEVMSYGERPYWE 253
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 125/283 (44%), Gaps = 35/283 (12%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLH--SEVQLLRTLKNKYIIV 89
LG G+ VY + + +V + +E + R+ +E +++ +++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRH----------VSIKALKKWSKQVLEG 139
V Q + I E+ T G+L++Y + R S+ + + + ++ +G
Sbjct: 93 LLGVVSQGQPTLV--IMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 150
Query: 140 LEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS---HAAHSIIGTPEYM 196
+ YL+ ++ +HRDL N + + VKIGD G + + + +M
Sbjct: 151 MAYLNANK--FVHRDLAARNCMVAEDF-TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 207
Query: 197 APE-LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGVKPQALNKVK 254
+PE L + +T D++SFG+ L E+ T+ E PY + + + GG+ L+K
Sbjct: 208 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL----LDKPD 263
Query: 255 D-PEVKAFIEKCIAQ--PRARPSASELLK------DPFFSELN 288
+ P++ + + Q P+ RPS E++ +P F E++
Sbjct: 264 NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVS 306
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 17 VEVDPSGRFGRYSDLLGSGAVKKVYRA--FDQE-EGIEVAWNQV-RLSHFSEDPVLVNRL 72
V + PS +++++G G VY D + + I A + R++ E V++
Sbjct: 24 VVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE----VSQF 79
Query: 73 HSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRH-VSIKALKK 131
+E +++ + ++ + L + + L + G+LR + + H ++K L
Sbjct: 80 LTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIG 138
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFA--AIVGRSHAAHSI 189
+ QV +G+++L + + +HRDL N ++ VK+ D G A + + H+
Sbjct: 139 FGLQVAKGMKFLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMLDKEFDSVHNK 195
Query: 190 IGTP---EYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV 245
G ++MA E L + +T D++SFG+ L E++T P + I + G
Sbjct: 196 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 255
Query: 246 KPQALNKVKDPEVKAFIEKCIAQPRARPSASELL 279
+ DP + ++ + RPS SEL+
Sbjct: 256 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 289
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 69/134 (51%), Gaps = 10/134 (7%)
Query: 104 FITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFI 162
+TE +G+L ++ +KH ++ L + + G++YL + +HRDL NI I
Sbjct: 111 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS--DMGYVHRDLAARNILI 168
Query: 163 NGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTP---EYMAPE-LYEEDYTEMVDIYSFGLC 217
N N+ K+ D G + ++ AA++ G + +PE + +T D++S+G+
Sbjct: 169 NSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 227
Query: 218 LLEMVTM-EIPYSE 230
L E+++ E PY E
Sbjct: 228 LWEVMSYGERPYWE 241
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 69/134 (51%), Gaps = 10/134 (7%)
Query: 104 FITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFI 162
+TE +G+L ++ +KH ++ L + + G++YL + +HRDL NI I
Sbjct: 121 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS--DMGYVHRDLAARNILI 178
Query: 163 NGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTP---EYMAPE-LYEEDYTEMVDIYSFGLC 217
N N+ K+ D G + ++ AA++ G + +PE + +T D++S+G+
Sbjct: 179 NSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 237
Query: 218 LLEMVTM-EIPYSE 230
L E+++ E PY E
Sbjct: 238 LWEVMSYGERPYWE 251
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 10/134 (7%)
Query: 104 FITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFI 162
+TE +G+L ++ +KH ++ L + + G++YL + +HRDL NI I
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS--DMGYVHRDLAARNILI 180
Query: 163 NGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTP---EYMAPE-LYEEDYTEMVDIYSFGLC 217
N N+ K+ D G ++ AA++ G + +PE + +T D++S+G+
Sbjct: 181 NSNL-VCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 218 LLEMVTM-EIPYSE 230
L E+++ E PY E
Sbjct: 240 LWEVMSYGERPYWE 253
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 125/283 (44%), Gaps = 35/283 (12%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLH--SEVQLLRTLKNKYIIV 89
LG G+ VY + + +V + +E + R+ +E +++ +++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRH----------VSIKALKKWSKQVLEG 139
V Q + I E+ T G+L++Y + R S+ + + + ++ +G
Sbjct: 87 LLGVVSQGQPTLV--IMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 140 LEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS---HAAHSIIGTPEYM 196
+ YL+ ++ +HRDL N + + VKIGD G + + + +M
Sbjct: 145 MAYLNANK--FVHRDLAARNCMVAEDF-TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 201
Query: 197 APE-LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGVKPQALNKVK 254
+PE L + +T D++SFG+ L E+ T+ E PY + + + GG+ L+K
Sbjct: 202 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL----LDKPD 257
Query: 255 D-PEVKAFIEKCIAQ--PRARPSASELLK------DPFFSELN 288
+ P++ + + Q P+ RPS E++ +P F E++
Sbjct: 258 NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVS 300
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 19/220 (8%)
Query: 75 EVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-------HVSIK 127
E ++ ++ I+ C V L Q + E+ G+L+++ ++ R +++
Sbjct: 75 EALIISKFNHQNIVRCIGVSL--QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 132
Query: 128 ALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFIN--GNIGQVKIGDLGFAAIVGRS-- 183
L ++ + G +YL + IHRD+ N + G KIGD G A + R+
Sbjct: 133 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 190
Query: 184 -HAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTME-IPYSECDSVAKIYKK 240
+ ++M PE + E +T D +SFG+ L E+ ++ +PY S ++ +
Sbjct: 191 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEF 249
Query: 241 VTGGVKPQALNKVKDPEVKAFIEKCIAQPRARPSASELLK 280
VT G + P + + QP RP+ + +L+
Sbjct: 250 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 289
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 125/283 (44%), Gaps = 35/283 (12%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLH--SEVQLLRTLKNKYIIV 89
LG G+ VY + + +V + +E + R+ +E +++ +++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRH----------VSIKALKKWSKQVLEG 139
V Q + I E+ T G+L++Y + R S+ + + + ++ +G
Sbjct: 86 LLGVVSQGQPTLV--IMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 140 LEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS---HAAHSIIGTPEYM 196
+ YL+ ++ +HRDL N + + VKIGD G + + + +M
Sbjct: 144 MAYLNANK--FVHRDLAARNCMVAEDF-TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 197 APE-LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGVKPQALNKVK 254
+PE L + +T D++SFG+ L E+ T+ E PY + + + GG+ L+K
Sbjct: 201 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL----LDKPD 256
Query: 255 D-PEVKAFIEKCIAQ--PRARPSASELLK------DPFFSELN 288
+ P++ + + Q P+ RPS E++ +P F E++
Sbjct: 257 NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVS 299
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 19/220 (8%)
Query: 75 EVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-------HVSIK 127
E ++ ++ I+ C V L Q + E+ G+L+++ ++ R +++
Sbjct: 98 EALIISKFNHQNIVRCIGVSL--QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAML 155
Query: 128 ALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFIN--GNIGQVKIGDLGFAAIVGRS-- 183
L ++ + G +YL + IHRD+ N + G KIGD G A + R+
Sbjct: 156 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 213
Query: 184 -HAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTME-IPYSECDSVAKIYKK 240
+ ++M PE + E +T D +SFG+ L E+ ++ +PY S ++ +
Sbjct: 214 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEF 272
Query: 241 VTGGVKPQALNKVKDPEVKAFIEKCIAQPRARPSASELLK 280
VT G + P + + QP RP+ + +L+
Sbjct: 273 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 312
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 125/283 (44%), Gaps = 35/283 (12%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLH--SEVQLLRTLKNKYIIV 89
LG G+ VY + + +V + +E + R+ +E +++ +++
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRH----------VSIKALKKWSKQVLEG 139
V Q + I E+ T G+L++Y + R S+ + + + ++ +G
Sbjct: 84 LLGVVSQGQPTLV--IMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 141
Query: 140 LEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS---HAAHSIIGTPEYM 196
+ YL+ ++ +HRDL N + + VKIGD G + + + +M
Sbjct: 142 MAYLNANK--FVHRDLAARNCMVAEDF-TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 198
Query: 197 APE-LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGVKPQALNKVK 254
+PE L + +T D++SFG+ L E+ T+ E PY + + + GG+ L+K
Sbjct: 199 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL----LDKPD 254
Query: 255 D-PEVKAFIEKCIAQ--PRARPSASELLK------DPFFSELN 288
+ P++ + + Q P+ RPS E++ +P F E++
Sbjct: 255 NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVS 297
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 19/220 (8%)
Query: 75 EVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-------HVSIK 127
E ++ ++ I+ C V L Q + E+ G+L+++ ++ R +++
Sbjct: 83 EALIISKFNHQNIVRCIGVSL--QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAML 140
Query: 128 ALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFIN--GNIGQVKIGDLGFAAIVGRS-- 183
L ++ + G +YL + IHRD+ N + G KIGD G A + R+
Sbjct: 141 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 198
Query: 184 -HAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTME-IPYSECDSVAKIYKK 240
+ ++M PE + E +T D +SFG+ L E+ ++ +PY S ++ +
Sbjct: 199 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEF 257
Query: 241 VTGGVKPQALNKVKDPEVKAFIEKCIAQPRARPSASELLK 280
VT G + P + + QP RP+ + +L+
Sbjct: 258 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 297
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 19/220 (8%)
Query: 75 EVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-------HVSIK 127
E ++ ++ I+ C V L Q + E+ G+L+++ ++ R +++
Sbjct: 84 EALIISKFNHQNIVRCIGVSL--QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 141
Query: 128 ALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFIN--GNIGQVKIGDLGFAAIVGRS-- 183
L ++ + G +YL + IHRD+ N + G KIGD G A + R+
Sbjct: 142 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASY 199
Query: 184 -HAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTME-IPYSECDSVAKIYKK 240
+ ++M PE + E +T D +SFG+ L E+ ++ +PY S ++ +
Sbjct: 200 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEF 258
Query: 241 VTGGVKPQALNKVKDPEVKAFIEKCIAQPRARPSASELLK 280
VT G + P + + QP RP+ + +L+
Sbjct: 259 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 298
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 17 VEVDPSGRFGRYSDLLGSGAVKKVYRA--FDQE-EGIEVAWNQV-RLSHFSEDPVLVNRL 72
V + PS +++++G G VY D + + I A + R++ E V++
Sbjct: 82 VVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE----VSQF 137
Query: 73 HSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRH-VSIKALKK 131
+E +++ + ++ + L + + L + G+LR + + H ++K L
Sbjct: 138 LTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIG 196
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV--GRSHAAHSI 189
+ QV +G+++L + + +HRDL N ++ VK+ D G A + + H+
Sbjct: 197 FGLQVAKGMKFLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEFDSVHNK 253
Query: 190 IGTP---EYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV 245
G ++MA E L + +T D++SFG+ L E++T P + I + G
Sbjct: 254 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 313
Query: 246 KPQALNKVKDPEVKAFIEKCIAQPRARPSASELL 279
+ DP + ++ + RPS SEL+
Sbjct: 314 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 347
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 77/159 (48%), Gaps = 10/159 (6%)
Query: 74 SEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTY-RKKHRHV-SIKALKK 131
+E ++ L++ ++ V ++++ L +TE G+L Y R + R V L K
Sbjct: 63 AEASVMTQLRHSNLVQLLGVIVEEK-GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 121
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIG 191
+S V E +EYL + +HRDL N+ ++ + K+ D G + +
Sbjct: 122 FSLDVCEAMEYLEGNN--FVHRDLAARNVLVSED-NVAKVSDFGLTKEASSTQDTGKL-- 176
Query: 192 TPEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTM-EIPY 228
++ APE L E+ ++ D++SFG+ L E+ + +PY
Sbjct: 177 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 215
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 112/286 (39%), Gaps = 62/286 (21%)
Query: 68 LVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIK 127
+V L E+ + + + I+ + ++ D N L +T G+ + H +
Sbjct: 69 MVTFLQGELHVSKLFNHPNIVPYRATFIAD--NELWVVTSFMAYGSAKDLICTHFMDGMN 126
Query: 128 --ALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDL-GFAAIVGRSH 184
A+ + VL+ L+Y+H +HR + S+I I+ + G+V + L +++
Sbjct: 127 ELAIAYILQGVLKALDYIH--HMGYVHRSVKASHILISVD-GKVYLSGLRSNLSMISHGQ 183
Query: 185 AAHSIIGTPEY-------MAPELYEED---YTEMVDIYSFGLCLLEMVTMEIPYSECDSV 234
+ P+Y ++PE+ +++ Y DIYS G+ E+ +P+ + +
Sbjct: 184 RQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPAT 243
Query: 235 AKIYKKVTGGV----------------------------------KPQALN--------- 251
+ +K+ G V P+ N
Sbjct: 244 QMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYH 303
Query: 252 KVKDPEVKAFIEKCIAQ-PRARPSASELLKDPFFSELNDDDSEPSP 296
+ P F+E+C+ + P ARPSAS LL FF ++ SE P
Sbjct: 304 RTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRASEALP 349
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 125/283 (44%), Gaps = 35/283 (12%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLH--SEVQLLRTLKNKYIIV 89
LG G+ VY + + +V + +E + R+ +E +++ +++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRH----------VSIKALKKWSKQVLEG 139
V Q + I E+ T G+L++Y + R S+ + + + ++ +G
Sbjct: 86 LLGVVSQGQPTLV--IMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 140 LEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS---HAAHSIIGTPEYM 196
+ YL+ ++ +HRDL N + + VKIGD G + + + +M
Sbjct: 144 MAYLNANK--FVHRDLAARNCMVAEDF-TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 197 APE-LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGVKPQALNKVK 254
+PE L + +T D++SFG+ L E+ T+ E PY + + + GG+ L+K
Sbjct: 201 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL----LDKPD 256
Query: 255 D-PEVKAFIEKCIAQ--PRARPSASELLK------DPFFSELN 288
+ P++ + + Q P+ RPS E++ +P F E++
Sbjct: 257 NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVS 299
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 10/134 (7%)
Query: 104 FITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFI 162
+TE +G+L T+ KK+ ++ L + + G++YL + +HRDL NI I
Sbjct: 100 IVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLS--DMGYVHRDLAARNILI 157
Query: 163 NGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTP---EYMAPE-LYEEDYTEMVDIYSFGLC 217
N N+ K+ D G + ++ AA++ G + APE + +T D++S+G+
Sbjct: 158 NSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIV 216
Query: 218 LLEMVTM-EIPYSE 230
+ E+V+ E PY E
Sbjct: 217 MWEVVSYGERPYWE 230
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 19/220 (8%)
Query: 75 EVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-------HVSIK 127
E ++ ++ I+ C V L Q + E+ G+L+++ ++ R +++
Sbjct: 98 EALIISKFNHQNIVRCIGVSL--QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 155
Query: 128 ALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFIN--GNIGQVKIGDLGFAAIVGRS-- 183
L ++ + G +YL + IHRD+ N + G KIGD G A + R+
Sbjct: 156 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 213
Query: 184 -HAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTME-IPYSECDSVAKIYKK 240
+ ++M PE + E +T D +SFG+ L E+ ++ +PY S ++ +
Sbjct: 214 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEF 272
Query: 241 VTGGVKPQALNKVKDPEVKAFIEKCIAQPRARPSASELLK 280
VT G + P + + QP RP+ + +L+
Sbjct: 273 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 312
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 19/220 (8%)
Query: 75 EVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-------HVSIK 127
E ++ ++ I+ C V L Q + E+ G+L+++ ++ R +++
Sbjct: 84 EALIISKFNHQNIVRCIGVSL--QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 141
Query: 128 ALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFIN--GNIGQVKIGDLGFAAIVGRS-- 183
L ++ + G +YL + IHRD+ N + G KIGD G A + R+
Sbjct: 142 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 199
Query: 184 -HAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTME-IPYSECDSVAKIYKK 240
+ ++M PE + E +T D +SFG+ L E+ ++ +PY S ++ +
Sbjct: 200 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEF 258
Query: 241 VTGGVKPQALNKVKDPEVKAFIEKCIAQPRARPSASELLK 280
VT G + P + + QP RP+ + +L+
Sbjct: 259 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 298
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 19/220 (8%)
Query: 75 EVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-------HVSIK 127
E ++ ++ I+ C V L Q + E+ G+L+++ ++ R +++
Sbjct: 83 EALIISKFNHQNIVRCIGVSL--QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 140
Query: 128 ALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFIN--GNIGQVKIGDLGFAAIVGRS-- 183
L ++ + G +YL + IHRD+ N + G KIGD G A + R+
Sbjct: 141 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 198
Query: 184 -HAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTME-IPYSECDSVAKIYKK 240
+ ++M PE + E +T D +SFG+ L E+ ++ +PY S ++ +
Sbjct: 199 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEF 257
Query: 241 VTGGVKPQALNKVKDPEVKAFIEKCIAQPRARPSASELLK 280
VT G + P + + QP RP+ + +L+
Sbjct: 258 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 297
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 15/142 (10%)
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGN-IGQVKIGDLGFA-AIVGRSHAAHSIIGTPEYM 196
G +LHT EP I LN ++ I+ + ++ D+ F+ GR +A P ++
Sbjct: 123 GXAFLHTLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXYA-------PAWV 175
Query: 197 APELY----EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNK 252
APE E+ D +SF + L E+VT E+P+++ + K G++P
Sbjct: 176 APEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRPTIPPG 235
Query: 253 VKDPEVKAFIEKCIAQ-PRARP 273
+ P V + C + P RP
Sbjct: 236 I-SPHVSKLXKICXNEDPAKRP 256
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 112/286 (39%), Gaps = 62/286 (21%)
Query: 68 LVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIK 127
+V L E+ + + + I+ + ++ D N L +T G+ + H +
Sbjct: 53 MVTFLQGELHVSKLFNHPNIVPYRATFIAD--NELWVVTSFMAYGSAKDLICTHFMDGMN 110
Query: 128 --ALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDL-GFAAIVGRSH 184
A+ + VL+ L+Y+H +HR + S+I I+ + G+V + L +++
Sbjct: 111 ELAIAYILQGVLKALDYIH--HMGYVHRSVKASHILISVD-GKVYLSGLRSNLSMISHGQ 167
Query: 185 AAHSIIGTPEY-------MAPELYEED---YTEMVDIYSFGLCLLEMVTMEIPYSECDSV 234
+ P+Y ++PE+ +++ Y DIYS G+ E+ +P+ + +
Sbjct: 168 RQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPAT 227
Query: 235 AKIYKKVTGGV----------------------------------KPQALN--------- 251
+ +K+ G V P+ N
Sbjct: 228 QMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYH 287
Query: 252 KVKDPEVKAFIEKCIAQ-PRARPSASELLKDPFFSELNDDDSEPSP 296
+ P F+E+C+ + P ARPSAS LL FF ++ SE P
Sbjct: 288 RTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRASEALP 333
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 19/220 (8%)
Query: 75 EVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-------HVSIK 127
E ++ ++ I+ C V L Q + E+ G+L+++ ++ R +++
Sbjct: 101 EALIISKFNHQNIVRCIGVSL--QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 158
Query: 128 ALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFIN--GNIGQVKIGDLGFAAIVGRS-- 183
L ++ + G +YL + IHRD+ N + G KIGD G A + R+
Sbjct: 159 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGY 216
Query: 184 -HAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTME-IPYSECDSVAKIYKK 240
+ ++M PE + E +T D +SFG+ L E+ ++ +PY S ++ +
Sbjct: 217 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEF 275
Query: 241 VTGGVKPQALNKVKDPEVKAFIEKCIAQPRARPSASELLK 280
VT G + P + + QP RP+ + +L+
Sbjct: 276 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 315
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 98/208 (47%), Gaps = 31/208 (14%)
Query: 105 ITEVCTSGNLRTYRKKHRH----------VSIKALKKWSKQVLEGLEYLHTHEPCIIHRD 154
I E+ T G+L++Y + R S+ + + + ++ +G+ YL+ ++ +HRD
Sbjct: 128 IMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRD 185
Query: 155 LNCSNIFINGNIGQVKIGDLGFAAIVGRS---HAAHSIIGTPEYMAPE-LYEEDYTEMVD 210
L N + + VKIGD G + + + +M+PE L + +T D
Sbjct: 186 LAARNCMVAEDF-TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSD 244
Query: 211 IYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGVKPQALNKVKD-PEVKAFIEKCIAQ 268
++SFG+ L E+ T+ E PY + + + GG+ L+K + P++ + + Q
Sbjct: 245 VWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL----LDKPDNCPDMLFELMRMCWQ 300
Query: 269 --PRARPSASELLK------DPFFSELN 288
P+ RPS E++ +P F E++
Sbjct: 301 YNPKMRPSFLEIISSIKEEMEPGFREVS 328
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 77/159 (48%), Gaps = 10/159 (6%)
Query: 74 SEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTY-RKKHRHV-SIKALKK 131
+E ++ L++ ++ V ++++ L +TE G+L Y R + R V L K
Sbjct: 48 AEASVMTQLRHSNLVQLLGVIVEEK-GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 106
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIG 191
+S V E +EYL + +HRDL N+ ++ + K+ D G + +
Sbjct: 107 FSLDVCEAMEYLEGNN--FVHRDLAARNVLVSED-NVAKVSDFGLTKEASSTQDTGKL-- 161
Query: 192 TPEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTM-EIPY 228
++ APE L E+ ++ D++SFG+ L E+ + +PY
Sbjct: 162 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 17 VEVDPSGRFGRYSDLLGSGAVKKVYRA--FDQE-EGIEVAWNQV-RLSHFSEDPVLVNRL 72
V + PS +++++G G VY D + + I A + R++ E V++
Sbjct: 28 VVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE----VSQF 83
Query: 73 HSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRH-VSIKALKK 131
+E +++ + ++ + L + + L + G+LR + + H ++K L
Sbjct: 84 LTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIG 142
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV--GRSHAAHSI 189
+ QV +G+++L + + +HRDL N ++ VK+ D G A + + H+
Sbjct: 143 FGLQVAKGMKFLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEFDSVHNK 199
Query: 190 IGTP---EYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV 245
G ++MA E L + +T D++SFG+ L E++T P + I + G
Sbjct: 200 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 259
Query: 246 KPQALNKVKDPEVKAFIEKCIAQPRARPSASELL 279
+ DP + ++ + RPS SEL+
Sbjct: 260 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 293
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 123/275 (44%), Gaps = 32/275 (11%)
Query: 27 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
++ D++G G +V +A +++G+ + R+ ++ + E+++L L +
Sbjct: 25 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD-FAGELEVLCKLGHHP 83
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR----------------HVSIKALK 130
I+ + + L E GNL + +K R +S + L
Sbjct: 84 NIINL-LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 142
Query: 131 KWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSII 190
++ V G++YL + IHR+L NI + N KI D G + G+ +
Sbjct: 143 HFAADVARGMDYLSQKQ--FIHRNLAARNILVGENY-VAKIADFGLSR--GQEVYVKKTM 197
Query: 191 GT--PEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGVK 246
G +MA E L YT D++S+G+ L E+V++ PY + A++Y+K+ G +
Sbjct: 198 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-TCAELYEKLPQGYR 256
Query: 247 -PQALNKVKDPEVKAFIEKCIAQ-PRARPSASELL 279
+ LN D EV + +C + P RPS +++L
Sbjct: 257 LEKPLN--CDDEVYDLMRQCWREKPYERPSFAQIL 289
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 19/220 (8%)
Query: 75 EVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-------HVSIK 127
E ++ ++ I+ C V L Q + E+ G+L+++ ++ R +++
Sbjct: 90 EALIISKFNHQNIVRCIGVSL--QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 147
Query: 128 ALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFIN--GNIGQVKIGDLGFAAIVGRS-- 183
L ++ + G +YL + IHRD+ N + G KIGD G A + R+
Sbjct: 148 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 205
Query: 184 -HAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTME-IPYSECDSVAKIYKK 240
+ ++M PE + E +T D +SFG+ L E+ ++ +PY S ++ +
Sbjct: 206 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEF 264
Query: 241 VTGGVKPQALNKVKDPEVKAFIEKCIAQPRARPSASELLK 280
VT G + P + + QP RP+ + +L+
Sbjct: 265 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 304
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 17 VEVDPSGRFGRYSDLLGSGAVKKVYRA--FDQE-EGIEVAWNQV-RLSHFSEDPVLVNRL 72
V + PS +++++G G VY D + + I A + R++ E V++
Sbjct: 21 VVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE----VSQF 76
Query: 73 HSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRH-VSIKALKK 131
+E +++ + ++ + L + + L + G+LR + + H ++K L
Sbjct: 77 LTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIG 135
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV--GRSHAAHSI 189
+ QV +G+++L + + +HRDL N ++ VK+ D G A + + H+
Sbjct: 136 FGLQVAKGMKFLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEFDSVHNK 192
Query: 190 IGTP---EYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV 245
G ++MA E L + +T D++SFG+ L E++T P + I + G
Sbjct: 193 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 252
Query: 246 KPQALNKVKDPEVKAFIEKCIAQPRARPSASELL 279
+ DP + ++ + RPS SEL+
Sbjct: 253 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 286
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 17 VEVDPSGRFGRYSDLLGSGAVKKVYRA--FDQE-EGIEVAWNQV-RLSHFSEDPVLVNRL 72
V + PS +++++G G VY D + + I A + R++ E V++
Sbjct: 23 VVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE----VSQF 78
Query: 73 HSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRH-VSIKALKK 131
+E +++ + ++ + L + + L + G+LR + + H ++K L
Sbjct: 79 LTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIG 137
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV--GRSHAAHSI 189
+ QV +G+++L + + +HRDL N ++ VK+ D G A + + H+
Sbjct: 138 FGLQVAKGMKFLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEFDSVHNK 194
Query: 190 IGTP---EYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV 245
G ++MA E L + +T D++SFG+ L E++T P + I + G
Sbjct: 195 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 254
Query: 246 KPQALNKVKDPEVKAFIEKCIAQPRARPSASELL 279
+ DP + ++ + RPS SEL+
Sbjct: 255 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 17 VEVDPSGRFGRYSDLLGSGAVKKVYRA--FDQE-EGIEVAWNQV-RLSHFSEDPVLVNRL 72
V + PS +++++G G VY D + + I A + R++ E V++
Sbjct: 23 VVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE----VSQF 78
Query: 73 HSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRH-VSIKALKK 131
+E +++ + ++ + L + + L + G+LR + + H ++K L
Sbjct: 79 LTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIG 137
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV--GRSHAAHSI 189
+ QV +G+++L + + +HRDL N ++ VK+ D G A + + H+
Sbjct: 138 FGLQVAKGMKFLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEFDSVHNK 194
Query: 190 IGTP---EYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV 245
G ++MA E L + +T D++SFG+ L E++T P + I + G
Sbjct: 195 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 254
Query: 246 KPQALNKVKDPEVKAFIEKCIAQPRARPSASELL 279
+ DP + ++ + RPS SEL+
Sbjct: 255 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 125/283 (44%), Gaps = 35/283 (12%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLH--SEVQLLRTLKNKYIIV 89
LG G+ VY + + +V + +E + R+ +E +++ +++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 90 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRH----------VSIKALKKWSKQVLEG 139
V Q + I E+ T G+L++Y + R S+ + + + ++ +G
Sbjct: 80 LLGVVSQGQPTLV--IMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 140 LEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS---HAAHSIIGTPEYM 196
+ YL+ ++ +HRDL N + + VKIGD G + + + +M
Sbjct: 138 MAYLNANK--FVHRDLAARNCXVAEDF-TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 194
Query: 197 APE-LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGVKPQALNKVK 254
+PE L + +T D++SFG+ L E+ T+ E PY + + + GG+ L+K
Sbjct: 195 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL----LDKPD 250
Query: 255 D-PEVKAFIEKCIAQ--PRARPSASELLK------DPFFSELN 288
+ P++ + + Q P+ RPS E++ +P F E++
Sbjct: 251 NCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVS 293
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 93/213 (43%), Gaps = 30/213 (14%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL------KNK 85
LG G V+ A D VA VR D V E++LL+ + K
Sbjct: 27 LGWGHFSTVWLAKDMVNNTHVAMKIVR-----GDKVYTEAAEDEIKLLQRVNDADNTKED 81
Query: 86 YIIVCYSVWLDDQHNT-------LNFITEVCTSGNLRTYRK-KHRHVSIKALKKWSKQVL 137
+ + + L D N + + EV L +K +HR + + +K+ SKQ+L
Sbjct: 82 SMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLL 141
Query: 138 EGLEYLHTHEPC-IIHRDLNCSNIFIN-----GNIGQVKIGDLGFAAIVGRSHAAHSIIG 191
GL+Y+H C IIH D+ N+ + N+ Q+KI DLG A H +S I
Sbjct: 142 LGLDYMHRR--CGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD-EHYTNS-IQ 197
Query: 192 TPEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVT 223
T EY +PE L + DI+S + E++T
Sbjct: 198 TREYRSPEVLLGAPWGCGADIWSTACLIFELIT 230
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 17 VEVDPSGRFGRYSDLLGSGAVKKVYRA--FDQE-EGIEVAWNQV-RLSHFSEDPVLVNRL 72
V + PS +++++G G VY D + + I A + R++ E V++
Sbjct: 24 VVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE----VSQF 79
Query: 73 HSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRH-VSIKALKK 131
+E +++ + ++ + L + + L + G+LR + + H ++K L
Sbjct: 80 LTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIG 138
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV--GRSHAAHSI 189
+ QV +G+++L + + +HRDL N ++ VK+ D G A + + H+
Sbjct: 139 FGLQVAKGMKFLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEFDSVHNK 195
Query: 190 IGTP---EYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV 245
G ++MA E L + +T D++SFG+ L E++T P + I + G
Sbjct: 196 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 255
Query: 246 KPQALNKVKDPEVKAFIEKCIAQPRARPSASELL 279
+ DP + ++ + RPS SEL+
Sbjct: 256 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 289
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 77/159 (48%), Gaps = 10/159 (6%)
Query: 74 SEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTY-RKKHRHV-SIKALKK 131
+E ++ L++ ++ V ++++ L +TE G+L Y R + R V L K
Sbjct: 235 AEASVMTQLRHSNLVQLLGVIVEEK-GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 293
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIG 191
+S V E +EYL + +HRDL N+ ++ + K+ D G + +
Sbjct: 294 FSLDVCEAMEYLEGNN--FVHRDLAARNVLVSED-NVAKVSDFGLTKEASSTQDTGKL-- 348
Query: 192 TPEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTM-EIPY 228
++ APE L E+ ++ D++SFG+ L E+ + +PY
Sbjct: 349 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 387
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 101/258 (39%), Gaps = 35/258 (13%)
Query: 2 PAANSNMSDRDGEPFV--EVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRL 59
P + S RD FV V+ R +L G VY A D G E A ++
Sbjct: 4 PGSLGGASGRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLS 63
Query: 60 SHFSEDPVLVNRLHSEVQLLRTLKNKYIIV--CYSVWL-----DDQHNTLNFITEVCTSG 112
+ ++ ++ EV ++ L IV C + + D +TE+C G
Sbjct: 64 NEEEKNRAIIQ----EVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELC-KG 118
Query: 113 NLRTYRKKHRH---VSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQV 169
L + KK +S + K Q ++++H +P IIHRDL N+ ++ N G +
Sbjct: 119 QLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLS-NQGTI 177
Query: 170 KIGDLGFAAIVG-----------RSHAAHSII--GTPEYMAPE---LYEE-DYTEMVDIY 212
K+ D G A + R+ I TP Y PE LY E DI+
Sbjct: 178 KLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIW 237
Query: 213 SFGLCLLEMVTMEIPYSE 230
+ G L + + P+ +
Sbjct: 238 ALGCILYLLCFRQHPFED 255
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 19/220 (8%)
Query: 75 EVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-------HVSIK 127
E ++ ++ I+ C V L Q + E+ G+L+++ ++ R +++
Sbjct: 124 EALIISKFNHQNIVRCIGVSL--QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 181
Query: 128 ALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFIN--GNIGQVKIGDLGFAAIVGRS-- 183
L ++ + G +YL + IHRD+ N + G KIGD G A + R+
Sbjct: 182 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGY 239
Query: 184 -HAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTME-IPYSECDSVAKIYKK 240
+ ++M PE + E +T D +SFG+ L E+ ++ +PY S ++ +
Sbjct: 240 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEF 298
Query: 241 VTGGVKPQALNKVKDPEVKAFIEKCIAQPRARPSASELLK 280
VT G + P + + QP RP+ + +L+
Sbjct: 299 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 338
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 19/220 (8%)
Query: 75 EVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-------HVSIK 127
E ++ ++ I+ C V L Q + E+ G+L+++ ++ R +++
Sbjct: 100 EALIISKFNHQNIVRCIGVSL--QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 157
Query: 128 ALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFIN--GNIGQVKIGDLGFAAIVGRS-- 183
L ++ + G +YL + IHRD+ N + G KIGD G A + R+
Sbjct: 158 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 215
Query: 184 -HAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTME-IPYSECDSVAKIYKK 240
+ ++M PE + E +T D +SFG+ L E+ ++ +PY S ++ +
Sbjct: 216 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEF 274
Query: 241 VTGGVKPQALNKVKDPEVKAFIEKCIAQPRARPSASELLK 280
VT G + P + + QP RP+ + +L+
Sbjct: 275 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 314
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 93/213 (43%), Gaps = 30/213 (14%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL------KNK 85
LG G V+ A D VA VR D V E++LL+ + K
Sbjct: 27 LGWGHFSTVWLAKDMVNNTHVAMKIVR-----GDKVYTEAAEDEIKLLQRVNDADNTKED 81
Query: 86 YIIVCYSVWLDDQHNT-------LNFITEVCTSGNLRTYRK-KHRHVSIKALKKWSKQVL 137
+ + + L D N + + EV L +K +HR + + +K+ SKQ+L
Sbjct: 82 SMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLL 141
Query: 138 EGLEYLHTHEPC-IIHRDLNCSNIFIN-----GNIGQVKIGDLGFAAIVGRSHAAHSIIG 191
GL+Y+H C IIH D+ N+ + N+ Q+KI DLG A H +S I
Sbjct: 142 LGLDYMHRR--CGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD-EHYTNS-IQ 197
Query: 192 TPEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVT 223
T EY +PE L + DI+S + E++T
Sbjct: 198 TREYRSPEVLLGAPWGCGADIWSTACLIFELIT 230
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 19/220 (8%)
Query: 75 EVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-------HVSIK 127
E ++ ++ I+ C V L Q + E+ G+L+++ ++ R +++
Sbjct: 110 EALIISKFNHQNIVRCIGVSL--QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 167
Query: 128 ALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFIN--GNIGQVKIGDLGFAAIVGRS-- 183
L ++ + G +YL + IHRD+ N + G KIGD G A + R+
Sbjct: 168 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 225
Query: 184 -HAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTME-IPYSECDSVAKIYKK 240
+ ++M PE + E +T D +SFG+ L E+ ++ +PY S ++ +
Sbjct: 226 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEF 284
Query: 241 VTGGVKPQALNKVKDPEVKAFIEKCIAQPRARPSASELLK 280
VT G + P + + QP RP+ + +L+
Sbjct: 285 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 324
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 101/238 (42%), Gaps = 38/238 (15%)
Query: 5 NSNMSDRDGEPFVEVDPSGRFGRYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHF 62
N+ D D +V+V RY L +G G+ +V +A+D + VA VR
Sbjct: 76 NNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVR---- 131
Query: 63 SEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLN---------FITEVCTSGN 113
+ + E+++L L+ + D+ NT+N F +C +
Sbjct: 132 -NEKRFHRQAAEEIRILEHLRKQ-----------DKDNTMNVIHMLENFTFRNHICMTFE 179
Query: 114 LRTY-------RKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNI 166
L + + K + S+ ++K++ +L+ L+ LH + IIH DL NI +
Sbjct: 180 LLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR--IIHCDLKPENILLKQQ- 236
Query: 167 GQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVT 223
G+ I + F + ++ I + Y APE + Y +D++S G L E++T
Sbjct: 237 GRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLT 294
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 101/240 (42%), Gaps = 38/240 (15%)
Query: 3 AANSNMSDRDGEPFVEVDPSGRFGRYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLS 60
N+ D D +V+V RY L +G G+ +V +A+D + VA VR
Sbjct: 74 GPNNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVR-- 131
Query: 61 HFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLN---------FITEVCTS 111
+ + E+++L L+ + D+ NT+N F +C +
Sbjct: 132 ---NEKRFHRQAAEEIRILEHLRKQ-----------DKDNTMNVIHMLENFTFRNHICMT 177
Query: 112 GNLRTY-------RKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFING 164
L + + K + S+ ++K++ +L+ L+ LH + IIH DL NI +
Sbjct: 178 FELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR--IIHCDLKPENILLKQ 235
Query: 165 NIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVT 223
G+ I + F + ++ I + Y APE + Y +D++S G L E++T
Sbjct: 236 Q-GRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLT 294
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 24/170 (14%)
Query: 72 LHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKH---------- 121
H E +LL L++++I+ Y V ++ + L + E G+L + + H
Sbjct: 62 FHREAELLTNLQHEHIVKFYGVCVEG--DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEG 119
Query: 122 ---RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA 178
++ + ++Q+ G+ YL + +HRDL N + N+ VKIGD G +
Sbjct: 120 NPPTELTQSQMLHIAQQIAAGMVYLASQH--FVHRDLATRNCLVGENL-LVKIGDFGMSR 176
Query: 179 IVGRSH----AAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVT 223
V + H+++ +M PE + +T D++S G+ L E+ T
Sbjct: 177 DVYSTDYYRVGGHTMLPI-RWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 129 LKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS 188
++ + ++L+ L+Y H+ I+HRD+ N+ I+ + ++++ D G A +
Sbjct: 148 IRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 205
Query: 189 IIGTPEYMAPELYE--EDYTEMVDIYSFGLCLLEMVTMEIPY----SECDSVAKIYKKVT 242
+ + + PEL +DY +D++S G M+ + P+ D + KI K +
Sbjct: 206 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 265
Query: 243 GGVKPQALNKVK---DPEVKAFIEKCIAQP 269
LNK + DP+++A + + +P
Sbjct: 266 TDGLNAYLNKYRIELDPQLEALVGRHSRKP 295
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 10/132 (7%)
Query: 104 FITEVCTSGNLRTY-RKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFI 162
ITE +G+L + RK ++ L + + G++YL +HRDL NI +
Sbjct: 107 IITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSA--VHRDLAARNILV 164
Query: 163 NGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTP---EYMAPE-LYEEDYTEMVDIYSFGLC 217
N N+ K+ D G + ++ AA++ G + APE + +T D++S+G+
Sbjct: 165 NSNL-VCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV 223
Query: 218 LLEMVTM-EIPY 228
+ E+++ E PY
Sbjct: 224 MWEVMSYGERPY 235
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 135 QVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPE 194
++L+ L+Y H+ I+HRD+ N+ I+ + ++++ D G A + + +
Sbjct: 133 ELLKALDYCHSQ--GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY 190
Query: 195 YMAPELYE--EDYTEMVDIYSFGLCLLEMVTMEIPY----SECDSVAKIYKKVTGGVKPQ 248
+ PEL +DY +D++S G M+ + P+ D + KI K +
Sbjct: 191 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 250
Query: 249 ALNKVK---DPEVKAFIEKCIAQP 269
LNK + DP+++A + + +P
Sbjct: 251 YLNKYRIELDPQLEALVGRHSRKP 274
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Query: 118 RKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFA 177
R K + + + + ++L L YLH+ +++ DL NI + Q+K+ DLG
Sbjct: 173 RSKGQKLPVAEAIAYLLEILPALSYLHSI--GLVYNDLKPENIMLTEE--QLKLIDLG-- 226
Query: 178 AIVGRSHAAHSIIGTPEYMAPELYEEDYTEMVDIYSFGLCLLEMVTMEIP 227
V R ++ + GTP + APE+ T DIY+ G L + T+++P
Sbjct: 227 -AVSRINSFGYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAAL-TLDLP 274
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 129 LKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS 188
++ + ++L+ L+Y H+ I+HRD+ N+ I+ + ++++ D G A +
Sbjct: 128 IRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 185
Query: 189 IIGTPEYMAPELYE--EDYTEMVDIYSFGLCLLEMVTMEIPY----SECDSVAKIYKKVT 242
+ + + PEL +DY +D++S G M+ + P+ D + KI K +
Sbjct: 186 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 245
Query: 243 GGVKPQALNKVK---DPEVKAFIEKCIAQP 269
LNK + DP+++A + + +P
Sbjct: 246 TDGLNVYLNKYRIELDPQLEALVGRHSRKP 275
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 135 QVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPE 194
++L+ L+Y H+ I+HRD+ N+ I+ + ++++ D G A + + +
Sbjct: 134 ELLKALDYCHSQ--GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY 191
Query: 195 YMAPELYE--EDYTEMVDIYSFGLCLLEMVTMEIPY----SECDSVAKIYKKVTGGVKPQ 248
+ PEL +DY +D++S G M+ + P+ D + KI K +
Sbjct: 192 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 251
Query: 249 ALNKVK---DPEVKAFIEKCIAQP 269
LNK + DP+++A + + +P
Sbjct: 252 YLNKYRIELDPQLEALVGRHSRKP 275
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 129 LKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS 188
++ + ++L+ L+Y H+ I+HRD+ N+ I+ + ++++ D G A +
Sbjct: 129 IRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 186
Query: 189 IIGTPEYMAPELYE--EDYTEMVDIYSFGLCLLEMVTMEIPY----SECDSVAKIYKKVT 242
+ + + PEL +DY +D++S G M+ + P+ D + KI K +
Sbjct: 187 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 246
Query: 243 GGVKPQALNKVK---DPEVKAFIEKCIAQP 269
LNK + DP+++A + + +P
Sbjct: 247 TDGLNVYLNKYRIELDPQLEALVGRHSRKP 276
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 129 LKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS 188
++ + ++L+ L+Y H+ I+HRD+ N+ I+ + ++++ D G A +
Sbjct: 127 IRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 184
Query: 189 IIGTPEYMAPELYE--EDYTEMVDIYSFGLCLLEMVTMEIPY----SECDSVAKIYKKVT 242
+ + + PEL +DY +D++S G M+ + P+ D + KI K +
Sbjct: 185 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 244
Query: 243 GGVKPQALNKVK---DPEVKAFIEKCIAQP 269
LNK + DP+++A + + +P
Sbjct: 245 TDGLNVYLNKYRIELDPQLEALVGRHSRKP 274
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 129 LKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS 188
++ + ++L+ L+Y H+ I+HRD+ N+ I+ + ++++ D G A +
Sbjct: 127 IRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 184
Query: 189 IIGTPEYMAPELYE--EDYTEMVDIYSFGLCLLEMVTMEIPY----SECDSVAKIYKKVT 242
+ + + PEL +DY +D++S G M+ + P+ D + KI K +
Sbjct: 185 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 244
Query: 243 GGVKPQALNKVK---DPEVKAFIEKCIAQP 269
LNK + DP+++A + + +P
Sbjct: 245 TDGLNVYLNKYRIELDPQLEALVGRHSRKP 274
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 129 LKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS 188
++ + ++L+ L+Y H+ I+HRD+ N+ I+ + ++++ D G A +
Sbjct: 127 IRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 184
Query: 189 IIGTPEYMAPELYE--EDYTEMVDIYSFGLCLLEMVTMEIPY----SECDSVAKIYKKVT 242
+ + + PEL +DY +D++S G M+ + P+ D + KI K +
Sbjct: 185 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 244
Query: 243 GGVKPQALNKVK---DPEVKAFIEKCIAQP 269
LNK + DP+++A + + +P
Sbjct: 245 TDGLNVYLNKYRIELDPQLEALVGRHSRKP 274
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 129 LKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS 188
++ + ++L+ L+Y H+ I+HRD+ N+ I+ + ++++ D G A +
Sbjct: 127 IRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 184
Query: 189 IIGTPEYMAPELYE--EDYTEMVDIYSFGLCLLEMVTMEIPY----SECDSVAKIYKKVT 242
+ + + PEL +DY +D++S G M+ + P+ D + KI K +
Sbjct: 185 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 244
Query: 243 GGVKPQALNKVK---DPEVKAFIEKCIAQP 269
LNK + DP+++A + + +P
Sbjct: 245 TDGLNVYLNKYRIELDPQLEALVGRHSRKP 274
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 129 LKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS 188
++ + ++L+ L+Y H+ I+HRD+ N+ I+ + ++++ D G A +
Sbjct: 127 IRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 184
Query: 189 IIGTPEYMAPELYE--EDYTEMVDIYSFGLCLLEMVTMEIPY----SECDSVAKIYKKVT 242
+ + + PEL +DY +D++S G M+ + P+ D + KI K +
Sbjct: 185 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 244
Query: 243 GGVKPQALNKVK---DPEVKAFIEKCIAQP 269
LNK + DP+++A + + +P
Sbjct: 245 TDGLNVYLNKYRIELDPQLEALVGRHSRKP 274
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 66/132 (50%), Gaps = 10/132 (7%)
Query: 104 FITEVCTSGNLRTY-RKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFI 162
ITE +G+L + RK ++ L + + G++YL + +HRDL NI +
Sbjct: 92 IITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS--DMSYVHRDLAARNILV 149
Query: 163 NGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTP---EYMAPE-LYEEDYTEMVDIYSFGLC 217
N N+ K+ D G + ++ AA++ G + APE + +T D++S+G+
Sbjct: 150 NSNL-VCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV 208
Query: 218 LLEMVTM-EIPY 228
+ E+++ E PY
Sbjct: 209 MWEVMSYGERPY 220
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 66/132 (50%), Gaps = 10/132 (7%)
Query: 104 FITEVCTSGNLRTY-RKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFI 162
ITE +G+L + RK ++ L + + G++YL + +HRDL NI +
Sbjct: 86 IITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS--DMSYVHRDLAARNILV 143
Query: 163 NGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTP---EYMAPE-LYEEDYTEMVDIYSFGLC 217
N N+ K+ D G + ++ AA++ G + APE + +T D++S+G+
Sbjct: 144 NSNL-VCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV 202
Query: 218 LLEMVTM-EIPY 228
+ E+++ E PY
Sbjct: 203 MWEVMSYGERPY 214
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 84/167 (50%), Gaps = 21/167 (12%)
Query: 123 HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV-- 180
++ ++ L ++ + G+EYL + IHRDL N + ++ V + D G + +
Sbjct: 133 NLPLQTLVRFMVDIACGMEYLSSRN--FIHRDLAARNCMLAEDM-TVCVADFGLSRKIYS 189
Query: 181 GRSHAAHSIIGTP-EYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKI 237
G + P +++A E L + YT D+++FG+ + E++T + PY+ ++ A+I
Sbjct: 190 GDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN-AEI 248
Query: 238 YKKVTGGVKPQALNKVKDP-----EVKAFIEKCI-AQPRARPSASEL 278
Y + GG N++K P EV + +C A P+ RPS + L
Sbjct: 249 YNYLIGG------NRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCL 289
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 104 FITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFI 162
+ E +G L + +KH ++ L + + G+ YL + +HRDL NI +
Sbjct: 121 IVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLA--DMGYVHRDLAARNILV 178
Query: 163 NGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTP---EYMAPELYE-EDYTEMVDIYSFGLC 217
N N+ K+ D G + ++ A ++ G + APE + +T D++S+G+
Sbjct: 179 NSNL-VCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIV 237
Query: 218 LLEMVTM-EIPY 228
+ E+++ E PY
Sbjct: 238 MWEVMSYGERPY 249
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNI-FINGNIGQVKIGDLGFAAIVGRSHAAHSII 190
+ QV E L++LH+H I H D+ NI + +KI + G A + +
Sbjct: 107 YVHQVCEALQFLHSHN--IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLF 164
Query: 191 GTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQA 249
PEY APE+++ D + D++S G + +++ P+ ++ +I + +
Sbjct: 165 TAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFL-AETNQQIIENIMNAEYTFD 223
Query: 250 LNKVKDPEVKA--FIEKCIAQPR-ARPSASELLKDPFFSE 286
K+ ++A F+++ + + R +R +ASE L+ P+ +
Sbjct: 224 EEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ 263
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 21/167 (12%)
Query: 134 KQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNI--GQVKIGDLGFAAIVGRSHAAHSIIG 191
K + E ++YLH+ I HRD+ N+ +K+ D GFA ++ +
Sbjct: 123 KSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY 180
Query: 192 TPEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQA- 249
TP Y+APE L E Y + D++S G+ + ++ P+ +A ++ G+K +
Sbjct: 181 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-----ISPGMKTRIR 235
Query: 250 LNKVKDP---------EVKAFIEKCI-AQPRARPSASELLKDPFFSE 286
+ + + P EVK I + +P R + +E + P+ +
Sbjct: 236 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 282
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 21/167 (12%)
Query: 134 KQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNI--GQVKIGDLGFAAIVGRSHAAHSIIG 191
K + E ++YLH+ I HRD+ N+ +K+ D GFA ++ +
Sbjct: 124 KSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY 181
Query: 192 TPEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQA- 249
TP Y+APE L E Y + D++S G+ + ++ P+ +A ++ G+K +
Sbjct: 182 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-----ISPGMKTRIR 236
Query: 250 LNKVKDP---------EVKAFIEKCI-AQPRARPSASELLKDPFFSE 286
+ + + P EVK I + +P R + +E + P+ +
Sbjct: 237 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 283
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 21/167 (12%)
Query: 134 KQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNI--GQVKIGDLGFAAIVGRSHAAHSIIG 191
K + E ++YLH+ I HRD+ N+ +K+ D GFA ++ +
Sbjct: 122 KSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY 179
Query: 192 TPEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQA- 249
TP Y+APE L E Y + D++S G+ + ++ P+ +A ++ G+K +
Sbjct: 180 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-----ISPGMKTRIR 234
Query: 250 LNKVKDP---------EVKAFIEKCI-AQPRARPSASELLKDPFFSE 286
+ + + P EVK I + +P R + +E + P+ +
Sbjct: 235 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 281
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 21/167 (12%)
Query: 134 KQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQ--VKIGDLGFAAIVGRSHAAHSIIG 191
K + E ++YLH+ I HRD+ N+ +K+ D GFA ++ +
Sbjct: 130 KSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY 187
Query: 192 TPEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQA- 249
TP Y+APE L E Y + D++S G+ + ++ P+ +A ++ G+K +
Sbjct: 188 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-----ISPGMKTRIR 242
Query: 250 LNKVKDP---------EVKAFIEKCI-AQPRARPSASELLKDPFFSE 286
+ + + P EVK I + +P R + +E + P+ +
Sbjct: 243 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 289
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 21/167 (12%)
Query: 134 KQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNI--GQVKIGDLGFAAIVGRSHAAHSIIG 191
K + E ++YLH+ I HRD+ N+ +K+ D GFA ++ +
Sbjct: 168 KSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY 225
Query: 192 TPEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQA- 249
TP Y+APE L E Y + D++S G+ + ++ P+ +A ++ G+K +
Sbjct: 226 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-----ISPGMKTRIR 280
Query: 250 LNKVKDP---------EVKAFIEKCI-AQPRARPSASELLKDPFFSE 286
+ + + P EVK I + +P R + +E + P+ +
Sbjct: 281 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 327
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 21/167 (12%)
Query: 134 KQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQ--VKIGDLGFAAIVGRSHAAHSIIG 191
K + E ++YLH+ I HRD+ N+ +K+ D GFA ++ +
Sbjct: 129 KSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY 186
Query: 192 TPEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQA- 249
TP Y+APE L E Y + D++S G+ + ++ P+ +A ++ G+K +
Sbjct: 187 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-----ISPGMKTRIR 241
Query: 250 LNKVKDP---------EVKAFIEKCI-AQPRARPSASELLKDPFFSE 286
+ + + P EVK I + +P R + +E + P+ +
Sbjct: 242 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 288
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 21/167 (12%)
Query: 134 KQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNI--GQVKIGDLGFAAIVGRSHAAHSIIG 191
K + E ++YLH+ I HRD+ N+ +K+ D GFA ++ +
Sbjct: 124 KSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY 181
Query: 192 TPEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQA- 249
TP Y+APE L E Y + D++S G+ + ++ P+ +A ++ G+K +
Sbjct: 182 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-----ISPGMKTRIR 236
Query: 250 LNKVKDP---------EVKAFIEKCI-AQPRARPSASELLKDPFFSE 286
+ + + P EVK I + +P R + +E + P+ +
Sbjct: 237 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 283
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 21/167 (12%)
Query: 134 KQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQ--VKIGDLGFAAIVGRSHAAHSIIG 191
K + E ++YLH+ I HRD+ N+ +K+ D GFA ++ +
Sbjct: 128 KSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY 185
Query: 192 TPEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQA- 249
TP Y+APE L E Y + D++S G+ + ++ P+ +A ++ G+K +
Sbjct: 186 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-----ISPGMKTRIR 240
Query: 250 LNKVKDP---------EVKAFIEKCI-AQPRARPSASELLKDPFFSE 286
+ + + P EVK I + +P R + +E + P+ +
Sbjct: 241 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 287
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 21/167 (12%)
Query: 134 KQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNI--GQVKIGDLGFAAIVGRSHAAHSIIG 191
K + E ++YLH+ I HRD+ N+ +K+ D GFA ++ +
Sbjct: 174 KSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY 231
Query: 192 TPEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQA- 249
TP Y+APE L E Y + D++S G+ + ++ P+ +A ++ G+K +
Sbjct: 232 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-----ISPGMKTRIR 286
Query: 250 LNKVKDP---------EVKAFIEKCI-AQPRARPSASELLKDPFFSE 286
+ + + P EVK I + +P R + +E + P+ +
Sbjct: 287 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 333
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 21/167 (12%)
Query: 134 KQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNI--GQVKIGDLGFAAIVGRSHAAHSIIG 191
K + E ++YLH+ I HRD+ N+ +K+ D GFA ++ +
Sbjct: 138 KSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY 195
Query: 192 TPEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQA- 249
TP Y+APE L E Y + D++S G+ + ++ P+ +A ++ G+K +
Sbjct: 196 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-----ISPGMKTRIR 250
Query: 250 LNKVKDP---------EVKAFIEKCI-AQPRARPSASELLKDPFFSE 286
+ + + P EVK I + +P R + +E + P+ +
Sbjct: 251 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 297
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 29/177 (16%)
Query: 134 KQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIG------------QVKIGDLGFAAIVG 181
+Q+ G+ +LH+ + IIHRDL NI ++ + ++ I D G +
Sbjct: 140 RQIASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 197
Query: 182 RSHAA-----HSIIGTPEYMAPELYEED----YTEMVDIYSFGLCLLEMVTMEIPYSECD 232
++ GT + APEL EE T +DI+S G C+ + + + D
Sbjct: 198 SGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMG-CVFYYILSKGKHPFGD 256
Query: 233 SVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIAQ-----PRARPSASELLKDPFF 284
++ + G + + D + A I+Q P RP+A ++L+ P F
Sbjct: 257 KYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 29/177 (16%)
Query: 134 KQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIG------------QVKIGDLGFAAIVG 181
+Q+ G+ +LH+ + IIHRDL NI ++ + ++ I D G +
Sbjct: 140 RQIASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 197
Query: 182 RSHAA-----HSIIGTPEYMAPELYEED----YTEMVDIYSFGLCLLEMVTMEIPYSECD 232
++ GT + APEL EE T +DI+S G C+ + + + D
Sbjct: 198 SGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMG-CVFYYILSKGKHPFGD 256
Query: 233 SVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIAQ-----PRARPSASELLKDPFF 284
++ + G + + D + A I+Q P RP+A ++L+ P F
Sbjct: 257 KYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 116/277 (41%), Gaps = 45/277 (16%)
Query: 32 LGSGAVKKVYRA-----FDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
LG GA KV+ A +++ + VA ++ + S E +LL L++++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR----QDFQREAELLTMLQHQH 104
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRH---------------VSIKALKK 131
I+ + V + + L + E G+L + + H + + L
Sbjct: 105 IVRFFGVCTEGR--PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 162
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS---HAAHS 188
+ QV G+ YL +HRDL N + + VKIGD G + + +
Sbjct: 163 VASQVAAGMVYLAGLH--FVHRDLATRNCLVGQGL-VVKIGDFGMSRDIYSTDYYRVGGR 219
Query: 189 IIGTPEYMAPE--LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGV 245
+ +M PE LY + TE D++SFG+ L E+ T + P+ + + I +T G
Sbjct: 220 TMLPIRWMPPESILYRKFTTE-SDVWSFGVVLWEIFTYGKQPWYQLSNTEAI-DCITQGR 277
Query: 246 ---KPQALNKVKDPEVKAFIEKCIA-QPRARPSASEL 278
+P+A PEV A + C +P+ R S ++
Sbjct: 278 ELERPRAC----PPEVYAIMRGCWQREPQQRHSIKDV 310
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 33/181 (18%)
Query: 134 KQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIG------------QVKIGDLGFAAIVG 181
+Q+ G+ +LH+ + IIHRDL NI ++ + ++ I D G +
Sbjct: 122 RQIASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 179
Query: 182 RSHAA-----HSIIGTPEYMAPELYEED--------YTEMVDIYSFGLCLLEMVTMEIPY 228
++ ++ GT + APEL EE T +DI+S G C+ + + +
Sbjct: 180 SGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMG-CVFYYILSKGKH 238
Query: 229 SECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIAQ-----PRARPSASELLKDPF 283
D ++ + G + + D + A I+Q P RP+A ++L+ P
Sbjct: 239 PFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPL 298
Query: 284 F 284
F
Sbjct: 299 F 299
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 116/277 (41%), Gaps = 45/277 (16%)
Query: 32 LGSGAVKKVYRA-----FDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
LG GA KV+ A +++ + VA ++ + S E +LL L++++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR----QDFQREAELLTMLQHQH 75
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRH---------------VSIKALKK 131
I+ + V + + L + E G+L + + H + + L
Sbjct: 76 IVRFFGVCTEGR--PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 133
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS---HAAHS 188
+ QV G+ YL +HRDL N + + VKIGD G + + +
Sbjct: 134 VASQVAAGMVYLAGLH--FVHRDLATRNCLVGQGL-VVKIGDFGMSRDIYSTDYYRVGGR 190
Query: 189 IIGTPEYMAPE--LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGV 245
+ +M PE LY + TE D++SFG+ L E+ T + P+ + + I +T G
Sbjct: 191 TMLPIRWMPPESILYRKFTTES-DVWSFGVVLWEIFTYGKQPWYQLSNTEAI-DCITQGR 248
Query: 246 ---KPQALNKVKDPEVKAFIEKCIA-QPRARPSASEL 278
+P+A PEV A + C +P+ R S ++
Sbjct: 249 ELERPRAC----PPEVYAIMRGCWQREPQQRHSIKDV 281
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN-KYIIVC 90
LG G +V+ A + +V ++ PV N++ E+++L L+ II
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKILK-------PVKKNKIKREIKILENLRGGPNIITL 97
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCI 150
+ D T + E + + +++ ++ ++ ++ + ++L+ L+Y H+ I
Sbjct: 98 ADIVKDPVSRTPALVFEHVNNTD---FKQLYQTLTDYDIRFYMYEILKALDYCHS--MGI 152
Query: 151 IHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELY--EEDYTEM 208
+HRD+ N+ I+ ++++ D G A + + + + PEL + Y
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 209 VDIYSFGLCLLEMVTMEIPY 228
+D++S G L M+ + P+
Sbjct: 213 LDMWSLGCMLASMIFRKEPF 232
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 90/209 (43%), Gaps = 21/209 (10%)
Query: 31 LLGSGAVKKVYRA-FDQEEG--IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYI 87
+LG G V QE+G ++VA ++L + S+ + SE ++ + +
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREI--EEFLSEAACMKDFSHPNV 98
Query: 88 IVCYSVWLDDQHNTL---NFITEVCTSGNLRTYRKKHR------HVSIKALKKWSKQVLE 138
I V ++ + I G+L TY R H+ ++ L K+ +
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIAL 158
Query: 139 GLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV--GRSHAAHSIIGTP-EY 195
G+EYL +HRDL N + ++ V + D G + + G + I P ++
Sbjct: 159 GMEYLSNRN--FLHRDLAARNCMLRDDM-TVCVADFGLSKKIYSGDYYRQGRIAKMPVKW 215
Query: 196 MAPE-LYEEDYTEMVDIYSFGLCLLEMVT 223
+A E L + YT D+++FG+ + E+ T
Sbjct: 216 IAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 116/277 (41%), Gaps = 45/277 (16%)
Query: 32 LGSGAVKKVYRA-----FDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 86
LG GA KV+ A +++ + VA ++ + S E +LL L++++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR----QDFQREAELLTMLQHQH 81
Query: 87 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRH---------------VSIKALKK 131
I+ + V + + L + E G+L + + H + + L
Sbjct: 82 IVRFFGVCTEGR--PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 139
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS---HAAHS 188
+ QV G+ YL +HRDL N + + VKIGD G + + +
Sbjct: 140 VASQVAAGMVYLAGLH--FVHRDLATRNCLVGQGL-VVKIGDFGMSRDIYSTDYYRVGGR 196
Query: 189 IIGTPEYMAPE--LYEEDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGV 245
+ +M PE LY + TE D++SFG+ L E+ T + P+ + + I +T G
Sbjct: 197 TMLPIRWMPPESILYRKFTTE-SDVWSFGVVLWEIFTYGKQPWYQLSNTEAI-DCITQGR 254
Query: 246 ---KPQALNKVKDPEVKAFIEKCIA-QPRARPSASEL 278
+P+A PEV A + C +P+ R S ++
Sbjct: 255 ELERPRAC----PPEVYAIMRGCWQREPQQRHSIKDV 287
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 59/141 (41%), Gaps = 18/141 (12%)
Query: 104 FITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFIN 163
+ E G++ ++ K RH + + V L++LH I HRDL NI
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKG--IAHRDLKPENILCE 145
Query: 164 --GNIGQVKIGDLGFAAIVGRSHAAHSI--------IGTPEYMAPELYE------EDYTE 207
+ VKI D G + + + I G+ EYMAPE+ E Y +
Sbjct: 146 HPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDK 205
Query: 208 MVDIYSFGLCLLEMVTMEIPY 228
D++S G+ L +++ P+
Sbjct: 206 RCDLWSLGVILYILLSGYPPF 226
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 12/133 (9%)
Query: 105 ITEVCTSGNLRTY-RKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFIN 163
ITE +G+L ++ R+ ++ L + + G++YL +HRDL NI +N
Sbjct: 112 ITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN--YVHRDLAARNILVN 169
Query: 164 GNIGQVKIGDLGFAAIV---GRSHAAHSIIGTP---EYMAPELYE-EDYTEMVDIYSFGL 216
N+ K+ D G + + S +G + APE + +T D++S+G+
Sbjct: 170 SNL-VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGI 228
Query: 217 CLLEMVTM-EIPY 228
+ E+++ E PY
Sbjct: 229 VMWEVMSYGERPY 241
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 74/181 (40%), Gaps = 33/181 (18%)
Query: 134 KQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIG------------QVKIGDLGFAAIVG 181
+Q+ G+ +LH+ + IIHRDL NI ++ + ++ I D G +
Sbjct: 122 RQIASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 179
Query: 182 RSHAA-----HSIIGTPEYMAPELYEED--------YTEMVDIYSFGLCLLEMVTMEIPY 228
++ GT + APEL EE T +DI+S G C+ + + +
Sbjct: 180 SGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMG-CVFYYILSKGKH 238
Query: 229 SECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIAQ-----PRARPSASELLKDPF 283
D ++ + G + + D + A I+Q P RP+A ++L+ P
Sbjct: 239 PFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPL 298
Query: 284 F 284
F
Sbjct: 299 F 299
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 18/169 (10%)
Query: 77 QLLRTLKNKYIIVCYSVWLDDQHNTLN-----FITEVCTSGNLRTYRKKHRHVSIKALKK 131
+ +RT K KY+ V W H+ I + S + Y + S K + +
Sbjct: 98 KWIRTRKLKYLGVP-KYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQ 156
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFIN-GNIGQVKIGDLGFA-----AIVGRSHA 185
S ++L+ LEY+H HE +H D+ SN+ +N N QV + D G A V +++A
Sbjct: 157 LSLRILDILEYIHEHE--YVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYA 214
Query: 186 A---HSIIGTPEYMAPELYEEDY-TEMVDIYSFGLCLLEMVTMEIPYSE 230
A GT E+ + + + + D+ G C+++ +T +P+ +
Sbjct: 215 ADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWED 263
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 113/278 (40%), Gaps = 50/278 (17%)
Query: 32 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK-NKYIIVC 90
LG GA V+++ D+ G VA ++ F ++ R E+ +L L ++ I+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKI-FDAF-QNSTDAQRTFREIMILTELSGHENIVNL 74
Query: 91 YSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKA--LKKWSKQ-----VLEGLEYL 143
+V D + + + Y + H I+A L+ KQ +++ ++YL
Sbjct: 75 LNVLRADNDRDVYLVFD---------YMETDLHAVIRANILEPVHKQYVVYQLIKVIKYL 125
Query: 144 HTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFA-AIVGRSHAAHSI------------- 189
H+ ++HRD+ SNI +N VK+ D G + + V ++I
Sbjct: 126 HS--GGLLHRDMKPSNILLNAEC-HVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDD 182
Query: 190 --------IGTPEYMAPE--LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYK 239
+ T Y APE L YT+ +D++S G C+L + P S +
Sbjct: 183 DQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLG-CILGEILCGKPIFPGSSTMNQLE 241
Query: 240 KVTGGV---KPQALNKVKDPEVKAFIEKCIAQPRARPS 274
++ G + + + ++ P K IE + R S
Sbjct: 242 RIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQS 279
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 134 KQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQ--VKIGDLGFAAIVGRSHAAHSIIG 191
K + E ++YLH+ I HRD+ N+ +K+ D GFA ++ +
Sbjct: 168 KSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY 225
Query: 192 TPEYMAPE-LYEEDYTEMVDIYSFGL 216
TP Y+APE L E Y + D +S G+
Sbjct: 226 TPYYVAPEVLGPEKYDKSCDXWSLGV 251
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 104 FITEVCTSGNLRTY-RKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFI 162
+TE +G L ++ R ++ L + + G+ YL E +HRDL NI +
Sbjct: 94 ILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLA--EMSYVHRDLAARNILV 151
Query: 163 NGNIGQVKIGDLGFAAIVGRSHA---AHSIIGTP---EYMAPE-LYEEDYTEMVDIYSFG 215
N N+ K+ D G + + + + S +G + APE + +T D +S+G
Sbjct: 152 NSNL-VCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYG 210
Query: 216 LCLLEMVTM-EIPY 228
+ + E+++ E PY
Sbjct: 211 IVMWEVMSFGERPY 224
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 12/133 (9%)
Query: 105 ITEVCTSGNLRTY-RKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFIN 163
+TE +G L ++ R ++ L + + G+ YL E +HRDL NI +N
Sbjct: 93 LTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLA--EMSYVHRDLAARNILVN 150
Query: 164 GNIGQVKIGDLGFAAIVGRSHAAHSIIGT------PEYMAPE-LYEEDYTEMVDIYSFGL 216
N+ K+ D G + + + + + + + APE + +T D +S+G+
Sbjct: 151 SNL-VCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGI 209
Query: 217 CLLEMVTM-EIPY 228
+ E+++ E PY
Sbjct: 210 VMWEVMSFGERPY 222
>pdb|2JII|A Chain A, Structure Of Vaccinia Related Kinase 3
pdb|2JII|B Chain B, Structure Of Vaccinia Related Kinase 3
Length = 352
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 65/123 (52%), Gaps = 17/123 (13%)
Query: 122 RHV-SIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFING-NIGQVKIGDLGFA-- 177
+HV S +++ + + ++L+ LE+LH +E +H ++ NIF++ + QV + GFA
Sbjct: 153 KHVLSERSVLQVACRLLDALEFLHENE--YVHGNVTAENIFVDPEDQSQVTLAGYGFAFR 210
Query: 178 --------AIVGRSHAAHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPY 228
A V S + H G E+++ +L++ + D+ S G C+L+ + +P+
Sbjct: 211 YCPSGKHVAYVEGSRSPHE--GDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPW 268
Query: 229 SEC 231
+ C
Sbjct: 269 TNC 271
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 18/141 (12%)
Query: 104 FITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFIN 163
+ E G++ ++ K RH + + V L++LH I HRDL NI
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKG--IAHRDLKPENILCE 145
Query: 164 --GNIGQVKIGDLGFAAIVGRSHAAHSI--------IGTPEYMAPELYE------EDYTE 207
+ VKI D + + + I G+ EYMAPE+ E Y +
Sbjct: 146 HPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDK 205
Query: 208 MVDIYSFGLCLLEMVTMEIPY 228
D++S G+ L +++ P+
Sbjct: 206 RCDLWSLGVILYILLSGYPPF 226
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 135 QVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPE 194
++L+ L+Y H+ I+HRD+ N+ I+ ++++ D G A + + + +
Sbjct: 140 ELLKALDYCHS--KGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRY 197
Query: 195 YMAPELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY 228
+ PEL + Y +D++S G L M+ P+
Sbjct: 198 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPF 233
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 104 FITEVCTSGNLRTY-RKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFI 162
ITE +G+L ++ R+ ++ L + + G++YL +HR L NI +
Sbjct: 85 IITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN--YVHRALAARNILV 142
Query: 163 NGNIGQVKIGDLGFAAIV---GRSHAAHSIIGTP---EYMAPELYE-EDYTEMVDIYSFG 215
N N+ K+ D G + + S +G + APE + +T D++S+G
Sbjct: 143 NSNL-VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYG 201
Query: 216 LCLLEMVTM-EIPY 228
+ + E+++ E PY
Sbjct: 202 IVMWEVMSYGERPY 215
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 135 QVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPE 194
++L+ L+Y H+ I+HRD+ N+ I+ ++++ D G A + + + +
Sbjct: 145 ELLKALDYCHS--KGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRY 202
Query: 195 YMAPELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY 228
+ PEL + Y +D++S G L M+ P+
Sbjct: 203 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPF 238
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 129 LKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS 188
++ + ++L+ L+Y H+ I+HRD+ N+ I+ ++++ D G A +
Sbjct: 133 IRFYMYEILKALDYCHS--MGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNV 190
Query: 189 IIGTPEYMAPELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY 228
+ + + PEL + Y +D++S G L M+ + P+
Sbjct: 191 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 129 LKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS 188
++ + ++L+ L+Y H+ I+HRD+ N+ I+ ++++ D G A +
Sbjct: 133 IRFYMYEILKALDYCHSM--GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 190
Query: 189 IIGTPEYMAPELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY 228
+ + + PEL + Y +D++S G L M+ + P+
Sbjct: 191 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 129 LKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS 188
++ + ++L+ L+Y H+ I+HRD+ N+ I+ ++++ D G A +
Sbjct: 133 IRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 190
Query: 189 IIGTPEYMAPELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY 228
+ + + PEL + Y +D++S G L M+ + P+
Sbjct: 191 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 129 LKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS 188
++ + ++L+ L+Y H+ I+HRD+ N+ I+ ++++ D G A +
Sbjct: 132 IRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 189
Query: 189 IIGTPEYMAPELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY 228
+ + + PEL + Y +D++S G L M+ + P+
Sbjct: 190 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 231
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 129 LKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS 188
++ + ++L+ L+Y H+ I+HRD+ N+ I+ ++++ D G A +
Sbjct: 133 IRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 190
Query: 189 IIGTPEYMAPELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY 228
+ + + PEL + Y +D++S G L M+ + P+
Sbjct: 191 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 129 LKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS 188
++ + ++L+ L+Y H+ I+HRD+ N+ I+ ++++ D G A +
Sbjct: 133 IRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 190
Query: 189 IIGTPEYMAPELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY 228
+ + + PEL + Y +D++S G L M+ + P+
Sbjct: 191 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 129 LKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS 188
++ + ++L+ L+Y H+ I+HRD+ N+ I+ ++++ D G A +
Sbjct: 133 IRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 190
Query: 189 IIGTPEYMAPELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY 228
+ + + PEL + Y +D++S G L M+ + P+
Sbjct: 191 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 129 LKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS 188
++ + ++L+ L+Y H+ I+HRD+ N+ I+ ++++ D G A +
Sbjct: 131 IRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 188
Query: 189 IIGTPEYMAPELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY 228
+ + + PEL + Y +D++S G L M+ + P+
Sbjct: 189 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 230
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 129 LKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS 188
++ + ++L+ L+Y H+ I+HRD+ N+ I+ ++++ D G A +
Sbjct: 132 IRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 189
Query: 189 IIGTPEYMAPELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY 228
+ + + PEL + Y +D++S G L M+ + P+
Sbjct: 190 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 231
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 129 LKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS 188
++ + ++L+ L+Y H+ I+HRD+ N+ I+ ++++ D G A +
Sbjct: 133 IRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 190
Query: 189 IIGTPEYMAPELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY 228
+ + + PEL + Y +D++S G L M+ + P+
Sbjct: 191 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 129 LKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS 188
++ + ++L+ L+Y H+ I+HRD+ N+ I+ ++++ D G A +
Sbjct: 133 IRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 190
Query: 189 IIGTPEYMAPELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY 228
+ + + PEL + Y +D++S G L M+ + P+
Sbjct: 191 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 129 LKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS 188
++ + ++L+ L+Y H+ I+HRD+ N+ I+ ++++ D G A +
Sbjct: 133 IRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 190
Query: 189 IIGTPEYMAPELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY 228
+ + + PEL + Y +D++S G L M+ + P+
Sbjct: 191 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 129 LKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS 188
++ + ++L+ L+Y H+ I+HRD+ N+ I+ ++++ D G A +
Sbjct: 133 IRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 190
Query: 189 IIGTPEYMAPELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY 228
+ + + PEL + Y +D++S G L M+ + P+
Sbjct: 191 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 129 LKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS 188
++ + ++L+ L+Y H+ I+HRD+ N+ I+ ++++ D G A +
Sbjct: 138 IRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 195
Query: 189 IIGTPEYMAPELY--EEDYTEMVDIYSFGLCLLEMVTMEIPY 228
+ + + PEL + Y +D++S G L M+ + P+
Sbjct: 196 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 237
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 77 QLLRTLKNKYIIVCYSVWLDDQHNTLN-----FITEVCTSGNLRTYRKKHRHVSIKALKK 131
+ +RT K KY+ V W H+ I + S + Y + S K + +
Sbjct: 98 KWIRTRKLKYLGVP-KYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQ 156
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFIN-GNIGQVKIGDLGFA 177
S ++L+ LEY+H HE +H D+ SN+ +N N QV + D G A
Sbjct: 157 LSLRILDILEYIHEHE--YVHGDIKASNLLLNYKNPDQVYLVDYGLA 201
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 77 QLLRTLKNKYIIVCYSVWLDDQHNTLN-----FITEVCTSGNLRTYRKKHRHVSIKALKK 131
+ +RT K KY+ V W H+ I + S + Y + S K + +
Sbjct: 98 KWIRTRKLKYLGVP-KYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQ 156
Query: 132 WSKQVLEGLEYLHTHEPCIIHRDLNCSNIFIN-GNIGQVKIGDLGFA 177
S ++L+ LEY+H HE +H D+ SN+ +N N QV + D G A
Sbjct: 157 LSLRILDILEYIHEHE--YVHGDIKASNLLLNYKNPDQVYLVDYGLA 201
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 29/158 (18%)
Query: 26 GRYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLS-HFSEDPVLVNRLHSEVQLLRTL 82
GRY + LG G V+ ++D + VA V+ + H++E + E++LL+++
Sbjct: 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETAL------DEIRLLKSV 90
Query: 83 KN-------KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTY-------RKKHRHVSIKA 128
+N + ++V LDD + T +C + + + ++ + +
Sbjct: 91 RNSDPNDPNREMVVQL---LDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPC 147
Query: 129 LKKWSKQVLEGLEYLHTHEPC-IIHRDLNCSNIFINGN 165
+KK +QVL+GL+YLHT C IIH D+ NI ++ N
Sbjct: 148 VKKIIQQVLQGLDYLHTK--CRIIHTDIKPENILLSVN 183
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 29/158 (18%)
Query: 26 GRYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLS-HFSEDPVLVNRLHSEVQLLRTL 82
GRY + LG G V+ ++D + VA V+ + H++E + E++LL+++
Sbjct: 21 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETAL------DEIRLLKSV 74
Query: 83 KN-------KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTY-------RKKHRHVSIKA 128
+N + ++V LDD + T +C + + + ++ + +
Sbjct: 75 RNSDPNDPNREMVVQL---LDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPC 131
Query: 129 LKKWSKQVLEGLEYLHTHEPC-IIHRDLNCSNIFINGN 165
+KK +QVL+GL+YLHT C IIH D+ NI ++ N
Sbjct: 132 VKKIIQQVLQGLDYLHTK--CRIIHTDIKPENILLSVN 167
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 35.0 bits (79), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 51/120 (42%), Gaps = 25/120 (20%)
Query: 136 VLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFA------------AIVGRS 183
+ GLE +H HRDL +NI + G+ GQ + DLG A+ +
Sbjct: 143 ICRGLEAIHA--KGYAHRDLKPTNILL-GDEGQPVLMDLGSMNQACIHVEGSRQALTLQD 199
Query: 184 HAAHSIIGTPEYMAPELYEED----YTEMVDIYSFGLCLLEMVTMEIPY----SECDSVA 235
AA T Y APEL+ E D++S G L M+ E PY + DSVA
Sbjct: 200 WAAQRC--TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVA 257
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 76/156 (48%), Gaps = 31/156 (19%)
Query: 26 GRYSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLS-HFSEDPVLVNRLHSEVQLLRTL 82
GRY + LG G V+ +D + VA V+ + H++E + E++LL+ +
Sbjct: 31 GRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETAL------DEIKLLKCV 84
Query: 83 K-------NKYIIVCYSVWLDD-QHNTLNFITEVCTSGNLRTY-------RKKHRHVSIK 127
+ NK ++V +DD + + +N I VC + + + ++ + ++
Sbjct: 85 RESDPSDPNKDMVVQL---IDDFKISGMNGI-HVCMVFEVLGHHLLKWIIKSNYQGLPVR 140
Query: 128 ALKKWSKQVLEGLEYLHTHEPC-IIHRDLNCSNIFI 162
+K +QVL+GL+YLH+ C IIH D+ NI +
Sbjct: 141 CVKSIIRQVLQGLDYLHS--KCKIIHTDIKPENILM 174
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 31.2 bits (69), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 29/131 (22%)
Query: 118 RKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFIN-------------- 163
R + I+ +K + ++L+ L YL + + H DL NI ++
Sbjct: 128 RNNYNGFHIEDIKLYCIEILKALNYLR--KMSLTHTDLKPENILLDDPYFEKSLITVRRV 185
Query: 164 --GNIGQV--------KIGDLGFAAIVGRSHAAHSIIGTPEYMAPE-LYEEDYTEMVDIY 212
G Q+ K+ D G A H SII T +Y APE + + D++
Sbjct: 186 TDGKKIQIYRTKSTGIKLIDFGCATFKSDYHG--SIINTRQYRAPEVILNLGWDVSSDMW 243
Query: 213 SFGLCLLEMVT 223
SFG L E+ T
Sbjct: 244 SFGCVLAELYT 254
>pdb|2XH4|A Chain A, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39a D321a Mutant Of Yeast Enolase 1
pdb|2XH4|B Chain B, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39a D321a Mutant Of Yeast Enolase 1
pdb|2XH4|C Chain C, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39a D321a Mutant Of Yeast Enolase 1
pdb|2XH4|D Chain D, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39a D321a Mutant Of Yeast Enolase 1
Length = 443
Score = 28.9 bits (63), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 10 DRDGEPFVEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAW 54
D G P VEV+ + G + ++ SGA V+ A + +G + W
Sbjct: 12 DSRGNPTVEVELTTEKGVFRSIVPSGAATGVHEALEMRDGDKSKW 56
>pdb|1L8P|A Chain A, Mg-phosphonoacetohydroxamate Complex Of S39a Yeast
Enolase 1
pdb|1L8P|B Chain B, Mg-phosphonoacetohydroxamate Complex Of S39a Yeast
Enolase 1
pdb|1L8P|C Chain C, Mg-phosphonoacetohydroxamate Complex Of S39a Yeast
Enolase 1
pdb|1L8P|D Chain D, Mg-phosphonoacetohydroxamate Complex Of S39a Yeast
Enolase 1
Length = 436
Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 10 DRDGEPFVEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAW 54
D G P VEV+ + G + ++ SGA V+ A + +G + W
Sbjct: 12 DSRGNPTVEVELTTEKGVFRSIVPSGAATGVHEALEMRDGDKSKW 56
>pdb|2XSX|A Chain A, Crystal Structure Of Human Beta Enolase Enob
pdb|2XSX|B Chain B, Crystal Structure Of Human Beta Enolase Enob
Length = 435
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 10 DRDGEPFVEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEG 49
D G P VEVD GR+ + SGA +Y A + +G
Sbjct: 14 DSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDG 53
>pdb|3N4V|A Chain A, Apo Aph(2")-Iva Form Iii
pdb|3N4V|B Chain B, Apo Aph(2")-Iva Form Iii
Length = 301
Score = 28.5 bits (62), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 126 IKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQV-KIGDLGFAAI 179
+KA+ + + +LE Y + PC+IH D + +I + + I D G AAI
Sbjct: 170 MKAVDDFYRDILENEIYFKYY-PCLIHNDFSSDHILFDTEKNTICGIIDFGDAAI 223
>pdb|1EBG|A Chain A, Chelation Of Ser 39 To Mg2+ Latches A Gate At The Active
Site Of Enolase: Structure Of The Bis(Mg2+) Complex Of
Yeast Enolase And The Intermediate Analog
Phosphonoacetohydroxamate At 2.1 Angstroms Resolution
pdb|1EBG|B Chain B, Chelation Of Ser 39 To Mg2+ Latches A Gate At The Active
Site Of Enolase: Structure Of The Bis(Mg2+) Complex Of
Yeast Enolase And The Intermediate Analog
Phosphonoacetohydroxamate At 2.1 Angstroms Resolution
pdb|1EBH|A Chain A, Octahedral Coordination At The High Affinity Metal Site
In Enolase; Crystallographic Analysis Of The
Mg++-Enzyme From Yeast At 1.9 Angstroms Resolution
pdb|1EBH|B Chain B, Octahedral Coordination At The High Affinity Metal Site
In Enolase; Crystallographic Analysis Of The
Mg++-Enzyme From Yeast At 1.9 Angstroms Resolution
pdb|1ONE|A Chain A, Yeast Enolase Complexed With An Equilibrium Mixture Of
2'- Phosphoglyceate And Phosphoenolpyruvate
pdb|1ONE|B Chain B, Yeast Enolase Complexed With An Equilibrium Mixture Of
2'- Phosphoglyceate And Phosphoenolpyruvate
pdb|2ONE|A Chain A, Asymmetric Yeast Enolase Dimer Complexed With Resolved
2'- Phosphoglycerate And Phosphoenolpyruvate
pdb|2ONE|B Chain B, Asymmetric Yeast Enolase Dimer Complexed With Resolved
2'- Phosphoglycerate And Phosphoenolpyruvate
pdb|2AL1|A Chain A, Crystal Structure Analysis Of Enolase Mg Subunit Complex
At Ph 8.0
pdb|2AL1|B Chain B, Crystal Structure Analysis Of Enolase Mg Subunit Complex
At Ph 8.0
Length = 436
Score = 28.1 bits (61), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 10 DRDGEPFVEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAW 54
D G P VEV+ + G + ++ SGA V+ A + +G + W
Sbjct: 12 DSRGNPTVEVELTTEKGVFRSIVPSGASTGVHEALEMRDGDKSKW 56
>pdb|2XH7|A Chain A, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The D321a Mutant Of Yeast Enolase 1
pdb|2XH7|B Chain B, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The D321a Mutant Of Yeast Enolase 1
Length = 443
Score = 28.1 bits (61), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 10 DRDGEPFVEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAW 54
D G P VEV+ + G + ++ SGA V+ A + +G + W
Sbjct: 12 DSRGNPTVEVELTTEKGVFRSIVPSGASTGVHEALEMRDGDKSKW 56
>pdb|1P48|A Chain A, Reverse Protonation Is The Key To General Acid-Base
Catalysis In Enolase
pdb|1P48|B Chain B, Reverse Protonation Is The Key To General Acid-Base
Catalysis In Enolase
Length = 436
Score = 28.1 bits (61), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 10 DRDGEPFVEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAW 54
D G P VEV+ + G + ++ SGA V+ A + +G + W
Sbjct: 12 DSRGNPTVEVELTTEKGVFRSIVPSGASTGVHEALEMRDGDKSKW 56
>pdb|1P43|A Chain A, Reverse Protonation Is The Key To General Acid-Base
Catalysis In Enolase
pdb|1P43|B Chain B, Reverse Protonation Is The Key To General Acid-Base
Catalysis In Enolase
Length = 436
Score = 28.1 bits (61), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 10 DRDGEPFVEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAW 54
D G P VEV+ + G + ++ SGA V+ A + +G + W
Sbjct: 12 DSRGNPTVEVELTTEKGVFRSIVPSGASTGVHEALEMRDGDKSKW 56
>pdb|1ELS|A Chain A, Catalytic Metal Ion Binding In Enolase: The Crystal
Structure Of Enolase-Mn2+-Phosphonoacetohydroxamate
Complex At 2.4 Angstroms Resolution
pdb|1NEL|A Chain A, Fluoride Inhibition Of Yeast Enolase: Crystal Structure
Of The Enolase-mg2+-f--pi Complex At 2.6-angstroms
Resolution
pdb|3ENL|A Chain A, Refined Structure Of Yeast Apo-Enolase At 2.25 Angstroms
Resolution
pdb|4ENL|A Chain A, Crystal Structure Of Holoenzyme Refined At 1.9 Angstroms
Resolution: Trigonal-Bipyramidal Geometry Of The Cation
Binding Site
pdb|5ENL|A Chain A, Inhibition Of Enolase: The Crystal Structures Of
Enolase- Ca2+-Phosphoglycerate And
Enolase-Zn2+-Phosphoglycolate Complexes At
2.2-Angstroms Resolution
pdb|6ENL|A Chain A, Inhibition Of Enolase: The Crystal Structures Of
Enolase- Ca2+-Phosphoglycerate And
Enolase-Zn2+-Phosphoglycolate Complexes At
2.2-Angstroms Resolution
pdb|7ENL|A Chain A, Mechanism Of Enolase: The Crystal Structure Of
Enolase-Mg2+- Phosphoglycerate(Slash)
Phosphoenolpyruvate Complex At 2.2-Angstroms Resolution
Length = 436
Score = 28.1 bits (61), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 10 DRDGEPFVEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAW 54
D G P VEV+ + G + ++ SGA V+ A + +G + W
Sbjct: 12 DSRGNPTVEVELTTEKGVFRSIVPSGASTGVHEALEMRDGDKSKW 56
>pdb|2AL2|A Chain A, Crystal Structure Analysis Of Enolase Mg Subunit Complex
At Ph 8.0
Length = 436
Score = 28.1 bits (61), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 10 DRDGEPFVEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAW 54
D G P VEV+ + G + ++ SGA V+ A + +G + W
Sbjct: 12 DSRGNPTVEVELTTEKGVFRSIVPSGASTGVHEALEMRDGDKSKW 56
>pdb|2AL2|B Chain B, Crystal Structure Analysis Of Enolase Mg Subunit Complex
At Ph 8.0
Length = 436
Score = 28.1 bits (61), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 10 DRDGEPFVEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAW 54
D G P VEV+ + G + ++ SGA V+ A + +G + W
Sbjct: 12 DSRGNPTVEVELTTEKGVFRSIVPSGASTGVHEALEMRDGDKSKW 56
>pdb|1PZ3|A Chain A, Crystal Structure Of A Family 51 (gh51)
Alpha-l-arabinofuranosidase From Geobacillus
Stearothermophilus T6
pdb|1PZ3|B Chain B, Crystal Structure Of A Family 51 (gh51)
Alpha-l-arabinofuranosidase From Geobacillus
Stearothermophilus T6
Length = 502
Score = 28.1 bits (61), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 177 AAIVGRSHAAHSIIGTPEYMAPELYEEDYTEMVDIYS 213
A++ GR A H +I +P+Y + + + Y E + +Y+
Sbjct: 379 ASVYGRGVALHPVISSPKYDSKDFTDVPYLESIAVYN 415
>pdb|1PZ2|A Chain A, Crystal Structure Of A Transient Covalent Reaction
Intermediate Of A Family 51 Alpha-L-Arabinofuranosidase
pdb|1PZ2|B Chain B, Crystal Structure Of A Transient Covalent Reaction
Intermediate Of A Family 51 Alpha-L-Arabinofuranosidase
pdb|1QW8|A Chain A, Crystal Structure Of A Family 51 Alpha-L-
Arabinofuranosidase In Complex With Ara-Alpha(1,3)-Xyl
pdb|1QW8|B Chain B, Crystal Structure Of A Family 51 Alpha-L-
Arabinofuranosidase In Complex With Ara-Alpha(1,3)-Xyl
pdb|1QW9|A Chain A, Crystal Structure Of A Family 51 Alpha-L-
Arabinofuranosidase In Complex With 4-Nitrophenyl-Ara
pdb|1QW9|B Chain B, Crystal Structure Of A Family 51 Alpha-L-
Arabinofuranosidase In Complex With 4-Nitrophenyl-Ara
Length = 502
Score = 28.1 bits (61), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 177 AAIVGRSHAAHSIIGTPEYMAPELYEEDYTEMVDIYS 213
A++ GR A H +I +P+Y + + + Y E + +Y+
Sbjct: 379 ASVYGRGVALHPVISSPKYDSKDFTDVPYLESIAVYN 415
>pdb|2XH2|A Chain A, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39n D321a Mutant Of Yeast Enolase 1
pdb|2XH2|B Chain B, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39n D321a Mutant Of Yeast Enolase 1
pdb|2XH2|C Chain C, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39n D321a Mutant Of Yeast Enolase 1
pdb|2XH2|D Chain D, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39n D321a Mutant Of Yeast Enolase 1
Length = 443
Score = 27.7 bits (60), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 10 DRDGEPFVEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAW 54
D G P VEV+ + G + ++ SGA V+ A + +G + W
Sbjct: 12 DSRGNPTVEVELTTEKGVFRSIVPSGANTGVHEALEMRDGDKSKW 56
>pdb|2XGZ|A Chain A, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39n D321r Mutant Of Yeast Enolase 1
pdb|2XGZ|B Chain B, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39n D321r Mutant Of Yeast Enolase 1
Length = 443
Score = 27.7 bits (60), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 10 DRDGEPFVEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAW 54
D G P VEV+ + G + ++ SGA V+ A + +G + W
Sbjct: 12 DSRGNPTVEVELTTEKGVFRSIVPSGANTGVHEALEMRDGDKSKW 56
>pdb|2XH0|A Chain A, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39n Q167k D321r Mutant Of Yeast
Enolase 1
pdb|2XH0|B Chain B, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39n Q167k D321r Mutant Of Yeast
Enolase 1
pdb|2XH0|C Chain C, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39n Q167k D321r Mutant Of Yeast
Enolase 1
pdb|2XH0|D Chain D, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39n Q167k D321r Mutant Of Yeast
Enolase 1
Length = 443
Score = 27.7 bits (60), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 10 DRDGEPFVEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAW 54
D G P VEV+ + G + ++ SGA V+ A + +G + W
Sbjct: 12 DSRGNPTVEVELTTEKGVFRSIVPSGANTGVHEALEMRDGDKSKW 56
>pdb|1GO3|E Chain E, Structure Of An Archeal Homolog Of The Eukaryotic Rna
Polymerase Ii Rpb4RPB7 COMPLEX
pdb|1GO3|M Chain M, Structure Of An Archeal Homolog Of The Eukaryotic Rna
Polymerase Ii Rpb4RPB7 COMPLEX
Length = 187
Score = 27.3 bits (59), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 169 VKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPELYEEDYTEMVDIYSFG 215
V + D+G +V G A H ++ PE+YE E+VD+ FG
Sbjct: 49 VDVKDIGEGKVVHGDGSAYHPVVFETLVYIPEMYELIEGEVVDVVEFG 96
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,447,938
Number of Sequences: 62578
Number of extensions: 402120
Number of successful extensions: 3153
Number of sequences better than 100.0: 993
Number of HSP's better than 100.0 without gapping: 259
Number of HSP's successfully gapped in prelim test: 734
Number of HSP's that attempted gapping in prelim test: 1658
Number of HSP's gapped (non-prelim): 1023
length of query: 296
length of database: 14,973,337
effective HSP length: 98
effective length of query: 198
effective length of database: 8,840,693
effective search space: 1750457214
effective search space used: 1750457214
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)