BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>022480
MAFTATPLFSSTASSSSTALHRSKFLDSDFAAPFSHDSFHLINFSRRFYEQGICLSRKNR
NILFASVNGTNAVSPTPLKSDQDADYIPMPHVLIDQDSNSDATIVQLSFGDRLGALIDTM
NALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLKYHPE
SSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETADRPGLLVEIMKIIAD
VNVDVESAEIDTEGLVAKDKFHVSYGGAALNSSLSQVLVNCLRYYLRRPETDIDSY

High Scoring Gene Products

Symbol, full name Information P value
ACR12
ACT domain repeats 12
protein from Arabidopsis thaliana 1.0e-98
ACR11
ACT domain repeats 11
protein from Arabidopsis thaliana 8.6e-72
ACR5
ACT domain repeat 5
protein from Arabidopsis thaliana 5.8e-09
ACR4
ACT domain repeat 4
protein from Arabidopsis thaliana 5.4e-08
ACR7
AT4G22780
protein from Arabidopsis thaliana 2.3e-07
ACR6
ACT domain repeat 6
protein from Arabidopsis thaliana 7.6e-07
ACR8
AT1G12420
protein from Arabidopsis thaliana 2.1e-06
ACR1
AT5G65890
protein from Arabidopsis thaliana 4.3e-06
ACR3
AT1G76990
protein from Arabidopsis thaliana 1.2e-05
SPO_0397
protein-P-II uridylyltransferase
protein from Ruegeria pomeroyi DSS-3 0.00013
AT5G25320 protein from Arabidopsis thaliana 0.00030

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  022480
        (296 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2175458 - symbol:ACR12 "ACT domain repeats 12"...   980  1.0e-98   1
TAIR|locus:2015616 - symbol:ACR11 "ACT domain repeats 11"...   726  8.6e-72   1
TAIR|locus:2044289 - symbol:ACR5 "ACT domain repeat 5" sp...   109  5.8e-09   2
TAIR|locus:2033223 - symbol:ACR4 "ACT domain repeat 4" sp...   113  5.4e-08   2
TAIR|locus:2132609 - symbol:ACR7 "ACT domain repeat 7" sp...    95  2.3e-07   2
TAIR|locus:2078678 - symbol:ACR6 "ACT domain repeat 6" sp...   115  7.6e-07   2
TAIR|locus:2034630 - symbol:ACR8 "AT1G12420" species:3702...   114  2.1e-06   2
TAIR|locus:2152094 - symbol:ACR1 "ACT domain repeat 1" sp...   106  4.3e-06   2
TAIR|locus:2025317 - symbol:ACR3 "ACT domain repeat 3" sp...    98  1.2e-05   2
TIGR_CMR|SPO_0397 - symbol:SPO_0397 "protein-P-II uridyly...   124  0.00013   1
TAIR|locus:2145482 - symbol:AT5G25320 species:3702 "Arabi...   101  0.00030   2


>TAIR|locus:2175458 [details] [associations]
            symbol:ACR12 "ACT domain repeats 12" species:3702
            "Arabidopsis thaliana" [GO:0008152 "metabolic process"
            evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
            [GO:0016597 "amino acid binding" evidence=IEA] [GO:0009535
            "chloroplast thylakoid membrane" evidence=IDA] [GO:0009570
            "chloroplast stroma" evidence=IDA] [GO:0019408 "dolichol
            biosynthetic process" evidence=RCA] InterPro:IPR002912 Pfam:PF01842
            EMBL:CP002688 GO:GO:0009570 GO:GO:0016597 GO:GO:0008152
            GO:GO:0009535 EMBL:AL162972 EMBL:AB008271 EMBL:AY072401
            EMBL:AY114702 EMBL:JF797177 IPI:IPI00527532 PIR:T48470
            RefSeq:NP_196094.1 UniGene:At.22197 ProteinModelPortal:Q9LZ23
            IntAct:Q9LZ23 PRIDE:Q9LZ23 EnsemblPlants:AT5G04740.1 GeneID:830352
            KEGG:ath:AT5G04740 TAIR:At5g04740 InParanoid:Q9LZ23 OMA:ATHIHVK
            PhylomeDB:Q9LZ23 ProtClustDB:CLSN2916259 ArrayExpress:Q9LZ23
            Genevestigator:Q9LZ23 Uniprot:Q9LZ23
        Length = 301

 Score = 980 (350.0 bits), Expect = 1.0e-98, P = 1.0e-98
 Identities = 194/254 (76%), Positives = 224/254 (88%)

Query:    46 RRFYEQGIC--LSRKNRNILFASVNGTN-AVSPTPLKSDQDADYIPMPHVLIDQDSNSDA 102
             RR +  G+   L++  +N ++AS+N  + A +P+  KS+ D D +PMP V+IDQD++ +A
Sbjct:    48 RRKFVGGVMSLLTKSIKNRVYASINSIDSAATPSYPKSEDDDDVVPMPMVMIDQDADPEA 107

Query:   103 TIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDL 162
             TIVQLSFG+RLGALIDTM ALKDLGLDV KGTV+TEGS+KQTKF IT+ DTGRKVEDPDL
Sbjct:   108 TIVQLSFGNRLGALIDTMRALKDLGLDVIKGTVSTEGSIKQTKFSITKRDTGRKVEDPDL 167

Query:   163 LERIRLTIINNLLKYHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYI 222
             LE+IRLTIINNLLKYHPE SEQLAMGE FGIKAPEKK+DVDIATHIHVKEDGPKRSLL I
Sbjct:   168 LEQIRLTIINNLLKYHPECSEQLAMGETFGIKAPEKKIDVDIATHIHVKEDGPKRSLLVI 227

Query:   223 ETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGGAALNSSLSQVLVNCL 282
             ETADRPGL+VE++K++ADVN+DVESAEIDTEGLVAKDKFHVSY G ALN SLSQVLVNCL
Sbjct:   228 ETADRPGLVVEMIKVMADVNIDVESAEIDTEGLVAKDKFHVSYQGQALNRSLSQVLVNCL 287

Query:   283 RYYLRRPETDIDSY 296
             RY+LRRPETDIDSY
Sbjct:   288 RYFLRRPETDIDSY 301


>TAIR|locus:2015616 [details] [associations]
            symbol:ACR11 "ACT domain repeats 11" species:3702
            "Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
            [GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
            "chloroplast thylakoid membrane" evidence=IDA] [GO:0009570
            "chloroplast stroma" evidence=IDA] [GO:0009409 "response to cold"
            evidence=IEP;RCA] [GO:0010319 "stromule" evidence=IDA] [GO:0009416
            "response to light stimulus" evidence=IEP] [GO:0009744 "response to
            sucrose stimulus" evidence=IEP] [GO:0006833 "water transport"
            evidence=RCA] [GO:0009651 "response to salt stress" evidence=RCA]
            [GO:0009750 "response to fructose stimulus" evidence=RCA]
            [GO:0019684 "photosynthesis, light reaction" evidence=RCA]
            [GO:0030003 "cellular cation homeostasis" evidence=RCA] [GO:0042742
            "defense response to bacterium" evidence=RCA] [GO:0070838 "divalent
            metal ion transport" evidence=RCA] EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0009570 GO:GO:0009409 GO:GO:0009744
            GO:GO:0009941 GO:GO:0009416 GO:GO:0009535 EMBL:AC051629
            GO:GO:0010319 GO:GO:0016779 UniGene:At.19280 EMBL:AF386988
            EMBL:BT006317 EMBL:JF797176 IPI:IPI00517825 PIR:B86304
            RefSeq:NP_564010.1 UniGene:At.16052 UniGene:At.24697
            ProteinModelPortal:Q9FZ47 SMR:Q9FZ47 STRING:Q9FZ47 PaxDb:Q9FZ47
            PRIDE:Q9FZ47 ProMEX:Q9FZ47 EnsemblPlants:AT1G16880.1 GeneID:838259
            KEGG:ath:AT1G16880 TAIR:At1g16880 eggNOG:NOG288292
            HOGENOM:HOG000243969 InParanoid:Q9FZ47 OMA:SQLAMGA PhylomeDB:Q9FZ47
            ProtClustDB:CLSN2687834 Genevestigator:Q9FZ47 Uniprot:Q9FZ47
        Length = 290

 Score = 726 (260.6 bits), Expect = 8.6e-72, P = 8.6e-72
 Identities = 141/217 (64%), Positives = 175/217 (80%)

Query:    80 SDQDADYIPMPHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEG 139
             S  D+D +P P V+IDQDS+ DAT+++++FGDRLGAL+DTMNALK+LGL+V K  V  + 
Sbjct:    74 SAADSDKVPTPVVIIDQDSDPDATVLEVTFGDRLGALLDTMNALKNLGLNVVKANVYLDS 133

Query:   140 SVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLKYHPESSEQLAMGEAFGIKAPEKK 199
             S K  KF ITR D+GRKVEDP+LLE IRLT+INNLL++HPESS QLAMG AFG+  P + 
Sbjct:   134 SGKHNKFAITRADSGRKVEDPELLEAIRLTVINNLLEFHPESSSQLAMGAAFGVLPPTEP 193

Query:   200 LDVDIATHIHVKEDGPKRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKD 259
             +DVDIATHI +++DGP RSLL+IE+ADRPGLLVE++KII+D++V VES E DTEGL+AK 
Sbjct:   194 IDVDIATHITIEDDGPDRSLLFIESADRPGLLVELVKIISDISVAVESGEFDTEGLLAKV 253

Query:   260 KFHVSYGGAALNSSLSQVLVNCLRYYLRRPETDIDSY 296
             KFHVSY   AL   L QVL N LRY+LRRP TD  S+
Sbjct:   254 KFHVSYRNKALIKPLQQVLANSLRYFLRRPSTDESSF 290


>TAIR|locus:2044289 [details] [associations]
            symbol:ACR5 "ACT domain repeat 5" species:3702
            "Arabidopsis thaliana" [GO:0008152 "metabolic process"
            evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM] [GO:0016597
            "amino acid binding" evidence=IEA;ISS] InterPro:IPR002912
            Pfam:PF01842 EMBL:CP002685 GO:GO:0016740 GO:GO:0016597
            EMBL:AC006836 HOGENOM:HOG000239159 EMBL:BT000908 EMBL:AK317500
            IPI:IPI00543949 RefSeq:NP_001030965.1 RefSeq:NP_565304.1
            UniGene:At.25112 ProteinModelPortal:Q9ZPQ8 SMR:Q9ZPQ8 PRIDE:Q9ZPQ8
            EnsemblPlants:AT2G03730.1 EnsemblPlants:AT2G03730.2 GeneID:814900
            KEGG:ath:AT2G03730 TAIR:At2g03730 InParanoid:Q9ZPQ8 OMA:DEETCSA
            PhylomeDB:Q9ZPQ8 ProtClustDB:CLSN2687948 ArrayExpress:Q9ZPQ8
            Genevestigator:Q9ZPQ8 Uniprot:Q9ZPQ8
        Length = 456

 Score = 109 (43.4 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
 Identities = 24/81 (29%), Positives = 45/81 (55%)

Query:    90 PHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFIT 149
             P V+ID +   D T++++   ++ G L++ +  L +L L + K  ++++G      F +T
Sbjct:    25 PRVVIDNEVCKDVTVIKVDSANKHGILLEVVQVLTELNLTIKKAYISSDGGWFMDVFNVT 84

Query:   150 RLDTGRKVEDPDLLERIRLTI 170
               D G KV D  +LE IR ++
Sbjct:    85 DQD-GNKVTDEIVLEYIRKSL 104

 Score = 94 (38.1 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
 Identities = 26/90 (28%), Positives = 50/90 (55%)

Query:   201 DVDIATHIHVKEDGPKRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDK 260
             DVD++ ++H  +     S++ I+  DRP LL + +  + D+N  V  A ID EG  A  +
Sbjct:   258 DVDVS-NLHDLD----YSIVMIKCKDRPKLLFDTVFTLTDMNYVVSHASIDAEGPQAYQE 312

Query:   261 FHVSY-GGAALNSSLS-QVLVNCLRYYLRR 288
             +++ +  G+ + S    Q ++ CL+  ++R
Sbjct:   313 YYIRHTDGSPVKSEAERQRVIKCLKAAIQR 342

 Score = 82 (33.9 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
 Identities = 24/90 (26%), Positives = 40/90 (44%)

Query:    78 LKSDQDADYIPMPHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNT 137
             L  D+ + + P     I    + D T+V+L+  DR G L +    L DL  +V    + T
Sbjct:   104 LGPDESSCFSPSMRSTIGVKQSVDYTVVELTGTDRPGLLSELCAVLMDLQCNVVNAEIWT 163

Query:   138 EGSVKQTKFFITRLDTGRKVEDPDLLERIR 167
               +       +T  +T   + DP+ L +IR
Sbjct:   164 HRAKAAAVLQVTDEETCSAITDPERLSKIR 193

 Score = 69 (29.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
 Identities = 15/40 (37%), Positives = 26/40 (65%)

Query:   224 TADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHV 263
             T+DR GLL ++ +I  + ++ V  AE+ T+G  A + F+V
Sbjct:   354 TSDRVGLLSDVTRIFRENSLTVTRAEVKTKGDKALNTFYV 393

 Score = 66 (28.3 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
 Identities = 18/43 (41%), Positives = 27/43 (62%)

Query:   214 GPKRSLLY--IETA--DRPGLLVEIMKIIADVNVDVESAEIDT 252
             G K+S+ Y  +E    DRPGLL E+  ++ D+  +V +AEI T
Sbjct:   121 GVKQSVDYTVVELTGTDRPGLLSELCAVLMDLQCNVVNAEIWT 163


>TAIR|locus:2033223 [details] [associations]
            symbol:ACR4 "ACT domain repeat 4" species:3702
            "Arabidopsis thaliana" [GO:0008152 "metabolic process"
            evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM] [GO:0016597
            "amino acid binding" evidence=IEA] [GO:0005829 "cytosol"
            evidence=ISS] [GO:0006521 "regulation of cellular amino acid
            metabolic process" evidence=ISS] [GO:0009735 "response to cytokinin
            stimulus" evidence=IEP] InterPro:IPR002912 Pfam:PF01842
            EMBL:CP002684 GO:GO:0005829 GO:GO:0009735 GO:GO:0016597
            GO:GO:0008152 GO:GO:0006521 IPI:IPI00547811 RefSeq:NP_974107.1
            UniGene:At.35453 ProteinModelPortal:F4I0I7 PRIDE:F4I0I7
            EnsemblPlants:AT1G69040.2 GeneID:843236 KEGG:ath:AT1G69040
            OMA:HGSVDTE PhylomeDB:F4I0I7 Uniprot:F4I0I7
        Length = 455

 Score = 113 (44.8 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
 Identities = 25/81 (30%), Positives = 45/81 (55%)

Query:    90 PHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFIT 149
             P V+ID DS   AT++++   +  G L++ +  L DL L + K  ++++G      F +T
Sbjct:    25 PRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYISSDGGWFMDVFNVT 84

Query:   150 RLDTGRKVEDPDLLERIRLTI 170
               D G KV D  +L+ I+ ++
Sbjct:    85 DQD-GNKVTDEVVLDYIQKSL 104

 Score = 85 (35.0 bits), Expect = 0.00088, Sum P(2) = 0.00088
 Identities = 22/77 (28%), Positives = 40/77 (51%)

Query:    90 PHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFIT 149
             P V +D   + D ++V +   DR   L DT+  L D+   V  G+V+TEG+    ++++ 
Sbjct:   249 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVR 308

Query:   150 RLDTGRKVEDPDLLERI 166
              +D G  V+     +R+
Sbjct:   309 HID-GSPVKSEAEKQRV 324

 Score = 80 (33.2 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
 Identities = 20/73 (27%), Positives = 38/73 (52%)

Query:   218 SLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSY-GGAALNSSLS- 275
             S++ +   DRP LL + +  + D+   V    +DTEG  A  +++V +  G+ + S    
Sbjct:   262 SVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVRHIDGSPVKSEAEK 321

Query:   276 QVLVNCLRYYLRR 288
             Q ++ CL   ++R
Sbjct:   322 QRVIQCLEAAIKR 334

 Score = 80 (33.2 bits), Expect = 0.00031, Sum P(2) = 0.00031
 Identities = 22/78 (28%), Positives = 39/78 (50%)

Query:    99 NSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVE 158
             ++D+T+++L+  DR G L +    L  L   V    + T  +       +T   TG  + 
Sbjct:   122 STDSTVIELTGCDRPGLLSELSAVLTHLKCSVLNAEIWTHNTRAAAVMQVTDDLTGCGIS 181

Query:   159 DPDLLERIRLTIINNLLK 176
             DP+ L RI+  ++ N+LK
Sbjct:   182 DPERLSRIK-NLLRNVLK 198

 Score = 70 (29.7 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
 Identities = 16/41 (39%), Positives = 25/41 (60%)

Query:   224 TADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 264
             T DR GLL  + +I  + ++ V  AE+ T+G  A + F+VS
Sbjct:   346 TTDRVGLLSNVTRIFRENSLTVTRAEVKTKGGKALNTFYVS 386

 Score = 59 (25.8 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
 Identities = 22/78 (28%), Positives = 37/78 (47%)

Query:   218 SLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS--YGGAALNSS-- 273
             +++ +   DRPGLL E+  ++  +   V +AEI T    A     V+    G  ++    
Sbjct:   126 TVIELTGCDRPGLLSELSAVLTHLKCSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPER 185

Query:   274 LSQVLVNCLRYYLRRPET 291
             LS++  N LR  L+   T
Sbjct:   186 LSRIK-NLLRNVLKGSNT 202


>TAIR|locus:2132609 [details] [associations]
            symbol:ACR7 "ACT domain repeat 7" species:3702
            "Arabidopsis thaliana" [GO:0008152 "metabolic process"
            evidence=IEA] [GO:0016597 "amino acid binding" evidence=IEA;ISS]
            [GO:0005829 "cytosol" evidence=ISS] InterPro:IPR002912 Pfam:PF01842
            GO:GO:0005829 EMBL:CP002687 GO:GO:0016597 GO:GO:0008152
            EMBL:AF528063 EMBL:BT029176 IPI:IPI00537192 RefSeq:NP_194009.2
            UniGene:At.32498 ProteinModelPortal:Q8LJW1
            EnsemblPlants:AT4G22780.1 GeneID:828377 KEGG:ath:AT4G22780
            TAIR:At4g22780 InParanoid:Q8LJW1 OMA:VLADLEC PhylomeDB:Q8LJW1
            ProtClustDB:CLSN2682266 Genevestigator:Q8LJW1 Uniprot:Q8LJW1
        Length = 449

 Score = 95 (38.5 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
 Identities = 22/82 (26%), Positives = 45/82 (54%)

Query:    89 MPHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFI 148
             MP V+ID     ++T+V++      G L++++  L D+ L + K  ++++G      F +
Sbjct:    19 MPRVVIDNGVCPNSTVVKIDSARSPGILLESVQLLTDMNLWIKKAYISSDGKWNMDVFHV 78

Query:   149 TRLDTGRKVEDPDLLERIRLTI 170
             + L+ G K+ D +L+  I  +I
Sbjct:    79 SDLN-GDKLTDENLIRYIEKSI 99

 Score = 94 (38.1 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
 Identities = 17/41 (41%), Positives = 30/41 (73%)

Query:   224 TADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 264
             TADRPGLL E+ +I+ +  +++  AEI T+  +A++ F+V+
Sbjct:   329 TADRPGLLAEVTRILRENGLNIARAEISTKDSIARNVFYVT 369

 Score = 64 (27.6 bits), Expect = 0.00026, Sum P(2) = 0.00026
 Identities = 19/60 (31%), Positives = 31/60 (51%)

Query:   200 LDVDIATHIHVKEDG-PKRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTE-GLVA 257
             ++  I T  + K +G    + L +   DR GLL E+  ++AD+  DV  A+  T  G +A
Sbjct:    95 IEKSIETSHYCKTEGYTGLTALELTGTDRVGLLSEVFAVLADLECDVVEAKAWTHNGRIA 154


>TAIR|locus:2078678 [details] [associations]
            symbol:ACR6 "ACT domain repeat 6" species:3702
            "Arabidopsis thaliana" [GO:0008152 "metabolic process"
            evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM] [GO:0016597
            "amino acid binding" evidence=IEA;ISS] [GO:0019408 "dolichol
            biosynthetic process" evidence=RCA] InterPro:IPR002912 Pfam:PF01842
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016597 GO:GO:0008152
            EMBL:AC011664 HOGENOM:HOG000239159 EMBL:AF528062 EMBL:BT005556
            EMBL:AK118222 IPI:IPI00523079 RefSeq:NP_186848.1 UniGene:At.41200
            ProteinModelPortal:Q9SGA0 SMR:Q9SGA0 IntAct:Q9SGA0
            EnsemblPlants:AT3G01990.1 GeneID:821217 KEGG:ath:AT3G01990
            TAIR:At3g01990 eggNOG:NOG253960 InParanoid:Q9SGA0 OMA:RRLHQIM
            PhylomeDB:Q9SGA0 ProtClustDB:CLSN2915706 ArrayExpress:Q9SGA0
            Genevestigator:Q9SGA0 Uniprot:Q9SGA0
        Length = 433

 Score = 115 (45.5 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
 Identities = 24/84 (28%), Positives = 48/84 (57%)

Query:    90 PHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFIT 149
             P V+ID +++ DAT++Q+   ++ G L++ +  L D+ L + K  ++++G      F + 
Sbjct:    16 PRVVIDNNASDDATVIQVDSVNKHGTLLEVVQVLTDMNLVIKKAYISSDGGWFMDVFKVI 75

Query:   150 RLDTGRKVEDPDLLERIRLTIINN 173
               D G K+ D  +L+ I+  I +N
Sbjct:    76 DQD-GNKIRDTQVLDYIQKRIESN 98

 Score = 66 (28.3 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
 Identities = 16/45 (35%), Positives = 25/45 (55%)

Query:   220 LYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 264
             L +   DR GLL +I +   + ++ +  AEI T    AKD F+V+
Sbjct:   329 LELSAEDRVGLLSDITRTFRENSLTIVRAEISTREGKAKDTFYVT 373


>TAIR|locus:2034630 [details] [associations]
            symbol:ACR8 "AT1G12420" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008152
            "metabolic process" evidence=IEA] [GO:0016597 "amino acid binding"
            evidence=IEA;ISS] [GO:0009737 "response to abscisic acid stimulus"
            evidence=IEP] InterPro:IPR002912 Pfam:PF01842 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0016597 GO:GO:0008152
            EMBL:AC025416 eggNOG:COG2844 HOGENOM:HOG000239159
            ProtClustDB:CLSN2682266 EMBL:AF528064 EMBL:BT026518 EMBL:AK228687
            IPI:IPI00525793 PIR:F86258 RefSeq:NP_172704.1 UniGene:At.42075
            ProteinModelPortal:Q9LNA5 SMR:Q9LNA5 PRIDE:Q9LNA5
            EnsemblPlants:AT1G12420.1 GeneID:837798 KEGG:ath:AT1G12420
            TAIR:At1g12420 InParanoid:Q9LNA5 OMA:DDSVITY PhylomeDB:Q9LNA5
            Genevestigator:Q9LNA5 Uniprot:Q9LNA5
        Length = 441

 Score = 114 (45.2 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
 Identities = 27/81 (33%), Positives = 44/81 (54%)

Query:    90 PHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFIT 149
             P V+ID    S ATIV++    R G L++ +  L DL L + K  ++++G+     F +T
Sbjct:    20 PRVVIDNGVCSSATIVKVDSSRRNGILLEAVQILTDLNLSIKKAYISSDGTWNMDVFHVT 79

Query:   150 RLDTGRKVEDPDLLERIRLTI 170
              L+ G K+ D  +L  I  +I
Sbjct:    80 DLN-GNKLNDQSVLRYIEQSI 99

 Score = 63 (27.2 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
 Identities = 16/39 (41%), Positives = 24/39 (61%)

Query:   220 LYIETADRPGLLVEIMKIIADVNVDVESAEIDTE-GLVA 257
             L +   DR GLL E+  +++D+N DV  A++ T  G VA
Sbjct:   116 LELTGTDRIGLLSEMFAVLSDLNCDVVDAKLWTHNGRVA 154

 Score = 58 (25.5 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
 Identities = 18/73 (24%), Positives = 37/73 (50%)

Query:   218 SLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSY-GGAALNSSLS- 275
             S++ +   DR  LL +++  + D+   V  A I+T    A  +F++ +  G+ ++S    
Sbjct:   247 SVVNVHCRDRTKLLFDVVCTLTDMEYAVFHATINTAEDQAHLEFYIRHKDGSPISSEAER 306

Query:   276 QVLVNCLRYYLRR 288
             Q ++ CL   + R
Sbjct:   307 QRVIQCLEAAVER 319

 Score = 57 (25.1 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
 Identities = 13/45 (28%), Positives = 24/45 (53%)

Query:   220 LYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 264
             L +   D+ GLL E+ +   +  ++V   EI T   +A + F+V+
Sbjct:   327 LELRHPDKQGLLAEVTRTFRENGLNVTRTEISTSSDMATNIFYVT 371


>TAIR|locus:2152094 [details] [associations]
            symbol:ACR1 "ACT domain repeat 1" species:3702
            "Arabidopsis thaliana" [GO:0008152 "metabolic process"
            evidence=IEA] [GO:0016597 "amino acid binding" evidence=IEA;ISS]
            [GO:0005634 "nucleus" evidence=ISS] InterPro:IPR002912 Pfam:PF01842
            GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016740
            GO:GO:0016597 EMBL:AB018108 HOGENOM:HOG000239159 EMBL:AF360256
            EMBL:AY040070 EMBL:AF528058 IPI:IPI00525533 RefSeq:NP_201390.1
            UniGene:At.1913 ProteinModelPortal:Q9FHP1 EnsemblPlants:AT5G65890.1
            GeneID:836718 KEGG:ath:AT5G65890 TAIR:At5g65890 InParanoid:Q9FHP1
            OMA:RHVSTEH PhylomeDB:Q9FHP1 ProtClustDB:CLSN2686653
            ArrayExpress:Q9FHP1 Genevestigator:Q9FHP1 Uniprot:Q9FHP1
        Length = 477

 Score = 106 (42.4 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
 Identities = 23/84 (27%), Positives = 46/84 (54%)

Query:    90 PHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFIT 149
             P V +D DS+ + T++++   ++ G L+D +  L DL L ++K  ++++G      F +T
Sbjct:    24 PRVCVDNDSDPECTLIKVDSANKYGILLDMVQVLADLDLVISKCYISSDGEWFMDVFHVT 83

Query:   150 RLDTGRKVEDPDLLERIRLTIINN 173
                 G K+ D  L+  I+  I ++
Sbjct:    84 D-QLGNKLTDRSLILYIQQAICSS 106

 Score = 70 (29.7 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
 Identities = 17/61 (27%), Positives = 34/61 (55%)

Query:   220 LYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS--YGGAALNSSLSQV 277
             L I T ++ GLL ++ +++ +  + +  AE+ T+G +A   F+V+   GG    S +  V
Sbjct:   362 LEIRTENKMGLLSDVTRVVRENGLSITRAEMCTQGEIAVGSFYVTDVNGGETGPSEVEAV 421

Query:   278 L 278
             +
Sbjct:   422 V 422

 Score = 58 (25.5 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
 Identities = 12/51 (23%), Positives = 26/51 (50%)

Query:   198 KKLDVDIATHIHVKEDGPKRSLLYIETADRPGLLVEIMKIIADVNVDVESA 248
             K++  ++   +  +    + +   I   +RPGLL EI  +++D+   V +A
Sbjct:   113 KEMQSNLKREVQQRHVSTEHTAFEITGINRPGLLSEISAVLSDIGCHVTAA 163

 Score = 50 (22.7 bits), Expect = 0.00047, Sum P(2) = 0.00047
 Identities = 15/67 (22%), Positives = 31/67 (46%)

Query:   218 SLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHV--SYGGAALNSSLS 275
             S++ ++  DRP LL + +  + ++   V  A    +G  A+ ++ +    GG        
Sbjct:   282 SMVNVKCRDRPKLLFDTVCALKELQFVVFHAVAGAKGSTAEQEYFIRKKNGGTLETEGQR 341

Query:   276 QVLVNCL 282
             + L +CL
Sbjct:   342 ERLRHCL 348


>TAIR|locus:2025317 [details] [associations]
            symbol:ACR3 "ACT domain repeat 3" species:3702
            "Arabidopsis thaliana" [GO:0006807 "nitrogen compound metabolic
            process" evidence=IEA] [GO:0008152 "metabolic process"
            evidence=IEA] [GO:0008773 "[protein-PII] uridylyltransferase
            activity" evidence=IEA] [GO:0016597 "amino acid binding"
            evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=TAS] [GO:0019243
            "methylglyoxal catabolic process to D-lactate" evidence=RCA]
            [GO:0019344 "cysteine biosynthetic process" evidence=RCA]
            InterPro:IPR002912 Pfam:PF01842 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0016597 GO:GO:0008152
            EMBL:AC002291 eggNOG:COG2844 EMBL:AF360322 EMBL:AY113891
            EMBL:AF528059 EMBL:AK317369 IPI:IPI00527978 PIR:H96798
            RefSeq:NP_001031289.1 RefSeq:NP_001117608.1 RefSeq:NP_565146.1
            RefSeq:NP_849896.1 RefSeq:NP_849897.1 UniGene:At.22030
            ProteinModelPortal:O49285 SMR:O49285 STRING:O49285 PRIDE:O49285
            EnsemblPlants:AT1G76990.1 EnsemblPlants:AT1G76990.2
            EnsemblPlants:AT1G76990.3 EnsemblPlants:AT1G76990.4
            EnsemblPlants:AT1G76990.5 GeneID:844035 KEGG:ath:AT1G76990
            TAIR:At1g76990 HOGENOM:HOG000239159 InParanoid:O49285 OMA:HNRRIAC
            PhylomeDB:O49285 ProtClustDB:CLSN2689253 ArrayExpress:O49285
            Genevestigator:O49285 Uniprot:O49285
        Length = 453

 Score = 98 (39.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
 Identities = 28/115 (24%), Positives = 54/115 (46%)

Query:    90 PHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFIT 149
             P V ID  S  + T+V++   ++ G L++ +  L DL L + K  ++++G      F +T
Sbjct:    23 PSVSIDNTSCKECTLVKVDSMNKPGILLEVVQVLTDLDLTITKAYISSDGGWFMDVFHVT 82

Query:   150 RLDTGRKVEDPDLLERIRLTIINNLLKYHPESSEQLAMGEAFGIKAPEKKLDVDI 204
                 G KV D   ++ I   ++    K H  +S+    G+  G+ +      ++I
Sbjct:    83 D-QQGNKVTDSKTIDYIE-KVLGP--KGHASASQNTWPGKRVGVHSLGDHTSIEI 133

 Score = 74 (31.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
 Identities = 13/24 (54%), Positives = 20/24 (83%)

Query:   226 DRPGLLVEIMKIIADVNVDVESAE 249
             DRPGLL E+  ++AD+N++V +AE
Sbjct:   137 DRPGLLSEVSAVLADLNINVVAAE 160

 Score = 70 (29.7 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
 Identities = 21/82 (25%), Positives = 40/82 (48%)

Query:   209 HVKEDGPKRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSY-GG 267
             H +E G   S++ +   DRP L+ +I+  + D+   V  A I + G  A  ++ + +  G
Sbjct:   258 HCEEKG--YSVINVSCEDRPKLMFDIVCTLTDMQYIVFHATISSSGSHASQEYFIRHKDG 315

Query:   268 AALNSS-LSQVLVNCLRYYLRR 288
               L++    + +V CL   + R
Sbjct:   316 CTLDTEGEKERVVKCLEAAIHR 337

 Score = 59 (25.8 bits), Expect = 0.00040, Sum P(2) = 0.00040
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query:   226 DRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHV 263
             DR GLL E+ +I+ +  + V  A + T G  A + F+V
Sbjct:   351 DRVGLLSEVTRILREHGLSVSRAGVTTVGEQAVNVFYV 388


>TIGR_CMR|SPO_0397 [details] [associations]
            symbol:SPO_0397 "protein-P-II uridylyltransferase"
            species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006464 "cellular
            protein modification process" evidence=ISS] [GO:0008773
            "[protein-PII] uridylyltransferase activity" evidence=ISS]
            InterPro:IPR002912 InterPro:IPR002934 InterPro:IPR003607
            InterPro:IPR006674 InterPro:IPR010043 InterPro:IPR013546
            Pfam:PF01842 Pfam:PF01909 Pfam:PF01966 Pfam:PF08335
            PIRSF:PIRSF006288 SMART:SM00471 EMBL:CP000031
            GenomeReviews:CP000031_GR GO:GO:0046872 GO:GO:0016597 GO:GO:0006807
            GO:GO:0008081 Gene3D:1.10.3210.10 eggNOG:COG2844 KO:K00990
            OMA:SPKVWNA GO:GO:0008773 HAMAP:MF_00277 PANTHER:PTHR13734:SF1
            TIGRFAMs:TIGR01693 RefSeq:YP_165660.1 ProteinModelPortal:Q5LWE5
            PRIDE:Q5LWE5 GeneID:3195406 KEGG:sil:SPO0397 PATRIC:23374055
            HOGENOM:HOG000261779 ProtClustDB:PRK05092 Uniprot:Q5LWE5
        Length = 908

 Score = 124 (48.7 bits), Expect = 0.00013, P = 0.00013
 Identities = 50/175 (28%), Positives = 79/175 (45%)

Query:    92 VLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDV--AKGTVNTEGSVKQTKFFIT 149
             + +D D + DAT    +  D  G       AL  +G +V  A+     +G V    F+I 
Sbjct:   707 IRLDPDEDRDATRACFAMADHPGIFSRMAGALALVGANVVDARSYTTKDGYVTDA-FWIQ 765

Query:   150 RLDTGRKVEDPDLLERIRLTIINNLLKYHPESSEQLAMGEAFGIKAPEKKLDVDIATHIH 209
               + G   E   L  R+   I+  L K    + + L   +   IK  EK  +V   THI 
Sbjct:   766 DAE-GHPYEAARL-PRLSQMILKTL-KGEVVARDALKSRDK--IKKREKAFNVP--THIT 818

Query:   210 VKEDGPK-RSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHV 263
                +G    +++ ++T DRPGLL ++ + +A  NV + +A I T G    D F+V
Sbjct:   819 FDNEGSDIYTIIEVDTRDRPGLLYDLARALAAANVYIANAVIATYGEQVVDSFYV 873


>TAIR|locus:2145482 [details] [associations]
            symbol:AT5G25320 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008152 "metabolic process"
            evidence=IEA] [GO:0016597 "amino acid binding" evidence=IEA]
            InterPro:IPR002912 Pfam:PF01842 EMBL:CP002688 GO:GO:0016597
            GO:GO:0008152 IPI:IPI00525640 RefSeq:NP_197914.1 UniGene:At.54991
            ProteinModelPortal:F4JWR0 PRIDE:F4JWR0 EnsemblPlants:AT5G25320.1
            GeneID:832604 KEGG:ath:AT5G25320 OMA:AIERRVC PhylomeDB:F4JWR0
            Uniprot:F4JWR0
        Length = 500

 Score = 101 (40.6 bits), Expect = 0.00030, Sum P(2) = 0.00030
 Identities = 23/85 (27%), Positives = 45/85 (52%)

Query:    86 YIPMPHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTK 145
             Y P   V ID DS  D T+V+++  ++ G L++ +  L D+ L + K  ++++G      
Sbjct:    21 YGPPCRVYIDNDSIQDCTVVKVNSENKQGLLLEVVQILTDMNLIITKSYISSDGGWFMDV 80

Query:   146 FFITRLDTGRKVEDPDLLERIRLTI 170
             F + + + G K+ D  ++  I+  I
Sbjct:    81 FHV-KDEHGNKLTDKSVINHIKHAI 104

 Score = 58 (25.5 bits), Expect = 0.00030, Sum P(2) = 0.00030
 Identities = 11/38 (28%), Positives = 25/38 (65%)

Query:   226 DRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHV 263
             +R GLL +I +++ +  + V  A+++T+G  + + F+V
Sbjct:   383 NRVGLLSDITRVLRENGLTVVRADVETQGQKSLNAFYV 420


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.136   0.384    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      296       277   0.00080  115 3  11 22  0.37    34
                                                     33  0.41    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  11
  No. of states in DFA:  572 (61 KB)
  Total size of DFA:  170 KB (2100 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  23.44u 0.07s 23.51t   Elapsed:  00:00:01
  Total cpu time:  23.44u 0.07s 23.51t   Elapsed:  00:00:01
  Start:  Tue May 21 04:12:19 2013   End:  Tue May 21 04:12:20 2013

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