Query 022480
Match_columns 296
No_of_seqs 135 out of 1382
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 06:09:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022480.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022480hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2nyi_A Unknown protein; protei 99.8 9.6E-19 3.3E-23 153.3 16.2 156 101-285 4-162 (195)
2 1u8s_A Glycine cleavage system 99.8 5.3E-17 1.8E-21 141.3 19.8 155 102-285 6-165 (192)
3 3p96_A Phosphoserine phosphata 99.0 4E-08 1.4E-12 94.0 20.0 138 101-264 11-149 (415)
4 2f06_A Conserved hypothetical 98.5 6.9E-06 2.4E-10 67.4 17.4 111 103-263 7-118 (144)
5 1zpv_A ACT domain protein; str 98.3 8.3E-06 2.8E-10 61.5 10.4 64 217-284 5-68 (91)
6 2nyi_A Unknown protein; protei 98.2 2E-06 7E-11 74.7 6.5 74 97-174 88-163 (195)
7 1zpv_A ACT domain protein; str 98.2 1.3E-05 4.6E-10 60.3 10.1 65 101-172 4-68 (91)
8 2ko1_A CTR148A, GTP pyrophosph 98.1 9.6E-06 3.3E-10 60.3 7.5 63 217-283 5-67 (88)
9 1u8s_A Glycine cleavage system 98.0 2.2E-05 7.4E-10 67.5 9.6 65 217-286 6-70 (192)
10 2ko1_A CTR148A, GTP pyrophosph 97.8 0.00015 5.2E-09 53.7 9.1 63 102-171 5-67 (88)
11 2re1_A Aspartokinase, alpha an 97.7 0.00068 2.3E-08 57.1 13.6 111 100-249 23-138 (167)
12 3o1l_A Formyltetrahydrofolate 97.4 0.00055 1.9E-08 63.5 10.0 66 101-172 21-88 (302)
13 2dtj_A Aspartokinase; protein- 97.4 0.0026 9E-08 54.1 12.7 111 100-249 13-130 (178)
14 3n0v_A Formyltetrahydrofolate 97.3 0.00094 3.2E-08 61.5 9.7 64 102-172 8-73 (286)
15 3obi_A Formyltetrahydrofolate 97.3 0.00089 3E-08 61.7 9.5 65 102-172 6-72 (288)
16 2f1f_A Acetolactate synthase i 97.3 0.00072 2.5E-08 57.4 7.9 65 217-286 3-69 (164)
17 3lou_A Formyltetrahydrofolate 97.3 0.00092 3.2E-08 61.7 9.2 39 101-139 9-47 (292)
18 3n0v_A Formyltetrahydrofolate 97.3 0.00032 1.1E-08 64.7 5.9 46 217-264 8-53 (286)
19 3nrb_A Formyltetrahydrofolate 97.2 0.0011 3.8E-08 61.0 8.7 39 101-139 6-44 (287)
20 3o1l_A Formyltetrahydrofolate 97.2 0.00052 1.8E-08 63.7 6.4 50 213-264 18-67 (302)
21 2dt9_A Aspartokinase; protein- 97.1 0.0048 1.6E-07 51.7 11.7 122 99-264 13-141 (167)
22 2jhe_A Transcription regulator 97.1 0.0019 6.4E-08 53.4 8.8 59 219-284 2-60 (190)
23 3lou_A Formyltetrahydrofolate 97.1 0.00051 1.8E-08 63.4 5.7 47 216-264 9-55 (292)
24 3nrb_A Formyltetrahydrofolate 97.1 0.00056 1.9E-08 63.0 5.9 47 216-264 6-52 (287)
25 2pc6_A Probable acetolactate s 97.1 0.0012 4.1E-08 56.1 7.1 66 217-287 4-71 (165)
26 3obi_A Formyltetrahydrofolate 97.0 0.0024 8.3E-08 58.8 9.5 46 217-264 6-51 (288)
27 2f1f_A Acetolactate synthase i 96.9 0.0035 1.2E-07 53.1 8.8 63 103-173 4-68 (164)
28 3p96_A Phosphoserine phosphata 96.8 0.0013 4.4E-08 62.6 5.6 40 216-255 11-50 (415)
29 2pc6_A Probable acetolactate s 96.6 0.0071 2.4E-07 51.3 8.3 63 103-173 5-69 (165)
30 2fgc_A Acetolactate synthase, 96.5 0.0065 2.2E-07 52.8 7.4 65 217-286 29-95 (193)
31 3s1t_A Aspartokinase; ACT doma 96.5 0.05 1.7E-06 46.4 13.0 110 101-249 15-131 (181)
32 1y7p_A Hypothetical protein AF 96.2 0.0077 2.6E-07 53.3 6.5 38 217-254 4-41 (223)
33 4go7_X Aspartokinase; transfer 96.1 0.027 9.2E-07 49.1 9.1 123 87-249 21-150 (200)
34 2fgc_A Acetolactate synthase, 96.0 0.027 9.4E-07 48.9 8.8 64 102-173 29-94 (193)
35 2jhe_A Transcription regulator 95.9 0.034 1.2E-06 45.6 8.7 59 104-172 2-60 (190)
36 3ab4_A Aspartokinase; aspartat 95.7 0.19 6.6E-06 48.1 14.3 110 101-249 263-379 (421)
37 1y7p_A Hypothetical protein AF 94.8 0.053 1.8E-06 47.9 6.7 38 102-139 4-41 (223)
38 2f06_A Conserved hypothetical 94.7 0.095 3.3E-06 42.3 7.5 36 217-252 6-41 (144)
39 3c1m_A Probable aspartokinase; 94.2 0.9 3.1E-05 44.1 14.6 117 100-248 316-438 (473)
40 1sc6_A PGDH, D-3-phosphoglycer 93.8 0.12 4.3E-06 49.4 7.5 49 216-264 330-378 (404)
41 2qmx_A Prephenate dehydratase; 93.5 0.23 7.8E-06 45.4 8.3 54 217-270 200-254 (283)
42 3l76_A Aspartokinase; alloster 93.2 0.86 2.9E-05 45.7 12.6 124 100-252 353-480 (600)
43 1ygy_A PGDH, D-3-phosphoglycer 93.1 0.33 1.1E-05 47.9 9.3 62 216-280 453-516 (529)
44 3l76_A Aspartokinase; alloster 93.0 1.4 4.7E-05 44.2 13.8 138 100-287 442-589 (600)
45 3luy_A Probable chorismate mut 92.9 0.69 2.4E-05 43.1 10.7 55 217-271 206-263 (329)
46 3mwb_A Prephenate dehydratase; 92.9 0.32 1.1E-05 45.1 8.4 54 216-269 200-255 (313)
47 2qmw_A PDT, prephenate dehydra 92.3 0.55 1.9E-05 42.5 9.0 51 216-266 185-239 (267)
48 3tvi_A Aspartokinase; structur 91.4 1.4 4.8E-05 42.7 11.2 107 101-249 297-409 (446)
49 1sc6_A PGDH, D-3-phosphoglycer 89.2 1.1 3.6E-05 42.9 8.2 48 101-148 330-377 (404)
50 1ygy_A PGDH, D-3-phosphoglycer 88.9 1.7 5.8E-05 42.7 9.7 41 100-140 452-492 (529)
51 3mtj_A Homoserine dehydrogenas 87.4 0.55 1.9E-05 45.6 4.9 35 216-250 358-392 (444)
52 3k5p_A D-3-phosphoglycerate de 87.2 2.8 9.5E-05 40.2 9.7 48 216-263 342-389 (416)
53 2cdq_A Aspartokinase; aspartat 86.8 3.9 0.00013 40.2 10.7 122 101-264 340-467 (510)
54 2re1_A Aspartokinase, alpha an 84.2 3.8 0.00013 33.7 8.0 33 100-132 101-136 (167)
55 1phz_A Protein (phenylalanine 83.6 1.8 6.3E-05 41.7 6.4 68 216-285 33-101 (429)
56 2qmx_A Prephenate dehydratase; 81.2 6.4 0.00022 35.7 8.9 52 102-155 200-252 (283)
57 2dtj_A Aspartokinase; protein- 81.1 3.2 0.00011 34.6 6.4 38 216-253 14-52 (178)
58 2dt9_A Aspartokinase; protein- 80.3 1.2 4.1E-05 36.8 3.4 50 216-265 15-68 (167)
59 3mah_A Aspartokinase; aspartat 79.5 1.5 5.1E-05 35.9 3.7 100 100-249 16-121 (157)
60 3luy_A Probable chorismate mut 78.2 21 0.00073 33.0 11.5 52 102-155 206-260 (329)
61 3k5p_A D-3-phosphoglycerate de 75.6 8.5 0.00029 36.8 8.3 54 87-142 330-383 (416)
62 4go7_X Aspartokinase; transfer 74.5 2.5 8.6E-05 36.5 3.9 50 216-265 34-87 (200)
63 3mwb_A Prephenate dehydratase; 74.4 12 0.00041 34.5 8.7 53 101-155 200-254 (313)
64 3mtj_A Homoserine dehydrogenas 68.5 9.6 0.00033 36.7 6.9 50 101-150 358-409 (444)
65 2qmw_A PDT, prephenate dehydra 66.8 27 0.00093 31.3 9.1 50 101-150 185-238 (267)
66 3s1t_A Aspartokinase; ACT doma 62.3 26 0.00089 29.2 7.6 35 100-134 94-131 (181)
67 3ab4_A Aspartokinase; aspartat 55.7 26 0.00087 33.1 7.2 50 216-265 263-316 (421)
68 3mah_A Aspartokinase; aspartat 47.3 12 0.00041 30.2 3.0 34 216-249 17-53 (157)
69 1rwu_A Hypothetical UPF0250 pr 44.4 1.1E+02 0.0036 23.6 8.8 64 100-171 34-100 (109)
70 1ib8_A Conserved protein SP14. 42.1 1.4E+02 0.0048 24.4 9.6 55 116-175 15-69 (164)
71 1phz_A Protein (phenylalanine 37.4 60 0.0021 31.1 6.5 51 100-150 32-83 (429)
72 2j0w_A Lysine-sensitive aspart 34.6 25 0.00087 33.7 3.5 107 100-248 306-418 (449)
73 3c1m_A Probable aspartokinase; 33.5 35 0.0012 32.8 4.3 48 216-265 317-367 (473)
74 4esb_A Transcriptional regulat 33.0 42 0.0014 25.7 3.9 65 227-292 41-108 (115)
75 3ced_A Methionine import ATP-b 30.9 1.6E+02 0.0055 21.7 8.7 39 228-267 34-72 (98)
76 2cdq_A Aspartokinase; aspartat 30.6 51 0.0017 32.2 4.9 34 216-249 340-376 (510)
77 3g12_A Putative lactoylglutath 30.2 1.4E+02 0.0048 22.1 6.6 50 100-157 65-115 (128)
78 1zhv_A Hypothetical protein AT 29.6 42 0.0014 26.9 3.5 32 217-248 62-96 (134)
79 3g12_A Putative lactoylglutath 28.7 1.6E+02 0.0054 21.8 6.7 48 216-270 66-115 (128)
80 3tvi_A Aspartokinase; structur 28.6 43 0.0015 32.1 3.9 64 216-287 297-364 (446)
81 3dhx_A Methionine import ATP-b 28.0 1.6E+02 0.0056 21.9 6.5 40 226-267 34-73 (106)
82 1tdj_A Biosynthetic threonine 27.3 3.9E+02 0.013 25.9 10.6 141 103-264 339-482 (514)
83 3dhx_A Methionine import ATP-b 25.7 2.1E+02 0.0071 21.3 7.0 36 114-150 36-71 (106)
84 2qsw_A Methionine import ATP-b 24.8 2.1E+02 0.007 20.9 7.4 40 227-267 36-75 (100)
85 1zvp_A Hypothetical protein VC 22.5 58 0.002 26.0 3.0 32 217-248 71-105 (133)
86 3f8b_A Transcriptional regulat 20.2 66 0.0023 24.5 2.8 65 227-292 46-113 (116)
No 1
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.80 E-value=9.6e-19 Score=153.32 Aligned_cols=156 Identities=15% Similarity=0.181 Sum_probs=113.5
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEeCCeEEEEEEEeecCCCCCCCChHHHHHHHHHHHHhhcccCCC
Q 022480 101 DATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLKYHPE 180 (296)
Q Consensus 101 ~~t~V~V~~~DrpGLLa~i~~vL~~~glnI~~A~I~T~~~~~~d~F~V~~~~~g~~l~~~~~l~~L~~~L~~~L~~~~~~ 180 (296)
..++|+|+|+|||||++.|+++|+++|+||++|++++..+++.-.|.+... +. ..+.+++.|++.|..++.+. +
T Consensus 4 ~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m~~~v~~~--~~--~~~~~~~~l~~~L~~~~~~~--~ 77 (195)
T 2nyi_A 4 QSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAMIVLVSLN--AK--DGKLIQSALESALPGFQIST--R 77 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEES--SS--SSHHHHHHHHHHSTTCEEEE--E
T ss_pred eEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEEEEEEEec--Cc--cchhHHHHHHHHHHHHHHhc--C
Confidence 457999999999999999999999999999999999999988657777653 21 22346677777766533221 0
Q ss_pred chhHhhhccccCccCCCccccccccceeeeccCCCCcEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecC--Ceee
Q 022480 181 SSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEG--LVAK 258 (296)
Q Consensus 181 ~~~~La~~~~~~~~~~~r~~~~~~~~~V~v~~~~~~~TvleV~t~DRPGLL~dIt~~La~~gv~I~~AkI~T~G--~ra~ 258 (296)
+ ....+ . .+ . ......++|+|.|+|||||+++|+++|+++|+||..++..|.+ +++.
T Consensus 78 ----~----~~~~~---~------~~--~--~~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~ 136 (195)
T 2nyi_A 78 ----R----ASSVA---E------RH--V--SPDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGF 136 (195)
T ss_dssp ----E----CCCC---------------C--CTTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTC
T ss_pred ----C----eEEEE---e------CC--c--CCCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCC
Confidence 0 00001 0 01 1 2223479999999999999999999999999999999999998 7889
Q ss_pred eEEEEEe-CCCCCChHHHHHHHHHHHHH
Q 022480 259 DKFHVSY-GGAALNSSLSQVLVNCLRYY 285 (296)
Q Consensus 259 D~F~V~~-~g~~L~~~~~~~L~~~L~~~ 285 (296)
+.|+++- -+.+ .... ++|+++|...
T Consensus 137 ~~F~m~~~~~~~-~~~~-~~l~~~l~~~ 162 (195)
T 2nyi_A 137 TLFRMGSRVAFP-FPLY-QEVVTALSRV 162 (195)
T ss_dssp EEEEEEEEEEEE-GGGH-HHHHHHHHHH
T ss_pred CeEEEEEEEEcC-CCcc-HHHHHHHHHH
Confidence 9999985 2222 1124 5666666543
No 2
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.76 E-value=5.3e-17 Score=141.25 Aligned_cols=155 Identities=13% Similarity=0.158 Sum_probs=109.7
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEeCCeEEEEEEEeecCCCCCCCChHHHHHHHHHHHHhhcccCCCc
Q 022480 102 ATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLKYHPES 181 (296)
Q Consensus 102 ~t~V~V~~~DrpGLLa~i~~vL~~~glnI~~A~I~T~~~~~~d~F~V~~~~~g~~l~~~~~l~~L~~~L~~~L~~~~~~~ 181 (296)
.++|+|+|+||||++++++++|+++|+||.++++++..+++.-+|.+..+ +..++.|++.|...+......
T Consensus 6 ~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~~~~v~~~--------~~~~~~l~~~L~~~~~~~~~~- 76 (192)
T 1u8s_A 6 HLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGS--------PSNITRVETTLPLLGQQHDLI- 76 (192)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEEC--------HHHHHHHHHHHHHHHHHHTCE-
T ss_pred EEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEEEEEEecC--------CCCHHHHHHHHHHHHHhcCCE-
Confidence 47899999999999999999999999999999999999988667777642 246788888887754321110
Q ss_pred hhHhhhccccCccCCCccccccccceeeeccCCCCcEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCC----ee
Q 022480 182 SEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGL----VA 257 (296)
Q Consensus 182 ~~~La~~~~~~~~~~~r~~~~~~~~~V~v~~~~~~~TvleV~t~DRPGLL~dIt~~La~~gv~I~~AkI~T~G~----ra 257 (296)
..+ + +. .+ ++ .......++|+|.|+||||+|++|+++|+++|+||.+++..|.++ +.
T Consensus 77 -~~~-----~--~~-~~------~~----~~~~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~ 137 (192)
T 1u8s_A 77 -TMM-----K--RT-SP------HD----HQTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSE 137 (192)
T ss_dssp -EEE-----E--EE-CC------CC----CCCCSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC-------
T ss_pred -EEE-----E--eC-CC------CC----CccCCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCC
Confidence 000 0 00 00 01 111224789999999999999999999999999999999999984 68
Q ss_pred eeEEEEEe-CCCCCChHHHHHHHHHHHHH
Q 022480 258 KDKFHVSY-GGAALNSSLSQVLVNCLRYY 285 (296)
Q Consensus 258 ~D~F~V~~-~g~~L~~~~~~~L~~~L~~~ 285 (296)
.+.|+++- -+.+ .....++|+++|...
T Consensus 138 ~~~F~~~~~~~~~-~~~~~~~l~~~l~~~ 165 (192)
T 1u8s_A 138 QNQFHIAISARVD-SGCNLMQLQEEFDAL 165 (192)
T ss_dssp -CEEEEEEEEEEC-TTSCHHHHHHHHHHH
T ss_pred CCEEEEEEEEeCC-CCCCHHHHHHHHHHH
Confidence 99999984 2211 111345566666543
No 3
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.97 E-value=4e-08 Score=94.02 Aligned_cols=138 Identities=8% Similarity=0.056 Sum_probs=92.6
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEeCCeEEEEEEEeecCCCCCCCChHHHHHHHHHHHHhhcccCCC
Q 022480 101 DATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLKYHPE 180 (296)
Q Consensus 101 ~~t~V~V~~~DrpGLLa~i~~vL~~~glnI~~A~I~T~~~~~~d~F~V~~~~~g~~l~~~~~l~~L~~~L~~~L~~~~~~ 180 (296)
...+|+|.|+||||+++.|+++|+++|+||.+...+..++.|.-...+.-+ .+. ...+.|++.|.. +.. ..+
T Consensus 11 ~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~~f~~~~~~~~~-~~~-----~~~~~l~~~l~~-~~~-~~~ 82 (415)
T 3p96_A 11 VSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRHRLTLGVLVCCP-ADV-----ADGPALRHDVEA-AIR-KVG 82 (415)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETTEEEEEEEEEEC-HHH-----HTSHHHHHHHHH-HHH-HTT
T ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECCEeEEEEEEEec-CCc-----CCHHHHHHHHHH-HHH-HcC
Confidence 457899999999999999999999999999999999998877433333321 110 022567777765 322 111
Q ss_pred chhHhhhccccCccCCCccccccccceeeeccCCCCcEEEEEEeCC-CcchHHHHHHHHHhCCceEEEEEEEecCCeeee
Q 022480 181 SSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETAD-RPGLLVEIMKIIADVNVDVESAEIDTEGLVAKD 259 (296)
Q Consensus 181 ~~~~La~~~~~~~~~~~r~~~~~~~~~V~v~~~~~~~TvleV~t~D-RPGLL~dIt~~La~~gv~I~~AkI~T~G~ra~D 259 (296)
+.-.+ .... ...+ .....++++++.+.| +||++.+|+.+|+++|+||...+.-+......=
T Consensus 83 ~~~~~--------~~~~------~~~~----~~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~~~~~~~ 144 (415)
T 3p96_A 83 LDVSI--------ERSD------DVPI----IREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSDYPVIGL 144 (415)
T ss_dssp CEEEE--------EECS------SSCS----SCCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEESSSSEEE
T ss_pred eEEEE--------EECC------cccc----cCCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccCCCceEE
Confidence 11000 0000 0000 122358999999999 999999999999999999999988773332322
Q ss_pred EEEEE
Q 022480 260 KFHVS 264 (296)
Q Consensus 260 ~F~V~ 264 (296)
.|++.
T Consensus 145 ~~~v~ 149 (415)
T 3p96_A 145 ELRVS 149 (415)
T ss_dssp EEEEE
T ss_pred EEEee
Confidence 36664
No 4
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.54 E-value=6.9e-06 Score=67.39 Aligned_cols=111 Identities=12% Similarity=0.180 Sum_probs=75.6
Q ss_pred EEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEeCC-eEEEEEEEeecCCCCCCCChHHHHHHHHHHHHhhcccCCCc
Q 022480 103 TIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGS-VKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLKYHPES 181 (296)
Q Consensus 103 t~V~V~~~DrpGLLa~i~~vL~~~glnI~~A~I~T~~~-~~~d~F~V~~~~~g~~l~~~~~l~~L~~~L~~~L~~~~~~~ 181 (296)
..++|..+|+||.++++++.|++.|+||..-.+....+ ++ -.|.+. ++ ++.++.|.+ . + .
T Consensus 7 ~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~~-~~~~~~---------d~---~~a~~~L~~-~-G--~-- 67 (144)
T 2f06_A 7 KQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADFGI-LRGIVS---------DP---DKAYKALKD-N-H--F-- 67 (144)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCEE-EEEEES---------CH---HHHHHHHHH-T-T--C--
T ss_pred EEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCCE-EEEEeC---------CH---HHHHHHHHH-c-C--C--
Confidence 57888999999999999999999999999887765544 32 123321 12 223333332 1 1 0
Q ss_pred hhHhhhccccCccCCCccccccccceeeeccCCCCcEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEE
Q 022480 182 SEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKF 261 (296)
Q Consensus 182 ~~~La~~~~~~~~~~~r~~~~~~~~~V~v~~~~~~~TvleV~t~DRPGLL~dIt~~La~~gv~I~~AkI~T~G~ra~D~F 261 (296)
.. . ...++-+..+|+||.+++|+++|++.|+||.+......+.+..=.|
T Consensus 68 ---------------------~v----~------~~svv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~~~~~~~~~i 116 (144)
T 2f06_A 68 ---------------------AV----N------ITDVVGISCPNVPGALAKVLGFLSAEGVFIEYMYSFANNNVANVVI 116 (144)
T ss_dssp ---------------------CE----E------EEEEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEE
T ss_pred ---------------------eE----e------eeeEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEccCCcEEEEE
Confidence 00 0 0156777889999999999999999999998877653344544444
Q ss_pred EE
Q 022480 262 HV 263 (296)
Q Consensus 262 ~V 263 (296)
.+
T Consensus 117 ~~ 118 (144)
T 2f06_A 117 RP 118 (144)
T ss_dssp EE
T ss_pred Ee
Confidence 44
No 5
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.26 E-value=8.3e-06 Score=61.46 Aligned_cols=64 Identities=13% Similarity=0.122 Sum_probs=46.9
Q ss_pred cEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEEEeCCCCCChHHHHHHHHHHHH
Q 022480 217 RSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGGAALNSSLSQVLVNCLRY 284 (296)
Q Consensus 217 ~TvleV~t~DRPGLL~dIt~~La~~gv~I~~AkI~T~G~ra~D~F~V~~~g~~L~~~~~~~L~~~L~~ 284 (296)
.+.|.|.++||||+|++|+++|+++|+||......+.++...-.+.+.-.+.. ..++|.+.|+.
T Consensus 5 ~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~~~~~----~l~~l~~~L~~ 68 (91)
T 1zpv_A 5 KAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSDEKQ----DFTYLRNEFEA 68 (91)
T ss_dssp EEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEESSCC----CHHHHHHHHHH
T ss_pred eEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEeCCCC----CHHHHHHHHHH
Confidence 57899999999999999999999999999999998876544444444223311 24555565554
No 6
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=98.19 E-value=2e-06 Score=74.66 Aligned_cols=74 Identities=11% Similarity=0.004 Sum_probs=54.1
Q ss_pred cCCCCeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEeC--CeEEEEEEEeecCCCCCCCChHHHHHHHHHHHHhh
Q 022480 97 DSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEG--SVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNL 174 (296)
Q Consensus 97 ~~~~~~t~V~V~~~DrpGLLa~i~~vL~~~glnI~~A~I~T~~--~~~~d~F~V~~~~~g~~l~~~~~l~~L~~~L~~~L 174 (296)
......++|+|.|+||||+++.|+++|+++|+||.+++.++.+ +...+.|++... -+.+ ++.. +.|++.|....
T Consensus 88 ~~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~-~~~~--~~~~-~~l~~~l~~~a 163 (195)
T 2nyi_A 88 SPDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSR-VAFP--FPLY-QEVVTALSRVE 163 (195)
T ss_dssp CTTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEE-EEEE--GGGH-HHHHHHHHHHH
T ss_pred CCCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEEE-EEcC--CCcc-HHHHHHHHHHH
Confidence 3444668999999999999999999999999999999999987 323355555442 2211 1234 77887777643
No 7
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.18 E-value=1.3e-05 Score=60.27 Aligned_cols=65 Identities=11% Similarity=0.096 Sum_probs=50.4
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEeCCeEEEEEEEeecCCCCCCCChHHHHHHHHHHHH
Q 022480 101 DATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIIN 172 (296)
Q Consensus 101 ~~t~V~V~~~DrpGLLa~i~~vL~~~glnI~~A~I~T~~~~~~d~F~V~~~~~g~~l~~~~~l~~L~~~L~~ 172 (296)
....|+|.++||||++++++++|+++|+||.+....+..+.+.-.+.+.-+ +. ..++.|.+.|..
T Consensus 4 ~~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~~-~~------~~l~~l~~~L~~ 68 (91)
T 1zpv_A 4 MKAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSD-EK------QDFTYLRNEFEA 68 (91)
T ss_dssp EEEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEES-SC------CCHHHHHHHHHH
T ss_pred ceEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEeC-CC------CCHHHHHHHHHH
Confidence 346899999999999999999999999999999999887655555555432 21 234667777765
No 8
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=98.09 E-value=9.6e-06 Score=60.33 Aligned_cols=63 Identities=13% Similarity=0.214 Sum_probs=47.5
Q ss_pred cEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEEEeCCCCCChHHHHHHHHHHH
Q 022480 217 RSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGGAALNSSLSQVLVNCLR 283 (296)
Q Consensus 217 ~TvleV~t~DRPGLL~dIt~~La~~gv~I~~AkI~T~G~ra~D~F~V~~~g~~L~~~~~~~L~~~L~ 283 (296)
.+.|.|.+.||||+|++|+++|+++|+||.++...+.++.+...|.+.-.+ ....+++.++|+
T Consensus 5 ~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~~~~~~i~v~~~~----~~~l~~l~~~L~ 67 (88)
T 2ko1_A 5 LAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIFVKN----TDKLTTLMDKLR 67 (88)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECSSEEEEEEEEEESS----HHHHHHHHHHHT
T ss_pred EEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcCCEEEEEEEEEECC----HHHHHHHHHHHh
Confidence 578999999999999999999999999999999988766555555553221 224455555554
No 9
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=98.03 E-value=2.2e-05 Score=67.55 Aligned_cols=65 Identities=15% Similarity=0.174 Sum_probs=50.3
Q ss_pred cEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEEEeCCCCCChHHHHHHHHHHHHHc
Q 022480 217 RSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGGAALNSSLSQVLVNCLRYYL 286 (296)
Q Consensus 217 ~TvleV~t~DRPGLL~dIt~~La~~gv~I~~AkI~T~G~ra~D~F~V~~~g~~L~~~~~~~L~~~L~~~l 286 (296)
.++|.|.|+|||||+++|+.+|+++|+||..+++.+.++.-.-.|.+... ....++|++.|....
T Consensus 6 ~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~~~~v~~~-----~~~~~~l~~~L~~~~ 70 (192)
T 1u8s_A 6 HLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGS-----PSNITRVETTLPLLG 70 (192)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEEC-----HHHHHHHHHHHHHHH
T ss_pred EEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEEEEEEecC-----CCCHHHHHHHHHHHH
Confidence 57899999999999999999999999999999998866654446666432 124566777666543
No 10
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.76 E-value=0.00015 Score=53.68 Aligned_cols=63 Identities=10% Similarity=0.117 Sum_probs=46.4
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEeCCeEEEEEEEeecCCCCCCCChHHHHHHHHHHH
Q 022480 102 ATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTII 171 (296)
Q Consensus 102 ~t~V~V~~~DrpGLLa~i~~vL~~~glnI~~A~I~T~~~~~~d~F~V~~~~~g~~l~~~~~l~~L~~~L~ 171 (296)
.+.|.|.+.||||+|++|+++|++.|+||.+..+.+.++.+...|.+.-. +.+.++.+.+.|.
T Consensus 5 ~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~~~~~~i~v~~~-------~~~~l~~l~~~L~ 67 (88)
T 2ko1_A 5 LAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIFVK-------NTDKLTTLMDKLR 67 (88)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECSSEEEEEEEEEES-------SHHHHHHHHHHHT
T ss_pred EEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcCCEEEEEEEEEEC-------CHHHHHHHHHHHh
Confidence 35788999999999999999999999999999998876633344444331 2345555555544
No 11
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.72 E-value=0.00068 Score=57.07 Aligned_cols=111 Identities=12% Similarity=0.178 Sum_probs=72.6
Q ss_pred CCeEEEEEE-eCCCccHHHHHHHHHHHCCceEEEEEEEEeCCeE-EEEEEEeecCCCCCCCChHHHHHHHHHHHHhhccc
Q 022480 100 SDATIVQLS-FGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVK-QTKFFITRLDTGRKVEDPDLLERIRLTIINNLLKY 177 (296)
Q Consensus 100 ~~~t~V~V~-~~DrpGLLa~i~~vL~~~glnI~~A~I~T~~~~~-~d~F~V~~~~~g~~l~~~~~l~~L~~~L~~~L~~~ 177 (296)
.+...|+|. .+|+||.++++.++|+++|+||..-......++. .-.|.|... ..++..+.|.+.. .
T Consensus 23 ~~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~~g~~~isf~v~~~----------~~~~a~~~l~~~~-~- 90 (167)
T 2re1_A 23 KNQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRG----------DYKQTLEILSERQ-D- 90 (167)
T ss_dssp CCCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC----CEEEEEEEECGG----------GHHHHHHHHHHSS-T-
T ss_pred CCEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCCCCeeEEEEEEech----------HHHHHHHHHHHHH-H-
Confidence 355788888 4999999999999999999999876654332332 234655431 1133334444321 1
Q ss_pred CCCchhHhhhccccCccCCCccccccccceeeeccCCCCcEEEEEEeCC---CcchHHHHHHHHHhCCceEEEEE
Q 022480 178 HPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETAD---RPGLLVEIMKIIADVNVDVESAE 249 (296)
Q Consensus 178 ~~~~~~~La~~~~~~~~~~~r~~~~~~~~~V~v~~~~~~~TvleV~t~D---RPGLL~dIt~~La~~gv~I~~Ak 249 (296)
+ + + + ..|.+. .+.+.+.|.+.+ +||+++++.++|++.||||.+..
T Consensus 91 --~----l------~---------~---~~i~~~---~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~is 138 (167)
T 2re1_A 91 --S----I------G---------A---ASIDGD---DTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMIS 138 (167)
T ss_dssp --T----T------T---------C---SEEEEE---SSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCEEE
T ss_pred --H----c------C---------C---ceEEec---CCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEEEE
Confidence 0 0 0 0 012222 246889999887 99999999999999999999943
No 12
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.45 E-value=0.00055 Score=63.54 Aligned_cols=66 Identities=14% Similarity=0.059 Sum_probs=47.4
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEe--CCeEEEEEEEeecCCCCCCCChHHHHHHHHHHHH
Q 022480 101 DATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTE--GSVKQTKFFITRLDTGRKVEDPDLLERIRLTIIN 172 (296)
Q Consensus 101 ~~t~V~V~~~DrpGLLa~i~~vL~~~glnI~~A~I~T~--~~~~~d~F~V~~~~~g~~l~~~~~l~~L~~~L~~ 172 (296)
...+++|.|+||||+++.|+++|+++|+||.+++.++. .+.|.-...+..+ .+ .. ..+.|++.|..
T Consensus 21 ~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~-~~-~~----~~~~L~~~l~~ 88 (302)
T 3o1l_A 21 RTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRAD-TL-PF----DLDGFREAFTP 88 (302)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGG-GS-SS----CHHHHHHHHHH
T ss_pred ceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecC-CC-CC----CHHHHHHHHHH
Confidence 44789999999999999999999999999999999987 3455323333221 11 11 24666666654
No 13
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=97.38 E-value=0.0026 Score=54.07 Aligned_cols=111 Identities=20% Similarity=0.258 Sum_probs=72.2
Q ss_pred CCeEEEEE-EeCCCccHHHHHHHHHHHCCceEEEEEEEEeC--C-eEEEEEEEeecCCCCCCCChHHHHHHHHHHHHhhc
Q 022480 100 SDATIVQL-SFGDRLGALIDTMNALKDLGLDVAKGTVNTEG--S-VKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLL 175 (296)
Q Consensus 100 ~~~t~V~V-~~~DrpGLLa~i~~vL~~~glnI~~A~I~T~~--~-~~~d~F~V~~~~~g~~l~~~~~l~~L~~~L~~~L~ 175 (296)
.+.+.|+| ..+|+||.++++.+.|+++|+||..-...+.. + ..--.|.+.. +..++..+.|.+ +.
T Consensus 13 ~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~----------~d~~~a~~~l~~-~~ 81 (178)
T 2dtj_A 13 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPR----------SDGRRAMEILKK-LQ 81 (178)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEH----------HHHHHHHHHHHT-TT
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEcc----------ccHHHHHHHHHH-HH
Confidence 45677777 46999999999999999999999876554431 2 2222255543 222333334433 11
Q ss_pred ccCCCchhHhhhccccCccCCCccccccccceeeeccCCCCcEEEEEEeC---CCcchHHHHHHHHHhCCceEEEEE
Q 022480 176 KYHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETA---DRPGLLVEIMKIIADVNVDVESAE 249 (296)
Q Consensus 176 ~~~~~~~~~La~~~~~~~~~~~r~~~~~~~~~V~v~~~~~~~TvleV~t~---DRPGLL~dIt~~La~~gv~I~~Ak 249 (296)
. + + + + ..+.+.+ +.+.|.|.+. ++||+++++.++|++.||||.+..
T Consensus 82 ~---~----~------~---------~---~~v~~~~---~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~is 130 (178)
T 2dtj_A 82 V---Q----G------N---------W---TNVLYDD---QVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELIS 130 (178)
T ss_dssp T---T----T------T---------C---SEEEEES---CEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred H---h----c------C---------C---CeEEEeC---CeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEEEE
Confidence 1 0 0 0 0 1122222 4678888876 999999999999999999999953
No 14
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.31 E-value=0.00094 Score=61.47 Aligned_cols=64 Identities=9% Similarity=-0.076 Sum_probs=46.4
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEeC--CeEEEEEEEeecCCCCCCCChHHHHHHHHHHHH
Q 022480 102 ATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEG--SVKQTKFFITRLDTGRKVEDPDLLERIRLTIIN 172 (296)
Q Consensus 102 ~t~V~V~~~DrpGLLa~i~~vL~~~glnI~~A~I~T~~--~~~~d~F~V~~~~~g~~l~~~~~l~~L~~~L~~ 172 (296)
..+|+|.|+||||+++.+++.|+++|+||.+.+.++.. +.|.-...+..+ .+ ...+.|++.|..
T Consensus 8 ~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~-~~------~~~~~L~~~f~~ 73 (286)
T 3n0v_A 8 TWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQP-DD------FDEAGFRAGLAE 73 (286)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECC-SS------CCHHHHHHHHHH
T ss_pred cEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecC-CC------CCHHHHHHHHHH
Confidence 47899999999999999999999999999999999643 444322223221 11 124667777765
No 15
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.30 E-value=0.00089 Score=61.69 Aligned_cols=65 Identities=14% Similarity=0.121 Sum_probs=46.3
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEeC--CeEEEEEEEeecCCCCCCCChHHHHHHHHHHHH
Q 022480 102 ATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEG--SVKQTKFFITRLDTGRKVEDPDLLERIRLTIIN 172 (296)
Q Consensus 102 ~t~V~V~~~DrpGLLa~i~~vL~~~glnI~~A~I~T~~--~~~~d~F~V~~~~~g~~l~~~~~l~~L~~~L~~ 172 (296)
..+++|.|+||||+++.++++|+++|+||.+.+.++.. +.|.-...+.-+ ++ .. ..+.|++.|..
T Consensus 6 ~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~-~~-~~----~~~~L~~~f~~ 72 (288)
T 3obi_A 6 QYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAA-AK-VI----PLASLRTGFGV 72 (288)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEES-SC-CC----CHHHHHHHHHH
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcC-CC-CC----CHHHHHHHHHH
Confidence 46899999999999999999999999999999998543 344322333322 22 11 23666766655
No 16
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=97.28 E-value=0.00072 Score=57.42 Aligned_cols=65 Identities=12% Similarity=0.274 Sum_probs=50.3
Q ss_pred cEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecC--CeeeeEEEEEeCCCCCChHHHHHHHHHHHHHc
Q 022480 217 RSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEG--LVAKDKFHVSYGGAALNSSLSQVLVNCLRYYL 286 (296)
Q Consensus 217 ~TvleV~t~DRPGLL~dIt~~La~~gv~I~~AkI~T~G--~ra~D~F~V~~~g~~L~~~~~~~L~~~L~~~l 286 (296)
...|.|...||||+|++|+.+|+++|+||.++.+.+.. +...=.|.+. |. +...++|.+.|.+..
T Consensus 3 ~~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~--~d---~~~leqI~kqL~Kl~ 69 (164)
T 2f1f_A 3 RRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTV--GD---EKVLEQIEKQLHKLV 69 (164)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEE--SC---HHHHHHHHHHHHHST
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEe--cc---HHHHHHHHHHHcCCC
Confidence 36789999999999999999999999999999996433 3444455664 32 446788888888654
No 17
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.27 E-value=0.00092 Score=61.72 Aligned_cols=39 Identities=18% Similarity=0.137 Sum_probs=35.7
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEeC
Q 022480 101 DATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEG 139 (296)
Q Consensus 101 ~~t~V~V~~~DrpGLLa~i~~vL~~~glnI~~A~I~T~~ 139 (296)
...+++|.|+||||+++.|+++|+++|+||.+.+.++..
T Consensus 9 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~ 47 (292)
T 3lou_A 9 HQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDD 47 (292)
T ss_dssp CEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEET
T ss_pred CcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecC
Confidence 457899999999999999999999999999999999643
No 18
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.26 E-value=0.00032 Score=64.66 Aligned_cols=46 Identities=9% Similarity=0.115 Sum_probs=39.0
Q ss_pred cEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEEE
Q 022480 217 RSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 264 (296)
Q Consensus 217 ~TvleV~t~DRPGLL~dIt~~La~~gv~I~~AkI~T~G~ra~D~F~V~ 264 (296)
.++|+|.|+|||||++.|+++|+++|+||....-.+. ...+.|+.+
T Consensus 8 ~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d--~~~g~Ffmr 53 (286)
T 3n0v_A 8 TWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDD--RQSGRFFIR 53 (286)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEE--TTTTEEEEE
T ss_pred cEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeecc--CCCCeeEEE
Confidence 5899999999999999999999999999999887653 334567765
No 19
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.18 E-value=0.0011 Score=61.04 Aligned_cols=39 Identities=13% Similarity=0.221 Sum_probs=35.7
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEeC
Q 022480 101 DATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEG 139 (296)
Q Consensus 101 ~~t~V~V~~~DrpGLLa~i~~vL~~~glnI~~A~I~T~~ 139 (296)
...+++|.|+||||+++.+++.|+++|+||.+.+.++..
T Consensus 6 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~ 44 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDE 44 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEET
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecC
Confidence 457899999999999999999999999999999998543
No 20
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.17 E-value=0.00052 Score=63.72 Aligned_cols=50 Identities=20% Similarity=0.297 Sum_probs=40.9
Q ss_pred CCCCcEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEEE
Q 022480 213 DGPKRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 264 (296)
Q Consensus 213 ~~~~~TvleV~t~DRPGLL~dIt~~La~~gv~I~~AkI~T~G~ra~D~F~V~ 264 (296)
.+...++|+|.|+|||||++.|+++|+++|+||....-.+.. ..+.|+.+
T Consensus 18 ~~~~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~--~~g~FfMr 67 (302)
T 3o1l_A 18 QGMRTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDN--LSGWFFMR 67 (302)
T ss_dssp CCCCEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEET--TTTEEEEE
T ss_pred cccceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecC--CCCeEEEE
Confidence 344578999999999999999999999999999998876542 23457765
No 21
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=97.15 E-value=0.0048 Score=51.74 Aligned_cols=122 Identities=16% Similarity=0.201 Sum_probs=76.6
Q ss_pred CCCeEEEEEEe-CCCccHHHHHHHHHHHCCceEEEEEEEEeC--CeE-EEEEEEeecCCCCCCCChHHHHHHHHHHHHhh
Q 022480 99 NSDATIVQLSF-GDRLGALIDTMNALKDLGLDVAKGTVNTEG--SVK-QTKFFITRLDTGRKVEDPDLLERIRLTIINNL 174 (296)
Q Consensus 99 ~~~~t~V~V~~-~DrpGLLa~i~~vL~~~glnI~~A~I~T~~--~~~-~d~F~V~~~~~g~~l~~~~~l~~L~~~L~~~L 174 (296)
..+.+.|+|.+ +|+||.++++.++|+++|+||..-...... .+. --.|.|... ..++..+.|.+..
T Consensus 13 ~~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~~----------d~~~a~~~L~~~~ 82 (167)
T 2dt9_A 13 DLDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKD----------FAQEALEALEPVL 82 (167)
T ss_dssp ECSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEGG----------GHHHHHHHHHHHH
T ss_pred eCCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEehH----------HHHHHHHHHHHHH
Confidence 34667777776 899999999999999999999875443221 222 234666432 1122233333311
Q ss_pred cccCCCchhHhhhccccCccCCCccccccccceeeeccCCCCcEEEEEEeCC---CcchHHHHHHHHHhCCceEEEEEEE
Q 022480 175 LKYHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETAD---RPGLLVEIMKIIADVNVDVESAEID 251 (296)
Q Consensus 175 ~~~~~~~~~~La~~~~~~~~~~~r~~~~~~~~~V~v~~~~~~~TvleV~t~D---RPGLL~dIt~~La~~gv~I~~AkI~ 251 (296)
. .+ .. .+.+. .+.+.+.|.+.+ +||.++++.++|++.||||....
T Consensus 83 ~--------~~-----------------~~--~v~~~---~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~is-- 130 (167)
T 2dt9_A 83 A--------EI-----------------GG--EAILR---PDIAKVSIVGVGLASTPEVPAKMFQAVASTGANIEMIA-- 130 (167)
T ss_dssp H--------HH-----------------CC--EEEEE---CSEEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCEEE--
T ss_pred H--------Hh-----------------CC--cEEEe---CCEEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEEEE--
Confidence 1 01 00 12222 246888999886 99999999999999999996553
Q ss_pred ecCCeeeeEEEEE
Q 022480 252 TEGLVAKDKFHVS 264 (296)
Q Consensus 252 T~G~ra~D~F~V~ 264 (296)
|- +. .=.|.|.
T Consensus 131 ~S-e~-~is~vv~ 141 (167)
T 2dt9_A 131 TS-EV-RISVIIP 141 (167)
T ss_dssp EC-SS-EEEEEEE
T ss_pred cc-CC-EEEEEEe
Confidence 32 22 3445564
No 22
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=97.12 E-value=0.0019 Score=53.41 Aligned_cols=59 Identities=24% Similarity=0.321 Sum_probs=43.5
Q ss_pred EEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEEEeCCCCCChHHHHHHHHHHHH
Q 022480 219 LLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGGAALNSSLSQVLVNCLRY 284 (296)
Q Consensus 219 vleV~t~DRPGLL~dIt~~La~~gv~I~~AkI~T~G~ra~D~F~V~~~g~~L~~~~~~~L~~~L~~ 284 (296)
.|+|.|.||+|||++|+++|+++++||..+.+.+.|. +++.-.. ........|...+..
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~g~-----i~~~~~~--~~~~~~~~L~~~l~~ 60 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPIGR-----IYLNFAE--LEFESFSSLMAEIRR 60 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETTTE-----EEEEECC--CCHHHHHHHHHHHHH
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecCCE-----EEEEEEe--CCHHHHHHHHHHHHc
Confidence 4789999999999999999999999999999987632 4443221 123345566665554
No 23
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.11 E-value=0.00051 Score=63.44 Aligned_cols=47 Identities=11% Similarity=0.229 Sum_probs=39.1
Q ss_pred CcEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEEE
Q 022480 216 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 264 (296)
Q Consensus 216 ~~TvleV~t~DRPGLL~dIt~~La~~gv~I~~AkI~T~G~ra~D~F~V~ 264 (296)
..++|+|.|+|||||+++|+++|+++|+||....-.+. ...+.|+.+
T Consensus 9 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d--~~~g~Ffmr 55 (292)
T 3lou_A 9 HQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDD--DLSARFFVR 55 (292)
T ss_dssp CEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEE--TTTTEEEEE
T ss_pred CcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEec--CCCCceEEE
Confidence 35899999999999999999999999999999887653 234456665
No 24
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.10 E-value=0.00056 Score=63.03 Aligned_cols=47 Identities=19% Similarity=0.323 Sum_probs=39.1
Q ss_pred CcEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEEE
Q 022480 216 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 264 (296)
Q Consensus 216 ~~TvleV~t~DRPGLL~dIt~~La~~gv~I~~AkI~T~G~ra~D~F~V~ 264 (296)
..++|+|.|+|||||++.|+++|+++|+||....-.+ ....+.|+.+
T Consensus 6 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~--d~~~g~Ffmr 52 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFN--DEDSSKFFMR 52 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEE--ETTTTEEEEE
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeee--cCCCCeEEEE
Confidence 3589999999999999999999999999999887753 2234567775
No 25
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=97.06 E-value=0.0012 Score=56.14 Aligned_cols=66 Identities=12% Similarity=0.234 Sum_probs=50.8
Q ss_pred cEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEE-ec-CCeeeeEEEEEeCCCCCChHHHHHHHHHHHHHcC
Q 022480 217 RSLLYIETADRPGLLVEIMKIIADVNVDVESAEID-TE-GLVAKDKFHVSYGGAALNSSLSQVLVNCLRYYLR 287 (296)
Q Consensus 217 ~TvleV~t~DRPGLL~dIt~~La~~gv~I~~AkI~-T~-G~ra~D~F~V~~~g~~L~~~~~~~L~~~L~~~l~ 287 (296)
...|.|...||||+|++|+.+|+++|+||.++.+. |. .+...=.|.+..+ +...++|.+.|.+..+
T Consensus 4 ~~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~d-----~~~leql~kQL~Kl~d 71 (165)
T 2pc6_A 4 RHIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNGP-----DEIVEQITKQLNKLIE 71 (165)
T ss_dssp EEEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEEC-----HHHHHHHHHHHHHSTT
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEecc-----HHHHHHHHHHhcCCCC
Confidence 46789999999999999999999999999999996 44 2445545566422 4467888888886543
No 26
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.04 E-value=0.0024 Score=58.76 Aligned_cols=46 Identities=13% Similarity=0.317 Sum_probs=37.9
Q ss_pred cEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEEE
Q 022480 217 RSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 264 (296)
Q Consensus 217 ~TvleV~t~DRPGLL~dIt~~La~~gv~I~~AkI~T~G~ra~D~F~V~ 264 (296)
.++|+|.|+|||||++.|+++|+++|+||....-.+. ...+.|+.+
T Consensus 6 ~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d--~~~g~Ffmr 51 (288)
T 3obi_A 6 QYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYND--TESGHFFMR 51 (288)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEE--TTTTEEEEE
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeec--CCCCceEEE
Confidence 4789999999999999999999999999999887542 233456665
No 27
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=96.93 E-value=0.0035 Score=53.15 Aligned_cols=63 Identities=17% Similarity=0.222 Sum_probs=50.0
Q ss_pred EEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEeCC-eEE-EEEEEeecCCCCCCCChHHHHHHHHHHHHh
Q 022480 103 TIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGS-VKQ-TKFFITRLDTGRKVEDPDLLERIRLTIINN 173 (296)
Q Consensus 103 t~V~V~~~DrpGLLa~i~~vL~~~glnI~~A~I~T~~~-~~~-d~F~V~~~~~g~~l~~~~~l~~L~~~L~~~ 173 (296)
..+.|.+.|+||+|++++++|++.|+||.+..+....+ +.. -+|.+. . ++..++.|.+.|...
T Consensus 4 ~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~-~-------d~~~leqI~kqL~Kl 68 (164)
T 2f1f_A 4 RILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTV-G-------DEKVLEQIEKQLHKL 68 (164)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEE-S-------CHHHHHHHHHHHHHS
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEe-c-------cHHHHHHHHHHHcCC
Confidence 57899999999999999999999999999999987764 443 345553 2 246778888888763
No 28
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=96.79 E-value=0.0013 Score=62.56 Aligned_cols=40 Identities=15% Similarity=0.292 Sum_probs=36.5
Q ss_pred CcEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCC
Q 022480 216 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGL 255 (296)
Q Consensus 216 ~~TvleV~t~DRPGLL~dIt~~La~~gv~I~~AkI~T~G~ 255 (296)
...+|+|.|+|||||++.|+++|+++|+||....-.+.++
T Consensus 11 ~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~ 50 (415)
T 3p96_A 11 VSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRH 50 (415)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETT
T ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECC
Confidence 3689999999999999999999999999999999877665
No 29
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=96.60 E-value=0.0071 Score=51.30 Aligned_cols=63 Identities=14% Similarity=0.219 Sum_probs=49.8
Q ss_pred EEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEeCC-eEE-EEEEEeecCCCCCCCChHHHHHHHHHHHHh
Q 022480 103 TIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGS-VKQ-TKFFITRLDTGRKVEDPDLLERIRLTIINN 173 (296)
Q Consensus 103 t~V~V~~~DrpGLLa~i~~vL~~~glnI~~A~I~T~~~-~~~-d~F~V~~~~~g~~l~~~~~l~~L~~~L~~~ 173 (296)
..+.|...|+||.|++++++|++.|+||.+..+....+ +.. -+|.+.. ++..++.|.+.|...
T Consensus 5 ~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~--------d~~~leql~kQL~Kl 69 (165)
T 2pc6_A 5 HIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNG--------PDEIVEQITKQLNKL 69 (165)
T ss_dssp EEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEE--------CHHHHHHHHHHHHHS
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEec--------cHHHHHHHHHHhcCC
Confidence 57899999999999999999999999999999987663 443 3455542 146778888888763
No 30
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.48 E-value=0.0065 Score=52.80 Aligned_cols=65 Identities=11% Similarity=0.187 Sum_probs=48.6
Q ss_pred cEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEE-ecC-CeeeeEEEEEeCCCCCChHHHHHHHHHHHHHc
Q 022480 217 RSLLYIETADRPGLLVEIMKIIADVNVDVESAEID-TEG-LVAKDKFHVSYGGAALNSSLSQVLVNCLRYYL 286 (296)
Q Consensus 217 ~TvleV~t~DRPGLL~dIt~~La~~gv~I~~AkI~-T~G-~ra~D~F~V~~~g~~L~~~~~~~L~~~L~~~l 286 (296)
...|.|...|+||.|++|+.+|++.|+||.+..+. |.. +...=++.+... +...++|.+.|.+.+
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~-----e~~ieqL~kQL~KLi 95 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD-----DKTIEQIEKQAYKLV 95 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC-----TTHHHHHHHHHTTST
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC-----HHHHHHHHHHhcCcC
Confidence 57899999999999999999999999999999885 544 333334455322 235677877777643
No 31
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=96.47 E-value=0.05 Score=46.35 Aligned_cols=110 Identities=15% Similarity=0.169 Sum_probs=69.4
Q ss_pred CeEEEEE-EeCCCccHHHHHHHHHHHCCceEEEEEEEEeC--CeEE-EEEEEeecCCCCCCCChHHHHHHHHHHHHhhcc
Q 022480 101 DATIVQL-SFGDRLGALIDTMNALKDLGLDVAKGTVNTEG--SVKQ-TKFFITRLDTGRKVEDPDLLERIRLTIINNLLK 176 (296)
Q Consensus 101 ~~t~V~V-~~~DrpGLLa~i~~vL~~~glnI~~A~I~T~~--~~~~-d~F~V~~~~~g~~l~~~~~l~~L~~~L~~~L~~ 176 (296)
+.+.|+| ..+|+||.++++.+.|+++|+||.--...... .+.. -.|.|... . +++..+.|.+ +..
T Consensus 15 ~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~--~--------~~~a~~~L~~-~~~ 83 (181)
T 3s1t_A 15 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRD--V--------GPAAVEKLDS-LRN 83 (181)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETT--T--------HHHHHHHHHH-THH
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehh--H--------HHHHHHHHHH-HHH
Confidence 4455555 36899999999999999999999754432222 3443 34666442 1 1222333333 110
Q ss_pred cCCCchhHhhhccccCccCCCccccccccceeeeccCCCCcEEEEEEeC---CCcchHHHHHHHHHhCCceEEEEE
Q 022480 177 YHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETA---DRPGLLVEIMKIIADVNVDVESAE 249 (296)
Q Consensus 177 ~~~~~~~~La~~~~~~~~~~~r~~~~~~~~~V~v~~~~~~~TvleV~t~---DRPGLL~dIt~~La~~gv~I~~Ak 249 (296)
.+. ...|.+.+ +...+.|.+. ++||+.+++.++|++.||||.+..
T Consensus 84 -------el~------------------~~~v~~~~---~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~Is 131 (181)
T 3s1t_A 84 -------EIG------------------FSQLLYDD---HIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 131 (181)
T ss_dssp -------HHC------------------CSEEEEES---CEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred -------hcC------------------cceEEEeC---CEEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEE
Confidence 010 01122222 3577777765 899999999999999999999877
No 32
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=96.23 E-value=0.0077 Score=53.30 Aligned_cols=38 Identities=21% Similarity=0.174 Sum_probs=31.2
Q ss_pred cEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecC
Q 022480 217 RSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEG 254 (296)
Q Consensus 217 ~TvleV~t~DRPGLL~dIt~~La~~gv~I~~AkI~T~G 254 (296)
...|.|.+.||||+|++|+++|+++++||...+..+..
T Consensus 4 ~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~ 41 (223)
T 1y7p_A 4 LRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIK 41 (223)
T ss_dssp CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECC
T ss_pred eEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccc
Confidence 47889999999999999999999999999999998853
No 33
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=96.06 E-value=0.027 Score=49.11 Aligned_cols=123 Identities=13% Similarity=0.126 Sum_probs=73.5
Q ss_pred CCCcEEEEeecCCCCeEEEEEE-eCCCccHHHHHHHHHHHCCceEEEEEEEEe--CCeEE-EEEEEeecCCCCCCCChHH
Q 022480 87 IPMPHVLIDQDSNSDATIVQLS-FGDRLGALIDTMNALKDLGLDVAKGTVNTE--GSVKQ-TKFFITRLDTGRKVEDPDL 162 (296)
Q Consensus 87 ~~~p~V~i~~~~~~~~t~V~V~-~~DrpGLLa~i~~vL~~~glnI~~A~I~T~--~~~~~-d~F~V~~~~~g~~l~~~~~ 162 (296)
+..|.|.--.. ..+...|+|. .+|+||..+++.+.|++.|+||---..... .++.. -.|.+... .
T Consensus 21 mE~~vVtGIa~-~~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~~----------d 89 (200)
T 4go7_X 21 MEDPILTGVAH-DRSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRD----------V 89 (200)
T ss_dssp CCSCEEEEEEE-ECSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEGG----------G
T ss_pred cccCcEEEEEc-cCCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecchh----------h
Confidence 44565533222 3455677776 699999999999999999999976433322 22343 34555431 1
Q ss_pred HHHHHHHHHHhhcccCCCchhHhhhccccCccCCCccccccccceeeeccCCCCcEEEEEE---eCCCcchHHHHHHHHH
Q 022480 163 LERIRLTIINNLLKYHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIE---TADRPGLLVEIMKIIA 239 (296)
Q Consensus 163 l~~L~~~L~~~L~~~~~~~~~~La~~~~~~~~~~~r~~~~~~~~~V~v~~~~~~~TvleV~---t~DRPGLL~dIt~~La 239 (296)
+++....|.+... .+. ...+.+++ +...|.|. ...+||+.+++.++|+
T Consensus 90 ~~~~~~~l~~~~~--------~~~------------------~~~v~~~~---~iakVSvVG~GM~~~~GVaak~F~aLa 140 (200)
T 4go7_X 90 GPAAVEKLDSLRN--------EIG------------------FSQLLYDD---HIGKVSLIGAGMRSHPGVTATFCEALA 140 (200)
T ss_dssp HHHHHHHHHTTHH--------HHC------------------CSEEEEEC---CEEEEEEEEESCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh--------hhc------------------eeeEEEec---CeeeeeeeccccccCCCcHHHHHHHHH
Confidence 1222222322111 110 00122222 23445544 5689999999999999
Q ss_pred hCCceEEEEE
Q 022480 240 DVNVDVESAE 249 (296)
Q Consensus 240 ~~gv~I~~Ak 249 (296)
+.||||....
T Consensus 141 ~~~INI~mIs 150 (200)
T 4go7_X 141 AVGVNIELIS 150 (200)
T ss_dssp HTTCCCCEEE
T ss_pred HCCCCEEEEE
Confidence 9999999885
No 34
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.00 E-value=0.027 Score=48.85 Aligned_cols=64 Identities=13% Similarity=0.189 Sum_probs=48.4
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEeCC-eEE-EEEEEeecCCCCCCCChHHHHHHHHHHHHh
Q 022480 102 ATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGS-VKQ-TKFFITRLDTGRKVEDPDLLERIRLTIINN 173 (296)
Q Consensus 102 ~t~V~V~~~DrpGLLa~i~~vL~~~glnI~~A~I~T~~~-~~~-d~F~V~~~~~g~~l~~~~~l~~L~~~L~~~ 173 (296)
...+.|...|+||.|++++++|+..|+||.+-.+..+.+ +.. -++.|.. + +..++.|.++|...
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g--~------e~~ieqL~kQL~KL 94 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKG--D------DKTIEQIEKQAYKL 94 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEE--C------TTHHHHHHHHHTTS
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEEC--C------HHHHHHHHHHhcCc
Confidence 468999999999999999999999999999988875554 443 3445543 1 25667777777653
No 35
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=95.88 E-value=0.034 Score=45.63 Aligned_cols=59 Identities=14% Similarity=0.172 Sum_probs=44.2
Q ss_pred EEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEeCCeEEEEEEEeecCCCCCCCChHHHHHHHHHHHH
Q 022480 104 IVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIIN 172 (296)
Q Consensus 104 ~V~V~~~DrpGLLa~i~~vL~~~glnI~~A~I~T~~~~~~d~F~V~~~~~g~~l~~~~~l~~L~~~L~~ 172 (296)
.|.|.|.||+|++.+|+++|+.+++||....+.+. +. +++.-+ ..+.+.+..|...|..
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~--g~---i~~~~~-----~~~~~~~~~L~~~l~~ 60 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPI--GR---IYLNFA-----ELEFESFSSLMAEIRR 60 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETT--TE---EEEEEC-----CCCHHHHHHHHHHHHH
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecC--CE---EEEEEE-----eCCHHHHHHHHHHHHc
Confidence 57899999999999999999999999999999665 33 233331 1133566777776665
No 36
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=95.69 E-value=0.19 Score=48.09 Aligned_cols=110 Identities=20% Similarity=0.240 Sum_probs=70.4
Q ss_pred CeEEEEEE-eCCCccHHHHHHHHHHHCCceEEEEEEEEeC--CeEE-EEEEEeecCCCCCCCChHHHHHHHHHHHHhhcc
Q 022480 101 DATIVQLS-FGDRLGALIDTMNALKDLGLDVAKGTVNTEG--SVKQ-TKFFITRLDTGRKVEDPDLLERIRLTIINNLLK 176 (296)
Q Consensus 101 ~~t~V~V~-~~DrpGLLa~i~~vL~~~glnI~~A~I~T~~--~~~~-d~F~V~~~~~g~~l~~~~~l~~L~~~L~~~L~~ 176 (296)
+.+.|+|. .+|++|.++++.+.|+++|+||..-...+.. .+.. -.|.|... +.++ ..+.|.+ +..
T Consensus 263 ~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~~-------~~~~---a~~~l~~-~~~ 331 (421)
T 3ab4_A 263 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPRS-------DGRR---AMEILKK-LQV 331 (421)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEETT-------THHH---HHHHHHH-HHT
T ss_pred CEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEech-------hHHH---HHHHHHH-HHH
Confidence 45567777 6899999999999999999999876543332 2322 34555431 1122 2233333 111
Q ss_pred cCCCchhHhhhccccCccCCCccccccccceeeeccCCCCcEEEEEEeC---CCcchHHHHHHHHHhCCceEEEEE
Q 022480 177 YHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETA---DRPGLLVEIMKIIADVNVDVESAE 249 (296)
Q Consensus 177 ~~~~~~~~La~~~~~~~~~~~r~~~~~~~~~V~v~~~~~~~TvleV~t~---DRPGLL~dIt~~La~~gv~I~~Ak 249 (296)
+.. + ..|.+.. +...+.|.+. ++||.++++.++|++.||||+...
T Consensus 332 -~~~---------------------~---~~v~~~~---~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~is 379 (421)
T 3ab4_A 332 -QGN---------------------W---TNVLYDD---QVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELIS 379 (421)
T ss_dssp -TTT---------------------C---SEEEEEC---CEEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCCEEE
T ss_pred -HcC---------------------C---ceEEEeC---CeEEEEEEccCcccCccHHHHHHHHHHHCCCCEEEEE
Confidence 000 0 0122222 4678888875 899999999999999999999553
No 37
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=94.83 E-value=0.053 Score=47.93 Aligned_cols=38 Identities=11% Similarity=0.118 Sum_probs=31.6
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEeC
Q 022480 102 ATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEG 139 (296)
Q Consensus 102 ~t~V~V~~~DrpGLLa~i~~vL~~~glnI~~A~I~T~~ 139 (296)
...+.|.+.||+|+|++++.+|++++.||...+..+..
T Consensus 4 ~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~ 41 (223)
T 1y7p_A 4 LRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIK 41 (223)
T ss_dssp CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECC
T ss_pred eEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccc
Confidence 35789999999999999999999999999999999976
No 38
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=94.71 E-value=0.095 Score=42.26 Aligned_cols=36 Identities=22% Similarity=0.356 Sum_probs=32.4
Q ss_pred cEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEe
Q 022480 217 RSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDT 252 (296)
Q Consensus 217 ~TvleV~t~DRPGLL~dIt~~La~~gv~I~~AkI~T 252 (296)
...++|..+|+||.|++|++.|++.|+||....+..
T Consensus 6 ~~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~ 41 (144)
T 2f06_A 6 AKQLSIFLENKSGRLTEVTEVLAKENINLSALCIAE 41 (144)
T ss_dssp EEEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred EEEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEe
Confidence 367888999999999999999999999999988753
No 39
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=94.21 E-value=0.9 Score=44.14 Aligned_cols=117 Identities=9% Similarity=0.167 Sum_probs=70.8
Q ss_pred CCeEEEEEEe---CCCccHHHHHHHHHHHCCceEEEEEEEEeCCeEEEEEEEeecCCCCCCCChHHHHHHHHHHHHhhcc
Q 022480 100 SDATIVQLSF---GDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLK 176 (296)
Q Consensus 100 ~~~t~V~V~~---~DrpGLLa~i~~vL~~~glnI~~A~I~T~~~~~~d~F~V~~~~~g~~l~~~~~l~~L~~~L~~~L~~ 176 (296)
.+...|+|.+ .+++|+++++.++|+++|+||..-...+... --.|.|... + .++..+.|.+.+..
T Consensus 316 ~~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~tse~--~Is~~V~~~---------d-~~~a~~~L~~~l~~ 383 (473)
T 3c1m_A 316 KNVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSSET--NISLVVSEE---------D-VDKALKALKREFGD 383 (473)
T ss_dssp EEEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCTTC--CEEEEEEGG---------G-HHHHHHHHHHHHCC
T ss_pred CCeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecCCCC--EEEEEEech---------H-HHHHHHHHHHHHhh
Confidence 3556788886 6888999999999999999998765533222 223666542 1 23333444433310
Q ss_pred cCCCchhHhhhccccCccCCCccccccccceeeeccCCCCcEEEEEEeC---CCcchHHHHHHHHHhCCceEEEE
Q 022480 177 YHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETA---DRPGLLVEIMKIIADVNVDVESA 248 (296)
Q Consensus 177 ~~~~~~~~La~~~~~~~~~~~r~~~~~~~~~V~v~~~~~~~TvleV~t~---DRPGLL~dIt~~La~~gv~I~~A 248 (296)
. ... .+ .....+ ..|.+.. +...+.|.+. ++||.++++.++|++.||||...
T Consensus 384 --~--~~~-----~~-----~~~~~~---~~v~~~~---~~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI~mi 438 (473)
T 3c1m_A 384 --F--GKK-----SF-----LNNNLI---RDVSVDK---DVCVISVVGAGMRGAKGIAGKIFTAVSESGANIKMI 438 (473)
T ss_dssp -------------CT-----TSCCCE---EEEEEEE---EEEEEEEECTTTTTCTTHHHHHHHHHHHHTCCCCEE
T ss_pred --h--ccc-----cc-----cccccc---ceEEEeC---CcEEEEEEecCCCCChhHHHHHHHHHHHCCCCEEEE
Confidence 0 000 00 000000 1122222 4678888876 69999999999999999999544
No 40
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=93.84 E-value=0.12 Score=49.38 Aligned_cols=49 Identities=20% Similarity=0.315 Sum_probs=42.9
Q ss_pred CcEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEEE
Q 022480 216 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 264 (296)
Q Consensus 216 ~~TvleV~t~DRPGLL~dIt~~La~~gv~I~~AkI~T~G~ra~D~F~V~ 264 (296)
+...|-+.-.|+||.+..|+++|.++||||......+.|+.+.=++.+.
T Consensus 330 ~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r~g~~A~~vidvD 378 (404)
T 1sc6_A 330 GGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIE 378 (404)
T ss_dssp SSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEEE
T ss_pred CcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccCCCCEEEEEEEcC
Confidence 3456778889999999999999999999999999999888887777663
No 41
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=93.53 E-value=0.23 Score=45.44 Aligned_cols=54 Identities=13% Similarity=0.139 Sum_probs=43.9
Q ss_pred cEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCe-eeeEEEEEeCCCCC
Q 022480 217 RSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLV-AKDKFHVSYGGAAL 270 (296)
Q Consensus 217 ~TvleV~t~DRPGLL~dIt~~La~~gv~I~~AkI~T~G~r-a~D~F~V~~~g~~L 270 (296)
.|.|-+..+|+||-|+++...|+.+|||+.+.+-.-.+.+ ..=.|||.-+|+.-
T Consensus 200 ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfvD~eg~~~ 254 (283)
T 2qmx_A 200 KTSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYADFIGHRE 254 (283)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEEEEESCTT
T ss_pred eEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEEEEecCCC
Confidence 4677777789999999999999999999999999765544 56678886577653
No 42
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=93.17 E-value=0.86 Score=45.74 Aligned_cols=124 Identities=15% Similarity=0.235 Sum_probs=74.2
Q ss_pred CCeEEEEEEeC---CCccHHHHHHHHHHHCCceEEEEEEEEeCCeEEEEEEEeecCCCCCCCChHHHHHHHHHHHHhhcc
Q 022480 100 SDATIVQLSFG---DRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLK 176 (296)
Q Consensus 100 ~~~t~V~V~~~---DrpGLLa~i~~vL~~~glnI~~A~I~T~~~~~~d~F~V~~~~~g~~l~~~~~l~~L~~~L~~~L~~ 176 (296)
.+...|.|+|. .+||..+++..+|.+.|+||..-. ..+.-+ .|.|... ..++..+.|.+.+..
T Consensus 353 ~~~a~VsvVG~gm~~~~Gv~a~if~aL~~~~Ini~~is---tSe~~I-s~vI~~~----------d~~~Av~aLh~~f~~ 418 (600)
T 3l76_A 353 KGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMIS---TSEVKV-SCVIDQR----------DADRAIAALSNAFGV 418 (600)
T ss_dssp CSEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCCCEEE---ECSSEE-EEEEEGG----------GHHHHHHHHHHHTTC
T ss_pred CCeEEEEEECCCcccCccHHHHHHHHHHhCCCcEEEEe---cCCCEE-EEEEcHH----------HHHHHHHHHHHhhcc
Confidence 46778899976 799999999999999999997654 223222 2555432 223344455555532
Q ss_pred cCCCchhHhhhccccCccCCCccccccccceeeeccCCCCcEEEEEE-eCCCcchHHHHHHHHHhCCceEEEEEEEe
Q 022480 177 YHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIE-TADRPGLLVEIMKIIADVNVDVESAEIDT 252 (296)
Q Consensus 177 ~~~~~~~~La~~~~~~~~~~~r~~~~~~~~~V~v~~~~~~~TvleV~-t~DRPGLL~dIt~~La~~gv~I~~AkI~T 252 (296)
+..... .+ ..+.. -+.-+-|..+. +.+.|.|. .+|+||+.++|...|++.||+|....-+.
T Consensus 419 ~~t~~~--------~~-~~~~~---~~~v~Gia~~~---~~a~i~i~~~~~~~g~~~~if~~La~~~I~vDmI~q~~ 480 (600)
T 3l76_A 419 TLSPPK--------NQ-TDTSH---LPAVRGVALDQ---DQAQIAIRHVPDRPGMAAQLFTALAEANISVDMIIQSQ 480 (600)
T ss_dssp CBCCCC--------CC-CC------CCSCCEEEEEC---SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred cCCCcc--------cc-ccccc---cCceEEEEeeC---CEEEEEEecCCCCccHHHHHHHHHHHcCCcEEEEEecc
Confidence 100000 00 00000 01112233222 34566654 58999999999999999999997765543
No 43
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=93.09 E-value=0.33 Score=47.90 Aligned_cols=62 Identities=19% Similarity=0.337 Sum_probs=46.2
Q ss_pred CcEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEec--CCeeeeEEEEEeCCCCCChHHHHHHHH
Q 022480 216 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTE--GLVAKDKFHVSYGGAALNSSLSQVLVN 280 (296)
Q Consensus 216 ~~TvleV~t~DRPGLL~dIt~~La~~gv~I~~AkI~T~--G~ra~D~F~V~~~g~~L~~~~~~~L~~ 280 (296)
.++.|.+.-.|+||.+..|+..|.++||||..+++... |+.+.=++.+ + .++.++..++|++
T Consensus 453 ~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~v--d-~~~~~~~l~~l~~ 516 (529)
T 1ygy_A 453 QGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRL--D-QDVPDDVRTAIAA 516 (529)
T ss_dssp CSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEE--S-SCCCHHHHHHHHH
T ss_pred CccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEE--C-CCCCHHHHHHHhc
Confidence 46888899999999999999999999999999999764 4444444444 2 3455555555543
No 44
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=93.01 E-value=1.4 Score=44.25 Aligned_cols=138 Identities=14% Similarity=0.147 Sum_probs=83.7
Q ss_pred CCeEEEEEE-eCCCccHHHHHHHHHHHCCceEEEEEEEEeC---Ce--EE-EEEEEeecCCCCCCCChHHHHHHHHHHHH
Q 022480 100 SDATIVQLS-FGDRLGALIDTMNALKDLGLDVAKGTVNTEG---SV--KQ-TKFFITRLDTGRKVEDPDLLERIRLTIIN 172 (296)
Q Consensus 100 ~~~t~V~V~-~~DrpGLLa~i~~vL~~~glnI~~A~I~T~~---~~--~~-d~F~V~~~~~g~~l~~~~~l~~L~~~L~~ 172 (296)
.+...|+|. .+|+||+.+++.+.|+++|+||.--...... ++ .. -.|.|.. +.+++..+.|.+
T Consensus 442 ~~~a~i~i~~~~~~~g~~~~if~~La~~~I~vDmI~q~~~~~~~~g~~~~~isftv~~----------~d~~~a~~~l~~ 511 (600)
T 3l76_A 442 QDQAQIAIRHVPDRPGMAAQLFTALAEANISVDMIIQSQRCRINQGTPCRDIAFMVAE----------GDSSQAEAILQP 511 (600)
T ss_dssp CSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCEEEEEEECCCSSSSCEEEEEEEEEH----------HHHHHHHHHHHH
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCcEEEEEecccccccCCCccceEEEEEeH----------HHHHHHHHHHHH
Confidence 455667665 6999999999999999999999544443332 12 22 2355543 333444444443
Q ss_pred hhcccCCCchhHhhhccccCccCCCccccccccceeeeccCCCCcEEEEEEe---CCCcchHHHHHHHHHhCCceEEEEE
Q 022480 173 NLLKYHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIET---ADRPGLLVEIMKIIADVNVDVESAE 249 (296)
Q Consensus 173 ~L~~~~~~~~~~La~~~~~~~~~~~r~~~~~~~~~V~v~~~~~~~TvleV~t---~DRPGLL~dIt~~La~~gv~I~~Ak 249 (296)
+.. ..+ ..++.+++ +...|.|.+ ..+||..+++.++|++.||||.+..
T Consensus 512 -~~~-~~~------------------------~~~v~~~~---~~akVSiVG~GM~~~~Gvaa~~f~aL~~~~Ini~mis 562 (600)
T 3l76_A 512 -LIK-DWL------------------------DAAIVVNK---AIAKVSIVGSGMIGHPGVAAHFFAALAQENINIEMIA 562 (600)
T ss_dssp -HTT-TST------------------------TCEEEEEC---CEEEEEEECGGGTTCTTHHHHHHHHHHTTTCCCCEEE
T ss_pred -HHH-hcC------------------------CceEEEeC---CeEEEEEECcccccCccHHHHHHHHHHHCCCceEEEE
Confidence 211 000 01122222 467888876 5999999999999999999998766
Q ss_pred EEecCCeeeeEEEEEeCCCCCChHHHHHHHHHHHHHcC
Q 022480 250 IDTEGLVAKDKFHVSYGGAALNSSLSQVLVNCLRYYLR 287 (296)
Q Consensus 250 I~T~G~ra~D~F~V~~~g~~L~~~~~~~L~~~L~~~l~ 287 (296)
|-.-. =.+.|.. +..++..++|..++.
T Consensus 563 --tSEi~--Is~vV~~-------~~~~~Av~alh~~F~ 589 (600)
T 3l76_A 563 --TSEIK--ISCVVPQ-------DRGVDALKAAHSAFN 589 (600)
T ss_dssp --ECSSE--EEEEEEG-------GGHHHHHHHHHHHTT
T ss_pred --cCCce--EEEEEeH-------HHHHHHHHHHHHHhC
Confidence 32222 2344432 123445567776654
No 45
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=92.93 E-value=0.69 Score=43.15 Aligned_cols=55 Identities=15% Similarity=0.189 Sum_probs=41.6
Q ss_pred cEEEEEEeC--CCcchHHHHHHHHHhCCceEEEEEEEecCCe-eeeEEEEEeCCCCCC
Q 022480 217 RSLLYIETA--DRPGLLVEIMKIIADVNVDVESAEIDTEGLV-AKDKFHVSYGGAALN 271 (296)
Q Consensus 217 ~TvleV~t~--DRPGLL~dIt~~La~~gv~I~~AkI~T~G~r-a~D~F~V~~~g~~L~ 271 (296)
.+.+-+... |+||-||++...|+.+|||+.+.+-.-.+.+ -.=.|||.-+|+.-.
T Consensus 206 kts~i~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~eg~~~d 263 (329)
T 3luy_A 206 YESVLTLIPLVTGPGVLANLLDVFRDAGLNMTSFISRPIKGRTGTYSFIVTLDAAPWE 263 (329)
T ss_dssp EEEEEEEECSCCSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEEEEESSCTTS
T ss_pred ceEEEEEecCCCCCCHHHHHHHHHHHCCcceEEEEeeECCCCCccEEEEEEEeCCcCC
Confidence 344444454 7999999999999999999999998765555 455788755887643
No 46
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=92.92 E-value=0.32 Score=45.10 Aligned_cols=54 Identities=24% Similarity=0.399 Sum_probs=43.4
Q ss_pred CcEEEEEEeC-CCcchHHHHHHHHHhCCceEEEEEEEecCCe-eeeEEEEEeCCCC
Q 022480 216 KRSLLYIETA-DRPGLLVEIMKIIADVNVDVESAEIDTEGLV-AKDKFHVSYGGAA 269 (296)
Q Consensus 216 ~~TvleV~t~-DRPGLL~dIt~~La~~gv~I~~AkI~T~G~r-a~D~F~V~~~g~~ 269 (296)
+.|.|-+..+ |+||-|+++...|+.+|||+.+.+-.-.+.. .+=.|||.-+|+.
T Consensus 200 ~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~eg~~ 255 (313)
T 3mwb_A 200 DKTTVVVPLPEDHPGALMEILDQFASRGVNLSRIESRPTGQYLGHYFFSIDADGHA 255 (313)
T ss_dssp EEEEEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTSEEEEEEEESCT
T ss_pred CeEEEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEeecCCCCccEEEEEEEeCCC
Confidence 3577777775 9999999999999999999999998755444 4557888547765
No 47
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=92.31 E-value=0.55 Score=42.53 Aligned_cols=51 Identities=22% Similarity=0.296 Sum_probs=41.5
Q ss_pred CcEEEEEEe---CCCcchHHHHHHHHHhCCceEEEEEEEecCCe-eeeEEEEEeC
Q 022480 216 KRSLLYIET---ADRPGLLVEIMKIIADVNVDVESAEIDTEGLV-AKDKFHVSYG 266 (296)
Q Consensus 216 ~~TvleV~t---~DRPGLL~dIt~~La~~gv~I~~AkI~T~G~r-a~D~F~V~~~ 266 (296)
+.|.|-+.. .|+||-|+++...|+.+|||+.+.+-.-.+.. ..=.|||.-+
T Consensus 185 ~ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~e 239 (267)
T 2qmw_A 185 NATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQAD 239 (267)
T ss_dssp SCSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEEES
T ss_pred CeEEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEeecCCCCccEEEEEEEe
Confidence 356666777 89999999999999999999999999765544 5667888546
No 48
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=91.36 E-value=1.4 Score=42.67 Aligned_cols=107 Identities=13% Similarity=0.191 Sum_probs=67.9
Q ss_pred CeEEEEEEe---CCCccHHHHHHHHHHHCCceEEEEEEEEeCCeEEEEEEEeecCCCCCCCChHHHHHHHHHHHHhhccc
Q 022480 101 DATIVQLSF---GDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLKY 177 (296)
Q Consensus 101 ~~t~V~V~~---~DrpGLLa~i~~vL~~~glnI~~A~I~T~~~~~~d~F~V~~~~~g~~l~~~~~l~~L~~~L~~~L~~~ 177 (296)
+.+.|+|.+ ++.+|.++++.++|+++|+||..-. +....+ .|.|... +-. ...+++.+.|...+.
T Consensus 297 ~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i~--~~~~~i--s~~V~~~-d~~-----~~~~~~~~el~~~~~-- 364 (446)
T 3tvi_A 297 NFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHMP--SGVDSV--SLVIEDC-KLD-----GKCDKIIEEIKKQCN-- 364 (446)
T ss_dssp EEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEBC--EETTEE--EEEEEHH-HHT-----TTHHHHHHHHHHHSC--
T ss_pred CEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEEe--cCCCEE--EEEEecc-hHH-----HHHHHHHHHHHHhcC--
Confidence 345677775 6899999999999999999997532 222222 3666542 110 112233333332111
Q ss_pred CCCchhHhhhccccCccCCCccccccccceeeeccCCCCcEEEEEEeC---CCcchHHHHHHHHHhCCceEEEEE
Q 022480 178 HPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETA---DRPGLLVEIMKIIADVNVDVESAE 249 (296)
Q Consensus 178 ~~~~~~~La~~~~~~~~~~~r~~~~~~~~~V~v~~~~~~~TvleV~t~---DRPGLL~dIt~~La~~gv~I~~Ak 249 (296)
. ..|.+.+ +...|.|.+. .+||+.+++.++|++.||||....
T Consensus 365 -~--------------------------~~v~v~~---~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIs 409 (446)
T 3tvi_A 365 -P--------------------------DSIEIHP---NMALVATVGTGMAKTKGIANKIFTALSKENVNIRMID 409 (446)
T ss_dssp -C--------------------------SEEEEEE---EEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEE
T ss_pred -C--------------------------CcEEEeC---CeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEE
Confidence 0 0122222 3578888876 599999999999999999998875
No 49
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=89.21 E-value=1.1 Score=42.87 Aligned_cols=48 Identities=15% Similarity=0.169 Sum_probs=39.4
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEeCCeEEEEEEE
Q 022480 101 DATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFI 148 (296)
Q Consensus 101 ~~t~V~V~~~DrpGLLa~i~~vL~~~glnI~~A~I~T~~~~~~d~F~V 148 (296)
+...+.+.-.|+||.+.+++.+|.++|+||..-.+.+.|+..+-++-+
T Consensus 330 ~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r~g~~A~~vidv 377 (404)
T 1sc6_A 330 GGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDI 377 (404)
T ss_dssp SSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEE
T ss_pred CcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccCCCCEEEEEEEc
Confidence 455788899999999999999999999999999999966655433333
No 50
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=88.94 E-value=1.7 Score=42.74 Aligned_cols=41 Identities=17% Similarity=0.294 Sum_probs=36.4
Q ss_pred CCeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEeCC
Q 022480 100 SDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGS 140 (296)
Q Consensus 100 ~~~t~V~V~~~DrpGLLa~i~~vL~~~glnI~~A~I~T~~~ 140 (296)
..+..+.+.-+|+||.+..++..|.++|+||...++.....
T Consensus 452 ~~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~ 492 (529)
T 1ygy_A 452 AQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAE 492 (529)
T ss_dssp SCSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSS
T ss_pred CCccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCC
Confidence 34568889999999999999999999999999999988643
No 51
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=87.40 E-value=0.55 Score=45.55 Aligned_cols=35 Identities=29% Similarity=0.566 Sum_probs=30.7
Q ss_pred CcEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEE
Q 022480 216 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEI 250 (296)
Q Consensus 216 ~~TvleV~t~DRPGLL~dIt~~La~~gv~I~~AkI 250 (296)
..+.+.+...|+||.|++|+.+|.++||+|++..=
T Consensus 358 ~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q 392 (444)
T 3mtj_A 358 TAYYLRLRAFDRPGVLADITRILADSSISIDAMVQ 392 (444)
T ss_dssp EEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEE
T ss_pred eeeEEEEEecCcccHHHHHHHHHHhcCCceeEEee
Confidence 46888999999999999999999999999998653
No 52
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=87.20 E-value=2.8 Score=40.25 Aligned_cols=48 Identities=19% Similarity=0.361 Sum_probs=43.7
Q ss_pred CcEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEE
Q 022480 216 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHV 263 (296)
Q Consensus 216 ~~TvleV~t~DRPGLL~dIt~~La~~gv~I~~AkI~T~G~ra~D~F~V 263 (296)
....|.+.-.|+||.|..|..+|+++|+||....-.|.|+-+.-+.-+
T Consensus 342 ~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~~~~~~y~~~d~ 389 (416)
T 3k5p_A 342 TGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEA 389 (416)
T ss_dssp SSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEE
T ss_pred CceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccCCCceEEEEEEe
Confidence 468999999999999999999999999999999999999887766666
No 53
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=86.81 E-value=3.9 Score=40.20 Aligned_cols=122 Identities=14% Similarity=0.232 Sum_probs=73.6
Q ss_pred CeEEEEEEe---CCCccHHHHHHHHHHHCCceEEEEEEEEeCCeEEEEEEEeecCCCCCCCChHHHHHHHHHHHHhhccc
Q 022480 101 DATIVQLSF---GDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLKY 177 (296)
Q Consensus 101 ~~t~V~V~~---~DrpGLLa~i~~vL~~~glnI~~A~I~T~~~~~~d~F~V~~~~~g~~l~~~~~l~~L~~~L~~~L~~~ 177 (296)
+.+.|+|.+ .+++|.++++.++|+++|+||..-. +....+ +|.|... +..... ...+.++.. ...+..
T Consensus 340 ~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I~--sse~si--s~~v~~~-~~~~~~--~~~~~l~~~-~~el~~- 410 (510)
T 2cdq_A 340 NVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVVA--TSEVSI--SLTLDPS-KLWSRE--LIQQELDHV-VEELEK- 410 (510)
T ss_dssp EEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEEE--EETTEE--EEEECCG-GGSSSC--CCHHHHHHH-HHHHTT-
T ss_pred CeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEEE--eCCCeE--EEEEech-Hhhhhh--HHHHHHHHH-HHHhCC-
Confidence 556788885 7899999999999999999998752 322222 3666542 111100 000112111 111110
Q ss_pred CCCchhHhhhccccCccCCCccccccccceeeeccCCCCcEEEEEEeC--CCcchHHHHHHHHHhCCceEEEEEEEecCC
Q 022480 178 HPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETA--DRPGLLVEIMKIIADVNVDVESAEIDTEGL 255 (296)
Q Consensus 178 ~~~~~~~La~~~~~~~~~~~r~~~~~~~~~V~v~~~~~~~TvleV~t~--DRPGLL~dIt~~La~~gv~I~~AkI~T~G~ 255 (296)
+ ..|.+.+ +...|.|.+. .+||+.+++..+|++.||||.... .|.
T Consensus 411 ------------------------~---~~v~~~~---~~a~VsiVG~m~~~~Gvaa~~f~aL~~~~InI~mIs---qGs 457 (510)
T 2cdq_A 411 ------------------------I---AVVNLLK---GRAIISLIGNVQHSSLILERAFHVLYTKGVNVQMIS---QGA 457 (510)
T ss_dssp ------------------------T---SEEEEEE---EEEEEEEEECGGGHHHHHHHHHHHHHHHTCCCSEEE---ECT
T ss_pred ------------------------C---CeEEEeC---CcEEEEEEEECCCChhHHHHHHHHHHHCCCCEEEEE---ecC
Confidence 0 0122222 3577777777 889999999999999999998764 454
Q ss_pred eeee-EEEEE
Q 022480 256 VAKD-KFHVS 264 (296)
Q Consensus 256 ra~D-~F~V~ 264 (296)
.-.. .|.|.
T Consensus 458 Sei~Is~vV~ 467 (510)
T 2cdq_A 458 SKVNISFIVN 467 (510)
T ss_dssp TCSEEEEEEE
T ss_pred CcceEEEEEe
Confidence 3333 46664
No 54
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=84.23 E-value=3.8 Score=33.71 Aligned_cols=33 Identities=12% Similarity=0.164 Sum_probs=30.3
Q ss_pred CCeEEEEEEeCC---CccHHHHHHHHHHHCCceEEE
Q 022480 100 SDATIVQLSFGD---RLGALIDTMNALKDLGLDVAK 132 (296)
Q Consensus 100 ~~~t~V~V~~~D---rpGLLa~i~~vL~~~glnI~~ 132 (296)
.+...|.|+|.+ +||.++++..+|.++|+||..
T Consensus 101 ~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~ 136 (167)
T 2re1_A 101 DTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQM 136 (167)
T ss_dssp SSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCE
T ss_pred CCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEE
Confidence 467889999887 999999999999999999987
No 55
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=83.63 E-value=1.8 Score=41.70 Aligned_cols=68 Identities=10% Similarity=0.189 Sum_probs=48.9
Q ss_pred CcEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecC-CeeeeEEEEEeCCCCCChHHHHHHHHHHHHH
Q 022480 216 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEG-LVAKDKFHVSYGGAALNSSLSQVLVNCLRYY 285 (296)
Q Consensus 216 ~~TvleV~t~DRPGLL~dIt~~La~~gv~I~~AkI~T~G-~ra~D~F~V~~~g~~L~~~~~~~L~~~L~~~ 285 (296)
+.|.|-+...|+||-|+++.+.|+.+|||+.+.+.--.+ ...+=.|||.-+ + ..++..+++.+.|+..
T Consensus 33 dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfVD~e-h-~~d~~v~~AL~eL~~~ 101 (429)
T 1phz_A 33 GAISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYLD-K-RTKPVLGSIIKSLRND 101 (429)
T ss_dssp CCEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEECBC-G-GGHHHHHHHHHHHHHT
T ss_pred CeEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEEEEe-e-CCCHHHHHHHHHHHhh
Confidence 467777778999999999999999999999999886544 445667888435 3 2344334444555544
No 56
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=81.23 E-value=6.4 Score=35.74 Aligned_cols=52 Identities=15% Similarity=0.252 Sum_probs=40.6
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEeCCe-EEEEEEEeecCCCC
Q 022480 102 ATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSV-KQTKFFITRLDTGR 155 (296)
Q Consensus 102 ~t~V~V~~~DrpGLLa~i~~vL~~~glnI~~A~I~T~~~~-~~d~F~V~~~~~g~ 155 (296)
-|.|.+..+|+||.|+++.+.|+.+|+|..+-.-.-..++ +.-.|+|.- +|.
T Consensus 200 ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfvD~--eg~ 252 (283)
T 2qmx_A 200 KTSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYADF--IGH 252 (283)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEEEE--ESC
T ss_pred eEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEEEE--ecC
Confidence 4566677789999999999999999999987766666553 245588876 565
No 57
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=81.14 E-value=3.2 Score=34.64 Aligned_cols=38 Identities=13% Similarity=0.388 Sum_probs=32.4
Q ss_pred CcEEEEEE-eCCCcchHHHHHHHHHhCCceEEEEEEEec
Q 022480 216 KRSLLYIE-TADRPGLLVEIMKIIADVNVDVESAEIDTE 253 (296)
Q Consensus 216 ~~TvleV~-t~DRPGLL~dIt~~La~~gv~I~~AkI~T~ 253 (296)
+.+.|+|. ..|+||.+++|.+.|++.||+|...-.++.
T Consensus 14 ~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~ 52 (178)
T 2dtj_A 14 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVS 52 (178)
T ss_dssp SEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCC
T ss_pred CEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 45777774 689999999999999999999998877654
No 58
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=80.35 E-value=1.2 Score=36.78 Aligned_cols=50 Identities=14% Similarity=0.240 Sum_probs=36.3
Q ss_pred CcEEEEEEe-CCCcchHHHHHHHHHhCCceEEEEEEEec---CCeeeeEEEEEe
Q 022480 216 KRSLLYIET-ADRPGLLVEIMKIIADVNVDVESAEIDTE---GLVAKDKFHVSY 265 (296)
Q Consensus 216 ~~TvleV~t-~DRPGLL~dIt~~La~~gv~I~~AkI~T~---G~ra~D~F~V~~ 265 (296)
+.+.|.|.+ +|+||.+++|.++|++.|++|........ .+...=.|.|..
T Consensus 15 ~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~ 68 (167)
T 2dt9_A 15 DHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKK 68 (167)
T ss_dssp SEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEG
T ss_pred CEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEeh
Confidence 457777776 79999999999999999999998654321 112333477753
No 59
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=79.51 E-value=1.5 Score=35.87 Aligned_cols=100 Identities=13% Similarity=0.078 Sum_probs=60.5
Q ss_pred CCeEEEEEEe---CCCccHHHHHHHHHHHCCceEEEEEEEEeCCeEEEEEEEeecCCCCCCCChHHHHHHHHHHHHhhcc
Q 022480 100 SDATIVQLSF---GDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLK 176 (296)
Q Consensus 100 ~~~t~V~V~~---~DrpGLLa~i~~vL~~~glnI~~A~I~T~~~~~~d~F~V~~~~~g~~l~~~~~l~~L~~~L~~~L~~ 176 (296)
.+.+.|+|.+ ++++|..+++.+.|+++|+||..-. +.... -.|.|.+. +.+++ .|.+ |..
T Consensus 16 ~~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~--~s~~~--Isf~v~~~---------~~~~~---il~~-l~~ 78 (157)
T 3mah_A 16 DGITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVA--TSEVG--VSLTIDND---------KNLPD---IVRA-LSD 78 (157)
T ss_dssp EEEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEE--CCSSE--EEEEESCC---------TTHHH---HHHH-HTT
T ss_pred CCEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEE--ecCCE--EEEEECCh---------HHHHH---HHHH-Hhc
Confidence 3556778774 5789999999999999999986433 22222 23666432 11122 2222 210
Q ss_pred cCCCchhHhhhccccCccCCCccccccccceeeeccCCCCcEEEEEEeC---CCcchHHHHHHHHHhCCceEEEEE
Q 022480 177 YHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETA---DRPGLLVEIMKIIADVNVDVESAE 249 (296)
Q Consensus 177 ~~~~~~~~La~~~~~~~~~~~r~~~~~~~~~V~v~~~~~~~TvleV~t~---DRPGLL~dIt~~La~~gv~I~~Ak 249 (296)
. ..|.+.+ +...+.|.+. ++||+.+++.++|+ |++|....
T Consensus 79 --~--------------------------~~v~~~~---~~a~vsvvG~gm~~~~gv~a~~f~aL~--~Ini~~is 121 (157)
T 3mah_A 79 --I--------------------------GDVTVDK---DMVIICIVGDMEWDNVGFEARIINALK--GVPVRMIS 121 (157)
T ss_dssp --T--------------------------EEEEEEE---EEEEEEEEC------CCHHHHHHHTTT--TSCCSEEE
T ss_pred --c--------------------------CeEEEeC---CeEEEEEECCCcccCccHHHHHHHHhC--CCCeEEEe
Confidence 0 0122222 3577777765 78999999999999 99988754
No 60
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=78.21 E-value=21 Score=33.00 Aligned_cols=52 Identities=15% Similarity=0.178 Sum_probs=39.2
Q ss_pred eEEEEEEeC--CCccHHHHHHHHHHHCCceEEEEEEEEeCCeE-EEEEEEeecCCCC
Q 022480 102 ATIVQLSFG--DRLGALIDTMNALKDLGLDVAKGTVNTEGSVK-QTKFFITRLDTGR 155 (296)
Q Consensus 102 ~t~V~V~~~--DrpGLLa~i~~vL~~~glnI~~A~I~T~~~~~-~d~F~V~~~~~g~ 155 (296)
.+.+.+..+ |+||-|+++-+.|+.+|+|..+-.-.-..++. .-.|+|.- +|.
T Consensus 206 kts~i~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~--eg~ 260 (329)
T 3luy_A 206 YESVLTLIPLVTGPGVLANLLDVFRDAGLNMTSFISRPIKGRTGTYSFIVTL--DAA 260 (329)
T ss_dssp EEEEEEEECSCCSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEEEEE--SSC
T ss_pred ceEEEEEecCCCCCCHHHHHHHHHHHCCcceEEEEeeECCCCCccEEEEEEE--eCC
Confidence 344444444 79999999999999999999877777666644 45688776 576
No 61
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=75.57 E-value=8.5 Score=36.82 Aligned_cols=54 Identities=22% Similarity=0.346 Sum_probs=43.6
Q ss_pred CCCcEEEEeecCCCCeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEeCCeE
Q 022480 87 IPMPHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVK 142 (296)
Q Consensus 87 ~~~p~V~i~~~~~~~~t~V~V~~~DrpGLLa~i~~vL~~~glnI~~A~I~T~~~~~ 142 (296)
++.|.|... ...+...|.+.-.|.||.+.+|..+|+++|+||..-...|.++..
T Consensus 330 Vn~p~~~~~--~~~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~~~~~~ 383 (416)
T 3k5p_A 330 VNFPQVQLP--PRPTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVG 383 (416)
T ss_dssp SSSCCCCCC--CCSSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEECSSCE
T ss_pred eeCCCcCCC--CCCCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccCCCceE
Confidence 455665442 234568999999999999999999999999999988888887755
No 62
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=74.49 E-value=2.5 Score=36.46 Aligned_cols=50 Identities=18% Similarity=0.271 Sum_probs=36.0
Q ss_pred CcEEEEEE-eCCCcchHHHHHHHHHhCCceEEEEEEEe--c-CCeeeeEEEEEe
Q 022480 216 KRSLLYIE-TADRPGLLVEIMKIIADVNVDVESAEIDT--E-GLVAKDKFHVSY 265 (296)
Q Consensus 216 ~~TvleV~-t~DRPGLL~dIt~~La~~gv~I~~AkI~T--~-G~ra~D~F~V~~ 265 (296)
+.+.|.|. .+|+||++++|..+|++.||||...--+. . .....-.|.+..
T Consensus 34 ~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~ 87 (200)
T 4go7_X 34 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSR 87 (200)
T ss_dssp SEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEG
T ss_pred CEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecch
Confidence 35667765 57999999999999999999999875332 1 234444576643
No 63
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=74.39 E-value=12 Score=34.45 Aligned_cols=53 Identities=23% Similarity=0.387 Sum_probs=39.7
Q ss_pred CeEEEEEEeC-CCccHHHHHHHHHHHCCceEEEEEEEEeCCeE-EEEEEEeecCCCC
Q 022480 101 DATIVQLSFG-DRLGALIDTMNALKDLGLDVAKGTVNTEGSVK-QTKFFITRLDTGR 155 (296)
Q Consensus 101 ~~t~V~V~~~-DrpGLLa~i~~vL~~~glnI~~A~I~T~~~~~-~d~F~V~~~~~g~ 155 (296)
+-|.|.+..+ |+||.|+++-+.|+.+|+|..+-.-.-..++. .-.|+|.- +|.
T Consensus 200 ~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~--eg~ 254 (313)
T 3mwb_A 200 DKTTVVVPLPEDHPGALMEILDQFASRGVNLSRIESRPTGQYLGHYFFSIDA--DGH 254 (313)
T ss_dssp EEEEEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTSEEEEEEE--ESC
T ss_pred CeEEEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEeecCCCCccEEEEEEE--eCC
Confidence 4467777775 99999999999999999999776665554432 23488876 465
No 64
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=68.53 E-value=9.6 Score=36.73 Aligned_cols=50 Identities=20% Similarity=0.218 Sum_probs=35.4
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEeC--CeEEEEEEEee
Q 022480 101 DATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEG--SVKQTKFFITR 150 (296)
Q Consensus 101 ~~t~V~V~~~DrpGLLa~i~~vL~~~glnI~~A~I~T~~--~~~~d~F~V~~ 150 (296)
..+-+.+...|+||.|++|+++|.++|++|.+....... +..+...+++.
T Consensus 358 ~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~~~~~~~~~~~~v~~th 409 (444)
T 3mtj_A 358 TAYYLRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQVDIILLTH 409 (444)
T ss_dssp EEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEECC------CEEEEEEEC
T ss_pred eeeEEEEEecCcccHHHHHHHHHHhcCCceeEEeecccccCCCCceEEEEec
Confidence 445777889999999999999999999999876554321 12345566665
No 65
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=66.75 E-value=27 Score=31.26 Aligned_cols=50 Identities=16% Similarity=0.245 Sum_probs=38.3
Q ss_pred CeEEEEEEe---CCCccHHHHHHHHHHHCCceEEEEEEEEeCCeE-EEEEEEee
Q 022480 101 DATIVQLSF---GDRLGALIDTMNALKDLGLDVAKGTVNTEGSVK-QTKFFITR 150 (296)
Q Consensus 101 ~~t~V~V~~---~DrpGLLa~i~~vL~~~glnI~~A~I~T~~~~~-~d~F~V~~ 150 (296)
+-|.|.+.. +|+||.|+++.+.|+.+|+|..+-.-.-..++. .-.|+|.-
T Consensus 185 ~ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~ 238 (267)
T 2qmw_A 185 NATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQA 238 (267)
T ss_dssp SCSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEEE
T ss_pred CeEEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEeecCCCCccEEEEEEE
Confidence 345666666 899999999999999999999877666665532 34587765
No 66
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=62.28 E-value=26 Score=29.18 Aligned_cols=35 Identities=17% Similarity=0.148 Sum_probs=30.7
Q ss_pred CCeEEEEEEeC---CCccHHHHHHHHHHHCCceEEEEE
Q 022480 100 SDATIVQLSFG---DRLGALIDTMNALKDLGLDVAKGT 134 (296)
Q Consensus 100 ~~~t~V~V~~~---DrpGLLa~i~~vL~~~glnI~~A~ 134 (296)
++...|.|+|. +.||..+++.++|++.|+||....
T Consensus 94 ~~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~Is 131 (181)
T 3s1t_A 94 DHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 131 (181)
T ss_dssp SCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred CCEEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEE
Confidence 46678888876 899999999999999999998766
No 67
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=55.74 E-value=26 Score=33.14 Aligned_cols=50 Identities=12% Similarity=0.258 Sum_probs=37.2
Q ss_pred CcEEEEEE-eCCCcchHHHHHHHHHhCCceEEEEEEEec---CCeeeeEEEEEe
Q 022480 216 KRSLLYIE-TADRPGLLVEIMKIIADVNVDVESAEIDTE---GLVAKDKFHVSY 265 (296)
Q Consensus 216 ~~TvleV~-t~DRPGLL~dIt~~La~~gv~I~~AkI~T~---G~ra~D~F~V~~ 265 (296)
+.+.|.|. ..|+||.+++|.+.|+++|++|.....+|. .+...=.|.|..
T Consensus 263 ~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~ 316 (421)
T 3ab4_A 263 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPR 316 (421)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEET
T ss_pred CEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEec
Confidence 35778888 689999999999999999999998865442 122333466643
No 68
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=47.25 E-value=12 Score=30.24 Aligned_cols=34 Identities=6% Similarity=0.065 Sum_probs=28.9
Q ss_pred CcEEEEEEe---CCCcchHHHHHHHHHhCCceEEEEE
Q 022480 216 KRSLLYIET---ADRPGLLVEIMKIIADVNVDVESAE 249 (296)
Q Consensus 216 ~~TvleV~t---~DRPGLL~dIt~~La~~gv~I~~Ak 249 (296)
+.+.|+|.+ .|+||.+++|..+|+++|++|....
T Consensus 17 ~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~ 53 (157)
T 3mah_A 17 GITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVA 53 (157)
T ss_dssp EEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEE
T ss_pred CEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEE
Confidence 357788874 4899999999999999999997765
No 69
>1rwu_A Hypothetical UPF0250 protein YBED; mixed alpha-beta fold, structural genomics, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.58.54.1
Probab=44.40 E-value=1.1e+02 Score=23.62 Aligned_cols=64 Identities=6% Similarity=-0.042 Sum_probs=43.4
Q ss_pred CCeEEEEEEeCCCccHHHHHHHHHHHC---CceEEEEEEEEeCCeEEEEEEEeecCCCCCCCChHHHHHHHHHHH
Q 022480 100 SDATIVQLSFGDRLGALIDTMNALKDL---GLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTII 171 (296)
Q Consensus 100 ~~~t~V~V~~~DrpGLLa~i~~vL~~~---glnI~~A~I~T~~~~~~d~F~V~~~~~g~~l~~~~~l~~L~~~L~ 171 (296)
+..+.+.|.+.+.+++...|..++..+ +..+ .-+-+..|...- +.|.-. +.++++++.|-+.|.
T Consensus 34 Pc~y~~KvIG~a~~~~~~~V~~vv~~~~p~d~~~-~~r~Ss~GkY~S--vtv~v~-----v~S~eQv~aiY~~L~ 100 (109)
T 1rwu_A 34 PTPFTYKVMGQALPELVDQVVEVVQRHAPGDYTP-TVKPSSKGNYHS--VSITIN-----ATHIEQVETLYEELG 100 (109)
T ss_dssp CCCEEEEEEEECCTTHHHHHHHHHHHHSSSCCCE-EEEESSCSSEEE--EEEEEC-----CSSHHHHHHHHHHHS
T ss_pred CCCceEEEEEECcHHHHHHHHHHHHHhCCCCCCc-eecCCCCCeEEE--EEEEEE-----ECCHHHHHHHHHHHh
Confidence 456799999999999999999999998 7877 334444444333 333321 334577776666654
No 70
>1ib8_A Conserved protein SP14.3; nucleic acid binding protein, ribosomal protein, essential gene, structural genomics; NMR {Streptococcus pneumoniae} SCOP: b.38.2.1 d.52.4.1
Probab=42.12 E-value=1.4e+02 Score=24.39 Aligned_cols=55 Identities=11% Similarity=0.030 Sum_probs=36.8
Q ss_pred HHHHHHHHHHCCceEEEEEEEEeCCeEEEEEEEeecCCCCCCCChHHHHHHHHHHHHhhc
Q 022480 116 LIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLL 175 (296)
Q Consensus 116 La~i~~vL~~~glnI~~A~I~T~~~~~~d~F~V~~~~~g~~l~~~~~l~~L~~~L~~~L~ 175 (296)
..-+..++.. |+.+.+..+...+.+..=..+|... +|-.+ +.++.+.+.|...|+
T Consensus 15 ~~li~p~~~~-g~eLvdve~~~~g~~~~LrV~ID~~-~gi~l---ddC~~vSr~is~~LD 69 (164)
T 1ib8_A 15 REVVEPVIEA-PFELVDIEYGKIGSDMILSIFVDKP-EGITL---NDTADLTEMISPVLD 69 (164)
T ss_dssp HHHHHHHHCS-SSEEEEEEEEEETTEEEEEEEEECS-SCCCH---HHHHHHHHHHGGGTT
T ss_pred HHHHHHHHcC-CcEEEEEEEEecCCCcEEEEEEECC-CCCCH---HHHHHHHHHHHHHhc
Confidence 3445566667 9999999998887766434445542 45332 677778777777665
No 71
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=37.37 E-value=60 Score=31.14 Aligned_cols=51 Identities=14% Similarity=0.244 Sum_probs=37.5
Q ss_pred CCeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEeCCe-EEEEEEEee
Q 022480 100 SDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSV-KQTKFFITR 150 (296)
Q Consensus 100 ~~~t~V~V~~~DrpGLLa~i~~vL~~~glnI~~A~I~T~~~~-~~d~F~V~~ 150 (296)
..-|.|.+..+|+||-|+++.++|+.+|+|+.+-.-.-.... ..-.|+|.-
T Consensus 32 ~dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfVD~ 83 (429)
T 1phz_A 32 NGAISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYL 83 (429)
T ss_dssp SCCEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEECB
T ss_pred CCeEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEEEE
Confidence 345667777799999999999999999999976555544432 233477754
No 72
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=34.58 E-value=25 Score=33.67 Aligned_cols=107 Identities=15% Similarity=0.181 Sum_probs=0.0
Q ss_pred CCeEEEEEEe---CCCccHHHHHHHHHHHCCceEEEEEEEEeCCeEEEEEEEeecCCCCCCCChHHHHHHHHHHHHhhcc
Q 022480 100 SDATIVQLSF---GDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLK 176 (296)
Q Consensus 100 ~~~t~V~V~~---~DrpGLLa~i~~vL~~~glnI~~A~I~T~~~~~~d~F~V~~~~~g~~l~~~~~l~~L~~~L~~~L~~ 176 (296)
.+.+.|+|.+ .+.+|.++++.++|+++|++|.--. +....+. |.|... +...-.....++++...|.. +..
T Consensus 306 ~~~~~i~i~~~~m~~~~g~~~~if~~l~~~~i~vd~i~--ss~~sis--~~v~~~-~~~~~~~~~~~~~~~~el~~-~~~ 379 (449)
T 2j0w_A 306 RNQTLLTLHSLNMLHSRGFLAEVFGILARHNISVDLIT--TSEVSVA--LTLDTT-GSTSTGDTLLTQSLLMELSA-LCR 379 (449)
T ss_dssp EEEEEEEECCCSCSCHHHHHHHHTTTTTTTTCCCSEEE--EETTEEE--EEECCC-CCSSTTCCSSCHHHHHHHHH-HSC
T ss_pred CCEEEEEEEecCCCCccCHHHHHHHHHHHcCCCEEEEE--eCCCeEE--EEEecc-ccchhhHHHHHHHHHHHhcc-CCe
Q ss_pred cCCCchhHhhhccccCccCCCccccccccceeeeccCCCCcEEEEEEeC---CCcchHHHHHHHHHhCCceEEEE
Q 022480 177 YHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETA---DRPGLLVEIMKIIADVNVDVESA 248 (296)
Q Consensus 177 ~~~~~~~~La~~~~~~~~~~~r~~~~~~~~~V~v~~~~~~~TvleV~t~---DRPGLL~dIt~~La~~gv~I~~A 248 (296)
|.+.+ +...|.|.+. ..||+.+++..+|++ +||+..
T Consensus 380 -------------------------------v~~~~---~~a~vsvVG~gm~~~~gv~~~~f~aL~~--ini~mI 418 (449)
T 2j0w_A 380 -------------------------------VEVEE---GLALVALIGNDLSKACGVGKEVFGVLEP--FNIRMI 418 (449)
T ss_dssp -------------------------------EEEEE---EEEEEEEEESSCTTSSSHHHHHHSSCTT--SCCCEE
T ss_pred -------------------------------EEEeC---CeEEEEEECCCccccccHHHHHHHHHhC--CCeEEE
No 73
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=33.53 E-value=35 Score=32.81 Aligned_cols=48 Identities=19% Similarity=0.153 Sum_probs=36.5
Q ss_pred CcEEEEEEe---CCCcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEEEe
Q 022480 216 KRSLLYIET---ADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSY 265 (296)
Q Consensus 216 ~~TvleV~t---~DRPGLL~dIt~~La~~gv~I~~AkI~T~G~ra~D~F~V~~ 265 (296)
+.+.|.|.+ .++||++++|.++|+++||+|....-.|. + ..=.|.|..
T Consensus 317 ~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~ts-e-~~Is~~V~~ 367 (473)
T 3c1m_A 317 NVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSS-E-TNISLVVSE 367 (473)
T ss_dssp EEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCT-T-CCEEEEEEG
T ss_pred CeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecCC-C-CEEEEEEec
Confidence 467888886 68899999999999999999998876442 2 223466643
No 74
>4esb_A Transcriptional regulator, PADR family; DNA binding protein, HTH fold; 2.50A {Bacillus cereus}
Probab=33.02 E-value=42 Score=25.66 Aligned_cols=65 Identities=6% Similarity=0.009 Sum_probs=43.9
Q ss_pred CcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEEEeCCCCCChH---HHHHHHHHHHHHcCCCCCc
Q 022480 227 RPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGGAALNSS---LSQVLVNCLRYYLRRPETD 292 (296)
Q Consensus 227 RPGLL~dIt~~La~~gv~I~~AkI~T~G~ra~D~F~V~~~g~~L~~~---~~~~L~~~L~~~l~~~~~~ 292 (296)
.+|-||.+.+-|.+.|+-...- ....+++..-.|.+++.|...-.. ..+.+.+.+...+.....+
T Consensus 41 s~gtlY~~L~rLe~~GlI~~~~-~~~~~g~~rk~Y~LT~~G~~~l~~~~~~~~~~~~~i~~il~~~~~~ 108 (115)
T 4esb_A 41 SEGSIYPLLLRMQKEKLIEGTL-KASSLGPKRKYYHITDKGLEQLEEFKQSWGMVSTTVNNLLQGESRW 108 (115)
T ss_dssp CHHHHHHHHHHHHHTTSEEEEE-EECTTSCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHTTCC---
T ss_pred CcChHHHHHHHHHHCCCeEEEe-eecCCCCCcEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Confidence 4899999999999999854433 223455666678888877665444 4467777777777665544
No 75
>3ced_A Methionine import ATP-binding protein METN 2; ABC transporter, NIL domain, structur genomics, PSI-2, protein structure initiative; 2.15A {Staphylococcus aureus subsp} SCOP: d.58.18.13
Probab=30.94 E-value=1.6e+02 Score=21.70 Aligned_cols=39 Identities=8% Similarity=0.070 Sum_probs=32.7
Q ss_pred cchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEEEeCC
Q 022480 228 PGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGG 267 (296)
Q Consensus 228 PGLL~dIt~~La~~gv~I~~AkI~T~G~ra~D~F~V~~~g 267 (296)
..+++++++.+ ...+||.++.|...++...-.+.+.=.|
T Consensus 34 ~PvIs~l~~~~-~v~vnIL~g~I~~i~~~~~G~L~v~l~G 72 (98)
T 3ced_A 34 EPIVSSLSTAY-DIKINILEANIKNTKNGTVGFLVLHIPY 72 (98)
T ss_dssp HHHHHHHHHHH-TCCCEEEEEEEEEETTEEEEEEEEEESC
T ss_pred chHHHHHHHHH-CCcEEEEEEEeEEeCCEeEEEEEEEEeC
Confidence 45778888877 5789999999999999999988886555
No 76
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=30.58 E-value=51 Score=32.19 Aligned_cols=34 Identities=18% Similarity=0.450 Sum_probs=30.4
Q ss_pred CcEEEEEEe---CCCcchHHHHHHHHHhCCceEEEEE
Q 022480 216 KRSLLYIET---ADRPGLLVEIMKIIADVNVDVESAE 249 (296)
Q Consensus 216 ~~TvleV~t---~DRPGLL~dIt~~La~~gv~I~~Ak 249 (296)
+.+.|.|.+ .++||++++|..+|+++|++|....
T Consensus 340 ~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I~ 376 (510)
T 2cdq_A 340 NVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVVA 376 (510)
T ss_dssp EEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEEE
T ss_pred CeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEEE
Confidence 468888885 7899999999999999999999984
No 77
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=30.23 E-value=1.4e+02 Score=22.14 Aligned_cols=50 Identities=12% Similarity=0.088 Sum_probs=35.6
Q ss_pred CCeEEEEEEeCCCccHHHHHHHHHHHCCce-EEEEEEEEeCCeEEEEEEEeecCCCCCC
Q 022480 100 SDATIVQLSFGDRLGALIDTMNALKDLGLD-VAKGTVNTEGSVKQTKFFITRLDTGRKV 157 (296)
Q Consensus 100 ~~~t~V~V~~~DrpGLLa~i~~vL~~~gln-I~~A~I~T~~~~~~d~F~V~~~~~g~~l 157 (296)
.+++.+.+.+.| +..+...|...|+. +...-. ....+.. |++.++ +|+.+
T Consensus 65 ~~~~~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~-~~~~G~~--~~~~DP-dGn~i 115 (128)
T 3g12_A 65 IPSLQLGFQITD----LEKTVQELVKIPGAMCILDPT-DMPDGKK--AIVLDP-DGHSI 115 (128)
T ss_dssp CCSEEEEEEESC----HHHHHHHHTTSTTCEEEEEEE-ECC-CEE--EEEECT-TCCEE
T ss_pred CCceEEEEEeCC----HHHHHHHHHHCCCceeccCce-eCCCccE--EEEECC-CCCEE
Confidence 345678888888 88888999999999 765332 3333333 889996 89865
No 78
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=29.65 E-value=42 Score=26.89 Aligned_cols=32 Identities=9% Similarity=0.272 Sum_probs=25.5
Q ss_pred cEEEEEEeC---CCcchHHHHHHHHHhCCceEEEE
Q 022480 217 RSLLYIETA---DRPGLLVEIMKIIADVNVDVESA 248 (296)
Q Consensus 217 ~TvleV~t~---DRPGLL~dIt~~La~~gv~I~~A 248 (296)
.-.|+|.+. |-.|+++.|+..|++.||.|...
T Consensus 62 wr~i~v~~~l~~~~vGilA~is~pLA~agIsif~i 96 (134)
T 1zhv_A 62 WSCFKFQGPFAFDETGIVLSVISPLSTNGIGIFVV 96 (134)
T ss_dssp EEEEEECSCCCCSSCCHHHHHHHHHHTTTCCCEEE
T ss_pred eEEEEEecCCCccHHHHHHHHHHHHHhCCCCeEEE
Confidence 345555544 88999999999999999998653
No 79
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=28.74 E-value=1.6e+02 Score=21.83 Aligned_cols=48 Identities=13% Similarity=0.028 Sum_probs=34.5
Q ss_pred CcEEEEEEeCCCcchHHHHHHHHHhCCce-EEEEEEEecCCeeeeEEEEEe-CCCCC
Q 022480 216 KRSLLYIETADRPGLLVEIMKIIADVNVD-VESAEIDTEGLVAKDKFHVSY-GGAAL 270 (296)
Q Consensus 216 ~~TvleV~t~DRPGLL~dIt~~La~~gv~-I~~AkI~T~G~ra~D~F~V~~-~g~~L 270 (296)
.+..+.+.+.| +....+.|.+.|+. +...-.....+. - |+++| +|+.|
T Consensus 66 ~~~~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~~~~~G~--~-~~~~DPdGn~i 115 (128)
T 3g12_A 66 PSLQLGFQITD----LEKTVQELVKIPGAMCILDPTDMPDGK--K-AIVLDPDGHSI 115 (128)
T ss_dssp CSEEEEEEESC----HHHHHHHHTTSTTCEEEEEEEECC-CE--E-EEEECTTCCEE
T ss_pred CceEEEEEeCC----HHHHHHHHHHCCCceeccCceeCCCcc--E-EEEECCCCCEE
Confidence 36778888888 88999999999999 765433322222 2 88988 88865
No 80
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=28.62 E-value=43 Score=32.11 Aligned_cols=64 Identities=13% Similarity=0.180 Sum_probs=41.9
Q ss_pred CcEEEEEEe---CCCcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEEEe-CCCCCChHHHHHHHHHHHHHcC
Q 022480 216 KRSLLYIET---ADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSY-GGAALNSSLSQVLVNCLRYYLR 287 (296)
Q Consensus 216 ~~TvleV~t---~DRPGLL~dIt~~La~~gv~I~~AkI~T~G~ra~D~F~V~~-~g~~L~~~~~~~L~~~L~~~l~ 287 (296)
+.+.|.|.+ .+.||++++|..+|+++|++|.... + +. ..=.|.|.. +-.+ ..+++.+.|...+.
T Consensus 297 ~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i~--~-~~-~~is~~V~~~d~~~----~~~~~~~el~~~~~ 364 (446)
T 3tvi_A 297 NFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHMP--S-GV-DSVSLVIEDCKLDG----KCDKIIEEIKKQCN 364 (446)
T ss_dssp EEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEBC--E-ET-TEEEEEEEHHHHTT----THHHHHHHHHHHSC
T ss_pred CEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEEe--c-CC-CEEEEEEecchHHH----HHHHHHHHHHHhcC
Confidence 357788886 5999999999999999999998763 2 22 122466754 2111 23445555555543
No 81
>3dhx_A Methionine import ATP-binding protein METN; methionine uptake, regulation, amino-acid transport, ATP-BIN hydrolase, inner membrane, membrane; 2.10A {Escherichia coli} SCOP: d.58.18.13
Probab=27.96 E-value=1.6e+02 Score=21.89 Aligned_cols=40 Identities=33% Similarity=0.405 Sum_probs=31.7
Q ss_pred CCcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEEEeCC
Q 022480 226 DRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGG 267 (296)
Q Consensus 226 DRPGLL~dIt~~La~~gv~I~~AkI~T~G~ra~D~F~V~~~g 267 (296)
+.| +++++++.+ ...+||.++.|+..++...-.+.+.=.|
T Consensus 34 ~~P-iIs~l~~~~-~v~vnIL~g~I~~i~~~~~G~L~v~l~G 73 (106)
T 3dhx_A 34 DAP-LLSETARRF-NVNNNIISAQMDYAGGVKFGIMLTEMHG 73 (106)
T ss_dssp TCC-HHHHHHHHS-CCEEEEEEEEEEEETTEEEEEEEEEEES
T ss_pred Chh-HHHHHHHHH-CCCEEEEEEEeEEECCeeEEEEEEEEeC
Confidence 444 777777766 3668999999999999999999886455
No 82
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=27.32 E-value=3.9e+02 Score=25.92 Aligned_cols=141 Identities=12% Similarity=0.145 Sum_probs=77.8
Q ss_pred EEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEeCCeEEEEEEEeecCCCCCCCChHHHHHHHHHHHHhhcccCCCch
Q 022480 103 TIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLKYHPESS 182 (296)
Q Consensus 103 t~V~V~~~DrpGLLa~i~~vL~~~glnI~~A~I~T~~~~~~d~F~V~~~~~g~~l~~~~~l~~L~~~L~~~L~~~~~~~~ 182 (296)
..+.|.-+||||-|.+++.+|. +-||.+-.=.........+++..+- .+. ++..+.|.+.|.+. + ...
T Consensus 339 ~~~~v~~p~~pg~l~~~~~~l~--~~~i~~~~~~~~~~~~~~~~~~~e~-~~~----~~~~~~~~~~l~~~--g--~~~- 406 (514)
T 1tdj_A 339 ALLAVTIPEEKGSFLKFCQLLG--GRSVTEFNYRFADAKNACIFVGVRL-SRG----LEERKEILQMLNDG--G--YSV- 406 (514)
T ss_dssp EEEEEECCBSSSCSHHHHHTTS--SSEEEEEEEECCCSSBCEEEEEEEC-SST----HHHHHHHHHHHTSS--S--CEE-
T ss_pred ccccccCCCCCchHHHHHHHhC--CCceEEEEeeccCCCeEEEEEEEEe-CCc----HHHHHHHHHHHHhC--C--CCe-
Confidence 5678889999999999999987 6888775544322233344544442 121 35666666665541 1 110
Q ss_pred hHhhhccccCccCCCccccccccceeeeccCCCCcEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCC---eeee
Q 022480 183 EQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGL---VAKD 259 (296)
Q Consensus 183 ~~La~~~~~~~~~~~r~~~~~~~~~V~v~~~~~~~TvleV~t~DRPGLL~dIt~~La~~gv~I~~AkI~T~G~---ra~D 259 (296)
..|...+.-+ .+...+ +-.+- +...+--+...+=+.|||-|.++...|.. +-||...+-..+|. ++.-
T Consensus 407 ~~~~~~~~~~----~h~~~~-~g~~~---~~~~~e~~~~~~fpe~~gal~~fl~~~~~-~~~i~~~~yr~~g~~~~~~~~ 477 (514)
T 1tdj_A 407 VDLSDDEMAK----LHVRYM-VGGRP---SHPLQERLYSFEFPESPGALLRFLNTLGT-YWNISLFHYRSHGTDYGRVLA 477 (514)
T ss_dssp ETTSSCHHHH----HTGGGT-CCCCC---SSCCCCEEEEEECCCCTTHHHHHHHHHCS-CCCCCEEECBCTTTCSSCEEE
T ss_pred EECCCCHHHH----HHHHHh-hCCcC---ccCCCceEEEEeCCCCCCHHHHHHHhcCC-CceEEEEeecCCCCCcccEEE
Confidence 0010000000 000001 11100 00123466778899999999999999985 67887777777773 4444
Q ss_pred EEEEE
Q 022480 260 KFHVS 264 (296)
Q Consensus 260 ~F~V~ 264 (296)
-|.+.
T Consensus 478 ~~~~~ 482 (514)
T 1tdj_A 478 AFELG 482 (514)
T ss_dssp EEC--
T ss_pred EEEcC
Confidence 45553
No 83
>3dhx_A Methionine import ATP-binding protein METN; methionine uptake, regulation, amino-acid transport, ATP-BIN hydrolase, inner membrane, membrane; 2.10A {Escherichia coli} SCOP: d.58.18.13
Probab=25.73 E-value=2.1e+02 Score=21.31 Aligned_cols=36 Identities=14% Similarity=0.215 Sum_probs=28.6
Q ss_pred cHHHHHHHHHHHCCceEEEEEEEEeCCeEEEEEEEee
Q 022480 114 GALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITR 150 (296)
Q Consensus 114 GLLa~i~~vL~~~glnI~~A~I~T~~~~~~d~F~V~~ 150 (296)
.+++++++-+ ...+||+.|.|...++.....++|.-
T Consensus 36 PiIs~l~~~~-~v~vnIL~g~I~~i~~~~~G~L~v~l 71 (106)
T 3dhx_A 36 PLLSETARRF-NVNNNIISAQMDYAGGVKFGIMLTEM 71 (106)
T ss_dssp CHHHHHHHHS-CCEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred hHHHHHHHHH-CCCEEEEEEEeEEECCeeEEEEEEEE
Confidence 3777776665 46689999999999998887787776
No 84
>2qsw_A Methionine import ATP-binding protein METN 2; ABC transporter, structural genomics, APC87322.1, PSI-2, protein structure initiative; 1.50A {Enterococcus faecalis} SCOP: d.58.18.13
Probab=24.76 E-value=2.1e+02 Score=20.93 Aligned_cols=40 Identities=15% Similarity=0.199 Sum_probs=33.0
Q ss_pred CcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEEEeCC
Q 022480 227 RPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGG 267 (296)
Q Consensus 227 RPGLL~dIt~~La~~gv~I~~AkI~T~G~ra~D~F~V~~~g 267 (296)
...+++++++.| ...+||.++.|...+++..-.+.+.=.|
T Consensus 36 ~~pvis~l~~~~-~v~vnIl~g~i~~i~~~~~G~L~v~l~G 75 (100)
T 2qsw_A 36 KLPIISHIVQEY-QVEVSIIQGNIQQTKQGAVGSLYIQLLG 75 (100)
T ss_dssp SSCHHHHHHHHH-TCEEEEEEEEEEEETTEEEEEEEEEEES
T ss_pred CchHHHHHHHHh-CCCEEEEEeeceEcCCeeEEEEEEEEEC
Confidence 346788888877 5789999999999999999988886445
No 85
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=22.47 E-value=58 Score=26.00 Aligned_cols=32 Identities=16% Similarity=0.236 Sum_probs=25.5
Q ss_pred cEEEEEEe---CCCcchHHHHHHHHHhCCceEEEE
Q 022480 217 RSLLYIET---ADRPGLLVEIMKIIADVNVDVESA 248 (296)
Q Consensus 217 ~TvleV~t---~DRPGLL~dIt~~La~~gv~I~~A 248 (296)
...|+|.+ -|-.|+++.|+..|++.||.|...
T Consensus 71 wr~i~l~~~~~l~~vGi~a~is~~LA~agIsif~i 105 (133)
T 1zvp_A 71 FSLITLTVHSSLEAVGLTAAFATKLAEHGISANVI 105 (133)
T ss_dssp EEEEEEECCC--CCSCHHHHHHHHHHHTTCCCEEE
T ss_pred eEEEEEeccCCccHHHHHHHHHHHHHhCCCCcEEE
Confidence 45555554 699999999999999999998653
No 86
>3f8b_A Transcriptional regulator, PADR-like family; winged helix turn helix, transcription regulator; 2.00A {Lactococcus lactis subsp} SCOP: a.4.5.0 PDB: 3f8c_A* 3f8f_A*
Probab=20.16 E-value=66 Score=24.47 Aligned_cols=65 Identities=8% Similarity=-0.034 Sum_probs=39.9
Q ss_pred CcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEEEeCCCCCChH---HHHHHHHHHHHHcCCCCCc
Q 022480 227 RPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGGAALNSS---LSQVLVNCLRYYLRRPETD 292 (296)
Q Consensus 227 RPGLL~dIt~~La~~gv~I~~AkI~T~G~ra~D~F~V~~~g~~L~~~---~~~~L~~~L~~~l~~~~~~ 292 (296)
.+|-||.+.+-|.+.|+--..-. ...+++..-.|.+++.|...-.. ..+++.+.+...+....++
T Consensus 46 ~~gtly~~L~rLe~~GlI~~~~~-~~~~~~~rk~Y~LT~~G~~~l~~~~~~~~~~~~~i~~il~~~~~~ 113 (116)
T 3f8b_A 46 NEATLYTIFKRLEKDGIISSYWG-DESQGGRRKYYRLTEIGHENMRLAFESWSRVDKIIENLEANKKSE 113 (116)
T ss_dssp CHHHHHHHHHHHHHTTSEEEEEE-C----CCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCC----
T ss_pred CcchHHHHHHHHHHCCCEEEEee-ccCCCCCceEEEECHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
Confidence 37999999999999998544322 12344556677888877655443 3456667777777655443
Done!