Query 022481
Match_columns 296
No_of_seqs 523 out of 3065
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 06:10:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022481.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022481hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.9 1.5E-26 5.1E-31 188.4 12.4 95 198-292 70-164 (169)
2 4gpm_A Engineered protein OR26 99.9 1E-26 3.5E-31 189.3 10.9 125 164-295 10-134 (169)
3 1n0q_A 3ANK, 3 ankyrin repeats 99.9 7.8E-25 2.7E-29 159.9 11.6 92 198-289 2-93 (93)
4 2y1l_E Darpin-8.4; hydrolase-i 99.9 5.1E-25 1.7E-29 178.5 8.0 130 159-295 15-144 (169)
5 3aaa_C Myotrophin, protein V-1 99.9 2.5E-23 8.4E-28 159.7 12.8 99 197-295 6-104 (123)
6 1bi7_B P16INK4A, MTS1, multipl 99.9 1.6E-24 5.4E-29 173.4 5.6 126 162-295 16-142 (156)
7 2jab_A H10-2-G3; HER2, darpin, 99.9 1.5E-23 5.1E-28 163.8 10.6 120 161-287 17-136 (136)
8 4b93_B Ankyrin repeat domain-c 99.9 1.5E-23 5.3E-28 183.0 11.8 127 162-295 90-216 (269)
9 1d9s_A Cyclin-dependent kinase 99.9 2.2E-24 7.4E-29 168.6 5.7 120 162-289 16-136 (136)
10 3c5r_A BARD-1, BRCA1-associate 99.9 4.4E-23 1.5E-27 161.2 13.1 98 198-295 10-107 (137)
11 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.3E-23 4.4E-28 179.9 10.7 126 162-295 9-134 (239)
12 1awc_B Protein (GA binding pro 99.9 1.6E-23 5.5E-28 166.7 10.4 120 168-295 12-131 (153)
13 3v30_A DNA-binding protein rfx 99.9 1.4E-23 4.7E-28 170.2 9.9 122 167-295 11-133 (172)
14 3twr_A Tankyrase-2; ankyrin re 99.9 5.1E-23 1.8E-27 165.6 13.2 121 168-295 18-139 (165)
15 3f6q_A Integrin-linked protein 99.9 3.3E-23 1.1E-27 169.3 12.0 119 169-294 16-135 (179)
16 3v31_A Ankyrin repeat family A 99.9 2.6E-23 9E-28 167.7 11.0 124 165-295 10-133 (167)
17 1x4u_A Zinc finger, FYVE domai 99.9 4E-24 1.4E-28 152.7 5.3 70 2-71 5-80 (84)
18 2vge_A RELA-associated inhibit 99.9 6.4E-23 2.2E-27 174.8 13.4 123 165-294 28-153 (229)
19 2rfm_A Putative ankyrin repeat 99.9 3.4E-23 1.2E-27 171.0 10.9 124 165-295 42-165 (192)
20 2jab_A H10-2-G3; HER2, darpin, 99.9 8.5E-23 2.9E-27 159.5 12.3 99 197-295 13-111 (136)
21 1d9s_A Cyclin-dependent kinase 99.9 4.3E-23 1.5E-27 161.2 10.4 106 182-295 3-109 (136)
22 1ihb_A P18-INK4C(INK6), cyclin 99.9 5.5E-23 1.9E-27 164.7 11.2 114 169-289 48-162 (162)
23 1n0r_A 4ANK, 4 ankyrin repeats 99.9 5.3E-23 1.8E-27 157.3 10.1 114 169-289 13-126 (126)
24 2l6b_A NR1C; ankyrin, consensu 99.9 1.3E-23 4.3E-28 159.3 6.5 99 197-295 8-106 (115)
25 1z2q_A LM5-1; membrane protein 99.9 4.6E-24 1.6E-28 152.3 3.8 69 2-70 12-80 (84)
26 1ihb_A P18-INK4C(INK6), cyclin 99.9 6.2E-23 2.1E-27 164.4 10.5 121 167-295 14-135 (162)
27 2vge_A RELA-associated inhibit 99.9 2.5E-23 8.7E-28 177.3 7.3 117 174-294 1-117 (229)
28 3f6q_A Integrin-linked protein 99.9 1E-22 3.6E-27 166.2 10.4 126 162-294 43-168 (179)
29 1oy3_D Transcription factor in 99.9 2.3E-22 7.8E-27 174.9 12.8 98 198-295 158-256 (282)
30 3v30_A DNA-binding protein rfx 99.9 5.8E-23 2E-27 166.5 7.5 126 162-294 40-165 (172)
31 4b93_B Ankyrin repeat domain-c 99.9 3.7E-22 1.3E-26 174.2 12.2 117 172-295 67-183 (269)
32 3twr_A Tankyrase-2; ankyrin re 99.9 3.3E-22 1.1E-26 160.9 10.4 119 162-288 46-164 (165)
33 3aji_A 26S proteasome non-ATPa 99.9 5.7E-22 2E-26 167.8 12.0 124 165-295 80-203 (231)
34 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1E-22 3.6E-27 174.3 7.5 126 162-294 41-169 (239)
35 1ikn_D Protein (I-kappa-B-alph 99.9 8.1E-22 2.8E-26 167.8 13.0 125 163-294 50-181 (236)
36 2dzn_A Probable 26S proteasome 99.9 6.1E-22 2.1E-26 167.1 12.0 124 165-295 79-206 (228)
37 2yw8_A RUN and FYVE domain-con 99.9 3.6E-23 1.2E-27 147.0 3.3 67 3-71 11-77 (82)
38 1yyh_A HN1;, notch 1, ankyrin 99.9 3.4E-22 1.2E-26 172.3 10.1 122 167-295 99-221 (253)
39 2y1l_E Darpin-8.4; hydrolase-i 99.9 5.9E-22 2E-26 160.3 10.9 118 163-287 52-169 (169)
40 3lvq_E ARF-GAP with SH3 domain 99.9 3.2E-22 1.1E-26 189.3 10.1 131 162-293 136-269 (497)
41 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.6E-21 5.4E-26 149.0 12.0 98 198-295 2-99 (126)
42 2rfa_A Transient receptor pote 99.9 1E-21 3.6E-26 166.4 11.7 120 168-294 13-151 (232)
43 3deo_A Signal recognition part 99.9 1.1E-21 3.9E-26 160.9 11.2 99 196-295 42-141 (183)
44 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1E-21 3.5E-26 156.4 10.6 113 166-286 43-155 (156)
45 1bd8_A P19INK4D CDK4/6 inhibit 99.9 9E-22 3.1E-26 156.7 10.1 118 169-295 13-131 (156)
46 2f8y_A Notch homolog 1, transl 99.9 1.4E-21 4.9E-26 164.5 11.7 120 168-294 68-188 (223)
47 3ehr_A Osteoclast-stimulating 99.9 1.3E-21 4.4E-26 165.2 11.0 99 197-295 72-171 (222)
48 1s70_B 130 kDa myosin-binding 99.9 1.5E-21 5.1E-26 171.6 11.8 127 162-295 77-263 (299)
49 1bi7_B P16INK4A, MTS1, multipl 99.9 6.2E-22 2.1E-26 158.2 8.0 98 197-295 11-109 (156)
50 3ehr_A Osteoclast-stimulating 99.9 3E-22 1E-26 169.1 6.4 121 167-294 82-203 (222)
51 3b7b_A Euchromatic histone-lys 99.9 2.7E-21 9.4E-26 164.2 12.4 125 164-295 83-208 (237)
52 3t8k_A Uncharacterized protein 99.9 9.2E-22 3.1E-26 162.5 9.1 98 198-295 38-152 (186)
53 1awc_B Protein (GA binding pro 99.9 2E-21 6.8E-26 154.6 10.6 113 164-283 40-152 (153)
54 3aji_A 26S proteasome non-ATPa 99.9 2.5E-21 8.6E-26 163.8 11.8 124 165-295 47-170 (231)
55 1dcq_A PYK2-associated protein 99.9 1.4E-21 4.7E-26 171.5 10.4 122 168-290 140-264 (278)
56 1yyh_A HN1;, notch 1, ankyrin 99.9 1.5E-21 5E-26 168.2 10.3 127 162-295 61-188 (253)
57 1k1a_A B-cell lymphoma 3-encod 99.9 2.2E-21 7.5E-26 164.9 11.2 124 165-295 86-214 (241)
58 3v31_A Ankyrin repeat family A 99.9 9.6E-22 3.3E-26 158.5 8.2 123 162-291 40-162 (167)
59 3hra_A Ankyrin repeat family p 99.9 2.9E-21 9.9E-26 160.0 11.1 124 165-295 46-176 (201)
60 3t7l_A Zinc finger FYVE domain 99.9 1.7E-22 5.9E-27 145.9 3.2 72 2-75 11-82 (90)
61 3ui2_A Signal recognition part 99.9 2.4E-21 8.2E-26 166.5 10.9 99 196-295 43-142 (244)
62 1wdy_A 2-5A-dependent ribonucl 99.8 3.5E-21 1.2E-25 167.1 11.9 125 165-296 155-285 (285)
63 1n11_A Ankyrin; clathrin, BAND 99.8 2.6E-21 8.8E-26 179.3 11.6 124 165-295 252-375 (437)
64 1vfy_A Phosphatidylinositol-3- 99.8 1.1E-22 3.9E-27 141.1 1.8 64 3-69 6-69 (73)
65 1oy3_D Transcription factor in 99.8 1.8E-21 6.3E-26 169.1 9.9 125 164-295 51-223 (282)
66 2rfm_A Putative ankyrin repeat 99.8 1.6E-21 5.6E-26 160.8 9.0 118 163-287 73-190 (192)
67 3jxi_A Vanilloid receptor-rela 99.8 4.7E-22 1.6E-26 171.6 5.8 125 167-291 58-212 (260)
68 3t8k_A Uncharacterized protein 99.8 2E-22 7E-27 166.4 3.1 117 172-295 56-185 (186)
69 2f8y_A Notch homolog 1, transl 99.8 1.2E-20 4.1E-25 158.8 14.0 128 161-295 28-156 (223)
70 3c5r_A BARD-1, BRCA1-associate 99.8 6.8E-22 2.3E-26 154.3 5.9 118 165-289 17-134 (137)
71 2etb_A Transient receptor pote 99.8 1E-21 3.5E-26 169.2 7.2 127 169-295 57-219 (256)
72 2xai_A ASB-9, ankyrin repeat a 99.8 4.9E-21 1.7E-25 165.8 11.5 115 169-291 47-161 (261)
73 2xai_A ASB-9, ankyrin repeat a 99.8 4.3E-21 1.5E-25 166.2 10.7 123 164-295 75-197 (261)
74 3jue_A Arfgap with coiled-coil 99.8 1.5E-21 5.1E-26 177.6 7.9 118 165-289 206-326 (368)
75 2rfa_A Transient receptor pote 99.8 4.9E-21 1.7E-25 162.3 10.6 123 162-291 41-185 (232)
76 1s70_B 130 kDa myosin-binding 99.8 4.4E-21 1.5E-25 168.6 10.7 127 162-295 44-230 (299)
77 2zgd_A 3 repeat synthetic anky 99.8 9.3E-21 3.2E-25 142.7 11.0 87 197-283 23-109 (110)
78 2pnn_A Transient receptor pote 99.8 1.3E-21 4.4E-26 170.3 6.7 132 161-292 104-262 (273)
79 3utm_A Tankyrase-1; tankyrase, 99.8 1.2E-20 4E-25 168.8 13.2 121 168-295 34-155 (351)
80 3hra_A Ankyrin repeat family p 99.8 5.5E-21 1.9E-25 158.2 10.1 124 165-295 12-138 (201)
81 3aaa_C Myotrophin, protein V-1 99.8 2.4E-21 8.2E-26 148.5 7.4 108 165-279 14-121 (123)
82 2b0o_E UPLC1; arfgap, structur 99.8 2.2E-21 7.6E-26 172.0 8.1 129 162-291 155-286 (301)
83 1ikn_D Protein (I-kappa-B-alph 99.8 1.3E-20 4.4E-25 160.3 12.4 127 162-295 12-148 (236)
84 3utm_A Tankyrase-1; tankyrase, 99.8 6.5E-21 2.2E-25 170.5 11.0 134 162-295 128-311 (351)
85 4hbd_A KN motif and ankyrin re 99.8 3.3E-21 1.1E-25 168.6 8.6 124 163-286 116-272 (276)
86 4g8k_A 2-5A-dependent ribonucl 99.8 5.2E-21 1.8E-25 171.4 10.1 110 172-293 220-330 (337)
87 1sw6_A Regulatory protein SWI6 99.8 1.1E-20 3.6E-25 169.4 11.8 117 172-295 111-314 (327)
88 3jxi_A Vanilloid receptor-rela 99.8 1.5E-21 5E-26 168.5 5.6 130 161-290 96-251 (260)
89 3ljn_A Hypothetical protein; a 99.8 1.2E-21 4.1E-26 177.4 5.3 120 165-291 145-271 (364)
90 3b7b_A Euchromatic histone-lys 99.8 1.9E-20 6.5E-25 159.0 12.2 125 164-295 50-175 (237)
91 2dzn_A Probable 26S proteasome 99.8 1.3E-20 4.3E-25 159.0 11.0 126 163-295 41-172 (228)
92 2etb_A Transient receptor pote 99.8 1.8E-21 6.1E-26 167.7 5.8 130 161-290 93-247 (256)
93 3d9h_A CDNA FLJ77766, highly s 99.8 1.3E-20 4.4E-25 165.4 11.2 121 166-295 133-253 (285)
94 1joc_A EEA1, early endosomal a 99.8 1.1E-21 3.8E-26 150.2 3.8 64 3-68 61-124 (125)
95 4hbd_A KN motif and ankyrin re 99.8 9.9E-21 3.4E-25 165.5 9.5 99 197-295 144-248 (276)
96 3ljn_A Hypothetical protein; a 99.8 3.5E-21 1.2E-25 174.3 6.7 134 162-295 88-242 (364)
97 1k1a_A B-cell lymphoma 3-encod 99.8 2.5E-20 8.4E-25 158.4 11.5 126 163-295 51-181 (241)
98 1wdy_A 2-5A-dependent ribonucl 99.8 3E-20 1E-24 161.2 12.1 120 167-293 14-134 (285)
99 3d9h_A CDNA FLJ77766, highly s 99.8 1.8E-20 6.3E-25 164.5 10.7 123 164-294 65-187 (285)
100 1wfk_A Zinc finger, FYVE domai 99.8 3.7E-21 1.3E-25 137.9 5.0 64 8-72 6-69 (88)
101 3deo_A Signal recognition part 99.8 3E-20 1E-24 152.4 9.9 116 163-286 49-181 (183)
102 3ui2_A Signal recognition part 99.8 1.4E-20 4.7E-25 161.7 8.1 120 162-289 49-185 (244)
103 3kea_A K1L; tropism, ANK repea 99.8 1E-20 3.5E-25 166.2 7.0 119 164-291 37-156 (285)
104 3kea_A K1L; tropism, ANK repea 99.8 8.7E-21 3E-25 166.6 6.1 125 161-293 65-190 (285)
105 2pnn_A Transient receptor pote 99.8 1.7E-20 5.7E-25 163.2 7.8 133 160-295 15-182 (273)
106 4g8k_A 2-5A-dependent ribonucl 99.8 4E-20 1.4E-24 165.6 10.5 124 164-294 174-303 (337)
107 1n11_A Ankyrin; clathrin, BAND 99.8 4.6E-20 1.6E-24 170.8 10.7 124 165-295 219-342 (437)
108 2fo1_E LIN-12 protein; beta-ba 99.8 6E-20 2.1E-24 167.3 9.4 98 198-295 235-344 (373)
109 3eu9_A Huntingtin-interacting 99.8 1.9E-19 6.6E-24 152.3 11.8 126 163-295 14-140 (240)
110 3jue_A Arfgap with coiled-coil 99.8 1.9E-19 6.4E-24 163.8 11.8 98 198-295 199-299 (368)
111 3eu9_A Huntingtin-interacting 99.8 1.6E-19 5.3E-24 152.9 9.5 121 167-294 85-207 (240)
112 2fo1_E LIN-12 protein; beta-ba 99.8 2.6E-19 9E-24 163.0 10.8 125 161-292 128-266 (373)
113 3lvq_E ARF-GAP with SH3 domain 99.8 7.7E-19 2.6E-23 166.0 12.3 96 200-295 134-238 (497)
114 2b0o_E UPLC1; arfgap, structur 99.8 9E-19 3.1E-23 155.2 11.9 96 200-295 153-257 (301)
115 3zyq_A Hepatocyte growth facto 99.8 5.5E-20 1.9E-24 155.7 3.3 69 3-71 156-224 (226)
116 1dcq_A PYK2-associated protein 99.8 2E-18 6.8E-23 151.3 12.7 97 199-295 131-236 (278)
117 1dvp_A HRS, hepatocyte growth 99.8 1.3E-19 4.4E-24 153.2 3.0 64 3-69 156-219 (220)
118 1y02_A CARP2, FYVE-ring finger 99.8 1E-19 3.5E-24 137.0 0.9 61 2-70 10-70 (120)
119 1sw6_A Regulatory protein SWI6 99.7 5.5E-18 1.9E-22 151.6 3.8 127 169-295 30-199 (327)
120 2l6b_A NR1C; ankyrin, consensu 99.7 2.2E-17 7.7E-22 124.5 3.9 95 167-268 18-112 (115)
121 1n0q_A 3ANK, 3 ankyrin repeats 99.7 1.3E-16 4.5E-21 115.8 7.4 82 168-256 12-93 (93)
122 2aja_A Ankyrin repeat family p 99.6 6.5E-18 2.2E-22 154.1 -2.2 123 161-288 95-223 (376)
123 3mpx_A FYVE, rhogef and PH dom 99.6 6.5E-17 2.2E-21 150.3 0.0 67 3-70 367-433 (434)
124 2aja_A Ankyrin repeat family p 99.6 2.6E-16 9.1E-21 143.4 2.0 93 199-292 93-191 (376)
125 2zgd_A 3 repeat synthetic anky 99.6 4.2E-15 1.4E-19 111.4 7.1 72 224-295 17-88 (110)
126 1zbd_B Rabphilin-3A; G protein 96.9 0.00036 1.2E-08 53.3 2.4 54 10-67 54-108 (134)
127 2zet_C Melanophilin; complex, 96.6 0.00065 2.2E-08 53.1 1.9 50 10-66 67-117 (153)
128 1wff_A Riken cDNA 2810002D23 p 96.3 0.0035 1.2E-07 43.3 3.6 31 9-41 23-53 (85)
129 1wfh_A Zinc finger (AN1-like) 96.2 0.0038 1.3E-07 40.6 3.3 33 6-41 10-42 (64)
130 3ky9_A Proto-oncogene VAV; cal 95.9 0.0018 6.2E-08 61.9 0.9 41 4-44 522-563 (587)
131 1wfl_A Zinc finger protein 216 95.5 0.0086 2.9E-07 40.1 2.8 29 10-41 24-52 (74)
132 1wfp_A Zinc finger (AN1-like) 95.5 0.012 4.1E-07 39.4 3.5 30 9-41 23-52 (74)
133 1wg2_A Zinc finger (AN1-like) 95.3 0.011 3.7E-07 38.5 2.7 31 8-41 12-42 (64)
134 2csz_A Synaptotagmin-like prot 95.2 0.0049 1.7E-07 41.7 0.9 50 10-67 24-74 (76)
135 1x4w_A Hypothetical protein FL 92.7 0.027 9.2E-07 37.0 0.6 32 9-41 13-45 (67)
136 1z60_A TFIIH basal transcripti 92.7 0.0039 1.3E-07 40.2 -3.4 29 13-42 17-45 (59)
137 2e72_A POGO transposable eleme 91.9 0.024 8.3E-07 34.3 -0.4 32 5-37 7-40 (49)
138 2a20_A Regulating synaptic mem 91.3 0.13 4.5E-06 32.6 2.5 54 8-66 6-60 (62)
139 2jrp_A Putative cytoplasmic pr 90.9 0.13 4.4E-06 35.2 2.3 58 12-71 3-65 (81)
140 2ect_A Ring finger protein 126 87.5 0.35 1.2E-05 32.5 2.7 53 9-70 13-65 (78)
141 2ecm_A Ring finger and CHY zin 86.4 0.34 1.2E-05 30.0 1.9 51 9-67 3-53 (55)
142 4gzn_C ZFP-57, zinc finger pro 85.8 0.26 8.8E-06 31.6 1.1 28 11-38 4-43 (60)
143 1iym_A EL5; ring-H2 finger, ub 85.6 0.45 1.6E-05 29.4 2.2 50 9-66 3-52 (55)
144 2djb_A Polycomb group ring fin 85.4 0.15 5.2E-06 33.8 -0.1 52 8-70 12-63 (72)
145 1bor_A Transcription factor PM 85.4 0.68 2.3E-05 29.0 3.0 46 8-68 3-48 (56)
146 2ysl_A Tripartite motif-contai 84.7 0.12 4.3E-06 34.2 -0.9 52 9-69 18-69 (73)
147 2ep4_A Ring finger protein 24; 84.5 0.13 4.4E-06 34.3 -0.9 53 9-70 13-65 (74)
148 2egp_A Tripartite motif-contai 84.1 0.26 8.9E-06 33.1 0.6 56 9-69 10-65 (79)
149 2jne_A Hypothetical protein YF 83.8 0.44 1.5E-05 33.5 1.6 58 12-71 33-95 (101)
150 2lv2_A Insulinoma-associated p 83.8 0.39 1.3E-05 33.2 1.4 28 10-37 27-66 (85)
151 2ecn_A Ring finger protein 141 83.8 0.21 7.3E-06 32.8 0.0 50 9-71 13-62 (70)
152 2yur_A Retinoblastoma-binding 81.5 0.44 1.5E-05 31.7 0.9 50 9-67 13-62 (74)
153 3lrq_A E3 ubiquitin-protein li 81.2 0.11 3.6E-06 37.2 -2.5 48 11-68 22-69 (100)
154 2ct7_A Ring finger protein 31; 80.9 0.93 3.2E-05 31.3 2.4 34 10-43 24-59 (86)
155 1twf_L ABC10-alpha, DNA-direct 80.5 0.53 1.8E-05 31.3 1.0 26 12-37 29-56 (70)
156 2d8t_A Dactylidin, ring finger 80.5 0.13 4.5E-06 34.0 -2.0 50 9-70 13-62 (71)
157 2lce_A B-cell lymphoma 6 prote 79.8 0.9 3.1E-05 29.7 2.0 29 9-37 15-55 (74)
158 1x4v_A Hypothetical protein LO 79.5 0.93 3.2E-05 29.4 1.9 28 10-40 11-40 (63)
159 2ecy_A TNF receptor-associated 79.4 0.15 5E-06 33.2 -2.1 50 9-69 13-62 (66)
160 2ea6_A Ring finger protein 4; 79.3 0.11 3.8E-06 34.0 -2.7 53 8-68 12-67 (69)
161 3uk3_C Zinc finger protein 217 78.2 0.77 2.7E-05 28.0 1.2 27 11-37 4-42 (57)
162 1wys_A Riken cDNA 2310008M20 p 78.1 1.1 3.9E-05 30.1 2.1 29 11-42 14-44 (75)
163 2ct2_A Tripartite motif protei 76.7 1 3.5E-05 30.7 1.6 56 9-69 13-68 (88)
164 1vd4_A Transcription initiatio 75.6 0.63 2.1E-05 29.5 0.2 12 11-22 14-25 (62)
165 1bbo_A Human enhancer-binding 75.6 1 3.5E-05 27.5 1.2 10 13-22 3-12 (57)
166 2ysj_A Tripartite motif-contai 75.1 0.82 2.8E-05 29.1 0.7 34 9-46 18-51 (63)
167 3j20_Y 30S ribosomal protein S 74.9 1.1 3.8E-05 27.5 1.2 27 11-37 19-47 (50)
168 2adr_A ADR1; transcription reg 74.1 1.1 3.7E-05 27.7 1.1 11 12-22 3-13 (60)
169 3l11_A E3 ubiquitin-protein li 73.3 0.48 1.7E-05 34.5 -0.9 51 8-69 12-62 (115)
170 2kiz_A E3 ubiquitin-protein li 73.1 0.49 1.7E-05 30.9 -0.8 53 9-70 12-64 (69)
171 2ecv_A Tripartite motif-contai 72.8 1.9 6.5E-05 29.0 2.2 55 9-69 17-71 (85)
172 1x5w_A Zinc finger protein 64, 72.6 1.1 3.9E-05 28.8 0.9 13 10-22 8-20 (70)
173 1jm7_B BARD1, BRCA1-associated 72.2 1 3.4E-05 32.9 0.6 45 11-68 22-66 (117)
174 1x6e_A Zinc finger protein 24; 72.0 1.2 4.1E-05 28.9 0.9 13 10-22 13-25 (72)
175 1wfe_A Riken cDNA 2310008M20 p 71.3 1.5 5.1E-05 30.3 1.3 29 10-41 24-54 (86)
176 1v87_A Deltex protein 2; ring- 70.4 0.68 2.3E-05 33.6 -0.7 57 11-70 25-95 (114)
177 3fl2_A E3 ubiquitin-protein li 70.4 0.32 1.1E-05 36.1 -2.5 47 12-69 53-99 (124)
178 1x4j_A Ring finger protein 38; 69.9 1.9 6.5E-05 28.5 1.6 51 9-68 21-71 (75)
179 2cot_A Zinc finger protein 435 68.9 3 0.0001 27.2 2.5 13 10-22 17-29 (77)
180 1vq8_Z 50S ribosomal protein L 67.9 1.7 5.9E-05 29.8 1.0 30 11-40 27-58 (83)
181 2eps_A POZ-, at HOOK-, and zin 67.9 1.6 5.6E-05 26.5 0.9 13 10-22 11-23 (54)
182 3cc2_Z 50S ribosomal protein L 67.8 1.7 5.8E-05 31.7 1.0 29 12-40 61-91 (116)
183 2gmg_A Hypothetical protein PF 67.3 1.9 6.6E-05 30.8 1.2 12 26-37 66-77 (105)
184 3ng2_A RNF4, snurf, ring finge 67.0 1.1 3.6E-05 29.2 -0.2 54 8-69 7-63 (71)
185 1jm7_A BRCA1, breast cancer ty 66.2 0.6 2.1E-05 33.6 -1.7 50 11-69 21-70 (112)
186 1chc_A Equine herpes virus-1 r 66.0 2.7 9.1E-05 27.0 1.7 48 10-68 4-51 (68)
187 2gqj_A Zinc finger protein KIA 65.4 0.98 3.4E-05 31.5 -0.7 12 11-22 24-35 (98)
188 4ayb_P DNA-directed RNA polyme 65.0 2.8 9.6E-05 25.1 1.4 25 12-36 4-32 (48)
189 2epr_A POZ-, at HOOK-, and zin 64.6 2.1 7.3E-05 25.0 0.9 13 10-22 11-23 (48)
190 2d9h_A Zinc finger protein 692 64.4 2.5 8.5E-05 27.7 1.3 13 10-22 6-18 (78)
191 2ct1_A Transcriptional repress 64.4 2.1 7.3E-05 28.0 0.9 13 10-22 14-26 (77)
192 2ecl_A Ring-box protein 2; RNF 63.5 2.6 8.9E-05 28.5 1.3 57 4-68 8-75 (81)
193 2ctu_A Zinc finger protein 483 63.5 2.5 8.7E-05 26.9 1.2 29 11-39 18-51 (73)
194 2ecw_A Tripartite motif-contai 62.3 0.95 3.2E-05 30.5 -1.2 55 9-69 17-71 (85)
195 2l0b_A E3 ubiquitin-protein li 61.7 2.4 8.4E-05 29.3 0.9 50 10-68 39-88 (91)
196 3j21_g 50S ribosomal protein L 61.3 2.9 0.0001 25.8 1.1 23 12-36 15-37 (51)
197 2ecj_A Tripartite motif-contai 61.1 2 7E-05 26.5 0.4 33 9-45 13-45 (58)
198 2drp_A Protein (tramtrack DNA- 60.7 2.7 9.3E-05 26.4 0.9 12 11-22 10-21 (66)
199 1wig_A KIAA1808 protein; LIM d 60.3 8.2 0.00028 25.2 3.3 58 11-71 5-67 (73)
200 2csy_A Zinc finger protein 183 60.3 2.4 8.2E-05 28.4 0.6 47 10-68 14-60 (81)
201 1vq8_1 50S ribosomal protein L 59.9 3.9 0.00013 25.6 1.5 16 21-36 9-26 (57)
202 2lt7_A Transcriptional regulat 59.3 2.8 9.6E-05 31.3 0.9 26 12-37 23-60 (133)
203 2epq_A POZ-, at HOOK-, and zin 59.1 3.2 0.00011 23.7 1.0 12 11-22 10-21 (45)
204 2ctd_A Zinc finger protein 512 58.9 2.3 7.8E-05 29.7 0.3 10 12-21 35-44 (96)
205 2xeu_A Ring finger protein 4; 58.8 1.8 6.1E-05 27.3 -0.3 50 11-68 3-55 (64)
206 2fiy_A Protein FDHE homolog; F 58.7 2.6 9E-05 36.5 0.7 61 10-70 181-266 (309)
207 2d8v_A Zinc finger FYVE domain 57.9 4.6 0.00016 26.2 1.6 32 8-44 5-37 (67)
208 2dmd_A Zinc finger protein 64, 56.9 3.8 0.00013 27.8 1.2 29 10-38 7-47 (96)
209 1g25_A CDK-activating kinase a 56.9 1.8 6.1E-05 27.7 -0.5 51 12-69 4-55 (65)
210 2kmk_A Zinc finger protein GFI 56.6 3.5 0.00012 27.0 0.9 25 13-37 3-39 (82)
211 3ztg_A E3 ubiquitin-protein li 56.5 4 0.00014 28.0 1.2 51 8-67 10-60 (92)
212 1e4u_A Transcriptional repress 56.4 4 0.00014 27.4 1.2 57 6-70 6-63 (78)
213 3j21_i 50S ribosomal protein L 56.3 3.5 0.00012 28.2 0.9 26 12-39 36-65 (83)
214 3jyw_9 60S ribosomal protein L 56.0 3.9 0.00013 27.1 1.0 25 12-38 27-55 (72)
215 1wd2_A Ariadne-1 protein homol 55.3 7.8 0.00027 24.6 2.4 36 10-45 5-44 (60)
216 1a1h_A QGSR zinc finger peptid 55.1 3.8 0.00013 27.4 0.9 26 12-37 5-44 (90)
217 1llm_C Chimera of ZIF23-GCN4; 54.6 4.2 0.00014 27.2 1.1 26 12-37 4-41 (88)
218 2ckl_B Ubiquitin ligase protei 53.5 2.7 9.2E-05 32.6 -0.1 48 11-68 54-101 (165)
219 3iz5_m 60S ribosomal protein L 53.2 4.6 0.00016 28.1 1.1 26 12-39 37-66 (92)
220 2y43_A E3 ubiquitin-protein li 53.2 2.8 9.4E-05 29.4 -0.1 47 12-69 23-69 (99)
221 2ckl_A Polycomb group ring fin 53.0 3.3 0.00011 29.5 0.3 49 10-69 14-62 (108)
222 2yt9_A Zinc finger-containing 52.9 6.5 0.00022 26.5 1.9 28 10-37 6-45 (95)
223 4ayc_A E3 ubiquitin-protein li 52.6 1.4 5E-05 33.1 -1.7 45 12-68 54-98 (138)
224 1pft_A TFIIB, PFTFIIBN; N-term 52.3 5.3 0.00018 24.2 1.2 8 12-19 6-13 (50)
225 2dmi_A Teashirt homolog 3; zin 51.9 5.2 0.00018 28.3 1.3 13 10-22 18-30 (115)
226 6rxn_A Rubredoxin; electron tr 51.9 5.1 0.00017 24.1 1.0 13 26-38 3-15 (46)
227 1t1h_A Gspef-atpub14, armadill 51.5 3.2 0.00011 27.5 0.0 48 10-68 7-54 (78)
228 2csh_A Zinc finger protein 297 51.3 5.3 0.00018 27.9 1.3 28 10-38 9-48 (110)
229 2ee8_A Protein ODD-skipped-rel 50.7 6.1 0.00021 27.3 1.5 28 10-37 16-55 (106)
230 1f2i_G Fusion of N-terminal 17 50.7 6.3 0.00022 25.1 1.5 28 10-37 18-59 (73)
231 3izc_m 60S ribosomal protein R 49.7 5.7 0.00019 27.7 1.1 26 12-39 37-66 (92)
232 2jmo_A Parkin; IBR, E3 ligase, 49.2 15 0.00053 24.6 3.3 35 10-44 24-67 (80)
233 2k4x_A 30S ribosomal protein S 49.1 7.2 0.00024 24.4 1.4 27 11-37 18-46 (55)
234 1tot_A CREB-binding protein; z 48.8 2.7 9.1E-05 26.0 -0.6 20 12-34 7-26 (52)
235 2kdx_A HYPA, hydrogenase/ureas 48.6 6.1 0.00021 28.9 1.2 12 26-37 72-83 (119)
236 1yk4_A Rubredoxin, RD; electro 48.5 5.8 0.0002 24.5 0.9 14 26-39 1-14 (52)
237 3h0g_L DNA-directed RNA polyme 48.1 8.2 0.00028 24.8 1.6 26 10-35 20-46 (63)
238 1gh9_A 8.3 kDa protein (gene M 47.7 6.5 0.00022 26.0 1.1 23 13-37 6-30 (71)
239 2dlk_A Novel protein; ZF-C2H2 47.1 4.6 0.00016 26.2 0.3 11 12-22 8-20 (79)
240 2kvh_A Zinc finger and BTB dom 46.9 7.3 0.00025 19.0 1.0 12 26-37 2-13 (27)
241 2dlq_A GLI-kruppel family memb 46.6 6.1 0.00021 28.1 0.9 27 11-37 35-76 (124)
242 1ffk_W Ribosomal protein L37AE 46.5 6.1 0.00021 26.3 0.8 29 11-39 27-57 (73)
243 1weo_A Cellulose synthase, cat 46.2 6.2 0.00021 27.2 0.8 57 7-70 12-71 (93)
244 4a17_Y RPL37A, 60S ribosomal p 45.7 5.7 0.00019 28.2 0.6 26 12-39 37-66 (103)
245 2ayj_A 50S ribosomal protein L 45.4 13 0.00044 23.2 2.1 23 10-34 18-40 (56)
246 2eod_A TNF receptor-associated 44.4 5.5 0.00019 25.1 0.3 11 12-22 11-21 (66)
247 2ea5_A Cell growth regulator w 44.1 5.2 0.00018 26.0 0.2 46 9-70 13-59 (68)
248 3hct_A TNF receptor-associated 44.1 5.6 0.00019 28.8 0.4 48 10-68 17-64 (118)
249 2kvf_A Zinc finger and BTB dom 43.3 8.8 0.0003 18.7 1.0 11 27-37 3-13 (28)
250 2vrw_B P95VAV, VAV1, proto-onc 43.2 12 0.00041 33.4 2.6 20 3-22 349-368 (406)
251 3zrh_A Ubiquitin thioesterase 42.8 54 0.0019 29.4 6.5 48 205-252 29-90 (454)
252 1wjp_A Zinc finger protein 295 42.6 6.9 0.00023 27.2 0.7 29 10-38 15-53 (107)
253 4ap4_A E3 ubiquitin ligase RNF 42.4 4.6 0.00016 29.5 -0.3 51 10-68 71-124 (133)
254 2v3b_B Rubredoxin 2, rubredoxi 42.2 8.1 0.00028 24.1 0.9 14 26-39 2-15 (55)
255 2m0d_A Zinc finger and BTB dom 42.1 9.3 0.00032 18.8 1.0 13 26-38 2-14 (30)
256 2kvg_A Zinc finger and BTB dom 41.9 8.8 0.0003 18.8 0.9 11 27-37 3-13 (27)
257 4a0k_B E3 ubiquitin-protein li 41.9 4 0.00014 29.9 -0.7 55 5-67 42-110 (117)
258 4rxn_A Rubredoxin; electron tr 41.4 9.1 0.00031 23.8 1.0 14 26-39 2-15 (54)
259 1jer_A Cucumber stellacyanin; 41.4 9.2 0.00032 28.8 1.2 22 113-134 92-113 (138)
260 1rik_A E6APC1 peptide; E6-bind 41.1 10 0.00034 18.6 1.0 12 27-38 2-13 (29)
261 1x6h_A Transcriptional repress 40.9 8.6 0.0003 25.2 0.9 13 10-22 14-26 (86)
262 2ghf_A ZHX1, zinc fingers and 40.9 7.7 0.00026 27.4 0.7 31 9-39 16-62 (102)
263 2jsp_A Transcriptional regulat 40.6 5.4 0.00019 27.5 -0.1 16 10-25 20-35 (87)
264 1ard_A Yeast transcription fac 40.1 8 0.00027 18.9 0.5 10 28-37 3-12 (29)
265 2lvu_A Zinc finger and BTB dom 46.2 6 0.00021 19.1 0.0 12 27-38 2-13 (26)
266 1e8j_A Rubredoxin; iron-sulfur 39.9 7.1 0.00024 24.1 0.3 13 26-38 2-14 (52)
267 2gmg_A Hypothetical protein PF 39.8 12 0.00042 26.7 1.6 33 11-51 67-100 (105)
268 1z6u_A NP95-like ring finger p 39.8 5.3 0.00018 30.5 -0.4 48 12-70 79-126 (150)
269 2m0f_A Zinc finger and BTB dom 39.7 11 0.00037 18.4 1.0 11 27-37 2-12 (29)
270 2d9k_A FLN29 gene product; zin 39.5 7.9 0.00027 25.4 0.5 32 11-43 17-51 (75)
271 2wbt_A B-129; zinc finger; 2.7 39.4 8.7 0.0003 27.7 0.8 12 26-37 73-84 (129)
272 4b6d_A RAC GTPase-activating p 38.6 12 0.00042 23.8 1.3 31 11-41 19-49 (61)
273 1x4s_A Protein FON, zinc finge 38.3 15 0.00052 23.2 1.7 28 9-39 9-38 (59)
274 1znf_A 31ST zinc finger from X 37.7 9.7 0.00033 18.3 0.6 11 13-23 3-13 (27)
275 2elu_A Zinc finger protein 406 37.0 9.2 0.00031 20.8 0.4 13 25-37 7-19 (37)
276 3knv_A TNF receptor-associated 36.9 7.2 0.00025 29.4 0.0 47 10-67 30-76 (141)
277 2ej4_A Zinc finger protein ZIC 36.9 12 0.00042 25.1 1.2 19 4-22 17-36 (95)
278 1dl6_A Transcription factor II 36.8 19 0.00066 22.5 2.0 9 57-65 30-38 (58)
279 2els_A Zinc finger protein 406 36.7 12 0.00042 19.6 1.0 14 25-38 7-20 (36)
280 2lk0_A RNA-binding protein 5; 36.6 11 0.00039 20.5 0.8 20 14-35 8-27 (32)
281 4hc9_A Trans-acting T-cell-spe 36.4 12 0.00041 27.2 1.1 37 36-73 60-96 (115)
282 2m0e_A Zinc finger and BTB dom 35.9 11 0.00039 18.2 0.7 10 28-37 3-12 (29)
283 4ic3_A E3 ubiquitin-protein li 34.9 3.9 0.00013 27.0 -1.7 43 11-69 24-67 (74)
284 3a43_A HYPD, hydrogenase nicke 34.8 12 0.0004 28.2 0.9 12 26-37 69-80 (139)
285 1wim_A KIAA0161 protein; ring 34.2 8.9 0.00031 26.4 0.1 55 10-66 4-61 (94)
286 3bbo_Y Ribosomal protein L28; 34.0 62 0.0021 24.6 4.7 60 11-70 75-135 (151)
287 1klr_A Zinc finger Y-chromosom 33.0 11 0.00039 18.4 0.4 10 28-37 3-12 (30)
288 2ely_A Zinc finger protein 224 32.9 22 0.00074 20.0 1.8 13 11-23 12-24 (46)
289 1dx8_A Rubredoxin; electron tr 32.9 15 0.0005 24.2 1.0 15 25-39 5-19 (70)
290 2elx_A Zinc finger protein 406 32.8 16 0.00054 18.9 1.0 13 26-38 6-18 (35)
291 3t6p_A Baculoviral IAP repeat- 32.5 14 0.00049 32.4 1.2 43 11-69 295-338 (345)
292 2lvt_A Zinc finger and BTB dom 38.3 9.6 0.00033 18.8 0.0 12 27-38 2-13 (29)
293 1rmd_A RAG1; V(D)J recombinati 32.0 8.4 0.00029 27.7 -0.3 48 11-69 23-70 (116)
294 4a18_A RPL37, ribosomal protei 31.9 19 0.00066 24.9 1.5 7 30-36 19-25 (94)
295 2epw_A Zinc finger protein 268 31.9 14 0.00048 20.8 0.7 12 11-22 12-23 (46)
296 2kwq_A Protein MCM10 homolog; 31.8 15 0.0005 25.6 0.9 9 11-19 15-23 (92)
297 1paa_A Yeast transcription fac 31.6 13 0.00045 18.3 0.5 10 28-37 3-12 (30)
298 3c5k_A HD6, histone deacetylas 31.4 29 0.00098 24.9 2.5 26 11-40 24-49 (109)
299 2elt_A Zinc finger protein 406 30.6 18 0.00062 18.8 1.0 12 26-37 8-19 (36)
300 2k1p_A Zinc finger RAN-binding 30.6 24 0.00081 19.3 1.5 20 14-35 9-28 (33)
301 2ytt_A Zinc finger protein 473 30.5 17 0.00059 20.4 1.0 13 11-23 12-24 (46)
302 2ytm_A Zinc finger protein 28 30.5 15 0.0005 20.8 0.7 13 11-23 12-24 (46)
303 2i13_A AART; DNA binding, zinc 30.4 16 0.00055 28.3 1.1 28 10-37 20-59 (190)
304 2yu8_A Zinc finger protein 347 30.4 15 0.00053 20.6 0.7 12 11-22 12-23 (46)
305 2elr_A Zinc finger protein 406 30.4 14 0.00048 19.3 0.5 13 25-37 7-19 (36)
306 2elv_A Zinc finger protein 406 30.4 18 0.00063 18.9 1.0 14 25-38 7-20 (36)
307 1qxf_A GR2, 30S ribosomal prot 30.2 24 0.00082 22.8 1.6 26 13-38 9-37 (66)
308 2fc7_A ZZZ3 protein; structure 30.0 17 0.00058 24.7 1.0 31 12-43 22-56 (82)
309 1srk_A Zinc finger protein ZFP 29.9 19 0.00065 18.6 1.0 13 26-38 6-18 (35)
310 2eq4_A Zinc finger protein 224 29.8 16 0.00053 20.6 0.7 13 11-23 12-24 (46)
311 2d8s_A Cellular modulator of i 29.8 15 0.00053 24.6 0.7 57 8-70 12-71 (80)
312 1s24_A Rubredoxin 2; electron 29.7 16 0.00054 25.2 0.8 15 25-39 33-47 (87)
313 2elo_A Zinc finger protein 406 29.6 15 0.0005 19.4 0.5 12 26-37 8-19 (37)
314 2hf1_A Tetraacyldisaccharide-1 29.5 20 0.00067 23.4 1.2 14 11-24 8-21 (68)
315 2ytg_A ZFP-95, zinc finger pro 29.3 16 0.00056 20.5 0.7 12 11-22 12-23 (46)
316 2ytq_A Zinc finger protein 268 29.3 20 0.00069 20.1 1.1 12 11-22 12-23 (46)
317 1wil_A KIAA1045 protein; ring 29.2 20 0.00067 24.5 1.1 32 11-44 15-46 (89)
318 2jr6_A UPF0434 protein NMA0874 29.2 20 0.00069 23.4 1.2 27 10-42 7-33 (68)
319 1d4u_A Nucleotide excision rep 29.2 31 0.001 24.9 2.3 12 55-66 24-35 (111)
320 2epz_A Zinc finger protein 28 29.0 20 0.00067 20.1 1.0 13 11-23 12-24 (46)
321 2elq_A Zinc finger protein 406 28.9 20 0.00069 18.7 1.0 12 26-37 8-19 (36)
322 2ct0_A Non-SMC element 1 homol 28.9 12 0.00042 24.8 0.1 51 9-68 13-63 (74)
323 2lvr_A Zinc finger and BTB dom 34.9 12 0.0004 18.4 0.0 12 12-23 4-15 (30)
324 3iz5_l 60S ribosomal protein L 28.5 18 0.00063 25.0 0.9 13 30-42 19-38 (94)
325 1rim_A E6APC2 peptide; E6-bind 28.5 16 0.00054 19.0 0.5 12 12-23 3-14 (33)
326 2elz_A Zinc finger protein 224 28.3 21 0.00073 20.0 1.1 13 10-22 11-23 (46)
327 2elp_A Zinc finger protein 406 28.1 21 0.00072 18.7 1.0 13 26-38 8-20 (37)
328 2ytr_A Zinc finger protein 347 28.0 20 0.0007 20.0 1.0 14 10-23 11-24 (46)
329 3j20_W 30S ribosomal protein S 28.0 28 0.00095 22.3 1.6 28 12-39 16-46 (63)
330 2eop_A Zinc finger protein 268 27.8 18 0.00061 20.3 0.7 12 11-22 12-23 (46)
331 1p7a_A BF3, BKLF, kruppel-like 27.6 17 0.00057 19.2 0.5 14 10-23 10-23 (37)
332 1v6g_A Actin binding LIM prote 27.6 26 0.00089 23.1 1.6 13 58-70 64-76 (81)
333 2eov_A Zinc finger protein 484 27.5 23 0.00078 19.8 1.2 13 11-23 12-24 (46)
334 2kn9_A Rubredoxin; metalloprot 27.4 19 0.00066 24.4 0.9 15 25-39 25-39 (81)
335 2kpi_A Uncharacterized protein 27.2 22 0.00076 22.1 1.1 25 10-42 9-35 (56)
336 2jny_A Uncharacterized BCR; st 27.1 23 0.00079 23.0 1.2 15 10-24 9-23 (67)
337 1gp8_A Protein (scaffolding pr 27.1 41 0.0014 19.2 2.0 18 268-285 17-34 (40)
338 2y1n_A E3 ubiquitin-protein li 26.9 16 0.00053 32.7 0.4 48 12-70 333-380 (389)
339 2ecg_A Baculoviral IAP repeat- 26.8 6.6 0.00023 25.8 -1.6 43 11-69 25-68 (75)
340 3iuf_A Zinc finger protein UBI 26.6 22 0.00077 20.4 1.0 14 25-38 5-18 (48)
341 3k7a_M Transcription initiatio 26.6 24 0.00082 30.8 1.6 15 5-19 14-29 (345)
342 2em0_A Zinc finger protein 224 26.6 22 0.00077 19.9 1.0 12 11-22 12-23 (46)
343 1fv5_A First zinc finger of U- 26.6 19 0.00066 19.9 0.6 14 10-23 7-20 (36)
344 2pk7_A Uncharacterized protein 26.5 25 0.00084 23.0 1.2 15 10-24 7-21 (69)
345 2yqq_A Zinc finger HIT domain- 26.4 35 0.0012 21.3 1.9 23 12-39 13-35 (56)
346 2eoq_A Zinc finger protein 224 26.4 18 0.00062 20.3 0.5 12 11-22 12-23 (46)
347 2wbs_A Krueppel-like factor 4; 26.4 21 0.00072 23.4 1.0 12 11-22 5-18 (89)
348 2yrk_A Zinc finger homeobox pr 26.3 18 0.00061 22.4 0.5 15 8-22 10-24 (55)
349 2eoe_A Zinc finger protein 347 26.0 17 0.00059 20.4 0.4 14 10-23 11-24 (46)
350 2kfq_A FP1; protein, de novo p 25.6 14 0.00049 18.9 -0.1 11 12-22 3-13 (32)
351 2emk_A Zinc finger protein 28 25.3 27 0.00091 19.6 1.2 13 11-23 12-24 (46)
352 2epa_A Krueppel-like factor 10 25.3 30 0.001 21.6 1.6 13 10-22 16-30 (72)
353 2j7j_A Transcription factor II 24.7 24 0.00081 22.7 1.0 10 13-22 3-14 (85)
354 3vk6_A E3 ubiquitin-protein li 24.7 4.1 0.00014 28.9 -3.0 49 12-70 2-50 (101)
355 2elm_A Zinc finger protein 406 24.6 25 0.00086 18.6 0.9 13 26-38 8-20 (37)
356 3dpl_R Ring-box protein 1; ubi 24.3 13 0.00045 26.5 -0.5 54 5-66 31-98 (106)
357 2jp9_A Wilms tumor 1; DNA bind 24.1 24 0.00082 24.6 0.9 28 11-38 36-77 (119)
358 3zrh_A Ubiquitin thioesterase 24.1 1.5E+02 0.0052 26.5 6.1 48 238-285 29-90 (454)
359 1lko_A Rubrerythrin all-iron(I 23.8 23 0.00078 28.1 0.8 13 26-38 154-166 (191)
360 2d8q_A BLU protein, zinc finge 23.4 33 0.0011 22.3 1.5 21 11-36 15-35 (70)
361 1njq_A Superman protein; zinc- 23.3 29 0.00099 18.5 1.0 13 26-38 5-17 (39)
362 2ytn_A Zinc finger protein 347 23.3 30 0.001 19.3 1.1 14 10-23 11-24 (46)
363 2dj8_A Protein CBFA2T1; zinc f 23.2 65 0.0022 20.0 2.8 26 9-39 13-39 (60)
364 2epv_A Zinc finger protein 268 23.0 29 0.001 19.2 1.0 14 25-38 10-23 (44)
365 2jl6_1 50S ribosomal protein L 22.8 29 0.001 23.9 1.1 21 52-72 55-75 (89)
366 2js4_A UPF0434 protein BB2007; 22.7 30 0.001 22.7 1.1 27 10-42 7-33 (70)
367 2od1_A Protein CBFA2T1; zinc f 22.5 40 0.0014 21.0 1.7 26 9-39 11-37 (60)
368 1gnf_A Transcription factor GA 22.2 73 0.0025 18.9 2.6 13 58-70 26-38 (46)
369 3k1f_M Transcription initiatio 22.1 36 0.0012 26.7 1.6 12 56-67 41-52 (197)
370 2puy_A PHD finger protein 21A; 22.1 85 0.0029 19.4 3.2 55 9-71 3-57 (60)
371 2ab3_A ZNF29; zinc finger prot 22.1 31 0.0011 16.5 0.9 11 27-37 2-14 (29)
372 1ubd_C Protein (YY1 zinc finge 22.0 28 0.00095 24.5 0.9 11 12-22 6-18 (124)
373 3na7_A HP0958; flagellar bioge 21.8 29 0.001 28.8 1.2 26 12-37 199-232 (256)
374 2emi_A Zinc finger protein 484 21.6 34 0.0012 19.0 1.1 14 25-38 10-23 (46)
375 2k2d_A Ring finger and CHY zin 21.6 27 0.00091 23.5 0.7 12 12-23 38-49 (79)
376 2xzm_6 RPS27E; ribosome, trans 21.5 42 0.0014 22.6 1.6 27 13-39 34-63 (81)
377 2ept_A Zinc finger protein 32; 21.4 34 0.0011 18.4 1.0 14 25-38 8-21 (41)
378 2yte_A Zinc finger protein 473 21.1 28 0.00094 18.9 0.6 14 10-23 9-22 (42)
379 2ytp_A Zinc finger protein 484 20.9 36 0.0012 18.9 1.1 14 25-38 10-23 (46)
380 2epc_A Zinc finger protein 32; 20.7 37 0.0013 18.3 1.1 14 25-38 9-22 (42)
381 2eow_A Zinc finger protein 347 20.5 35 0.0012 18.9 1.0 14 25-38 10-23 (46)
382 2ebt_A Krueppel-like factor 5; 20.5 26 0.00089 23.5 0.5 29 10-38 14-58 (100)
383 2vut_I AREA, nitrogen regulato 20.3 46 0.0016 19.4 1.5 32 38-70 4-35 (43)
384 3h0g_I DNA-directed RNA polyme 20.1 61 0.0021 23.2 2.4 30 36-65 5-34 (113)
385 2yrj_A Zinc finger protein 473 20.0 39 0.0013 18.7 1.1 14 25-38 10-23 (46)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.94 E-value=1.5e-26 Score=188.41 Aligned_cols=95 Identities=27% Similarity=0.391 Sum_probs=69.1
Q ss_pred ChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcH
Q 022481 198 NGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQY 277 (296)
Q Consensus 198 ~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~ 277 (296)
|.||||+|+..|+.++|++||++|+++|.+|..|+||||+|+..|+.+++++||++|++++.+|.+|+||||+|+..|+.
T Consensus 70 g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~ 149 (169)
T 4gpm_A 70 GRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNE 149 (169)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCH
Confidence 34477777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHcCCCCCC
Q 022481 278 KMRQKMEEDKNNVGS 292 (296)
Q Consensus 278 ~iv~~Ll~~gadi~~ 292 (296)
+++++|+++||+++.
T Consensus 150 ~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 150 EVVKLLEKQGGWLEH 164 (169)
T ss_dssp HHHHHHHTC------
T ss_pred HHHHHHHHCCCCcCC
Confidence 777777777777764
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.94 E-value=1e-26 Score=189.35 Aligned_cols=125 Identities=24% Similarity=0.374 Sum_probs=118.6
Q ss_pred CCCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC
Q 022481 164 RSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNR 243 (296)
Q Consensus 164 ~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~ 243 (296)
.++..+..++++.|++.|+++|..+..+.+ |||+|+..++.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 10 ~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t-------~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~ 82 (169)
T 4gpm_A 10 EAAENGNKDRVKDLIENGADVNASDSDGRT-------PLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGH 82 (169)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCcCCCCCC-------HHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCC
Confidence 345567788899999999999999888777 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 244 TDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 244 ~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
.+++++||++|+++|.+|.+|+||||+|+..|+.++|++|+++|++++.+|+
T Consensus 83 ~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~ 134 (169)
T 4gpm_A 83 KEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDS 134 (169)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC
Confidence 9999999999999999999999999999999999999999999999998875
No 3
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.92 E-value=7.8e-25 Score=159.92 Aligned_cols=92 Identities=32% Similarity=0.425 Sum_probs=89.3
Q ss_pred ChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcH
Q 022481 198 NGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQY 277 (296)
Q Consensus 198 ~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~ 277 (296)
|.||||+|+..|+.+++++|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~ 81 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 56799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCC
Q 022481 278 KMRQKMEEDKNN 289 (296)
Q Consensus 278 ~iv~~Ll~~gad 289 (296)
+++++|+++||+
T Consensus 82 ~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 82 EVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHcCCC
Confidence 999999999986
No 4
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.91 E-value=5.1e-25 Score=178.50 Aligned_cols=130 Identities=23% Similarity=0.361 Sum_probs=120.6
Q ss_pred CccccCCCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHH
Q 022481 159 TENTARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLA 238 (296)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A 238 (296)
......++..+...++++|++.|.+++..+..+.+ +||+|+..|+.+++++|+++|++++..|..|+||||+|
T Consensus 15 ~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 87 (169)
T 2y1l_E 15 GKKLLEAARAGRDDEVRILMANGADVNAEDASGWT-------PLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLA 87 (169)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred cchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC-------HHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHH
Confidence 34455666678888999999999999988877766 99999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 239 ALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 239 ~~~g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 88 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 144 (169)
T 2y1l_E 88 ALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDK 144 (169)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 999999999999999999999999999999999999999999999999999998864
No 5
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.90 E-value=2.5e-23 Score=159.66 Aligned_cols=99 Identities=22% Similarity=0.228 Sum_probs=95.0
Q ss_pred cChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCc
Q 022481 197 VNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQ 276 (296)
Q Consensus 197 ~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~ 276 (296)
.+.|+||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~ 85 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGH 85 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCC
Confidence 45679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCC
Q 022481 277 YKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 277 ~~iv~~Ll~~gadi~~~n~ 295 (296)
.+++++|+++|++++.+|.
T Consensus 86 ~~~v~~Ll~~ga~~~~~~~ 104 (123)
T 3aaa_C 86 VSCVKLLLSKGADKTVKGP 104 (123)
T ss_dssp HHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHHHcCCCCCCcCC
Confidence 9999999999999998874
No 6
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.90 E-value=1.6e-24 Score=173.38 Aligned_cols=126 Identities=19% Similarity=0.251 Sum_probs=109.2
Q ss_pred ccCCCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCc-HHHHHHH
Q 022481 162 TARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMS-LLHLAAL 240 (296)
Q Consensus 162 ~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~T-pLh~A~~ 240 (296)
...+...+...++++|++.|.+++..+..+.+ |||+|+ .|+.+++++|+++|++++.+|..|+| |||+|+.
T Consensus 16 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~ 87 (156)
T 1bi7_B 16 LATAAARGRVEEVRALLEAGANPNAPNSYGRR-------PIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAR 87 (156)
T ss_dssp HHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCC-------TTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC-------HHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHH
Confidence 33444556778899999999999998877776 999985 99999999999999999999999999 9999999
Q ss_pred cCCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 241 FNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 241 ~g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 88 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 142 (156)
T 1bi7_B 88 EGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNH 142 (156)
T ss_dssp HTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC--------
T ss_pred CCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCc
Confidence 9999999999999999999999999999999999999999999999999998764
No 7
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.90 E-value=1.5e-23 Score=163.82 Aligned_cols=120 Identities=21% Similarity=0.304 Sum_probs=104.7
Q ss_pred cccCCCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHH
Q 022481 161 NTARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAAL 240 (296)
Q Consensus 161 ~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~ 240 (296)
....++..+...+++.|++.|.+++..+..+.+ +||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 17 ~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~ 89 (136)
T 2jab_A 17 KLLEAARAGQDDEVRILMANGADVNAKDEYGLT-------PLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCC-------HHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 344455567778888999999988888776666 9999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcC
Q 022481 241 FNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDK 287 (296)
Q Consensus 241 ~g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g 287 (296)
.|+.+++++|+++|++++.+|.+|+||||+|+..|+.+++++|+++|
T Consensus 90 ~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred cCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999876
No 8
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.90 E-value=1.5e-23 Score=182.99 Aligned_cols=127 Identities=17% Similarity=0.164 Sum_probs=117.2
Q ss_pred ccCCCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHc
Q 022481 162 TARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALF 241 (296)
Q Consensus 162 ~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~ 241 (296)
+.-++..+...++++|+..|++++..+..+.+ |||+|+..++.+++++|++.|+++|.+|..|+||||+|+..
T Consensus 90 Lh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t-------~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~ 162 (269)
T 4b93_B 90 LHVAALHGRADLIPLLLKHGANAGARNADQAV-------PLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSG 162 (269)
T ss_dssp HHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCC-------HHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHT
T ss_pred HHHHHHcCcHHHHHHHHhcCCCcCccCCCCCC-------ccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
Confidence 34445567788899999999999888877766 99999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 242 NRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 242 g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
|+.+++++||++|+++|.+|..|+||||+|+..|+.++|++||++|||++++|+
T Consensus 163 g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~ 216 (269)
T 4b93_B 163 GHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNK 216 (269)
T ss_dssp TCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCT
T ss_pred CCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCC
Confidence 999999999999999999999999999999999999999999999999999875
No 9
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.90 E-value=2.2e-24 Score=168.61 Aligned_cols=120 Identities=20% Similarity=0.223 Sum_probs=105.1
Q ss_pred ccCCCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCC-CCcHHHHHHH
Q 022481 162 TARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQ-GMSLLHLAAL 240 (296)
Q Consensus 162 ~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~-g~TpLh~A~~ 240 (296)
...+...+...++++|++.|++++..+..+.+ |||+|+. |+.+++++|+++|++++.+|.. |+||||+|+.
T Consensus 16 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~ 87 (136)
T 1d9s_A 16 LATAAARGQVETVRQLLEAGADPNALNRFGRR-------PIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAR 87 (136)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCT-------TTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCC-------HHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHH
Confidence 33444556777888899999888888776665 9999999 9999999999999999999998 8999999999
Q ss_pred cCCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCC
Q 022481 241 FNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNN 289 (296)
Q Consensus 241 ~g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad 289 (296)
.|+.+++++|+++|++++.+|..|+||||+|+..++.+++++|+++|||
T Consensus 88 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 88 EGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999999886
No 10
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.90 E-value=4.4e-23 Score=161.15 Aligned_cols=98 Identities=22% Similarity=0.231 Sum_probs=93.3
Q ss_pred ChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcH
Q 022481 198 NGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQY 277 (296)
Q Consensus 198 ~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~ 277 (296)
|.|+||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.
T Consensus 10 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 89 (137)
T 3c5r_A 10 GETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHV 89 (137)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCCH
Confidence 44599999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCC
Q 022481 278 KMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 278 ~iv~~Ll~~gadi~~~n~ 295 (296)
+++++|+++|++++.+|.
T Consensus 90 ~~v~~Ll~~ga~~~~~~~ 107 (137)
T 3c5r_A 90 DIVKLLLSYGASRNAVNI 107 (137)
T ss_dssp HHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHHcCCCCCCCCC
Confidence 999999999999998874
No 11
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.90 E-value=1.3e-23 Score=179.91 Aligned_cols=126 Identities=20% Similarity=0.231 Sum_probs=90.7
Q ss_pred ccCCCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHc
Q 022481 162 TARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALF 241 (296)
Q Consensus 162 ~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~ 241 (296)
...+...+....++.|++.|++++.. . .+.|+||+|+..|+.++|++||+.|+++|.+|..|+||||+|+..
T Consensus 9 L~~a~~~~~~~~~~~ll~~g~~~~~~-~-------~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 80 (239)
T 1ycs_B 9 LPPGKRTNLRKTGSERIAHGMRVKFN-P-------LPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCA 80 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHH
T ss_pred CchhhhhhhHHHHHHHhccCCCcccC-c-------hhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 34445556677888999999888743 2 345699999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 242 NRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 242 g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
|+.+++++||++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 81 g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 134 (239)
T 1ycs_B 81 GHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTY 134 (239)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCS
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecC
Confidence 999999999999999999999999999999999999999999999999988763
No 12
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.90 E-value=1.6e-23 Score=166.75 Aligned_cols=120 Identities=18% Similarity=0.199 Sum_probs=108.3
Q ss_pred CCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHH
Q 022481 168 STSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIA 247 (296)
Q Consensus 168 ~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~iv 247 (296)
.+....++.|++.|.+.+ .+.. |.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++
T Consensus 12 ~g~~~~v~~Ll~~g~~~~-~~~~-------g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 83 (153)
T 1awc_B 12 AGQDDEVRILMANGAPFT-TDWL-------GTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIV 83 (153)
T ss_dssp HTCHHHHHHHHHHTCCCC-CCTT-------CCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHH
T ss_pred cCCHHHHHHHHHcCCCCC-cCCC-------CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHH
Confidence 345667788888887665 2333 44599999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 248 FILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 248 ~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 84 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 131 (153)
T 1awc_B 84 EVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSK 131 (153)
T ss_dssp HHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC
Confidence 999999999999999999999999999999999999999999998874
No 13
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.89 E-value=1.4e-23 Score=170.18 Aligned_cols=122 Identities=20% Similarity=0.195 Sum_probs=94.4
Q ss_pred CCCCCcCcccccCCCCC-CCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHH
Q 022481 167 GSTSNSNFSSIFNPGQV-TNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTD 245 (296)
Q Consensus 167 ~~~~~~~~~~ll~~g~~-~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~ 245 (296)
..+....++.|+..+.. .+..+..+.+ |||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+
T Consensus 11 ~~g~~~~v~~ll~~~~~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 83 (172)
T 3v30_A 11 AQGELDQLKEHLRKGDNLVNKPDERGFT-------PLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTD 83 (172)
T ss_dssp HTTCHHHHHHHHTTCSGGGGCCCTTSCC-------HHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred HcCCHHHHHHHHHcCcccccCCCCCCCC-------HHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHH
Confidence 34555667777777665 5666655555 888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 246 IAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 246 iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 84 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 133 (172)
T 3v30_A 84 IVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEAD 133 (172)
T ss_dssp HHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC
Confidence 88888888888888888888888888888888888888888888877653
No 14
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.89 E-value=5.1e-23 Score=165.65 Aligned_cols=121 Identities=17% Similarity=0.216 Sum_probs=103.9
Q ss_pred CCCCcCcccccCC-CCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHH
Q 022481 168 STSNSNFSSIFNP-GQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDI 246 (296)
Q Consensus 168 ~~~~~~~~~ll~~-g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~i 246 (296)
.+....++.|+.. +...+..+..+. ||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++
T Consensus 18 ~g~~~~v~~ll~~~~~~~~~~~~~g~-------t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 90 (165)
T 3twr_A 18 AGDVETVKKLCTVQSVNCRDIEGRQS-------TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEV 90 (165)
T ss_dssp HTCHHHHHHHCCTTTTTCCCTTTTCC-------CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred hCCHHHHHHHHHcCCCCccccccCCC-------CHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHH
Confidence 3455667777764 344444444444 49999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 247 AFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 247 v~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
+++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 91 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 139 (165)
T 3twr_A 91 AELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNR 139 (165)
T ss_dssp HHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCC
Confidence 9999999999999999999999999999999999999999999988774
No 15
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.89 E-value=3.3e-23 Score=169.27 Aligned_cols=119 Identities=22% Similarity=0.228 Sum_probs=70.6
Q ss_pred CCCcCcccccCC-CCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHH
Q 022481 169 TSNSNFSSIFNP-GQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIA 247 (296)
Q Consensus 169 ~~~~~~~~ll~~-g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~iv 247 (296)
+....++.|+.. +.+++..+..+.+ |||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++
T Consensus 16 g~~~~v~~ll~~~~~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 88 (179)
T 3f6q_A 16 GNAVAVRLWLDNTENDLNQGDDHGFS-------PLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIV 88 (179)
T ss_dssp TCHHHHHHHHHCTTSCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred CCHHHHHHHHhcCcccccccCCCCCC-------HHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHH
Confidence 334445555544 3344444444443 66666666666666666666666666666666666666666666666
Q ss_pred HHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCC
Q 022481 248 FILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTT 294 (296)
Q Consensus 248 ~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n 294 (296)
++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|
T Consensus 89 ~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 135 (179)
T 3f6q_A 89 QKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICN 135 (179)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCC
T ss_pred HHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhc
Confidence 66666666666666666666666666666666666666666665554
No 16
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.89 E-value=2.6e-23 Score=167.68 Aligned_cols=124 Identities=23% Similarity=0.200 Sum_probs=112.9
Q ss_pred CCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCH
Q 022481 165 SRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRT 244 (296)
Q Consensus 165 ~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~ 244 (296)
++..+....++.|++.|.+++..+..+.+ |||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.
T Consensus 10 A~~~g~~~~v~~ll~~~~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 82 (167)
T 3v31_A 10 LAAQGEMLYLATRIEQENVINHTDEEGFT-------PLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYT 82 (167)
T ss_dssp HHHTTCHHHHHHHHHHSSCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred HHHCCCHHHHHHHHHcCCCcCCCCCCCCC-------HHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCH
Confidence 34456677788899999888888877766 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 245 DIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 245 ~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 83 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 133 (167)
T 3v31_A 83 DIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETD 133 (167)
T ss_dssp HHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 999999999999999999999999999999999999999999999988764
No 17
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.89 E-value=4e-24 Score=152.75 Aligned_cols=70 Identities=26% Similarity=0.585 Sum_probs=64.4
Q ss_pred CCCCCCCccccccccccccccccccccccccccceEcCCCCCCceecCCCCCC------CceeccccchhhhcccC
Q 022481 2 SIEPPAFQEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIH------TNVRVCADCFNSSSRTG 71 (296)
Q Consensus 2 ~~~w~~~~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~------~~~rvC~~C~~~~~~~~ 71 (296)
...|+||.++..|+.|+++|++|+||||||.||+|||..|+.+++++|.++.. +++|||+.||..|+...
T Consensus 5 ~~~W~pd~~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~~~~l~~~g~~~p~~~~~~~RVC~~C~~~l~~~~ 80 (84)
T 1x4u_A 5 SSGRYPTNNFGNCTGCSATFSVLKKRRSCSNCGNSFCSRCCSFKVPKSSMGATAPEAQRETVFVCASCNQTLSKSG 80 (84)
T ss_dssp CCCSCSCCCCSSCSSSCCCCCSSSCCEECSSSCCEECTTTSCEEECSTTTSCCCSSCSSCCEEECHHHHHHHHSCC
T ss_pred CCccccCCCCCcCcCcCCccccchhhhhhcCCCcEEChhhcCCceecccccccCccccCCccEECHHHHHHHhccC
Confidence 46899999999999999999999999999999999999999999999988753 67999999999997653
No 18
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.89 E-value=6.4e-23 Score=174.84 Aligned_cols=123 Identities=17% Similarity=0.181 Sum_probs=87.6
Q ss_pred CCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCH
Q 022481 165 SRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRT 244 (296)
Q Consensus 165 ~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~ 244 (296)
++..+...+++.|++.|++++..+..+.+ |||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.
T Consensus 28 A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t-------pLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~ 100 (229)
T 2vge_A 28 AALTGELEVVQQAVKEMNDPSQPNEEGIT-------ALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDT 100 (229)
T ss_dssp HHHHTCHHHHHHHHHHSSCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred HHHcCCHHHHHHHHhcCCCCCCCCCCCCC-------HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 33445666677777777777766655555 77777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHCCCCCCccC-CCCCCHhhHh--hhcCcHHHHHHHHHcCCCCCCCC
Q 022481 245 DIAFILMESGANMDCKN-AQGESPLDCA--PVTLQYKMRQKMEEDKNNVGSTT 294 (296)
Q Consensus 245 ~iv~~LL~~ga~~~~~d-~~g~TpL~~A--~~~g~~~iv~~Ll~~gadi~~~n 294 (296)
+++++||++|++++..+ ..|+||||+| +..|+.+++++|+++|++++.+|
T Consensus 101 ~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~ 153 (229)
T 2vge_A 101 VICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMN 153 (229)
T ss_dssp HHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSG
T ss_pred HHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCccccc
Confidence 77777777777777765 4777777777 67777777777777777776654
No 19
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.89 E-value=3.4e-23 Score=170.95 Aligned_cols=124 Identities=22% Similarity=0.270 Sum_probs=115.1
Q ss_pred CCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCH
Q 022481 165 SRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRT 244 (296)
Q Consensus 165 ~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~ 244 (296)
+...+....++.|++.|.+++..+..+.+ |||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.
T Consensus 42 A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 114 (192)
T 2rfm_A 42 ACMLGMENAIDKLVENFDKLEDKDIEGST-------ALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYS 114 (192)
T ss_dssp HHHHTCGGGHHHHHHHHCCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred HHHcCCHHHHHHHHHhccccccccccCcc-------HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCH
Confidence 33446778899999999998888777666 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 245 DIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 245 ~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|.
T Consensus 115 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 165 (192)
T 2rfm_A 115 EMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDL 165 (192)
T ss_dssp HHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCT
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC
Confidence 999999999999999999999999999999999999999999999998764
No 20
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.89 E-value=8.5e-23 Score=159.50 Aligned_cols=99 Identities=24% Similarity=0.388 Sum_probs=95.7
Q ss_pred cChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCc
Q 022481 197 VNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQ 276 (296)
Q Consensus 197 ~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~ 276 (296)
.+.|+||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+
T Consensus 13 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~ 92 (136)
T 2jab_A 13 DLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGH 92 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred cccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCC
Confidence 46779999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCC
Q 022481 277 YKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 277 ~~iv~~Ll~~gadi~~~n~ 295 (296)
.+++++|+++|++++.+|.
T Consensus 93 ~~~v~~Ll~~g~~~~~~~~ 111 (136)
T 2jab_A 93 LEIAEVLLKHGADVNAQDK 111 (136)
T ss_dssp HHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHHHcCCCCcCcCC
Confidence 9999999999999998864
No 21
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.89 E-value=4.3e-23 Score=161.20 Aligned_cols=106 Identities=17% Similarity=0.243 Sum_probs=99.1
Q ss_pred CCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccC
Q 022481 182 QVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKN 261 (296)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~iv~~LL~~ga~~~~~d 261 (296)
.+++..+..+.+ |||+|+..|+.+++++|+++|++++.+|..|+||||+|+. ++.+++++|+++|++++.+|
T Consensus 3 ~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~ 74 (136)
T 1d9s_A 3 PGIHMLGGSSDA-------GLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCAD 74 (136)
T ss_dssp CCCSCCCCCCSC-------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCB
T ss_pred CCccCCCCCCcc-------HHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcC
Confidence 455666665555 9999999999999999999999999999999999999999 99999999999999999999
Q ss_pred CC-CCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 262 AQ-GESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 262 ~~-g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
.. |+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 75 ~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~ 109 (136)
T 1d9s_A 75 PATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDA 109 (136)
T ss_dssp TTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSS
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC
Confidence 99 99999999999999999999999999998874
No 22
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.89 E-value=5.5e-23 Score=164.72 Aligned_cols=114 Identities=19% Similarity=0.195 Sum_probs=101.6
Q ss_pred CCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHH
Q 022481 169 TSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAF 248 (296)
Q Consensus 169 ~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~iv~ 248 (296)
+...++++|++.|.+++..+..+.+ |||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++
T Consensus 48 ~~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 120 (162)
T 1ihb_A 48 GNPEIARRLLLRGANPDLKDRTGFA-------VIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVE 120 (162)
T ss_dssp SCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred CcHHHHHHHHHcCCCCCCCCCCCCC-------HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHH
Confidence 7778888999999988888776666 999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCC-CCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCC
Q 022481 249 ILMESGAN-MDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNN 289 (296)
Q Consensus 249 ~LL~~ga~-~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad 289 (296)
+|+++|++ ++..|..|+||||+|+..|+.+++++|+++|||
T Consensus 121 ~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 121 FLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred HHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 99999988 589999999999999999999999999999986
No 23
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.89 E-value=5.3e-23 Score=157.31 Aligned_cols=114 Identities=28% Similarity=0.371 Sum_probs=106.5
Q ss_pred CCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHH
Q 022481 169 TSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAF 248 (296)
Q Consensus 169 ~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~iv~ 248 (296)
+...+++.|++.|.+++..+..+.+ +||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.++++
T Consensus 13 ~~~~~v~~Ll~~~~~~~~~~~~g~t-------~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~ 85 (126)
T 1n0r_A 13 GHLEVVKLLLEAGADVNAKDKNGRT-------PLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVK 85 (126)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTSCC-------HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred CcHHHHHHHHHcCCCCCCcCCCCCc-------HHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHHH
Confidence 4556788899999988888776666 999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCC
Q 022481 249 ILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNN 289 (296)
Q Consensus 249 ~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad 289 (296)
+|+++|++++.+|..|.||||+|+..|+.+++++|+++|||
T Consensus 86 ~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 86 LLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999986
No 24
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.89 E-value=1.3e-23 Score=159.28 Aligned_cols=99 Identities=30% Similarity=0.432 Sum_probs=94.4
Q ss_pred cChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCc
Q 022481 197 VNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQ 276 (296)
Q Consensus 197 ~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~ 276 (296)
.|.|+||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 8 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~~ 87 (115)
T 2l6b_A 8 DGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGH 87 (115)
T ss_dssp SSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCC
Confidence 44569999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCC
Q 022481 277 YKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 277 ~~iv~~Ll~~gadi~~~n~ 295 (296)
.+++++|+++|+++|.++.
T Consensus 88 ~~~~~~Ll~~ga~~n~~~~ 106 (115)
T 2l6b_A 88 HEIVKLLDAKGADVNARSW 106 (115)
T ss_dssp HHHHHHHHTTSSSHHHHSC
T ss_pred HHHHHHHHHcCCCCCcCCc
Confidence 9999999999999987653
No 25
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=99.89 E-value=4.6e-24 Score=152.31 Aligned_cols=69 Identities=35% Similarity=0.697 Sum_probs=65.3
Q ss_pred CCCCCCCccccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhccc
Q 022481 2 SIEPPAFQEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRT 70 (296)
Q Consensus 2 ~~~w~~~~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~ 70 (296)
...|+||.++..|+.|+++|++|+||||||.||+|||+.|+.+++++|..+..+++|||+.||..++..
T Consensus 12 ~~~W~pd~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~~ 80 (84)
T 1z2q_A 12 KGYWQEDEDAPACNGCGCVFTTTVRRHHCRNCGYVLCGDCSRHRAAIPMRGITEPERVCDACYLALRSS 80 (84)
T ss_dssp CSCCCCTTTCCBCTTTCCBCCTTSCCEECTTTCCEECTGGGCCEEEETTTTEEEEEECCHHHHHHHHTS
T ss_pred CCccccCCCCCCCcCcCCccccchhcccccCCCcEEChHHhCCeEeccCCCCCCCCEECHHHHHHHhhc
Confidence 458999999999999999999999999999999999999999999999998789999999999998765
No 26
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.88 E-value=6.2e-23 Score=164.41 Aligned_cols=121 Identities=19% Similarity=0.285 Sum_probs=112.2
Q ss_pred CCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHH
Q 022481 167 GSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDI 246 (296)
Q Consensus 167 ~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~i 246 (296)
..+....++.|++.|.+++..+..+.+ |||+|+. |+.+++++|+++|++++.+|..|+||||+|+..|+.++
T Consensus 14 ~~g~~~~v~~Ll~~~~~~~~~~~~g~t-------~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 85 (162)
T 1ihb_A 14 ARGDLEQLTSLLQNNVNVNAQNGFGRT-------ALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDT 85 (162)
T ss_dssp HHTCHHHHHHHTTSCCCTTCCCTTSCC-------HHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred HcCCHHHHHHHHhCCCCccccCccCcc-------HHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 345667789999999999888877776 9999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCC-CCCCCC
Q 022481 247 AFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNN-VGSTTS 295 (296)
Q Consensus 247 v~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad-i~~~n~ 295 (296)
+++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|.
T Consensus 86 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 135 (162)
T 1ihb_A 86 LQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNH 135 (162)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCT
T ss_pred HHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCC
Confidence 9999999999999999999999999999999999999999998 577664
No 27
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.88 E-value=2.5e-23 Score=177.33 Aligned_cols=117 Identities=21% Similarity=0.234 Sum_probs=101.7
Q ss_pred cccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHC
Q 022481 174 FSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILMES 253 (296)
Q Consensus 174 ~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~iv~~LL~~ 253 (296)
++.|+..|+.++..+..+.. +.|+||+|+..|+.++|++|++.|+++|.+|..|+||||+|+..|+.+++++||++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~----~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ 76 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLN----PLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITA 76 (229)
T ss_dssp ---------CCCCCCCTTSC----HHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CeehhccCCCCccccccccc----hhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 35788889988877755443 56799999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCC
Q 022481 254 GANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTT 294 (296)
Q Consensus 254 ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n 294 (296)
|++++.+|..|+||||+|+..|+.+++++|+++|++++.++
T Consensus 77 ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~ 117 (229)
T 2vge_A 77 GANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATT 117 (229)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCC
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccc
Confidence 99999999999999999999999999999999999999875
No 28
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.88 E-value=1e-22 Score=166.24 Aligned_cols=126 Identities=23% Similarity=0.258 Sum_probs=116.5
Q ss_pred ccCCCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHc
Q 022481 162 TARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALF 241 (296)
Q Consensus 162 ~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~ 241 (296)
...+...+...++++|++.|++++..+..+.+ |||+|+..|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 43 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 115 (179)
T 3f6q_A 43 LHWACREGRSAVVEMLIMRGARINVMNRGDDT-------PLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFW 115 (179)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCC-------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCC-------HHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence 33444556778899999999999998877766 99999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCC
Q 022481 242 NRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTT 294 (296)
Q Consensus 242 g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n 294 (296)
|+.+++++|+++|++++.+|..|.|||++|+..++.+++++|+++|++++..+
T Consensus 116 ~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~~~ 168 (179)
T 3f6q_A 116 GQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRIP 168 (179)
T ss_dssp TCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSCBC
T ss_pred CCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCcccCC
Confidence 99999999999999999999999999999999999999999999999998654
No 29
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.88 E-value=2.3e-22 Score=174.87 Aligned_cols=98 Identities=21% Similarity=0.247 Sum_probs=93.3
Q ss_pred ChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCC-CCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCc
Q 022481 198 NGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQ-GMSLLHLAALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQ 276 (296)
Q Consensus 198 ~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~-g~TpLh~A~~~g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~ 276 (296)
|.||||+|+..|+.++|++|+++|++++..+.. |+||||+|+..|+.+++++||++|++++.+|..|+||||+|+..|+
T Consensus 158 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~ 237 (282)
T 1oy3_D 158 GHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPN 237 (282)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSC
T ss_pred CcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCC
Confidence 445999999999999999999999999999855 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCC
Q 022481 277 YKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 277 ~~iv~~Ll~~gadi~~~n~ 295 (296)
.+++++|+++||+++.+|.
T Consensus 238 ~~~v~~Ll~~ga~~~~~~~ 256 (282)
T 1oy3_D 238 PILARLLRAHGAPEPEDGG 256 (282)
T ss_dssp HHHHHHHHHTTCCCCCCC-
T ss_pred cHHHHHHHHcCCCcCcCCC
Confidence 9999999999999998874
No 30
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.88 E-value=5.8e-23 Score=166.46 Aligned_cols=126 Identities=20% Similarity=0.149 Sum_probs=115.7
Q ss_pred ccCCCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHc
Q 022481 162 TARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALF 241 (296)
Q Consensus 162 ~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~ 241 (296)
...+...+...++++|++.|++++..+..+.+ |||+|+..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 40 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 112 (172)
T 3v30_A 40 LIWASAFGEIETVRFLLEWGADPHILAKERES-------ALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRG 112 (172)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCC-------HHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCchhhcccCCC-------HHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 33344556778899999999999998877766 99999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCC
Q 022481 242 NRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTT 294 (296)
Q Consensus 242 g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n 294 (296)
|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+++...|
T Consensus 113 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~ 165 (172)
T 3v30_A 113 NHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSN 165 (172)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC-
T ss_pred CCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999877665
No 31
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.87 E-value=3.7e-22 Score=174.24 Aligned_cols=117 Identities=19% Similarity=0.207 Sum_probs=105.4
Q ss_pred cCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHH
Q 022481 172 SNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILM 251 (296)
Q Consensus 172 ~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~iv~~LL 251 (296)
.++..|+..|+++|..+..|.+ |||+|+..|+.++|++|++.|++++..+..|.||||+|+..++.+++++|+
T Consensus 67 ~~v~~Ll~~Gadvn~~d~~G~T-------pLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 139 (269)
T 4b93_B 67 KRLAKVPASGLGVNVTSQDGSS-------PLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLL 139 (269)
T ss_dssp --------CCCCTTCCCTTSCC-------HHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCcCCCCCC-------HHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHH
Confidence 4678899999999999887776 999999999999999999999999999999999999999999999999999
Q ss_pred HCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 252 ESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 252 ~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
++|+++|.+|..|+||||+|+..|+.++|++|+++|+|+|.+|.
T Consensus 140 ~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~ 183 (269)
T 4b93_B 140 DSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNN 183 (269)
T ss_dssp HTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCT
T ss_pred HCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCcccc
Confidence 99999999999999999999999999999999999999998764
No 32
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.87 E-value=3.3e-22 Score=160.88 Aligned_cols=119 Identities=21% Similarity=0.248 Sum_probs=108.5
Q ss_pred ccCCCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHc
Q 022481 162 TARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALF 241 (296)
Q Consensus 162 ~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~ 241 (296)
...+...+...++++|++.|.+++..+..+.+ |||+|+..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 46 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 118 (165)
T 3twr_A 46 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLV-------PLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAK 118 (165)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHcChHHHHHHHHhcCCCCCccCCCCCC-------HHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHc
Confidence 33444556778899999999999998887776 99999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCC
Q 022481 242 NRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKN 288 (296)
Q Consensus 242 g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga 288 (296)
|+.+++++|+++|++++.+|..|+||||+|.. ++.+++++|+++||
T Consensus 119 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 119 GKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred CCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 99999999999999999999999999999877 89999999999987
No 33
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.87 E-value=5.7e-22 Score=167.77 Aligned_cols=124 Identities=15% Similarity=0.159 Sum_probs=113.6
Q ss_pred CCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCH
Q 022481 165 SRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRT 244 (296)
Q Consensus 165 ~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~ 244 (296)
+...+...++++|++.|.+++..+..+.+ |||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.
T Consensus 80 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 152 (231)
T 3aji_A 80 AASAGXDEIVKALLVKGAHVNAVNQNGCT-------PLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNL 152 (231)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred HHHcCHHHHHHHHHHcCCCCCCCCCCCCC-------HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCH
Confidence 33445667889999999999888777666 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 245 DIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 245 ~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 153 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 203 (231)
T 3aji_A 153 KMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENK 203 (231)
T ss_dssp HHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCT
T ss_pred HHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999998874
No 34
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.87 E-value=1e-22 Score=174.26 Aligned_cols=126 Identities=21% Similarity=0.155 Sum_probs=115.3
Q ss_pred ccCCCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHc
Q 022481 162 TARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALF 241 (296)
Q Consensus 162 ~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~ 241 (296)
...++..+...+++.|++.|++++..+..+.+ |||+|+..|+.+++++||++|+++|.+|..|+||||+|+..
T Consensus 41 L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t-------~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~ 113 (239)
T 1ycs_B 41 LLDSSLEGEFDLVQRIIYEVDDPSLPNDEGIT-------ALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASC 113 (239)
T ss_dssp HHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCC-------HHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC-------HHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence 33344556778899999999999998877776 99999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHCCCCCCccCCCCC-CHhhHh--hhcCcHHHHHHHHHcCCCCCCCC
Q 022481 242 NRTDIAFILMESGANMDCKNAQGE-SPLDCA--PVTLQYKMRQKMEEDKNNVGSTT 294 (296)
Q Consensus 242 g~~~iv~~LL~~ga~~~~~d~~g~-TpL~~A--~~~g~~~iv~~Ll~~gadi~~~n 294 (296)
|+.+++++||++|++++..|..|. ||||+| +..|+.+++++|+++|++++..+
T Consensus 114 ~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~ 169 (239)
T 1ycs_B 114 NNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMN 169 (239)
T ss_dssp TCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTG
T ss_pred CCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccc
Confidence 999999999999999999998877 999999 78899999999999999988764
No 35
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.87 E-value=8.1e-22 Score=167.77 Aligned_cols=125 Identities=17% Similarity=0.142 Sum_probs=77.0
Q ss_pred cCCCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCC------CcccCCCCCcHHH
Q 022481 163 ARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVD------ANFCDKQGMSLLH 236 (296)
Q Consensus 163 ~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gad------vn~~d~~g~TpLh 236 (296)
..+...+...++++|++.|++++..+..+.+ |||+|+..|+.+++++|++.|++ ++..|..|+||||
T Consensus 50 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~ 122 (236)
T 1ikn_D 50 HLAVITNQPEIAEALLGAGCDPELRDFRGNT-------PLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLH 122 (236)
T ss_dssp HHHHHTTCHHHHHCCCSCCCCSCCCCTTCCC-------HHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC-------HHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHH
Confidence 3344456677788888888888887766655 66666666666666666655543 3444555666666
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCccCC-CCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCC
Q 022481 237 LAALFNRTDIAFILMESGANMDCKNA-QGESPLDCAPVTLQYKMRQKMEEDKNNVGSTT 294 (296)
Q Consensus 237 ~A~~~g~~~iv~~LL~~ga~~~~~d~-~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n 294 (296)
+|+..|+.+++++||++|++++.++. .|+||||+|+..|+.+++++|+++|++++.+|
T Consensus 123 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~ 181 (236)
T 1ikn_D 123 LASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVT 181 (236)
T ss_dssp HHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCC
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccc
Confidence 66666666666666666666665555 56666666666666666666666666555554
No 36
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.87 E-value=6.1e-22 Score=167.13 Aligned_cols=124 Identities=16% Similarity=0.087 Sum_probs=113.9
Q ss_pred CCCCCCCcCcccccCCC--CCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC
Q 022481 165 SRGSTSNSNFSSIFNPG--QVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFN 242 (296)
Q Consensus 165 ~~~~~~~~~~~~ll~~g--~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g 242 (296)
+...+...+++.|++.| .+.+..+..+.+ |||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 79 A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t-------~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 151 (228)
T 2dzn_A 79 ACSVGNLEVVKSLYDRPLKPDLNKITNQGVT-------CLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVG 151 (228)
T ss_dssp HHHHCCHHHHHHHHSSSSCCCTTCCCTTCCC-------HHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTT
T ss_pred HHHcCCHHHHHHHHhCCCCcccccCCcCCCC-------HHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcC
Confidence 33445677889999998 777777766665 999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCC-CCCCccCCCCCCHhhHhhhcCcHHHHHHHH-HcCCCCCCCCC
Q 022481 243 RTDIAFILMESG-ANMDCKNAQGESPLDCAPVTLQYKMRQKME-EDKNNVGSTTS 295 (296)
Q Consensus 243 ~~~iv~~LL~~g-a~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll-~~gadi~~~n~ 295 (296)
+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+ ++|++++.+|.
T Consensus 152 ~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~ 206 (228)
T 2dzn_A 152 SLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDN 206 (228)
T ss_dssp CHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCT
T ss_pred CHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCC
Confidence 999999999999 999999999999999999999999999999 89999998874
No 37
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=99.87 E-value=3.6e-23 Score=147.00 Aligned_cols=67 Identities=36% Similarity=0.719 Sum_probs=58.3
Q ss_pred CCCCCCccccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhcccC
Q 022481 3 IEPPAFQEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRTG 71 (296)
Q Consensus 3 ~~w~~~~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~~ 71 (296)
..|++|.++..|+.|+++|++|+||||||.||+|||+.|+.+++++|.+ .+++|||+.||..|....
T Consensus 11 ~~W~~d~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~~~l~~~--~~~~RVC~~C~~~l~~~~ 77 (82)
T 2yw8_A 11 HAWLKDDEATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSSNELALPSY--PKPVRVCDSCHTLLLQRC 77 (82)
T ss_dssp ----CCCCCCBCTTTCCBCBTTBCCEECTTTCCEECSGGGCEEECCTTC--SSCEEECHHHHHHTTC--
T ss_pred CccccCccCCcccCcCCcccCccccccCCCCCCEEChHHhCCeeecCCC--CCcCEECHHHHHHHHHhc
Confidence 5799999999999999999999999999999999999999999999875 589999999999987653
No 38
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.87 E-value=3.4e-22 Score=172.26 Aligned_cols=122 Identities=24% Similarity=0.271 Sum_probs=105.1
Q ss_pred CCCCCcCcccccCCCC-CCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHH
Q 022481 167 GSTSNSNFSSIFNPGQ-VTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTD 245 (296)
Q Consensus 167 ~~~~~~~~~~ll~~g~-~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~ 245 (296)
..+...++++|+..+. +++..+..+.+ |||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+
T Consensus 99 ~~~~~~~v~~Ll~~~~~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~ 171 (253)
T 1yyh_A 99 SADAQGVFQILIRNRATDLDARMHDGTT-------PLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVD 171 (253)
T ss_dssp HHTCHHHHHHHHHSTTSCTTCCCTTCCC-------HHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHH
T ss_pred HcCCHHHHHHHHHcCCCCccccCCCCCc-------HHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH
Confidence 3455566777777765 66666655555 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 246 IAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 246 iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 172 ~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~ 221 (253)
T 1yyh_A 172 AAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDH 221 (253)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccc
Confidence 99999999999999999999999999999999999999999999988774
No 39
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.87 E-value=5.9e-22 Score=160.34 Aligned_cols=118 Identities=22% Similarity=0.285 Sum_probs=109.1
Q ss_pred cCCCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC
Q 022481 163 ARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFN 242 (296)
Q Consensus 163 ~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g 242 (296)
..+...+...++++|++.|++++..+..+.+ |||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 52 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 124 (169)
T 2y1l_E 52 HLAAFNGHLEIVEVLLKNGADVNAVDHAGMT-------PLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFG 124 (169)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCccCCCCCC-------HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 3344456778899999999999988877766 999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcC
Q 022481 243 RTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDK 287 (296)
Q Consensus 243 ~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g 287 (296)
+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 125 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 125 HLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999986
No 40
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.86 E-value=3.2e-22 Score=189.25 Aligned_cols=131 Identities=20% Similarity=0.179 Sum_probs=110.7
Q ss_pred ccCCCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHH---cCCHHHHHHHHHcCCCCcccCCCCCcHHHHH
Q 022481 162 TARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIK---NGDAAAVKKLLSEGVDANFCDKQGMSLLHLA 238 (296)
Q Consensus 162 ~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~---~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A 238 (296)
...+...++...++.|+..|+++|...... .....|.||||+|+. .|+.++|++||++|+++|.+|..|+||||+|
T Consensus 136 L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~-~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A 214 (497)
T 3lvq_E 136 LWTAICNRDLLSVLEAFANGQDFGQPLPGP-DAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYA 214 (497)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSSSCBCCS-SSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHH
T ss_pred HHHHHhccCHHHHHHHHhhcccccCCCCCc-ccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHH
Confidence 344455677788999999999998762211 112245569999976 8999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCC
Q 022481 239 ALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGST 293 (296)
Q Consensus 239 ~~~g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~ 293 (296)
+..|+.+++++||++||+++.+|.+|+||||+|+..|+.+++++|+++||+++.+
T Consensus 215 ~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~ 269 (497)
T 3lvq_E 215 ALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAF 269 (497)
T ss_dssp TTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999875
No 41
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.86 E-value=1.6e-21 Score=149.04 Aligned_cols=98 Identities=31% Similarity=0.428 Sum_probs=94.7
Q ss_pred ChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcH
Q 022481 198 NGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQY 277 (296)
Q Consensus 198 ~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~ 277 (296)
|.|+||+|+..|+.+++++|+++|++++..|..|.||||+|+..++.+++++|+++|++++.+|..|+||||+|+..|+.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~ 81 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChH
Confidence 56799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCC
Q 022481 278 KMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 278 ~iv~~Ll~~gadi~~~n~ 295 (296)
+++++|+++|++++.+|.
T Consensus 82 ~~~~~Ll~~g~~~~~~~~ 99 (126)
T 1n0r_A 82 EVVKLLLEAGADVNAKDK 99 (126)
T ss_dssp HHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHHcCCCCcccCC
Confidence 999999999999998764
No 42
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.86 E-value=1e-21 Score=166.40 Aligned_cols=120 Identities=16% Similarity=0.195 Sum_probs=76.9
Q ss_pred CCCCcCcccccCC-CCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCC-----cccCCCCCcHHHHHHHc
Q 022481 168 STSNSNFSSIFNP-GQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDA-----NFCDKQGMSLLHLAALF 241 (296)
Q Consensus 168 ~~~~~~~~~ll~~-g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadv-----n~~d~~g~TpLh~A~~~ 241 (296)
.+....++.|+.. |.+++..+..+.+ |||+|+..|+.+++++|+++|+++ +..|..|+||||+|+..
T Consensus 13 ~g~~~~v~~Ll~~~g~~~~~~~~~g~t-------~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~ 85 (232)
T 2rfa_A 13 ENDVQALSKLLKFEGCEVHQRGAMGET-------ALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVIN 85 (232)
T ss_dssp TTCHHHHHHHHTTTCSCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHT
T ss_pred cCCHHHHHHHHHhcCCCcccCCCCCCC-------HHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHc
Confidence 3444556666665 6666666655554 666666666666666666666655 44555666666666666
Q ss_pred CCHHHHHHHHHCCCCCCccCC-------------CCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCC
Q 022481 242 NRTDIAFILMESGANMDCKNA-------------QGESPLDCAPVTLQYKMRQKMEEDKNNVGSTT 294 (296)
Q Consensus 242 g~~~iv~~LL~~ga~~~~~d~-------------~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n 294 (296)
|+.+++++|+++|++++..+. .|+||||+|+..|+.+++++|+++|++++.+|
T Consensus 86 ~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d 151 (232)
T 2rfa_A 86 QNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQD 151 (232)
T ss_dssp TCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred CCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Confidence 666666666666666666544 56666666666666666666666666666655
No 43
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.86 E-value=1.1e-21 Score=160.91 Aligned_cols=99 Identities=19% Similarity=0.253 Sum_probs=94.8
Q ss_pred ccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccC-CCCCCHhhHhhhc
Q 022481 196 EVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKN-AQGESPLDCAPVT 274 (296)
Q Consensus 196 ~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~iv~~LL~~ga~~~~~d-~~g~TpL~~A~~~ 274 (296)
..|.||||+|+..|+.+++++||+ |+++|.+|..|+||||+|+..|+.+++++|+++|++++.+| ..|+||||+|+..
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~ 120 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 120 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhc
Confidence 357789999999999999999999 99999999999999999999999999999999999999998 8899999999999
Q ss_pred CcHHHHHHHHHcCCCCCCCCC
Q 022481 275 LQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 275 g~~~iv~~Ll~~gadi~~~n~ 295 (296)
|+.+++++|+++|++++.+|.
T Consensus 121 ~~~~~v~~Ll~~ga~~~~~d~ 141 (183)
T 3deo_A 121 VRPEVVEALVELGADIEVEDE 141 (183)
T ss_dssp TCHHHHHHHHHHTCCTTCCCT
T ss_pred CcHHHHHHHHHcCCCCcCCCC
Confidence 999999999999999998874
No 44
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.86 E-value=1e-21 Score=156.41 Aligned_cols=113 Identities=20% Similarity=0.237 Sum_probs=88.9
Q ss_pred CCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHH
Q 022481 166 RGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTD 245 (296)
Q Consensus 166 ~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~ 245 (296)
+..+...+++.|++.|++++..+..+.+ |||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+
T Consensus 43 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 115 (156)
T 1bd8_A 43 MMFGSTAIALELLKQGASPNVQDTSGTS-------PVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTA 115 (156)
T ss_dssp SCTTCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHH
T ss_pred HHcCCHHHHHHHHHCCCCCCCcCCCCCC-------HHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHH
Confidence 4556667777788888877777766655 888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHc
Q 022481 246 IAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEED 286 (296)
Q Consensus 246 iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ 286 (296)
++++|+++ ++++.+|..|.||||+|+..|+.+++++|+++
T Consensus 116 ~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 116 VVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 88888877 88888888888888888888888888888764
No 45
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.86 E-value=9e-22 Score=156.72 Aligned_cols=118 Identities=18% Similarity=0.216 Sum_probs=106.8
Q ss_pred CCCcCcccccCC-CCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHH
Q 022481 169 TSNSNFSSIFNP-GQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIA 247 (296)
Q Consensus 169 ~~~~~~~~ll~~-g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~iv 247 (296)
+....++.|++. +.+++..+..+.+ |||+ +..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++
T Consensus 13 g~~~~v~~ll~~~~~~~~~~~~~g~t-------~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 84 (156)
T 1bd8_A 13 GDVQEVRRLLHRELVHPDALNRFGKT-------ALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTL 84 (156)
T ss_dssp TCHHHHHHHHHTTCCCTTCCCTTSCC-------HHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CCHHHHHHHHHhhCcCccccCCCCCc-------HHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHH
Confidence 455567777766 3477777766665 9999 999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 248 FILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 248 ~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
++|+++|++++.+|..|+||||+|+..|+.+++++|+++ ++++.+|.
T Consensus 85 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~ 131 (156)
T 1bd8_A 85 KVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDA 131 (156)
T ss_dssp HHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCT
T ss_pred HHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCC
Confidence 999999999999999999999999999999999999999 99988764
No 46
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.86 E-value=1.4e-21 Score=164.46 Aligned_cols=120 Identities=24% Similarity=0.275 Sum_probs=79.5
Q ss_pred CCCCcCcccccCCCC-CCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHH
Q 022481 168 STSNSNFSSIFNPGQ-VTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDI 246 (296)
Q Consensus 168 ~~~~~~~~~ll~~g~-~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~i 246 (296)
.+...++++|++.+. ..+..+..+.+ |||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.++
T Consensus 68 ~~~~~~v~~Ll~~~~~~~~~~~~~g~t-------~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 140 (223)
T 2f8y_A 68 ADAQGVFQILIRNRATDLDARMHDGTT-------PLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDA 140 (223)
T ss_dssp TTCHHHHHHHHHBTTSCTTCCCTTCCC-------HHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHH
T ss_pred cCCHHHHHHHHHcCCCCcccCCCCCCc-------HHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHH
Confidence 344555566665554 44444444443 6777777777777777777777777767667777777777777777
Q ss_pred HHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCC
Q 022481 247 AFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTT 294 (296)
Q Consensus 247 v~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n 294 (296)
+++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|
T Consensus 141 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 188 (223)
T 2f8y_A 141 AVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITD 188 (223)
T ss_dssp HHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccc
Confidence 777777777777777777777777777777777777777777766654
No 47
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.86 E-value=1.3e-21 Score=165.23 Aligned_cols=99 Identities=20% Similarity=0.199 Sum_probs=88.5
Q ss_pred cChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHC-CCCCCccCCCCCCHhhHhhhcC
Q 022481 197 VNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILMES-GANMDCKNAQGESPLDCAPVTL 275 (296)
Q Consensus 197 ~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~iv~~LL~~-ga~~~~~d~~g~TpL~~A~~~g 275 (296)
.|.|+||+|+..|+.++|++||+.|++++.+|..|+||||+|+..|+.+++++||++ |++++.+|..|+||||+|+..|
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~ 151 (222)
T 3ehr_A 72 SIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKG 151 (222)
T ss_dssp EESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHT
T ss_pred ccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcC
Confidence 346799999999999999999999999999999999999999999999999999988 9999999999999999999999
Q ss_pred cHHHHHHHHHcCCCCCCCCC
Q 022481 276 QYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 276 ~~~iv~~Ll~~gadi~~~n~ 295 (296)
+.+++++|+++|++++.+|.
T Consensus 152 ~~~~v~~Ll~~ga~~~~~~~ 171 (222)
T 3ehr_A 152 YADIVQLLLAKGARTDLRNI 171 (222)
T ss_dssp CHHHHHHHHHHTCCSCCCCT
T ss_pred CHHHHHHHHHcCCCCccccC
Confidence 99999999999999888764
No 48
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.86 E-value=1.5e-21 Score=171.56 Aligned_cols=127 Identities=17% Similarity=0.190 Sum_probs=110.4
Q ss_pred ccCCCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCC------------
Q 022481 162 TARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDK------------ 229 (296)
Q Consensus 162 ~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~------------ 229 (296)
...+...+...++++|++.|++++..+..+.+ |||+|+..|+.++|++|+++|++++..|.
T Consensus 77 L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t-------pL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 149 (299)
T 1s70_B 77 LHQACIDDNVDMVKFLVENGANINQPDNEGWI-------PLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEE 149 (299)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCc-------HHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhc
Confidence 33444556778889999999999888877666 99999999999999999999998887653
Q ss_pred ------------------------------------------------CCCcHHHHHHHcCCHHHHHHHHHCCCCCCccC
Q 022481 230 ------------------------------------------------QGMSLLHLAALFNRTDIAFILMESGANMDCKN 261 (296)
Q Consensus 230 ------------------------------------------------~g~TpLh~A~~~g~~~iv~~LL~~ga~~~~~d 261 (296)
.|.||||+|+..|+.+++++|+++|++++.+|
T Consensus 150 ~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d 229 (299)
T 1s70_B 150 AMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKD 229 (299)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCC
T ss_pred chHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcC
Confidence 46788888999999999999999999999999
Q ss_pred CCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 262 AQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 262 ~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
..|+||||+|+..|+.+++++|+++|++++++|.
T Consensus 230 ~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~ 263 (299)
T 1s70_B 230 YDGWTPLHAAAHWGKEEACRILVENLCDMEAVNK 263 (299)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCC
Confidence 9999999999999999999999999999998875
No 49
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.86 E-value=6.2e-22 Score=158.20 Aligned_cols=98 Identities=16% Similarity=0.234 Sum_probs=93.6
Q ss_pred cChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCC-HhhHhhhcC
Q 022481 197 VNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKNAQGES-PLDCAPVTL 275 (296)
Q Consensus 197 ~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~iv~~LL~~ga~~~~~d~~g~T-pL~~A~~~g 275 (296)
.+.|+||+|+..|+.++|++|+++|++++..|..|+||||+|+ .|+.+++++|+++|++++.+|..|+| |||+|+..|
T Consensus 11 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~ 89 (156)
T 1bi7_B 11 PSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREG 89 (156)
T ss_dssp CSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHT
T ss_pred cchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCC
Confidence 4556999999999999999999999999999999999999985 99999999999999999999999999 999999999
Q ss_pred cHHHHHHHHHcCCCCCCCCC
Q 022481 276 QYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 276 ~~~iv~~Ll~~gadi~~~n~ 295 (296)
+.+++++|+++|++++.+|.
T Consensus 90 ~~~~v~~Ll~~ga~~~~~d~ 109 (156)
T 1bi7_B 90 FLDTLVVLHRAGARLDVRDA 109 (156)
T ss_dssp CHHHHHHHHHHTCCSSCCCT
T ss_pred CHHHHHHHHHcCCCCcccCC
Confidence 99999999999999998874
No 50
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.86 E-value=3e-22 Score=169.10 Aligned_cols=121 Identities=21% Similarity=0.199 Sum_probs=102.0
Q ss_pred CCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCcHHHHHHHcCCHH
Q 022481 167 GSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSE-GVDANFCDKQGMSLLHLAALFNRTD 245 (296)
Q Consensus 167 ~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~-gadvn~~d~~g~TpLh~A~~~g~~~ 245 (296)
..+...+++.|++.|.+++..+..+.+ |||+|+..|+.++|++||+. |+++|.+|..|+||||+|+..|+.+
T Consensus 82 ~~g~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~ 154 (222)
T 3ehr_A 82 KRGNLSWLRECLDNRVGVNGLDKAGST-------ALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYAD 154 (222)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHH
T ss_pred ccCcHHHHHHHHhCCCCccccCCCCCC-------HHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHH
Confidence 345667789999999999988877766 99999999999999999998 9999999999999999999999999
Q ss_pred HHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCC
Q 022481 246 IAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTT 294 (296)
Q Consensus 246 iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n 294 (296)
++++||++|++++.+|..|+||||+|+..++.++++.|+++|++.+..|
T Consensus 155 ~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~ 203 (222)
T 3ehr_A 155 IVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSN 203 (222)
T ss_dssp HHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC-------------
T ss_pred HHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccc
Confidence 9999999999999999999999999999999999999999999987765
No 51
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.85 E-value=2.7e-21 Score=164.20 Aligned_cols=125 Identities=24% Similarity=0.233 Sum_probs=114.6
Q ss_pred CCCCCCCCcCcccccCCC-CCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC
Q 022481 164 RSRGSTSNSNFSSIFNPG-QVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFN 242 (296)
Q Consensus 164 ~~~~~~~~~~~~~ll~~g-~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g 242 (296)
.+...+...++++|+..| ...+..+..+.+ |||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 83 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t-------~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 155 (237)
T 3b7b_A 83 LAAKKGHYEVVQYLLSNGQMDVNCQDDGGWT-------PMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSG 155 (237)
T ss_dssp HHHHTTCHHHHHHHHTTTCCCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHC
T ss_pred HHHHcCCHHHHHHHHhCCCCCcccCCCCCCC-------HHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCC
Confidence 334456778889999988 777777766666 999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 243 RTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 243 ~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.+|+
T Consensus 156 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~ 208 (237)
T 3b7b_A 156 CVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNK 208 (237)
T ss_dssp CHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCT
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCC
Confidence 99999999999999999999999999999999999999999999999998874
No 52
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.85 E-value=9.2e-22 Score=162.45 Aligned_cols=98 Identities=14% Similarity=0.107 Sum_probs=66.5
Q ss_pred ChHHHHHHHHcCCH----HHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC------HHHHHHHHHCCCCCCccCCCCC-C
Q 022481 198 NGEGLRDAIKNGDA----AAVKKLLSEGVDANFCDKQGMSLLHLAALFNR------TDIAFILMESGANMDCKNAQGE-S 266 (296)
Q Consensus 198 ~~t~Lh~A~~~g~~----~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~------~~iv~~LL~~ga~~~~~d~~g~-T 266 (296)
|.||||+|+..|+. +++++||++|+++|.+|..|+||||+|+..++ .+++++||++||++|.+|..|+ |
T Consensus 38 g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~tt 117 (186)
T 3t8k_A 38 KSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIV 117 (186)
T ss_dssp TTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBC
T ss_pred CCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCch
Confidence 44577777777654 36777777777777777777777777776665 4567777777777777777777 7
Q ss_pred HhhHhhhc-----CcHHHHHHHHH-cCCCCCCCCC
Q 022481 267 PLDCAPVT-----LQYKMRQKMEE-DKNNVGSTTS 295 (296)
Q Consensus 267 pL~~A~~~-----g~~~iv~~Ll~-~gadi~~~n~ 295 (296)
|||+|+.. ++.+++++|++ +|+|++++|+
T Consensus 118 pLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~ 152 (186)
T 3t8k_A 118 VFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDK 152 (186)
T ss_dssp TTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCT
T ss_pred HHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCC
Confidence 77777663 23456777777 6777776664
No 53
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.85 E-value=2e-21 Score=154.55 Aligned_cols=113 Identities=21% Similarity=0.245 Sum_probs=105.3
Q ss_pred CCCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC
Q 022481 164 RSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNR 243 (296)
Q Consensus 164 ~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~ 243 (296)
.+...+...++++|++.|.+++..+..+.+ |||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 40 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 112 (153)
T 1awc_B 40 LAAQYGHFSTTEVLLRAGVSRDARTKVDRT-------PLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNH 112 (153)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCCCTTCCC-------HHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCC-------HHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 334446678899999999999988877766 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHH
Q 022481 244 TDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKM 283 (296)
Q Consensus 244 ~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~L 283 (296)
.+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 113 ~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 113 QEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 9999999999999999999999999999999999999987
No 54
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.85 E-value=2.5e-21 Score=163.81 Aligned_cols=124 Identities=26% Similarity=0.286 Sum_probs=114.3
Q ss_pred CCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCH
Q 022481 165 SRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRT 244 (296)
Q Consensus 165 ~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~ 244 (296)
+...+...++++|++.|.+++..+..+.+ |||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.
T Consensus 47 A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 119 (231)
T 3aji_A 47 ACSAGHTEIVEFLLQLGVPVNDKDDAGWS-------PLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRH 119 (231)
T ss_dssp HHHHTCHHHHHHHHHTTCCSCCCCTTSCC-------HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred HHHcCcHHHHHHHHHhCCCCCCcCCCCCC-------HHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 34456677889999999999888877766 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 245 DIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 245 ~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.+|.
T Consensus 120 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 170 (231)
T 3aji_A 120 EIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDT 170 (231)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT
T ss_pred HHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCC
Confidence 999999999999999999999999999999999999999999999998764
No 55
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.85 E-value=1.4e-21 Score=171.46 Aligned_cols=122 Identities=16% Similarity=0.180 Sum_probs=104.6
Q ss_pred CCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHc---CCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCH
Q 022481 168 STSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKN---GDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRT 244 (296)
Q Consensus 168 ~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~---g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~ 244 (296)
.++...+..++..|.+.+..... ......|.||||+|+.. |+.+++++|+++|+++|.+|..|+||||+|+..|+.
T Consensus 140 ~~d~~~~~~ll~~g~~~~~~~~l-~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~ 218 (278)
T 1dcq_A 140 TRDIFGLLQAYADGVDLTEKIPL-ANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNA 218 (278)
T ss_dssp TTCHHHHHHHHHTTCCTTSBCCC-SSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCH
T ss_pred hcccHHHHHHHHhhcchhhhccc-cccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCH
Confidence 44555567778888875543200 01122456699999999 899999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCC
Q 022481 245 DIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNV 290 (296)
Q Consensus 245 ~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi 290 (296)
+++++||++||+++.+|.+|+||||+|+..|+.+++++|+++|++.
T Consensus 219 ~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 219 ECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999999999999999999999999999999864
No 56
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.85 E-value=1.5e-21 Score=168.23 Aligned_cols=127 Identities=15% Similarity=0.132 Sum_probs=111.6
Q ss_pred ccCCCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCC-CCcccCCCCCcHHHHHHH
Q 022481 162 TARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGV-DANFCDKQGMSLLHLAAL 240 (296)
Q Consensus 162 ~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~ga-dvn~~d~~g~TpLh~A~~ 240 (296)
...++..+...++++|++.|++++..+..+.+ |||+|+..|+.+++++|+++|. +++..|..|.||||+|+.
T Consensus 61 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 133 (253)
T 1yyh_A 61 LHLAARYSRSDAAKRLLEASADANIQDNMGRT-------PLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAAR 133 (253)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC-------HHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHH
Confidence 33444556777888999999988888777666 9999999999999999999886 889999999999999999
Q ss_pred cCCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 241 FNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 241 ~g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 134 ~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 188 (253)
T 1yyh_A 134 LAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNN 188 (253)
T ss_dssp HTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred cChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 9999999999999999999999999999999999999999999999999988764
No 57
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.85 E-value=2.2e-21 Score=164.94 Aligned_cols=124 Identities=19% Similarity=0.201 Sum_probs=110.7
Q ss_pred CCCCCCCcCcccccCCCC----CCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCcHHHHHH
Q 022481 165 SRGSTSNSNFSSIFNPGQ----VTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCD-KQGMSLLHLAA 239 (296)
Q Consensus 165 ~~~~~~~~~~~~ll~~g~----~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d-~~g~TpLh~A~ 239 (296)
+...+...+++.|+..+. +.+..+..+.+ |||+|+..|+.+++++|+++|++++..+ ..|.||||+|+
T Consensus 86 A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t-------~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~ 158 (241)
T 1k1a_A 86 ACEHRSPTCLRALLDSAAPGTLDLEARNYDGLT-------ALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAV 158 (241)
T ss_dssp HHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCC-------HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCccccccccCcCCCc-------HHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHH
Confidence 334556677888888776 56666655555 9999999999999999999999999998 88999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 240 LFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 240 ~~g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 159 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 214 (241)
T 1k1a_A 159 ENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNC 214 (241)
T ss_dssp HTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999998874
No 58
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.85 E-value=9.6e-22 Score=158.46 Aligned_cols=123 Identities=22% Similarity=0.148 Sum_probs=112.7
Q ss_pred ccCCCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHc
Q 022481 162 TARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALF 241 (296)
Q Consensus 162 ~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~ 241 (296)
...+...+...++++|++.|++++..+..+.+ |||+|+..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 40 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 112 (167)
T 3v31_A 40 LMWAAAHGQIAVVEFLLQNGADPQLLGKGRES-------ALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHG 112 (167)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCC-------HHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCc-------HHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHc
Confidence 33344456778899999999999988877766 99999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCC
Q 022481 242 NRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVG 291 (296)
Q Consensus 242 g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~ 291 (296)
|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++++++.
T Consensus 113 ~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 113 NHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLL 162 (167)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999987653
No 59
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.85 E-value=2.9e-21 Score=159.96 Aligned_cols=124 Identities=17% Similarity=0.106 Sum_probs=106.5
Q ss_pred CCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHH-HcCCCCcccCCCCCcHHHHHHHcCC
Q 022481 165 SRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLL-SEGVDANFCDKQGMSLLHLAALFNR 243 (296)
Q Consensus 165 ~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll-~~gadvn~~d~~g~TpLh~A~~~g~ 243 (296)
+...+...++++|++.|++++..+..+.+ |||+|+..|+.+++++|+ ..+++++..|..|.||||+|+..|+
T Consensus 46 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-------~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~ 118 (201)
T 3hra_A 46 AVHNNDIEIAKALIDRGADINLQNSISDS-------PYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGH 118 (201)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTC
T ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCC-------HHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCC
Confidence 33445677788899999988888776666 999999999999999999 5677899899999999999999999
Q ss_pred HHHHHHHHHCC-CCCCccCCCCCCHhhHhhhcCc-----HHHHHHHHHcCCCCCCCCC
Q 022481 244 TDIAFILMESG-ANMDCKNAQGESPLDCAPVTLQ-----YKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 244 ~~iv~~LL~~g-a~~~~~d~~g~TpL~~A~~~g~-----~~iv~~Ll~~gadi~~~n~ 295 (296)
.+++++|+++| ++++.+|..|+||||+|+..++ .+++++|+++|++++.+|.
T Consensus 119 ~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~ 176 (201)
T 3hra_A 119 IDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDN 176 (201)
T ss_dssp HHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCC
Confidence 99999999998 8999999999999999998887 8999999999999988764
No 60
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=99.85 E-value=1.7e-22 Score=145.85 Aligned_cols=72 Identities=28% Similarity=0.581 Sum_probs=63.1
Q ss_pred CCCCCCCccccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhcccCCCCC
Q 022481 2 SIEPPAFQEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRTGKDNL 75 (296)
Q Consensus 2 ~~~w~~~~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~~~~~~ 75 (296)
...|++|.++..|+.|+++|++++||||||.||+|||..|+.+++++|.. .+++|||+.||..|+.......
T Consensus 11 ~p~W~~d~~~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~Cs~~~~~l~~~--~~~~RVC~~C~~~l~~~~~~~~ 82 (90)
T 3t7l_A 11 QPTWVPDSEAPNCMNCQVKFTFTKRRHHCRACGKVFCGVCCNRKCKLQYL--EKEARVCVVCYETISKAQAFER 82 (90)
T ss_dssp CCCCCCGGGCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEEEEETTT--TEEEEECHHHHHHHHHHC----
T ss_pred CCcCcccccCCcCcCCCCcccchhhCccccCCCCEECCcccCCeeecCCC--CCCCeECHHHHHHHHHHhhhcc
Confidence 35799999999999999999999999999999999999999999999875 4899999999999987755443
No 61
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.85 E-value=2.4e-21 Score=166.46 Aligned_cols=99 Identities=19% Similarity=0.253 Sum_probs=94.8
Q ss_pred ccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccC-CCCCCHhhHhhhc
Q 022481 196 EVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKN-AQGESPLDCAPVT 274 (296)
Q Consensus 196 ~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~iv~~LL~~ga~~~~~d-~~g~TpL~~A~~~ 274 (296)
..|.||||+|+..|+.++|++||+ |+++|.+|..|+||||+|+..|+.+++++||++|++++.+| ..|+||||+|+..
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~ 121 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 121 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHT
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHc
Confidence 357789999999999999999999 99999999999999999999999999999999999999998 7899999999999
Q ss_pred CcHHHHHHHHHcCCCCCCCCC
Q 022481 275 LQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 275 g~~~iv~~Ll~~gadi~~~n~ 295 (296)
|+.+++++|+++|++++.+|.
T Consensus 122 g~~~~v~~Ll~~ga~~~~~d~ 142 (244)
T 3ui2_A 122 VRPEVVEALVELGADIEVEDE 142 (244)
T ss_dssp TCHHHHHHHHHTTCCTTCCCT
T ss_pred CCHHHHHHHHHCCCCCCCCCC
Confidence 999999999999999998875
No 62
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.85 E-value=3.5e-21 Score=167.06 Aligned_cols=125 Identities=18% Similarity=0.195 Sum_probs=115.7
Q ss_pred CCCCCCCcCcccccCC-CCCCCCCCCCCccccccChHHHHHHHHcCC----HHHHHHHHHcCCCCcccCCCCCcHHHHHH
Q 022481 165 SRGSTSNSNFSSIFNP-GQVTNGATDKPRMEYEVNGEGLRDAIKNGD----AAAVKKLLSEGVDANFCDKQGMSLLHLAA 239 (296)
Q Consensus 165 ~~~~~~~~~~~~ll~~-g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~----~~~v~~Ll~~gadvn~~d~~g~TpLh~A~ 239 (296)
+...+...+++.|++. |.+++..+..+.+ +||+|+..++ .+++++|+++|++++.+|..|.||||+|+
T Consensus 155 A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t-------~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~ 227 (285)
T 1wdy_A 155 AAEKGHVEVLKILLDEMGADVNACDNMGRN-------ALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAV 227 (285)
T ss_dssp HHHHTCHHHHHHHHHTSCCCTTCCCTTSCC-------HHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHH
T ss_pred HHHcCCHHHHHHHHHhcCCCCCccCCCCCC-------HHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHH
Confidence 3344567788889876 9999988877776 9999999999 99999999999999999999999999999
Q ss_pred HcCCHHHHHHHHH-CCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCCC
Q 022481 240 LFNRTDIAFILME-SGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTSV 296 (296)
Q Consensus 240 ~~g~~~iv~~LL~-~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~l 296 (296)
..|+.+++++|++ +|++++.+|..|+||||+|+..|+.+++++|+++||+++.+|.+
T Consensus 228 ~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d~~ 285 (285)
T 1wdy_A 228 EKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDLV 285 (285)
T ss_dssp HTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSSCC
T ss_pred HcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCccccC
Confidence 9999999999999 79999999999999999999999999999999999999999864
No 63
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.85 E-value=2.6e-21 Score=179.31 Aligned_cols=124 Identities=15% Similarity=0.202 Sum_probs=113.6
Q ss_pred CCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCH
Q 022481 165 SRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRT 244 (296)
Q Consensus 165 ~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~ 244 (296)
++..+...++++|+..|++.+..+..+.+ |||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+|+.
T Consensus 252 A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t-------~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~ 324 (437)
T 1n11_A 252 AAQEGHAEMVALLLSKQANGNLGNKSGLT-------PLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNI 324 (437)
T ss_dssp HHHTTCHHHHHHHHTTTCCTTCCCTTCCC-------HHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCS
T ss_pred HHHCCCHHHHHHHHhcCCCCCCCCCCCCC-------HHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcH
Confidence 33456667788888888888887776666 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 245 DIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 245 ~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
+++++|+++|+++|.+|..|+||||+|+..|+.++|++|+++|++++.+|+
T Consensus 325 ~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~ 375 (437)
T 1n11_A 325 KLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSS 375 (437)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCS
T ss_pred HHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCC
Confidence 999999999999999999999999999999999999999999999998874
No 64
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=99.85 E-value=1.1e-22 Score=141.13 Aligned_cols=64 Identities=39% Similarity=0.867 Sum_probs=58.4
Q ss_pred CCCCCCccccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhcc
Q 022481 3 IEPPAFQEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSR 69 (296)
Q Consensus 3 ~~w~~~~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~ 69 (296)
..|+++ ..|+.|+++|++|+||||||.||+|||+.|+.+++++|.+|..+++|||+.||..++.
T Consensus 6 p~W~~~---~~C~~C~~~F~~~~RrHHCR~CG~v~C~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~ 69 (73)
T 1vfy_A 6 ADWIDS---DACMICSKKFSLLNRKHHCRSCGGVFCQEHSSNSIPLPDLGIYEPVRVCDSCFEDYEF 69 (73)
T ss_dssp -CCCCC---SBCTTTCCBCBTTBCCEECTTTCCEECGGGSCEEEEEGGGTEEEEEEECHHHHHHHHH
T ss_pred CcCccC---CcccCCCCccCCccccccCCCCCEEEcccccCCeEEcccCCCCCCCEECHHHHHHHHH
Confidence 467775 5899999999999999999999999999999999999999888899999999998764
No 65
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.85 E-value=1.8e-21 Score=169.11 Aligned_cols=125 Identities=14% Similarity=0.146 Sum_probs=108.9
Q ss_pred CCCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCC--------------------
Q 022481 164 RSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVD-------------------- 223 (296)
Q Consensus 164 ~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gad-------------------- 223 (296)
-++..+...++++|++.|++++..+..+.+ |||+|+..|+.+++++|+++|++
T Consensus 51 ~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t-------pL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (282)
T 1oy3_D 51 LAAILGEASTVEKLYAAGAGVLVAERGGHT-------ALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDT 123 (282)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSSCCCTTSCC-------HHHHHTTTTCHHHHHHHSSSCCSSCCCC---------------
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCC-------HHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcch
Confidence 334456677888999999998888777666 99999999999999999987754
Q ss_pred ---------------------------CcccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCC-CCCHhhHhhhcC
Q 022481 224 ---------------------------ANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKNAQ-GESPLDCAPVTL 275 (296)
Q Consensus 224 ---------------------------vn~~d~~g~TpLh~A~~~g~~~iv~~LL~~ga~~~~~d~~-g~TpL~~A~~~g 275 (296)
++..|..|+||||+|+..|+.+++++||++|++++..+.. |+||||+|+..|
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~ 203 (282)
T 1oy3_D 124 SHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQ 203 (282)
T ss_dssp --------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred hcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcC
Confidence 6778889999999999999999999999999999999865 999999999999
Q ss_pred cHHHHHHHHHcCCCCCCCCC
Q 022481 276 QYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 276 ~~~iv~~Ll~~gadi~~~n~ 295 (296)
+.+++++|+++|++++.+|.
T Consensus 204 ~~~~v~~Ll~~gad~~~~d~ 223 (282)
T 1oy3_D 204 AASVLELLLKAGADPTARMY 223 (282)
T ss_dssp CHHHHHHHHHTTCCTTCCCT
T ss_pred CHHHHHHHHHcCCCCccccc
Confidence 99999999999999998874
No 66
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.85 E-value=1.6e-21 Score=160.81 Aligned_cols=118 Identities=18% Similarity=0.174 Sum_probs=109.5
Q ss_pred cCCCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC
Q 022481 163 ARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFN 242 (296)
Q Consensus 163 ~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g 242 (296)
..+...+...++++|++.|++++..+..+.+ |||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 73 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 145 (192)
T 2rfm_A 73 IWAVKNNRLGIAEKLLSKGSNVNTKDFSGKT-------PLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYG 145 (192)
T ss_dssp HHHHHTTCHHHHHHHHHHTCCTTCCCTTSCC-------HHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCc-------HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence 3344456678899999999999988877766 999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcC
Q 022481 243 RTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDK 287 (296)
Q Consensus 243 ~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g 287 (296)
+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 146 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 146 RSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp CHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999875
No 67
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.85 E-value=4.7e-22 Score=171.56 Aligned_cols=125 Identities=20% Similarity=0.172 Sum_probs=106.5
Q ss_pred CCCCCcCcccccCCCCCCCCC----CCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccC--------------
Q 022481 167 GSTSNSNFSSIFNPGQVTNGA----TDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCD-------------- 228 (296)
Q Consensus 167 ~~~~~~~~~~ll~~g~~~~~~----~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d-------------- 228 (296)
..+...++++|++.|++.+.. +.........|.||||+|+..|+.++|++||++|++++..|
T Consensus 58 ~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 137 (260)
T 3jxi_A 58 SAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYF 137 (260)
T ss_dssp BTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSC
T ss_pred hcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccc
Confidence 457788899999988654321 11111122256679999999999999999999999999998
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHH---CCCCCCccCCCCCCHhhHhhhcCc---------HHHHHHHHHcCCCCC
Q 022481 229 KQGMSLLHLAALFNRTDIAFILME---SGANMDCKNAQGESPLDCAPVTLQ---------YKMRQKMEEDKNNVG 291 (296)
Q Consensus 229 ~~g~TpLh~A~~~g~~~iv~~LL~---~ga~~~~~d~~g~TpL~~A~~~g~---------~~iv~~Ll~~gadi~ 291 (296)
..|+||||+|+..|+.+++++||+ +|++++.+|..|+||||+|+..++ .+++++|+++|++++
T Consensus 138 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~ 212 (260)
T 3jxi_A 138 YFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLF 212 (260)
T ss_dssp CSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccc
Confidence 689999999999999999999999 999999999999999999998777 799999999999983
No 68
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.85 E-value=2e-22 Score=166.40 Aligned_cols=117 Identities=14% Similarity=0.079 Sum_probs=106.8
Q ss_pred cCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCC------HHHHHHHHHcCCCCcccCCCCC-cHHHHHHHcC--
Q 022481 172 SNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGD------AAAVKKLLSEGVDANFCDKQGM-SLLHLAALFN-- 242 (296)
Q Consensus 172 ~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~------~~~v~~Ll~~gadvn~~d~~g~-TpLh~A~~~g-- 242 (296)
.++++|++.|+++|..+..+++ |||+|+..|+ .+++++||++|+++|.+|..|+ ||||+|+..+
T Consensus 56 ~iv~~Ll~~Gadvn~~d~~g~T-------pLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~ 128 (186)
T 3t8k_A 56 KISMFLINKGADIKSRTKEGTT-------LFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVD 128 (186)
T ss_dssp HHHHHHHHTTCCSSCCCTTCCC-------THHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSC
T ss_pred HHHHHHHHCCCCCCCCCCCCCc-------HHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCC
Confidence 3689999999999999987777 9999999987 6889999999999999999999 9999999844
Q ss_pred ---CHHHHHHHHH-CCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 243 ---RTDIAFILME-SGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 243 ---~~~iv~~LL~-~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
+.+++++||+ +|++++.+|..|+||||+|+..|+.++|++|++...+++++++
T Consensus 129 ~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~~~~ 185 (186)
T 3t8k_A 129 ENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKEN 185 (186)
T ss_dssp HHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHTCCC-
T ss_pred hhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHhcccC
Confidence 4679999999 9999999999999999999999999999999998887777764
No 69
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.85 E-value=1.2e-20 Score=158.76 Aligned_cols=128 Identities=15% Similarity=0.130 Sum_probs=104.6
Q ss_pred cccCCCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCC-CCcccCCCCCcHHHHHH
Q 022481 161 NTARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGV-DANFCDKQGMSLLHLAA 239 (296)
Q Consensus 161 ~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~ga-dvn~~d~~g~TpLh~A~ 239 (296)
....++..+...++++|++.|++++..+..+.+ |||+|+..|+.+++++|++++. +++..+..|.||||+|+
T Consensus 28 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~ 100 (223)
T 2f8y_A 28 ALHLAARYSRSDAAKRLLEASADANIQDNMGRT-------PLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAA 100 (223)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHH
T ss_pred hHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC-------HHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHH
Confidence 344445556777788888888888777766665 8888888888888888888876 78888888888888888
Q ss_pred HcCCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 240 LFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 240 ~~g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
..++.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 101 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 156 (223)
T 2f8y_A 101 RLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNN 156 (223)
T ss_dssp HHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 88888888888888888888888888888888888888888888888888887764
No 70
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.85 E-value=6.8e-22 Score=154.33 Aligned_cols=118 Identities=21% Similarity=0.173 Sum_probs=104.5
Q ss_pred CCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCH
Q 022481 165 SRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRT 244 (296)
Q Consensus 165 ~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~ 244 (296)
++..+...++++|++.|++++..+..+.+ |||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.
T Consensus 17 A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 89 (137)
T 3c5r_A 17 ASIKGDIPSVEYLLQNGSDPNVKDHAGWT-------PLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHV 89 (137)
T ss_dssp HHHHTCHHHHHHHHHTTCCSCCCCTTSCC-------HHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCH
T ss_pred HHHcCCHHHHHHHHHcCCCCCcCCCCCCC-------HHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCCH
Confidence 33446677889999999999988877766 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCC
Q 022481 245 DIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNN 289 (296)
Q Consensus 245 ~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad 289 (296)
+++++|+++|++++.+|..|.||||+|+..+..+++++|.+.+..
T Consensus 90 ~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s 134 (137)
T 3c5r_A 90 DIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS 134 (137)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC------
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccccC
Confidence 999999999999999999999999999999999999988877654
No 71
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.85 E-value=1e-21 Score=169.19 Aligned_cols=127 Identities=17% Similarity=0.180 Sum_probs=109.8
Q ss_pred CCCcCcccccCCCCCCCCCCCC----CccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCC-------------C
Q 022481 169 TSNSNFSSIFNPGQVTNGATDK----PRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQ-------------G 231 (296)
Q Consensus 169 ~~~~~~~~ll~~g~~~~~~~~~----~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~-------------g 231 (296)
+...++++|++.|++.+..+.. .......|.||||+|+..|+.+++++|+++|++++.+|.. |
T Consensus 57 g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g 136 (256)
T 2etb_A 57 GVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFG 136 (256)
T ss_dssp TBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSC
T ss_pred chHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCC
Confidence 6778899999998887644310 0011124566999999999999999999999999999886 9
Q ss_pred CcHHHHHHHcCCHHHHHHHHH---CCCCCCccCCCCCCHhhHhhh--cCcHH-------HHHHHHHcCCCC-------CC
Q 022481 232 MSLLHLAALFNRTDIAFILME---SGANMDCKNAQGESPLDCAPV--TLQYK-------MRQKMEEDKNNV-------GS 292 (296)
Q Consensus 232 ~TpLh~A~~~g~~~iv~~LL~---~ga~~~~~d~~g~TpL~~A~~--~g~~~-------iv~~Ll~~gadi-------~~ 292 (296)
+||||+|+..|+.+++++||+ +|++++.+|..|+||||+|+. .++.+ ++++|+++|+++ +.
T Consensus 137 ~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~ 216 (256)
T 2etb_A 137 ELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEI 216 (256)
T ss_dssp SSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGC
T ss_pred CCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccc
Confidence 999999999999999999999 999999999999999999998 78888 999999999999 66
Q ss_pred CCC
Q 022481 293 TTS 295 (296)
Q Consensus 293 ~n~ 295 (296)
+|.
T Consensus 217 ~d~ 219 (256)
T 2etb_A 217 SNH 219 (256)
T ss_dssp CCT
T ss_pred cCC
Confidence 664
No 72
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.84 E-value=4.9e-21 Score=165.80 Aligned_cols=115 Identities=24% Similarity=0.203 Sum_probs=59.4
Q ss_pred CCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHH
Q 022481 169 TSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAF 248 (296)
Q Consensus 169 ~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~iv~ 248 (296)
+...+++.|++.|++++..+..+.+ |||+|+..|+.+++++|+++|++++. +..|.||||+|+..|+.++++
T Consensus 47 g~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~ 118 (261)
T 2xai_A 47 GHLSCVKILLKHGAQVNGVTADWHT-------PLFNACVSGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVN 118 (261)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHHTCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHH
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCC-------HHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHH
Confidence 3334444455555544444443333 55555555555555555555555542 233555555555555555555
Q ss_pred HHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCC
Q 022481 249 ILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVG 291 (296)
Q Consensus 249 ~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~ 291 (296)
+|+++|++++..|..|+||||+|+..|+.+++++|+++|++++
T Consensus 119 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 161 (261)
T 2xai_A 119 SLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN 161 (261)
T ss_dssp HHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTT
T ss_pred HHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 5555555555555555555555555555555555555555554
No 73
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.84 E-value=4.3e-21 Score=166.17 Aligned_cols=123 Identities=16% Similarity=0.157 Sum_probs=111.2
Q ss_pred CCCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC
Q 022481 164 RSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNR 243 (296)
Q Consensus 164 ~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~ 243 (296)
.+...+...+++.|++.|++.+..+ . |.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+
T Consensus 75 ~A~~~~~~~~v~~Ll~~g~~~~~~~-~-------g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 146 (261)
T 2xai_A 75 NACVSGSWDCVNLLLQHGASVQPES-D-------LASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQ 146 (261)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSSCSC-T-------TCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCCC-C-------CCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCC
Confidence 3344567788999999999887533 2 4459999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 244 TDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 244 ~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
.+++++|+++|++++. |..|+||||+|+..|+.+++++|+++|+|++.+|.
T Consensus 147 ~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~ 197 (261)
T 2xai_A 147 RACVKKLLESGADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNA 197 (261)
T ss_dssp HHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 9999999999999995 88999999999999999999999999999999875
No 74
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.84 E-value=1.5e-21 Score=177.63 Aligned_cols=118 Identities=22% Similarity=0.320 Sum_probs=108.2
Q ss_pred CCCC-CCCcCcccccCCCCCCCCCC--CCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHc
Q 022481 165 SRGS-TSNSNFSSIFNPGQVTNGAT--DKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALF 241 (296)
Q Consensus 165 ~~~~-~~~~~~~~ll~~g~~~~~~~--~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~ 241 (296)
++.. +...+++.|+..|++++..+ ..+.+ |||+|+..|+.++|++||++|+++|.+|..|+||||+|+..
T Consensus 206 Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~T-------pLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~ 278 (368)
T 3jue_A 206 ASGHPPSLPTMADALAHGADVNWVNGGQDNAT-------PLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATIL 278 (368)
T ss_dssp HTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCC-------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHccCCHHHHHHHHHcCCCCCccccccCCCC-------HHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 4445 77788999999999999877 44444 99999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCC
Q 022481 242 NRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNN 289 (296)
Q Consensus 242 g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad 289 (296)
|+.+++++||++|++++.+|.+|.||||+|+..|+.+++++|++++..
T Consensus 279 g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 279 GHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMR 326 (368)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred CcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999987643
No 75
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.84 E-value=4.9e-21 Score=162.26 Aligned_cols=123 Identities=15% Similarity=0.142 Sum_probs=108.3
Q ss_pred ccCCCCCCCCcCcccccCCCCCC-----CCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCC-------
Q 022481 162 TARSRGSTSNSNFSSIFNPGQVT-----NGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDK------- 229 (296)
Q Consensus 162 ~~~~~~~~~~~~~~~ll~~g~~~-----~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~------- 229 (296)
..-+...+...++++|++.|++. +..+.. |.||||+|+..|+.+++++|+++|++++..+.
T Consensus 41 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~-------g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~ 113 (232)
T 2rfa_A 41 LHIAALYDNLEAAMVLMEAAPELVFEPMTSELYE-------GQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYR 113 (232)
T ss_dssp HHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTT-------TCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCC
T ss_pred HHHHHHcCCHHHHHHHHHcCchhccccccccCCC-------CcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeec
Confidence 33444556778899999999876 333334 44599999999999999999999999998876
Q ss_pred ------CCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHH----HHHHHcCCCCC
Q 022481 230 ------QGMSLLHLAALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMR----QKMEEDKNNVG 291 (296)
Q Consensus 230 ------~g~TpLh~A~~~g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv----~~Ll~~gadi~ 291 (296)
.|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++ ++|+++|++++
T Consensus 114 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~ 185 (232)
T 2rfa_A 114 PHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDH 185 (232)
T ss_dssp TTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCS
T ss_pred ccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchh
Confidence 799999999999999999999999999999999999999999999999988 99999999884
No 76
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.84 E-value=4.4e-21 Score=168.58 Aligned_cols=127 Identities=22% Similarity=0.220 Sum_probs=111.5
Q ss_pred ccCCCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHc
Q 022481 162 TARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALF 241 (296)
Q Consensus 162 ~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~ 241 (296)
...+...+....++.|+..|++++..+..+.+ |||+|+..|+.++|++|+++|++++..|..|+||||+|+..
T Consensus 44 l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~ 116 (299)
T 1s70_B 44 FLAACSSGDTEEVLRLLERGADINYANVDGLT-------ALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASC 116 (299)
T ss_dssp HHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCB-------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccCCCCCC-------HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Confidence 33444557788899999999999888877666 99999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHCCCCCCccCC-----------------------------------------------------------
Q 022481 242 NRTDIAFILMESGANMDCKNA----------------------------------------------------------- 262 (296)
Q Consensus 242 g~~~iv~~LL~~ga~~~~~d~----------------------------------------------------------- 262 (296)
|+.+++++|+++|++++..|.
T Consensus 117 g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 196 (299)
T 1s70_B 117 GYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHA 196 (299)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCT
T ss_pred CCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhc
Confidence 999999999999999887664
Q ss_pred -CCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 263 -QGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 263 -~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
.|.||||+|+..|+.+++++|+++|++++.+|.
T Consensus 197 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~ 230 (299)
T 1s70_B 197 KSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDY 230 (299)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCT
T ss_pred CCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCC
Confidence 466778888888999999999999999998864
No 77
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.84 E-value=9.3e-21 Score=142.65 Aligned_cols=87 Identities=25% Similarity=0.395 Sum_probs=84.2
Q ss_pred cChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCc
Q 022481 197 VNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQ 276 (296)
Q Consensus 197 ~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~ 276 (296)
.|+|+||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++||++|++++.+|..|+||||+|+..|+
T Consensus 23 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~ 102 (110)
T 2zgd_A 23 DLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGN 102 (110)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHcCC
Confidence 45669999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 022481 277 YKMRQKM 283 (296)
Q Consensus 277 ~~iv~~L 283 (296)
.+++++|
T Consensus 103 ~~~~~~L 109 (110)
T 2zgd_A 103 EDLAEIL 109 (110)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999987
No 78
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.84 E-value=1.3e-21 Score=170.26 Aligned_cols=132 Identities=17% Similarity=0.112 Sum_probs=111.6
Q ss_pred cccCCCCCCCCcCcccccCCCCCCCCCCCCCc-------cccccChHHHHHHHHcCCHHHHHHHHH---cCCCCcccCCC
Q 022481 161 NTARSRGSTSNSNFSSIFNPGQVTNGATDKPR-------MEYEVNGEGLRDAIKNGDAAAVKKLLS---EGVDANFCDKQ 230 (296)
Q Consensus 161 ~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~-------~~~~~~~t~Lh~A~~~g~~~~v~~Ll~---~gadvn~~d~~ 230 (296)
.+..+...+...++++|++.|++++..+..+. ..+..|.||||+|+..|+.++|++||+ +|++++.+|..
T Consensus 104 pL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~ 183 (273)
T 2pnn_A 104 ALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSV 183 (273)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTT
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCC
Confidence 34444556778889999999999998876211 111245669999999999999999999 99999999999
Q ss_pred CCcHHHHHHHcCC---------HHHHHHHHHCCCCCC-------ccCCCCCCHhhHhhhcCcHHHHHHHHHcCC-CCCC
Q 022481 231 GMSLLHLAALFNR---------TDIAFILMESGANMD-------CKNAQGESPLDCAPVTLQYKMRQKMEEDKN-NVGS 292 (296)
Q Consensus 231 g~TpLh~A~~~g~---------~~iv~~LL~~ga~~~-------~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga-di~~ 292 (296)
|+||||+|+..|+ .+++++||++|++++ .+|..|+||||+|+..|+.+++++|+++|| |+..
T Consensus 184 g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~ 262 (273)
T 2pnn_A 184 GNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPEC 262 (273)
T ss_dssp SCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC----
T ss_pred CCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchh
Confidence 9999999999988 899999999999997 489999999999999999999999999999 6654
No 79
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.84 E-value=1.2e-20 Score=168.77 Aligned_cols=121 Identities=17% Similarity=0.200 Sum_probs=109.4
Q ss_pred CCCCcCcccccC-CCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHH
Q 022481 168 STSNSNFSSIFN-PGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDI 246 (296)
Q Consensus 168 ~~~~~~~~~ll~-~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~i 246 (296)
.+....++.|+. .+.+++..+..+.+ |||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.++
T Consensus 34 ~g~~~~v~~ll~~~~~~~~~~d~~g~t-------~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~i 106 (351)
T 3utm_A 34 SGNEEKLMALLTPLNVNCHASDGRKST-------PLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEV 106 (351)
T ss_dssp HTCHHHHHHHCCTTTTTCCCSSTTCCC-------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred cCCHHHHHHHHHhcCCCcccCCCCCCC-------HHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHH
Confidence 345555555554 57888887777666 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 247 AFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 247 v~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
+++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++..+.
T Consensus 107 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 155 (351)
T 3utm_A 107 TELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNC 155 (351)
T ss_dssp HHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccC
Confidence 9999999999999999999999999999999999999999999988763
No 80
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.84 E-value=5.5e-21 Score=158.25 Aligned_cols=124 Identities=17% Similarity=0.192 Sum_probs=111.4
Q ss_pred CCCCCCCcCcccccCCCC-CCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC
Q 022481 165 SRGSTSNSNFSSIFNPGQ-VTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNR 243 (296)
Q Consensus 165 ~~~~~~~~~~~~ll~~g~-~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~ 243 (296)
++..+....++.|+..+. +++..+..+.+ |||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 12 A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 84 (201)
T 3hra_A 12 AANQRDTKKVKEILQDTTYQVDEVDTEGNT-------PLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGR 84 (201)
T ss_dssp HHHTTCHHHHHHHHTCTTCCTTCCCTTSCC-------HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHhccHHHHHHHHHcCCCCCCCCCCCCCC-------HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 344556667777777765 88887776666 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH-HCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcC-CCCCCCCC
Q 022481 244 TDIAFILM-ESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDK-NNVGSTTS 295 (296)
Q Consensus 244 ~~iv~~LL-~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g-adi~~~n~ 295 (296)
.+++++|+ ..+++++..|..|.||||+|+..|+.+++++|+++| ++++.+|.
T Consensus 85 ~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 138 (201)
T 3hra_A 85 TEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQND 138 (201)
T ss_dssp HHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCT
T ss_pred HHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCC
Confidence 99999999 568899999999999999999999999999999999 99998774
No 81
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.84 E-value=2.4e-21 Score=148.48 Aligned_cols=108 Identities=19% Similarity=0.198 Sum_probs=96.8
Q ss_pred CCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCH
Q 022481 165 SRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRT 244 (296)
Q Consensus 165 ~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~ 244 (296)
+...+....++.|++.|.+++..+..+.+ |||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.
T Consensus 14 A~~~~~~~~v~~ll~~~~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~ 86 (123)
T 3aaa_C 14 ALKNGDLDEVKDYVAKGEDVNRTLEGGRK-------PLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHV 86 (123)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTSCCTTSSC-------HHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred HHHcCCHHHHHHHHHcCCCcCccCCCCCc-------HHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCH
Confidence 34456677889999999999888877766 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHH
Q 022481 245 DIAFILMESGANMDCKNAQGESPLDCAPVTLQYKM 279 (296)
Q Consensus 245 ~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~i 279 (296)
+++++|+++|++++.+|.+|+||||+|...+..++
T Consensus 87 ~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~l 121 (123)
T 3aaa_C 87 SCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKAL 121 (123)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHHH
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHHH
Confidence 99999999999999999999999999965444433
No 82
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.84 E-value=2.2e-21 Score=172.03 Aligned_cols=129 Identities=20% Similarity=0.177 Sum_probs=109.3
Q ss_pred ccCCCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHc---CCHHHHHHHHHcCCCCcccCCCCCcHHHHH
Q 022481 162 TARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKN---GDAAAVKKLLSEGVDANFCDKQGMSLLHLA 238 (296)
Q Consensus 162 ~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~---g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A 238 (296)
...+...+....+..|+..|.+++...... .....|.||||+|+.. |+.+++++||++|+++|.+|..|+||||+|
T Consensus 155 L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~-~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A 233 (301)
T 2b0o_E 155 LWTAICNRDLLSVLEAFANGQDFGQPLPGP-DAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYA 233 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTSCEECS-SSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHH
T ss_pred HhhhhhccCHHHHHHHHhcCCcccccCCCc-ccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHH
Confidence 334444566667888889998887731100 0112345599999997 899999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCC
Q 022481 239 ALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVG 291 (296)
Q Consensus 239 ~~~g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~ 291 (296)
+..|+.+++++||++|++++.+|..|+||||+|+..|+.+++++|+++|++..
T Consensus 234 ~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~~g 286 (301)
T 2b0o_E 234 ALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTF 286 (301)
T ss_dssp HHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHTT
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999998753
No 83
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.84 E-value=1.3e-20 Score=160.29 Aligned_cols=127 Identities=16% Similarity=0.120 Sum_probs=110.5
Q ss_pred ccCCCCCCCCcCcccccCCCC----CCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHH
Q 022481 162 TARSRGSTSNSNFSSIFNPGQ----VTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHL 237 (296)
Q Consensus 162 ~~~~~~~~~~~~~~~ll~~g~----~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~ 237 (296)
...++..+...+++.|+..+. .++..+..+.+ |||+|+..|+.+++++|+++|++++.+|..|+||||+
T Consensus 12 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 84 (236)
T 1ikn_D 12 LHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQT-------PLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHL 84 (236)
T ss_dssp THHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCC-------HHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHH
T ss_pred hHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCC-------HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence 334445567788888888775 56766666655 9999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHCCCC------CCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 238 AALFNRTDIAFILMESGAN------MDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 238 A~~~g~~~iv~~LL~~ga~------~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
|+..|+.+++++|+++|++ ++..|..|+||||+|+..|+.+++++|+++|++++.++.
T Consensus 85 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 148 (236)
T 1ikn_D 85 ACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEP 148 (236)
T ss_dssp HHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT
T ss_pred HHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Confidence 9999999999999999986 577888999999999999999999999999999998764
No 84
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.84 E-value=6.5e-21 Score=170.46 Aligned_cols=134 Identities=16% Similarity=0.163 Sum_probs=118.0
Q ss_pred ccCCCCCCCCcCcccccCCCCCCCCCCCCCccc-----------------------------------------------
Q 022481 162 TARSRGSTSNSNFSSIFNPGQVTNGATDKPRME----------------------------------------------- 194 (296)
Q Consensus 162 ~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~----------------------------------------------- 194 (296)
...+...+...++++|++.|++++..+..+.+.
T Consensus 128 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 207 (351)
T 3utm_A 128 LHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQ 207 (351)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccC
Confidence 333445567788899999999888776555432
Q ss_pred cccChHHHHHHHHc---CCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHhhHh
Q 022481 195 YEVNGEGLRDAIKN---GDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKNAQGESPLDCA 271 (296)
Q Consensus 195 ~~~~~t~Lh~A~~~---g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A 271 (296)
...+.|+||+|+.. +..+++++|++.|+++|.+|..|+||||+|+..|+.+++++|+++|+++|.+|..|+||||+|
T Consensus 208 ~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A 287 (351)
T 3utm_A 208 PQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRA 287 (351)
T ss_dssp TTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence 23467899999999 568999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 272 PVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 272 ~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
+..|+.+++++|+++|++++++|.
T Consensus 288 ~~~~~~~~v~~Ll~~gad~~~~~~ 311 (351)
T 3utm_A 288 ALAGHLQTCRLLLSYGSDPSIISL 311 (351)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHcCcHHHHHHHHHcCCCCCCcCC
Confidence 999999999999999999999875
No 85
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.84 E-value=3.3e-21 Score=168.62 Aligned_cols=124 Identities=18% Similarity=0.195 Sum_probs=82.6
Q ss_pred cCCCCCCCCcCcccccCCCC-CCCCCCCCCcccc-------------------------------ccChHHHHHHHHcCC
Q 022481 163 ARSRGSTSNSNFSSIFNPGQ-VTNGATDKPRMEY-------------------------------EVNGEGLRDAIKNGD 210 (296)
Q Consensus 163 ~~~~~~~~~~~~~~ll~~g~-~~~~~~~~~~~~~-------------------------------~~~~t~Lh~A~~~g~ 210 (296)
..+...+...++++|++.|+ +++..+..+.+.. ..|.||||+|+..|+
T Consensus 116 h~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~ 195 (276)
T 4hbd_A 116 HYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGR 195 (276)
T ss_dssp HHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTC
T ss_pred HHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCC
Confidence 33444566677777887776 7776666554411 124557777777777
Q ss_pred HHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHH-CCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHc
Q 022481 211 AAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILME-SGANMDCKNAQGESPLDCAPVTLQYKMRQKMEED 286 (296)
Q Consensus 211 ~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~iv~~LL~-~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ 286 (296)
.++|++||++|+++|.+|..|+||||+|+..|+.+++++||+ +|++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 196 ~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ 272 (276)
T 4hbd_A 196 VDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSR 272 (276)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 777777777777777777777777777777777777777776 5777777777777777777777777777777665
No 86
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.84 E-value=5.2e-21 Score=171.38 Aligned_cols=110 Identities=19% Similarity=0.219 Sum_probs=97.1
Q ss_pred cCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCcHHHHHHHcCCHHHHHHH
Q 022481 172 SNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSE-GVDANFCDKQGMSLLHLAALFNRTDIAFIL 250 (296)
Q Consensus 172 ~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~-gadvn~~d~~g~TpLh~A~~~g~~~iv~~L 250 (296)
.++++|++.|+++|..+..+.+ |||+|+..|+.+++++|++. |+++|.+|..|+||||+|+..|+.++|++|
T Consensus 220 ~i~~lLl~~gad~n~~d~~g~t-------~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~L 292 (337)
T 4g8k_A 220 AITHLLLDHGADVNVRGERGKT-------PLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELL 292 (337)
T ss_dssp HHHHHHHHTTCCTTCCCGGGCC-------HHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHCCCCCCCcCCCCCC-------HHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 3567888999999888766665 99999999999999999975 899999999999999999999999999999
Q ss_pred HHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCC
Q 022481 251 MESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGST 293 (296)
Q Consensus 251 L~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~ 293 (296)
|++||++|.+ +|||+|+..|+.++|++||++||++|..
T Consensus 293 l~~GAd~n~~-----~~L~~A~~~~~~~iv~~Ll~~GA~~d~~ 330 (337)
T 4g8k_A 293 CKRGASTDCG-----DLVMTARRNYDHSLVKVLLSHGAKEDFH 330 (337)
T ss_dssp HTTSCSSTTC-----CHHHHHHHTTCHHHHHHHHHTTCCC---
T ss_pred HHCCCCCCCC-----CHHHHHHHcCCHHHHHHHHHCcCCCCCC
Confidence 9999999864 5999999999999999999999999864
No 87
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.84 E-value=1.1e-20 Score=169.36 Aligned_cols=117 Identities=14% Similarity=0.060 Sum_probs=94.0
Q ss_pred cCcccccCCCCCCCC-CCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC-------
Q 022481 172 SNFSSIFNPGQVTNG-ATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNR------- 243 (296)
Q Consensus 172 ~~~~~ll~~g~~~~~-~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~------- 243 (296)
.+++.|+..|+++|. .+..+.+ |||+|+..|+.++|++||++|+++|.+|..|+||||+|+..|+
T Consensus 111 ~~~~~l~~~g~dvn~~~d~~g~T-------pLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~ 183 (327)
T 1sw6_A 111 EVNDAFPNTQLNLNIPVDEHGNT-------PLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTF 183 (327)
T ss_dssp HHHHHCTTSCCCSCSCCSTTCCC-------HHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCH
T ss_pred HHHHHHHhcCCCcccccCCCCCc-------HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHH
Confidence 446677788888888 6766666 8888888888888888888888888888888888888777554
Q ss_pred ----------------------------------HHHHHHHHHCCC----------------------------------
Q 022481 244 ----------------------------------TDIAFILMESGA---------------------------------- 255 (296)
Q Consensus 244 ----------------------------------~~iv~~LL~~ga---------------------------------- 255 (296)
.+++++|++.++
T Consensus 184 ~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~ 263 (327)
T 1sw6_A 184 EALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSIL 263 (327)
T ss_dssp HHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHH
T ss_pred HHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhH
Confidence 445555555432
Q ss_pred -----------CCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 256 -----------NMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 256 -----------~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
++|.+|..|+||||+|+..|+.++|++|+++|||++++|.
T Consensus 264 ~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~ 314 (327)
T 1sw6_A 264 ENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANK 314 (327)
T ss_dssp HHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCC
Confidence 5788888999999999999999999999999999998875
No 88
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.83 E-value=1.5e-21 Score=168.47 Aligned_cols=130 Identities=16% Similarity=0.083 Sum_probs=111.6
Q ss_pred cccCCCCCCCCcCcccccCCCCCCCCCCCC-------CccccccChHHHHHHHHcCCHHHHHHHHH---cCCCCcccCCC
Q 022481 161 NTARSRGSTSNSNFSSIFNPGQVTNGATDK-------PRMEYEVNGEGLRDAIKNGDAAAVKKLLS---EGVDANFCDKQ 230 (296)
Q Consensus 161 ~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~-------~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~---~gadvn~~d~~ 230 (296)
....++..+...++++|++.|++++..+.. .......|.||||+|+..|+.++|++||+ +|+++|.+|..
T Consensus 96 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~ 175 (260)
T 3jxi_A 96 ALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSR 175 (260)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTT
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCC
Confidence 344445567788899999999999988731 00111235569999999999999999999 99999999999
Q ss_pred CCcHHHHHHHcCC---------HHHHHHHHHCCCCC-------CccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCC
Q 022481 231 GMSLLHLAALFNR---------TDIAFILMESGANM-------DCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNV 290 (296)
Q Consensus 231 g~TpLh~A~~~g~---------~~iv~~LL~~ga~~-------~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi 290 (296)
|+||||+|+..++ .+++++|+++|+++ +.+|..|+||||+|+..|+.+++++||++|++.
T Consensus 176 g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 251 (260)
T 3jxi_A 176 GNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIAD 251 (260)
T ss_dssp SCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCc
Confidence 9999999999887 79999999999999 779999999999999999999999999998754
No 89
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.83 E-value=1.2e-21 Score=177.41 Aligned_cols=120 Identities=17% Similarity=0.217 Sum_probs=111.3
Q ss_pred CCCCC--CCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCC-----CcccCCCCCcHHHH
Q 022481 165 SRGST--SNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVD-----ANFCDKQGMSLLHL 237 (296)
Q Consensus 165 ~~~~~--~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gad-----vn~~d~~g~TpLh~ 237 (296)
++..+ ...++++|++.|++++..+..+.+ |||+|+..|+.++|++||++|++ +|..|..|+||||+
T Consensus 145 A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t-------~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~ 217 (364)
T 3ljn_A 145 CVGLGPEYLEMIKILVQLGASPTAKDKADET-------PLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHW 217 (364)
T ss_dssp HHHSCGGGHHHHHHHHHHTCCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHH
T ss_pred HHHcCCchHHHHHHHHHcCCCCcccCCCCCC-------HHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHH
Confidence 33445 678899999999999998877776 99999999999999999999998 99999999999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCC
Q 022481 238 AALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVG 291 (296)
Q Consensus 238 A~~~g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~ 291 (296)
|+..|+.+++++||++|++++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 218 A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~ 271 (364)
T 3ljn_A 218 AILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFL 271 (364)
T ss_dssp HHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchh
Confidence 999999999999999999999999999999999999999999999999998753
No 90
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.83 E-value=1.9e-20 Score=158.98 Aligned_cols=125 Identities=17% Similarity=0.255 Sum_probs=110.2
Q ss_pred CCCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCcHHHHHHHcC
Q 022481 164 RSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEG-VDANFCDKQGMSLLHLAALFN 242 (296)
Q Consensus 164 ~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g-advn~~d~~g~TpLh~A~~~g 242 (296)
.+...+...++++|++.|++++..+..+.+ |||+|+..|+.+++++|++.| ++++..|..|.||||+|+..+
T Consensus 50 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~ 122 (237)
T 3b7b_A 50 EAAENNHLEAVKYLIKAGALVDPKDAEGST-------CLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYK 122 (237)
T ss_dssp HHHHTTCHHHHHHHHTTTCCCCCCCTTSCC-------HHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHhCCHHHHHHHHhCCCCCCCCCCCCCc-------HHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcC
Confidence 334456677888999999888887776666 999999999999999999988 889999999999999999999
Q ss_pred CHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 243 RTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 243 ~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.+|.
T Consensus 123 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 175 (237)
T 3b7b_A 123 HVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNI 175 (237)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCT
T ss_pred CHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999988764
No 91
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.83 E-value=1.3e-20 Score=159.01 Aligned_cols=126 Identities=21% Similarity=0.178 Sum_probs=110.6
Q ss_pred cCCCCCCCCcCcccccCCCCCCC--C-CCCCCccccccChHHHHHHHHcCCHHHHHHHHHcC--CCCcccCCCCCcHHHH
Q 022481 163 ARSRGSTSNSNFSSIFNPGQVTN--G-ATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEG--VDANFCDKQGMSLLHL 237 (296)
Q Consensus 163 ~~~~~~~~~~~~~~ll~~g~~~~--~-~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g--advn~~d~~g~TpLh~ 237 (296)
..+...+...+++.|++.|+..+ . .+..+. ||||+|+..|+.+++++|+++| ++++..|..|.||||+
T Consensus 41 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~-------t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~ 113 (228)
T 2dzn_A 41 HWSVSFQAHEITSFLLSKMENVNLDDYPDDSGW-------TPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHL 113 (228)
T ss_dssp HHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSC-------CHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHH
T ss_pred HHHHHcCCHHHHHHHHhccccccccccCCCCCC-------CHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHH
Confidence 33444567788899999984443 3 444444 4999999999999999999998 9999999999999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcC-CCCCCCCC
Q 022481 238 AALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDK-NNVGSTTS 295 (296)
Q Consensus 238 A~~~g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g-adi~~~n~ 295 (296)
|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++| ++++.+|.
T Consensus 114 A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~ 172 (228)
T 2dzn_A 114 AVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDK 172 (228)
T ss_dssp HHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCT
T ss_pred HHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCC
Confidence 99999999999999999999999999999999999999999999999999 99988764
No 92
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.83 E-value=1.8e-21 Score=167.66 Aligned_cols=130 Identities=16% Similarity=0.088 Sum_probs=112.5
Q ss_pred cccCCCCCCCCcCcccccCCCCCCCCCCCCCcccc------ccChHHHHHHHHcCCHHHHHHHHH---cCCCCcccCCCC
Q 022481 161 NTARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEY------EVNGEGLRDAIKNGDAAAVKKLLS---EGVDANFCDKQG 231 (296)
Q Consensus 161 ~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~------~~~~t~Lh~A~~~g~~~~v~~Ll~---~gadvn~~d~~g 231 (296)
....+...+...++++|++.|++++..+....... ..|.||||+|+..|+.+++++|++ +|+++|.+|..|
T Consensus 93 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g 172 (256)
T 2etb_A 93 ALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLG 172 (256)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTS
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCC
Confidence 34444556778889999999999998876521100 115569999999999999999999 999999999999
Q ss_pred CcHHHHHHH--cCCHH-------HHHHHHHCCCCC-------CccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCC
Q 022481 232 MSLLHLAAL--FNRTD-------IAFILMESGANM-------DCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNV 290 (296)
Q Consensus 232 ~TpLh~A~~--~g~~~-------iv~~LL~~ga~~-------~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi 290 (296)
+||||+|+. .++.+ ++++|+++|+++ +.+|..|+||||+|+..|+.+++++|+++|++.
T Consensus 173 ~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 173 NTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSG 247 (256)
T ss_dssp CCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC
Confidence 999999999 88888 999999999999 999999999999999999999999999998753
No 93
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.83 E-value=1.3e-20 Score=165.44 Aligned_cols=121 Identities=17% Similarity=0.141 Sum_probs=104.4
Q ss_pred CCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHH
Q 022481 166 RGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTD 245 (296)
Q Consensus 166 ~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~ 245 (296)
...+...++++|++.|++++..+ .|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+
T Consensus 133 ~~~~~~~~v~~Ll~~g~~~~~~~--------~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~ 204 (285)
T 3d9h_A 133 CVSGSWDCVNLLLQHGASVQPES--------DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRA 204 (285)
T ss_dssp HHHTCHHHHHHHHHTTCCSSCSC--------TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHH
T ss_pred HHcCHHHHHHHHHHCCCCCCCCC--------CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHH
Confidence 33456667788888877776433 2445999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 246 IAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 246 iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
++++|+++|++++. |..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 205 ~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~ 253 (285)
T 3d9h_A 205 CVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNA 253 (285)
T ss_dssp HHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC
Confidence 99999999999995 88899999999999999999999999999998875
No 94
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=99.83 E-value=1.1e-21 Score=150.20 Aligned_cols=64 Identities=36% Similarity=0.687 Sum_probs=60.2
Q ss_pred CCCCCCccccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhc
Q 022481 3 IEPPAFQEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 68 (296)
Q Consensus 3 ~~w~~~~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 68 (296)
..|+||.++..|+.|+++|++|+||||||.||+|||+.|+.+++++|.. .+++|||+.||..|+
T Consensus 61 ~~W~~d~~~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~Cs~~~~~~p~~--~~p~RVC~~C~~~l~ 124 (125)
T 1joc_A 61 RKWAEDNEVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAKNALTPSS--KKPVRVCDACFNDLQ 124 (125)
T ss_dssp CCCCCGGGCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEEECCTTC--SSCEEECHHHHHHTT
T ss_pred CccccCCCCCCCcCcCCccccccccccCCCCCeEEChHHhCCccccCCC--CCCCEeCHHHHHHhc
Confidence 5799999999999999999999999999999999999999999988864 589999999999875
No 95
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.83 E-value=9.9e-21 Score=165.55 Aligned_cols=99 Identities=17% Similarity=0.201 Sum_probs=93.9
Q ss_pred cChHHHHHHH-----HcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHhhHh
Q 022481 197 VNGEGLRDAI-----KNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKNAQGESPLDCA 271 (296)
Q Consensus 197 ~~~t~Lh~A~-----~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A 271 (296)
.|.||||+|+ ..++.+++++|++.|.+++..|..|+||||+|+..|+.+++++||++|+++|.+|..|+||||+|
T Consensus 144 ~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A 223 (276)
T 4hbd_A 144 AGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCA 223 (276)
T ss_dssp TSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHH
Confidence 0568999999 66899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCcHHHHHHHHH-cCCCCCCCCC
Q 022481 272 PVTLQYKMRQKMEE-DKNNVGSTTS 295 (296)
Q Consensus 272 ~~~g~~~iv~~Ll~-~gadi~~~n~ 295 (296)
+..|+.+++++|++ +|++++.+|.
T Consensus 224 ~~~g~~~iv~~Ll~~~gad~~~~d~ 248 (276)
T 4hbd_A 224 CEHGHKEIAGLLLAVPSCDISLTDR 248 (276)
T ss_dssp HHHTCHHHHHHHHTSTTCCTTCCCT
T ss_pred HHCCCHHHHHHHHhcCCCCCcCcCC
Confidence 99999999999999 8999998875
No 96
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.83 E-value=3.5e-21 Score=174.34 Aligned_cols=134 Identities=16% Similarity=0.139 Sum_probs=111.8
Q ss_pred ccCCCCCCCCcCcccccCC----CCCCCCCCC----------CCccccccChHHHHHHHHcC--CHHHHHHHHHcCCCCc
Q 022481 162 TARSRGSTSNSNFSSIFNP----GQVTNGATD----------KPRMEYEVNGEGLRDAIKNG--DAAAVKKLLSEGVDAN 225 (296)
Q Consensus 162 ~~~~~~~~~~~~~~~ll~~----g~~~~~~~~----------~~~~~~~~~~t~Lh~A~~~g--~~~~v~~Ll~~gadvn 225 (296)
...+...+...++++|++. |..++.... ........|.||||+|+..| +.++|++|+++|++++
T Consensus 88 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~ 167 (364)
T 3ljn_A 88 IHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPT 167 (364)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTT
T ss_pred HHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCc
Confidence 3334445666777888877 555544000 00012224556999999999 9999999999999999
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-----CCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 226 FCDKQGMSLLHLAALFNRTDIAFILMESGAN-----MDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 226 ~~d~~g~TpLh~A~~~g~~~iv~~LL~~ga~-----~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
.+|..|+||||+|+..|+.+++++||++|++ ++..|..|+||||+|+..|+.++|++|+++|+|++.+|.
T Consensus 168 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~ 242 (364)
T 3ljn_A 168 AKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDN 242 (364)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCT
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Confidence 9999999999999999999999999999999 999999999999999999999999999999999998874
No 97
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.83 E-value=2.5e-20 Score=158.42 Aligned_cols=126 Identities=20% Similarity=0.220 Sum_probs=111.8
Q ss_pred cCCCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCC----CCcccCCCCCcHHHHH
Q 022481 163 ARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGV----DANFCDKQGMSLLHLA 238 (296)
Q Consensus 163 ~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~ga----dvn~~d~~g~TpLh~A 238 (296)
..+...+...++++|++.|++++..+..+.+ |||+|+..|+.+++++|++.++ +++..|..|+||||+|
T Consensus 51 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-------~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A 123 (241)
T 1k1a_A 51 HLAVITTLPSVVRLLVTAGASPMALDRHGQT-------AAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVA 123 (241)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCccccCCCCCC-------HHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHH
Confidence 3344456777889999999998888776666 9999999999999999999887 8888999999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCccC-CCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 239 ALFNRTDIAFILMESGANMDCKN-AQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 239 ~~~g~~~iv~~LL~~ga~~~~~d-~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
+..|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|++++.+|.
T Consensus 124 ~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 181 (241)
T 1k1a_A 124 VNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMY 181 (241)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCT
T ss_pred HHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 99999999999999999999998 7899999999999999999999999999988764
No 98
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.83 E-value=3e-20 Score=161.15 Aligned_cols=120 Identities=18% Similarity=0.189 Sum_probs=110.8
Q ss_pred CCCCCcCcccccCCCCCCCCC-CCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHH
Q 022481 167 GSTSNSNFSSIFNPGQVTNGA-TDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTD 245 (296)
Q Consensus 167 ~~~~~~~~~~ll~~g~~~~~~-~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~ 245 (296)
..+....++.|++.|.+++.. +..+. ||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+
T Consensus 14 ~~g~~~~v~~Ll~~g~~~~~~~~~~g~-------t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 86 (285)
T 1wdy_A 14 QNEDVDLVQQLLEGGANVNFQEEEGGW-------TPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVK 86 (285)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTTCC-------CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred HcCCHHHHHHHHHcCCCcccccCCCCC-------cHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHH
Confidence 345667789999999988876 44444 4999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCC
Q 022481 246 IAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGST 293 (296)
Q Consensus 246 iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~ 293 (296)
++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++..
T Consensus 87 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~ 134 (285)
T 1wdy_A 87 LLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLR 134 (285)
T ss_dssp HHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccc
Confidence 999999999999999999999999999999999999999999999876
No 99
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.83 E-value=1.8e-20 Score=164.49 Aligned_cols=123 Identities=18% Similarity=0.154 Sum_probs=80.1
Q ss_pred CCCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC
Q 022481 164 RSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNR 243 (296)
Q Consensus 164 ~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~ 243 (296)
.++..+...+++.|+..|.+++..+..+.+ |||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+
T Consensus 65 ~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~ 137 (285)
T 3d9h_A 65 EAAIHGHQLSLRNLISQGWAVNIITADHVS-------PLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS 137 (285)
T ss_dssp HHHHTTCHHHHHHHHHTTCCSCEECTTCCC-------HHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTC
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCcCCCCCC-------HHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCH
Confidence 334445566677777777776666655554 7777777777777777777777777777777777777776666
Q ss_pred HHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCC
Q 022481 244 TDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTT 294 (296)
Q Consensus 244 ~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n 294 (296)
.+++++|+++|++++..+ .|.||||+|+..|+.+++++|+++|++++.+|
T Consensus 138 ~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d 187 (285)
T 3d9h_A 138 WDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKI 187 (285)
T ss_dssp HHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCB
T ss_pred HHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC
Confidence 666666666666665433 36666666666666666666666666665554
No 100
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=99.83 E-value=3.7e-21 Score=137.91 Aligned_cols=64 Identities=28% Similarity=0.648 Sum_probs=59.1
Q ss_pred CccccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhcccCC
Q 022481 8 FQEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRTGK 72 (296)
Q Consensus 8 ~~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~~~ 72 (296)
.+++..|+.|+++|++|+||||||.||+|||..|+.+++++|.++ .+++|||+.||..+.....
T Consensus 6 ~~~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~~~~lp~~g-~~~~RVC~~C~~~l~~~~~ 69 (88)
T 1wfk_A 6 SGMESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSFSALVPRAG-NTQQKVCKQCHTILTRGSS 69 (88)
T ss_dssp CCCCSBCTTTCCBCCSSSCEEECSSSCCEEETTTSCEEEEETTTT-SEEEEECHHHHHHHHHCCC
T ss_pred CCcCCCCcCcCCcccCccccccCCCCCCEEChhHcCCceeccccC-CCcCEECHHHHHHHHhccc
Confidence 567889999999999999999999999999999999999999987 5899999999999987644
No 101
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.82 E-value=3e-20 Score=152.38 Aligned_cols=116 Identities=21% Similarity=0.312 Sum_probs=102.5
Q ss_pred cCCCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCcHHHHHHHc
Q 022481 163 ARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCD-KQGMSLLHLAALF 241 (296)
Q Consensus 163 ~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d-~~g~TpLh~A~~~ 241 (296)
..+...+....++.|+. |.+++..+..+.+ |||+|+..|+.+++++|+++|+++|.+| ..|+||||+|+..
T Consensus 49 ~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t-------~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~ 120 (183)
T 3deo_A 49 WTAARKADEQALSQLLE-DRDVDAVDENGRT-------ALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 120 (183)
T ss_dssp HHHHHTTCHHHHHHHTT-TSCTTCCCTTSCC-------HHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHh-cCCCCCcCCCCCC-------HHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhc
Confidence 33444566778899999 9999988877776 9999999999999999999999999998 8899999999999
Q ss_pred CCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhc----------------CcHHHHHHHHHc
Q 022481 242 NRTDIAFILMESGANMDCKNAQGESPLDCAPVT----------------LQYKMRQKMEED 286 (296)
Q Consensus 242 g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~----------------g~~~iv~~Ll~~ 286 (296)
|+.+++++|+++|++++.+|..|+||||+|+.. |+.+++++|.++
T Consensus 121 ~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 121 VRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred CcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccCcccccHHHHHHHcCHHHHHHHHHHh
Confidence 999999999999999999999999999998764 567777777664
No 102
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.82 E-value=1.4e-20 Score=161.73 Aligned_cols=120 Identities=20% Similarity=0.281 Sum_probs=107.6
Q ss_pred ccCCCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCcHHHHHHH
Q 022481 162 TARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCD-KQGMSLLHLAAL 240 (296)
Q Consensus 162 ~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d-~~g~TpLh~A~~ 240 (296)
...++..+...+++.|+. |++++..+..+.+ |||+|+..|+.++|++||++|+++|.+| ..|+||||+|+.
T Consensus 49 L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t-------~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 49 WWTAARKADEQALSQLLE-DRDVDAVDENGRT-------ALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCB-------HHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCC-------HHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHH
Confidence 344455677788999999 9999988877766 9999999999999999999999999998 889999999999
Q ss_pred cCCHHHHHHHHHCCCCCCccCCCCCCHhhHhh----------------hcCcHHHHHHHHHcCCC
Q 022481 241 FNRTDIAFILMESGANMDCKNAQGESPLDCAP----------------VTLQYKMRQKMEEDKNN 289 (296)
Q Consensus 241 ~g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~----------------~~g~~~iv~~Ll~~gad 289 (296)
.|+.+++++||++|++++.+|..|+||||+|+ ..|+.+++++|++++.+
T Consensus 121 ~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 121 YVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 99999999999999999999999999999987 56889999999986543
No 103
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.82 E-value=1e-20 Score=166.19 Aligned_cols=119 Identities=15% Similarity=0.107 Sum_probs=88.0
Q ss_pred CCCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC
Q 022481 164 RSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNR 243 (296)
Q Consensus 164 ~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~ 243 (296)
.++..+...++++|++.|++++..+ + .||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 37 ~A~~~g~~~~v~~Ll~~g~~~~~~~--g-------~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~ 107 (285)
T 3kea_A 37 YAIADNNVRLVCTLLNAGALKNLLE--N-------EFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGN 107 (285)
T ss_dssp HHHHTTCHHHHHHHHHTTGGGSCCT--T-------CCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHhCCCCCCCCC--C-------CCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCC
Confidence 3344456666777777777776653 2 347777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHHCCCCCCccCCCC-CCHhhHhhhcCcHHHHHHHHHcCCCCC
Q 022481 244 TDIAFILMESGANMDCKNAQG-ESPLDCAPVTLQYKMRQKMEEDKNNVG 291 (296)
Q Consensus 244 ~~iv~~LL~~ga~~~~~d~~g-~TpL~~A~~~g~~~iv~~Ll~~gadi~ 291 (296)
.+++++|+++|++++..|..| .||||+|+..|+.+++++|+++|+++.
T Consensus 108 ~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 156 (285)
T 3kea_A 108 MQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF 156 (285)
T ss_dssp HHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTC
T ss_pred HHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccc
Confidence 777777777777777777777 677777777777777777777777663
No 104
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.81 E-value=8.7e-21 Score=166.63 Aligned_cols=125 Identities=14% Similarity=0.064 Sum_probs=75.7
Q ss_pred cccCCCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC-CcHHHHHH
Q 022481 161 NTARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQG-MSLLHLAA 239 (296)
Q Consensus 161 ~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g-~TpLh~A~ 239 (296)
+...++..+...++++|++.|++++..+..+.+ |||+|+..|+.+++++|+++|++++.+|..| .||||+|+
T Consensus 65 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t-------~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~ 137 (285)
T 3kea_A 65 PLHQAATLEDTKIVKILLFSGLDDSQFDDKGNT-------ALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAV 137 (285)
T ss_dssp HHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCc-------HHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHH
Confidence 344455566777888888888888877766665 7777777777777777777777777777666 46666665
Q ss_pred HcCCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCC
Q 022481 240 LFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGST 293 (296)
Q Consensus 240 ~~g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~ 293 (296)
..|+.+++++|+++|+++... ..|+||||+|+..|+.+++++|+++|++++.+
T Consensus 138 ~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~ 190 (285)
T 3kea_A 138 MLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTN 190 (285)
T ss_dssp HTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTT
T ss_pred HcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcc
Confidence 555555555555554443211 13444444444444444444444444444433
No 105
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.81 E-value=1.7e-20 Score=163.19 Aligned_cols=133 Identities=19% Similarity=0.240 Sum_probs=107.7
Q ss_pred ccccCCCCCCCCcCcccccC----CCCCCCCCCCCCccccccChHHHHHHHHc---CCHHHHHHHHHcCCCC-------c
Q 022481 160 ENTARSRGSTSNSNFSSIFN----PGQVTNGATDKPRMEYEVNGEGLRDAIKN---GDAAAVKKLLSEGVDA-------N 225 (296)
Q Consensus 160 ~~~~~~~~~~~~~~~~~ll~----~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~---g~~~~v~~Ll~~gadv-------n 225 (296)
+....++..+....++.|++ .+..++... ......|.||||+|+.. |+.++|++||++|+++ |
T Consensus 15 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~---~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~ 91 (273)
T 2pnn_A 15 RSIFDAVAQSNCQELESLLPFLQRSKKRLTDSE---FKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVN 91 (273)
T ss_dssp HHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGG---GSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHT
T ss_pred hHHHHHHHcCCHHHHHHHHHHHhhcccccCCcc---cccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhh
Confidence 34445556678888888886 444443210 01112345599999987 9999999999998652 3
Q ss_pred c----cCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCC--------------CCCCHhhHhhhcCcHHHHHHHHH--
Q 022481 226 F----CDKQGMSLLHLAALFNRTDIAFILMESGANMDCKNA--------------QGESPLDCAPVTLQYKMRQKMEE-- 285 (296)
Q Consensus 226 ~----~d~~g~TpLh~A~~~g~~~iv~~LL~~ga~~~~~d~--------------~g~TpL~~A~~~g~~~iv~~Ll~-- 285 (296)
. .|..|+||||+|+..|+.+++++||++|++++..+. .|+||||+|+..|+.+++++|++
T Consensus 92 ~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 171 (273)
T 2pnn_A 92 ASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNS 171 (273)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCS
T ss_pred cccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 2 567899999999999999999999999999999997 79999999999999999999999
Q ss_pred -cCCCCCCCCC
Q 022481 286 -DKNNVGSTTS 295 (296)
Q Consensus 286 -~gadi~~~n~ 295 (296)
+|++++.+|.
T Consensus 172 ~~gad~~~~d~ 182 (273)
T 2pnn_A 172 WQPADISARDS 182 (273)
T ss_dssp SCCCCTTCCCT
T ss_pred cCCCCceeeCC
Confidence 9999998875
No 106
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.81 E-value=4e-20 Score=165.62 Aligned_cols=124 Identities=18% Similarity=0.187 Sum_probs=110.3
Q ss_pred CCCCCCCCcCcccccC-CCCCCCCCCCCCccccccChHHHHHHHHcCC----HHHHHHHHHcCCCCcccCCCCCcHHHHH
Q 022481 164 RSRGSTSNSNFSSIFN-PGQVTNGATDKPRMEYEVNGEGLRDAIKNGD----AAAVKKLLSEGVDANFCDKQGMSLLHLA 238 (296)
Q Consensus 164 ~~~~~~~~~~~~~ll~-~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~----~~~v~~Ll~~gadvn~~d~~g~TpLh~A 238 (296)
.++..+...++++||. .|++++..+..+.+ +||+++..+. ..++++|+++|+++|.+|..|+||||+|
T Consensus 174 ~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t-------~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a 246 (337)
T 4g8k_A 174 DAAEKGHVEVLKILLDEMGADVNACDNMGRN-------ALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILA 246 (337)
T ss_dssp HHHHHTCHHHHHHHHHHSCCCTTCCCTTSCC-------HHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHH
T ss_pred HHHHCCCHHHHHHHHhccCCCcCccCCCCCc-------HHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence 3344566778888885 69999998887777 8988876543 3588999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHC-CCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCC
Q 022481 239 ALFNRTDIAFILMES-GANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTT 294 (296)
Q Consensus 239 ~~~g~~~iv~~LL~~-ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n 294 (296)
+..|+.+++++|++. |+++|.+|.+|+||||+|+..|+.++|++||++|||+|.+|
T Consensus 247 ~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~~ 303 (337)
T 4g8k_A 247 VEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 303 (337)
T ss_dssp HHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTCC
T ss_pred HHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Confidence 999999999999986 89999999999999999999999999999999999999876
No 107
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.81 E-value=4.6e-20 Score=170.83 Aligned_cols=124 Identities=23% Similarity=0.291 Sum_probs=112.2
Q ss_pred CCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCH
Q 022481 165 SRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRT 244 (296)
Q Consensus 165 ~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~ 244 (296)
+...+...+++.|++.|++++..+..+.+ |||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.
T Consensus 219 A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~ 291 (437)
T 1n11_A 219 AAKQNQVEVARSLLQYGGSANAESVQGVT-------PLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHV 291 (437)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTCCC-------HHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCC-------HHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 33445667788888888888877766665 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 245 DIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 245 ~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
+++++|+++|++++..|..|+||||+|+..|+.++|++|+++|+++|.+|.
T Consensus 292 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~ 342 (437)
T 1n11_A 292 PVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTK 342 (437)
T ss_dssp HHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999998874
No 108
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.80 E-value=6e-20 Score=167.30 Aligned_cols=98 Identities=19% Similarity=0.250 Sum_probs=79.4
Q ss_pred ChHHHHHHHHcC---CHHHHHHHHHcCCCCcc--------cCCCCCcHHHHHHHcCCHHHHHHHHHCC-CCCCccCCCCC
Q 022481 198 NGEGLRDAIKNG---DAAAVKKLLSEGVDANF--------CDKQGMSLLHLAALFNRTDIAFILMESG-ANMDCKNAQGE 265 (296)
Q Consensus 198 ~~t~Lh~A~~~g---~~~~v~~Ll~~gadvn~--------~d~~g~TpLh~A~~~g~~~iv~~LL~~g-a~~~~~d~~g~ 265 (296)
|.||||+|+..+ +.+++++|+++|++++. .|..|+||||+|+..|+.+++++||++| ++++.+|..|+
T Consensus 235 g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~ 314 (373)
T 2fo1_E 235 GMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGK 314 (373)
T ss_dssp SCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCC
T ss_pred CCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCC
Confidence 344888888877 77888888888888775 5667888888888888888888888775 88888888888
Q ss_pred CHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 266 SPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 266 TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
||||+|+..|+.++|++|+++|++++.+|.
T Consensus 315 TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~ 344 (373)
T 2fo1_E 315 TPIMLAAQEGRIEVVMYLIQQGASVEAVDA 344 (373)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSSCCCS
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCccCCCC
Confidence 888888888888888888888888887764
No 109
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.80 E-value=1.9e-19 Score=152.27 Aligned_cols=126 Identities=15% Similarity=0.087 Sum_probs=103.4
Q ss_pred cCCCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCcHHHHHHHc
Q 022481 163 ARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCD-KQGMSLLHLAALF 241 (296)
Q Consensus 163 ~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d-~~g~TpLh~A~~~ 241 (296)
..+...+....++.|++.|.+++..+..+.+ +||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..
T Consensus 14 ~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~ 86 (240)
T 3eu9_A 14 VKATQYGIYERCRELVEAGYDVRQPDKENVT-------LLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQ 86 (240)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHH
T ss_pred HHHHHcCChHHHHHHHHcCCCcCCCCCCCCC-------HHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHc
Confidence 3344556677788888888888877766665 8888888888888888888888887555 4488888888888
Q ss_pred CCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 242 NRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 242 g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.+|.
T Consensus 87 ~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~ 140 (240)
T 3eu9_A 87 GHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQ 140 (240)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCC
Confidence 888888888888888888888888888888888888888888888888887653
No 110
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.80 E-value=1.9e-19 Score=163.78 Aligned_cols=98 Identities=20% Similarity=0.262 Sum_probs=94.4
Q ss_pred ChHHHHHHHHc-CCHHHHHHHHHcCCCCcccC--CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhc
Q 022481 198 NGEGLRDAIKN-GDAAAVKKLLSEGVDANFCD--KQGMSLLHLAALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVT 274 (296)
Q Consensus 198 ~~t~Lh~A~~~-g~~~~v~~Ll~~gadvn~~d--~~g~TpLh~A~~~g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~ 274 (296)
+.|+||+|+.. |+++++++||++|+++|..+ ..|.||||+|+..|+.+++++||++|+++|..|..|+||||+|+..
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~ 278 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATIL 278 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 45699999999 99999999999999999998 8999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHcCCCCCCCCC
Q 022481 275 LQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 275 g~~~iv~~Ll~~gadi~~~n~ 295 (296)
|+.+++++||++|++++++|.
T Consensus 279 g~~~~v~~LL~~Gad~~~~d~ 299 (368)
T 3jue_A 279 GHTGLACLFLKRGADLGARDS 299 (368)
T ss_dssp TCHHHHHHHHHTTCCTTCCCT
T ss_pred CcHHHHHHHHHCcCCCCCcCC
Confidence 999999999999999998875
No 111
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.79 E-value=1.6e-19 Score=152.88 Aligned_cols=121 Identities=17% Similarity=0.178 Sum_probs=93.1
Q ss_pred CCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC-HH
Q 022481 167 GSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNR-TD 245 (296)
Q Consensus 167 ~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~-~~ 245 (296)
..+...++++|++.|++++..+..+.+ |||+|+..|+.+++++|+++|++++..|..|.||||+|+..++ .+
T Consensus 85 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t-------~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~ 157 (240)
T 3eu9_A 85 RQGHLSMVVQLMKYGADPSLIDGEGCS-------CIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVD 157 (240)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSST
T ss_pred HcCCHHHHHHHHHcCCCCcccCCCCCC-------HHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHH
Confidence 345566777888888887777666655 8888888888888888888888888888788888888775555 67
Q ss_pred HHHHHHHCCCCCCccCC-CCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCC
Q 022481 246 IAFILMESGANMDCKNA-QGESPLDCAPVTLQYKMRQKMEEDKNNVGSTT 294 (296)
Q Consensus 246 iv~~LL~~ga~~~~~d~-~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n 294 (296)
++++|+++|++++..+. .|.||||+|+..|+.+++++|+++|++++.+|
T Consensus 158 ~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 207 (240)
T 3eu9_A 158 PTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQN 207 (240)
T ss_dssp THHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBC
T ss_pred HHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 77777777888777776 77788888888888888888888888877665
No 112
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.79 E-value=2.6e-19 Score=163.04 Aligned_cols=125 Identities=17% Similarity=0.138 Sum_probs=114.3
Q ss_pred cccCCCCCCCCcCccccc--------CCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCC
Q 022481 161 NTARSRGSTSNSNFSSIF--------NPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGM 232 (296)
Q Consensus 161 ~~~~~~~~~~~~~~~~ll--------~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~ 232 (296)
.+.-++..+...+++.|+ ..|+++|..+..+.+ |||+|+..|+.++|++|+++|++++..|..|.
T Consensus 128 ~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~T-------pL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~ 200 (373)
T 2fo1_E 128 VLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENT-------PLMLAVLARRRRLVAYLMKAGADPTIYNKSER 200 (373)
T ss_dssp HHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCC-------HHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCC-------HHHHHHHcChHHHHHHHHHCCCCCcccCCCCC
Confidence 344455567777888776 789999998887776 99999999999999999999999999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHHCC---CCCCccCCCCCCHhhHhhhcC---cHHHHHHHHHcCCCCCC
Q 022481 233 SLLHLAALFNRTDIAFILMESG---ANMDCKNAQGESPLDCAPVTL---QYKMRQKMEEDKNNVGS 292 (296)
Q Consensus 233 TpLh~A~~~g~~~iv~~LL~~g---a~~~~~d~~g~TpL~~A~~~g---~~~iv~~Ll~~gadi~~ 292 (296)
||||+|+..|+.+++++|+++| ++++..|..|.||||+|+..+ +.+++++|+++|++++.
T Consensus 201 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~ 266 (373)
T 2fo1_E 201 SALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDY 266 (373)
T ss_dssp CHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSC
T ss_pred CHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCccc
Confidence 9999999999999999999998 899999999999999999988 89999999999999986
No 113
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.78 E-value=7.7e-19 Score=166.00 Aligned_cols=96 Identities=23% Similarity=0.275 Sum_probs=92.3
Q ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCccc------CCCCCcHHHHHHH---cCCHHHHHHHHHCCCCCCccCCCCCCHhhH
Q 022481 200 EGLRDAIKNGDAAAVKKLLSEGVDANFC------DKQGMSLLHLAAL---FNRTDIAFILMESGANMDCKNAQGESPLDC 270 (296)
Q Consensus 200 t~Lh~A~~~g~~~~v~~Ll~~gadvn~~------d~~g~TpLh~A~~---~g~~~iv~~LL~~ga~~~~~d~~g~TpL~~ 270 (296)
+.||.|+..|+.+.|+.||+.|+++|.. |..|+||||+|+. .|+.+++++||++|+++|.+|.+|+||||+
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~ 213 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY 213 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHH
Confidence 4899999999999999999999999988 8899999999966 899999999999999999999999999999
Q ss_pred hhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 271 APVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 271 A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
|+..|+.++|++||++|||++++|+
T Consensus 214 A~~~g~~~~v~~Ll~~ga~~~~~d~ 238 (497)
T 3lvq_E 214 AALYNQPDCLKLLLKGRALVGTVNE 238 (497)
T ss_dssp HTTTTCHHHHHHHHHTCCCCSCCCT
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 9999999999999999999999875
No 114
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.78 E-value=9e-19 Score=155.20 Aligned_cols=96 Identities=23% Similarity=0.297 Sum_probs=92.4
Q ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCcc------cCCCCCcHHHHHHHc---CCHHHHHHHHHCCCCCCccCCCCCCHhhH
Q 022481 200 EGLRDAIKNGDAAAVKKLLSEGVDANF------CDKQGMSLLHLAALF---NRTDIAFILMESGANMDCKNAQGESPLDC 270 (296)
Q Consensus 200 t~Lh~A~~~g~~~~v~~Ll~~gadvn~------~d~~g~TpLh~A~~~---g~~~iv~~LL~~ga~~~~~d~~g~TpL~~ 270 (296)
++||+|+..|+++.|+.|++.|++++. .|..|+||||+|+.. ++.+++++||++|+++|.+|..|+||||+
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~ 232 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY 232 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHH
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHH
Confidence 489999999999999999999999998 689999999999997 89999999999999999999999999999
Q ss_pred hhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 271 APVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 271 A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
|+..|+.+++++||++||+++++|.
T Consensus 233 A~~~g~~~~v~~Ll~~gad~~~~d~ 257 (301)
T 2b0o_E 233 AALYNQPDCLKLLLKGRALVGTVNE 257 (301)
T ss_dssp HHHTTCHHHHHHHHHTTCCCSCCCT
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 9999999999999999999999875
No 115
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=99.77 E-value=5.5e-20 Score=155.72 Aligned_cols=69 Identities=38% Similarity=0.928 Sum_probs=61.6
Q ss_pred CCCCCCccccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhcccC
Q 022481 3 IEPPAFQEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRTG 71 (296)
Q Consensus 3 ~~w~~~~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~~ 71 (296)
..|+.|.+...|+.|+++|++|+||||||.||+|||..|+.++.++|.++..+++|||+.||..+++..
T Consensus 156 ~~~p~W~~~~~C~~C~~~F~~~~RrhHCR~CG~v~C~~Cs~~~~~~p~~~~~~~~RVC~~C~~~l~~~~ 224 (226)
T 3zyq_A 156 ERAPDWVDAEECHRCRVQFGVMTRKHHCRACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCYEQLNRKA 224 (226)
T ss_dssp CCCCCCCCCSBCTTTCCBCBTTBCCEECTTTCCEECTTTCCEEEEEGGGTEEEEEEECHHHHHHHCC--
T ss_pred ccccccccCCCCcCcCCCCCccccccccCCCcCEeChhhcCCcccCCCCCCCCCCEeCHHHHHHhhhhc
Confidence 346667777899999999999999999999999999999999999999888899999999999997653
No 116
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.77 E-value=2e-18 Score=151.25 Aligned_cols=97 Identities=20% Similarity=0.239 Sum_probs=91.3
Q ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCCc------ccCCCCCcHHHHHHHc---CCHHHHHHHHHCCCCCCccCCCCCCHhh
Q 022481 199 GEGLRDAIKNGDAAAVKKLLSEGVDAN------FCDKQGMSLLHLAALF---NRTDIAFILMESGANMDCKNAQGESPLD 269 (296)
Q Consensus 199 ~t~Lh~A~~~g~~~~v~~Ll~~gadvn------~~d~~g~TpLh~A~~~---g~~~iv~~LL~~ga~~~~~d~~g~TpL~ 269 (296)
.++|+.|+..|+++.++.|++.|++++ ..|..|+||||+|+.. |+.+++++||++|+++|.+|..|+||||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh 210 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALH 210 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHH
Confidence 358999999999999999999999954 4588999999999999 8999999999999999999999999999
Q ss_pred HhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 270 CAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 270 ~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
+|+..|+.+++++|+++|||++.+|.
T Consensus 211 ~A~~~g~~~~v~~Ll~~gad~~~~d~ 236 (278)
T 1dcq_A 211 YCCLTDNAECLKLLLRGKASIEIANE 236 (278)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCccC
Confidence 99999999999999999999999875
No 117
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=99.76 E-value=1.3e-19 Score=153.22 Aligned_cols=64 Identities=36% Similarity=0.860 Sum_probs=58.5
Q ss_pred CCCCCCccccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhcc
Q 022481 3 IEPPAFQEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSR 69 (296)
Q Consensus 3 ~~w~~~~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~ 69 (296)
..|.+ ...|+.|+++|++|+||||||.||+|||+.|+.++.++|.++..+++|||+.||..+++
T Consensus 156 ~~W~~---~~~C~~C~~~F~~~~rrhhCr~CG~v~C~~Cs~~~~~~~~~~~~~~~RvC~~C~~~l~~ 219 (220)
T 1dvp_A 156 PNWAD---GRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAKQCPLPKYGIEKEVRVCDGCFAALQR 219 (220)
T ss_dssp CCCCC---CSBCTTTCCBCCSSSCCEECTTTCCEECSTTSCEEEEEGGGTEEEEEEECHHHHHHHHH
T ss_pred ccCCC---CCccCCCCCccCCcccccccCCcCCEEChHHhCCeeecCcCCCCCCCEeCHHHHHHHhc
Confidence 45655 47999999999999999999999999999999999999998888999999999998864
No 118
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=99.75 E-value=1e-19 Score=136.97 Aligned_cols=61 Identities=23% Similarity=0.457 Sum_probs=44.7
Q ss_pred CCCCCCCccccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhccc
Q 022481 2 SIEPPAFQEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRT 70 (296)
Q Consensus 2 ~~~w~~~~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~ 70 (296)
+.-|+||.++..|+.|+++|++++||||||.||+|||+.|+.++++ ++|||+.||..+...
T Consensus 10 ~~~~~Pd~~~~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~~~~--------~vRVC~~C~~~~~~~ 70 (120)
T 1y02_A 10 SSFPSPTGLEPSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGN--------GPRLCLLCQRFRATA 70 (120)
T ss_dssp ----------CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC------------CCEEHHHHHHHHTT
T ss_pred ccCCcCccccCcccCcCCccccccccccCCCCCCeeCHHHhCCCCC--------CceECHHHHHHHhcc
Confidence 4569999999999999999999999999999999999999998764 499999999987644
No 119
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.69 E-value=5.5e-18 Score=151.62 Aligned_cols=127 Identities=13% Similarity=0.062 Sum_probs=101.2
Q ss_pred CCCcCcccccCCCCCCCCCCCCCcccccc---------------ChHHH-----------------------HHHHHcCC
Q 022481 169 TSNSNFSSIFNPGQVTNGATDKPRMEYEV---------------NGEGL-----------------------RDAIKNGD 210 (296)
Q Consensus 169 ~~~~~~~~ll~~g~~~~~~~~~~~~~~~~---------------~~t~L-----------------------h~A~~~g~ 210 (296)
...+++++|++.|++++..+..+.+.... +.+++ |+|+..+.
T Consensus 30 ~~~dlv~~ll~~ga~i~~~~~~g~~~~~g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 109 (327)
T 1sw6_A 30 FTHDLTSDFLSSPLKIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLL 109 (327)
T ss_dssp CCTTCCCSTTTSSCCCEECBCCCCCCCHHHHHHHHHHHHHHHC-------------------------------CHHHHH
T ss_pred hcCchHHHHhhCCcccccCCCCCCcccCchhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhH
Confidence 44567888999999888877766654331 11222 44555556
Q ss_pred HHHHHHHHHcCCCCcc-cCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCc---HHHHHHHHHc
Q 022481 211 AAAVKKLLSEGVDANF-CDKQGMSLLHLAALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQ---YKMRQKMEED 286 (296)
Q Consensus 211 ~~~v~~Ll~~gadvn~-~d~~g~TpLh~A~~~g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~---~~iv~~Ll~~ 286 (296)
.+++++|++.|+++|. +|..|+||||+|+..|+.++|++||++|++++.+|..|+||||+|+..|+ .++++.|+++
T Consensus 110 ~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~ 189 (327)
T 1sw6_A 110 QEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDY 189 (327)
T ss_dssp HHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHH
T ss_pred HHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHh
Confidence 6788888899999999 89999999999999999999999999999999999999999999999998 6888888887
Q ss_pred C-CCCCCCCC
Q 022481 287 K-NNVGSTTS 295 (296)
Q Consensus 287 g-adi~~~n~ 295 (296)
+ ++++.+|.
T Consensus 190 ~~~~~~~~d~ 199 (327)
T 1sw6_A 190 LYPCLILEDS 199 (327)
T ss_dssp HGGGGGEECT
T ss_pred hhccccCCCC
Confidence 6 66766553
No 120
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.67 E-value=2.2e-17 Score=124.52 Aligned_cols=95 Identities=25% Similarity=0.305 Sum_probs=85.7
Q ss_pred CCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHH
Q 022481 167 GSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDI 246 (296)
Q Consensus 167 ~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~i 246 (296)
..+...+++.|++.|.+++..+..+.+ |||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.++
T Consensus 18 ~~~~~~~~~~Ll~~g~~~~~~d~~g~t-------~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~~~~~ 90 (115)
T 2l6b_A 18 KNGHAEEVKKLLSKGADVNARSKDGNT-------PLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEI 90 (115)
T ss_dssp HHTCHHHHHHHTTTTCCSSCCCSSSCC-------TTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTTTCHHH
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCC-------HHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHH
Confidence 345667789999999999988877766 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCCCCccCCCCCCHh
Q 022481 247 AFILMESGANMDCKNAQGESPL 268 (296)
Q Consensus 247 v~~LL~~ga~~~~~d~~g~TpL 268 (296)
+++|+++|+++|..+..|.||-
T Consensus 91 ~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 91 VKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp HHHHHTTSSSHHHHSCCCC---
T ss_pred HHHHHHcCCCCCcCCccccccc
Confidence 9999999999999999999874
No 121
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.66 E-value=1.3e-16 Score=115.84 Aligned_cols=82 Identities=32% Similarity=0.392 Sum_probs=76.1
Q ss_pred CCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHH
Q 022481 168 STSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIA 247 (296)
Q Consensus 168 ~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~iv 247 (296)
.+...++++|++.|++++..+..+.+ |||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++
T Consensus 12 ~~~~~~v~~Ll~~g~~~n~~d~~g~t-------~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~ 84 (93)
T 1n0q_A 12 NGHLEVVKLLLEAGADVNAKDKNGRT-------PLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVV 84 (93)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred cCCHHHHHHHHHcCCCCcccCCCCCC-------HHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHH
Confidence 34566788999999999998887776 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCC
Q 022481 248 FILMESGAN 256 (296)
Q Consensus 248 ~~LL~~ga~ 256 (296)
++|+++||+
T Consensus 85 ~~Ll~~ga~ 93 (93)
T 1n0q_A 85 KLLLEAGAY 93 (93)
T ss_dssp HHHHHTTCC
T ss_pred HHHHHcCCC
Confidence 999999985
No 122
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.64 E-value=6.5e-18 Score=154.08 Aligned_cols=123 Identities=11% Similarity=-0.042 Sum_probs=97.6
Q ss_pred cccCCCCCCCCcCcccccCCCCCCCCCCCCCccccccChHHHHHHHHcCCHHHHHHHHHcCCCC---cccCCCCCcHHHH
Q 022481 161 NTARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDA---NFCDKQGMSLLHL 237 (296)
Q Consensus 161 ~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~gadv---n~~d~~g~TpLh~ 237 (296)
....++..+...++++|++.|+.....+. ....+.||||+|+..|+.++|++|+++|+++ +..+.+ +||||+
T Consensus 95 ~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~----~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~ 169 (376)
T 2aja_A 95 ICFVAAITGCSSALDTLCLLLTSDEIVKV----IQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRL 169 (376)
T ss_dssp HHHHHHHHCCHHHHHHHTTC--CCSSCC------CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCcHHHHHH----hccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHH
Confidence 34445566788889999999873322211 1124567999999999999999999999763 333333 899999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCc--cCCCCCCHhhHhh-hcCcHHHHHHHHHcCC
Q 022481 238 AALFNRTDIAFILMESGANMDC--KNAQGESPLDCAP-VTLQYKMRQKMEEDKN 288 (296)
Q Consensus 238 A~~~g~~~iv~~LL~~ga~~~~--~d~~g~TpL~~A~-~~g~~~iv~~Ll~~ga 288 (296)
|+..|+.+++++|+++|++++. .|..|.||||+|+ ..|+.++|++|+++|+
T Consensus 170 Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga 223 (376)
T 2aja_A 170 AAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV 223 (376)
T ss_dssp HHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH
T ss_pred HHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC
Confidence 9999999999999999999988 8889999999999 9999999999998765
No 123
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=99.60 E-value=6.5e-17 Score=150.29 Aligned_cols=67 Identities=27% Similarity=0.665 Sum_probs=0.0
Q ss_pred CCCCCCccccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhccc
Q 022481 3 IEPPAFQEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRT 70 (296)
Q Consensus 3 ~~w~~~~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~ 70 (296)
..|.||.++..|+.|+++|++++||||||.||++||..|+.+++++|..+ .+++|||+.||..+.++
T Consensus 367 p~w~~~~~~~~c~~c~~~f~~~~r~h~Cr~Cg~~~C~~Cs~~~~~~~~~~-~~~~rvC~~C~~~l~~~ 433 (434)
T 3mpx_A 367 PTLVPVTHVMMCMNCGCDFSLTLRRHHCHACGKIVCRNCSRNKYPLKYLK-DRMAKVCDGCFGELKKR 433 (434)
T ss_dssp --------------------------------------------------------------------
T ss_pred CcCCCcccCCcCCCcCCCCCCcchhhhcccCcCEeehhhCCCeeeCCCCC-CCcCEecHHHHHHHHhC
Confidence 46999999999999999999999999999999999999999999987544 68999999999998654
No 124
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.58 E-value=2.6e-16 Score=143.42 Aligned_cols=93 Identities=12% Similarity=-0.027 Sum_probs=77.1
Q ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCC---cccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC---CccCCCCCCHhhHhh
Q 022481 199 GEGLRDAIKNGDAAAVKKLLSEGVDA---NFCDKQGMSLLHLAALFNRTDIAFILMESGANM---DCKNAQGESPLDCAP 272 (296)
Q Consensus 199 ~t~Lh~A~~~g~~~~v~~Ll~~gadv---n~~d~~g~TpLh~A~~~g~~~iv~~LL~~ga~~---~~~d~~g~TpL~~A~ 272 (296)
.||||+|+..|+.++|++|+++|+.. +..+..|.||||+|+.+|+.++|++|+++|+++ +..+.+ +||||+|+
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa 171 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAA 171 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHH
Confidence 47999999999999999999998832 234556889999999999999999999999862 333333 99999999
Q ss_pred hcCcHHHHHHHHHcCCCCCC
Q 022481 273 VTLQYKMRQKMEEDKNNVGS 292 (296)
Q Consensus 273 ~~g~~~iv~~Ll~~gadi~~ 292 (296)
..|+.++|++|+++|++++.
T Consensus 172 ~~G~~eiv~~Ll~~ga~~~~ 191 (376)
T 2aja_A 172 ENGHLHVLNRLCELAPTEAT 191 (376)
T ss_dssp HTTCHHHHHHHHHSCGGGHH
T ss_pred HCCCHHHHHHHHHcCCccch
Confidence 99999999999999998653
No 125
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.57 E-value=4.2e-15 Score=111.43 Aligned_cols=72 Identities=22% Similarity=0.228 Sum_probs=65.1
Q ss_pred CcccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHhhHhhhcCcHHHHHHHHHcCCCCCCCCC
Q 022481 224 ANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 295 (296)
Q Consensus 224 vn~~d~~g~TpLh~A~~~g~~~iv~~LL~~ga~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~n~ 295 (296)
+...|.+|.|+||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 88 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDK 88 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccc
Confidence 344678999999999999999999999999999999999999999999999999999999999999998874
No 126
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=96.92 E-value=0.00036 Score=53.34 Aligned_cols=54 Identities=17% Similarity=0.425 Sum_probs=43.7
Q ss_pred cccccccccccccc-cccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhh
Q 022481 10 EATRCDVCKCSFNT-FRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSS 67 (296)
Q Consensus 10 ~~~~C~~C~~~f~~-~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~ 67 (296)
....|..|+++|++ +.+.+.|..|..-||.+|.... ..+......+|..|+...
T Consensus 54 ~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~~~----~~~~~~~~W~C~vC~k~r 108 (134)
T 1zbd_B 54 GVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVET----SNNRPHPVWLCKICLEQR 108 (134)
T ss_dssp SSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEEC----CCSSSSCCEEEHHHHHHH
T ss_pred CCccccccCCCcccccCCCCCCCCCCcccccccCCcc----CCCCCccceechhhHHHH
Confidence 46789999999984 5799999999999999997542 122356789999999763
No 127
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=96.64 E-value=0.00065 Score=53.09 Aligned_cols=50 Identities=22% Similarity=0.569 Sum_probs=42.1
Q ss_pred ccccccccccccccc-ccccccccccceEcCCCCCCceecCCCCCCCceeccccchhh
Q 022481 10 EATRCDVCKCSFNTF-RRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNS 66 (296)
Q Consensus 10 ~~~~C~~C~~~f~~~-~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~ 66 (296)
....|..|+++|+++ ++.+-|..|..-||..|... ++ .....+|..|+..
T Consensus 67 ~~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~~~---~~----~~~~W~C~vC~k~ 117 (153)
T 2zet_C 67 NETHCARCLQPYRLLLNSRRQCLECSLFVCKSCSHA---HP----EEQGWLCDPCHLA 117 (153)
T ss_dssp GGTBCTTTCCBGGGCSSCCEECTTTCCEECGGGEEC---CS----SSSSCEEHHHHHH
T ss_pred CCccchhhcCccccccCCCCcCCCCCchhhcccccc---cC----CCCcEeeHHHHHH
Confidence 468999999999964 89999999999999999842 22 3578999999975
No 128
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=96.28 E-value=0.0035 Score=43.29 Aligned_cols=31 Identities=26% Similarity=0.686 Sum_probs=25.8
Q ss_pred ccccccccccccccccccccccccccceEcCCC
Q 022481 9 QEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEH 41 (296)
Q Consensus 9 ~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c 41 (296)
.....|..|+++.+++ -..+|| ||.+||..+
T Consensus 23 ~~~~rC~~C~kkvgl~-~~f~Cr-Cg~~FC~~H 53 (85)
T 1wff_A 23 KIMKHCFLCGKKTGLA-TSFECR-CGNNFCASH 53 (85)
T ss_dssp CCCCBCSSSCCBCSSS-SCEECT-TCCEECTTT
T ss_pred ccCccchhhCCeeccc-CCeEcC-CCCEecccC
Confidence 3568999999998886 359998 999998765
No 129
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=96.21 E-value=0.0038 Score=40.65 Aligned_cols=33 Identities=36% Similarity=0.819 Sum_probs=27.2
Q ss_pred CCCccccccccccccccccccccccccccceEcCCC
Q 022481 6 PAFQEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEH 41 (296)
Q Consensus 6 ~~~~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c 41 (296)
++......|..|.++.+++ ...|| ||.+||..+
T Consensus 10 ~~k~~~~rC~~C~kkvgl~--~f~Cr-Cg~~FC~~H 42 (64)
T 1wfh_A 10 SPPQRPNRCTVCRKRVGLT--GFMCR-CGTTFCGSH 42 (64)
T ss_dssp CCCSSCCCCTTTCCCCCTT--CEECS-SSCEECTTT
T ss_pred CCCCcCCcChhhCCccCcc--CEEee-cCCEecccc
Confidence 4455678999999998887 78995 999998765
No 130
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=95.88 E-value=0.0018 Score=61.95 Aligned_cols=41 Identities=24% Similarity=0.510 Sum_probs=36.5
Q ss_pred CCCCCccccccccccccc-cccccccccccccceEcCCCCCC
Q 022481 4 EPPAFQEATRCDVCKCSF-NTFRRRHHCRCCGRTLCHEHSSD 44 (296)
Q Consensus 4 ~w~~~~~~~~C~~C~~~f-~~~~r~hhCr~Cg~~~C~~c~~~ 44 (296)
.|.++.....|+.|++.| +++++.|||+.||.++|..|...
T Consensus 522 ~~~~~~~~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~~ 563 (587)
T 3ky9_A 522 QMFSFEETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGR 563 (587)
T ss_dssp EEECCSSCCBCTTTCSBCCSSSCCEEEETTTCCEECSGGGGG
T ss_pred eEEeCCCCcccccccccccccccCCcCCCCCCCccchhhhhc
Confidence 466778889999999987 79999999999999999999754
No 131
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=95.52 E-value=0.0086 Score=40.11 Aligned_cols=29 Identities=31% Similarity=0.816 Sum_probs=24.6
Q ss_pred cccccccccccccccccccccccccceEcCCC
Q 022481 10 EATRCDVCKCSFNTFRRRHHCRCCGRTLCHEH 41 (296)
Q Consensus 10 ~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c 41 (296)
....|..|+++.+++ ...|| ||.+||..+
T Consensus 24 ~~nRC~~CrKkvgL~--gf~Cr-Cg~~FCs~H 52 (74)
T 1wfl_A 24 KKNRCFMCRKKVGLT--GFDCR-CGNLFCGLH 52 (74)
T ss_dssp CTTBCSSSCCBCGGG--CEECT-TSCEECSSS
T ss_pred cCCcChhhCCccccc--CeecC-CCCEechhc
Confidence 456899999998887 48999 999998765
No 132
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=95.51 E-value=0.012 Score=39.41 Aligned_cols=30 Identities=37% Similarity=0.792 Sum_probs=25.6
Q ss_pred ccccccccccccccccccccccccccceEcCCC
Q 022481 9 QEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEH 41 (296)
Q Consensus 9 ~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c 41 (296)
.....|..|.++.+++ ...| .||.+||..+
T Consensus 23 ~~~~RC~~C~kkvgL~--~f~C-rCg~~FCs~H 52 (74)
T 1wfp_A 23 STATRCLSCNKKVGVT--GFKC-RCGSTFCGTH 52 (74)
T ss_dssp CCCCBCSSSCCBCTTT--CEEC-TTSCEECTTT
T ss_pred ccCccchhhcCccccc--ceEe-ccCCEecccc
Confidence 3578999999999887 7999 5999998765
No 133
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=95.33 E-value=0.011 Score=38.52 Aligned_cols=31 Identities=29% Similarity=0.759 Sum_probs=25.8
Q ss_pred CccccccccccccccccccccccccccceEcCCC
Q 022481 8 FQEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEH 41 (296)
Q Consensus 8 ~~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c 41 (296)
......|..|+++.+++ ...| .||.+||..+
T Consensus 12 ~~~~~rC~~C~kkvgl~--~f~C-rCg~~FC~~H 42 (64)
T 1wg2_A 12 VRPNNRCFSCNKKVGVM--GFKC-KCGSTFCGSH 42 (64)
T ss_dssp SCCSCSCTTTCCCCTTS--CEEC-TTSCEECSSS
T ss_pred CCcCCcChhhCCccccc--CeEe-ecCCEecccC
Confidence 34567999999998877 7899 6999998765
No 134
>2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.24 E-value=0.0049 Score=41.66 Aligned_cols=50 Identities=20% Similarity=0.541 Sum_probs=40.7
Q ss_pred cccccccccccccc-cccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhh
Q 022481 10 EATRCDVCKCSFNT-FRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSS 67 (296)
Q Consensus 10 ~~~~C~~C~~~f~~-~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~ 67 (296)
....|..|+++|++ ++|---|+.|-+-||.+|-... ......|..|++..
T Consensus 24 ~~r~CarC~~~LG~l~~~g~~C~~Ck~rVC~~Crv~~--------~~~~W~C~VC~k~~ 74 (76)
T 2csz_A 24 SDRTCARCQESLGRLSPKTNTCRGCNHLVCRDCRIQE--------SNGTWRCKVCSGPS 74 (76)
T ss_dssp CCCBCSSSCCBCSSSCTTTSEETTTTEECCTTSEEEC--------STTCEEEHHHHSSC
T ss_pred CccchhhhCccccccccCCCcCcccChhhcccccccC--------CCCCEEEeeCchhh
Confidence 35689999999995 6799999999999999996431 12678999998764
No 135
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.72 E-value=0.027 Score=37.04 Aligned_cols=32 Identities=25% Similarity=0.683 Sum_probs=25.4
Q ss_pred cccccccccccccccccc-ccccccccceEcCCC
Q 022481 9 QEATRCDVCKCSFNTFRR-RHHCRCCGRTLCHEH 41 (296)
Q Consensus 9 ~~~~~C~~C~~~f~~~~r-~hhCr~Cg~~~C~~c 41 (296)
.....|..|+++.++... -..| .||.+||..+
T Consensus 13 ~~~~rC~~C~kk~gL~~~egf~C-rCg~~FC~~H 45 (67)
T 1x4w_A 13 KSRRRCFQCQTKLELVQQELGSC-RCGYVFCMLH 45 (67)
T ss_dssp SCTTBCSSSCCBCCHHHHHHHCC-SSSCCCCTTT
T ss_pred ccCCcchhhCCeecccccCceEe-cCCCEehhcc
Confidence 356899999999886532 3789 7999998765
No 136
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=92.68 E-value=0.0039 Score=40.18 Aligned_cols=29 Identities=17% Similarity=0.496 Sum_probs=24.0
Q ss_pred ccccccccccccccccccccccceEcCCCC
Q 022481 13 RCDVCKCSFNTFRRRHHCRCCGRTLCHEHS 42 (296)
Q Consensus 13 ~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~ 42 (296)
.|..|+++|... .++.|..|+.+||.+|=
T Consensus 17 ~C~~C~~~~~~~-~~y~C~~C~~~FC~dCD 45 (59)
T 1z60_A 17 FCYGCQGELKDQ-HVYVCAVCQNVFCVDCD 45 (59)
T ss_dssp EETTTTEECTTS-EEECCTTTTCCBCHHHH
T ss_pred cccccCcccCCC-ccEECCccCcCcccchh
Confidence 599999999632 24889999999999984
No 137
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.92 E-value=0.024 Score=34.25 Aligned_cols=32 Identities=25% Similarity=0.598 Sum_probs=26.1
Q ss_pred CCCCccccccccccccccccc--cccccccccceE
Q 022481 5 PPAFQEATRCDVCKCSFNTFR--RRHHCRCCGRTL 37 (296)
Q Consensus 5 w~~~~~~~~C~~C~~~f~~~~--r~hhCr~Cg~~~ 37 (296)
|+.- .+..|..|++.|+++. |+|.|..||.++
T Consensus 7 ~~~~-~~~~CPrCn~~f~~~~sLr~HmkycCp~~v 40 (49)
T 2e72_A 7 GQDG-GRKICPRCNAQFRVTEALRGHMCYCCPEMV 40 (49)
T ss_dssp SCCS-SCCCCTTTCCCCSSHHHHHHHHHHHCTTTC
T ss_pred cccC-CceeCCcccccccchHHHHhhhhhcCcchh
Confidence 4433 6789999999999764 899999999876
No 138
>2a20_A Regulating synaptic membrane exocytosis protein 2; zinc-finger domain, metal binding protein; NMR {Rattus norvegicus} PDB: 2cjs_C
Probab=91.27 E-value=0.13 Score=32.55 Aligned_cols=54 Identities=22% Similarity=0.551 Sum_probs=40.6
Q ss_pred Cccccccccccc-cccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhh
Q 022481 8 FQEATRCDVCKC-SFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNS 66 (296)
Q Consensus 8 ~~~~~~C~~C~~-~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~ 66 (296)
..+...|.+|.| +|--- --|.|.+|-.-||++|.-+ +.+.. ++-..||.-|.+.
T Consensus 6 ~~d~~~C~iC~KTKFADG-~Gh~C~yCk~r~CaRCGg~-v~lr~---~k~~WvC~lC~k~ 60 (62)
T 2a20_A 6 KGDAPTCGICHKTKFADG-CGHNCSYCQTKFCARCGGR-VSLRS---NKVMWVCNLCRKQ 60 (62)
T ss_dssp SSCCCCCSSSSCSCCCSS-CCEEBTTTCCEECTTSEEE-EESST---TCEEEEEHHHHHH
T ss_pred cCCcchhhhhccceeccC-CCccccccCCeeecccCCE-eeecC---CeEEEEehhhhhc
Confidence 346789999998 56532 2589999999999999854 44433 5778999999764
No 139
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=90.88 E-value=0.13 Score=35.19 Aligned_cols=58 Identities=21% Similarity=0.472 Sum_probs=43.2
Q ss_pred cccccccccccccccccccccccce-----EcCCCCCCceecCCCCCCCceeccccchhhhcccC
Q 022481 12 TRCDVCKCSFNTFRRRHHCRCCGRT-----LCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRTG 71 (296)
Q Consensus 12 ~~C~~C~~~f~~~~r~hhCr~Cg~~-----~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~~ 71 (296)
..|..|+.....-.+.+||..|+.- ||.+|-..-..+..=| .....|..|.+.+++.+
T Consensus 3 ~~CP~C~~~l~~~~~~~~C~~C~~~~~~~afCPeCgq~Le~lkACG--A~~yFC~~C~~LiSkkr 65 (81)
T 2jrp_A 3 ITCPVCHHALERNGDTAHCETCAKDFSLQALCPDCRQPLQVLKACG--AVDYFCQNGHGLISKKR 65 (81)
T ss_dssp CCCSSSCSCCEECSSEEECTTTCCEEEEEEECSSSCSCCCEEEETT--EEEECCTTTTCCCCTTS
T ss_pred CCCCCCCCccccCCCceECccccccCCCcccCcchhhHHHHHHhcC--CcCeeeccCCCEeecce
Confidence 4688999988877788889999865 7889977655554444 23678888888876653
No 140
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=87.54 E-value=0.35 Score=32.48 Aligned_cols=53 Identities=15% Similarity=0.243 Sum_probs=36.0
Q ss_pred ccccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhccc
Q 022481 9 QEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRT 70 (296)
Q Consensus 9 ~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~ 70 (296)
.+...|.+|...|..-.. ..--.||++||..|...++. ..+.|-.|...+...
T Consensus 13 ~~~~~C~IC~~~~~~~~~-~~~~~C~H~fc~~Ci~~~~~--------~~~~CP~Cr~~~~~~ 65 (78)
T 2ect_A 13 GSGLECPVCKEDYALGES-VRQLPCNHLFHDSCIVPWLE--------QHDSCPVCRKSLTGQ 65 (78)
T ss_dssp SSSCCCTTTTSCCCTTSC-EEECTTSCEEETTTTHHHHT--------TTCSCTTTCCCCCCS
T ss_pred CCCCCCeeCCccccCCCC-EEEeCCCCeecHHHHHHHHH--------cCCcCcCcCCccCCc
Confidence 445789999998863221 11125999999999876542 125799998777654
No 141
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=86.43 E-value=0.34 Score=29.96 Aligned_cols=51 Identities=22% Similarity=0.368 Sum_probs=35.1
Q ss_pred ccccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhh
Q 022481 9 QEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSS 67 (296)
Q Consensus 9 ~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~ 67 (296)
.+...|.+|...|..-.+......||.+||..|...++.. ...|..|...+
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~--------~~~CP~Cr~~~ 53 (55)
T 2ecm_A 3 SGSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKE--------GYRCPLCSGPS 53 (55)
T ss_dssp SCCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHH--------TCCCTTSCCSS
T ss_pred CCCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHc--------CCcCCCCCCcC
Confidence 3457899999988654445566679999999998665432 15566665443
No 142
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=85.80 E-value=0.26 Score=31.62 Aligned_cols=28 Identities=21% Similarity=0.607 Sum_probs=21.2
Q ss_pred cccccccccccccc------------ccccccccccceEc
Q 022481 11 ATRCDVCKCSFNTF------------RRRHHCRCCGRTLC 38 (296)
Q Consensus 11 ~~~C~~C~~~f~~~------------~r~hhCr~Cg~~~C 38 (296)
.-.|..|++.|... .|.+.|..||+.|-
T Consensus 4 py~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~ 43 (60)
T 4gzn_C 4 PFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFR 43 (60)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEES
T ss_pred CccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcC
Confidence 45799999999732 26678888888884
No 143
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=85.57 E-value=0.45 Score=29.38 Aligned_cols=50 Identities=16% Similarity=0.345 Sum_probs=33.0
Q ss_pred ccccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhh
Q 022481 9 QEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNS 66 (296)
Q Consensus 9 ~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~ 66 (296)
++...|.+|...|..-..-..-..||.+||..|...+. +....|..|...
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~--------~~~~~CP~Cr~~ 52 (55)
T 1iym_A 3 DDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWL--------GSHSTCPLCRLT 52 (55)
T ss_dssp CCSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTT--------TTCCSCSSSCCC
T ss_pred CCCCcCccCCccccCCCceEECCCCCCcccHHHHHHHH--------HcCCcCcCCCCE
Confidence 35568999999887543333334699999999975542 123457777543
No 144
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.43 E-value=0.15 Score=33.82 Aligned_cols=52 Identities=17% Similarity=0.348 Sum_probs=36.1
Q ss_pred CccccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhccc
Q 022481 8 FQEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRT 70 (296)
Q Consensus 8 ~~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~ 70 (296)
..+...|.+|...|.- ...-..||++||..|...++.. .+.|-.|...+...
T Consensus 12 ~~~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~--------~~~CP~Cr~~~~~~ 63 (72)
T 2djb_A 12 LTPYILCSICKGYLID---ATTITECLHTFCKSCIVRHFYY--------SNRCPKCNIVVHQT 63 (72)
T ss_dssp CCGGGSCTTTSSCCSS---CEECSSSCCEECHHHHHHHHHH--------CSSCTTTCCCCCSS
T ss_pred cCCCCCCCCCChHHHC---cCEECCCCCHHHHHHHHHHHHc--------CCcCCCcCcccCcc
Confidence 3456789999887753 2333479999999998765422 35788888776544
No 145
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=85.42 E-value=0.68 Score=28.97 Aligned_cols=46 Identities=20% Similarity=0.281 Sum_probs=31.6
Q ss_pred CccccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhc
Q 022481 8 FQEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 68 (296)
Q Consensus 8 ~~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 68 (296)
..+...|.+|...|..- .--.||++||..|... ....|..|...+.
T Consensus 3 e~~~~~C~IC~~~~~~p----~~l~CgH~fC~~Ci~~-----------~~~~CP~Cr~~~~ 48 (56)
T 1bor_A 3 EFQFLRCQQCQAEAKCP----KLLPCLHTLCSGCLEA-----------SGMQCPICQAPWP 48 (56)
T ss_dssp SCCCSSCSSSCSSCBCC----SCSTTSCCSBTTTCSS-----------SSSSCSSCCSSSS
T ss_pred cccCCCceEeCCccCCe----EEcCCCCcccHHHHcc-----------CCCCCCcCCcEee
Confidence 34566799999888632 2235999999999765 2345777766554
No 146
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=84.68 E-value=0.12 Score=34.22 Aligned_cols=52 Identities=19% Similarity=0.340 Sum_probs=34.9
Q ss_pred ccccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhcc
Q 022481 9 QEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSR 69 (296)
Q Consensus 9 ~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~ 69 (296)
.+...|.+|...|.--. . -.||++||..|...+... ......|..|...+..
T Consensus 18 ~~~~~C~IC~~~~~~~~---~-~~CgH~fC~~Ci~~~~~~-----~~~~~~CP~Cr~~~~~ 69 (73)
T 2ysl_A 18 QEEVICPICLDILQKPV---T-IDCGHNFCLKCITQIGET-----SCGFFKCPLCKTSVRK 69 (73)
T ss_dssp CCCCBCTTTCSBCSSEE---E-CTTCCEEEHHHHHHHCSS-----SCSCCCCSSSCCCCCC
T ss_pred ccCCEeccCCcccCCeE---E-cCCCChhhHHHHHHHHHc-----CCCCCCCCCCCCcCCc
Confidence 34568999998876321 1 279999999998665431 1235678888776643
No 147
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=84.51 E-value=0.13 Score=34.34 Aligned_cols=53 Identities=15% Similarity=0.233 Sum_probs=35.5
Q ss_pred ccccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhccc
Q 022481 9 QEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRT 70 (296)
Q Consensus 9 ~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~ 70 (296)
.+...|.+|...|..-..-.. -.||++||..|...++.. .+.|-.|...+...
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~-~~C~H~f~~~Ci~~~~~~--------~~~CP~Cr~~~~~~ 65 (74)
T 2ep4_A 13 NLHELCAVCLEDFKPRDELGI-CPCKHAFHRKCLIKWLEV--------RKVCPLCNMPVLQL 65 (74)
T ss_dssp CCSCBCSSSCCBCCSSSCEEE-ETTTEEEEHHHHHHHHHH--------CSBCTTTCCBCSSC
T ss_pred CCCCCCcCCCcccCCCCcEEE-cCCCCEecHHHHHHHHHc--------CCcCCCcCcccccc
Confidence 345789999998864332221 159999999998765422 24788887766543
No 148
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=84.09 E-value=0.26 Score=33.13 Aligned_cols=56 Identities=21% Similarity=0.275 Sum_probs=36.8
Q ss_pred ccccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhcc
Q 022481 9 QEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSR 69 (296)
Q Consensus 9 ~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~ 69 (296)
.+...|.+|...|.--.. -.||++||..|...+....... ......|..|...+..
T Consensus 10 ~~~~~C~IC~~~~~~p~~----l~CgH~fC~~Ci~~~~~~~~~~-~~~~~~CP~Cr~~~~~ 65 (79)
T 2egp_A 10 QEEVTCPICLELLTEPLS----LDCGHSLCRACITVSNKEAVTS-MGGKSSCPVCGISYSF 65 (79)
T ss_dssp CCCCEETTTTEECSSCCC----CSSSCCCCHHHHSCCCCCCSSS-CCCCCCCSSSCCCCCS
T ss_pred ccCCCCcCCCcccCCeeE----CCCCCHHHHHHHHHHHHhcccC-CCCCCcCCCCCCcCCH
Confidence 345689999998863221 2699999999987764432111 1335678888776653
No 149
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=83.83 E-value=0.44 Score=33.50 Aligned_cols=58 Identities=21% Similarity=0.442 Sum_probs=41.0
Q ss_pred cccccccccccccccccccccccce-----EcCCCCCCceecCCCCCCCceeccccchhhhcccC
Q 022481 12 TRCDVCKCSFNTFRRRHHCRCCGRT-----LCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRTG 71 (296)
Q Consensus 12 ~~C~~C~~~f~~~~r~hhCr~Cg~~-----~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~~ 71 (296)
..|..|+.....-.+.+||..|+.- +|.+|-..-..|..=| ----.|..|.+.+++.+
T Consensus 33 ~~CP~Cq~eL~~~g~~~hC~~C~~~f~~~a~CPdC~q~LevLkACG--AvdYFC~~chgLiSKkR 95 (101)
T 2jne_A 33 LHCPQCQHVLDQDNGHARCRSCGEFIEMKALCPDCHQPLQVLKACG--AVDYFCQHGHGLISKKR 95 (101)
T ss_dssp CBCSSSCSBEEEETTEEEETTTCCEEEEEEECTTTCSBCEEEEETT--EEEEEETTTTEEECTTT
T ss_pred ccCccCCCcceecCCEEECccccchhhccccCcchhhHHHHHHHhc--CcchhhccCCceeecce
Confidence 5899999998877788889999875 6888876544443322 13456788888776553
No 150
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=83.80 E-value=0.39 Score=33.18 Aligned_cols=28 Identities=32% Similarity=0.656 Sum_probs=18.2
Q ss_pred cccccccccccccccc------------cccccccccceE
Q 022481 10 EATRCDVCKCSFNTFR------------RRHHCRCCGRTL 37 (296)
Q Consensus 10 ~~~~C~~C~~~f~~~~------------r~hhCr~Cg~~~ 37 (296)
+.-.|..|++.|.... |.+.|..||+.|
T Consensus 27 ~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F 66 (85)
T 2lv2_A 27 ECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATF 66 (85)
T ss_dssp TTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEE
T ss_pred CCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEe
Confidence 3457888888887321 445677777666
No 151
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=83.76 E-value=0.21 Score=32.78 Aligned_cols=50 Identities=14% Similarity=0.322 Sum_probs=36.4
Q ss_pred ccccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhcccC
Q 022481 9 QEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRTG 71 (296)
Q Consensus 9 ~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~~ 71 (296)
.+...|.+|...|.. .--.||++||..|...+.. ....|..|...+....
T Consensus 13 ~~~~~C~IC~~~~~~-----~~~~CgH~fc~~Ci~~~~~--------~~~~CP~Cr~~~~~~~ 62 (70)
T 2ecn_A 13 TDEEECCICMDGRAD-----LILPCAHSFCQKCIDKWSD--------RHRNCPICRLQMTGAN 62 (70)
T ss_dssp CCCCCCSSSCCSCCS-----EEETTTEEECHHHHHHSSC--------CCSSCHHHHHCTTCCC
T ss_pred CCCCCCeeCCcCccC-----cccCCCCcccHHHHHHHHH--------CcCcCCCcCCcccCCC
Confidence 456789999988765 3356999999999765422 3567999988776543
No 152
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=81.54 E-value=0.44 Score=31.71 Aligned_cols=50 Identities=20% Similarity=0.565 Sum_probs=33.1
Q ss_pred ccccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhh
Q 022481 9 QEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSS 67 (296)
Q Consensus 9 ~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~ 67 (296)
.+...|.+|...|.- -..-..||++||..|...+... ...+.|-.|...+
T Consensus 13 ~~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~------~~~~~CP~Cr~~~ 62 (74)
T 2yur_A 13 PDELLCLICKDIMTD---AVVIPCCGNSYCDECIRTALLE------SDEHTCPTCHQND 62 (74)
T ss_dssp CGGGSCSSSCCCCTT---CEECSSSCCEECTTHHHHHHHH------SSSSCCSSSCCSS
T ss_pred CCCCCCcCCChHHhC---CeEcCCCCCHHHHHHHHHHHHh------cCCCcCCCCCCcC
Confidence 345689999877753 2333449999999998665432 1235788887643
No 153
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=81.24 E-value=0.11 Score=37.25 Aligned_cols=48 Identities=19% Similarity=0.441 Sum_probs=34.5
Q ss_pred ccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhc
Q 022481 11 ATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 68 (296)
Q Consensus 11 ~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 68 (296)
.-.|.+|...|. .-..|-.||++||..|...++... ...|..|...+.
T Consensus 22 ~~~C~IC~~~~~---~p~~~~~CgH~FC~~Ci~~~~~~~-------~~~CP~Cr~~~~ 69 (100)
T 3lrq_A 22 VFRCFICMEKLR---DARLCPHCSKLCCFSCIRRWLTEQ-------RAQCPHCRAPLQ 69 (100)
T ss_dssp HTBCTTTCSBCS---SEEECTTTCCEEEHHHHHHHHHHT-------CSBCTTTCCBCC
T ss_pred CCCCccCCcccc---CccccCCCCChhhHHHHHHHHHHC-------cCCCCCCCCcCC
Confidence 457999988775 345567899999999987654321 157888877664
No 154
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=80.91 E-value=0.93 Score=31.33 Aligned_cols=34 Identities=21% Similarity=0.459 Sum_probs=25.2
Q ss_pred cccccccccccccc--cccccccccccceEcCCCCC
Q 022481 10 EATRCDVCKCSFNT--FRRRHHCRCCGRTLCHEHSS 43 (296)
Q Consensus 10 ~~~~C~~C~~~f~~--~~r~hhCr~Cg~~~C~~c~~ 43 (296)
....|..|+..|.. ..++..|..||..||..|-.
T Consensus 24 ~~~wCP~C~~~~~~~~~~~~v~C~~C~~~FC~~C~~ 59 (86)
T 2ct7_A 24 KFLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKR 59 (86)
T ss_dssp CEECCSSSCCCEECCCSCSCEECTTTCCEECSSSCS
T ss_pred CEeECcCCCchheecCCCCceEeCCCCCccccccCC
Confidence 34458878876642 24568899999999999975
No 155
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=80.50 E-value=0.53 Score=31.27 Aligned_cols=26 Identities=27% Similarity=0.655 Sum_probs=17.7
Q ss_pred cccccccccccccc-cccccccccc-eE
Q 022481 12 TRCDVCKCSFNTFR-RRHHCRCCGR-TL 37 (296)
Q Consensus 12 ~~C~~C~~~f~~~~-r~hhCr~Cg~-~~ 37 (296)
-.|..|+..|.+.. -..+|+.||. |+
T Consensus 29 Y~C~~CG~~~e~~~~d~irCp~CG~RIL 56 (70)
T 1twf_L 29 YICAECSSKLSLSRTDAVRCKDCGHRIL 56 (70)
T ss_dssp EECSSSCCEECCCTTSTTCCSSSCCCCC
T ss_pred EECCCCCCcceeCCCCCccCCCCCceEe
Confidence 36888888887653 3467777776 44
No 156
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=80.47 E-value=0.13 Score=34.05 Aligned_cols=50 Identities=14% Similarity=0.216 Sum_probs=33.4
Q ss_pred ccccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhccc
Q 022481 9 QEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRT 70 (296)
Q Consensus 9 ~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~ 70 (296)
.+...|.+|...|..- . --.||++||..|...++. ..+.|-.|...+...
T Consensus 13 ~~~~~C~IC~~~~~~~---~-~~~CgH~fC~~Ci~~~~~--------~~~~CP~Cr~~~~~~ 62 (71)
T 2d8t_A 13 LTVPECAICLQTCVHP---V-SLPCKHVFCYLCVKGASW--------LGKRCALCRQEIPED 62 (71)
T ss_dssp SSCCBCSSSSSBCSSE---E-EETTTEEEEHHHHHHCTT--------CSSBCSSSCCBCCHH
T ss_pred CCCCCCccCCcccCCC---E-EccCCCHHHHHHHHHHHH--------CCCcCcCcCchhCHh
Confidence 4456899998877532 1 126999999999754321 126788887776543
No 157
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=79.76 E-value=0.9 Score=29.65 Aligned_cols=29 Identities=28% Similarity=0.758 Sum_probs=19.2
Q ss_pred cccccccccccccccc------------ccccccccccceE
Q 022481 9 QEATRCDVCKCSFNTF------------RRRHHCRCCGRTL 37 (296)
Q Consensus 9 ~~~~~C~~C~~~f~~~------------~r~hhCr~Cg~~~ 37 (296)
...-.|..|++.|... .+.+.|..||+.|
T Consensus 15 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f 55 (74)
T 2lce_A 15 DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQF 55 (74)
T ss_dssp CCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEE
T ss_pred CCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchh
Confidence 3456899999999732 1345566666666
No 158
>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=79.46 E-value=0.93 Score=29.38 Aligned_cols=28 Identities=21% Similarity=0.778 Sum_probs=21.5
Q ss_pred ccccccc--ccccccccccccccccccceEcCC
Q 022481 10 EATRCDV--CKCSFNTFRRRHHCRCCGRTLCHE 40 (296)
Q Consensus 10 ~~~~C~~--C~~~f~~~~r~hhCr~Cg~~~C~~ 40 (296)
....|.. |.+. .++ ..+|+.||..||..
T Consensus 11 ~~~~Cs~~~Ck~~-~ll--~f~C~~C~~~FC~~ 40 (63)
T 1x4v_A 11 FTNKCERAGCRQR-EMM--KLTCERCSRNFCIK 40 (63)
T ss_dssp TCCCCCSTTCCCC-CSS--CCBCSSSCCBCCHH
T ss_pred cCCCCCccCCCCC-Ccc--ceECCCCCcccCcc
Confidence 4578887 9886 333 56999999999863
No 159
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=79.36 E-value=0.15 Score=33.24 Aligned_cols=50 Identities=16% Similarity=0.545 Sum_probs=33.7
Q ss_pred ccccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhcc
Q 022481 9 QEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSR 69 (296)
Q Consensus 9 ~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~ 69 (296)
.+...|.+|...|.--.. -.||++||..|...++. .....|..|...+..
T Consensus 13 ~~~~~C~IC~~~~~~p~~----~~CgH~fC~~Ci~~~~~-------~~~~~CP~Cr~~~~~ 62 (66)
T 2ecy_A 13 EDKYKCEKCHLVLCSPKQ----TECGHRFCESCMAALLS-------SSSPKCTACQESIVK 62 (66)
T ss_dssp CCCEECTTTCCEESSCCC----CSSSCCCCHHHHHHHHT-------TSSCCCTTTCCCCCT
T ss_pred CcCCCCCCCChHhcCeeE----CCCCCHHHHHHHHHHHH-------hCcCCCCCCCcCCCh
Confidence 345689999888763222 37999999999866542 234568778766543
No 160
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=79.33 E-value=0.11 Score=33.96 Aligned_cols=53 Identities=17% Similarity=0.464 Sum_probs=35.8
Q ss_pred Ccccccccccccccccc---ccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhc
Q 022481 8 FQEATRCDVCKCSFNTF---RRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 68 (296)
Q Consensus 8 ~~~~~~C~~C~~~f~~~---~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 68 (296)
..+...|.+|...|..- .+...-..||++||..|...++.. ...|-.|...+.
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~--------~~~CP~Cr~~~~ 67 (69)
T 2ea6_A 12 PSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN--------ANTCPTCRKKIN 67 (69)
T ss_dssp TTCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHH--------CSSCTTTCCCCC
T ss_pred CCCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHc--------CCCCCCCCCccC
Confidence 34567899999988743 233355689999999998665421 346777765553
No 161
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=78.16 E-value=0.77 Score=28.04 Aligned_cols=27 Identities=19% Similarity=0.528 Sum_probs=17.7
Q ss_pred cccccccccccccc------------ccccccccccceE
Q 022481 11 ATRCDVCKCSFNTF------------RRRHHCRCCGRTL 37 (296)
Q Consensus 11 ~~~C~~C~~~f~~~------------~r~hhCr~Cg~~~ 37 (296)
.-.|..|++.|... .+.+.|..||+.|
T Consensus 4 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f 42 (57)
T 3uk3_C 4 SRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAA 42 (57)
T ss_dssp -CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEE
T ss_pred CccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchh
Confidence 34799999999732 1345677776665
No 162
>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=78.10 E-value=1.1 Score=30.06 Aligned_cols=29 Identities=28% Similarity=0.781 Sum_probs=22.3
Q ss_pred cccccc--ccccccccccccccccccceEcCCCC
Q 022481 11 ATRCDV--CKCSFNTFRRRHHCRCCGRTLCHEHS 42 (296)
Q Consensus 11 ~~~C~~--C~~~f~~~~r~hhCr~Cg~~~C~~c~ 42 (296)
...|.. |++. .++ -..|+.||.+||..+-
T Consensus 14 g~~Cs~~~C~~~-dfl--pf~C~~C~~~FC~~HR 44 (75)
T 1wys_A 14 GQHCQVQHCRQR-DFL--PFVCDGCSGIFCLEHR 44 (75)
T ss_dssp CCCCSCTTTCCC-SCC--CEECTTTCCEECSTTC
T ss_pred CCCcCcccCCCc-cce--eeECcccCcCcCcccC
Confidence 468887 9886 333 6799999999998653
No 163
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.73 E-value=1 Score=30.75 Aligned_cols=56 Identities=23% Similarity=0.444 Sum_probs=38.0
Q ss_pred ccccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhcc
Q 022481 9 QEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSR 69 (296)
Q Consensus 9 ~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~ 69 (296)
.+...|.+|...|....+.-.--.||++||..|...++... .....|-.|...+..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~-----~~~~~CP~Cr~~~~~ 68 (88)
T 2ct2_A 13 REVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASS-----INGVRCPFCSKITRI 68 (88)
T ss_dssp CSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHC-----SSCBCCTTTCCCBCC
T ss_pred cCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcC-----CCCcCCCCCCCcccc
Confidence 44578999999887644333334799999999987654321 134678888776543
No 164
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=75.61 E-value=0.63 Score=29.53 Aligned_cols=12 Identities=33% Similarity=1.013 Sum_probs=8.9
Q ss_pred cccccccccccc
Q 022481 11 ATRCDVCKCSFN 22 (296)
Q Consensus 11 ~~~C~~C~~~f~ 22 (296)
.-.|..|++.|.
T Consensus 14 ~~~C~~C~k~F~ 25 (62)
T 1vd4_A 14 SFKCPVCSSTFT 25 (62)
T ss_dssp EEECSSSCCEEE
T ss_pred CccCCCCCchhc
Confidence 356888888876
No 165
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=75.55 E-value=1 Score=27.48 Aligned_cols=10 Identities=20% Similarity=0.670 Sum_probs=8.6
Q ss_pred cccccccccc
Q 022481 13 RCDVCKCSFN 22 (296)
Q Consensus 13 ~C~~C~~~f~ 22 (296)
.|..|++.|.
T Consensus 3 ~C~~C~~~f~ 12 (57)
T 1bbo_A 3 ICEECGIRXK 12 (57)
T ss_dssp BCTTTCCBCS
T ss_pred cCCCCcCcCC
Confidence 5889999987
No 166
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=75.12 E-value=0.82 Score=29.13 Aligned_cols=34 Identities=21% Similarity=0.385 Sum_probs=24.5
Q ss_pred ccccccccccccccccccccccccccceEcCCCCCCce
Q 022481 9 QEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQM 46 (296)
Q Consensus 9 ~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~ 46 (296)
.+...|.+|...|.--. . -.||++||..|...+.
T Consensus 18 ~~~~~C~IC~~~~~~p~---~-~~CgH~fC~~Ci~~~~ 51 (63)
T 2ysj_A 18 QEEVICPICLDILQKPV---T-IDCGHNFCLKCITQIG 51 (63)
T ss_dssp CCCCBCTTTCSBCSSCE---E-CTTSSEECHHHHHHHH
T ss_pred ccCCCCCcCCchhCCeE---E-eCCCCcchHHHHHHHH
Confidence 44568999988776321 1 2799999999986654
No 167
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=74.86 E-value=1.1 Score=27.55 Aligned_cols=27 Identities=30% Similarity=0.535 Sum_probs=17.2
Q ss_pred cccccccccc-cc-ccccccccccccceE
Q 022481 11 ATRCDVCKCS-FN-TFRRRHHCRCCGRTL 37 (296)
Q Consensus 11 ~~~C~~C~~~-f~-~~~r~hhCr~Cg~~~ 37 (296)
...|..|+.. |- .-..|++|..||.++
T Consensus 19 ~k~CP~CG~~~fm~~~~~R~~C~kCG~t~ 47 (50)
T 3j20_Y 19 NKFCPRCGPGVFMADHGDRWACGKCGYTE 47 (50)
T ss_dssp SEECSSSCSSCEEEECSSEEECSSSCCEE
T ss_pred cccCCCCCCceEEecCCCeEECCCCCCEE
Confidence 4678888763 32 223577888888764
No 168
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=74.07 E-value=1.1 Score=27.71 Aligned_cols=11 Identities=36% Similarity=0.927 Sum_probs=9.0
Q ss_pred ccccccccccc
Q 022481 12 TRCDVCKCSFN 22 (296)
Q Consensus 12 ~~C~~C~~~f~ 22 (296)
-.|..|++.|.
T Consensus 3 ~~C~~C~~~f~ 13 (60)
T 2adr_A 3 FVCEVCTRAFA 13 (60)
T ss_dssp BCCTTTCCCBS
T ss_pred CcCCCCccccC
Confidence 36889999987
No 169
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=73.30 E-value=0.48 Score=34.50 Aligned_cols=51 Identities=18% Similarity=0.308 Sum_probs=34.5
Q ss_pred CccccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhcc
Q 022481 8 FQEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSR 69 (296)
Q Consensus 8 ~~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~ 69 (296)
..+.-.|.+|...|.--. --.||++||..|...+.. .....|-.|...+..
T Consensus 12 ~~~~~~C~iC~~~~~~p~----~~~CgH~fC~~Ci~~~~~-------~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 12 SLSECQCGICMEILVEPV----TLPCNHTLCKPCFQSTVE-------KASLCCPFCRRRVSS 62 (115)
T ss_dssp CHHHHBCTTTCSBCSSCE----ECTTSCEECHHHHCCCCC-------TTTSBCTTTCCBCHH
T ss_pred CCCCCCCccCCcccCcee----EcCCCCHHhHHHHHHHHh-------HCcCCCCCCCcccCc
Confidence 344567999998776321 127999999999876542 123678888776653
No 170
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=73.14 E-value=0.49 Score=30.86 Aligned_cols=53 Identities=9% Similarity=0.192 Sum_probs=34.9
Q ss_pred ccccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhccc
Q 022481 9 QEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRT 70 (296)
Q Consensus 9 ~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~ 70 (296)
.+...|.+|...|..-. ....-.||++||..|...++.. ...|-.|...+...
T Consensus 12 ~~~~~C~IC~~~~~~~~-~~~~~~C~H~fc~~Ci~~~~~~--------~~~CP~Cr~~~~~~ 64 (69)
T 2kiz_A 12 DTEEKCTICLSILEEGE-DVRRLPCMHLFHQVCVDQWLIT--------NKKCPICRVDIEAQ 64 (69)
T ss_dssp TCCCSBTTTTBCCCSSS-CEEECTTSCEEEHHHHHHHHHH--------CSBCTTTCSBSCSC
T ss_pred CCCCCCeeCCccccCCC-cEEEeCCCCHHHHHHHHHHHHc--------CCCCcCcCccccCc
Confidence 34568999998885321 2333469999999998665432 23588887766543
No 171
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=72.80 E-value=1.9 Score=28.97 Aligned_cols=55 Identities=16% Similarity=0.349 Sum_probs=35.5
Q ss_pred ccccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhcc
Q 022481 9 QEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSR 69 (296)
Q Consensus 9 ~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~ 69 (296)
.+...|.+|...|.--.. -.||++||..|...+...... ......|..|...+..
T Consensus 17 ~~~~~C~IC~~~~~~p~~----~~CgH~fC~~Ci~~~~~~~~~--~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecv_A 17 KEEVTCPICLELLTQPLS----LDCGHSFCQACLTANHKKSML--DKGESSCPVCRISYQP 71 (85)
T ss_dssp CCCCCCTTTCSCCSSCBC----CSSSCCBCTTHHHHHHHHHHH--TTSCCCCTTTCCSSCS
T ss_pred cCCCCCCCCCcccCCcee----CCCCCHHHHHHHHHHHHHhhc--CCCCCcCCCCCCccCH
Confidence 455789999988763221 269999999998654322110 1225678888877654
No 172
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=72.63 E-value=1.1 Score=28.75 Aligned_cols=13 Identities=23% Similarity=0.687 Sum_probs=10.0
Q ss_pred ccccccccccccc
Q 022481 10 EATRCDVCKCSFN 22 (296)
Q Consensus 10 ~~~~C~~C~~~f~ 22 (296)
..-.|..|++.|.
T Consensus 8 ~~~~C~~C~k~f~ 20 (70)
T 1x5w_A 8 HPEKCSECSYSCS 20 (70)
T ss_dssp CSEECSSSSCEES
T ss_pred CCeECCCCCcccC
Confidence 3457888999887
No 173
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=72.16 E-value=1 Score=32.94 Aligned_cols=45 Identities=20% Similarity=0.467 Sum_probs=30.8
Q ss_pred ccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhc
Q 022481 11 ATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 68 (296)
Q Consensus 11 ~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 68 (296)
.-.|.+|...|.- -..-..||++||..|...+.. ..|..|...+.
T Consensus 22 ~~~C~IC~~~~~~---pv~~~~CgH~fC~~Ci~~~~~----------~~CP~Cr~~~~ 66 (117)
T 1jm7_B 22 LLRCSRCTNILRE---PVCLGGCEHIFCSNCVSDCIG----------TGCPVCYTPAW 66 (117)
T ss_dssp TTSCSSSCSCCSS---CBCCCSSSCCBCTTTGGGGTT----------TBCSSSCCBCS
T ss_pred CCCCCCCChHhhC---ccEeCCCCCHHHHHHHHHHhc----------CCCcCCCCcCc
Confidence 3579999887742 222227999999999866532 56888876653
No 174
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=72.02 E-value=1.2 Score=28.88 Aligned_cols=13 Identities=23% Similarity=0.562 Sum_probs=9.9
Q ss_pred ccccccccccccc
Q 022481 10 EATRCDVCKCSFN 22 (296)
Q Consensus 10 ~~~~C~~C~~~f~ 22 (296)
..-.|..|++.|.
T Consensus 13 k~~~C~~C~k~f~ 25 (72)
T 1x6e_A 13 KPYGCVECGKAFS 25 (72)
T ss_dssp CCEECSSSCCEES
T ss_pred CCccCCCCCCccC
Confidence 3457888988886
No 175
>1wfe_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=71.29 E-value=1.5 Score=30.34 Aligned_cols=29 Identities=21% Similarity=0.651 Sum_probs=21.6
Q ss_pred ccccccc--ccccccccccccccccccceEcCCC
Q 022481 10 EATRCDV--CKCSFNTFRRRHHCRCCGRTLCHEH 41 (296)
Q Consensus 10 ~~~~C~~--C~~~f~~~~r~hhCr~Cg~~~C~~c 41 (296)
....|.. |.+. .++ -.+|+.||..||..+
T Consensus 24 ~~~~C~~~~Ck~~-~~l--~f~C~~C~~~FC~~H 54 (86)
T 1wfe_A 24 KSYSCSFKGCTDV-ELV--AVICPYCEKNFCLRH 54 (86)
T ss_dssp CCEECCSTTCCCE-ESS--CEECTTTCCEECGGG
T ss_pred CCCCCCCcCCCCC-Ccc--ceECCCCCccccccc
Confidence 3467887 9886 222 569999999998754
No 176
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=70.44 E-value=0.68 Score=33.58 Aligned_cols=57 Identities=9% Similarity=0.117 Sum_probs=37.4
Q ss_pred ccccccccccccccc--------------cccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhccc
Q 022481 11 ATRCDVCKCSFNTFR--------------RRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRT 70 (296)
Q Consensus 11 ~~~C~~C~~~f~~~~--------------r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~ 70 (296)
...|.+|...|..-. ....--.||++||..|...++.... ......|-.|...+...
T Consensus 25 ~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~---~~~~~~CP~CR~~~~~~ 95 (114)
T 1v87_A 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGN---KDGSLQCPSCKTIYGEK 95 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTC---CSSCCBCTTTCCBSSSC
T ss_pred CCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHccc---CCCCCcCCCCCCccCCC
Confidence 358999999885321 1112456999999999877653211 13456899998776543
No 177
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=70.41 E-value=0.32 Score=36.06 Aligned_cols=47 Identities=17% Similarity=0.383 Sum_probs=32.8
Q ss_pred cccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhcc
Q 022481 12 TRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSR 69 (296)
Q Consensus 12 ~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~ 69 (296)
-.|.+|...|.--. --.||++||..|...+.. .....|..|...+..
T Consensus 53 ~~C~IC~~~~~~p~----~~~CgH~fC~~Ci~~~~~-------~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 53 FQCICCQELVFRPI----TTVCQHNVCKDCLDRSFR-------AQVFSCPACRYDLGR 99 (124)
T ss_dssp TBCTTTSSBCSSEE----ECTTSCEEEHHHHHHHHH-------TTCCBCTTTCCBCCT
T ss_pred CCCCcCChHHcCcE----EeeCCCcccHHHHHHHHh-------HCcCCCCCCCccCCC
Confidence 46999998876221 127999999999865543 234578888877654
No 178
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=69.93 E-value=1.9 Score=28.48 Aligned_cols=51 Identities=24% Similarity=0.456 Sum_probs=34.7
Q ss_pred ccccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhc
Q 022481 9 QEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 68 (296)
Q Consensus 9 ~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 68 (296)
.+...|.+|...|..-. ....-.||++||..|...++.. ...|-.|...+.
T Consensus 21 ~~~~~C~IC~~~~~~~~-~~~~l~C~H~fh~~Ci~~w~~~--------~~~CP~Cr~~~~ 71 (75)
T 1x4j_A 21 SEQTLCVVCMCDFESRQ-LLRVLPCNHEFHAKCVDKWLKA--------NRTCPICRADSG 71 (75)
T ss_dssp SSCCEETTTTEECCBTC-EEEEETTTEEEETTHHHHHHHH--------CSSCTTTCCCCC
T ss_pred CCCCCCeECCcccCCCC-eEEEECCCCHhHHHHHHHHHHc--------CCcCcCcCCcCC
Confidence 34578999999886432 2334469999999998765422 246888866553
No 179
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=68.86 E-value=3 Score=27.21 Aligned_cols=13 Identities=38% Similarity=0.836 Sum_probs=10.8
Q ss_pred ccccccccccccc
Q 022481 10 EATRCDVCKCSFN 22 (296)
Q Consensus 10 ~~~~C~~C~~~f~ 22 (296)
..-.|..|++.|.
T Consensus 17 ~~~~C~~C~~~f~ 29 (77)
T 2cot_A 17 RRYKCDECGKSFS 29 (77)
T ss_dssp CSSBCSSSCCBCS
T ss_pred CCEECCCCCcccC
Confidence 4568999999997
No 180
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=67.88 E-value=1.7 Score=29.82 Aligned_cols=30 Identities=13% Similarity=0.254 Sum_probs=20.2
Q ss_pred cccccccccc--ccccccccccccccceEcCC
Q 022481 11 ATRCDVCKCS--FNTFRRRHHCRCCGRTLCHE 40 (296)
Q Consensus 11 ~~~C~~C~~~--f~~~~r~hhCr~Cg~~~C~~ 40 (296)
...|..|++. |..-....+|+.||..|-..
T Consensus 27 ~y~Cp~CG~~~v~r~atGiW~C~~Cg~~~agg 58 (83)
T 1vq8_Z 27 DHACPNCGEDRVDRQGTGIWQCSYCDYKFTGG 58 (83)
T ss_dssp CEECSSSCCEEEEEEETTEEEETTTCCEEECC
T ss_pred cCcCCCCCCcceeccCCCeEECCCCCCEecCC
Confidence 3468888873 33445678888888887654
No 181
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=67.86 E-value=1.6 Score=26.45 Aligned_cols=13 Identities=23% Similarity=0.629 Sum_probs=9.9
Q ss_pred ccccccccccccc
Q 022481 10 EATRCDVCKCSFN 22 (296)
Q Consensus 10 ~~~~C~~C~~~f~ 22 (296)
..-.|..|++.|.
T Consensus 11 k~~~C~~C~k~f~ 23 (54)
T 2eps_A 11 KPYICQSCGKGFS 23 (54)
T ss_dssp CCEECSSSCCEES
T ss_pred CCeECCCCCcccC
Confidence 4457888988886
No 182
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=67.84 E-value=1.7 Score=31.68 Aligned_cols=29 Identities=14% Similarity=0.332 Sum_probs=18.2
Q ss_pred cccccccc-ccc-ccccccccccccceEcCC
Q 022481 12 TRCDVCKC-SFN-TFRRRHHCRCCGRTLCHE 40 (296)
Q Consensus 12 ~~C~~C~~-~f~-~~~r~hhCr~Cg~~~C~~ 40 (296)
..|..|++ .|. .-...++|+.||.+|-..
T Consensus 61 ytCPfCGk~~vKR~avGIW~C~~Cgk~fAGG 91 (116)
T 3cc2_Z 61 HACPNCGEDRVDRQGTGIWQCSYCDYKFTGG 91 (116)
T ss_dssp EECSSSCCEEEEEEETTEEEETTTCCEEECC
T ss_pred CcCCCCCCceeEecCceeEECCCCCCEEECC
Confidence 46888877 222 223467888888887543
No 183
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=67.33 E-value=1.9 Score=30.83 Aligned_cols=12 Identities=33% Similarity=0.902 Sum_probs=7.1
Q ss_pred cccccccccceE
Q 022481 26 RRHHCRCCGRTL 37 (296)
Q Consensus 26 r~hhCr~Cg~~~ 37 (296)
...-|+.||..|
T Consensus 66 ~p~~C~~CG~~F 77 (105)
T 2gmg_A 66 KPAQCRKCGFVF 77 (105)
T ss_dssp CCCBBTTTCCBC
T ss_pred ECcChhhCcCee
Confidence 345566666666
No 184
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=66.98 E-value=1.1 Score=29.23 Aligned_cols=54 Identities=19% Similarity=0.501 Sum_probs=37.2
Q ss_pred Ccccccccccccccccc---ccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhcc
Q 022481 8 FQEATRCDVCKCSFNTF---RRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSR 69 (296)
Q Consensus 8 ~~~~~~C~~C~~~f~~~---~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~ 69 (296)
..+...|.+|...|..- .+...-..||++||..|...+.. ....|-.|...+..
T Consensus 7 ~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~--------~~~~CP~Cr~~~~~ 63 (71)
T 3ng2_A 7 PSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK--------NANTCPTCRKKINH 63 (71)
T ss_dssp CTTCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHH--------HCSBCTTTCCBCCC
T ss_pred CCCCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHH--------cCCCCCCCCCccCh
Confidence 34567899999988643 23335668999999999876542 12478888776653
No 185
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=66.18 E-value=0.6 Score=33.64 Aligned_cols=50 Identities=14% Similarity=0.307 Sum_probs=32.8
Q ss_pred ccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhcc
Q 022481 11 ATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSR 69 (296)
Q Consensus 11 ~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~ 69 (296)
...|.+|...|.--.. -.||++||..|...+.... .....|..|...+..
T Consensus 21 ~~~C~IC~~~~~~p~~----~~CgH~fC~~Ci~~~~~~~-----~~~~~CP~Cr~~~~~ 70 (112)
T 1jm7_A 21 ILECPICLELIKEPVS----TKCDHIFCKFCMLKLLNQK-----KGPSQCPLCKNDITK 70 (112)
T ss_dssp HTSCSSSCCCCSSCCB----CTTSCCCCSHHHHHHHHSS-----SSSCCCTTTSCCCCT
T ss_pred CCCCcccChhhcCeEE----CCCCCHHHHHHHHHHHHhC-----CCCCCCcCCCCcCCH
Confidence 3579999887753211 3699999999976554321 123578888776654
No 186
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=66.02 E-value=2.7 Score=26.99 Aligned_cols=48 Identities=17% Similarity=0.292 Sum_probs=33.2
Q ss_pred cccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhc
Q 022481 10 EATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 68 (296)
Q Consensus 10 ~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 68 (296)
+...|.+|...|.- ....-.||++||..|...+.. ....|..|...+.
T Consensus 4 ~~~~C~IC~~~~~~---~~~~~~C~H~fc~~Ci~~~~~--------~~~~CP~Cr~~~~ 51 (68)
T 1chc_A 4 VAERCPICLEDPSN---YSMALPCLHAFCYVCITRWIR--------QNPTCPLCKVPVE 51 (68)
T ss_dssp CCCCCSSCCSCCCS---CEEETTTTEEESTTHHHHHHH--------HSCSTTTTCCCCC
T ss_pred CCCCCeeCCccccC---CcEecCCCCeeHHHHHHHHHh--------CcCcCcCCChhhH
Confidence 45689999888753 123456999999999866532 1247888876654
No 187
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.36 E-value=0.98 Score=31.53 Aligned_cols=12 Identities=17% Similarity=0.523 Sum_probs=8.9
Q ss_pred cccccccccccc
Q 022481 11 ATRCDVCKCSFN 22 (296)
Q Consensus 11 ~~~C~~C~~~f~ 22 (296)
.-.|..|++.|.
T Consensus 24 ~~~C~~C~k~f~ 35 (98)
T 2gqj_A 24 EAVCPTCNVVTR 35 (98)
T ss_dssp CCCCTTTCCCCS
T ss_pred CcCCCCCCCChh
Confidence 356888888886
No 188
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=64.97 E-value=2.8 Score=25.15 Aligned_cols=25 Identities=28% Similarity=0.636 Sum_probs=17.3
Q ss_pred cccccccccccccc----cccccccccce
Q 022481 12 TRCDVCKCSFNTFR----RRHHCRCCGRT 36 (296)
Q Consensus 12 ~~C~~C~~~f~~~~----r~hhCr~Cg~~ 36 (296)
-.|..|++.|+... =-.+|..||.-
T Consensus 4 Y~C~rCg~~fs~~el~~lP~IrCpyCGyr 32 (48)
T 4ayb_P 4 YRCGKCWKTFTDEQLKVLPGVRCPYCGYK 32 (48)
T ss_dssp -CCCCTTTTCCCCCSCCCSSSCCTTTCCS
T ss_pred EEeeccCCCccHHHHhhCCCcccCccCcE
Confidence 36899999998432 24678888864
No 189
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=64.64 E-value=2.1 Score=25.04 Aligned_cols=13 Identities=23% Similarity=0.790 Sum_probs=9.6
Q ss_pred ccccccccccccc
Q 022481 10 EATRCDVCKCSFN 22 (296)
Q Consensus 10 ~~~~C~~C~~~f~ 22 (296)
..-.|..|++.|.
T Consensus 11 k~~~C~~C~k~f~ 23 (48)
T 2epr_A 11 KQVACEICGKIFR 23 (48)
T ss_dssp CSEEETTTTEEES
T ss_pred cCeeCCCCCcccC
Confidence 3457888888886
No 190
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.37 E-value=2.5 Score=27.68 Aligned_cols=13 Identities=15% Similarity=0.738 Sum_probs=10.1
Q ss_pred ccccccccccccc
Q 022481 10 EATRCDVCKCSFN 22 (296)
Q Consensus 10 ~~~~C~~C~~~f~ 22 (296)
..-.|..|++.|.
T Consensus 6 k~~~C~~C~k~f~ 18 (78)
T 2d9h_A 6 SGLQCEICGFTCR 18 (78)
T ss_dssp CCEECSSSCCEES
T ss_pred cCeECCCCCCeeC
Confidence 3457899999986
No 191
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=64.36 E-value=2.1 Score=27.98 Aligned_cols=13 Identities=23% Similarity=0.812 Sum_probs=9.7
Q ss_pred ccccccccccccc
Q 022481 10 EATRCDVCKCSFN 22 (296)
Q Consensus 10 ~~~~C~~C~~~f~ 22 (296)
..-.|..|++.|.
T Consensus 14 k~~~C~~C~k~f~ 26 (77)
T 2ct1_A 14 KPYECYICHARFT 26 (77)
T ss_dssp CSEECTTTCCEES
T ss_pred CCeECCCcCchhC
Confidence 3457888888886
No 192
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=63.52 E-value=2.6 Score=28.45 Aligned_cols=57 Identities=12% Similarity=0.119 Sum_probs=38.3
Q ss_pred CCCCCcccccccccccccccc---------c-c-ccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhc
Q 022481 4 EPPAFQEATRCDVCKCSFNTF---------R-R-RHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 68 (296)
Q Consensus 4 ~w~~~~~~~~C~~C~~~f~~~---------~-r-~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 68 (296)
.|.-+.+...|.+|...|.-. . . ...-..||.+|+..|...++. ....|..|...+.
T Consensus 8 ~w~~~~~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~--------~~~~CP~CR~~~~ 75 (81)
T 2ecl_A 8 MWSWDVECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVK--------QNNRCPLCQQDWV 75 (81)
T ss_dssp CCCCSCCCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTT--------TCCBCTTTCCBCC
T ss_pred EeeecCCCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHH--------hCCCCCCcCCCcc
Confidence 577777888999999999541 1 1 112235999999999766532 1247888876543
No 193
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.49 E-value=2.5 Score=26.92 Aligned_cols=29 Identities=24% Similarity=0.691 Sum_probs=19.2
Q ss_pred cccccccccccccc-----ccccccccccceEcC
Q 022481 11 ATRCDVCKCSFNTF-----RRRHHCRCCGRTLCH 39 (296)
Q Consensus 11 ~~~C~~C~~~f~~~-----~r~hhCr~Cg~~~C~ 39 (296)
.-.|..|++.|... .+.+.|..||+.|-.
T Consensus 18 ~~~C~~C~k~f~~~~~l~~~~~~~C~~C~~~f~~ 51 (73)
T 2ctu_A 18 SQKCSKCGIIFIRRSTLSRRKTPMCEKCRKDSCQ 51 (73)
T ss_dssp EEECSSSCCEEECCCCCCCSSSCCCHHHHHTCSC
T ss_pred CeeCCcccchhCCHHHhCcCCCCCCCCCChhhcC
Confidence 35688888887622 456777777777643
No 194
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=62.26 E-value=0.95 Score=30.55 Aligned_cols=55 Identities=13% Similarity=0.245 Sum_probs=35.7
Q ss_pred ccccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhcc
Q 022481 9 QEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSR 69 (296)
Q Consensus 9 ~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~ 69 (296)
.+...|.+|...|.--. . -.||++||..|...+...... ......|..|...+..
T Consensus 17 ~~~~~C~IC~~~~~~p~---~-~~CgH~fC~~Ci~~~~~~~~~--~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecw_A 17 KEEVTCPICLELLKEPV---S-ADCNHSFCRACITLNYESNRN--TDGKGNCPVCRVPYPF 71 (85)
T ss_dssp CTTTSCTTTCSCCSSCE---E-CTTSCCBCHHHHHHHHHHSBC--TTSCBCCTTTCCCCCT
T ss_pred ccCCCCcCCChhhCcce---e-CCCCCHHHHHHHHHHHHhccC--CCCCCCCCCCCCcCCH
Confidence 34568999988875321 2 359999999998665432211 1235778888776653
No 195
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=61.71 E-value=2.4 Score=29.27 Aligned_cols=50 Identities=12% Similarity=0.163 Sum_probs=33.1
Q ss_pred cccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhc
Q 022481 10 EATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 68 (296)
Q Consensus 10 ~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 68 (296)
+...|.+|...|..-.. ..--.||.+||..|...++. ....|-.|...+.
T Consensus 39 ~~~~C~IC~~~~~~~~~-~~~l~C~H~Fh~~Ci~~wl~--------~~~~CP~Cr~~~~ 88 (91)
T 2l0b_A 39 QEMCCPICCSEYVKGDV-ATELPCHHYFHKPCVSIWLQ--------KSGTCPVCRCMFP 88 (91)
T ss_dssp SCSEETTTTEECCTTCE-EEEETTTEEEEHHHHHHHHT--------TTCBCTTTCCBSS
T ss_pred CCCCCcccChhhcCCCc-EEecCCCChHHHHHHHHHHH--------cCCcCcCcCccCC
Confidence 45679999998865322 22234999999999766542 1247888876543
No 196
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=61.32 E-value=2.9 Score=25.75 Aligned_cols=23 Identities=26% Similarity=0.559 Sum_probs=12.7
Q ss_pred cccccccccccccccccccccccce
Q 022481 12 TRCDVCKCSFNTFRRRHHCRCCGRT 36 (296)
Q Consensus 12 ~~C~~C~~~f~~~~r~hhCr~Cg~~ 36 (296)
..|..|+.. .-.+..+||.||..
T Consensus 15 ~iCpkC~a~--~~~gaw~CrKCG~~ 37 (51)
T 3j21_g 15 YVCLRCGAT--NPWGAKKCRKCGYK 37 (51)
T ss_dssp EECTTTCCE--ECTTCSSCSSSSSC
T ss_pred ccCCCCCCc--CCCCceecCCCCCc
Confidence 456666654 33445566666553
No 197
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=61.12 E-value=2 Score=26.48 Aligned_cols=33 Identities=21% Similarity=0.394 Sum_probs=23.8
Q ss_pred ccccccccccccccccccccccccccceEcCCCCCCc
Q 022481 9 QEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQ 45 (296)
Q Consensus 9 ~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~ 45 (296)
.+...|.+|...|..-.. -.||++||..|...+
T Consensus 13 ~~~~~C~IC~~~~~~p~~----~~CgH~fC~~Ci~~~ 45 (58)
T 2ecj_A 13 QVEASCSVCLEYLKEPVI----IECGHNFCKACITRW 45 (58)
T ss_dssp CCCCBCSSSCCBCSSCCC----CSSCCCCCHHHHHHH
T ss_pred ccCCCCccCCcccCccEe----CCCCCccCHHHHHHH
Confidence 345689999988763211 369999999997654
No 198
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=60.71 E-value=2.7 Score=26.37 Aligned_cols=12 Identities=33% Similarity=0.910 Sum_probs=9.4
Q ss_pred cccccccccccc
Q 022481 11 ATRCDVCKCSFN 22 (296)
Q Consensus 11 ~~~C~~C~~~f~ 22 (296)
.-.|..|++.|.
T Consensus 10 ~~~C~~C~k~f~ 21 (66)
T 2drp_A 10 TYRCKVCSRVYT 21 (66)
T ss_dssp EEECTTTCCEES
T ss_pred ceECCCCcchhC
Confidence 356888999887
No 199
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=60.31 E-value=8.2 Score=25.23 Aligned_cols=58 Identities=14% Similarity=0.273 Sum_probs=29.8
Q ss_pred ccccccccccccc-----cccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhcccC
Q 022481 11 ATRCDVCKCSFNT-----FRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRTG 71 (296)
Q Consensus 11 ~~~C~~C~~~f~~-----~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~~ 71 (296)
+..|..|++++.- ..+..| ..| ..|..|......-..+......-.|..||..+....
T Consensus 5 ~~~C~~C~~~I~~~~v~a~~~~wH-~~C--F~C~~C~~~L~~~~~f~~~~~~~yC~~C~~~~~~~~ 67 (73)
T 1wig_A 5 SSGCDSCEKYITGRVLEAGEKHYH-PSC--ALCVRCGQMFAEGEEMYLQGSSIWHPACRQAARTED 67 (73)
T ss_dssp CCSCSSSCCCCSSCCBCCSSCCBC-TTT--SCCSSSCCCCCSSCCCEEETTEEECTTHHHHTSSSS
T ss_pred cCCcccCCCEecCeeEEeCCCCCC-CCc--CEeCCCCCCCCCCCeeEeeCCEEEChHHChHhhccc
Confidence 5689999987652 223333 222 234445432111111211233567999999876543
No 200
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.27 E-value=2.4 Score=28.45 Aligned_cols=47 Identities=17% Similarity=0.434 Sum_probs=32.5
Q ss_pred cccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhc
Q 022481 10 EATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 68 (296)
Q Consensus 10 ~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 68 (296)
+...|.+|...|..- .--.||++||..|...+.. ....|..|...+.
T Consensus 14 ~~~~C~IC~~~~~~p----~~~~CgH~fC~~Ci~~~~~--------~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 14 IPFRCFICRQAFQNP----VVTKCRHYFCESCALEHFR--------ATPRCYICDQPTG 60 (81)
T ss_dssp CCSBCSSSCSBCCSE----EECTTSCEEEHHHHHHHHH--------HCSBCSSSCCBCC
T ss_pred CCCCCcCCCchhcCe----eEccCCCHhHHHHHHHHHH--------CCCcCCCcCcccc
Confidence 456899998887532 1247999999999866532 2456888876653
No 201
>1vq8_1 50S ribosomal protein L37E; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.2 PDB: 1vq4_1* 1vq5_1* 1vq6_1* 1vq7_1* 1s72_1* 1vq9_1* 1vqk_1* 1vql_1* 1vqm_1* 1vqn_1* 1vqo_1* 1vqp_1* 1yhq_1* 1yi2_1* 1yij_1* 1yit_1* 1yj9_1* 1yjn_1* 1yjw_1* 2otj_1* ...
Probab=59.92 E-value=3.9 Score=25.65 Aligned_cols=16 Identities=31% Similarity=0.684 Sum_probs=8.2
Q ss_pred ccccccccc--cccccce
Q 022481 21 FNTFRRRHH--CRCCGRT 36 (296)
Q Consensus 21 f~~~~r~hh--Cr~Cg~~ 36 (296)
|+-.+++-| ||.||+.
T Consensus 9 fGKr~~ktH~~CrRCG~~ 26 (57)
T 1vq8_1 9 QGKKNTTTHTKCRRCGEK 26 (57)
T ss_dssp HTTCCCCCEEECTTTCSE
T ss_pred ccccCCCccccccccCCh
Confidence 444433433 6666665
No 202
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=59.29 E-value=2.8 Score=31.26 Aligned_cols=26 Identities=31% Similarity=0.763 Sum_probs=17.1
Q ss_pred ccccccccccccc------------ccccccccccceE
Q 022481 12 TRCDVCKCSFNTF------------RRRHHCRCCGRTL 37 (296)
Q Consensus 12 ~~C~~C~~~f~~~------------~r~hhCr~Cg~~~ 37 (296)
-.|..|++.|... .|.+.|..||+.|
T Consensus 23 y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F 60 (133)
T 2lt7_A 23 YICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVF 60 (133)
T ss_dssp EEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEE
T ss_pred eECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeec
Confidence 3688888888632 1445677777766
No 203
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=59.11 E-value=3.2 Score=23.75 Aligned_cols=12 Identities=33% Similarity=0.802 Sum_probs=9.3
Q ss_pred cccccccccccc
Q 022481 11 ATRCDVCKCSFN 22 (296)
Q Consensus 11 ~~~C~~C~~~f~ 22 (296)
.-.|..|++.|.
T Consensus 10 ~~~C~~C~k~f~ 21 (45)
T 2epq_A 10 PYSCPVCGLRFK 21 (45)
T ss_dssp SSEETTTTEECS
T ss_pred CCcCCCCCcccC
Confidence 457888888886
No 204
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=58.92 E-value=2.3 Score=29.68 Aligned_cols=10 Identities=20% Similarity=0.597 Sum_probs=8.0
Q ss_pred cccccccccc
Q 022481 12 TRCDVCKCSF 21 (296)
Q Consensus 12 ~~C~~C~~~f 21 (296)
-.|..|++.|
T Consensus 35 ~~C~~C~k~F 44 (96)
T 2ctd_A 35 VSCPTCQAVG 44 (96)
T ss_dssp EECTTTCSCE
T ss_pred cCCCCCCCCc
Confidence 3688888888
No 205
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=58.85 E-value=1.8 Score=27.35 Aligned_cols=50 Identities=18% Similarity=0.513 Sum_probs=34.0
Q ss_pred cccccccccccccc---ccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhc
Q 022481 11 ATRCDVCKCSFNTF---RRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 68 (296)
Q Consensus 11 ~~~C~~C~~~f~~~---~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 68 (296)
...|.+|...|..- .+...-..||.+||..|...++.. ...|-.|...+.
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~--------~~~CP~Cr~~~~ 55 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN--------ANTCPTCRKKIN 55 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHH--------CSBCTTTCCBCT
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHc--------CCCCCCCCccCC
Confidence 45799999888642 233355689999999998665321 346777766554
No 206
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=58.69 E-value=2.6 Score=36.52 Aligned_cols=61 Identities=16% Similarity=0.392 Sum_probs=39.9
Q ss_pred ccccccccccc--ccccc--------cccccccccc------eEcCCCCCCc-eecCCCC--------CCCceeccccch
Q 022481 10 EATRCDVCKCS--FNTFR--------RRHHCRCCGR------TLCHEHSSDQ-MTLPQFG--------IHTNVRVCADCF 64 (296)
Q Consensus 10 ~~~~C~~C~~~--f~~~~--------r~hhCr~Cg~------~~C~~c~~~~-~~~~~~~--------~~~~~rvC~~C~ 64 (296)
....|.+|+.. .+.++ |..||-.||. +-|..|-+.+ +.+-... ....+-+|..|.
T Consensus 181 ~~~~CPvCGs~P~~s~l~~~g~~~G~R~l~Cs~C~t~W~~~R~~C~~Cg~~~~l~y~~~e~~~~~~~~~~~r~e~C~~C~ 260 (309)
T 2fiy_A 181 SRTLCPACGSPPMAGMIRQGGKETGLRYLSCSLCACEWHYVRIKCSHCEESKHLAYLSLEHDGQPAEKAVLRAETCPSCQ 260 (309)
T ss_dssp TCSSCTTTCCCEEEEEEEC----CCEEEEEETTTCCEEECCTTSCSSSCCCSCCEEECCCC-CCCSTTCSEEEEEETTTT
T ss_pred cCCCCCCCCCcCceeEEeecCCCCCcEEEEeCCCCCEEeecCcCCcCCCCCCCeeEEEecCccccCCCcceEEEEccccc
Confidence 46799999984 33332 6789999985 4788886643 2222221 123467899999
Q ss_pred hhhccc
Q 022481 65 NSSSRT 70 (296)
Q Consensus 65 ~~~~~~ 70 (296)
..++..
T Consensus 261 ~YlK~~ 266 (309)
T 2fiy_A 261 GYLKQF 266 (309)
T ss_dssp EEEEEE
T ss_pred chHhhh
Confidence 888765
No 207
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=57.95 E-value=4.6 Score=26.15 Aligned_cols=32 Identities=19% Similarity=0.489 Sum_probs=24.0
Q ss_pred Cccccccccccccccccccccccccc-cceEcCCCCCC
Q 022481 8 FQEATRCDVCKCSFNTFRRRHHCRCC-GRTLCHEHSSD 44 (296)
Q Consensus 8 ~~~~~~C~~C~~~f~~~~r~hhCr~C-g~~~C~~c~~~ 44 (296)
.++-..|.+|+..=+ ..|.-| |.+||..|-..
T Consensus 5 ~ee~pWC~ICneDAt-----lrC~gCdgDLYC~rC~rE 37 (67)
T 2d8v_A 5 SSGLPWCCICNEDAT-----LRCAGCDGDLYCARCFRE 37 (67)
T ss_dssp CCCCSSCTTTCSCCC-----EEETTTTSEEECSSHHHH
T ss_pred CcCCCeeEEeCCCCe-----EEecCCCCceehHHHHHH
Confidence 456678999988632 569999 99999988543
No 208
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=56.88 E-value=3.8 Score=27.83 Aligned_cols=29 Identities=21% Similarity=0.631 Sum_probs=19.6
Q ss_pred cccccccccccccccc------------cccccccccceEc
Q 022481 10 EATRCDVCKCSFNTFR------------RRHHCRCCGRTLC 38 (296)
Q Consensus 10 ~~~~C~~C~~~f~~~~------------r~hhCr~Cg~~~C 38 (296)
..-.|..|++.|.... +.+.|..||+.|-
T Consensus 7 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 47 (96)
T 2dmd_A 7 GPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAA 47 (96)
T ss_dssp CCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEES
T ss_pred cCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccC
Confidence 4467999999997321 3456777777763
No 209
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=56.86 E-value=1.8 Score=27.68 Aligned_cols=51 Identities=20% Similarity=0.473 Sum_probs=32.1
Q ss_pred cccccccc-cccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhcc
Q 022481 12 TRCDVCKC-SFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSR 69 (296)
Q Consensus 12 ~~C~~C~~-~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~ 69 (296)
..|.+|.. .|.--.++..=-.||++||..|...... +....|-.|...+..
T Consensus 4 ~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~-------~~~~~CP~Cr~~~~~ 55 (65)
T 1g25_A 4 QGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFV-------RGAGNCPECGTPLRK 55 (65)
T ss_dssp TCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHH-------TTSSSCTTTCCCCSS
T ss_pred CcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHH-------cCCCcCCCCCCcccc
Confidence 46999988 6653322222357999999999765422 113467777766643
No 210
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=56.65 E-value=3.5 Score=26.96 Aligned_cols=25 Identities=32% Similarity=0.864 Sum_probs=15.4
Q ss_pred cccccccccccc------------ccccccccccceE
Q 022481 13 RCDVCKCSFNTF------------RRRHHCRCCGRTL 37 (296)
Q Consensus 13 ~C~~C~~~f~~~------------~r~hhCr~Cg~~~ 37 (296)
.|..|++.|... .+.+.|..||+.|
T Consensus 3 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f 39 (82)
T 2kmk_A 3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRF 39 (82)
T ss_dssp ECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEE
T ss_pred cCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhh
Confidence 477888887622 1345666666665
No 211
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=56.47 E-value=4 Score=28.01 Aligned_cols=51 Identities=20% Similarity=0.560 Sum_probs=33.2
Q ss_pred CccccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhh
Q 022481 8 FQEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSS 67 (296)
Q Consensus 8 ~~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~ 67 (296)
..+.-.|.+|...|.- -..-..||++||..|...+..- .....|-.|...+
T Consensus 10 ~~~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~------~~~~~CP~Cr~~~ 60 (92)
T 3ztg_A 10 IPDELLCLICKDIMTD---AVVIPCCGNSYCDECIRTALLE------SDEHTCPTCHQND 60 (92)
T ss_dssp CCTTTEETTTTEECSS---CEECTTTCCEECHHHHHHHHHH------CTTCCCTTTCCSS
T ss_pred CCcCCCCCCCChhhcC---ceECCCCCCHHHHHHHHHHHHh------cCCCcCcCCCCcC
Confidence 3456789999987762 2223349999999997654321 1235788887654
No 212
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=56.37 E-value=4 Score=27.44 Aligned_cols=57 Identities=18% Similarity=0.406 Sum_probs=37.5
Q ss_pred CCCccccccccccccccccccc-cccccccceEcCCCCCCceecCCCCCCCceeccccchhhhccc
Q 022481 6 PAFQEATRCDVCKCSFNTFRRR-HHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRT 70 (296)
Q Consensus 6 ~~~~~~~~C~~C~~~f~~~~r~-hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~ 70 (296)
...++...|.+|-..|+.-..+ .-| .||+.||..|...... .....|-.|...+...
T Consensus 6 ~~~~~~~~CpICle~~~~~d~~~~p~-~CGH~fC~~Cl~~~~~-------~~~~~CP~CR~~~~~~ 63 (78)
T 1e4u_A 6 DAKEDPVECPLCMEPLEIDDINFFPC-TCGYQICRFCWHRIRT-------DENGLCPACRKPYPED 63 (78)
T ss_dssp CCCCCCCBCTTTCCBCCTTTTTCCSS-TTSCCCCHHHHHHHTT-------SSCSBCTTTCCBCSSC
T ss_pred cccccCCcCCccCccCcccccccccc-CCCCCcCHHHHHHHHh-------cCCCCCCCCCCccCCC
Confidence 3455667899999988643222 223 5999999999754311 1246788888777544
No 213
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=56.26 E-value=3.5 Score=28.16 Aligned_cols=26 Identities=31% Similarity=0.761 Sum_probs=15.8
Q ss_pred ccccccccccccccc----ccccccccceEcC
Q 022481 12 TRCDVCKCSFNTFRR----RHHCRCCGRTLCH 39 (296)
Q Consensus 12 ~~C~~C~~~f~~~~r----~hhCr~Cg~~~C~ 39 (296)
..|..|++. .++| ..||+.||..|=.
T Consensus 36 y~CpfCGk~--~vkR~a~GIW~C~kCg~~~AG 65 (83)
T 3j21_i 36 HTCPVCGRK--AVKRISTGIWQCQKCGATFAG 65 (83)
T ss_dssp BCCSSSCSS--CEEEEETTEEEETTTCCEEEC
T ss_pred cCCCCCCCc--eeEecCcCeEEcCCCCCEEeC
Confidence 467777764 2322 4577777777644
No 214
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=56.04 E-value=3.9 Score=27.13 Aligned_cols=25 Identities=32% Similarity=0.864 Sum_probs=14.1
Q ss_pred ccccccccccccccc----ccccccccceEc
Q 022481 12 TRCDVCKCSFNTFRR----RHHCRCCGRTLC 38 (296)
Q Consensus 12 ~~C~~C~~~f~~~~r----~hhCr~Cg~~~C 38 (296)
..|..|++. .++| ..||+.||..|=
T Consensus 27 y~C~fCgk~--~vkR~a~GIW~C~~C~~~~A 55 (72)
T 3jyw_9 27 YDCSFCGKK--TVKRGAAGIWTCSCCKKTVA 55 (72)
T ss_dssp BCCSSCCSS--CBSBCSSSCBCCSSSCCCCC
T ss_pred ccCCCCCCc--eeEecCCCeEECCCCCCEEe
Confidence 457777653 2332 356777766653
No 215
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=55.30 E-value=7.8 Score=24.63 Aligned_cols=36 Identities=17% Similarity=0.439 Sum_probs=27.3
Q ss_pred cccccccccccccccc--ccccccc--ccceEcCCCCCCc
Q 022481 10 EATRCDVCKCSFNTFR--RRHHCRC--CGRTLCHEHSSDQ 45 (296)
Q Consensus 10 ~~~~C~~C~~~f~~~~--r~hhCr~--Cg~~~C~~c~~~~ 45 (296)
..+.|..|+....... -+-.|+. ||..||..|....
T Consensus 5 ~~k~CP~C~~~Iek~~GCnhmtC~~~~C~~~FCw~C~~~~ 44 (60)
T 1wd2_A 5 NTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPW 44 (60)
T ss_dssp CCCCCTTTCCCCSSCCSCCSSSCCSSGGGSCCSSSSCSCS
T ss_pred cceECcCCCCeeEeCCCCCcEEECCCCcCCEEeeCcCCCc
Confidence 3578999988765432 3667888 9999999998653
No 216
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=55.09 E-value=3.8 Score=27.39 Aligned_cols=26 Identities=27% Similarity=0.727 Sum_probs=15.9
Q ss_pred cccc--ccccccccc------------ccccccccccceE
Q 022481 12 TRCD--VCKCSFNTF------------RRRHHCRCCGRTL 37 (296)
Q Consensus 12 ~~C~--~C~~~f~~~------------~r~hhCr~Cg~~~ 37 (296)
-.|. .|++.|... .+.+.|..||+.|
T Consensus 5 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f 44 (90)
T 1a1h_A 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNF 44 (90)
T ss_dssp EECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEE
T ss_pred eECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCccc
Confidence 4576 588888632 1345677777666
No 217
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=54.56 E-value=4.2 Score=27.25 Aligned_cols=26 Identities=27% Similarity=0.815 Sum_probs=17.9
Q ss_pred ccccccccccccc------------ccccccccccceE
Q 022481 12 TRCDVCKCSFNTF------------RRRHHCRCCGRTL 37 (296)
Q Consensus 12 ~~C~~C~~~f~~~------------~r~hhCr~Cg~~~ 37 (296)
-.|..|++.|... .+.+.|..||+.|
T Consensus 4 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f 41 (88)
T 1llm_C 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKF 41 (88)
T ss_dssp EECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEE
T ss_pred CcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCcc
Confidence 4799999999732 1345677777766
No 218
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=53.49 E-value=2.7 Score=32.60 Aligned_cols=48 Identities=13% Similarity=0.384 Sum_probs=33.3
Q ss_pred ccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhc
Q 022481 11 ATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 68 (296)
Q Consensus 11 ~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 68 (296)
...|.+|...|.- -.....||++||..|...++. .....|..|...+.
T Consensus 54 ~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~-------~~~~~CP~Cr~~~~ 101 (165)
T 2ckl_B 54 ELMCPICLDMLKN---TMTTKECLHRFCADCIITALR-------SGNKECPTCRKKLV 101 (165)
T ss_dssp HHBCTTTSSBCSS---EEEETTTCCEEEHHHHHHHHH-------TTCCBCTTTCCBCC
T ss_pred CCCCcccChHhhC---cCEeCCCCChhHHHHHHHHHH-------hCcCCCCCCCCcCC
Confidence 3489999877753 334458999999999866543 12456888877653
No 219
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=53.23 E-value=4.6 Score=28.11 Aligned_cols=26 Identities=23% Similarity=0.594 Sum_probs=16.3
Q ss_pred ccccccccccccccc----ccccccccceEcC
Q 022481 12 TRCDVCKCSFNTFRR----RHHCRCCGRTLCH 39 (296)
Q Consensus 12 ~~C~~C~~~f~~~~r----~hhCr~Cg~~~C~ 39 (296)
..|..|++. .++| ..||+.||..|=.
T Consensus 37 y~CpfCgk~--~vkR~a~GIW~C~~Cg~~~AG 66 (92)
T 3iz5_m 37 YFCEFCGKF--AVKRKAVGIWGCKDCGKVKAG 66 (92)
T ss_dssp BCCTTTCSS--CBEEEETTEEECSSSCCEEEC
T ss_pred ccCcccCCC--eeEecCcceEEcCCCCCEEeC
Confidence 467777764 2332 4678888777744
No 220
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=53.20 E-value=2.8 Score=29.37 Aligned_cols=47 Identities=19% Similarity=0.436 Sum_probs=32.1
Q ss_pred cccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhcc
Q 022481 12 TRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSR 69 (296)
Q Consensus 12 ~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~ 69 (296)
..|.+|...|.- -.....||++||..|...+.. ....|..|...+..
T Consensus 23 ~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~--------~~~~CP~Cr~~~~~ 69 (99)
T 2y43_A 23 LRCGICFEYFNI---AMIIPQCSHNYCSLCIRKFLS--------YKTQCPTCCVTVTE 69 (99)
T ss_dssp TBCTTTCSBCSS---EEECTTTCCEEEHHHHHHHHT--------TCCBCTTTCCBCCG
T ss_pred CCcccCChhhCC---cCEECCCCCHhhHHHHHHHHH--------CCCCCCCCCCcCCh
Confidence 579999887763 222347999999999765532 12578888776543
No 221
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=53.00 E-value=3.3 Score=29.55 Aligned_cols=49 Identities=14% Similarity=0.292 Sum_probs=33.2
Q ss_pred cccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhcc
Q 022481 10 EATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSR 69 (296)
Q Consensus 10 ~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~ 69 (296)
+.-.|.+|...|.- -...-.||++||..|...+... ...|-.|...+..
T Consensus 14 ~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~--------~~~CP~Cr~~~~~ 62 (108)
T 2ckl_A 14 PHLMCVLCGGYFID---ATTIIECLHSFCKTCIVRYLET--------SKYCPICDVQVHK 62 (108)
T ss_dssp GGTBCTTTSSBCSS---EEEETTTCCEEEHHHHHHHHTS--------CSBCTTTCCBSCS
T ss_pred CcCCCccCChHHhC---cCEeCCCCChhhHHHHHHHHHh--------CCcCcCCCccccc
Confidence 34679999887752 3333489999999997654321 2678888776643
No 222
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=52.87 E-value=6.5 Score=26.51 Aligned_cols=28 Identities=21% Similarity=0.673 Sum_probs=18.9
Q ss_pred cccccccccccccccc------------cccccccccceE
Q 022481 10 EATRCDVCKCSFNTFR------------RRHHCRCCGRTL 37 (296)
Q Consensus 10 ~~~~C~~C~~~f~~~~------------r~hhCr~Cg~~~ 37 (296)
..-.|..|++.|.... +.+.|..||+.|
T Consensus 6 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f 45 (95)
T 2yt9_A 6 SGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRF 45 (95)
T ss_dssp SCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEE
T ss_pred CCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCcc
Confidence 4567999999997321 335577777766
No 223
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=52.60 E-value=1.4 Score=33.12 Aligned_cols=45 Identities=18% Similarity=0.372 Sum_probs=30.0
Q ss_pred cccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhc
Q 022481 12 TRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 68 (296)
Q Consensus 12 ~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 68 (296)
-.|.+|...|.-- .--.||++||..|...+. .....|..|...+.
T Consensus 54 ~~C~iC~~~~~~~----~~~~CgH~fc~~Ci~~~~--------~~~~~CP~Cr~~~~ 98 (138)
T 4ayc_A 54 LQCIICSEYFIEA----VTLNCAHSFCSYCINEWM--------KRKIECPICRKDIK 98 (138)
T ss_dssp SBCTTTCSBCSSE----EEETTSCEEEHHHHHHHT--------TTCSBCTTTCCBCC
T ss_pred CCCcccCcccCCc----eECCCCCCccHHHHHHHH--------HcCCcCCCCCCcCC
Confidence 3699999887521 223699999999975542 12345888866553
No 224
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=52.26 E-value=5.3 Score=24.16 Aligned_cols=8 Identities=25% Similarity=0.908 Sum_probs=4.6
Q ss_pred cccccccc
Q 022481 12 TRCDVCKC 19 (296)
Q Consensus 12 ~~C~~C~~ 19 (296)
..|..|+.
T Consensus 6 ~~CP~C~~ 13 (50)
T 1pft_A 6 KVCPACES 13 (50)
T ss_dssp CSCTTTSC
T ss_pred EeCcCCCC
Confidence 35666655
No 225
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.93 E-value=5.2 Score=28.25 Aligned_cols=13 Identities=23% Similarity=0.818 Sum_probs=10.7
Q ss_pred ccccccccccccc
Q 022481 10 EATRCDVCKCSFN 22 (296)
Q Consensus 10 ~~~~C~~C~~~f~ 22 (296)
..-.|..|++.|.
T Consensus 18 ~~~~C~~C~k~f~ 30 (115)
T 2dmi_A 18 SKFRCKDCSAAYD 30 (115)
T ss_dssp CSEEBSSSSCEES
T ss_pred CCEECCccCchhc
Confidence 4467999999997
No 226
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=51.87 E-value=5.1 Score=24.07 Aligned_cols=13 Identities=23% Similarity=0.636 Sum_probs=11.2
Q ss_pred cccccccccceEc
Q 022481 26 RRHHCRCCGRTLC 38 (296)
Q Consensus 26 r~hhCr~Cg~~~C 38 (296)
+++.|+.||.|+-
T Consensus 3 ~~y~C~vCGyvyd 15 (46)
T 6rxn_A 3 QKYVCNVCGYEYD 15 (46)
T ss_dssp CCEEETTTCCEEC
T ss_pred CEEECCCCCeEEe
Confidence 5789999999984
No 227
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=51.48 E-value=3.2 Score=27.50 Aligned_cols=48 Identities=13% Similarity=0.146 Sum_probs=32.4
Q ss_pred cccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhc
Q 022481 10 EATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 68 (296)
Q Consensus 10 ~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 68 (296)
+.-.|.+|...|.-- .--.||++||..|...++. .....|-.|...+.
T Consensus 7 ~~~~C~IC~~~~~~P----v~~~CgH~fc~~Ci~~~~~-------~~~~~CP~C~~~~~ 54 (78)
T 1t1h_A 7 EYFRCPISLELMKDP----VIVSTGQTYERSSIQKWLD-------AGHKTCPKSQETLL 54 (78)
T ss_dssp SSSSCTTTSCCCSSE----EEETTTEEEEHHHHHHHHT-------TTCCBCTTTCCBCS
T ss_pred ccCCCCCccccccCC----EEcCCCCeecHHHHHHHHH-------HCcCCCCCCcCCCC
Confidence 456899998877521 1226999999999766542 12456888876654
No 228
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=51.30 E-value=5.3 Score=27.92 Aligned_cols=28 Identities=29% Similarity=0.590 Sum_probs=19.2
Q ss_pred ccccccccccccccc------------ccccccccccceEc
Q 022481 10 EATRCDVCKCSFNTF------------RRRHHCRCCGRTLC 38 (296)
Q Consensus 10 ~~~~C~~C~~~f~~~------------~r~hhCr~Cg~~~C 38 (296)
..-.| .|++.|... .+.+.|..||+.|-
T Consensus 9 k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 48 (110)
T 2csh_A 9 KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFK 48 (110)
T ss_dssp CCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEES
T ss_pred CCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccC
Confidence 34578 899999732 14467888888774
No 229
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=50.71 E-value=6.1 Score=27.33 Aligned_cols=28 Identities=21% Similarity=0.580 Sum_probs=19.3
Q ss_pred ccccccccccccccc------------ccccccccccceE
Q 022481 10 EATRCDVCKCSFNTF------------RRRHHCRCCGRTL 37 (296)
Q Consensus 10 ~~~~C~~C~~~f~~~------------~r~hhCr~Cg~~~ 37 (296)
..-.|..|++.|... .+.+.|..||+.|
T Consensus 16 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f 55 (106)
T 2ee8_A 16 KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAF 55 (106)
T ss_dssp CCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBC
T ss_pred cCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchh
Confidence 456899999999732 1345677777666
No 230
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=50.71 E-value=6.3 Score=25.13 Aligned_cols=28 Identities=25% Similarity=0.681 Sum_probs=17.8
Q ss_pred cccccc--ccccccccc------------ccccccccccceE
Q 022481 10 EATRCD--VCKCSFNTF------------RRRHHCRCCGRTL 37 (296)
Q Consensus 10 ~~~~C~--~C~~~f~~~------------~r~hhCr~Cg~~~ 37 (296)
..-.|. .|++.|... .+.+.|..||+.|
T Consensus 18 ~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f 59 (73)
T 1f2i_G 18 RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF 59 (73)
T ss_dssp CCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEE
T ss_pred CccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchh
Confidence 345786 599988632 1345677777666
No 231
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=49.72 E-value=5.7 Score=27.66 Aligned_cols=26 Identities=31% Similarity=0.813 Sum_probs=15.5
Q ss_pred ccccccccccccccc----ccccccccceEcC
Q 022481 12 TRCDVCKCSFNTFRR----RHHCRCCGRTLCH 39 (296)
Q Consensus 12 ~~C~~C~~~f~~~~r----~hhCr~Cg~~~C~ 39 (296)
..|..|++. .++| ..||+.||..|=.
T Consensus 37 y~CpfCgk~--~vkR~a~GIW~C~~C~~~~AG 66 (92)
T 3izc_m 37 YDCSFCGKK--TVKRGAAGIWTCSCCKKTVAG 66 (92)
T ss_dssp CCCSSSCSS--CCEEEETTEEECTTTCCEEEC
T ss_pred CcCCCCCCc--eeeecccceEEcCCCCCEEeC
Confidence 457777753 2332 3577777777644
No 232
>2jmo_A Parkin; IBR, E3 ligase, zinc binding domain, RBR; NMR {Homo sapiens}
Probab=49.18 E-value=15 Score=24.60 Aligned_cols=35 Identities=23% Similarity=0.578 Sum_probs=25.3
Q ss_pred ccccccc--ccccccc--cccccccc-----cccceEcCCCCCC
Q 022481 10 EATRCDV--CKCSFNT--FRRRHHCR-----CCGRTLCHEHSSD 44 (296)
Q Consensus 10 ~~~~C~~--C~~~f~~--~~r~hhCr-----~Cg~~~C~~c~~~ 44 (296)
....|.. |+..... -.++-.|. .||..||..|...
T Consensus 24 ~~~~CP~p~C~~~v~~~~~~~~v~C~~~~~~~C~~~FC~~C~~~ 67 (80)
T 2jmo_A 24 GGVLCPRPGCGAGLLPEPDQRKVTCEGGNGLGCGFAFCRECKEA 67 (80)
T ss_dssp SSCCCCSSSCCCCCCCCSCTTSBCTTSSSTTCCSCCEETTTTEE
T ss_pred CcEECCCCCCCcccEECCCCCcCCCCCCCCCCCCCeeccccCcc
Confidence 3666776 7775432 34678897 8999999999743
No 233
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=49.11 E-value=7.2 Score=24.36 Aligned_cols=27 Identities=30% Similarity=0.533 Sum_probs=15.0
Q ss_pred ccccccccc-cc-cccccccccccccceE
Q 022481 11 ATRCDVCKC-SF-NTFRRRHHCRCCGRTL 37 (296)
Q Consensus 11 ~~~C~~C~~-~f-~~~~r~hhCr~Cg~~~ 37 (296)
...|..|+. .| ....-|++|..||.+.
T Consensus 18 ~~fCPkCG~~~~ma~~~dr~~C~kCgyt~ 46 (55)
T 2k4x_A 18 HRFCPRCGPGVFLAEHADRYSCGRCGYTE 46 (55)
T ss_dssp SCCCTTTTTTCCCEECSSEEECTTTCCCE
T ss_pred cccCcCCCCceeEeccCCEEECCCCCCEE
Confidence 466887876 23 1122356666666653
No 234
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6
Probab=48.80 E-value=2.7 Score=26.03 Aligned_cols=20 Identities=35% Similarity=0.918 Sum_probs=14.6
Q ss_pred ccccccccccccccccccccccc
Q 022481 12 TRCDVCKCSFNTFRRRHHCRCCG 34 (296)
Q Consensus 12 ~~C~~C~~~f~~~~r~hhCr~Cg 34 (296)
-.|..|++. +.+|.||..|-
T Consensus 7 ~~Cd~C~~~---ig~R~~C~~C~ 26 (52)
T 1tot_A 7 YTCNECKHH---VETRWHCTVCE 26 (52)
T ss_dssp EEETTTTEE---ESSEEEESSSS
T ss_pred EECCCCCCC---CcceEEcCCCC
Confidence 468888886 24678888773
No 235
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=48.57 E-value=6.1 Score=28.87 Aligned_cols=12 Identities=17% Similarity=0.623 Sum_probs=7.2
Q ss_pred cccccccccceE
Q 022481 26 RRHHCRCCGRTL 37 (296)
Q Consensus 26 r~hhCr~Cg~~~ 37 (296)
-+..|+.||+.|
T Consensus 72 ~~~~C~~CG~~~ 83 (119)
T 2kdx_A 72 VELECKDCSHVF 83 (119)
T ss_dssp CEEECSSSSCEE
T ss_pred ceEEcCCCCCEE
Confidence 356666666654
No 236
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=48.46 E-value=5.8 Score=24.49 Aligned_cols=14 Identities=21% Similarity=0.619 Sum_probs=11.4
Q ss_pred cccccccccceEcC
Q 022481 26 RRHHCRCCGRTLCH 39 (296)
Q Consensus 26 r~hhCr~Cg~~~C~ 39 (296)
+++.|+.||.|+-.
T Consensus 1 ~~~~C~~CGyvYd~ 14 (52)
T 1yk4_A 1 AKLSCKICGYIYDE 14 (52)
T ss_dssp CEEEESSSSCEEET
T ss_pred CcEEeCCCCeEECC
Confidence 46889999999854
No 237
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=48.08 E-value=8.2 Score=24.84 Aligned_cols=26 Identities=23% Similarity=0.442 Sum_probs=17.9
Q ss_pred cccccccccccccccc-cccccccccc
Q 022481 10 EATRCDVCKCSFNTFR-RRHHCRCCGR 35 (296)
Q Consensus 10 ~~~~C~~C~~~f~~~~-r~hhCr~Cg~ 35 (296)
-.-.|..|+..|.+-. ....|+.||.
T Consensus 20 v~Y~C~~Cg~~~~l~~~~~iRC~~CG~ 46 (63)
T 3h0g_L 20 MIYLCADCGARNTIQAKEVIRCRECGH 46 (63)
T ss_dssp CCCBCSSSCCBCCCCSSSCCCCSSSCC
T ss_pred eEEECCCCCCeeecCCCCceECCCCCc
Confidence 3467999999988543 3466777764
No 238
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=47.67 E-value=6.5 Score=26.00 Aligned_cols=23 Identities=39% Similarity=0.944 Sum_probs=12.7
Q ss_pred cccccccccc--ccccccccccccceE
Q 022481 13 RCDVCKCSFN--TFRRRHHCRCCGRTL 37 (296)
Q Consensus 13 ~C~~C~~~f~--~~~r~hhCr~Cg~~~ 37 (296)
.|. |+.-+- ...+.|.|. ||..+
T Consensus 6 ~C~-C~~~~~~~~~~kT~~C~-CG~~~ 30 (71)
T 1gh9_A 6 RCD-CGRALYSREGAKTRKCV-CGRTV 30 (71)
T ss_dssp EET-TSCCEEEETTCSEEEET-TTEEE
T ss_pred ECC-CCCEEEEcCCCcEEECC-CCCee
Confidence 466 665432 234566666 66665
No 239
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=47.12 E-value=4.6 Score=26.21 Aligned_cols=11 Identities=36% Similarity=0.881 Sum_probs=7.4
Q ss_pred ccccc--cccccc
Q 022481 12 TRCDV--CKCSFN 22 (296)
Q Consensus 12 ~~C~~--C~~~f~ 22 (296)
-.|.. |++.|.
T Consensus 8 ~~C~~~~C~~~f~ 20 (79)
T 2dlk_A 8 MPCDFPGCGRIFS 20 (79)
T ss_dssp EECSSTTTCCEES
T ss_pred ccCCCCCCcCccC
Confidence 45664 888886
No 240
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=46.85 E-value=7.3 Score=18.95 Aligned_cols=12 Identities=17% Similarity=0.567 Sum_probs=7.8
Q ss_pred cccccccccceE
Q 022481 26 RRHHCRCCGRTL 37 (296)
Q Consensus 26 r~hhCr~Cg~~~ 37 (296)
|.+.|..||+.|
T Consensus 2 k~~~C~~C~k~f 13 (27)
T 2kvh_A 2 KPFSCSLCPQRS 13 (27)
T ss_dssp CCEECSSSSCEE
T ss_pred cCccCCCcChhh
Confidence 345677777766
No 241
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=46.58 E-value=6.1 Score=28.09 Aligned_cols=27 Identities=19% Similarity=0.495 Sum_probs=18.1
Q ss_pred cccccccccccccc---------------ccccccccccceE
Q 022481 11 ATRCDVCKCSFNTF---------------RRRHHCRCCGRTL 37 (296)
Q Consensus 11 ~~~C~~C~~~f~~~---------------~r~hhCr~Cg~~~ 37 (296)
.-.|..|++.|... .+.+.|..||+.|
T Consensus 35 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f 76 (124)
T 2dlq_A 35 PFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETF 76 (124)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEE
T ss_pred CeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCcc
Confidence 45789999988521 1345677777776
No 242
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=46.53 E-value=6.1 Score=26.27 Aligned_cols=29 Identities=21% Similarity=0.542 Sum_probs=15.2
Q ss_pred cccccccccc-cc-ccccccccccccceEcC
Q 022481 11 ATRCDVCKCS-FN-TFRRRHHCRCCGRTLCH 39 (296)
Q Consensus 11 ~~~C~~C~~~-f~-~~~r~hhCr~Cg~~~C~ 39 (296)
...|..|++. +. .-....+|+.||..|=.
T Consensus 27 ky~C~fCgk~~vkR~a~GIW~C~~C~~~~AG 57 (73)
T 1ffk_W 27 KYKCPVCGFPKLKRASTSIWVCGHCGYKIAG 57 (73)
T ss_pred CccCCCCCCceeEEEEeEEEECCCCCcEEEC
Confidence 3467777652 11 11234667777776643
No 243
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=46.19 E-value=6.2 Score=27.20 Aligned_cols=57 Identities=16% Similarity=0.345 Sum_probs=37.7
Q ss_pred CCccccccccccccccccc---cccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhccc
Q 022481 7 AFQEATRCDVCKCSFNTFR---RRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRT 70 (296)
Q Consensus 7 ~~~~~~~C~~C~~~f~~~~---r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~ 70 (296)
.......|.+|+-..++.. --.-|..|++-+|..|..+.. ..-...|.+|...+.+.
T Consensus 12 ~~~~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYEr-------keG~q~CpqCktrYkr~ 71 (93)
T 1weo_A 12 KNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYER-------REGTQNCPQCKTRYKRL 71 (93)
T ss_dssp SCCSSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHH-------HTSCSSCTTTCCCCCCC
T ss_pred cccCCCccccccCccccCCCCCEEEeeeccCChhhHHHHHHHH-------hccCccccccCCccccc
Confidence 3345689999999876432 235688888888888764432 23456788887776544
No 244
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=45.75 E-value=5.7 Score=28.21 Aligned_cols=26 Identities=15% Similarity=0.512 Sum_probs=14.9
Q ss_pred cccccccccccccc----cccccccccceEcC
Q 022481 12 TRCDVCKCSFNTFR----RRHHCRCCGRTLCH 39 (296)
Q Consensus 12 ~~C~~C~~~f~~~~----r~hhCr~Cg~~~C~ 39 (296)
..|..|++. .++ ...||+.||..|-.
T Consensus 37 y~CpfCgk~--~vKR~a~GIW~C~kCg~~~AG 66 (103)
T 4a17_Y 37 YGCPFCGKV--AVKRAAVGIWKCKPCKKIIAG 66 (103)
T ss_dssp EECTTTCCE--EEEEEETTEEEETTTTEEEEC
T ss_pred CCCCCCCCc--eeeecCcceEEcCCCCCEEeC
Confidence 457777653 122 24577777777644
No 245
>2ayj_A 50S ribosomal protein L40E; Zn-binding, beta-strand protein, structural genomics, PSI, protein structure initiative; NMR {Sulfolobus solfataricus} SCOP: g.41.8.7
Probab=45.41 E-value=13 Score=23.24 Aligned_cols=23 Identities=26% Similarity=0.512 Sum_probs=14.0
Q ss_pred ccccccccccccccccccccccccc
Q 022481 10 EATRCDVCKCSFNTFRRRHHCRCCG 34 (296)
Q Consensus 10 ~~~~C~~C~~~f~~~~r~hhCr~Cg 34 (296)
+...|+.|..... -|-..||.||
T Consensus 18 ~k~ICrkC~ARnp--~~A~~CRKCg 40 (56)
T 2ayj_A 18 LKKVCRKCGALNP--IRATKCRRCH 40 (56)
T ss_dssp CCEEETTTCCEEC--TTCSSCTTTC
T ss_pred chhhhccccCcCC--cccccccCCC
Confidence 3456777766443 3466777766
No 246
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.36 E-value=5.5 Score=25.05 Aligned_cols=11 Identities=27% Similarity=0.706 Sum_probs=8.3
Q ss_pred ccccccccccc
Q 022481 12 TRCDVCKCSFN 22 (296)
Q Consensus 12 ~~C~~C~~~f~ 22 (296)
-.|..|++.|.
T Consensus 11 ~~C~~C~k~f~ 21 (66)
T 2eod_A 11 QPCTYCTKEFV 21 (66)
T ss_dssp EECSSSCCEEE
T ss_pred eeccccCCccC
Confidence 46778888886
No 247
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.12 E-value=5.2 Score=25.98 Aligned_cols=46 Identities=20% Similarity=0.387 Sum_probs=31.0
Q ss_pred ccccccccccccccccccccccccccce-EcCCCCCCceecCCCCCCCceeccccchhhhccc
Q 022481 9 QEATRCDVCKCSFNTFRRRHHCRCCGRT-LCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRT 70 (296)
Q Consensus 9 ~~~~~C~~C~~~f~~~~r~hhCr~Cg~~-~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~ 70 (296)
.+...|.+|...+. ..---.||++ ||..|... .+.|-.|...+...
T Consensus 13 ~~~~~C~IC~~~~~----~~v~~pCgH~~~C~~C~~~------------~~~CP~CR~~i~~~ 59 (68)
T 2ea5_A 13 ENSKDCVVCQNGTV----NWVLLPCRHTCLCDGCVKY------------FQQCPMCRQFVQES 59 (68)
T ss_dssp CCSSCCSSSSSSCC----CCEETTTTBCCSCTTHHHH------------CSSCTTTCCCCCCE
T ss_pred CCCCCCCCcCcCCC----CEEEECCCChhhhHHHHhc------------CCCCCCCCcchhce
Confidence 34678999987654 2233578888 99999751 36777777766544
No 248
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=44.07 E-value=5.6 Score=28.84 Aligned_cols=48 Identities=13% Similarity=0.259 Sum_probs=31.0
Q ss_pred cccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhc
Q 022481 10 EATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 68 (296)
Q Consensus 10 ~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 68 (296)
+.-.|.+|...|.-- .. -.||.+||..|...++.. ....|..|...+.
T Consensus 17 ~~~~C~IC~~~~~~p---~~-~~CgH~fC~~Ci~~~~~~-------~~~~CP~Cr~~~~ 64 (118)
T 3hct_A 17 SKYECPICLMALREA---VQ-TPCGHRFCKACIIKSIRD-------AGHKCPVDNEILL 64 (118)
T ss_dssp GGGBCTTTCSBCSSE---EE-CTTSCEEEHHHHHHHHHH-------HCSBCTTTCCBCC
T ss_pred CCCCCCcCChhhcCe---EE-CCcCChhhHHHHHHHHhh-------CCCCCCCCCCCcC
Confidence 456899999877632 12 269999999997654321 1126777765543
No 249
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=43.32 E-value=8.8 Score=18.72 Aligned_cols=11 Identities=27% Similarity=0.926 Sum_probs=7.6
Q ss_pred ccccccccceE
Q 022481 27 RHHCRCCGRTL 37 (296)
Q Consensus 27 ~hhCr~Cg~~~ 37 (296)
.+.|..||+.|
T Consensus 3 ~~~C~~C~k~f 13 (28)
T 2kvf_A 3 PYSCSVCGKRF 13 (28)
T ss_dssp SEECSSSCCEE
T ss_pred CccCCCCCccc
Confidence 45677777776
No 250
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=43.16 E-value=12 Score=33.35 Aligned_cols=20 Identities=25% Similarity=0.620 Sum_probs=17.3
Q ss_pred CCCCCCcccccccccccccc
Q 022481 3 IEPPAFQEATRCDVCKCSFN 22 (296)
Q Consensus 3 ~~w~~~~~~~~C~~C~~~f~ 22 (296)
..|.++.....|+.|++.|.
T Consensus 349 f~~~~~~~~t~C~~C~~~~~ 368 (406)
T 2vrw_B 349 FQMFSFEETTSCKACQMLLR 368 (406)
T ss_dssp EEEECCSSCCBCTTTCCBCC
T ss_pred CccccCCCCCCCccccchhc
Confidence 45788889999999999994
No 251
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=42.81 E-value=54 Score=29.38 Aligned_cols=48 Identities=35% Similarity=0.505 Sum_probs=38.3
Q ss_pred HHHcCCHHHHHHHHHcCCCCccc------------C--CCCCcHHHHHHHcCCHHHHHHHHH
Q 022481 205 AIKNGDAAAVKKLLSEGVDANFC------------D--KQGMSLLHLAALFNRTDIAFILME 252 (296)
Q Consensus 205 A~~~g~~~~v~~Ll~~gadvn~~------------d--~~g~TpLh~A~~~g~~~iv~~LL~ 252 (296)
.+..|+...|+.-|..|.|++.+ + .-|.|.+|+|+++.+.+++..|+.
T Consensus 29 gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 29 GVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 45569999999998888776543 1 358899999999999999988886
No 252
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=42.55 E-value=6.9 Score=27.25 Aligned_cols=29 Identities=17% Similarity=0.588 Sum_probs=19.6
Q ss_pred cccccccccccccccc----------cccccccccceEc
Q 022481 10 EATRCDVCKCSFNTFR----------RRHHCRCCGRTLC 38 (296)
Q Consensus 10 ~~~~C~~C~~~f~~~~----------r~hhCr~Cg~~~C 38 (296)
..-.|..|++.|.... +.+.|..||+.|-
T Consensus 15 ~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~C~~C~~~f~ 53 (107)
T 1wjp_A 15 EVYQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFF 53 (107)
T ss_dssp CCCBCTTTCCBCSSHHHHHHHHHHHHHSBCCTTTCCCBS
T ss_pred cCeECCCCCCccCCHHHHHHHHHHCCCCccCCCCCCccC
Confidence 4568999999997321 3356777777663
No 253
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=42.43 E-value=4.6 Score=29.53 Aligned_cols=51 Identities=20% Similarity=0.550 Sum_probs=30.1
Q ss_pred ccccccccccccccc---ccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhc
Q 022481 10 EATRCDVCKCSFNTF---RRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 68 (296)
Q Consensus 10 ~~~~C~~C~~~f~~~---~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 68 (296)
+...|.+|...|.-. .+....-.||.+||..|...+.. ..+.|..|...+.
T Consensus 71 ~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~--------~~~~CP~Cr~~~~ 124 (133)
T 4ap4_A 71 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK--------NANTCPTCRKKIN 124 (133)
T ss_dssp SSCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHH--------HCSBCTTTCCBCC
T ss_pred CCCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHHH--------cCCCCCCCCCcCC
Confidence 345566666655532 12224557899999999765432 2346777766554
No 254
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=42.21 E-value=8.1 Score=24.12 Aligned_cols=14 Identities=29% Similarity=0.686 Sum_probs=11.6
Q ss_pred cccccccccceEcC
Q 022481 26 RRHHCRCCGRTLCH 39 (296)
Q Consensus 26 r~hhCr~Cg~~~C~ 39 (296)
+++.|+.||.|+-.
T Consensus 2 ~~y~C~~CGyvYd~ 15 (55)
T 2v3b_B 2 RKWQCVVCGFIYDE 15 (55)
T ss_dssp CEEEETTTCCEEET
T ss_pred CcEEeCCCCeEECC
Confidence 47899999999854
No 255
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=42.13 E-value=9.3 Score=18.77 Aligned_cols=13 Identities=31% Similarity=0.971 Sum_probs=8.6
Q ss_pred cccccccccceEc
Q 022481 26 RRHHCRCCGRTLC 38 (296)
Q Consensus 26 r~hhCr~Cg~~~C 38 (296)
+.+.|..||+.|-
T Consensus 2 k~~~C~~C~~~f~ 14 (30)
T 2m0d_A 2 KPYQCDYCGRSFS 14 (30)
T ss_dssp CCEECTTTCCEES
T ss_pred cCccCCCCCcccC
Confidence 3466777777763
No 256
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=41.93 E-value=8.8 Score=18.75 Aligned_cols=11 Identities=18% Similarity=0.422 Sum_probs=7.5
Q ss_pred ccccccccceE
Q 022481 27 RHHCRCCGRTL 37 (296)
Q Consensus 27 ~hhCr~Cg~~~ 37 (296)
.+.|..||+.|
T Consensus 3 ~~~C~~C~k~f 13 (27)
T 2kvg_A 3 PYRCPLCRAGC 13 (27)
T ss_dssp TEEETTTTEEE
T ss_pred CcCCCCCCccc
Confidence 45677777766
No 257
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=41.87 E-value=4 Score=29.92 Aligned_cols=55 Identities=13% Similarity=0.190 Sum_probs=3.6
Q ss_pred CCCCcccccccccccccccccc----------cccc----ccccceEcCCCCCCceecCCCCCCCceeccccchhhh
Q 022481 5 PPAFQEATRCDVCKCSFNTFRR----------RHHC----RCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSS 67 (296)
Q Consensus 5 w~~~~~~~~C~~C~~~f~~~~r----------~hhC----r~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~ 67 (296)
|.-+.+...|.+|...|...-- ...| -.||.+|+..|...++.. ..+|..|....
T Consensus 42 w~wd~~~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~--------~~~CP~Cr~~~ 110 (117)
T 4a0k_B 42 WAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT--------RQVCPLDNREW 110 (117)
T ss_dssp EEECCCC----------------------------------------------------------------------
T ss_pred EeecCCCCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHc--------CCcCCCCCCee
Confidence 4445566899999999864210 1112 269999999998776432 35687776653
No 258
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=41.44 E-value=9.1 Score=23.81 Aligned_cols=14 Identities=21% Similarity=0.610 Sum_probs=11.7
Q ss_pred cccccccccceEcC
Q 022481 26 RRHHCRCCGRTLCH 39 (296)
Q Consensus 26 r~hhCr~Cg~~~C~ 39 (296)
+++.|+.||.|+-.
T Consensus 2 ~~y~C~vCGyvYd~ 15 (54)
T 4rxn_A 2 KKYTCTVCGYIYDP 15 (54)
T ss_dssp CCEEETTTCCEECT
T ss_pred CceECCCCCeEECC
Confidence 57899999999854
No 259
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=41.42 E-value=9.2 Score=28.83 Aligned_cols=22 Identities=27% Similarity=0.273 Sum_probs=15.2
Q ss_pred CccccccCCceeeecCCCCCCC
Q 022481 113 SVLECKCGMPLCICEAPAPAAS 134 (296)
Q Consensus 113 ~~~~~~~~~p~c~~~~P~p~~~ 134 (296)
...-|.-||-|-|-..+...++
T Consensus 92 ~~gHC~~GmKl~I~V~~~~~~~ 113 (138)
T 1jer_A 92 VGTHCSNGQKLSINVVAANATV 113 (138)
T ss_dssp STTTGGGTCEEEEEEECCC---
T ss_pred CCCccccCCEEEEEEcCCCCCC
Confidence 3578999999988876665443
No 260
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=41.05 E-value=10 Score=18.58 Aligned_cols=12 Identities=17% Similarity=0.636 Sum_probs=7.8
Q ss_pred ccccccccceEc
Q 022481 27 RHHCRCCGRTLC 38 (296)
Q Consensus 27 ~hhCr~Cg~~~C 38 (296)
.+.|..||+.|-
T Consensus 2 ~~~C~~C~k~f~ 13 (29)
T 1rik_A 2 KFACPECPKRFM 13 (29)
T ss_dssp CEECSSSSCEES
T ss_pred CccCCCCCchhC
Confidence 356777777763
No 261
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=40.90 E-value=8.6 Score=25.20 Aligned_cols=13 Identities=23% Similarity=0.692 Sum_probs=9.8
Q ss_pred ccccccccccccc
Q 022481 10 EATRCDVCKCSFN 22 (296)
Q Consensus 10 ~~~~C~~C~~~f~ 22 (296)
..-.|..|++.|.
T Consensus 14 k~~~C~~C~~~f~ 26 (86)
T 1x6h_A 14 KPYACSHCDKTFR 26 (86)
T ss_dssp CCEECSSSSCEES
T ss_pred CCCcCCCCCCccC
Confidence 3457888888886
No 262
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=40.90 E-value=7.7 Score=27.44 Aligned_cols=31 Identities=13% Similarity=0.284 Sum_probs=20.0
Q ss_pred cccccccccccccccc---c-------------cccccccccceEcC
Q 022481 9 QEATRCDVCKCSFNTF---R-------------RRHHCRCCGRTLCH 39 (296)
Q Consensus 9 ~~~~~C~~C~~~f~~~---~-------------r~hhCr~Cg~~~C~ 39 (296)
+..-.|..|++.|... . +.+.|..||+.|-.
T Consensus 16 ekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~ 62 (102)
T 2ghf_A 16 EGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKR 62 (102)
T ss_dssp CSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESS
T ss_pred CcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCC
Confidence 3456799999999721 1 12457777777743
No 263
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=40.64 E-value=5.4 Score=27.47 Aligned_cols=16 Identities=25% Similarity=0.615 Sum_probs=13.3
Q ss_pred cccccccccccccccc
Q 022481 10 EATRCDVCKCSFNTFR 25 (296)
Q Consensus 10 ~~~~C~~C~~~f~~~~ 25 (296)
+.-.|..|+++|..+.
T Consensus 20 d~iiClecGK~fK~Lk 35 (87)
T 2jsp_A 20 DHIVCLECGGSFKSLK 35 (87)
T ss_dssp SCEECTBTCCEESBHH
T ss_pred CceEecccchhhHHHH
Confidence 3458999999999887
No 264
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=40.12 E-value=8 Score=18.94 Aligned_cols=10 Identities=30% Similarity=0.916 Sum_probs=5.8
Q ss_pred cccccccceE
Q 022481 28 HHCRCCGRTL 37 (296)
Q Consensus 28 hhCr~Cg~~~ 37 (296)
+.|..||+.|
T Consensus 3 ~~C~~C~~~f 12 (29)
T 1ard_A 3 FVCEVCTRAF 12 (29)
T ss_dssp CBCTTTCCBC
T ss_pred eECCCCCccc
Confidence 4566666554
No 265
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=46.19 E-value=6 Score=19.06 Aligned_cols=12 Identities=25% Similarity=0.755 Sum_probs=7.4
Q ss_pred ccccccccceEc
Q 022481 27 RHHCRCCGRTLC 38 (296)
Q Consensus 27 ~hhCr~Cg~~~C 38 (296)
.+.|..||+.|-
T Consensus 2 p~~C~~C~k~f~ 13 (26)
T 2lvu_A 2 PYVCERCGKRFV 13 (26)
Confidence 355677776663
No 266
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=39.94 E-value=7.1 Score=24.07 Aligned_cols=13 Identities=23% Similarity=0.447 Sum_probs=10.9
Q ss_pred cccccccccceEc
Q 022481 26 RRHHCRCCGRTLC 38 (296)
Q Consensus 26 r~hhCr~Cg~~~C 38 (296)
+++.|+.||.|+-
T Consensus 2 ~~y~C~~CGyvYd 14 (52)
T 1e8j_A 2 DIYVCTVCGYEYD 14 (52)
T ss_dssp CCEECSSSCCCCC
T ss_pred CcEEeCCCCeEEc
Confidence 4788999999975
No 267
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=39.84 E-value=12 Score=26.67 Aligned_cols=33 Identities=21% Similarity=0.544 Sum_probs=21.2
Q ss_pred ccccccccccc-cccccccccccccceEcCCCCCCceecCCC
Q 022481 11 ATRCDVCKCSF-NTFRRRHHCRCCGRTLCHEHSSDQMTLPQF 51 (296)
Q Consensus 11 ~~~C~~C~~~f-~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~ 51 (296)
...|..|+-.| .-+.+... |..|-+.++..|.|
T Consensus 67 p~~C~~CG~~F~~~~~kPsr--------CP~CkSe~Ie~P~F 100 (105)
T 2gmg_A 67 PAQCRKCGFVFKAEINIPSR--------CPKCKSEWIEEPRF 100 (105)
T ss_dssp CCBBTTTCCBCCCCSSCCSS--------CSSSCCCCBCCCCE
T ss_pred CcChhhCcCeecccCCCCCC--------CcCCCCCccCCcce
Confidence 35799999999 23445444 45555666666655
No 268
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=39.75 E-value=5.3 Score=30.51 Aligned_cols=48 Identities=15% Similarity=0.314 Sum_probs=32.3
Q ss_pred cccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhccc
Q 022481 12 TRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRT 70 (296)
Q Consensus 12 ~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~ 70 (296)
-.|.+|...|.--.. -.||.+||..|...+... ....|..|...+...
T Consensus 79 ~~C~IC~~~~~~pv~----~~CgH~fC~~Ci~~~~~~-------~~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 79 FMCVCCQELVYQPVT----TECFHNVCKDCLQRSFKA-------QVFSCPACRHDLGQN 126 (150)
T ss_dssp TBCTTTSSBCSSEEE----CTTSCEEEHHHHHHHHHT-------TCCBCTTTCCBCCTT
T ss_pred CEeecCChhhcCCEE----cCCCCchhHHHHHHHHHh-------CCCcCCCCCccCCCC
Confidence 479999887752211 479999999997655431 234688887766543
No 269
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=39.73 E-value=11 Score=18.36 Aligned_cols=11 Identities=36% Similarity=1.023 Sum_probs=6.8
Q ss_pred ccccccccceE
Q 022481 27 RHHCRCCGRTL 37 (296)
Q Consensus 27 ~hhCr~Cg~~~ 37 (296)
.+.|..||+.|
T Consensus 2 ~~~C~~C~k~f 12 (29)
T 2m0f_A 2 PLKCRECGKQF 12 (29)
T ss_dssp CEECTTTSCEE
T ss_pred CccCCCCCCcc
Confidence 34566677666
No 270
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.52 E-value=7.9 Score=25.42 Aligned_cols=32 Identities=22% Similarity=0.682 Sum_probs=19.9
Q ss_pred ccccccccccccccc-cccccccccc--eEcCCCCC
Q 022481 11 ATRCDVCKCSFNTFR-RRHHCRCCGR--TLCHEHSS 43 (296)
Q Consensus 11 ~~~C~~C~~~f~~~~-r~hhCr~Cg~--~~C~~c~~ 43 (296)
...|..|++.|.... .+|. ..||. +.|..|..
T Consensus 17 ~~~C~~C~~~~~~~~L~~H~-~~c~~~~~~C~~C~~ 51 (75)
T 2d9k_A 17 LAVCQHCDLELSILKLKEHE-DYCGARTELCGNCGR 51 (75)
T ss_dssp CEECSSSCCEECHHHHHHHH-HHHHHCEEECSSSCC
T ss_pred ccCCcccChHhhHHHHHHHH-hHcCCCceEcccCCC
Confidence 356888999887433 3444 56654 35777654
No 271
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=39.42 E-value=8.7 Score=27.71 Aligned_cols=12 Identities=17% Similarity=0.440 Sum_probs=7.1
Q ss_pred cccccccccceE
Q 022481 26 RRHHCRCCGRTL 37 (296)
Q Consensus 26 r~hhCr~Cg~~~ 37 (296)
|.+.|..||+.|
T Consensus 73 ~~~~C~~C~k~f 84 (129)
T 2wbt_A 73 SQFVCPLCLMPF 84 (129)
T ss_dssp CSEECTTTCCEE
T ss_pred CCeECCCCCccc
Confidence 345566666666
No 272
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=38.63 E-value=12 Score=23.75 Aligned_cols=31 Identities=19% Similarity=0.291 Sum_probs=20.9
Q ss_pred ccccccccccccccccccccccccceEcCCC
Q 022481 11 ATRCDVCKCSFNTFRRRHHCRCCGRTLCHEH 41 (296)
Q Consensus 11 ~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c 41 (296)
...|..|++...+-+.-..|+.|+.++=..|
T Consensus 19 ~~~C~~Cg~~i~~gkq~~kC~dC~~~cH~~C 49 (61)
T 4b6d_A 19 PESCVPCGKRIKFGKLSLKCRDCRVVSHPEC 49 (61)
T ss_dssp CEECTTTCCEECTTCEEEEESSSSCEECGGG
T ss_pred CcccccccCEEEEeeEeeECCCCCCeEchhH
Confidence 4678888776664456688888876653444
No 273
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=38.29 E-value=15 Score=23.21 Aligned_cols=28 Identities=25% Similarity=0.630 Sum_probs=20.8
Q ss_pred ccccccccccc--cccccccccccccccceEcC
Q 022481 9 QEATRCDVCKC--SFNTFRRRHHCRCCGRTLCH 39 (296)
Q Consensus 9 ~~~~~C~~C~~--~f~~~~r~hhCr~Cg~~~C~ 39 (296)
..+..|.+|.. .+. -|+.|..||.-+|+
T Consensus 9 ~~~~~C~vC~~~~~~~---akY~CPrC~~rYCS 38 (59)
T 1x4s_A 9 EPAGPCGFCPAGEVQP---ARYTCPRCNAPYCS 38 (59)
T ss_dssp CCCEEECSSCTTCCEE---ECEECTTTCCEESS
T ss_pred CCCCcCcCCCCCcCCC---ccccCcCCCCCccC
Confidence 34568999985 222 27899999999987
No 274
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=37.72 E-value=9.7 Score=18.28 Aligned_cols=11 Identities=36% Similarity=1.014 Sum_probs=8.6
Q ss_pred ccccccccccc
Q 022481 13 RCDVCKCSFNT 23 (296)
Q Consensus 13 ~C~~C~~~f~~ 23 (296)
.|..|++.|..
T Consensus 3 ~C~~C~k~f~~ 13 (27)
T 1znf_A 3 KCGLCERSFVE 13 (27)
T ss_dssp BCSSSCCBCSS
T ss_pred cCCCCCCcCCC
Confidence 58889988873
No 275
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=36.97 E-value=9.2 Score=20.85 Aligned_cols=13 Identities=31% Similarity=0.899 Sum_probs=8.8
Q ss_pred ccccccccccceE
Q 022481 25 RRRHHCRCCGRTL 37 (296)
Q Consensus 25 ~r~hhCr~Cg~~~ 37 (296)
.-|.|||.|-+-+
T Consensus 7 kikqhcrfckkky 19 (37)
T 2elu_A 7 GIKQHCRFCKKKY 19 (37)
T ss_dssp CCCCEETTTTEEC
T ss_pred HHHHHHHHHHHHH
Confidence 3478999886543
No 276
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=36.93 E-value=7.2 Score=29.41 Aligned_cols=47 Identities=17% Similarity=0.485 Sum_probs=32.5
Q ss_pred cccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhh
Q 022481 10 EATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSS 67 (296)
Q Consensus 10 ~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~ 67 (296)
+.-.|.+|...|.-- .. -.||.+||..|...+.. .....|-.|...+
T Consensus 30 ~~~~C~IC~~~~~~p---v~-~~CgH~FC~~Ci~~~~~-------~~~~~CP~Cr~~~ 76 (141)
T 3knv_A 30 AKYLCSACRNVLRRP---FQ-AQCGHRYCSFCLASILS-------SGPQNCAACVHEG 76 (141)
T ss_dssp GGGBCTTTCSBCSSE---EE-CTTSCEEEHHHHHHHGG-------GSCEECHHHHHTT
T ss_pred cCcCCCCCChhhcCc---EE-CCCCCccCHHHHHHHHh-------cCCCCCCCCCCcc
Confidence 445799998877532 12 37999999999866532 2235788888765
No 277
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.91 E-value=12 Score=25.08 Aligned_cols=19 Identities=16% Similarity=0.093 Sum_probs=12.2
Q ss_pred CCCCC-cccccccccccccc
Q 022481 4 EPPAF-QEATRCDVCKCSFN 22 (296)
Q Consensus 4 ~w~~~-~~~~~C~~C~~~f~ 22 (296)
.|... .....|..|++.|.
T Consensus 17 ~~~~~~~~~~~C~~C~k~f~ 36 (95)
T 2ej4_A 17 KWIDEAQLSRPKKSCDRTFS 36 (95)
T ss_dssp CCCCSSCSSSSCCCCCCCCS
T ss_pred EeecCCcCCCcccccccccC
Confidence 45432 23356889999987
No 278
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=36.81 E-value=19 Score=22.54 Aligned_cols=9 Identities=22% Similarity=0.604 Sum_probs=3.9
Q ss_pred eeccccchh
Q 022481 57 VRVCADCFN 65 (296)
Q Consensus 57 ~rvC~~C~~ 65 (296)
..||..|=-
T Consensus 30 e~vC~~CGl 38 (58)
T 1dl6_A 30 DMICPECGL 38 (58)
T ss_dssp CEECTTTCC
T ss_pred eEEeCCCCC
Confidence 344444433
No 279
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.74 E-value=12 Score=19.63 Aligned_cols=14 Identities=14% Similarity=0.574 Sum_probs=10.1
Q ss_pred ccccccccccceEc
Q 022481 25 RRRHHCRCCGRTLC 38 (296)
Q Consensus 25 ~r~hhCr~Cg~~~C 38 (296)
.+.+.|..||+.|-
T Consensus 7 ~k~~~C~~C~k~f~ 20 (36)
T 2els_A 7 GKIFTCEYCNKVFK 20 (36)
T ss_dssp CCCEECTTTCCEES
T ss_pred CCCEECCCCCceeC
Confidence 35677888888874
No 280
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=36.64 E-value=11 Score=20.46 Aligned_cols=20 Identities=45% Similarity=1.187 Sum_probs=13.6
Q ss_pred cccccccccccccccccccccc
Q 022481 14 CDVCKCSFNTFRRRHHCRCCGR 35 (296)
Q Consensus 14 C~~C~~~f~~~~r~hhCr~Cg~ 35 (296)
|..| .+.-|.||..|..||.
T Consensus 8 C~~C--~~~Nfa~r~~C~~C~~ 27 (32)
T 2lk0_A 8 CNKC--CLNNFRKRLKCFRCGA 27 (32)
T ss_dssp CTTT--CCEEETTCCBCTTTCC
T ss_pred cCcC--cCCcChhcceecCCCC
Confidence 4444 3456778888888874
No 281
>4hc9_A Trans-acting T-cell-specific transcription factor; zinc finger, GATA transcription factor, DNA bridging, transc DNA complex; HET: DNA; 1.60A {Homo sapiens} PDB: 4hc7_A* 4hca_A* 3dfx_A* 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A* 1gnf_A 1y0j_A 2l6y_A 2l6z_A
Probab=36.41 E-value=12 Score=27.23 Aligned_cols=37 Identities=19% Similarity=0.177 Sum_probs=22.1
Q ss_pred eEcCCCCCCceecCCCCCCCceeccccchhhhcccCCC
Q 022481 36 TLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRTGKD 73 (296)
Q Consensus 36 ~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~~~~ 73 (296)
.+|..|.....++-..+... .-+|..|.-.+......
T Consensus 60 ~~C~~C~t~~tp~WRr~~~g-~~lCNaCgl~~~~~~~~ 96 (115)
T 4hc9_A 60 TSCANCQTTTTTLWRRNANG-DPVCNACGLYYKLHNIN 96 (115)
T ss_dssp CCCTTTCCSCCSSCEECTTS-CEECHHHHHHHHHHSSC
T ss_pred ccCCCcCCCCcceeEECCCC-CCcchHHHHHHHHhCCC
Confidence 46777766555554444333 56888887776555433
No 282
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=35.91 E-value=11 Score=18.21 Aligned_cols=10 Identities=30% Similarity=1.075 Sum_probs=5.0
Q ss_pred cccccccceE
Q 022481 28 HHCRCCGRTL 37 (296)
Q Consensus 28 hhCr~Cg~~~ 37 (296)
+.|..||+.|
T Consensus 3 ~~C~~C~~~f 12 (29)
T 2m0e_A 3 HKCPHCDKKF 12 (29)
T ss_dssp CCCSSCCCCC
T ss_pred CcCCCCCccc
Confidence 3455555544
No 283
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=34.85 E-value=3.9 Score=27.01 Aligned_cols=43 Identities=16% Similarity=0.427 Sum_probs=28.9
Q ss_pred ccccccccccccccccccccccccce-EcCCCCCCceecCCCCCCCceeccccchhhhcc
Q 022481 11 ATRCDVCKCSFNTFRRRHHCRCCGRT-LCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSR 69 (296)
Q Consensus 11 ~~~C~~C~~~f~~~~r~hhCr~Cg~~-~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~ 69 (296)
...|.+|...|.-. ---.||+. ||..|.... +.|..|...+..
T Consensus 24 ~~~C~iC~~~~~~~----~~~pCgH~~~C~~C~~~~------------~~CP~Cr~~i~~ 67 (74)
T 4ic3_A 24 EKLCKICMDRNIAI----VFVPCGHLVTCKQCAEAV------------DKCPMCYTVITF 67 (74)
T ss_dssp HTBCTTTSSSBCCE----EEETTCCBCCCHHHHTTC------------SBCTTTCCBCSE
T ss_pred CCCCCCCCCCCCCE----EEcCCCChhHHHHhhhcC------------ccCCCcCcCccC
Confidence 35799998876521 22379999 999997543 667777665543
No 284
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=34.75 E-value=12 Score=28.24 Aligned_cols=12 Identities=25% Similarity=0.600 Sum_probs=8.7
Q ss_pred cccccccccceE
Q 022481 26 RRHHCRCCGRTL 37 (296)
Q Consensus 26 r~hhCr~Cg~~~ 37 (296)
-+..|+.||+.|
T Consensus 69 ~~~~C~~CG~~~ 80 (139)
T 3a43_A 69 AVFKCRNCNYEW 80 (139)
T ss_dssp CEEEETTTCCEE
T ss_pred CcEECCCCCCEE
Confidence 467788887776
No 285
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=34.23 E-value=8.9 Score=26.40 Aligned_cols=55 Identities=16% Similarity=0.390 Sum_probs=31.3
Q ss_pred cccccccccccccccccccccccccceEcCCCCCCceecC-CCCCCCceecccc--chhh
Q 022481 10 EATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLP-QFGIHTNVRVCAD--CFNS 66 (296)
Q Consensus 10 ~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~-~~~~~~~~rvC~~--C~~~ 66 (296)
+...|.+|-..|..-. -..-..||+.||..|....+... ..|. ...-.|.. |...
T Consensus 4 ~~~~C~IC~~~~~~~~-~~~l~~CgH~FC~~Cl~~~~~~~i~~g~-~~~i~CP~~~C~~~ 61 (94)
T 1wim_A 4 GSSGCKLCLGEYPVEQ-MTTIAQCQCIFCTLCLKQYVELLIKEGL-ETAISCPDAACPKQ 61 (94)
T ss_dssp SBCCCSSSCCCCBGGG-EEEETTTTEEEEHHHHHHHHHHHHHHCS-CCCEECSCTTCSSC
T ss_pred CCcCCcccCccccccc-ceEcCCCCCcccHHHHHHHHHHHhhcCC-cccccCccccCCCC
Confidence 4457999987765311 11123699999999987654321 1111 12245766 7655
No 286
>3bbo_Y Ribosomal protein L28; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=34.00 E-value=62 Score=24.56 Aligned_cols=60 Identities=7% Similarity=0.013 Sum_probs=34.4
Q ss_pred ccccccccccccccccccc-cccccceEcCCCCCCceecCCCCCCCceeccccchhhhccc
Q 022481 11 ATRCDVCKCSFNTFRRRHH-CRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRT 70 (296)
Q Consensus 11 ~~~C~~C~~~f~~~~r~hh-Cr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~ 70 (296)
+..|.+|++.-.+-+...| =+..-+.|=.+=-..++..+..+....+|||..|...+...
T Consensus 75 sR~C~itGK~p~~GNnVSHS~~KTKRrw~PNLQkvri~~~~g~r~vrlrVsTr~LRTikk~ 135 (151)
T 3bbo_Y 75 RRICPFTGKKSNRANKVSHSNHKTKKLQFVNLQYKRIWWEAGKRYVKLRLSTKAIKTIEKN 135 (151)
T ss_dssp -CCCCCSCCTTCCCCCCEECCSSSCCEECCCCCCCCBCCCTTSSCCCBCCCSSSTTTTTTS
T ss_pred hceeeccCcccccCCeeeecCCccCceeccccEEEEEEECCCCEEEEEEEEchheeehhhh
Confidence 3469999996433322222 13344444444434444444343567899999999988765
No 287
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=33.02 E-value=11 Score=18.40 Aligned_cols=10 Identities=20% Similarity=0.557 Sum_probs=6.0
Q ss_pred cccccccceE
Q 022481 28 HHCRCCGRTL 37 (296)
Q Consensus 28 hhCr~Cg~~~ 37 (296)
+.|..||+.|
T Consensus 3 ~~C~~C~k~f 12 (30)
T 1klr_A 3 YQCQYCEFRS 12 (30)
T ss_dssp CCCSSSSCCC
T ss_pred ccCCCCCCcc
Confidence 4566666655
No 288
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=32.91 E-value=22 Score=19.98 Aligned_cols=13 Identities=23% Similarity=0.595 Sum_probs=8.8
Q ss_pred ccccccccccccc
Q 022481 11 ATRCDVCKCSFNT 23 (296)
Q Consensus 11 ~~~C~~C~~~f~~ 23 (296)
.-.|..|++.|..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2ely_A 12 PFKCVECGKGFSR 24 (46)
T ss_dssp SBCCSSSCCCBSS
T ss_pred CcccCccCcccCC
Confidence 4567777777763
No 289
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=32.87 E-value=15 Score=24.19 Aligned_cols=15 Identities=20% Similarity=0.541 Sum_probs=12.4
Q ss_pred ccccccccccceEcC
Q 022481 25 RRRHHCRCCGRTLCH 39 (296)
Q Consensus 25 ~r~hhCr~Cg~~~C~ 39 (296)
..++.|+.||.|+-.
T Consensus 5 m~~y~C~vCGyiYd~ 19 (70)
T 1dx8_A 5 EGKYECEACGYIYEP 19 (70)
T ss_dssp SSCEEETTTCCEECT
T ss_pred CceEEeCCCCEEEcC
Confidence 358999999999854
No 290
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=32.77 E-value=16 Score=18.85 Aligned_cols=13 Identities=15% Similarity=0.409 Sum_probs=8.9
Q ss_pred cccccccccceEc
Q 022481 26 RRHHCRCCGRTLC 38 (296)
Q Consensus 26 r~hhCr~Cg~~~C 38 (296)
+.+.|..||+.|-
T Consensus 6 k~~~C~~C~k~f~ 18 (35)
T 2elx_A 6 SGYVCALCLKKFV 18 (35)
T ss_dssp CSEECSSSCCEES
T ss_pred CCeECCCCcchhC
Confidence 4567777877763
No 291
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=32.49 E-value=14 Score=32.39 Aligned_cols=43 Identities=23% Similarity=0.458 Sum_probs=30.5
Q ss_pred ccccccccccccccccccccccccce-EcCCCCCCceecCCCCCCCceeccccchhhhcc
Q 022481 11 ATRCDVCKCSFNTFRRRHHCRCCGRT-LCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSR 69 (296)
Q Consensus 11 ~~~C~~C~~~f~~~~r~hhCr~Cg~~-~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~ 69 (296)
...|.+|...|.-. ---.||++ ||..|.... +.|..|...+..
T Consensus 295 ~~~C~IC~~~~~~~----v~lpCgH~~fC~~C~~~~------------~~CP~CR~~i~~ 338 (345)
T 3t6p_A 295 ERTCKVCMDKEVSV----VFIPCGHLVVCQECAPSL------------RKCPICRGIIKG 338 (345)
T ss_dssp TCBCTTTSSSBCCE----EEETTCCEEECTTTGGGC------------SBCTTTCCBCCE
T ss_pred CCCCCccCCcCCce----EEcCCCChhHhHHHHhcC------------CcCCCCCCCccC
Confidence 35799999877522 22379999 999997532 678888776654
No 292
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=38.32 E-value=9.6 Score=18.76 Aligned_cols=12 Identities=25% Similarity=0.847 Sum_probs=7.4
Q ss_pred ccccccccceEc
Q 022481 27 RHHCRCCGRTLC 38 (296)
Q Consensus 27 ~hhCr~Cg~~~C 38 (296)
.+.|..||+.|-
T Consensus 2 ~~~C~~C~k~f~ 13 (29)
T 2lvt_A 2 PCQCVMCGKAFT 13 (29)
Confidence 355777777663
No 293
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=32.00 E-value=8.4 Score=27.66 Aligned_cols=48 Identities=13% Similarity=0.340 Sum_probs=31.7
Q ss_pred ccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhcc
Q 022481 11 ATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSR 69 (296)
Q Consensus 11 ~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~ 69 (296)
...|.+|...|.--. . -.||.+||..|...+... ..+.|..|...+..
T Consensus 23 ~~~C~IC~~~~~~p~---~-~~CgH~fC~~Ci~~~~~~-------~~~~CP~Cr~~~~~ 70 (116)
T 1rmd_A 23 SISCQICEHILADPV---E-TSCKHLFCRICILRCLKV-------MGSYCPSCRYPCFP 70 (116)
T ss_dssp HTBCTTTCSBCSSEE---E-CTTSCEEEHHHHHHHHHH-------TCSBCTTTCCBCCG
T ss_pred CCCCCCCCcHhcCcE---E-cCCCCcccHHHHHHHHhH-------CcCcCCCCCCCCCH
Confidence 457999988775321 1 379999999997654332 12468778766543
No 294
>4a18_A RPL37, ribosomal protein L37; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_A 4a1b_A 4a1d_A
Probab=31.90 E-value=19 Score=24.85 Aligned_cols=7 Identities=57% Similarity=1.682 Sum_probs=4.3
Q ss_pred cccccce
Q 022481 30 CRCCGRT 36 (296)
Q Consensus 30 Cr~Cg~~ 36 (296)
||.||..
T Consensus 19 CrRCG~~ 25 (94)
T 4a18_A 19 CRRCGKA 25 (94)
T ss_dssp CTTTCSE
T ss_pred ecCcCch
Confidence 6666655
No 295
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.88 E-value=14 Score=20.77 Aligned_cols=12 Identities=25% Similarity=0.722 Sum_probs=7.9
Q ss_pred cccccccccccc
Q 022481 11 ATRCDVCKCSFN 22 (296)
Q Consensus 11 ~~~C~~C~~~f~ 22 (296)
.-.|..|++.|.
T Consensus 12 ~~~C~~C~k~F~ 23 (46)
T 2epw_A 12 PCKCTECGKAFC 23 (46)
T ss_dssp SEECSSSCCEES
T ss_pred CeeCCCCCCccC
Confidence 346777777776
No 296
>2kwq_A Protein MCM10 homolog; DNA replication, DNA binding, zinc motif, zinc ribbon binding protein; NMR {Xenopus laevis}
Probab=31.83 E-value=15 Score=25.60 Aligned_cols=9 Identities=33% Similarity=0.966 Sum_probs=4.5
Q ss_pred ccccccccc
Q 022481 11 ATRCDVCKC 19 (296)
Q Consensus 11 ~~~C~~C~~ 19 (296)
+-.|..|..
T Consensus 15 av~C~~C~y 23 (92)
T 2kwq_A 15 VVTCKTCKY 23 (92)
T ss_dssp EEEETTTCC
T ss_pred EEEccCCcc
Confidence 345555553
No 297
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=31.59 E-value=13 Score=18.26 Aligned_cols=10 Identities=30% Similarity=0.839 Sum_probs=6.0
Q ss_pred cccccccceE
Q 022481 28 HHCRCCGRTL 37 (296)
Q Consensus 28 hhCr~Cg~~~ 37 (296)
+.|..||+.|
T Consensus 3 ~~C~~C~k~f 12 (30)
T 1paa_A 3 YACGLCNRAF 12 (30)
T ss_dssp SBCTTTCCBC
T ss_pred cCCcccCccc
Confidence 4566666655
No 298
>3c5k_A HD6, histone deacetylase 6; HDAC6, zinc finger, actin-binding, chromatin regulator, cytoplasm, hydrolase, metal-binding, nucleus, phosphoprotein; 1.55A {Homo sapiens} PDB: 3gv4_A 3phd_A
Probab=31.39 E-value=29 Score=24.90 Aligned_cols=26 Identities=19% Similarity=0.588 Sum_probs=20.1
Q ss_pred ccccccccccccccccccccccccceEcCC
Q 022481 11 ATRCDVCKCSFNTFRRRHHCRCCGRTLCHE 40 (296)
Q Consensus 11 ~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~ 40 (296)
...|..|...=+++ -|-.||.|.|.+
T Consensus 24 ~~~C~~C~~~~~~W----~CL~CG~vgCgr 49 (109)
T 3c5k_A 24 TQPCGDCGTIQENW----VCLSCYQVYCGR 49 (109)
T ss_dssp TCCCTTTCCCSSEE----EETTTCCEEECT
T ss_pred CCcCccccCCCCee----eeeecCccccCC
Confidence 45799998865543 499999999964
No 299
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.63 E-value=18 Score=18.80 Aligned_cols=12 Identities=17% Similarity=0.473 Sum_probs=8.9
Q ss_pred cccccccccceE
Q 022481 26 RRHHCRCCGRTL 37 (296)
Q Consensus 26 r~hhCr~Cg~~~ 37 (296)
+.+.|..||+.|
T Consensus 8 k~~~C~~C~k~f 19 (36)
T 2elt_A 8 KPYKCPQCSYAS 19 (36)
T ss_dssp CSEECSSSSCEE
T ss_pred CCCCCCCCCccc
Confidence 457788888777
No 300
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=30.57 E-value=24 Score=19.31 Aligned_cols=20 Identities=30% Similarity=0.899 Sum_probs=13.4
Q ss_pred cccccccccccccccccccccc
Q 022481 14 CDVCKCSFNTFRRRHHCRCCGR 35 (296)
Q Consensus 14 C~~C~~~f~~~~r~hhCr~Cg~ 35 (296)
|..|+ +.-|.||..|..||.
T Consensus 9 C~~C~--~~Nfa~R~~C~~C~~ 28 (33)
T 2k1p_A 9 CKTCS--NVNWARRSECNMCNT 28 (33)
T ss_dssp CSSSC--CBCCTTCSBCSSSCC
T ss_pred cCCCC--CccccccccccccCC
Confidence 44443 456778888888864
No 301
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.53 E-value=17 Score=20.45 Aligned_cols=13 Identities=31% Similarity=0.682 Sum_probs=9.5
Q ss_pred ccccccccccccc
Q 022481 11 ATRCDVCKCSFNT 23 (296)
Q Consensus 11 ~~~C~~C~~~f~~ 23 (296)
.-.|..|++.|..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2ytt_A 12 PYQCSECGKSFSG 24 (46)
T ss_dssp TTCCSSSCCCCSS
T ss_pred CeeCCCCCcccCC
Confidence 4568888888873
No 302
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.49 E-value=15 Score=20.82 Aligned_cols=13 Identities=23% Similarity=0.611 Sum_probs=9.5
Q ss_pred ccccccccccccc
Q 022481 11 ATRCDVCKCSFNT 23 (296)
Q Consensus 11 ~~~C~~C~~~f~~ 23 (296)
.-.|..|++.|..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2ytm_A 12 PYKCMECGKAFGD 24 (46)
T ss_dssp SSSBTTTTBCCSS
T ss_pred CcCCCCCCchhCC
Confidence 4568888888873
No 303
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=30.41 E-value=16 Score=28.27 Aligned_cols=28 Identities=25% Similarity=0.648 Sum_probs=9.3
Q ss_pred cccccccccccccccc------------cccccccccceE
Q 022481 10 EATRCDVCKCSFNTFR------------RRHHCRCCGRTL 37 (296)
Q Consensus 10 ~~~~C~~C~~~f~~~~------------r~hhCr~Cg~~~ 37 (296)
..-.|..|++.|.... +.+.|..||+.|
T Consensus 20 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f 59 (190)
T 2i13_A 20 KPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSF 59 (190)
T ss_dssp -----------CCSSHHHHHGGGCC---CCEECTTTCCEE
T ss_pred CCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchh
Confidence 3457888988887331 334566666665
No 304
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.41 E-value=15 Score=20.64 Aligned_cols=12 Identities=25% Similarity=0.750 Sum_probs=7.9
Q ss_pred cccccccccccc
Q 022481 11 ATRCDVCKCSFN 22 (296)
Q Consensus 11 ~~~C~~C~~~f~ 22 (296)
.-.|..|++.|.
T Consensus 12 ~~~C~~C~k~f~ 23 (46)
T 2yu8_A 12 PYKCNECGKVFT 23 (46)
T ss_dssp SEECSSSCCEES
T ss_pred CeECCcCCchhC
Confidence 346777777776
No 305
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.39 E-value=14 Score=19.27 Aligned_cols=13 Identities=31% Similarity=0.994 Sum_probs=8.6
Q ss_pred ccccccccccceE
Q 022481 25 RRRHHCRCCGRTL 37 (296)
Q Consensus 25 ~r~hhCr~Cg~~~ 37 (296)
.+.+.|..||+.|
T Consensus 7 ~~~~~C~~C~k~f 19 (36)
T 2elr_A 7 GKTHLCDMCGKKF 19 (36)
T ss_dssp CSSCBCTTTCCBC
T ss_pred CCCeecCcCCCCc
Confidence 3556777777766
No 306
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.35 E-value=18 Score=18.87 Aligned_cols=14 Identities=21% Similarity=0.441 Sum_probs=9.8
Q ss_pred ccccccccccceEc
Q 022481 25 RRRHHCRCCGRTLC 38 (296)
Q Consensus 25 ~r~hhCr~Cg~~~C 38 (296)
.+.+.|..||+.|-
T Consensus 7 ~k~~~C~~C~k~f~ 20 (36)
T 2elv_A 7 GLLYDCHICERKFK 20 (36)
T ss_dssp CCCEECSSSCCEES
T ss_pred CCCeECCCCCCccC
Confidence 35577888888773
No 307
>1qxf_A GR2, 30S ribosomal protein S27E; structural genomics, beta sheet, PSI, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: g.41.8.4
Probab=30.16 E-value=24 Score=22.80 Aligned_cols=26 Identities=31% Similarity=0.727 Sum_probs=12.3
Q ss_pred ccccccc---cccccccccccccccceEc
Q 022481 13 RCDVCKC---SFNTFRRRHHCRCCGRTLC 38 (296)
Q Consensus 13 ~C~~C~~---~f~~~~r~hhCr~Cg~~~C 38 (296)
.|..|.+ -|+--...-.|..||.++|
T Consensus 9 KCp~C~niq~VFShA~tvV~C~~Cg~~L~ 37 (66)
T 1qxf_A 9 KCPDCEHEQVIFDHPSTIVKCIICGRTVA 37 (66)
T ss_dssp ECTTTCCEEEEESSCSSCEECSSSCCEEE
T ss_pred ECCCCCCceEEEecCceEEEcccCCCEEe
Confidence 3555544 2443334445555555554
No 308
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=30.00 E-value=17 Score=24.66 Aligned_cols=31 Identities=29% Similarity=0.657 Sum_probs=20.0
Q ss_pred cccccccccccccccccccccccc----eEcCCCCC
Q 022481 12 TRCDVCKCSFNTFRRRHHCRCCGR----TLCHEHSS 43 (296)
Q Consensus 12 ~~C~~C~~~f~~~~r~hhCr~Cg~----~~C~~c~~ 43 (296)
-.|..|++. ...-+|++|..|-. -+|..|-.
T Consensus 22 ~~Cd~C~~~-pI~G~RykC~~C~d~~~yDLC~~C~~ 56 (82)
T 2fc7_A 22 FKCDNCGIE-PIQGVRWHCQDCPPEMSLDFCDSCSD 56 (82)
T ss_dssp CCCSSSCCS-SEESCEEEESSSCSSSCCEEEGGGTT
T ss_pred CCCCCCCCC-cceeceEECCcCCCCcceecHHHHHh
Confidence 468888752 23446888888854 46666644
No 309
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=29.90 E-value=19 Score=18.60 Aligned_cols=13 Identities=31% Similarity=0.662 Sum_probs=9.0
Q ss_pred cccccccccceEc
Q 022481 26 RRHHCRCCGRTLC 38 (296)
Q Consensus 26 r~hhCr~Cg~~~C 38 (296)
+.+.|..||+.|-
T Consensus 6 k~~~C~~C~k~f~ 18 (35)
T 1srk_A 6 RPFVCRICLSAFT 18 (35)
T ss_dssp SCEECSSSCCEES
T ss_pred cCeeCCCCCcccC
Confidence 4567777877773
No 310
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.76 E-value=16 Score=20.57 Aligned_cols=13 Identities=31% Similarity=0.636 Sum_probs=9.4
Q ss_pred ccccccccccccc
Q 022481 11 ATRCDVCKCSFNT 23 (296)
Q Consensus 11 ~~~C~~C~~~f~~ 23 (296)
.-.|..|++.|..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2eq4_A 12 LYNCKECGKSFSR 24 (46)
T ss_dssp CCCBTTTTBCCSC
T ss_pred CeECCCCCCccCc
Confidence 4568888888873
No 311
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.76 E-value=15 Score=24.60 Aligned_cols=57 Identities=14% Similarity=0.290 Sum_probs=37.1
Q ss_pred Cccccccccccccccc---cccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhccc
Q 022481 8 FQEATRCDVCKCSFNT---FRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRT 70 (296)
Q Consensus 8 ~~~~~~C~~C~~~f~~---~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~ 70 (296)
..+...|.+|...|.. +..-=+|+..++.|-..|...++.. ...+.|..|...+...
T Consensus 12 ~~~~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~------~~~~~CplCr~~~~~~ 71 (80)
T 2d8s_A 12 PSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKS------SDTRCCELCKYEFIME 71 (80)
T ss_dssp CTTSCCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHH------HCCSBCSSSCCBCCCC
T ss_pred CCCCCCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhh------CCCCCCCCCCCeeecC
Confidence 3456789999988852 2112234444599999998877643 2246888888776544
No 312
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=29.67 E-value=16 Score=25.16 Aligned_cols=15 Identities=20% Similarity=0.437 Sum_probs=12.7
Q ss_pred ccccccccccceEcC
Q 022481 25 RRRHHCRCCGRTLCH 39 (296)
Q Consensus 25 ~r~hhCr~Cg~~~C~ 39 (296)
..++.|+.||.|+-.
T Consensus 33 m~~y~C~vCGyvYD~ 47 (87)
T 1s24_A 33 YLKWICITCGHIYDE 47 (87)
T ss_dssp CCEEEETTTTEEEET
T ss_pred CceEECCCCCeEecC
Confidence 468999999999864
No 313
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.55 E-value=15 Score=19.41 Aligned_cols=12 Identities=25% Similarity=0.822 Sum_probs=8.7
Q ss_pred cccccccccceE
Q 022481 26 RRHHCRCCGRTL 37 (296)
Q Consensus 26 r~hhCr~Cg~~~ 37 (296)
+.+.|..||+.|
T Consensus 8 k~~~C~~C~k~f 19 (37)
T 2elo_A 8 RSYSCPVCEKSF 19 (37)
T ss_dssp CCCEETTTTEEC
T ss_pred CCcCCCCCCCcc
Confidence 556788887776
No 314
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=29.48 E-value=20 Score=23.40 Aligned_cols=14 Identities=21% Similarity=0.351 Sum_probs=9.9
Q ss_pred cccccccccccccc
Q 022481 11 ATRCDVCKCSFNTF 24 (296)
Q Consensus 11 ~~~C~~C~~~f~~~ 24 (296)
.-.|..|..+..+-
T Consensus 8 iL~CP~ck~~L~~~ 21 (68)
T 2hf1_A 8 ILVCPLCKGPLVFD 21 (68)
T ss_dssp ECBCTTTCCBCEEE
T ss_pred heECCCCCCcCeEe
Confidence 45788888876654
No 315
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.33 E-value=16 Score=20.51 Aligned_cols=12 Identities=33% Similarity=0.811 Sum_probs=7.9
Q ss_pred cccccccccccc
Q 022481 11 ATRCDVCKCSFN 22 (296)
Q Consensus 11 ~~~C~~C~~~f~ 22 (296)
.-.|..|++.|.
T Consensus 12 ~~~C~~C~k~f~ 23 (46)
T 2ytg_A 12 PFKCGECGKSYN 23 (46)
T ss_dssp SEECTTTCCEES
T ss_pred CeECCCCCcccC
Confidence 346777777776
No 316
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.25 E-value=20 Score=20.13 Aligned_cols=12 Identities=25% Similarity=0.670 Sum_probs=8.7
Q ss_pred cccccccccccc
Q 022481 11 ATRCDVCKCSFN 22 (296)
Q Consensus 11 ~~~C~~C~~~f~ 22 (296)
.-.|..|++.|.
T Consensus 12 ~~~C~~C~k~f~ 23 (46)
T 2ytq_A 12 PYGCSECGKAFS 23 (46)
T ss_dssp SCBCSSSCCBCS
T ss_pred CcCCCccChhhC
Confidence 456778888776
No 317
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=29.25 E-value=20 Score=24.48 Aligned_cols=32 Identities=25% Similarity=0.589 Sum_probs=20.8
Q ss_pred ccccccccccccccccccccccccceEcCCCCCC
Q 022481 11 ATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSD 44 (296)
Q Consensus 11 ~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~ 44 (296)
-..|.+|.. |+ ..-..-||.||++|=..|...
T Consensus 15 D~~C~VC~~-~t-~~~l~pCRvC~RvfH~~CL~r 46 (89)
T 1wil_A 15 DEMCDVCEV-WT-AESLFPCRVCTRVFHDGCLRR 46 (89)
T ss_dssp SCCCTTTCC-CC-SSCCSSCSSSSSCCCHHHHHH
T ss_pred CcccCcccc-cc-ccceeccccccccccHhhccc
Confidence 356888764 32 234677999999886666543
No 318
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=29.21 E-value=20 Score=23.35 Aligned_cols=27 Identities=11% Similarity=0.111 Sum_probs=17.7
Q ss_pred cccccccccccccccccccccccccceEcCCCC
Q 022481 10 EATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHS 42 (296)
Q Consensus 10 ~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~ 42 (296)
+.-.|..|..+..+-. ..|..+|..|.
T Consensus 7 ~iL~CP~ck~~L~~~~------~~~~LiC~~cg 33 (68)
T 2jr6_A 7 DILVCPVTKGRLEYHQ------DKQELWSRQAK 33 (68)
T ss_dssp CCCBCSSSCCBCEEET------TTTEEEETTTT
T ss_pred hheECCCCCCcCeEeC------CCCEEEcCCCC
Confidence 3457999988766543 24677777664
No 319
>1d4u_A Nucleotide excision repair protein XPA (XPA-MBD); DNA repair, loop-rich domain, relaxation, DNA binding protein; NMR {Homo sapiens} SCOP: a.6.1.2 g.39.1.5 PDB: 1xpa_A
Probab=29.15 E-value=31 Score=24.88 Aligned_cols=12 Identities=25% Similarity=0.789 Sum_probs=9.7
Q ss_pred Cceeccccchhh
Q 022481 55 TNVRVCADCFNS 66 (296)
Q Consensus 55 ~~~rvC~~C~~~ 66 (296)
-.++||+.|...
T Consensus 24 F~~~VC~~Cr~~ 35 (111)
T 1d4u_A 24 FDLPTCDDCRDA 35 (111)
T ss_dssp TSCCCCTTTCSS
T ss_pred CCeeechhhccc
Confidence 468999999865
No 320
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.98 E-value=20 Score=20.14 Aligned_cols=13 Identities=23% Similarity=0.493 Sum_probs=9.2
Q ss_pred ccccccccccccc
Q 022481 11 ATRCDVCKCSFNT 23 (296)
Q Consensus 11 ~~~C~~C~~~f~~ 23 (296)
.-.|..|++.|..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2epz_A 12 PFDCIDCGKAFSD 24 (46)
T ss_dssp SBCCTTTCCCBSS
T ss_pred CeECCCCCceeCC
Confidence 4568888888763
No 321
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.94 E-value=20 Score=18.69 Aligned_cols=12 Identities=17% Similarity=0.564 Sum_probs=8.8
Q ss_pred cccccccccceE
Q 022481 26 RRHHCRCCGRTL 37 (296)
Q Consensus 26 r~hhCr~Cg~~~ 37 (296)
+.+.|..||+.|
T Consensus 8 k~~~C~~C~k~f 19 (36)
T 2elq_A 8 KPFKCSLCEYAT 19 (36)
T ss_dssp CSEECSSSSCEE
T ss_pred CCccCCCCCchh
Confidence 456788888777
No 322
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.88 E-value=12 Score=24.80 Aligned_cols=51 Identities=14% Similarity=0.414 Sum_probs=31.8
Q ss_pred ccccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhc
Q 022481 9 QEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 68 (296)
Q Consensus 9 ~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 68 (296)
+....|.+|...|.. ..-|..|+..|=..|..+++. ....++|..|-....
T Consensus 13 ~~i~~C~IC~~~i~~---g~~C~~C~h~fH~~Ci~kWl~------~~~~~~CP~Cr~~w~ 63 (74)
T 2ct0_A 13 DAVKICNICHSLLIQ---GQSCETCGIRMHLPCVAKYFQ------SNAEPRCPHCNDYWP 63 (74)
T ss_dssp SSSCBCSSSCCBCSS---SEECSSSCCEECHHHHHHHST------TCSSCCCTTTCSCCC
T ss_pred CCCCcCcchhhHccc---CCccCCCCchhhHHHHHHHHH------hcCCCCCCCCcCcCC
Confidence 356889999998863 345667777765555444321 122378888876554
No 323
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=34.93 E-value=12 Score=18.42 Aligned_cols=12 Identities=25% Similarity=0.542 Sum_probs=9.1
Q ss_pred cccccccccccc
Q 022481 12 TRCDVCKCSFNT 23 (296)
Q Consensus 12 ~~C~~C~~~f~~ 23 (296)
-.|..|++.|..
T Consensus 4 ~~C~~C~k~f~~ 15 (30)
T 2lvr_A 4 YVCIHCQRQFAD 15 (30)
Confidence 468889888873
No 324
>3iz5_l 60S ribosomal protein L37 (L37E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_l 3izc_l 3izs_l 3o58_d 3o5h_d 3u5e_j 3u5i_j 4b6a_j 1s1i_Y 3jyw_Y
Probab=28.54 E-value=18 Score=24.96 Aligned_cols=13 Identities=38% Similarity=1.004 Sum_probs=8.0
Q ss_pred cccccce-------EcCCCC
Q 022481 30 CRCCGRT-------LCHEHS 42 (296)
Q Consensus 30 Cr~Cg~~-------~C~~c~ 42 (296)
||.||.. .|+.|.
T Consensus 19 CrRCG~~syH~qK~~Ca~CG 38 (94)
T 3iz5_l 19 CVRCGRRSFHLQKSTCSSCG 38 (94)
T ss_dssp CTTTCSEEEEGGGTEETTTC
T ss_pred ecCcCchhhhcccccccccC
Confidence 6666665 566664
No 325
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=28.47 E-value=16 Score=18.96 Aligned_cols=12 Identities=25% Similarity=0.517 Sum_probs=9.1
Q ss_pred cccccccccccc
Q 022481 12 TRCDVCKCSFNT 23 (296)
Q Consensus 12 ~~C~~C~~~f~~ 23 (296)
-.|..|++.|..
T Consensus 3 ~~C~~C~k~F~~ 14 (33)
T 1rim_A 3 FACPECPKRFMR 14 (33)
T ss_dssp CCCSSSCCCCSS
T ss_pred ccCCCCCchhCC
Confidence 368889998873
No 326
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.32 E-value=21 Score=20.01 Aligned_cols=13 Identities=23% Similarity=0.782 Sum_probs=9.5
Q ss_pred ccccccccccccc
Q 022481 10 EATRCDVCKCSFN 22 (296)
Q Consensus 10 ~~~~C~~C~~~f~ 22 (296)
..-.|..|++.|.
T Consensus 11 k~~~C~~C~k~F~ 23 (46)
T 2elz_A 11 KPYKCEDCGKGYN 23 (46)
T ss_dssp SSCBCSSSCCBCS
T ss_pred CCeeCcccCchhC
Confidence 3457888888886
No 327
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.12 E-value=21 Score=18.74 Aligned_cols=13 Identities=23% Similarity=0.541 Sum_probs=9.3
Q ss_pred cccccccccceEc
Q 022481 26 RRHHCRCCGRTLC 38 (296)
Q Consensus 26 r~hhCr~Cg~~~C 38 (296)
+.+.|..||+.|-
T Consensus 8 k~~~C~~C~k~f~ 20 (37)
T 2elp_A 8 RAMKCPYCDFYFM 20 (37)
T ss_dssp CCEECSSSSCEEC
T ss_pred CCeECCCCChhhc
Confidence 4577888887773
No 328
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.04 E-value=20 Score=20.01 Aligned_cols=14 Identities=21% Similarity=0.731 Sum_probs=9.6
Q ss_pred cccccccccccccc
Q 022481 10 EATRCDVCKCSFNT 23 (296)
Q Consensus 10 ~~~~C~~C~~~f~~ 23 (296)
..-.|..|++.|..
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2ytr_A 11 KPYKCNECGKAFSQ 24 (46)
T ss_dssp CTTCCTTTCCCCSS
T ss_pred cCcCCCCCCCccCC
Confidence 34568888888763
No 329
>3j20_W 30S ribosomal protein S27E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=28.01 E-value=28 Score=22.30 Aligned_cols=28 Identities=29% Similarity=0.619 Sum_probs=16.9
Q ss_pred cccccccc---cccccccccccccccceEcC
Q 022481 12 TRCDVCKC---SFNTFRRRHHCRCCGRTLCH 39 (296)
Q Consensus 12 ~~C~~C~~---~f~~~~r~hhCr~Cg~~~C~ 39 (296)
-.|..|.+ -|+--.....|..||.++|.
T Consensus 16 VkCp~C~~~q~VFSha~t~V~C~~Cgt~L~~ 46 (63)
T 3j20_W 16 VKCIDCGNEQIVFSHPATKVRCLICGATLVE 46 (63)
T ss_dssp EECSSSCCEEEEESSCSSCEECSSSCCEEEE
T ss_pred EECCCCCCeeEEEecCCeEEEccCcCCEEec
Confidence 35666665 35554555666677666654
No 330
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.76 E-value=18 Score=20.30 Aligned_cols=12 Identities=33% Similarity=0.761 Sum_probs=8.7
Q ss_pred cccccccccccc
Q 022481 11 ATRCDVCKCSFN 22 (296)
Q Consensus 11 ~~~C~~C~~~f~ 22 (296)
.-.|..|++.|.
T Consensus 12 ~~~C~~C~k~f~ 23 (46)
T 2eop_A 12 PHECRECGKSFS 23 (46)
T ss_dssp SCBCTTTCCBCS
T ss_pred CeeCCCCCchhC
Confidence 456778888776
No 331
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=27.63 E-value=17 Score=19.16 Aligned_cols=14 Identities=29% Similarity=0.676 Sum_probs=11.0
Q ss_pred cccccccccccccc
Q 022481 10 EATRCDVCKCSFNT 23 (296)
Q Consensus 10 ~~~~C~~C~~~f~~ 23 (296)
..-.|..|++.|..
T Consensus 10 k~~~C~~C~k~f~~ 23 (37)
T 1p7a_A 10 KPFQCPDCDRSFSR 23 (37)
T ss_dssp SSBCCTTTCCCBSS
T ss_pred CCccCCCCCcccCc
Confidence 34679999999973
No 332
>1v6g_A Actin binding LIM protein 2; LIM domain, zinc binding domain, ablim2, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=27.58 E-value=26 Score=23.06 Aligned_cols=13 Identities=23% Similarity=0.462 Sum_probs=9.2
Q ss_pred eccccchhhhccc
Q 022481 58 RVCADCFNSSSRT 70 (296)
Q Consensus 58 rvC~~C~~~~~~~ 70 (296)
-.|..||..+...
T Consensus 64 ~~C~~C~~~~~~~ 76 (81)
T 1v6g_A 64 CMCQKCSLPVSVS 76 (81)
T ss_dssp EEEHHHHSCCSSC
T ss_pred EEChhhhcccCCC
Confidence 4799999766544
No 333
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.49 E-value=23 Score=19.78 Aligned_cols=13 Identities=31% Similarity=0.616 Sum_probs=9.4
Q ss_pred ccccccccccccc
Q 022481 11 ATRCDVCKCSFNT 23 (296)
Q Consensus 11 ~~~C~~C~~~f~~ 23 (296)
.-.|..|++.|..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2eov_A 12 PYKCSDCGKSFTW 24 (46)
T ss_dssp SCBCSSSCCBCSS
T ss_pred CccCCccChhhCC
Confidence 4568888888873
No 334
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=27.39 E-value=19 Score=24.36 Aligned_cols=15 Identities=20% Similarity=0.399 Sum_probs=12.6
Q ss_pred ccccccccccceEcC
Q 022481 25 RRRHHCRCCGRTLCH 39 (296)
Q Consensus 25 ~r~hhCr~Cg~~~C~ 39 (296)
.+++.|+.||.|+-.
T Consensus 25 m~~y~C~vCGyvYD~ 39 (81)
T 2kn9_A 25 YKLFRCIQCGFEYDE 39 (81)
T ss_dssp CCEEEETTTCCEEET
T ss_pred cceEEeCCCCEEEcC
Confidence 368999999999864
No 335
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=27.17 E-value=22 Score=22.12 Aligned_cols=25 Identities=16% Similarity=0.527 Sum_probs=17.3
Q ss_pred cccccccccccccccccccccccccceEcC--CCC
Q 022481 10 EATRCDVCKCSFNTFRRRHHCRCCGRTLCH--EHS 42 (296)
Q Consensus 10 ~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~--~c~ 42 (296)
+.-.|..|+.++.+-. |..+|. .|.
T Consensus 9 ~iL~CP~c~~~L~~~~--------~~L~C~~~~c~ 35 (56)
T 2kpi_A 9 EILACPACHAPLEERD--------AELICTGQDCG 35 (56)
T ss_dssp TSCCCSSSCSCEEEET--------TEEEECSSSCC
T ss_pred hheeCCCCCCcceecC--------CEEEcCCcCCC
Confidence 4457999998776544 666776 664
No 336
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=27.10 E-value=23 Score=23.00 Aligned_cols=15 Identities=20% Similarity=0.262 Sum_probs=10.3
Q ss_pred ccccccccccccccc
Q 022481 10 EATRCDVCKCSFNTF 24 (296)
Q Consensus 10 ~~~~C~~C~~~f~~~ 24 (296)
+.-.|..|..+..+.
T Consensus 9 eiL~CP~ck~~L~~~ 23 (67)
T 2jny_A 9 EVLACPKDKGPLRYL 23 (67)
T ss_dssp CCCBCTTTCCBCEEE
T ss_pred HHhCCCCCCCcCeEe
Confidence 345788888876654
No 337
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=27.05 E-value=41 Score=19.16 Aligned_cols=18 Identities=17% Similarity=0.237 Sum_probs=14.4
Q ss_pred hhHhhhcCcHHHHHHHHH
Q 022481 268 LDCAPVTLQYKMRQKMEE 285 (296)
Q Consensus 268 L~~A~~~g~~~iv~~Ll~ 285 (296)
+..|+..|+++.+++|..
T Consensus 17 iyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHTTSCHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHH
Confidence 467888999999988854
No 338
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=26.90 E-value=16 Score=32.69 Aligned_cols=48 Identities=17% Similarity=0.350 Sum_probs=33.7
Q ss_pred cccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhccc
Q 022481 12 TRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRT 70 (296)
Q Consensus 12 ~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~ 70 (296)
..|.+|...|. .-..-.||++||..|...+.. ...+.|..|...+...
T Consensus 333 ~~C~ICle~~~----~pv~lpCGH~FC~~Ci~~wl~-------~~~~~CP~CR~~i~~~ 380 (389)
T 2y1n_A 333 QLCKICAENDK----DVKIEPCGHLMCTSCLTSWQE-------SEGQGCPFCRCEIKGT 380 (389)
T ss_dssp SBCTTTSSSBC----CEEEETTCCEECHHHHHHHHH-------HTCSBCTTTCCBCCEE
T ss_pred CCCCccCcCCC----CeEEeCCCChhhHHHHHHHHh-------cCCCCCCCCCCccCCc
Confidence 58999987763 334568999999999855432 1346788887766543
No 339
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.79 E-value=6.6 Score=25.84 Aligned_cols=43 Identities=19% Similarity=0.465 Sum_probs=29.2
Q ss_pred ccccccccccccccccccccccccce-EcCCCCCCceecCCCCCCCceeccccchhhhcc
Q 022481 11 ATRCDVCKCSFNTFRRRHHCRCCGRT-LCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSR 69 (296)
Q Consensus 11 ~~~C~~C~~~f~~~~r~hhCr~Cg~~-~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~ 69 (296)
...|.+|...|.-. ---.||++ ||..|.. ..+.|..|...+..
T Consensus 25 ~~~C~IC~~~~~~~----~~~pCgH~~~C~~C~~------------~~~~CP~Cr~~i~~ 68 (75)
T 2ecg_A 25 EKLCKICMDRNIAI----VFVPCGHLVTCKQCAE------------AVDKCPMCYTVITF 68 (75)
T ss_dssp HHSCSSSCSSCCCB----CCSSSCCCCBCHHHHH------------HCSBCTTTCCBCCC
T ss_pred CCCCCcCCCCCCCE----EEecCCCHHHHHHHhh------------CCCCCccCCceecC
Confidence 35799998876532 22479999 9999962 23678888776644
No 340
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=26.64 E-value=22 Score=20.43 Aligned_cols=14 Identities=21% Similarity=0.629 Sum_probs=10.4
Q ss_pred ccccccccccceEc
Q 022481 25 RRRHHCRCCGRTLC 38 (296)
Q Consensus 25 ~r~hhCr~Cg~~~C 38 (296)
.|.+.|..||+.|-
T Consensus 5 ~kp~~C~~C~k~F~ 18 (48)
T 3iuf_A 5 DKPYACDICGKRYK 18 (48)
T ss_dssp TSCEECTTTCCEES
T ss_pred CcCEECCCcCcccC
Confidence 35677888888884
No 341
>3k7a_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, DNA-binding, DNA- directed RNA polymerase, isopeptide bond, magnesium; 3.80A {Saccharomyces cerevisiae}
Probab=26.63 E-value=24 Score=30.82 Aligned_cols=15 Identities=20% Similarity=0.361 Sum_probs=5.8
Q ss_pred CCCCcc-ccccccccc
Q 022481 5 PPAFQE-ATRCDVCKC 19 (296)
Q Consensus 5 w~~~~~-~~~C~~C~~ 19 (296)
|.|+-. ...|..|+.
T Consensus 14 ~~~~~~~~~~Cp~Cg~ 29 (345)
T 3k7a_M 14 RGPNLNIVLTCPECKV 29 (345)
T ss_dssp ---CCCCCCCCSTTCC
T ss_pred cCccccCCCcCcCCCC
Confidence 444433 445555554
No 342
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=26.62 E-value=22 Score=19.87 Aligned_cols=12 Identities=25% Similarity=0.783 Sum_probs=8.8
Q ss_pred cccccccccccc
Q 022481 11 ATRCDVCKCSFN 22 (296)
Q Consensus 11 ~~~C~~C~~~f~ 22 (296)
.-.|..|++.|.
T Consensus 12 ~~~C~~C~k~F~ 23 (46)
T 2em0_A 12 TWKCRECDMCFS 23 (46)
T ss_dssp CCCCSSSCCCCS
T ss_pred CeECCCCCcccC
Confidence 356888888876
No 343
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=26.58 E-value=19 Score=19.90 Aligned_cols=14 Identities=21% Similarity=0.501 Sum_probs=11.0
Q ss_pred cccccccccccccc
Q 022481 10 EATRCDVCKCSFNT 23 (296)
Q Consensus 10 ~~~~C~~C~~~f~~ 23 (296)
..-.|..|++.|+.
T Consensus 7 kp~~C~~CgK~F~~ 20 (36)
T 1fv5_A 7 ARFMCLPCGIAFSS 20 (36)
T ss_dssp CCCEETTTTEECSC
T ss_pred cCeECCCCCCccCC
Confidence 45679999999984
No 344
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=26.47 E-value=25 Score=23.00 Aligned_cols=15 Identities=20% Similarity=0.572 Sum_probs=9.9
Q ss_pred ccccccccccccccc
Q 022481 10 EATRCDVCKCSFNTF 24 (296)
Q Consensus 10 ~~~~C~~C~~~f~~~ 24 (296)
+.-.|..|+.+..+-
T Consensus 7 eiL~CP~ck~~L~~~ 21 (69)
T 2pk7_A 7 DILACPICKGPLKLS 21 (69)
T ss_dssp GTCCCTTTCCCCEEC
T ss_pred hheeCCCCCCcCeEe
Confidence 345788888776643
No 345
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.40 E-value=35 Score=21.29 Aligned_cols=23 Identities=22% Similarity=0.638 Sum_probs=18.3
Q ss_pred cccccccccccccccccccccccceEcC
Q 022481 12 TRCDVCKCSFNTFRRRHHCRCCGRTLCH 39 (296)
Q Consensus 12 ~~C~~C~~~f~~~~r~hhCr~Cg~~~C~ 39 (296)
..|.+|+. + -++.|..|+.-+|+
T Consensus 13 ~~C~vC~~-~----~kY~CPrC~~~yCS 35 (56)
T 2yqq_A 13 VVCVICLE-K----PKYRCPACRVPYCS 35 (56)
T ss_dssp CCCTTTCS-C----CSEECTTTCCEESS
T ss_pred CccCcCcC-C----CeeeCCCCCCCeeC
Confidence 46888887 2 26889999999986
No 346
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.38 E-value=18 Score=20.30 Aligned_cols=12 Identities=42% Similarity=0.974 Sum_probs=8.7
Q ss_pred cccccccccccc
Q 022481 11 ATRCDVCKCSFN 22 (296)
Q Consensus 11 ~~~C~~C~~~f~ 22 (296)
.-.|..|++.|.
T Consensus 12 ~~~C~~C~k~f~ 23 (46)
T 2eoq_A 12 PFKCDICGKSFC 23 (46)
T ss_dssp SCCCSSSCCCCS
T ss_pred CcCCCcCCchhC
Confidence 456778888776
No 347
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=26.38 E-value=21 Score=23.35 Aligned_cols=12 Identities=25% Similarity=0.830 Sum_probs=8.7
Q ss_pred cccccc--cccccc
Q 022481 11 ATRCDV--CKCSFN 22 (296)
Q Consensus 11 ~~~C~~--C~~~f~ 22 (296)
.-.|.. |++.|.
T Consensus 5 ~~~C~~~~C~~~f~ 18 (89)
T 2wbs_A 5 THTCDYAGCGKTYT 18 (89)
T ss_dssp CEECCSTTTCCEES
T ss_pred CeeCCCCCCCCcCC
Confidence 346777 888886
No 348
>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4
Probab=26.31 E-value=18 Score=22.39 Aligned_cols=15 Identities=13% Similarity=0.541 Sum_probs=11.2
Q ss_pred Ccccccccccccccc
Q 022481 8 FQEATRCDVCKCSFN 22 (296)
Q Consensus 8 ~~~~~~C~~C~~~f~ 22 (296)
+.-...|..|+.+|+
T Consensus 10 ~~P~~eC~lC~vkYs 24 (55)
T 2yrk_A 10 DGTKPECTLCGVKYS 24 (55)
T ss_dssp CCCCSCCTTTTCCCC
T ss_pred CCCCccccccCcccc
Confidence 334568999999887
No 349
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.98 E-value=17 Score=20.37 Aligned_cols=14 Identities=21% Similarity=0.672 Sum_probs=9.7
Q ss_pred cccccccccccccc
Q 022481 10 EATRCDVCKCSFNT 23 (296)
Q Consensus 10 ~~~~C~~C~~~f~~ 23 (296)
..-.|..|++.|..
T Consensus 11 ~~~~C~~C~k~F~~ 24 (46)
T 2eoe_A 11 KPYKCNECGKVFTQ 24 (46)
T ss_dssp CSSEETTTTEECSS
T ss_pred CCeECCCcChhhCC
Confidence 34568888888773
No 350
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=25.63 E-value=14 Score=18.93 Aligned_cols=11 Identities=27% Similarity=0.631 Sum_probs=8.9
Q ss_pred ccccccccccc
Q 022481 12 TRCDVCKCSFN 22 (296)
Q Consensus 12 ~~C~~C~~~f~ 22 (296)
-.|..|++.|.
T Consensus 3 ~~C~~C~k~f~ 13 (32)
T 2kfq_A 3 FACPACPKRFM 13 (32)
T ss_dssp SSSSSSCTTHH
T ss_pred CCCCCCCcccC
Confidence 36889999887
No 351
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=25.30 E-value=27 Score=19.57 Aligned_cols=13 Identities=23% Similarity=0.654 Sum_probs=9.3
Q ss_pred ccccccccccccc
Q 022481 11 ATRCDVCKCSFNT 23 (296)
Q Consensus 11 ~~~C~~C~~~f~~ 23 (296)
.-.|..|++.|..
T Consensus 12 ~~~C~~C~k~F~~ 24 (46)
T 2emk_A 12 PYECKECGKAFSQ 24 (46)
T ss_dssp SCBCSSSCCBCSC
T ss_pred ceECCCCCchhCC
Confidence 4568888888873
No 352
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=25.28 E-value=30 Score=21.61 Aligned_cols=13 Identities=15% Similarity=0.511 Sum_probs=9.0
Q ss_pred ccccccc--cccccc
Q 022481 10 EATRCDV--CKCSFN 22 (296)
Q Consensus 10 ~~~~C~~--C~~~f~ 22 (296)
..-.|.. |++.|.
T Consensus 16 ~~~~C~~~~C~k~f~ 30 (72)
T 2epa_A 16 RSHICSHPGCGKTYF 30 (72)
T ss_dssp CCEECSSTTTCCEES
T ss_pred CceeCCCCCCccccC
Confidence 3456776 888886
No 353
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=24.68 E-value=24 Score=22.73 Aligned_cols=10 Identities=30% Similarity=0.883 Sum_probs=7.1
Q ss_pred cc--cccccccc
Q 022481 13 RC--DVCKCSFN 22 (296)
Q Consensus 13 ~C--~~C~~~f~ 22 (296)
.| ..|++.|.
T Consensus 3 ~C~~~~C~~~f~ 14 (85)
T 2j7j_A 3 VCHFENCGKAFK 14 (85)
T ss_dssp ECCSTTCCCEES
T ss_pred cCCCCCCCcccC
Confidence 46 67888775
No 354
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=24.65 E-value=4.1 Score=28.87 Aligned_cols=49 Identities=18% Similarity=0.485 Sum_probs=31.1
Q ss_pred cccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhccc
Q 022481 12 TRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRT 70 (296)
Q Consensus 12 ~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~ 70 (296)
..|..|+.+|...-|-- .|..+||.+|..... .+..+.|..|.+.+.+-
T Consensus 2 hfC~~C~~Pi~iygRmI---PCkHvFCydCa~~~~-------~~~~k~Cp~C~~~V~rV 50 (101)
T 3vk6_A 2 HFCDKCGLPIKVYGRMI---PCKHVFCYDCAILHE-------KKGDKMCPGCSDPVQRI 50 (101)
T ss_dssp CBCTTTCSBCSEEEEEE---TTCCEEEHHHHHHHH-------HTTCCBCTTTCCBCSEE
T ss_pred eecCccCCCeEEEeeec---cccccHHHHHHHHHH-------hccCCCCcCcCCeeeee
Confidence 46888999998755543 566799999974321 12345666666555443
No 355
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.62 E-value=25 Score=18.60 Aligned_cols=13 Identities=15% Similarity=0.245 Sum_probs=8.9
Q ss_pred cccccccccceEc
Q 022481 26 RRHHCRCCGRTLC 38 (296)
Q Consensus 26 r~hhCr~Cg~~~C 38 (296)
|.+.|..||+.|-
T Consensus 8 k~~~C~~C~k~f~ 20 (37)
T 2elm_A 8 HLYYCSQCHYSSI 20 (37)
T ss_dssp CEEECSSSSCEEE
T ss_pred cCeECCCCCcccC
Confidence 4567777777763
No 356
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=24.32 E-value=13 Score=26.48 Aligned_cols=54 Identities=11% Similarity=0.128 Sum_probs=34.4
Q ss_pred CCCCccccccccccccccccc----------c----ccccccccceEcCCCCCCceecCCCCCCCceeccccchhh
Q 022481 5 PPAFQEATRCDVCKCSFNTFR----------R----RHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNS 66 (296)
Q Consensus 5 w~~~~~~~~C~~C~~~f~~~~----------r----~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~ 66 (296)
|.-+.+...|.+|...|...- . ...--.||++|+..|...++.. ...|..|...
T Consensus 31 w~~d~~~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~--------~~~CP~Cr~~ 98 (106)
T 3dpl_R 31 WAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT--------RQVCPLDNRE 98 (106)
T ss_dssp EEESSCSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTT--------CSBCSSSCSB
T ss_pred eecCCCCCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHc--------CCcCcCCCCc
Confidence 444556788999999887421 0 1112469999999997665321 3467777654
No 357
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=24.07 E-value=24 Score=24.58 Aligned_cols=28 Identities=25% Similarity=0.719 Sum_probs=18.6
Q ss_pred ccccc--ccccccccc------------ccccccccccceEc
Q 022481 11 ATRCD--VCKCSFNTF------------RRRHHCRCCGRTLC 38 (296)
Q Consensus 11 ~~~C~--~C~~~f~~~------------~r~hhCr~Cg~~~C 38 (296)
.-.|. .|++.|... .+.+.|..||+.|-
T Consensus 36 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 77 (119)
T 2jp9_A 36 PYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFS 77 (119)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEES
T ss_pred CccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhC
Confidence 34687 699988732 14467888877773
No 358
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=24.07 E-value=1.5e+02 Score=26.55 Aligned_cols=48 Identities=10% Similarity=-0.029 Sum_probs=38.6
Q ss_pred HHHcCCHHHHHHHHHCCCCCCcc--------------CCCCCCHhhHhhhcCcHHHHHHHHH
Q 022481 238 AALFNRTDIAFILMESGANMDCK--------------NAQGESPLDCAPVTLQYKMRQKMEE 285 (296)
Q Consensus 238 A~~~g~~~iv~~LL~~ga~~~~~--------------d~~g~TpL~~A~~~g~~~iv~~Ll~ 285 (296)
.+..|+...|+.-|..|.|++.+ -.-|.|-+|+|++..+.+|+..|+.
T Consensus 29 gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 29 GVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 35668888888888888776542 2358999999999999999999986
No 359
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=23.77 E-value=23 Score=28.12 Aligned_cols=13 Identities=31% Similarity=0.721 Sum_probs=11.1
Q ss_pred cccccccccceEc
Q 022481 26 RRHHCRCCGRTLC 38 (296)
Q Consensus 26 r~hhCr~Cg~~~C 38 (296)
.++.|+.||.|+=
T Consensus 154 ~~~~C~~CG~~~~ 166 (191)
T 1lko_A 154 TKWRCRNCGYVHE 166 (191)
T ss_dssp EEEEETTTCCEEE
T ss_pred ceEEECCCCCEee
Confidence 3789999999974
No 360
>2d8q_A BLU protein, zinc finger MYND domain containing protein 10; zmynd10, ZF-MYND, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.1 PDB: 2dan_A
Probab=23.42 E-value=33 Score=22.30 Aligned_cols=21 Identities=24% Similarity=0.743 Sum_probs=14.6
Q ss_pred ccccccccccccccccccccccccce
Q 022481 11 ATRCDVCKCSFNTFRRRHHCRCCGRT 36 (296)
Q Consensus 11 ~~~C~~C~~~f~~~~r~hhCr~Cg~~ 36 (296)
...|..|++. ..+.|..|..+
T Consensus 15 ~~~C~~C~~~-----~~~~Cs~Ck~v 35 (70)
T 2d8q_A 15 RPRCAYCSAE-----ASKRCSRCQNE 35 (70)
T ss_dssp CCBCSSSCCB-----CCCBCTTTSCC
T ss_pred CCcCCCCCCc-----ccccCCCCCCE
Confidence 5688888874 34667777766
No 361
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=23.29 E-value=29 Score=18.51 Aligned_cols=13 Identities=31% Similarity=0.700 Sum_probs=9.1
Q ss_pred cccccccccceEc
Q 022481 26 RRHHCRCCGRTLC 38 (296)
Q Consensus 26 r~hhCr~Cg~~~C 38 (296)
+.+.|..||+.|-
T Consensus 5 k~~~C~~C~k~f~ 17 (39)
T 1njq_A 5 RSYTCSFCKREFR 17 (39)
T ss_dssp SSEECTTTCCEES
T ss_pred CceECCCCCcccC
Confidence 4567888887773
No 362
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.26 E-value=30 Score=19.28 Aligned_cols=14 Identities=21% Similarity=0.672 Sum_probs=9.7
Q ss_pred cccccccccccccc
Q 022481 10 EATRCDVCKCSFNT 23 (296)
Q Consensus 10 ~~~~C~~C~~~f~~ 23 (296)
..-.|..|++.|..
T Consensus 11 k~~~C~~C~k~F~~ 24 (46)
T 2ytn_A 11 KPYKCNECGKVFTQ 24 (46)
T ss_dssp SSCBCTTTCCBCSS
T ss_pred cCeECCCCCCeeCC
Confidence 34568888888873
No 363
>2dj8_A Protein CBFA2T1; zinc finger MYND domain, protein MTG8, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=23.17 E-value=65 Score=19.98 Aligned_cols=26 Identities=19% Similarity=0.581 Sum_probs=16.8
Q ss_pred ccccccccccccccccccccccccccce-EcC
Q 022481 9 QEATRCDVCKCSFNTFRRRHHCRCCGRT-LCH 39 (296)
Q Consensus 9 ~~~~~C~~C~~~f~~~~r~hhCr~Cg~~-~C~ 39 (296)
.+...|..|++. ..+.|..|..+ +|.
T Consensus 13 ~~~~~C~~C~~~-----~~~~Cs~C~~v~YCs 39 (60)
T 2dj8_A 13 DSSESCWNCGRK-----ASETCSGCNTARYCG 39 (60)
T ss_dssp CCSCCCSSSCSC-----CCEECTTTSCCEESS
T ss_pred CCCcccccCCCC-----CcccCCCCCCEeeeC
Confidence 345788888872 34667777665 443
No 364
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.05 E-value=29 Score=19.18 Aligned_cols=14 Identities=21% Similarity=0.750 Sum_probs=10.0
Q ss_pred ccccccccccceEc
Q 022481 25 RRRHHCRCCGRTLC 38 (296)
Q Consensus 25 ~r~hhCr~Cg~~~C 38 (296)
.+.+.|..||+.|-
T Consensus 10 ~k~~~C~~C~k~F~ 23 (44)
T 2epv_A 10 EKPYECNECGKAFI 23 (44)
T ss_dssp CCSEECSSSCCEES
T ss_pred CcCeECCCCCcccC
Confidence 35677888888773
No 365
>2jl6_1 50S ribosomal protein L28, 50S ribosomal protein L25; methylation, translation, paromomycin, tRNA-binding, tRNA, zinc, mRNA, ribosome, repressor, RNA-binding; 3.45A {Thermus thermophilus} PDB: 2jl8_1
Probab=22.79 E-value=29 Score=23.89 Aligned_cols=21 Identities=19% Similarity=0.154 Sum_probs=16.4
Q ss_pred CCCCceeccccchhhhcccCC
Q 022481 52 GIHTNVRVCADCFNSSSRTGK 72 (296)
Q Consensus 52 ~~~~~~rvC~~C~~~~~~~~~ 72 (296)
|....+|||..|...+.....
T Consensus 55 g~~~rl~Vstk~LRtI~k~g~ 75 (89)
T 2jl6_1 55 GQEITFRVAASHIPKVYELVE 75 (89)
T ss_dssp TEECCBCCBGGGHHHHHHHHS
T ss_pred CEEEEEEEEChhheEccccch
Confidence 555788999999998876543
No 366
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=22.70 E-value=30 Score=22.66 Aligned_cols=27 Identities=22% Similarity=0.535 Sum_probs=15.5
Q ss_pred cccccccccccccccccccccccccceEcCCCC
Q 022481 10 EATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHS 42 (296)
Q Consensus 10 ~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~ 42 (296)
+.-.|..|+.+..+-..+ |..+|..|.
T Consensus 7 ~iL~CP~ck~~L~~~~~~------~~LiC~~cg 33 (70)
T 2js4_A 7 DILVCPVCKGRLEFQRAQ------AELVCNADR 33 (70)
T ss_dssp CCCBCTTTCCBEEEETTT------TEEEETTTT
T ss_pred hheECCCCCCcCEEeCCC------CEEEcCCCC
Confidence 345788888876654321 455555553
No 367
>2od1_A Protein CBFA2T1; zinc finger, cross-braced topology, metal binding protein; NMR {Homo sapiens}
Probab=22.52 E-value=40 Score=21.01 Aligned_cols=26 Identities=19% Similarity=0.581 Sum_probs=16.9
Q ss_pred ccccccccccccccccccccccccccce-EcC
Q 022481 9 QEATRCDVCKCSFNTFRRRHHCRCCGRT-LCH 39 (296)
Q Consensus 9 ~~~~~C~~C~~~f~~~~r~hhCr~Cg~~-~C~ 39 (296)
.....|..|++. ..+.|..|..+ +|+
T Consensus 11 ~~~~~C~~C~~~-----~~~~Cs~C~~v~YCs 37 (60)
T 2od1_A 11 DSSESCWNCGRK-----ASETCSGCNTARYCG 37 (60)
T ss_dssp CCSSCCTTTSSC-----CCEECTTTSCCEESS
T ss_pred CCCCccccCCCc-----ccccCCCCCCeeecC
Confidence 345688888873 34667777765 543
No 368
>1gnf_A Transcription factor GATA-1; zinc finger, transcription regulation; NMR {Mus musculus} SCOP: g.39.1.1 PDB: 1y0j_A 2l6y_A 2l6z_A
Probab=22.18 E-value=73 Score=18.89 Aligned_cols=13 Identities=15% Similarity=0.283 Sum_probs=8.3
Q ss_pred eccccchhhhccc
Q 022481 58 RVCADCFNSSSRT 70 (296)
Q Consensus 58 rvC~~C~~~~~~~ 70 (296)
-+|+.|--.....
T Consensus 26 ~LCNaCGl~~k~~ 38 (46)
T 1gnf_A 26 YLCNACGLYHKMN 38 (46)
T ss_dssp CBCSHHHHHHHHT
T ss_pred ccchHHHHHHHHc
Confidence 6777776655443
No 369
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, transcription factor, DNA-binding, DNA-directed RNA polymerase; 4.30A {Saccharomyces cerevisiae}
Probab=22.11 E-value=36 Score=26.70 Aligned_cols=12 Identities=33% Similarity=0.252 Sum_probs=6.0
Q ss_pred ceeccccchhhh
Q 022481 56 NVRVCADCFNSS 67 (296)
Q Consensus 56 ~~rvC~~C~~~~ 67 (296)
-..||..|=-.+
T Consensus 41 GE~VCsdCGLVL 52 (197)
T 3k1f_M 41 GDVVCALCGLVL 52 (197)
T ss_dssp TEEEETTTCBBC
T ss_pred CEEEEcCCCCCc
Confidence 345555554444
No 370
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=22.08 E-value=85 Score=19.37 Aligned_cols=55 Identities=18% Similarity=0.439 Sum_probs=32.4
Q ss_pred ccccccccccccccccccccccccccceEcCCCCCCceecCCCCCCCceeccccchhhhcccC
Q 022481 9 QEATRCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRTG 71 (296)
Q Consensus 9 ~~~~~C~~C~~~f~~~~r~hhCr~Cg~~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~~ 71 (296)
.....|.+|++. + .-.-|-.|.+.|=..|..- ++... ....-.|..|.....++.
T Consensus 3 ~~~~~C~vC~~~-g---~ll~Cd~C~~~fH~~Cl~p--pl~~~--p~g~W~C~~C~~~~~~~~ 57 (60)
T 2puy_A 3 IHEDFCSVCRKS-G---QLLMCDTCSRVYHLDCLDP--PLKTI--PKGMWICPRCQDQMLKKE 57 (60)
T ss_dssp CCCSSCTTTCCC-S---SCEECSSSSCEECGGGSSS--CCSSC--CCSCCCCHHHHHHHHHTT
T ss_pred CCCCCCcCCCCC-C---cEEEcCCCCcCEECCcCCC--CcCCC--CCCceEChhccChhhchh
Confidence 345679999874 2 2345666666665555442 12221 234678999988776543
No 371
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=22.08 E-value=31 Score=16.47 Aligned_cols=11 Identities=36% Similarity=0.920 Sum_probs=6.9
Q ss_pred ccccc--cccceE
Q 022481 27 RHHCR--CCGRTL 37 (296)
Q Consensus 27 ~hhCr--~Cg~~~ 37 (296)
.+.|. .||+.|
T Consensus 2 ~~~C~~~~C~k~f 14 (29)
T 2ab3_A 2 VYVCHFENCGRSF 14 (29)
T ss_dssp CEEECSTTTCEEE
T ss_pred CCCCcCCcCcCcc
Confidence 34566 777666
No 372
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=21.98 E-value=28 Score=24.51 Aligned_cols=11 Identities=27% Similarity=0.637 Sum_probs=7.4
Q ss_pred cccc--ccccccc
Q 022481 12 TRCD--VCKCSFN 22 (296)
Q Consensus 12 ~~C~--~C~~~f~ 22 (296)
-.|. .|++.|.
T Consensus 6 ~~C~~~~C~~~f~ 18 (124)
T 1ubd_C 6 IACPHKGCTKMFR 18 (124)
T ss_dssp EECCSTTCCCEES
T ss_pred ccCCCCCCcCccC
Confidence 3566 6777775
No 373
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=21.83 E-value=29 Score=28.82 Aligned_cols=26 Identities=31% Similarity=0.699 Sum_probs=14.0
Q ss_pred ccccccccccc--cc---c---cccccccccceE
Q 022481 12 TRCDVCKCSFN--TF---R---RRHHCRCCGRTL 37 (296)
Q Consensus 12 ~~C~~C~~~f~--~~---~---r~hhCr~Cg~~~ 37 (296)
..|..|+-... .+ + .-..|.+||+|+
T Consensus 199 ~~C~GC~~~lppq~~~~i~~~~~Iv~Cp~CgRIL 232 (256)
T 3na7_A 199 QACGGCFIRLNDKIYTEVLTSGDMITCPYCGRIL 232 (256)
T ss_dssp TBCTTTCCBCCHHHHHHHHHSSSCEECTTTCCEE
T ss_pred CccCCCCeeeCHHHHHHHHCCCCEEECCCCCeeE
Confidence 46777777554 11 1 224566666654
No 374
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.63 E-value=34 Score=19.02 Aligned_cols=14 Identities=29% Similarity=0.821 Sum_probs=10.1
Q ss_pred ccccccccccceEc
Q 022481 25 RRRHHCRCCGRTLC 38 (296)
Q Consensus 25 ~r~hhCr~Cg~~~C 38 (296)
.+.+.|..||+.|-
T Consensus 10 ~~~~~C~~C~k~F~ 23 (46)
T 2emi_A 10 ERHYECSECGKAFI 23 (46)
T ss_dssp CCCEECSSSCCEES
T ss_pred CCCCCCCCCCcccC
Confidence 35677888888774
No 375
>2k2d_A Ring finger and CHY zinc finger domain- containing protein 1; zinc-binding protein, cytoplasm, metal-binding, nucleus, metal binding protein; NMR {Homo sapiens}
Probab=21.59 E-value=27 Score=23.49 Aligned_cols=12 Identities=17% Similarity=0.440 Sum_probs=8.6
Q ss_pred cccccccccccc
Q 022481 12 TRCDVCKCSFNT 23 (296)
Q Consensus 12 ~~C~~C~~~f~~ 23 (296)
-.|..|+++|..
T Consensus 38 I~CnDC~~~s~v 49 (79)
T 2k2d_A 38 ILCNDCNGRSTV 49 (79)
T ss_dssp EEESSSCCEEEE
T ss_pred EECCCCCCCccC
Confidence 368888887763
No 376
>2xzm_6 RPS27E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_6
Probab=21.53 E-value=42 Score=22.61 Aligned_cols=27 Identities=26% Similarity=0.747 Sum_probs=14.2
Q ss_pred ccccccc---cccccccccccccccceEcC
Q 022481 13 RCDVCKC---SFNTFRRRHHCRCCGRTLCH 39 (296)
Q Consensus 13 ~C~~C~~---~f~~~~r~hhCr~Cg~~~C~ 39 (296)
.|..|.. -|+--..-..|..||.++|.
T Consensus 34 kCp~C~n~q~VFShA~t~V~C~~Cg~~L~~ 63 (81)
T 2xzm_6 34 KCAQCQNIQMIFSNAQSTIICEKCSAILCK 63 (81)
T ss_dssp ECSSSCCEEEEETTCSSCEECSSSCCEEEE
T ss_pred ECCCCCCeeEEEecCccEEEccCCCCEEee
Confidence 4556655 24444445556666665553
No 377
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.36 E-value=34 Score=18.45 Aligned_cols=14 Identities=29% Similarity=0.821 Sum_probs=9.9
Q ss_pred ccccccccccceEc
Q 022481 25 RRRHHCRCCGRTLC 38 (296)
Q Consensus 25 ~r~hhCr~Cg~~~C 38 (296)
.+.+.|..||+.|-
T Consensus 8 ~k~~~C~~C~k~f~ 21 (41)
T 2ept_A 8 QRVYECQECGKSFR 21 (41)
T ss_dssp CCCEECSSSCCEES
T ss_pred CCCeECCCCCCCcC
Confidence 35677888888773
No 378
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.10 E-value=28 Score=18.86 Aligned_cols=14 Identities=29% Similarity=0.710 Sum_probs=11.1
Q ss_pred cccccccccccccc
Q 022481 10 EATRCDVCKCSFNT 23 (296)
Q Consensus 10 ~~~~C~~C~~~f~~ 23 (296)
..-.|..|++.|..
T Consensus 9 k~~~C~~C~k~f~~ 22 (42)
T 2yte_A 9 KPYSCAECKETFSD 22 (42)
T ss_dssp CSCBCTTTCCBCSS
T ss_pred CCeECCCCCCccCC
Confidence 34679999999984
No 379
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.87 E-value=36 Score=18.95 Aligned_cols=14 Identities=29% Similarity=0.859 Sum_probs=9.8
Q ss_pred ccccccccccceEc
Q 022481 25 RRRHHCRCCGRTLC 38 (296)
Q Consensus 25 ~r~hhCr~Cg~~~C 38 (296)
.+.+.|..||+.|=
T Consensus 10 ~k~~~C~~C~k~F~ 23 (46)
T 2ytp_A 10 ERHYECSECGKAFA 23 (46)
T ss_dssp CCCEECSSSCCEES
T ss_pred CCCeECCcCCcccC
Confidence 35677888887773
No 380
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=20.66 E-value=37 Score=18.27 Aligned_cols=14 Identities=21% Similarity=0.646 Sum_probs=9.4
Q ss_pred ccccccccccceEc
Q 022481 25 RRRHHCRCCGRTLC 38 (296)
Q Consensus 25 ~r~hhCr~Cg~~~C 38 (296)
.+.+.|..||+.|-
T Consensus 9 ~~~~~C~~C~k~f~ 22 (42)
T 2epc_A 9 ETPYLCGQCGKSFT 22 (42)
T ss_dssp SCCEECSSSCCEES
T ss_pred CCCeECCCCCcccC
Confidence 34567777777773
No 381
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.48 E-value=35 Score=18.91 Aligned_cols=14 Identities=21% Similarity=0.728 Sum_probs=10.2
Q ss_pred ccccccccccceEc
Q 022481 25 RRRHHCRCCGRTLC 38 (296)
Q Consensus 25 ~r~hhCr~Cg~~~C 38 (296)
.+.+.|..||+.|-
T Consensus 10 ~k~~~C~~C~k~f~ 23 (46)
T 2eow_A 10 EKPYKCNECGKAFR 23 (46)
T ss_dssp CCCEECTTSCCEES
T ss_pred CCCeeccccCChhc
Confidence 45677888888774
No 382
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=20.47 E-value=26 Score=23.48 Aligned_cols=29 Identities=17% Similarity=0.524 Sum_probs=18.9
Q ss_pred ccccccc--cccccccc------------ccccccc--cccceEc
Q 022481 10 EATRCDV--CKCSFNTF------------RRRHHCR--CCGRTLC 38 (296)
Q Consensus 10 ~~~~C~~--C~~~f~~~------------~r~hhCr--~Cg~~~C 38 (296)
..-.|.. |++.|... .+.+.|. .||+.|-
T Consensus 14 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~ 58 (100)
T 2ebt_A 14 RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFA 58 (100)
T ss_dssp CCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEES
T ss_pred cceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccC
Confidence 4567886 99999621 1445675 4777763
No 383
>2vut_I AREA, nitrogen regulatory protein AREA; transcription regulation, protein-protein interactions, metal-binding, nitrate assimilation; HET: NAD; 2.3A {Emericella nidulans} SCOP: g.39.1.1 PDB: 2vus_I* 2vuu_I*
Probab=20.28 E-value=46 Score=19.44 Aligned_cols=32 Identities=13% Similarity=0.135 Sum_probs=16.2
Q ss_pred cCCCCCCceecCCCCCCCceeccccchhhhccc
Q 022481 38 CHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRT 70 (296)
Q Consensus 38 C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~ 70 (296)
|..|....-++-+.|...+ -+|+.|--.+...
T Consensus 4 C~~C~tt~Tp~WR~gp~G~-~LCNaCGl~~k~~ 35 (43)
T 2vut_I 4 CTNCFTQTTPLWRRNPEGQ-PLCNACGLFLKLH 35 (43)
T ss_dssp CSSSCCCCCSCCEECTTSC-EECHHHHHHHHHH
T ss_pred CCccCCCCCCccccCCCCC-cccHHHHHHHHHh
Confidence 4444444333333333333 6788887665544
No 384
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=20.06 E-value=61 Score=23.22 Aligned_cols=30 Identities=13% Similarity=0.099 Sum_probs=17.7
Q ss_pred eEcCCCCCCceecCCCCCCCceeccccchh
Q 022481 36 TLCHEHSSDQMTLPQFGIHTNVRVCADCFN 65 (296)
Q Consensus 36 ~~C~~c~~~~~~~~~~~~~~~~rvC~~C~~ 65 (296)
-||..|.+--.+....+.....-+|..|--
T Consensus 5 ~FCp~Cgn~L~~~~~~~~~~~~~~C~~C~y 34 (113)
T 3h0g_I 5 QYCIECNNMLYPREDKVDRVLRLACRNCDY 34 (113)
T ss_dssp CCCSSSCCCCEECCCTTTCCCCEECSSSCC
T ss_pred eeCcCCCCEeeEcccCCCCeeEEECCCCCC
Confidence 478888765433322222355778888854
No 385
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.05 E-value=39 Score=18.72 Aligned_cols=14 Identities=21% Similarity=0.762 Sum_probs=9.8
Q ss_pred ccccccccccceEc
Q 022481 25 RRRHHCRCCGRTLC 38 (296)
Q Consensus 25 ~r~hhCr~Cg~~~C 38 (296)
.+.+.|..||+.|-
T Consensus 10 ~~~~~C~~C~k~f~ 23 (46)
T 2yrj_A 10 EKPYRCGECGKAFA 23 (46)
T ss_dssp CCCEECSSSCCEES
T ss_pred CCCeECCCCCCccC
Confidence 35677888888773
Done!