Query 022490
Match_columns 296
No_of_seqs 176 out of 2044
Neff 5.4
Searched_HMMs 46136
Date Fri Mar 29 03:56:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022490.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022490hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02541 uracil phosphoribosyl 100.0 1.6E-45 3.4E-50 339.1 23.5 204 93-296 6-211 (244)
2 COG0035 Upp Uracil phosphoribo 100.0 4.4E-45 9.5E-50 327.8 19.5 176 117-296 2-177 (210)
3 PF14681 UPRTase: Uracil phosp 100.0 1.7E-42 3.7E-47 311.3 18.6 175 121-296 1-175 (207)
4 TIGR01091 upp uracil phosphori 100.0 3E-40 6.6E-45 296.8 22.2 173 119-296 2-174 (207)
5 PRK00129 upp uracil phosphorib 100.0 1E-39 2.2E-44 293.6 21.9 175 117-296 2-176 (209)
6 KOG1017 Predicted uracil phosp 100.0 2.9E-29 6.4E-34 223.7 12.7 175 118-296 68-243 (267)
7 KOG4203 Armadillo/beta-Catenin 99.8 1.3E-20 2.7E-25 188.3 5.4 176 116-295 264-439 (473)
8 TIGR01203 HGPRTase hypoxanthin 99.6 4.8E-14 1E-18 123.0 15.0 120 140-287 4-127 (166)
9 PLN02369 ribose-phosphate pyro 99.5 1.3E-13 2.9E-18 130.9 15.9 144 115-295 110-255 (302)
10 PRK03092 ribose-phosphate pyro 99.5 6.7E-13 1.5E-17 126.2 15.6 143 115-293 108-252 (304)
11 PRK05205 bifunctional pyrimidi 99.5 2E-13 4.3E-18 119.8 10.7 118 140-283 8-135 (176)
12 PTZ00271 hypoxanthine-guanine 99.5 7.5E-13 1.6E-17 120.2 14.5 125 140-287 29-161 (211)
13 PRK15423 hypoxanthine phosphor 99.5 1.2E-12 2.6E-17 115.8 14.3 122 140-288 10-136 (178)
14 COG0634 Hpt Hypoxanthine-guani 99.4 7.2E-13 1.6E-17 116.8 10.8 122 140-289 13-138 (178)
15 PTZ00149 hypoxanthine phosphor 99.4 6.9E-12 1.5E-16 116.0 13.0 121 138-287 57-193 (241)
16 KOG1712 Adenine phosphoribosyl 99.3 6.1E-13 1.3E-17 115.8 4.2 142 126-292 27-172 (183)
17 PLN02238 hypoxanthine phosphor 99.3 3.5E-11 7.6E-16 107.3 14.5 121 140-288 13-141 (189)
18 PRK09162 hypoxanthine-guanine 99.3 1.5E-10 3.3E-15 102.2 14.9 123 136-286 14-139 (181)
19 PRK02812 ribose-phosphate pyro 99.2 1.1E-10 2.3E-15 112.5 13.1 139 115-292 140-280 (330)
20 PRK01259 ribose-phosphate pyro 99.2 1.1E-10 2.4E-15 111.3 12.7 142 115-296 119-262 (309)
21 COG0462 PrsA Phosphoribosylpyr 99.2 1.4E-10 3.1E-15 110.6 12.9 141 115-293 123-265 (314)
22 PF00156 Pribosyltran: Phospho 99.2 1.1E-10 2.3E-15 94.8 9.2 88 191-281 31-125 (125)
23 PRK04923 ribose-phosphate pyro 99.2 4.5E-10 9.8E-15 107.7 14.1 140 115-292 126-267 (319)
24 PRK02458 ribose-phosphate pyro 99.2 3.9E-10 8.5E-15 108.3 13.2 139 115-292 128-268 (323)
25 PRK06827 phosphoribosylpyropho 99.2 7.8E-10 1.7E-14 108.5 15.2 150 115-295 161-316 (382)
26 TIGR01251 ribP_PPkin ribose-ph 99.1 1.1E-09 2.3E-14 104.4 14.8 140 115-293 120-261 (308)
27 PRK00934 ribose-phosphate pyro 99.1 9.3E-10 2E-14 103.8 13.9 98 189-293 156-255 (285)
28 PRK02269 ribose-phosphate pyro 99.1 8.6E-10 1.9E-14 105.7 13.2 144 114-293 123-268 (320)
29 PRK07199 phosphoribosylpyropho 99.0 3.5E-09 7.6E-14 100.8 13.8 139 115-293 119-262 (301)
30 COG2065 PyrR Pyrimidine operon 99.0 5E-09 1.1E-13 91.8 11.8 118 140-283 8-136 (179)
31 PRK00553 ribose-phosphate pyro 98.9 1.7E-08 3.7E-13 97.4 14.5 140 115-293 128-269 (332)
32 PRK09177 xanthine-guanine phos 98.9 4.8E-09 1.1E-13 90.9 9.0 88 189-287 33-122 (156)
33 TIGR01090 apt adenine phosphor 98.9 7E-09 1.5E-13 90.4 9.9 101 190-295 49-162 (169)
34 COG2236 Predicted phosphoribos 98.9 5.8E-09 1.3E-13 93.7 9.5 81 188-270 30-115 (192)
35 PLN02293 adenine phosphoribosy 98.9 6.4E-08 1.4E-12 86.4 15.9 53 238-292 121-175 (187)
36 KOG3367 Hypoxanthine-guanine p 98.9 4.4E-09 9.6E-14 92.9 8.0 96 187-285 60-166 (216)
37 PTZ00145 phosphoribosylpyropho 98.8 7.5E-08 1.6E-12 95.9 14.3 140 115-293 238-386 (439)
38 PRK02304 adenine phosphoribosy 98.8 3.3E-08 7.2E-13 86.5 10.0 95 190-291 54-163 (175)
39 PRK02277 orotate phosphoribosy 98.8 5.2E-08 1.1E-12 87.5 10.4 96 190-290 88-185 (200)
40 TIGR01367 pyrE_Therm orotate p 98.7 4.8E-08 1E-12 87.0 9.6 88 190-287 61-148 (187)
41 PRK00455 pyrE orotate phosphor 98.7 1.6E-07 3.6E-12 84.0 11.2 91 190-289 67-158 (202)
42 TIGR00336 pyrE orotate phospho 98.7 2.3E-07 5E-12 81.3 11.2 98 190-293 57-159 (173)
43 PRK07322 adenine phosphoribosy 98.6 1.3E-07 2.9E-12 83.3 9.2 95 190-288 55-164 (178)
44 PF14572 Pribosyl_synth: Phosp 98.6 5.4E-08 1.2E-12 86.9 5.8 55 235-292 77-133 (184)
45 PRK13812 orotate phosphoribosy 98.6 5.1E-07 1.1E-11 79.8 10.7 94 190-292 61-156 (176)
46 PRK13811 orotate phosphoribosy 98.6 5E-07 1.1E-11 79.3 10.5 92 190-291 59-152 (170)
47 PRK06031 phosphoribosyltransfe 98.5 6.4E-07 1.4E-11 82.7 11.0 101 190-293 87-204 (233)
48 PRK08558 adenine phosphoribosy 98.5 9.8E-07 2.1E-11 81.5 11.9 99 189-294 113-227 (238)
49 COG0503 Apt Adenine/guanine ph 98.5 8.1E-07 1.8E-11 78.7 8.9 56 238-293 112-167 (179)
50 PLN02297 ribose-phosphate pyro 98.4 1.5E-06 3.2E-11 83.9 11.0 55 235-292 224-280 (326)
51 PRK13809 orotate phosphoribosy 98.4 2.8E-06 6E-11 77.1 10.8 94 191-292 71-167 (206)
52 PLN02440 amidophosphoribosyltr 98.4 1.5E-06 3.2E-11 87.7 9.2 89 190-281 278-377 (479)
53 TIGR00201 comF comF family pro 98.3 1E-06 2.3E-11 78.0 5.6 40 238-280 149-188 (190)
54 TIGR01744 XPRTase xanthine pho 98.3 4E-06 8.8E-11 75.1 9.0 52 239-292 114-167 (191)
55 PRK12560 adenine phosphoribosy 98.3 6.5E-06 1.4E-10 73.4 10.2 50 241-292 113-164 (187)
56 PRK11595 DNA utilization prote 98.2 2E-06 4.4E-11 78.4 6.2 44 236-282 182-225 (227)
57 PRK13810 orotate phosphoribosy 98.2 1E-05 2.2E-10 72.3 10.4 93 191-292 77-171 (187)
58 KOG1448 Ribose-phosphate pyrop 98.2 2.7E-06 5.9E-11 80.8 7.0 140 115-293 122-265 (316)
59 PRK05793 amidophosphoribosyltr 98.2 5.8E-06 1.3E-10 83.3 9.6 85 190-279 291-388 (469)
60 PRK09123 amidophosphoribosyltr 98.2 8E-06 1.7E-10 82.6 10.0 87 190-279 298-395 (479)
61 PRK09219 xanthine phosphoribos 98.2 2.8E-06 6.1E-11 76.0 5.7 52 239-292 114-167 (189)
62 COG1926 Predicted phosphoribos 98.2 4.2E-06 9.1E-11 76.2 6.6 55 236-293 119-173 (220)
63 COG1040 ComFC Predicted amidop 98.1 5.4E-06 1.2E-10 76.0 6.1 49 234-284 176-224 (225)
64 PRK08525 amidophosphoribosyltr 98.1 1.6E-05 3.5E-10 79.6 9.7 42 235-279 334-375 (445)
65 PRK09246 amidophosphoribosyltr 98.1 1.5E-05 3.2E-10 80.9 9.3 88 190-280 296-394 (501)
66 TIGR01743 purR_Bsub pur operon 98.1 1.6E-05 3.5E-10 74.9 8.8 52 238-291 190-241 (268)
67 PRK08341 amidophosphoribosyltr 98.1 1.5E-05 3.3E-10 79.8 8.9 87 190-279 274-369 (442)
68 COG0461 PyrE Orotate phosphori 98.0 4.2E-05 9.2E-10 69.3 9.9 51 241-293 111-161 (201)
69 PRK09213 pur operon repressor; 98.0 2.6E-05 5.7E-10 73.6 8.7 52 238-291 192-243 (271)
70 COG0856 Orotate phosphoribosyl 97.9 3.9E-05 8.5E-10 68.3 7.5 97 190-291 89-187 (203)
71 PRK07349 amidophosphoribosyltr 97.8 6.7E-05 1.5E-09 76.3 9.4 85 190-277 315-410 (500)
72 PRK05500 bifunctional orotidin 97.8 0.0001 2.2E-09 74.7 10.3 94 190-292 347-442 (477)
73 TIGR01134 purF amidophosphorib 97.7 6E-05 1.3E-09 75.5 6.5 42 236-280 333-374 (442)
74 PRK07272 amidophosphoribosyltr 97.7 7E-05 1.5E-09 75.9 6.8 42 236-280 345-386 (484)
75 PRK06781 amidophosphoribosyltr 97.7 0.00015 3.2E-09 73.4 8.2 40 235-277 342-381 (471)
76 PRK07631 amidophosphoribosyltr 97.6 0.00017 3.6E-09 73.1 8.1 40 236-278 343-382 (475)
77 PRK07847 amidophosphoribosyltr 97.6 0.00022 4.8E-09 72.7 8.9 40 235-277 361-400 (510)
78 PRK06388 amidophosphoribosyltr 97.4 0.00031 6.7E-09 71.1 6.1 40 235-277 350-389 (474)
79 COG0034 PurF Glutamine phospho 96.4 0.0024 5.2E-08 64.2 3.0 45 232-279 339-383 (470)
80 PF15609 PRTase_2: Phosphoribo 96.4 0.011 2.4E-07 53.3 6.9 46 238-284 117-162 (191)
81 KOG0572 Glutamine phosphoribos 95.6 0.0065 1.4E-07 60.1 2.3 76 196-277 312-389 (474)
82 KOG1503 Phosphoribosylpyrophos 93.3 0.11 2.5E-06 48.9 4.4 40 237-279 243-282 (354)
83 PF15610 PRTase_3: PRTase ComF 84.9 1.5 3.3E-05 41.7 4.9 33 238-271 135-167 (274)
84 PF01488 Shikimate_DH: Shikima 71.3 15 0.00033 30.5 6.4 48 238-294 9-56 (135)
85 PF13793 Pribosyltran_N: N-ter 67.5 69 0.0015 26.4 9.7 77 195-279 6-86 (116)
86 PRK02812 ribose-phosphate pyro 66.6 56 0.0012 31.9 10.1 89 183-280 16-108 (330)
87 smart00450 RHOD Rhodanese Homo 64.0 19 0.00041 26.4 5.1 45 241-295 55-99 (100)
88 PRK02269 ribose-phosphate pyro 57.0 1.1E+02 0.0024 29.6 10.2 84 188-280 5-92 (320)
89 PRK00553 ribose-phosphate pyro 56.8 1E+02 0.0022 30.0 10.0 85 187-280 8-96 (332)
90 PRK04923 ribose-phosphate pyro 54.9 1.2E+02 0.0026 29.4 10.1 84 188-280 6-93 (319)
91 PTZ00145 phosphoribosylpyropho 49.9 1.3E+02 0.0027 30.8 9.7 85 187-280 118-206 (439)
92 TIGR01251 ribP_PPkin ribose-ph 46.9 1.7E+02 0.0037 27.9 9.7 78 195-280 6-88 (308)
93 PRK02458 ribose-phosphate pyro 46.5 2E+02 0.0044 27.8 10.2 85 187-280 8-96 (323)
94 TIGR01809 Shik-DH-AROM shikima 43.2 68 0.0015 30.1 6.3 48 238-294 122-169 (282)
95 COG0462 PrsA Phosphoribosylpyr 42.9 1.5E+02 0.0033 29.0 8.6 78 195-280 10-91 (314)
96 PLN02297 ribose-phosphate pyro 42.7 3.3E+02 0.0073 26.6 11.4 87 187-280 15-104 (326)
97 PF01555 N6_N4_Mtase: DNA meth 42.5 17 0.00037 31.4 2.0 19 245-263 193-211 (231)
98 PRK07199 phosphoribosylpyropho 40.6 2.4E+02 0.0052 27.0 9.7 77 195-279 8-87 (301)
99 PRK06827 phosphoribosylpyropho 40.1 2.5E+02 0.0053 28.1 9.9 84 188-280 8-130 (382)
100 cd01453 vWA_transcription_fact 37.9 90 0.0019 27.3 5.9 49 242-293 108-157 (183)
101 PRK00934 ribose-phosphate pyro 37.3 2.2E+02 0.0049 26.8 8.8 77 195-279 5-84 (285)
102 PF10662 PduV-EutP: Ethanolami 37.0 58 0.0013 28.1 4.4 41 250-293 100-140 (143)
103 cd00158 RHOD Rhodanese Homolog 36.7 72 0.0016 23.0 4.4 32 241-277 49-80 (89)
104 cd01529 4RHOD_Repeats Member o 36.3 71 0.0015 24.2 4.4 32 241-277 55-86 (96)
105 PRK01259 ribose-phosphate pyro 35.7 3E+02 0.0065 26.4 9.5 78 195-280 6-87 (309)
106 PRK12749 quinate/shikimate deh 34.1 93 0.002 29.5 5.7 50 238-294 121-171 (288)
107 cd01444 GlpE_ST GlpE sulfurtra 33.3 61 0.0013 24.2 3.6 31 241-276 55-85 (96)
108 PF11181 YflT: Heat induced st 33.2 64 0.0014 25.7 3.8 38 252-291 6-43 (103)
109 COG0784 CheY FOG: CheY-like re 31.0 2E+02 0.0043 22.0 6.3 44 242-293 5-49 (130)
110 PRK03092 ribose-phosphate pyro 29.1 2.4E+02 0.0052 27.0 7.6 63 211-280 10-76 (304)
111 PRK00258 aroE shikimate 5-dehy 27.7 2E+02 0.0043 26.8 6.7 48 238-294 120-167 (278)
112 PLN02369 ribose-phosphate pyro 27.3 3.2E+02 0.0069 26.2 8.1 72 201-280 3-78 (302)
113 PF09861 DUF2088: Domain of un 26.6 1.5E+02 0.0033 26.8 5.5 42 242-283 55-99 (204)
114 PRK14027 quinate/shikimate deh 26.5 1.4E+02 0.003 28.3 5.4 46 238-292 124-169 (283)
115 COG0169 AroE Shikimate 5-dehyd 26.3 1.4E+02 0.0031 28.5 5.5 50 237-295 122-171 (283)
116 PF12852 Cupin_6: Cupin 25.6 87 0.0019 27.0 3.6 43 122-164 142-185 (186)
117 cd00606 fungal_RNase fungal ty 24.6 36 0.00078 27.9 0.9 18 4-21 51-69 (100)
118 PRK11524 putative methyltransf 24.1 52 0.0011 30.8 2.1 20 245-264 210-229 (284)
119 PRK13940 glutamyl-tRNA reducta 23.2 1.7E+02 0.0037 29.4 5.6 50 237-295 177-226 (414)
120 PRK00676 hemA glutamyl-tRNA re 21.4 1.7E+02 0.0036 28.8 5.0 36 237-279 170-205 (338)
121 smart00002 PLP Myelin proteoli 21.2 35 0.00077 25.5 0.2 9 2-10 31-39 (60)
122 PF14502 HTH_41: Helix-turn-he 21.0 1.4E+02 0.0029 21.4 3.1 17 254-270 19-35 (48)
123 cd01518 RHOD_YceA Member of th 20.7 2E+02 0.0044 21.9 4.5 30 242-276 61-90 (101)
No 1
>PLN02541 uracil phosphoribosyltransferase
Probab=100.00 E-value=1.6e-45 Score=339.11 Aligned_cols=204 Identities=71% Similarity=1.145 Sum_probs=184.3
Q ss_pred cccceeeeee--ccccccccCCCCCccEEEeCCchhHHHHHhhhccCCCChHHHHHHHHHHHHHHHHHHhccCCCCccce
Q 022490 93 TPRRSYVTVR--SHMATEEKSISGDRMLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGE 170 (296)
Q Consensus 93 ~~~r~~~~~~--~~~~~~~~~~~~~~~~v~v~~~P~i~~llTiLRD~~T~~~~Fr~~l~rL~rlL~eEAl~~~Lp~~~~~ 170 (296)
++|.++-+|. ..+++|..|....+|.+++++||++++++|+|||++|+..+||++++||+++|+|||+++|+|+++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~lt~LRd~~T~~~~Fr~~~~rl~~lL~~Ea~~~~lp~~~~~ 85 (244)
T PLN02541 6 SSRLTRTVRASADAAASEPSPKAPQQMLVFVPPHPLIKHWLSVLRNEQTPPPIFRSAMAELGRLLIYEASRDWLPTMTGE 85 (244)
T ss_pred CCcceeeecccccccccCCCCcccccceEEecCChHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHhccCCccceE
Confidence 3454554442 34566777666667889999999999999999999999999999999999999999999999999999
Q ss_pred eecCCccceeEeeCCCCCEEEEEecCcchHHHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcC
Q 022490 171 IQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDP 250 (296)
Q Consensus 171 V~TP~G~~~~~~i~~~~~iviV~ILRaGl~m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDD 250 (296)
|+||+|.+.+..+...+++|+|+|||+|++|++++++++|++++|+++++||+.+.++++||.++|.++.++++|||+||
T Consensus 86 V~TP~g~~~~~~~~~~~~i~~V~ILRAGl~m~~g~~~~~P~a~vg~i~~~rd~~t~e~~~yy~kLP~~i~~~~~VlllDp 165 (244)
T PLN02541 86 VQTPMGVADVEFIDPREPVAVVPILRAGLVLLEHASSVLPATKTYHLGFVRDEETLQPSMYLNKLPDKFPEGSRVLVVDP 165 (244)
T ss_pred EECCCCeEEEEeecCCCcEEEEeEeCCcHhHHHHHHhhCCCCeeEEEEEEEcccccceEEeeccCchhcCCCCEEEEECc
Confidence 99999976666555334599999999999999999999999999999999999999999999999999965689999999
Q ss_pred cccchHHHHHHHHHHHHcCCCCccEEEEEEeeChHHHHHHHHhcCC
Q 022490 251 MLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFHG 296 (296)
Q Consensus 251 mLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas~~Gle~l~~~fP~ 296 (296)
|||||+|+.+|++.|+++|+++++|.+++++++++|++++.++||+
T Consensus 166 mLATGgS~~~ai~~L~~~Gv~~~~I~~v~~ias~~Gl~~i~~~fP~ 211 (244)
T PLN02541 166 MLATGGTIVAAIDELVSRGASVEQIRVVCAVAAPPALKKLSEKFPG 211 (244)
T ss_pred chhhhHHHHHHHHHHHHcCCCcccEEEEEEEECHHHHHHHHHHCcC
Confidence 9999999999999999999988899999999999999999999996
No 2
>COG0035 Upp Uracil phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=100.00 E-value=4.4e-45 Score=327.76 Aligned_cols=176 Identities=45% Similarity=0.749 Sum_probs=168.3
Q ss_pred cEEEeCCchhHHHHHhhhccCCCChHHHHHHHHHHHHHHHHHHhccCCCCccceeecCCccceeEeeCCCCCEEEEEecC
Q 022490 117 MLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILR 196 (296)
Q Consensus 117 ~~v~v~~~P~i~~llTiLRD~~T~~~~Fr~~l~rL~rlL~eEAl~~~Lp~~~~~V~TP~G~~~~~~i~~~~~iviV~ILR 196 (296)
|.+++.+||++++++|+|||++|+..+||++++|++++|+|||+++ +|+++.+|+||.+...+..+. ++++|+|||||
T Consensus 2 ~~v~vi~hpli~~~lt~lRdk~t~~~~Fr~~~~ei~~lL~yEa~~~-l~~e~~~ieTP~~~~~~~~~~-~~~i~~V~ILR 79 (210)
T COG0035 2 MNVYVIDHPLVKHKLTILRDKNTGTKEFRELLDEIGRLLAYEATRD-LPLEKVEIETPLGPTEGVQIA-GKKIVIVPILR 79 (210)
T ss_pred CceEEeCcHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhCc-CceeEEEEECCCcceeeeeec-CCcEEEEEEee
Confidence 6789999999999999999999999999999999999999999999 999999999999977667665 35599999999
Q ss_pred cchHHHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEE
Q 022490 197 AGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIK 276 (296)
Q Consensus 197 aGl~m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~ 276 (296)
||++|.+++.+++|.+++|+|++|||++|++++.||.|||++++ ++.|+|+|||+|||+|+.+|++.|+++| .+++|+
T Consensus 80 AGl~m~~gl~~~~P~a~vG~ig~~Rdeet~~p~~yy~KLP~~~~-~~~viv~DPMLATG~s~i~ai~~L~~~G-~~~~I~ 157 (210)
T COG0035 80 AGLGMVEGLLKLIPSARVGHIGIYRDEETLEPVLYYEKLPEDID-ERTVIVLDPMLATGGSAIAAIDLLKKRG-GPKNIK 157 (210)
T ss_pred ccccHHHHHHHhCCcceEEEEEEEecCccCceehhHHhCCCccc-CCeEEEECchhhccHhHHHHHHHHHHhC-CCceEE
Confidence 99999999999999999999999999999999999999999998 8999999999999999999999999997 669999
Q ss_pred EEEEeeChHHHHHHHHhcCC
Q 022490 277 VISAVAAPPALQKLSENFHG 296 (296)
Q Consensus 277 v~~lIas~~Gle~l~~~fP~ 296 (296)
++|++++++|++++.++|||
T Consensus 158 ~v~~vAapeGi~~v~~~~p~ 177 (210)
T COG0035 158 VVSLVAAPEGIKAVEKAHPD 177 (210)
T ss_pred EEEEEecHHHHHHHHHhCCC
Confidence 99999999999999999996
No 3
>PF14681 UPRTase: Uracil phosphoribosyltransferase; PDB: 1V9S_B 1UPF_A 1UPU_D 1JLR_B 1BD4_A 1BD3_C 1JLS_D 1XTV_C 1XTU_H 3G6W_C ....
Probab=100.00 E-value=1.7e-42 Score=311.34 Aligned_cols=175 Identities=42% Similarity=0.770 Sum_probs=159.5
Q ss_pred eCCchhHHHHHhhhccCCCChHHHHHHHHHHHHHHHHHHhccCCCCccceeecCCccceeEeeCCCCCEEEEEecCcchH
Q 022490 121 VPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLV 200 (296)
Q Consensus 121 v~~~P~i~~llTiLRD~~T~~~~Fr~~l~rL~rlL~eEAl~~~Lp~~~~~V~TP~G~~~~~~i~~~~~iviV~ILRaGl~ 200 (296)
|++||++++++|+|||++|+..+||++++|++++|+|||+++|+|+++.+|+||+|......+..++++|+|+|||+|++
T Consensus 1 V~~~p~~~~~lt~LRd~~t~~~~Fr~~~~rl~~lL~~eal~~~l~~~~~~v~Tp~g~~~~g~~~~~~~i~~V~IlRaG~~ 80 (207)
T PF14681_consen 1 VPQHPLLRHLLTILRDRNTSRAEFRRYLDRLGRLLAEEALADWLPYEEVEVETPLGHKYGGVILNEDKICIVPILRAGLP 80 (207)
T ss_dssp EEB-HHHHHHHHHHHSTTS-HHHHHHHHHHHHHHHHHHHTTT-S-EEEEEEEESSSEEEEEEECSSGCEEEEEETTTHHH
T ss_pred CCCCHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHhccccceeEEEEcCCCcEEEEEEeecccEEEEEEeCCcHH
Confidence 57999999999999999999999999999999999999999889999999999999765445543448999999999999
Q ss_pred HHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEE
Q 022490 201 LVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISA 280 (296)
Q Consensus 201 m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~l 280 (296)
|++++++++|++++|+|+++|++.+.+++.||.+||.+++ +++|||+|||+|||+|+.+|++.|+++|+.+++|+++++
T Consensus 81 m~~~~~~~~p~a~~g~i~i~r~~~t~~p~~~y~~LP~~i~-~~~VillDpmlaTG~s~~~ai~~L~~~G~~~~~I~~v~~ 159 (207)
T PF14681_consen 81 MLEGFREVFPDARVGHIGIQRDEETLEPVLYYNKLPEDIE-NRKVILLDPMLATGGSAIAAIEILKEHGVPEENIIIVSV 159 (207)
T ss_dssp HHHHHHHHSTTSEEEEEEEEEETTTSSEEEEEEE--TTGT-TSEEEEEESEESSSHHHHHHHHHHHHTTG-GGEEEEEEE
T ss_pred HHHHHHHhCCCcceEEEEEEEcCCccceeeeHhhCCCCcc-CCEEEEEeccccchhhHHHHHHHHHHcCCCcceEEEEEE
Confidence 9999999999999999999999999999999999999996 899999999999999999999999999999999999999
Q ss_pred eeChHHHHHHHHhcCC
Q 022490 281 VAAPPALQKLSENFHG 296 (296)
Q Consensus 281 Ias~~Gle~l~~~fP~ 296 (296)
+++++|++++.++||+
T Consensus 160 ias~~Gl~~l~~~~P~ 175 (207)
T PF14681_consen 160 IASPEGLERLLKAFPD 175 (207)
T ss_dssp EEEHHHHHHHHHHSTT
T ss_pred EecHHHHHHHHHhCCC
Confidence 9999999999999996
No 4
>TIGR01091 upp uracil phosphoribosyltransferase. that includes uracil phosphoribosyltransferase, uridine kinases, and other, uncharacterized proteins.
Probab=100.00 E-value=3e-40 Score=296.76 Aligned_cols=173 Identities=45% Similarity=0.712 Sum_probs=164.1
Q ss_pred EEeCCchhHHHHHhhhccCCCChHHHHHHHHHHHHHHHHHHhccCCCCccceeecCCccceeEeeCCCCCEEEEEecCcc
Q 022490 119 VFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAG 198 (296)
Q Consensus 119 v~v~~~P~i~~llTiLRD~~T~~~~Fr~~l~rL~rlL~eEAl~~~Lp~~~~~V~TP~G~~~~~~i~~~~~iviV~ILRaG 198 (296)
+|+.+||++++++|+|||++|+..+||++++||+++|+|||+++ +|+++.+|+||+|.+.+..+. ++++++|+|||||
T Consensus 2 v~~~~~p~~~~~lt~lRd~~t~~~~Fr~~~~rl~~~l~~ea~~~-l~~~~~~v~tp~g~~~~~~~~-~~~i~~V~ILrgg 79 (207)
T TIGR01091 2 VVVIEHPLIKHKLTLLRDKNTDTKEFRELLRELGRLLAYEATRD-LELEEVEVETPLGETEGGRIL-GKKIVLVPILRAG 79 (207)
T ss_pred eEecCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHhcc-CCceeEEEECCCCcEEEeEec-CCcEEEEEEeCCc
Confidence 67888999999999999999999999999999999999999996 999999999999987777765 3569999999999
Q ss_pred hHHHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEE
Q 022490 199 LVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVI 278 (296)
Q Consensus 199 l~m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~ 278 (296)
++|++++++.+|.+++|++.+||++.+.+++.+|.++|.+++ |++|||+|||+|||+|+.+|++.|+++|+ ++|+++
T Consensus 80 ~~~~~~l~~~l~~~~v~~i~~~r~~~t~~~~~~~~~lp~~i~-~~~VllvDd~laTG~Tl~~ai~~L~~~G~--~~I~v~ 156 (207)
T TIGR01091 80 LGMVDGVLKLIPEAKVGHVGAYRNEETLKPVPYYSKLPEDID-ERTVIVLDPMLATGGTMIAALDLLKKRGA--KKIKVL 156 (207)
T ss_pred HHHHHHHHHhCCcCceeEEEEEeCCCCCCCEEEEecCCCCCC-CCEEEEECCCccchHHHHHHHHHHHHcCC--CEEEEE
Confidence 999999999999999999999999888899999999999997 99999999999999999999999999998 689999
Q ss_pred EEeeChHHHHHHHHhcCC
Q 022490 279 SAVAAPPALQKLSENFHG 296 (296)
Q Consensus 279 ~lIas~~Gle~l~~~fP~ 296 (296)
+++++++|++++.++||+
T Consensus 157 ~ll~~~~gl~~l~~~~p~ 174 (207)
T TIGR01091 157 SIVAAPEGIEAVEKAHPD 174 (207)
T ss_pred EEecCHHHHHHHHHHCCC
Confidence 999999999999999996
No 5
>PRK00129 upp uracil phosphoribosyltransferase; Reviewed
Probab=100.00 E-value=1e-39 Score=293.57 Aligned_cols=175 Identities=45% Similarity=0.748 Sum_probs=165.6
Q ss_pred cEEEeCCchhHHHHHhhhccCCCChHHHHHHHHHHHHHHHHHHhccCCCCccceeecCCccceeEeeCCCCCEEEEEecC
Q 022490 117 MLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILR 196 (296)
Q Consensus 117 ~~v~v~~~P~i~~llTiLRD~~T~~~~Fr~~l~rL~rlL~eEAl~~~Lp~~~~~V~TP~G~~~~~~i~~~~~iviV~ILR 196 (296)
|.+|+.+||++++++|+|||++|+..+||++++||+++|+|||+++ +|+++.+|+||+|.+.+..+. ++++++|+|||
T Consensus 2 ~~v~~~~~p~~~~~lt~lRd~~t~~~~fr~~~~rl~~~l~~eal~~-l~~~~~~v~tp~g~~~g~~~~-~~~~vvV~Ilr 79 (209)
T PRK00129 2 MKVHVVDHPLIQHKLTLLRDKNTSTKRFRELLEELGRLLAYEATRD-LPLEEVEIETPLGKTTGKRIA-GKKLVIVPILR 79 (209)
T ss_pred CceEecCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHhcc-cceeEEEEECCCCcEEEEEec-CCeEEEEEEeC
Confidence 6789999999999999999999999999999999999999999998 999999999999977676665 35799999999
Q ss_pred cchHHHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEE
Q 022490 197 AGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIK 276 (296)
Q Consensus 197 aGl~m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~ 276 (296)
||++|++++.+.+|.+++|++.+||++.+.+++.++.++|.+++ |++|||+|||+|||+|+.+|++.|+++|+ ++|+
T Consensus 80 gG~~~~~~l~~~l~~~~~~~i~~~r~~~t~~~~~~~~~lp~~i~-~~~VllvDd~laTG~Tl~~ai~~L~~~G~--~~I~ 156 (209)
T PRK00129 80 AGLGMVDGVLKLIPSARVGHIGLYRDEETLEPVEYYVKLPEDID-ERTVIVVDPMLATGGSAIAAIDLLKKRGA--KNIK 156 (209)
T ss_pred CCHHHHHHHHHhCCcCeeeeEEEEeCCCCCCCEEEEeeCCCcCC-CCEEEEECCcccchHHHHHHHHHHHHcCC--CEEE
Confidence 99999999999999999999999999878888889999999997 99999999999999999999999999996 7999
Q ss_pred EEEEeeChHHHHHHHHhcCC
Q 022490 277 VISAVAAPPALQKLSENFHG 296 (296)
Q Consensus 277 v~~lIas~~Gle~l~~~fP~ 296 (296)
+++++++++|++++.++||+
T Consensus 157 ~~~ll~~~~gl~~l~~~~p~ 176 (209)
T PRK00129 157 VLCLVAAPEGIKALEEAHPD 176 (209)
T ss_pred EEEEecCHHHHHHHHHHCCC
Confidence 99999999999999999996
No 6
>KOG1017 consensus Predicted uracil phosphoribosyltransferase [General function prediction only]
Probab=99.96 E-value=2.9e-29 Score=223.68 Aligned_cols=175 Identities=21% Similarity=0.348 Sum_probs=161.6
Q ss_pred EEEeCCchhHHHHHhhhccCCCChHHHHHHHHHHHHHHHHHHhccCCCCccceeecCCcc-ceeEeeCCCCCEEEEEecC
Q 022490 118 LVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGV-ASVEFIDPREPVAVIPILR 196 (296)
Q Consensus 118 ~v~v~~~P~i~~llTiLRD~~T~~~~Fr~~l~rL~rlL~eEAl~~~Lp~~~~~V~TP~G~-~~~~~i~~~~~iviV~ILR 196 (296)
+.+++=+.++..++|++||+.|+..+|.++++||+|+++||-++. |||.+.+|+||.|. +.|-.++ +.-|+|+|.|
T Consensus 68 lkll~~n~q~~el~ti~Rdkst~rsDF~F~ADRLiRLViEE~LNq-LPytec~VtTPTG~kYEGikf~--~GNCGVSi~R 144 (267)
T KOG1017|consen 68 LKLLECNSQVAELLTILRDKSTNRSDFVFNADRLIRLVIEECLNQ-LPYTECTVTTPTGFKYEGIKFN--RGNCGVSICR 144 (267)
T ss_pred cchhhhHHHHHHHHHHHhhccCcccceeecHHHHHHHHHHHHhhc-CCccceeeecCCcceeeceeec--CCCcceEEEe
Confidence 345566778999999999999999999999999999999999997 99999999999995 4444544 3349999999
Q ss_pred cchHHHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEE
Q 022490 197 AGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIK 276 (296)
Q Consensus 197 aGl~m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~ 276 (296)
+|..|..++++.+-..++|+|.++.|..|.+..++|.++|+||. .++|||+-|++.||+|++.|+++|+++|+++++|+
T Consensus 145 SGEAMEqgLRdCCRsIRIGKILi~sd~~t~~akV~YArfppDI~-sR~VLLmYPi~stGnTV~~Av~VL~EhgVp~s~Ii 223 (267)
T KOG1017|consen 145 SGEAMEQGLRDCCRSIRIGKILIGSDQNTHEAKVLYARFPPDIT-SRRVLLMYPIISTGNTVCKAVEVLKEHGVPDSNII 223 (267)
T ss_pred chHHHHHHHHHHHHHheeeeEEeccccccceeeEEEEecCCccc-ceeEEEEeeeecCCccHHHHHHHHHHcCCCcccEE
Confidence 99999999999988899999999999999999999999999998 79999999999999999999999999999999999
Q ss_pred EEEEeeChHHHHHHHHhcCC
Q 022490 277 VISAVAAPPALQKLSENFHG 296 (296)
Q Consensus 277 v~~lIas~~Gle~l~~~fP~ 296 (296)
+++++.+|-|.+.+..+||.
T Consensus 224 L~sLF~tP~gak~i~~~fP~ 243 (267)
T KOG1017|consen 224 LVSLFITPTGAKNITRKFPY 243 (267)
T ss_pred EEEeeecchhhHHHHHhCCe
Confidence 99999999999999999994
No 7
>KOG4203 consensus Armadillo/beta-Catenin/plakoglobin [Signal transduction mechanisms; Cytoskeleton]
Probab=99.81 E-value=1.3e-20 Score=188.30 Aligned_cols=176 Identities=25% Similarity=0.378 Sum_probs=161.4
Q ss_pred ccEEEeCCchhHHHHHhhhccCCCChHHHHHHHHHHHHHHHHHHhccCCCCccceeecCCccceeEeeCCCCCEEEEEec
Q 022490 116 RMLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPIL 195 (296)
Q Consensus 116 ~~~v~v~~~P~i~~llTiLRD~~T~~~~Fr~~l~rL~rlL~eEAl~~~Lp~~~~~V~TP~G~~~~~~i~~~~~iviV~IL 195 (296)
+....++++++++++++.+||+.|.+.+|.++.++++|++.+++... +|+.+..+.+|.|.+...... ..++|+|+++
T Consensus 264 ~~~~~l~~t~~i~~~~t~~~~~~Ts~~~~~~~~~~~vrl~l~~~~~~-~p~~~~~i~~~~~~~~~~~~~-~~~i~gv~i~ 341 (473)
T KOG4203|consen 264 NNVLSLPDTNQIKGKLTLLRDHTTSRHPFSFYSDHLVRLVLEHGLGH-LPYTEKRIVTPRGLAYSGVNF-CKQICGVSIP 341 (473)
T ss_pred ccceecCCccccCCceeEeecCCcCCCCHHHHHHHHHHHHhhcccCc-ccceeeeEecccccchhcccc-cchhccCCCC
Confidence 34448999999999999999999999999999999999888888864 999999999999854333222 2568999999
Q ss_pred CcchHHHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccE
Q 022490 196 RAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQI 275 (296)
Q Consensus 196 RaGl~m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I 275 (296)
|+|..|+..+++.+++.++|+|..+|++.+.+++++|.++|.++. .. |+++|++++||+++.+|++.|.++|+.+++|
T Consensus 342 r~g~~~~~alr~~~~~vri~~il~qr~~~t~~~~l~~~~lP~~is-~~-V~ll~p~~~tg~~~~~a~~~ll~~gv~~~~i 419 (473)
T KOG4203|consen 342 RSGESMETALRAACKGVRIGKILIQRDEETGEPELHYEKLPKDIS-DR-VLLLDPVLATGNSAMMAIILLLDHGVPEENI 419 (473)
T ss_pred cchhHHHHHHHHHcCCceeeeeEeechhhccchhhhhhhCccccc-cc-eeeecchhhcchhHHHHHHHHHhCCCcHHHh
Confidence 999999999999999999999999999999999999999999997 45 9999999999999999999999999999999
Q ss_pred EEEEEeeChHHHHHHHHhcC
Q 022490 276 KVISAVAAPPALQKLSENFH 295 (296)
Q Consensus 276 ~v~~lIas~~Gle~l~~~fP 295 (296)
.+++++++++|++++..+||
T Consensus 420 ~~~~ll~~~~~~~~~~~~f~ 439 (473)
T KOG4203|consen 420 IFLNLLAAPQGIHEVAYAFP 439 (473)
T ss_pred HHHHHHhhhhhhhHHHHhcc
Confidence 99999999999999999998
No 8
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase. Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.
Probab=99.58 E-value=4.8e-14 Score=122.99 Aligned_cols=120 Identities=17% Similarity=0.324 Sum_probs=93.6
Q ss_pred ChHHHHHHHHHHHHHHHHHHhccCCCCccceeecCCccceeEeeCCCCCEEEEEecCcchHHHHHHHccCC-CceeEEEE
Q 022490 140 PCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILP-AIKTYHLG 218 (296)
Q Consensus 140 ~~~~Fr~~l~rL~rlL~eEAl~~~Lp~~~~~V~TP~G~~~~~~i~~~~~iviV~ILRaGl~m~~~l~k~lP-~a~ig~I~ 218 (296)
+..++.+.+.+|++.+.. + . . ++++++|+++|||++|++.+.+.++ ...++++.
T Consensus 4 s~~~i~~~i~~lA~~I~~----~-~-------------------~-~~~~vvv~i~~GG~~~a~~l~~~L~~~~~v~~i~ 58 (166)
T TIGR01203 4 PEEQIKARIAELAKQITE----D-Y-------------------A-GKPLVLLCVLKGSFPFFADLIRYIAVPVQVDFMA 58 (166)
T ss_pred CHHHHHHHHHHHHHHHHH----H-c-------------------C-CCCeEEEEEccCCHHHHHHHHHhcCCCceeeEEE
Confidence 356777778887766542 2 1 1 1347899999999999999999887 46777777
Q ss_pred E--eecC-CCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeChHHH
Q 022490 219 I--SRDE-ETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPAL 287 (296)
Q Consensus 219 i--~rd~-~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas~~Gl 287 (296)
+ |++. .+.+...++.+++.+++ ||+|||||||++||+|+.++++.|++.|+ ++|++++++.++.+.
T Consensus 59 ~~~Y~~~~~~~~~~~~~~~~~~~~~-gk~vlivDDii~TG~Tl~~~~~~l~~~g~--~~i~~~~l~~k~~~~ 127 (166)
T TIGR01203 59 VSSYGNGMQSSGDVKILKDLDLSIK-GKDVLIVEDIVDTGLTLQYLLDLLKARKP--KSLKIVTLLDKPSRR 127 (166)
T ss_pred EeeccCCCcccCceEEecCCCCCCC-CCEEEEEeeeeCcHHHHHHHHHHHHHCCC--CEEEEEEEEecCccC
Confidence 6 4643 33333344567888897 99999999999999999999999999998 689999999988774
No 9
>PLN02369 ribose-phosphate pyrophosphokinase
Probab=99.55 E-value=1.3e-13 Score=130.90 Aligned_cols=144 Identities=19% Similarity=0.264 Sum_probs=114.4
Q ss_pred CccEEEeCCchhHHHHHhhhccCCCChHHHHHHHHHHHHHHHHHHhccCCCCccceeecCCccceeEeeCCCCCEEEEEe
Q 022490 115 DRMLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPI 194 (296)
Q Consensus 115 ~~~~v~v~~~P~i~~llTiLRD~~T~~~~Fr~~l~rL~rlL~eEAl~~~Lp~~~~~V~TP~G~~~~~~i~~~~~iviV~I 194 (296)
++...+-+|.+++++++.+.-++....+.|..++.+. . +. .+++++|++
T Consensus 110 d~vi~vDlHs~~i~~~F~ip~~~l~~~~~~~~~i~~~----------~--------------------~~-~~~~vvVsp 158 (302)
T PLN02369 110 DRVLACDLHSGQSMGYFDIPVDHVYGQPVILDYLASK----------T--------------------IS-SPDLVVVSP 158 (302)
T ss_pred CEEEEEECCchHHhhccCCceecccchHHHHHHHHHh----------C--------------------CC-CCceEEEEE
Confidence 5667778899999999987666666666655544320 0 10 134789999
Q ss_pred cCcchHHHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCcc
Q 022490 195 LRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQ 274 (296)
Q Consensus 195 LRaGl~m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~ 274 (296)
.++|+.+++++.+.+++++++.+..+|+...... ..+++++++ |++|||||||++||+|+.+|++.|++.|+ ++
T Consensus 159 d~gg~~~a~~~a~~l~~~~~~~l~k~R~~~~~~~---~~~~~~~v~-g~~viivDDii~TG~Tl~~a~~~l~~~Ga--~~ 232 (302)
T PLN02369 159 DVGGVARARAFAKKLSDAPLAIVDKRRQGHNVAE---VMNLIGDVK-GKVAIMVDDMIDTAGTITKGAALLHQEGA--RE 232 (302)
T ss_pred CcChHHHHHHHHHHcCCCCEEEEEEecCCcceee---eEecCCCCC-CCEEEEEcCcccchHHHHHHHHHHHhCCC--CE
Confidence 9999999999999898899999999886543221 246788897 99999999999999999999999999998 67
Q ss_pred EEEEE--EeeChHHHHHHHHhcC
Q 022490 275 IKVIS--AVAAPPALQKLSENFH 295 (296)
Q Consensus 275 I~v~~--lIas~~Gle~l~~~fP 295 (296)
|.+++ .+++++|++++.+...
T Consensus 233 v~~~~tH~v~~~~a~~~l~~~~~ 255 (302)
T PLN02369 233 VYACATHAVFSPPAIERLSSGLF 255 (302)
T ss_pred EEEEEEeeeeCHHHHHHHHhCCC
Confidence 88888 6999999999987543
No 10
>PRK03092 ribose-phosphate pyrophosphokinase; Provisional
Probab=99.49 E-value=6.7e-13 Score=126.23 Aligned_cols=143 Identities=20% Similarity=0.309 Sum_probs=111.9
Q ss_pred CccEEEeCCchhHHHHHhhhccCCCChHHHHHHHHHHHHHHHHHHhccCCCCccceeecCCccceeEeeCCCCCEEEEEe
Q 022490 115 DRMLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPI 194 (296)
Q Consensus 115 ~~~~v~v~~~P~i~~llTiLRD~~T~~~~Fr~~l~rL~rlL~eEAl~~~Lp~~~~~V~TP~G~~~~~~i~~~~~iviV~I 194 (296)
++...+-+|.+++++++.+.-+.....+.|..++.. + . . .+++++|+.
T Consensus 108 d~vitvD~H~~~~~~~f~~p~~~l~~~~~la~~i~~-----------~-~-------------------~-~~~~vvVsp 155 (304)
T PRK03092 108 DRIMTVDLHTAQIQGFFDGPVDHLFAMPLLADYVRD-----------K-Y-------------------D-LDNVTVVSP 155 (304)
T ss_pred CeEEEEecChHHHHhhcCCCeeeEechHHHHHHHHH-----------h-c-------------------C-CCCcEEEEe
Confidence 567777889999999998766655555544444322 1 0 0 134678999
Q ss_pred cCcchHHHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCcc
Q 022490 195 LRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQ 274 (296)
Q Consensus 195 LRaGl~m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~ 274 (296)
..||+.++..+.+.++.++++++..+|+..+.+. ....+++++++ ||+|||||||++||+|+.+|++.|+++|+ ++
T Consensus 156 d~Ga~~~a~~la~~L~~~~~~~i~k~R~~~~~~~-~~~~~~~~dv~-gr~viIVDDIi~TG~Tl~~aa~~Lk~~Ga--~~ 231 (304)
T PRK03092 156 DAGRVRVAEQWADRLGGAPLAFIHKTRDPTVPNQ-VVANRVVGDVE-GRTCVLVDDMIDTGGTIAGAVRALKEAGA--KD 231 (304)
T ss_pred cCchHHHHHHHHHHcCCCCEEEEEEEcccCCCCc-eEEEecCcCCC-CCEEEEEccccCcHHHHHHHHHHHHhcCC--Ce
Confidence 9999999999999887678999998887543222 22567788997 99999999999999999999999999999 68
Q ss_pred EEEEEE--eeChHHHHHHHHh
Q 022490 275 IKVISA--VAAPPALQKLSEN 293 (296)
Q Consensus 275 I~v~~l--Ias~~Gle~l~~~ 293 (296)
|.+++. +.++++.+++.+.
T Consensus 232 I~~~~tH~v~~~~a~~~l~~~ 252 (304)
T PRK03092 232 VIIAATHGVLSGPAAERLKNC 252 (304)
T ss_pred EEEEEEcccCChHHHHHHHHC
Confidence 988885 8889999999864
No 11
>PRK05205 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; Provisional
Probab=99.48 E-value=2e-13 Score=119.79 Aligned_cols=118 Identities=22% Similarity=0.357 Sum_probs=88.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHhccCCCCccceeecCCccceeEeeCCCCCEEEEEecCcchHHHHHHHccCCC-----cee
Q 022490 140 PCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPA-----IKT 214 (296)
Q Consensus 140 ~~~~Fr~~l~rL~rlL~eEAl~~~Lp~~~~~V~TP~G~~~~~~i~~~~~iviV~ILRaGl~m~~~l~k~lP~-----a~i 214 (296)
+..++...+.+|++.+.. + . . . . +++++|+++++|+.|+..+.+.++. .++
T Consensus 8 s~~~i~~~i~~la~~i~~----~-~-------------~--~-~---~~~viv~il~gG~~~a~~La~~L~~~~~~~~~~ 63 (176)
T PRK05205 8 DAEALRRALTRIAHEIIE----R-N-------------K--G-L---DNLVLVGIKTRGVWLAERLAERLEQLEGVDVPV 63 (176)
T ss_pred CHHHHHHHHHHHHHHHHH----H-c-------------C--C-C---CCeEEEEEccCCHHHHHHHHHHHHHHcCCCCcc
Confidence 457788888887776642 1 0 0 0 1 3578999999999999999888852 346
Q ss_pred EEEE--EeecCCC--C-cceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeC
Q 022490 215 YHLG--ISRDEET--L-QPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAA 283 (296)
Q Consensus 215 g~I~--i~rd~~t--~-e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas 283 (296)
+++. .|++... . .....+.+++.++. |++|||||||+|||+|+.++++.|+++|++ ++|.+++++..
T Consensus 64 ~~l~~~~y~~~~~~~~~~~~~~~~~l~~~v~-gr~VLIVDDIidTG~Tl~~~~~~L~~~G~~-~~v~~avL~~K 135 (176)
T PRK05205 64 GELDITLYRDDLTKKGLHPQVKPTDIPFDIE-GKRVILVDDVLYTGRTIRAALDALFDYGRP-ARVQLAVLVDR 135 (176)
T ss_pred ceEEEEEeecCccccCcccccccccCCCCCC-CCEEEEEecccCcHHHHHHHHHHHHhcCCC-cEEEEEEEEEC
Confidence 7754 4676432 2 23333466788897 999999999999999999999999999953 78999999875
No 12
>PTZ00271 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=99.48 E-value=7.5e-13 Score=120.18 Aligned_cols=125 Identities=12% Similarity=0.193 Sum_probs=94.6
Q ss_pred ChHHHHHHHHHHHHHHHHHHhccCCCCccceeecCCccceeEeeCCCCCEEEEEecCcchHHHHHHHccCC----CceeE
Q 022490 140 PCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILP----AIKTY 215 (296)
Q Consensus 140 ~~~~Fr~~l~rL~rlL~eEAl~~~Lp~~~~~V~TP~G~~~~~~i~~~~~iviV~ILRaGl~m~~~l~k~lP----~a~ig 215 (296)
+..++...+++|++.+.+.. ++ + .+.+++++++|+|||||++|+..|.+.+. ..+++
T Consensus 29 s~e~I~~~i~~LA~~I~~~~-~~-~-----------------~~~~~~~~vivgVlkGg~~fa~dL~r~L~~~~~~~~vd 89 (211)
T PTZ00271 29 TQEQVWAATAKCAKKIAEDY-RS-F-----------------KLTTENPLYLLCVLKGSFIFTADLARFLADEGVPVKVE 89 (211)
T ss_pred CHHHHHHHHHHHHHHHHHHh-hh-c-----------------cccCCCCeEEEEEcCCCHHHHHHHHHHhcccCCCeeEE
Confidence 46788899999988776432 11 0 01112467899999999999999987764 24677
Q ss_pred EEEE--eecC-C-CCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeChHHH
Q 022490 216 HLGI--SRDE-E-TLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPAL 287 (296)
Q Consensus 216 ~I~i--~rd~-~-t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas~~Gl 287 (296)
++.+ |++. . ++++ .....++.+++ ||+|||||||++||.||.++++.|+++|+ ++|++++++.++.+.
T Consensus 90 fi~vssY~~~~~s~g~~-~i~~~~~~~i~-gk~VLIVDDIvDTG~TL~~v~~~l~~~~p--~svk~avL~dK~~~r 161 (211)
T PTZ00271 90 FICASSYGTGVETSGQV-RMLLDVRDSVE-NRHILIVEDIVDSAITLQYLMRFMLAKKP--ASLKTVVLLDKPSGR 161 (211)
T ss_pred EEEEEecCCCCcccCce-EEecCCCCCCC-CCEEEEEecccCCHHHHHHHHHHHHhcCC--CEEEEEEEEEcccCC
Confidence 7665 7643 2 2333 23456777897 99999999999999999999999999987 799999999988764
No 13
>PRK15423 hypoxanthine phosphoribosyltransferase; Provisional
Probab=99.47 E-value=1.2e-12 Score=115.76 Aligned_cols=122 Identities=16% Similarity=0.278 Sum_probs=93.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHhccCCCCccceeecCCccceeEeeCCCCCEEEEEecCcchHHHHHHHccCCC-ceeEEEE
Q 022490 140 PCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPA-IKTYHLG 218 (296)
Q Consensus 140 ~~~~Fr~~l~rL~rlL~eEAl~~~Lp~~~~~V~TP~G~~~~~~i~~~~~iviV~ILRaGl~m~~~l~k~lP~-a~ig~I~ 218 (296)
+..++...++++++.+.+.. ++ . ++++++|+|++||+.|+..+.+.+.- ..++++.
T Consensus 10 ~~~~i~~~i~~lA~~I~~~~-~~--------------------~--~~~~vvvgI~~Gg~~fa~~L~~~L~~~~~v~~l~ 66 (178)
T PRK15423 10 PEAEIKARIAELGRQITERY-KD--------------------S--GSDMVLVGLLRGSFMFMADLCREVQVSHEVDFMT 66 (178)
T ss_pred CHHHHHHHHHHHHHHHHHHh-cc--------------------c--CCCeEEEEEecCChHHHHHHHHHhCCCcceeEEE
Confidence 46788899999888775421 11 0 23478999999999999999988754 4566665
Q ss_pred E--eecCC--CCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeChHHHH
Q 022490 219 I--SRDEE--TLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQ 288 (296)
Q Consensus 219 i--~rd~~--t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas~~Gle 288 (296)
+ |++.. +.+. .....++.+++ ||+|||||||++||.||.++.+.|+++|+ +++++++++.++.+.+
T Consensus 67 ~ssY~~~~~~~~~v-~i~~~~~~~v~-gk~VLlVDDIiDTG~TL~~l~~~l~~~~~--~~v~~avL~~K~~~r~ 136 (178)
T PRK15423 67 ASSYGSGMSTTRDV-KILKDLDEDIR-GKDVLIVEDIIDSGNTLSKVREILSLREP--KSLAICTLLDKPSRRE 136 (178)
T ss_pred EEEecCCCcccCce-EEecCCCCCCC-CCEEEEEeeecCchHHHHHHHHHHHhCCC--CEEEEEEEEECCCCCc
Confidence 5 66432 2332 33455677897 99999999999999999999999999998 7899999999887643
No 14
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=99.44 E-value=7.2e-13 Score=116.76 Aligned_cols=122 Identities=15% Similarity=0.264 Sum_probs=96.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHhccCCCCccceeecCCccceeEeeCCCCCEEEEEecCcchHHHHHHHccCCC-ceeEEEE
Q 022490 140 PCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPA-IKTYHLG 218 (296)
Q Consensus 140 ~~~~Fr~~l~rL~rlL~eEAl~~~Lp~~~~~V~TP~G~~~~~~i~~~~~iviV~ILRaGl~m~~~l~k~lP~-a~ig~I~ 218 (296)
+..+....+.++++++.+ + +. ++++++|+||+|+++|+.+|.+.+.- .++.|+.
T Consensus 13 see~I~~ri~ela~~I~~----~--------------------y~-g~~~~vv~iLkGs~~F~~dL~r~i~~~~e~dFm~ 67 (178)
T COG0634 13 SEEQIKARIKELAAQITE----D--------------------YG-GKDPLVVGVLKGSFPFMADLIRAIDFPLEVDFMH 67 (178)
T ss_pred CHHHHHHHHHHHHHHHHH----h--------------------hC-CCceEEEEEcccchhhHHHHHHhcCCCceeEEEE
Confidence 356677777777766543 2 11 24678999999999999999887763 6777776
Q ss_pred E--eecCCC-CcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeChHHHHH
Q 022490 219 I--SRDEET-LQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQK 289 (296)
Q Consensus 219 i--~rd~~t-~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas~~Gle~ 289 (296)
+ |++..+ .+.+....++..+++ ||+|||||||++||.||.++.+.|+.+|+ +++.+++++.++.+.+.
T Consensus 68 vSSYg~~t~ssg~v~i~kDld~di~-grdVLiVeDIiDsG~TLs~i~~~l~~r~a--~sv~i~tLldK~~~r~~ 138 (178)
T COG0634 68 VSSYGGGTSSSGEVKILKDLDEDIK-GRDVLIVEDIIDSGLTLSKVRDLLKERGA--KSVRIATLLDKPERRKV 138 (178)
T ss_pred EeccCCCcccCCceEEecccccCCC-CCeEEEEecccccChhHHHHHHHHHhCCC--CeEEEEEEeeCcccccC
Confidence 6 766543 343455677888998 99999999999999999999999999998 78999999999987653
No 15
>PTZ00149 hypoxanthine phosphoribosyltransferase; Provisional
Probab=99.37 E-value=6.9e-12 Score=115.97 Aligned_cols=121 Identities=15% Similarity=0.195 Sum_probs=90.7
Q ss_pred CCChHHHHHHHHHHHHHHHHHHhccCCCCccceeecCCccceeEeeCCCCCEEEEEecCcchHHHHHHHccCCC------
Q 022490 138 QTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPA------ 211 (296)
Q Consensus 138 ~T~~~~Fr~~l~rL~rlL~eEAl~~~Lp~~~~~V~TP~G~~~~~~i~~~~~iviV~ILRaGl~m~~~l~k~lP~------ 211 (296)
.-+..+.+..+++|++.+.+ + . . ++++++++||+||+.|+.+|.+.+..
T Consensus 57 Lis~~~I~~rI~~LA~~I~~----d-y-------------------~-~~~~vilgILkGg~~FaadL~~~L~~~~~~~~ 111 (241)
T PTZ00149 57 LLPNGLIKDRVEKLAYDIKQ----V-Y-------------------G-NEELHILCILKGSRGFFSALVDYLNRIHNYSS 111 (241)
T ss_pred EeCHHHHHHHHHHHHHHHHH----H-c-------------------C-CCCeEEEEECCCCHHHHHHHHHHHhhhhhccc
Confidence 44678888888888876653 2 1 0 24578999999999999988776642
Q ss_pred ----cee---EEEEE--eecCC-CCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEe
Q 022490 212 ----IKT---YHLGI--SRDEE-TLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAV 281 (296)
Q Consensus 212 ----a~i---g~I~i--~rd~~-t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lI 281 (296)
.++ ++|.+ |++.. +++.... ...-.+++ ||+|||||||++||.|+.++++.|++.|+ ++|.+++++
T Consensus 112 ~~~~~~~~~~dfi~vsSY~~~~s~g~v~i~-~~~~~~l~-gk~VLIVDDIidTG~Tl~~~~~~L~~~g~--~~V~va~L~ 187 (241)
T PTZ00149 112 TESPKPPYQEHYVRVKSYCNDESTGKLEIV-SDDLSCLK-DKHVLIVEDIIDTGNTLVKFCEYLKKFEP--KTIRIATLF 187 (241)
T ss_pred cccCcccccccEEEEEEccCCCcCCceEEe-cccccccC-CCEEEEEEeEeChHHHHHHHHHHHHhcCC--CEEEEEEEE
Confidence 123 66665 77653 3444332 33334787 99999999999999999999999999998 789999999
Q ss_pred eChHHH
Q 022490 282 AAPPAL 287 (296)
Q Consensus 282 as~~Gl 287 (296)
.++.+.
T Consensus 188 ~K~~~r 193 (241)
T PTZ00149 188 EKRTPL 193 (241)
T ss_pred ecCccc
Confidence 887653
No 16
>KOG1712 consensus Adenine phosphoribosyl transferases [Nucleotide transport and metabolism]
Probab=99.34 E-value=6.1e-13 Score=115.80 Aligned_cols=142 Identities=24% Similarity=0.338 Sum_probs=106.4
Q ss_pred hHHHHHhhhccCCCChHHHHHHHHHHHHHHHHHHhccCCCCccceeecCCc-cceeEeeCCCCCEEEEEecCcchHHHHH
Q 022490 126 LIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMG-VASVEFIDPREPVAVIPILRAGLVLVEH 204 (296)
Q Consensus 126 ~i~~llTiLRD~~T~~~~Fr~~l~rL~rlL~eEAl~~~Lp~~~~~V~TP~G-~~~~~~i~~~~~iviV~ILRaGl~m~~~ 204 (296)
+++++++++.| +..|+..++-+...+-+.. +..|....| +++|.++. + .++--+++|++..++
T Consensus 27 ~F~Di~pll~d----P~af~~lidlf~~h~~~~~--------~~~Id~iaGlEaRGFLFG---P-~iAlalG~~fVPiRK 90 (183)
T KOG1712|consen 27 MFQDITPLLLD----PKAFKKLIDLFVDHYRETF--------EMKIDVIAGLEARGFLFG---P-SIALALGAGFVPIRK 90 (183)
T ss_pred ehhhhhhhhcC----HHHHHHHHHHHHHHHHHHh--------cCcceEEEeeeecceecC---c-HHHHHhCCCeeeccc
Confidence 47889999997 7889999888776553322 234555566 45666652 2 345557899999999
Q ss_pred HHccCCC---ceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEe
Q 022490 205 ASSILPA---IKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAV 281 (296)
Q Consensus 205 l~k~lP~---a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lI 281 (296)
-.| +|+ ...|.++|+.|.-+++. +.|++|.+|+||||++|||||+.+|.++|.+.|+..-+..++.-+
T Consensus 91 ~gK-LPG~~i~~~Y~lEYg~d~~Emq~--------~Ai~~g~rvvvVDDllATGGTl~AA~~Ll~r~ga~vvE~~~vieL 161 (183)
T KOG1712|consen 91 PGK-LPGEVISESYELEYGEDRFEMQK--------GAIKPGQRVVVVDDLLATGGTLAAATELLERVGAEVVECACVIEL 161 (183)
T ss_pred CCC-CCCceeEEEEeeecCccceeeec--------cccCCCCeEEEEechhhcCccHHHHHHHHHHhccEEEEEEEEEEc
Confidence 999 676 35667777777666655 467789999999999999999999999999999865444555567
Q ss_pred eChHHHHHHHH
Q 022490 282 AAPPALQKLSE 292 (296)
Q Consensus 282 as~~Gle~l~~ 292 (296)
...+|.++|..
T Consensus 162 ~~LkGr~kL~~ 172 (183)
T KOG1712|consen 162 PELKGREKLKG 172 (183)
T ss_pred cccCCccccCC
Confidence 78889988865
No 17
>PLN02238 hypoxanthine phosphoribosyltransferase
Probab=99.33 E-value=3.5e-11 Score=107.26 Aligned_cols=121 Identities=12% Similarity=0.179 Sum_probs=87.6
Q ss_pred ChHHHHHHHHHHHHHHHHHHhccCCCCccceeecCCccceeEeeCCCCCEEEEEecCcchHHHHHHHccCCC----ceeE
Q 022490 140 PCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPA----IKTY 215 (296)
Q Consensus 140 ~~~~Fr~~l~rL~rlL~eEAl~~~Lp~~~~~V~TP~G~~~~~~i~~~~~iviV~ILRaGl~m~~~l~k~lP~----a~ig 215 (296)
+..++...+.+|++.+.. + . . +++.++|++++||++|+..+.+.+.- ..+.
T Consensus 13 s~~~I~~~i~~lA~~I~~----~-~-------------------~-~~~~vivgi~~Gg~~fa~~L~~~L~~~~~~~~i~ 67 (189)
T PLN02238 13 TAEDISARVAELAAQIAS----D-Y-------------------A-GKSPVVLGVATGAFMFLADLVRAIQPLPRGLTVD 67 (189)
T ss_pred CHHHHHHHHHHHHHHHHH----H-c-------------------C-CCCcEEEEEccCCHHHHHHHHHHhCccCCCeEEE
Confidence 456778888887766642 1 0 0 12357999999999999999887652 4455
Q ss_pred EEEE--eecC--CCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeChHHHH
Q 022490 216 HLGI--SRDE--ETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQ 288 (296)
Q Consensus 216 ~I~i--~rd~--~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas~~Gle 288 (296)
++.. |.+. .++++......++.+++ |++||||||+++||.|+.++++.|++.|+ +.|.+++++..+.+.+
T Consensus 68 fi~~~sy~~~~~~~g~~~i~~~~~~~~v~-gk~VliVDDIidTG~Tl~~~~~~l~~~g~--~~v~~avL~dK~~~r~ 141 (189)
T PLN02238 68 FIRASSYGGGTESSGVAKVSGADLKIDVK-GKHVLLVEDIVDTGNTLSALVAHLEAKGA--ASVSVCALLDKRARRK 141 (189)
T ss_pred EEEeeecCCCccccCceeEecCCCCCCCC-CCEEEEEecccchHHHHHHHHHHHHhCCC--CEEEEEEEEECCcccc
Confidence 5554 3222 22344333325666787 99999999999999999999999999998 7899999988876443
No 18
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=99.26 E-value=1.5e-10 Score=102.23 Aligned_cols=123 Identities=20% Similarity=0.232 Sum_probs=88.0
Q ss_pred cCCCChHHHHHHHHHHHHHHHHHHhccCCCCccceeecCCccceeEeeCCCCCEEEEEecCcchHHHHHHHccCCC-cee
Q 022490 136 NEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPA-IKT 214 (296)
Q Consensus 136 D~~T~~~~Fr~~l~rL~rlL~eEAl~~~Lp~~~~~V~TP~G~~~~~~i~~~~~iviV~ILRaGl~m~~~l~k~lP~-a~i 214 (296)
+..-+..+|...+.++++.+... + . .++.++|+++++|+.++..+.+.+.- ...
T Consensus 14 ~~~~s~~~i~~~i~~la~~i~~~-----~-------------------~-~~~~viV~i~~gg~~~A~~La~~l~~~~~~ 68 (181)
T PRK09162 14 DCLVSAAEVEAAIDRMADEITAD-----L-------------------A-DENPLVLCVMGGGLVFTGQLLPRLDFPLEF 68 (181)
T ss_pred cEeecHHHHHHHHHHHHHHHHHH-----c-------------------C-CCCeEEEEECCCcHHHHHHHHHHcCCCccc
Confidence 44456778888888888777532 1 0 12247899999999999999987642 344
Q ss_pred EEEEEee--cCCCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeChHH
Q 022490 215 YHLGISR--DEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPA 286 (296)
Q Consensus 215 g~I~i~r--d~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas~~G 286 (296)
+.+...+ +..+.....+....+.+++ ||+||||||+++||.|+.++++.|++.|+ ++|.++++..++.+
T Consensus 69 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~-gk~VLIVDDIidTG~Tl~~~~~~Lk~~Ga--~~V~~avL~~k~~~ 139 (181)
T PRK09162 69 DYLHATRYRNETTGGELVWKVKPRESLK-GRTVLVVDDILDEGHTLAAIRDRCLEMGA--AEVYSAVLVDKTHD 139 (181)
T ss_pred CEEEEEecCCCccCCceeEecCCCCCCC-CCEEEEEccccCcHHHHHHHHHHHHhCCC--CEEEEEEEEEcCcc
Confidence 5554433 3322211222334455787 99999999999999999999999999998 78999988876554
No 19
>PRK02812 ribose-phosphate pyrophosphokinase; Provisional
Probab=99.23 E-value=1.1e-10 Score=112.54 Aligned_cols=139 Identities=22% Similarity=0.351 Sum_probs=106.5
Q ss_pred CccEEEeCCchhHHHHHhhhccCCCChHHHHHHHHHHHHHHHHHHhccCCCCccceeecCCccceeEeeCCCCCEEEEEe
Q 022490 115 DRMLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPI 194 (296)
Q Consensus 115 ~~~~v~v~~~P~i~~llTiLRD~~T~~~~Fr~~l~rL~rlL~eEAl~~~Lp~~~~~V~TP~G~~~~~~i~~~~~iviV~I 194 (296)
++...+-+|++++++++.+.-+.......|.+++.+ .+ + +++++|+.
T Consensus 140 d~vitvDlH~~~~~~fF~ipv~nl~~~~~l~~~i~~----------~~--------------------~---~~~vvVsP 186 (330)
T PRK02812 140 DRVLAMDLHSAQIQGYFDIPCDHVYGSPVLLDYLAS----------KN--------------------L---EDIVVVSP 186 (330)
T ss_pred CEEEEEECCchHHcCccCCCceeeeChHHHHHHHHh----------cC--------------------C---CCeEEEEE
Confidence 566777788999999987766655555555554322 01 1 24688999
Q ss_pred cCcchHHHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCcc
Q 022490 195 LRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQ 274 (296)
Q Consensus 195 LRaGl~m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~ 274 (296)
-.+|..++..+.+.+++.+.+.+.-.|...+.. ....++++++ |++|||||||++||+|+.+|++.|++.|+ ++
T Consensus 187 D~gg~~ra~~~A~~L~~~~~~~~~k~R~~~~~~---~~~~~~~~v~-g~~viiVDDii~TG~T~~~a~~~L~~~Ga--~~ 260 (330)
T PRK02812 187 DVGGVARARAFAKKLNDAPLAIIDKRRQAHNVA---EVLNVIGDVK-GKTAILVDDMIDTGGTICEGARLLRKEGA--KQ 260 (330)
T ss_pred CCccHHHHHHHHHHhCCCCEEEEEeeccCCcee---eeEeccccCC-CCEEEEEccccCcHHHHHHHHHHHhccCC--Ce
Confidence 999999999999988767777777666533221 1234566887 99999999999999999999999999998 68
Q ss_pred EEEEE--EeeChHHHHHHHH
Q 022490 275 IKVIS--AVAAPPALQKLSE 292 (296)
Q Consensus 275 I~v~~--lIas~~Gle~l~~ 292 (296)
|.+++ -+++.++++++.+
T Consensus 261 v~~~~tH~v~s~~a~~~l~~ 280 (330)
T PRK02812 261 VYACATHAVFSPPAIERLSS 280 (330)
T ss_pred EEEEEEcccCChHHHHHHhh
Confidence 88888 5889999999974
No 20
>PRK01259 ribose-phosphate pyrophosphokinase; Provisional
Probab=99.22 E-value=1.1e-10 Score=111.32 Aligned_cols=142 Identities=19% Similarity=0.271 Sum_probs=100.2
Q ss_pred CccEEEeCCchhHHHHHhhhccCCCChHHHHHHHHHHHHHHHHHHhccCCCCccceeecCCccceeEeeCCCCCEEEEEe
Q 022490 115 DRMLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPI 194 (296)
Q Consensus 115 ~~~~v~v~~~P~i~~llTiLRD~~T~~~~Fr~~l~rL~rlL~eEAl~~~Lp~~~~~V~TP~G~~~~~~i~~~~~iviV~I 194 (296)
++...+-+|.+++++++.+.-+.....+.+..++.+ ++ + ++.++|++
T Consensus 119 d~vitvD~H~~~~~~~f~~p~~~l~~~~~l~~~i~~----------~~--------------------~---~~~vvv~p 165 (309)
T PRK01259 119 DRVLTMDLHADQIQGFFDIPVDNLYGSPILLEDIKQ----------KN--------------------L---ENLVVVSP 165 (309)
T ss_pred CEEEEEcCChHHHcCcCCCCceeeeecHHHHHHHHh----------cC--------------------C---CCcEEEEE
Confidence 456666777888888876655544444444444322 01 1 34689999
Q ss_pred cCcchHHHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCcc
Q 022490 195 LRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQ 274 (296)
Q Consensus 195 LRaGl~m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~ 274 (296)
.+||+.++..+.+.+. .+...+.-.|..... .....+.++++ |++|+|||||++||+|+.++++.|+++|+ ++
T Consensus 166 d~Gg~~~A~~la~~Lg-~~~~~~~k~r~~~~~---~~~~~~~~~~~-g~~vliVDDii~TG~T~~~a~~~l~~~Ga--~~ 238 (309)
T PRK01259 166 DVGGVVRARALAKRLD-ADLAIIDKRRPRANV---SEVMNIIGDVE-GRDCILVDDMIDTAGTLCKAAEALKERGA--KS 238 (309)
T ss_pred CCCcHHHHHHHHHHhC-CCEEEEEeeccccee---EEEEeecccCC-CCEEEEEecccCcHHHHHHHHHHHHccCC--CE
Confidence 9999999999988774 555544433322111 11223456787 99999999999999999999999999998 67
Q ss_pred EEEEEE--eeChHHHHHHHHhcCC
Q 022490 275 IKVISA--VAAPPALQKLSENFHG 296 (296)
Q Consensus 275 I~v~~l--Ias~~Gle~l~~~fP~ 296 (296)
|.+++. +.++++.+++.+..++
T Consensus 239 v~~~~tH~i~~~~a~~~l~~~~~~ 262 (309)
T PRK01259 239 VYAYATHPVLSGGAIERIENSVID 262 (309)
T ss_pred EEEEEEeeeCChHHHHHHhcCCCC
Confidence 888885 8899999999876553
No 21
>COG0462 PrsA Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism]
Probab=99.21 E-value=1.4e-10 Score=110.59 Aligned_cols=141 Identities=21% Similarity=0.295 Sum_probs=103.5
Q ss_pred CccEEEeCCchhHHHHHhhhccCCCChHHHHHHHHHHHHHHHHHHhccCCCCccceeecCCccceeEeeCCCCCEEEEEe
Q 022490 115 DRMLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPI 194 (296)
Q Consensus 115 ~~~~v~v~~~P~i~~llTiLRD~~T~~~~Fr~~l~rL~rlL~eEAl~~~Lp~~~~~V~TP~G~~~~~~i~~~~~iviV~I 194 (296)
+++...-.|.+|+|+++.+..|.....+.|.+++.+.. .. ++.++|+=
T Consensus 123 drv~TvDlH~~qiqgfFdipvdnl~a~p~l~~~~~~~~------------~~--------------------~d~vVVSP 170 (314)
T COG0462 123 DRVLTVDLHAPQIQGFFDIPVDNLYAAPLLAEYIREKY------------DL--------------------DDPVVVSP 170 (314)
T ss_pred CeEEEEcCCchhhcccCCCccccccchHHHHHHHHHhc------------CC--------------------CCcEEECC
Confidence 56777788999999999999999888887777776620 11 11334444
Q ss_pred cCcchHHHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCcc
Q 022490 195 LRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQ 274 (296)
Q Consensus 195 LRaGl~m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~ 274 (296)
-.||..-++.+.+.+. +.+..|.-.|+ ... .+.-...+-++++ ||+|+|||||++||||+..|.++|+++|| ++
T Consensus 171 D~Ggv~RAr~~A~~L~-~~~a~i~K~R~-~~~-~~v~~~~~~gdV~-gk~~iiVDDiIdTgGTi~~Aa~~Lk~~GA--k~ 244 (314)
T COG0462 171 DKGGVKRARALADRLG-APLAIIDKRRD-SSP-NVVEVMNLIGDVE-GKDVVIVDDIIDTGGTIAKAAKALKERGA--KK 244 (314)
T ss_pred CccHHHHHHHHHHHhC-CCEEEEEEeec-CCC-CeEEEeecccccC-CCEEEEEeccccccHHHHHHHHHHHHCCC--Ce
Confidence 5677877788877664 34666766774 111 1122356678997 99999999999999999999999999999 78
Q ss_pred EEEEEE--eeChHHHHHHHHh
Q 022490 275 IKVISA--VAAPPALQKLSEN 293 (296)
Q Consensus 275 I~v~~l--Ias~~Gle~l~~~ 293 (296)
|++++. +.+....+++.+.
T Consensus 245 V~a~~tH~vfs~~a~~~l~~~ 265 (314)
T COG0462 245 VYAAATHGVFSGAALERLEAS 265 (314)
T ss_pred EEEEEEchhhChHHHHHHhcC
Confidence 988884 4457778877653
No 22
>PF00156 Pribosyltran: Phosphoribosyl transferase domain; InterPro: IPR000836 The name PRT comes from phosphoribosyltransferase (PRTase) enzymes, which carry out phosphoryl transfer reactions on 5-phosphoribosyl-alpha1-pyrophosphate PRPP, an activated form of ribose-5-phosphate. Members of Phosphoribosyltransferase (PRT) are catalytic and are regulatory proteins involved in nucleotide synthesis and salvage []. This includes a range of diverse phosphoribosyl transferase enzymes including adenine phosphoribosyltransferase (2.4.2.7 from EC); hypoxanthine-guanine-xanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase (2.4.2.8 from EC); ribose-phosphate pyrophosphokinase (2.7.6.1 from EC); amidophosphoribosyltransferase (2.4.2.14 from EC); orotate phosphoribosyltransferase (2.4.2.10 from EC);uracil phosphoribosyltransferase (2.4.2.9 from EC); and xanthine-guanine phosphoribosyltransferase (2.4.2.22 from EC). Not all PRT proteins are enzymes. For example, in some bacteria PRT proteins regulate the expression of purine and pyrimidine synthetic genes. Members of PRT are defined by the protein fold and by a short 13-residue sequence motif, The motif consists of four hydrophobic amino acids, two acidic amino acids and seven amino acids of variable character, usually including glycine and threonine. The motif has been predicted to be a PRPP-binding site in advance of structural information [, ]. Apart of this motif, different PRT proteins have a low level of sequence identity, less than 15%. The PRT sequence motif is only found in PRTases from the nucleotide synthesis and salvage pathways. Other PRTases, from the tryptophan, histidine and nicotinamide synthetic and salvage pathways, lack the PRT sequence motif and appear to be unrelated to each other and unrelated to the PRT family.; GO: 0009116 nucleoside metabolic process; PDB: 2JBH_A 1Y0B_D 2FXV_B 1GPH_1 1AO0_D 1ORO_B 1VCH_C 2WNS_A 2PRZ_B 2PS1_A ....
Probab=99.19 E-value=1.1e-10 Score=94.76 Aligned_cols=88 Identities=26% Similarity=0.366 Sum_probs=61.4
Q ss_pred EEEecCcchHHHHHHHccCCCceeEEEE-Ee------ecCCCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHH
Q 022490 191 VIPILRAGLVLVEHASSILPAIKTYHLG-IS------RDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALN 263 (296)
Q Consensus 191 iV~ILRaGl~m~~~l~k~lP~a~ig~I~-i~------rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~ 263 (296)
++++.++|++++..+.+.+......... .+ ......+....+......++ |++||||||+++||+|+..+++
T Consensus 31 ivgi~~~G~~~a~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gk~vliVDDvi~tG~Tl~~~~~ 109 (125)
T PF00156_consen 31 IVGIPRGGIPLAAALARALGIPLVFVRKRKSYYPGSDKTSREKNNQELFIIDKEDIK-GKRVLIVDDVIDTGGTLKEAIE 109 (125)
T ss_dssp EEEETTTTHHHHHHHHHHHTHEEEEEEEEEEEESEEEEEEEETEEEEEEEEESSSGT-TSEEEEEEEEESSSHHHHHHHH
T ss_pred EEeehhccHHHHHHHHHHhCCCccceeeeecccccchhhhhccCceEEeeccccccc-ceeEEEEeeeEcccHHHHHHHH
Confidence 8999999999999998876532111111 11 11111222223334455676 9999999999999999999999
Q ss_pred HHHHcCCCCccEEEEEEe
Q 022490 264 LVKECGVENKQIKVISAV 281 (296)
Q Consensus 264 ~Lk~~Ga~~k~I~v~~lI 281 (296)
.|+++|+ +.|.+++++
T Consensus 110 ~L~~~g~--~~v~~~vl~ 125 (125)
T PF00156_consen 110 LLKEAGA--KVVGVAVLV 125 (125)
T ss_dssp HHHHTTB--SEEEEEEEE
T ss_pred HHHhCCC--cEEEEEEEC
Confidence 9999998 567777664
No 23
>PRK04923 ribose-phosphate pyrophosphokinase; Provisional
Probab=99.17 E-value=4.5e-10 Score=107.70 Aligned_cols=140 Identities=16% Similarity=0.237 Sum_probs=101.5
Q ss_pred CccEEEeCCchhHHHHHhhhccCCCChHHHHHHHHHHHHHHHHHHhccCCCCccceeecCCccceeEeeCCCCCEEEEEe
Q 022490 115 DRMLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPI 194 (296)
Q Consensus 115 ~~~~v~v~~~P~i~~llTiLRD~~T~~~~Fr~~l~rL~rlL~eEAl~~~Lp~~~~~V~TP~G~~~~~~i~~~~~iviV~I 194 (296)
++...+-+|.+++++++.+.-+.......|..++.+ . . . . +++++|+.
T Consensus 126 d~vitvD~H~~~~~~~f~~p~~~l~~~~~l~~~i~~-----------~-~----------------~-~---~~~vVVsP 173 (319)
T PRK04923 126 DRVLTVDLHADQIQGFFDVPVDNVYASPLLLADIWR-----------A-Y----------------G-T---DNLIVVSP 173 (319)
T ss_pred CEEEEEeCChHHHHhhcCCCceeeeChHHHHHHHHH-----------h-c----------------C-C---CCCEEEEE
Confidence 567788889999999998776655444444333321 1 0 0 1 34578888
Q ss_pred cCcchHHHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCcc
Q 022490 195 LRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQ 274 (296)
Q Consensus 195 LRaGl~m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~ 274 (296)
..||..++..+.+.+..+++..+.-+|+..+... ...+.++++ ||+|||||||++||+|+.++++.|+++|+ ++
T Consensus 174 D~Ga~~rA~~lA~~L~~~~~~~~~K~R~~~~~~~---~~~~~gdv~-Gr~viIVDDIidTG~Tl~~aa~~Lk~~GA--~~ 247 (319)
T PRK04923 174 DVGGVVRARAVAKRLDDADLAIIDKRRPRANVAT---VMNIIGDVQ-GKTCVLVDDLVDTAGTLCAAAAALKQRGA--LK 247 (319)
T ss_pred CCchHHHHHHHHHHcCCCCEEEeccccCCCCceE---EEecccCCC-CCEEEEEecccCchHHHHHHHHHHHHCCC--CE
Confidence 9999999999998875455655555664322211 234456897 99999999999999999999999999999 67
Q ss_pred EEEEE--EeeChHHHHHHHH
Q 022490 275 IKVIS--AVAAPPALQKLSE 292 (296)
Q Consensus 275 I~v~~--lIas~~Gle~l~~ 292 (296)
|.+++ -+.+..+.+++.+
T Consensus 248 V~~~~THgvfs~~a~~~l~~ 267 (319)
T PRK04923 248 VVAYITHPVLSGPAVDNINN 267 (319)
T ss_pred EEEEEECcccCchHHHHHhh
Confidence 87777 4677888888865
No 24
>PRK02458 ribose-phosphate pyrophosphokinase; Provisional
Probab=99.16 E-value=3.9e-10 Score=108.28 Aligned_cols=139 Identities=17% Similarity=0.266 Sum_probs=101.2
Q ss_pred CccEEEeCCchhHHHHHhhhccCCCChHHHHHHHHHHHHHHHHHHhccCCCCccceeecCCccceeEeeCCCCCEEEEEe
Q 022490 115 DRMLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPI 194 (296)
Q Consensus 115 ~~~~v~v~~~P~i~~llTiLRD~~T~~~~Fr~~l~rL~rlL~eEAl~~~Lp~~~~~V~TP~G~~~~~~i~~~~~iviV~I 194 (296)
++...+-+|.+++++++.+.-|.....+.|..++.+. . ++ .+++++|+.
T Consensus 128 d~vitvD~H~~~i~~~F~~p~~nl~~~p~~~~~l~~~----------~--------------------~~-~~~~vvV~p 176 (323)
T PRK02458 128 DRVLTLDLHAVQVQGFFDIPVDNLFTVPLFAKHYCKK----------G--------------------LS-GSDVVVVSP 176 (323)
T ss_pred CeEEEEecCcHHhhccccCCceEEEEHHHHHHHHHHh----------C--------------------CC-CCceEEEEE
Confidence 5667777888999999987777666666665544320 1 11 134688999
Q ss_pred cCcchHHHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCcc
Q 022490 195 LRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQ 274 (296)
Q Consensus 195 LRaGl~m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~ 274 (296)
..||..++..+.+.+. .++..+...|.....+ ...+.++++ ||+|||||||++||+|+.+|.+.|++.|+ ++
T Consensus 177 d~Ga~~~A~~la~~L~-~~~~~~~~~r~~~~~~----~~~i~gdV~-gk~viIVDDIidTG~Tl~~aa~~Lk~~GA--~~ 248 (323)
T PRK02458 177 KNSGIKRARSLAEYLD-APIAIIDYAQDDSERE----EGYIIGDVA-GKKAILIDDILNTGKTFAEAAKIVEREGA--TE 248 (323)
T ss_pred CCChHHHHHHHHHHhC-CCEEEEEEecCCCcce----eeccccccC-CCEEEEEcceeCcHHHHHHHHHHHHhCCC--Cc
Confidence 9999999999988764 4554444433322211 123556897 99999999999999999999999999999 67
Q ss_pred EEEEE--EeeChHHHHHHHH
Q 022490 275 IKVIS--AVAAPPALQKLSE 292 (296)
Q Consensus 275 I~v~~--lIas~~Gle~l~~ 292 (296)
|.+++ -+.+..+.+++.+
T Consensus 249 V~~~~tHgif~~~a~~~l~~ 268 (323)
T PRK02458 249 IYAVASHGLFAGGAAEVLEN 268 (323)
T ss_pred EEEEEEChhcCchHHHHHhh
Confidence 88777 4677788888875
No 25
>PRK06827 phosphoribosylpyrophosphate synthetase; Provisional
Probab=99.15 E-value=7.8e-10 Score=108.45 Aligned_cols=150 Identities=22% Similarity=0.332 Sum_probs=102.8
Q ss_pred CccEEEeCCchhHHHHHhh-hccCCCChHHHHHHHHHHHHHHHHHHhccCCCCccceeecCCccceeEeeCCCCCEEEEE
Q 022490 115 DRMLVFVPPHPLIKHWVSI-LRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIP 193 (296)
Q Consensus 115 ~~~~v~v~~~P~i~~llTi-LRD~~T~~~~Fr~~l~rL~rlL~eEAl~~~Lp~~~~~V~TP~G~~~~~~i~~~~~iviV~ 193 (296)
++...+-+|.+++++++.+ .-+.......|..++.. + ..+ ++ .. .+++++|+
T Consensus 161 d~vitvDlHs~~i~~~F~~~pvdnl~a~~~l~~~i~~-------~-i~~-l~-----------------~d-~~~~VVVs 213 (382)
T PRK06827 161 DNIITFDAHDPRIENAIPLMGFENLYPSYQIIKALLK-------N-EKD-LE-----------------ID-KDHLMVIS 213 (382)
T ss_pred CeEEEecCChHHhcccCCCCCcCCcCchHHHHHHHHH-------h-ccc-cc-----------------cc-CCCcEEEE
Confidence 5667778889999999974 34555555555544422 0 001 00 01 13467888
Q ss_pred ecCcchHHHHHHHccCCCceeEEEEEeecCC---CC-cceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcC
Q 022490 194 ILRAGLVLVEHASSILPAIKTYHLGISRDEE---TL-QPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECG 269 (296)
Q Consensus 194 ILRaGl~m~~~l~k~lP~a~ig~I~i~rd~~---t~-e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~G 269 (296)
.-.||...+..+.+.+ +.+...+.-.|+.. ++ ....++..++.+++ ||+|||+|||++||+|+..|++.|+++|
T Consensus 214 PD~Gg~~rA~~~A~~L-g~~~ai~~K~R~~~~~~~g~~~~~~~~~~g~dV~-gr~vIIVDDII~TG~Tl~~aa~~Lk~~G 291 (382)
T PRK06827 214 PDTGAMDRAKYYASVL-GVDLGLFYKRRDYSRVVNGRNPIVAHEFLGRDVE-GKDVLIVDDMIASGGSMIDAAKELKSRG 291 (382)
T ss_pred ECccchHHHHHHHHHh-CCCEEEEEcccCCcccccCCCceEEEecCCcccC-CCEEEEEeCCcCcHHHHHHHHHHHHHcC
Confidence 8899998888887766 34555444444321 11 22344455565897 9999999999999999999999999999
Q ss_pred CCCccEEEEEEeeC-hHHHHHHHHhcC
Q 022490 270 VENKQIKVISAVAA-PPALQKLSENFH 295 (296)
Q Consensus 270 a~~k~I~v~~lIas-~~Gle~l~~~fP 295 (296)
+ ++|.+++..+. .+|++++.++|+
T Consensus 292 A--~~V~~~~tH~vf~~a~~~l~~~~~ 316 (382)
T PRK06827 292 A--KKIIVAATFGFFTNGLEKFDKAYE 316 (382)
T ss_pred C--CEEEEEEEeecChHHHHHHHhhcc
Confidence 9 67988886653 499999988765
No 26
>TIGR01251 ribP_PPkin ribose-phosphate pyrophosphokinase. In some systems, close homologs lacking enzymatic activity exist and perform regulatory functions. The model is designated subfamily rather than equivalog for this reason.
Probab=99.14 E-value=1.1e-09 Score=104.37 Aligned_cols=140 Identities=19% Similarity=0.340 Sum_probs=101.6
Q ss_pred CccEEEeCCchhHHHHHhhhccCCCChHHHHHHHHHHHHHHHHHHhccCCCCccceeecCCccceeEeeCCCCCEEEEEe
Q 022490 115 DRMLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPI 194 (296)
Q Consensus 115 ~~~~v~v~~~P~i~~llTiLRD~~T~~~~Fr~~l~rL~rlL~eEAl~~~Lp~~~~~V~TP~G~~~~~~i~~~~~iviV~I 194 (296)
++...+-+|++++++++.+.-+.......|.+++.+ . . . ++.++|+.
T Consensus 120 d~vit~DlHs~~~~~~f~ip~~~l~a~~~l~~~i~~-----------~-~------------------~---~~~viv~p 166 (308)
T TIGR01251 120 DRVLTVDLHSPQIQGFFDVPVDNLYASPVLAEYLKK-----------K-I------------------L---DNPVVVSP 166 (308)
T ss_pred CEEEEecCChHHhcCcCCCceecccCHHHHHHHHHh-----------h-C------------------C---CCCEEEEE
Confidence 556777778889999887644443333333332221 1 0 1 23578889
Q ss_pred cCcchHHHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCcc
Q 022490 195 LRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQ 274 (296)
Q Consensus 195 LRaGl~m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~ 274 (296)
..+|+.++..+.+.+. .+++++...|.....+ .....++++++ |++|+|||||++||+|+.++++.|++.|+ ++
T Consensus 167 d~g~~~~A~~lA~~Lg-~~~~~i~k~r~~~~~~--~~~~~~~~~v~-g~~vliVDDii~tG~Tl~~a~~~l~~~ga--~~ 240 (308)
T TIGR01251 167 DAGGVERAKKVADALG-CPLAIIDKRRISATNE--VEVMNLVGDVE-GKDVVIVDDIIDTGGTIAKAAEILKSAGA--KR 240 (308)
T ss_pred CCchHHHHHHHHHHhC-CCEEEEEEEecCCCCE--EEEEecccccC-CCEEEEEccccCCHHHHHHHHHHHHhcCC--CE
Confidence 9999999999988764 6777776666522222 23456677887 99999999999999999999999999998 67
Q ss_pred EEEEEE--eeChHHHHHHHHh
Q 022490 275 IKVISA--VAAPPALQKLSEN 293 (296)
Q Consensus 275 I~v~~l--Ias~~Gle~l~~~ 293 (296)
|.+++. +.++++++++.+.
T Consensus 241 v~~~~th~v~~~~a~~~l~~~ 261 (308)
T TIGR01251 241 VIAAATHGVFSGPAIERIANA 261 (308)
T ss_pred EEEEEEeeecCcHHHHHHHhC
Confidence 888884 5788999999875
No 27
>PRK00934 ribose-phosphate pyrophosphokinase; Provisional
Probab=99.13 E-value=9.3e-10 Score=103.76 Aligned_cols=98 Identities=28% Similarity=0.353 Sum_probs=74.0
Q ss_pred EEEEEecCcchHHHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHc
Q 022490 189 VAVIPILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKEC 268 (296)
Q Consensus 189 iviV~ILRaGl~m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~ 268 (296)
.++|++.+||..++..+.+.+. .+..++.-.|...+ +... .....+++ ||+|||||||++||+|+.++++.|+++
T Consensus 156 ~vvv~pd~Ga~~~a~~lA~~l~-~~~~~i~k~r~~~~-~~~~--~~~~~~v~-Gk~VlIVDDIi~TG~Tl~~aa~~Lk~~ 230 (285)
T PRK00934 156 PLVLAPDKGALELAKEAAEILG-CEYDYLEKTRISPT-EVEI--APKNLDVK-GKDVLIVDDIISTGGTMATAIKILKEQ 230 (285)
T ss_pred CEEEEeCCchHHHHHHHHHHhC-CCEEEEEEEecCCC-eEEE--eccccccC-CCEEEEEcCccccHHHHHHHHHHHHHC
Confidence 4678889999999999988764 45555544443211 1111 12224686 999999999999999999999999999
Q ss_pred CCCCccEEEEEE--eeChHHHHHHHHh
Q 022490 269 GVENKQIKVISA--VAAPPALQKLSEN 293 (296)
Q Consensus 269 Ga~~k~I~v~~l--Ias~~Gle~l~~~ 293 (296)
|+ ++|.++++ +.++++.+++.+.
T Consensus 231 GA--~~V~~~~~H~i~~~~a~~~l~~~ 255 (285)
T PRK00934 231 GA--KKVYVACVHPVLVGDAILKLYNA 255 (285)
T ss_pred CC--CEEEEEEEeeccCcHHHHHHHhC
Confidence 98 67888885 7888999998764
No 28
>PRK02269 ribose-phosphate pyrophosphokinase; Provisional
Probab=99.11 E-value=8.6e-10 Score=105.72 Aligned_cols=144 Identities=17% Similarity=0.289 Sum_probs=98.3
Q ss_pred CCccEEEeCCchhHHHHHhhhccCCCChHHHHHHHHHHHHHHHHHHhccCCCCccceeecCCccceeEeeCCCCCEEEEE
Q 022490 114 GDRMLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIP 193 (296)
Q Consensus 114 ~~~~~v~v~~~P~i~~llTiLRD~~T~~~~Fr~~l~rL~rlL~eEAl~~~Lp~~~~~V~TP~G~~~~~~i~~~~~iviV~ 193 (296)
-++...+-+|++++++++.+.-+.....+.+..++.+ +. ++ .++.++|+
T Consensus 123 ~d~vit~D~H~~~~~~~f~~p~~~l~~~p~l~~~i~~----------~~--------------------~~-~~~~vvVs 171 (320)
T PRK02269 123 VDRLLTVDLHAAQIQGFFDIPVDHLMGAPLIADYFDR----------RG--------------------LV-GDDVVVVS 171 (320)
T ss_pred CCEEEEECCChHHHhccccCCchhhhhHHHHHHHHHH----------hC--------------------CC-CCCcEEEE
Confidence 3567777889999999987654444333333333221 00 11 13467888
Q ss_pred ecCcchHHHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCc
Q 022490 194 ILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENK 273 (296)
Q Consensus 194 ILRaGl~m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k 273 (296)
...||..++..+.+.+. .+...+.-.|.....+. .....+-++++ ||+|||||||++||+|+.++.+.|+++|+ +
T Consensus 172 Pd~G~~~~A~~lA~~lg-~~~~~~~k~r~~~~~~~-~~~~~~~gdv~-Gr~viIVDDIidTG~Tl~~aa~~Lk~~GA--~ 246 (320)
T PRK02269 172 PDHGGVTRARKLAQFLK-TPIAIIDKRRSVDKMNT-SEVMNIIGNVK-GKKCILIDDMIDTAGTICHAADALAEAGA--T 246 (320)
T ss_pred ECccHHHHHHHHHHHhC-CCEEEEEecccCCCCce-eEEEEeccccC-CCEEEEEeeecCcHHHHHHHHHHHHHCCC--C
Confidence 89999999999988764 44444443443222221 11233446787 99999999999999999999999999999 6
Q ss_pred cEEEEE--EeeChHHHHHHHHh
Q 022490 274 QIKVIS--AVAAPPALQKLSEN 293 (296)
Q Consensus 274 ~I~v~~--lIas~~Gle~l~~~ 293 (296)
+|.+++ .+.+.++.+++.+.
T Consensus 247 ~V~~~~tHglf~~~a~~~l~~~ 268 (320)
T PRK02269 247 EVYASCTHPVLSGPALDNIQKS 268 (320)
T ss_pred EEEEEEECcccCchHHHHHHhC
Confidence 787777 46788899998653
No 29
>PRK07199 phosphoribosylpyrophosphate synthetase; Provisional
Probab=99.04 E-value=3.5e-09 Score=100.78 Aligned_cols=139 Identities=17% Similarity=0.166 Sum_probs=92.9
Q ss_pred CccEEEeCCc---hhHHHHHhhhccCCCChHHHHHHHHHHHHHHHHHHhccCCCCccceeecCCccceeEeeCCCCCEEE
Q 022490 115 DRMLVFVPPH---PLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAV 191 (296)
Q Consensus 115 ~~~~v~v~~~---P~i~~llTiLRD~~T~~~~Fr~~l~rL~rlL~eEAl~~~Lp~~~~~V~TP~G~~~~~~i~~~~~ivi 191 (296)
++..++-+|. +++++++.+..++......|.+++.+ . + ++.++
T Consensus 119 d~vit~DlH~~~~~~~~~~f~ip~~nl~~~~~la~~l~~-----------~--------------------~---~~~vV 164 (301)
T PRK07199 119 DRLVTVDPHLHRYPSLSEVYPIPAVVLSAAPAIAAWIRA-----------H--------------------V---PRPLL 164 (301)
T ss_pred CeEEEEeccchhhHHhcCcccCCccccchHHHHHHHHHh-----------c--------------------C---CCcEE
Confidence 4444444443 78888888777766555555554322 1 0 12356
Q ss_pred EEecCcchHHHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCC
Q 022490 192 IPILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVE 271 (296)
Q Consensus 192 V~ILRaGl~m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~ 271 (296)
|+...+|..++..+.+.+. .++..+.-.|... .+.+. .....++++ ||+|+|||||++||+|+.++.+.|+++|+
T Consensus 165 VsPd~g~~~~a~~la~~l~-~~~~~~~K~R~~~-~~~~~-~~~~~~~v~-Gr~vIIVDDIidTG~Tl~~aa~~Lk~~GA- 239 (301)
T PRK07199 165 IGPDEESEQWVAAVAERAG-APHAVLRKTRHGD-RDVEI-SLPDAAPWA-GRTPVLVDDIVSTGRTLIEAARQLRAAGA- 239 (301)
T ss_pred EEeCCChHHHHHHHHHHhC-CCEEEEEEEecCC-CeEEE-EeccCcccC-CCEEEEEecccCcHHHHHHHHHHHHHCCC-
Confidence 7778888888888877653 4444444444322 11111 112234676 99999999999999999999999999999
Q ss_pred CccEEEEE--EeeChHHHHHHHHh
Q 022490 272 NKQIKVIS--AVAAPPALQKLSEN 293 (296)
Q Consensus 272 ~k~I~v~~--lIas~~Gle~l~~~ 293 (296)
++|.+++ -+.+..+.+++.+.
T Consensus 240 -~~V~~~~tHgvfs~~a~~~l~~~ 262 (301)
T PRK07199 240 -ASPDCVVVHALFAGDAYSALAAA 262 (301)
T ss_pred -cEEEEEEEeeeCChHHHHHHHhC
Confidence 6788777 56788889988653
No 30
>COG2065 PyrR Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=99.00 E-value=5e-09 Score=91.81 Aligned_cols=118 Identities=21% Similarity=0.339 Sum_probs=90.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHhccCCCCccceeecCCccceeEeeCCCCCEEEEEecCcchHHHHHHHccCCC-----cee
Q 022490 140 PCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPA-----IKT 214 (296)
Q Consensus 140 ~~~~Fr~~l~rL~rlL~eEAl~~~Lp~~~~~V~TP~G~~~~~~i~~~~~iviV~ILRaGl~m~~~l~k~lP~-----a~i 214 (296)
+..++++.+.|++..++|.- +.+ ++++++.|-..|..+++.+.+.+.. .++
T Consensus 8 d~~~i~RtitRia~eIiErn---------------------k~~---~~~vlvGIktrGv~lA~rl~~~i~~~Eg~~vp~ 63 (179)
T COG2065 8 DEAAIRRTITRIAHEIIERN---------------------KGL---DNLVLVGIKTRGVPLAERLAERIEELEGIEVPV 63 (179)
T ss_pred CHHHHHHHHHHHHHHHHHHh---------------------CCC---CceEEEeEecCCHHHHHHHHHHHHHHhCCCCCe
Confidence 36788899999888777532 112 3588999999999999888765432 456
Q ss_pred EE--EEEeecCCCC----cceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeC
Q 022490 215 YH--LGISRDEETL----QPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAA 283 (296)
Q Consensus 215 g~--I~i~rd~~t~----e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas 283 (296)
|. |.+|||..+. ++...-..+|.+|. ||+|+||||+|.||.|+.+|++.|.+.|- ++.|.+++++.-
T Consensus 64 g~lDIt~yRDDl~~~~~~~p~~~~t~~~~di~-~k~VILVDDVLytGRTIRAAldal~d~GR-Pa~I~LavLVDR 136 (179)
T COG2065 64 GELDITLYRDDLTQKGPLRPQAKTTILPFDIT-GKRVILVDDVLYTGRTIRAALDALVDYGR-PAKIQLAVLVDR 136 (179)
T ss_pred eeEEeEEeechhhhcCccCCcccCccCccccc-CCEEEEEeeecccCccHHHHHHHHHhcCC-cceEEEEEEEcC
Confidence 64 5569997432 33334456788897 99999999999999999999999999995 579999998763
No 31
>PRK00553 ribose-phosphate pyrophosphokinase; Provisional
Probab=98.94 E-value=1.7e-08 Score=97.41 Aligned_cols=140 Identities=19% Similarity=0.204 Sum_probs=97.1
Q ss_pred CccEEEeCCchhHHHHHhhhccCCCChHHHHHHHHHHHHHHHHHHhccCCCCccceeecCCccceeEeeCCCCCEEEEEe
Q 022490 115 DRMLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPI 194 (296)
Q Consensus 115 ~~~~v~v~~~P~i~~llTiLRD~~T~~~~Fr~~l~rL~rlL~eEAl~~~Lp~~~~~V~TP~G~~~~~~i~~~~~iviV~I 194 (296)
++...+-+|.+++++++.+.-+.......|..++.+ . +. . +++++|+.
T Consensus 128 d~vit~DlH~~~i~~~F~ipv~~l~a~~~~~~~~~~-----------~-~~-----------------~---~~~vvVsP 175 (332)
T PRK00553 128 TRVTLTDIHSDQTQGFFDIPVDILRTYHVFLSRVLE-----------L-LG-----------------K---KDLVVVSP 175 (332)
T ss_pred CEEEEEeCChHHHHhhcCCCcceeechHHHHHHHHH-----------h-cC-----------------C---CCeEEEEE
Confidence 567777889999999998777655554444333321 1 00 1 23577888
Q ss_pred cCcchHHHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCcc
Q 022490 195 LRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQ 274 (296)
Q Consensus 195 LRaGl~m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~ 274 (296)
-++|...++.+.+.+. .+...+.-.|..... . ....+.++++ |++|||||||++||+|+.++.+.|++.|+ ++
T Consensus 176 D~gg~~rA~~lA~~lg-~~~~vi~K~r~~~~~-~--~~~~~~gdv~-Gk~VIIVDDIi~TG~Tl~~aa~~Lk~~GA--~~ 248 (332)
T PRK00553 176 DYGGVKRARLIAESLE-LPLAIIDKRRPKHNV-A--ESINVLGEVK-NKNCLIVDDMIDTGGTVIAAAKLLKKQKA--KK 248 (332)
T ss_pred CCCcHHHHHHHHHHhC-CCEEEEEEecCCcce-E--eeEEeeccCC-CCEEEEEeccccchHHHHHHHHHHHHcCC--cE
Confidence 8999999888887663 444444333332111 1 1123446787 99999999999999999999999999998 56
Q ss_pred EEEEE--EeeChHHHHHHHHh
Q 022490 275 IKVIS--AVAAPPALQKLSEN 293 (296)
Q Consensus 275 I~v~~--lIas~~Gle~l~~~ 293 (296)
|.+++ -+.+.++.+++.+.
T Consensus 249 V~~~atHglf~~~a~~~l~~~ 269 (332)
T PRK00553 249 VCVMATHGLFNKNAIQLFDEA 269 (332)
T ss_pred EEEEEEeeecCchHHHHHHhc
Confidence 77666 46788899998653
No 32
>PRK09177 xanthine-guanine phosphoribosyltransferase; Validated
Probab=98.92 E-value=4.8e-09 Score=90.89 Aligned_cols=88 Identities=19% Similarity=0.227 Sum_probs=63.0
Q ss_pred EEEEEecCcchHHHHHHHccCCCceeEEEE--EeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHH
Q 022490 189 VAVIPILRAGLVLVEHASSILPAIKTYHLG--ISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVK 266 (296)
Q Consensus 189 iviV~ILRaGl~m~~~l~k~lP~a~ig~I~--i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk 266 (296)
.++|+++|||++|+..+.+.+.--.+.++. .|.++.+.+..... . + ..+ |++||||||+++||+|+.++.+.++
T Consensus 33 d~vvgv~~GG~~fa~~L~~~L~~~~v~~i~~ssY~~~~~~~~~~~~-~-~-~~~-gk~VLIVDDIiDTG~Tl~~v~~~l~ 108 (156)
T PRK09177 33 KGIIAVTRGGLVPAAILARELGIRLVDTVCISSYDHDNQGELKVLK-R-A-EGD-GEGFLVVDDLVDTGGTARAVREMYP 108 (156)
T ss_pred CEEEEEecCCeehHHHHHHHcCCCceeEEEEEEECCCcCCcEEEec-C-C-CcC-cCEEEEEeeeeCCHHHHHHHHHHHh
Confidence 468999999999999998876422233343 36544334332222 1 2 355 9999999999999999999999986
Q ss_pred HcCCCCccEEEEEEeeChHHH
Q 022490 267 ECGVENKQIKVISAVAAPPAL 287 (296)
Q Consensus 267 ~~Ga~~k~I~v~~lIas~~Gl 287 (296)
+ +++++++.++.+.
T Consensus 109 ~-------v~~a~l~~K~~~~ 122 (156)
T PRK09177 109 K-------AHFATVYAKPAGR 122 (156)
T ss_pred h-------CCEEEEEECcCCC
Confidence 3 5678888887654
No 33
>TIGR01090 apt adenine phosphoribosyltransferase. A phylogenetic analysis suggested omitting the bi-directional best hit homologs from the spirochetes from the seed for this model and making only tentative predictions of adenine phosphoribosyltransferase function for this lineage.
Probab=98.92 E-value=7e-09 Score=90.38 Aligned_cols=101 Identities=21% Similarity=0.213 Sum_probs=65.0
Q ss_pred EEEEecCcchHHHHHHHccCCCceeEEEEEeec-C----------CCCcceeeecCCCCCCCCCCEEEEEcCcccchHHH
Q 022490 190 AVIPILRAGLVLVEHASSILPAIKTYHLGISRD-E----------ETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTV 258 (296)
Q Consensus 190 viV~ILRaGl~m~~~l~k~lP~a~ig~I~i~rd-~----------~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl 258 (296)
+++++..+|+.++..+.+.+. .+...+.-.+. . ..++. .+..+-+...+ |++||||||+++||+|+
T Consensus 49 ~ivgi~~~G~~~A~~la~~L~-~~~~~i~k~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-gk~VLIVDDIitTG~Tl 125 (169)
T TIGR01090 49 YIVGPEARGFIFGAALAYKLG-VGFVPVRKPGKLPGETISASYDLEYGKD-QLEIHKDAIKP-GQRVLIVDDLLATGGTA 125 (169)
T ss_pred EEEeehhccHHHHHHHHHHHC-CCEEEEEeCCCCCCceeeeEEeeccCce-EEEEehhhcCC-cCEEEEEeccccchHHH
Confidence 577888999999888877653 33222211100 0 01111 11111122344 99999999999999999
Q ss_pred HHHHHHHHHcCCCCccEEEEEEe--eChHHHHHHHHhcC
Q 022490 259 VAALNLVKECGVENKQIKVISAV--AAPPALQKLSENFH 295 (296)
Q Consensus 259 ~aAi~~Lk~~Ga~~k~I~v~~lI--as~~Gle~l~~~fP 295 (296)
.++++.|++.|+. .+.+++++ .+.+|.+++.+.+|
T Consensus 126 ~~a~~~L~~~Ga~--~v~~~~l~~~~~~~g~~~i~~~~~ 162 (169)
T TIGR01090 126 EATDELIRKLGGE--VVEAAFLIELKDLNGRAKLEPNVP 162 (169)
T ss_pred HHHHHHHHHcCCE--EEEEEEEEEccccChHHHhccCCc
Confidence 9999999999984 45444444 45689999876543
No 34
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=98.92 E-value=5.8e-09 Score=93.65 Aligned_cols=81 Identities=21% Similarity=0.376 Sum_probs=60.3
Q ss_pred CEEEEEecCcchHHHHHHHccCCCceeEEEEE--eecCCCC--cceeeecCCCCC-CCCCCEEEEEcCcccchHHHHHHH
Q 022490 188 PVAVIPILRAGLVLVEHASSILPAIKTYHLGI--SRDEETL--QPSIYLNKLPEK-FPEGSRIFVVDPMLATGGTVVAAL 262 (296)
Q Consensus 188 ~iviV~ILRaGl~m~~~l~k~lP~a~ig~I~i--~rd~~t~--e~~~~~~~LP~d-I~~gk~VLLVDDmLATG~Tl~aAi 262 (296)
+-++|.|.|||+..++-+++.+.-.++..|.+ |.+..+. ++.+ ...++-+ +. ||+||||||+.|||.||..|.
T Consensus 30 PDvIiaiaRGG~~pariLsd~L~~~~l~~i~v~~y~~~~~~~~~~~v-~~~~~~d~l~-GkkVLIVDDI~DTG~Tl~~a~ 107 (192)
T COG2236 30 PDVIVAIARGGLIPARILSDFLGVKPLYSIKVEHYDETAERDGEAKV-KYPITIDPLS-GKKVLIVDDIVDTGETLELAL 107 (192)
T ss_pred CCEEEEEcCCceehHHHHHHHhCCCceEEEEEEEehhhcccCCccee-ecCccccccC-CCeEEEEecccCchHhHHHHH
Confidence 34789999999999999999886555555554 5554332 3322 2233444 76 999999999999999999999
Q ss_pred HHHHHcCC
Q 022490 263 NLVKECGV 270 (296)
Q Consensus 263 ~~Lk~~Ga 270 (296)
+.|++..+
T Consensus 108 ~~l~~~~p 115 (192)
T COG2236 108 EELKKLAP 115 (192)
T ss_pred HHHHhhCc
Confidence 99999443
No 35
>PLN02293 adenine phosphoribosyltransferase
Probab=98.91 E-value=6.4e-08 Score=86.37 Aligned_cols=53 Identities=32% Similarity=0.601 Sum_probs=44.2
Q ss_pred CCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCh--HHHHHHHH
Q 022490 238 KFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAP--PALQKLSE 292 (296)
Q Consensus 238 dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas~--~Gle~l~~ 292 (296)
.+.+|++|+||||+++||+|+.++++.|++.|+ +.+.+++++..+ .|.+++.+
T Consensus 121 ~i~~G~rVlIVDDvitTG~T~~~~~~~l~~~Ga--~~v~~~~~~~~~~~~g~~~l~~ 175 (187)
T PLN02293 121 AVEPGERALVIDDLIATGGTLCAAINLLERAGA--EVVECACVIELPELKGREKLNG 175 (187)
T ss_pred ccCCCCEEEEEeccccchHHHHHHHHHHHHCCC--EEEEEEEEEEcCCccHHHHhcC
Confidence 454599999999999999999999999999998 447777777644 49988854
No 36
>KOG3367 consensus Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=98.90 E-value=4.4e-09 Score=92.89 Aligned_cols=96 Identities=17% Similarity=0.248 Sum_probs=77.8
Q ss_pred CCEEEEEecCcchHHHHHHHccCCC--------ceeEEEEE--eecC-CCCcceeeecCCCCCCCCCCEEEEEcCcccch
Q 022490 187 EPVAVIPILRAGLVLVEHASSILPA--------IKTYHLGI--SRDE-ETLQPSIYLNKLPEKFPEGSRIFVVDPMLATG 255 (296)
Q Consensus 187 ~~iviV~ILRaGl~m~~~l~k~lP~--------a~ig~I~i--~rd~-~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG 255 (296)
+++++++||.||.-|..++.+.+.+ ..+.||.+ |++. .+++....-.+....+. ||+|+||||+++||
T Consensus 60 ~~i~~lcVlkG~ykF~adLve~l~n~~s~~~~pmtvDFIR~kSY~n~~stg~iqiig~d~l~~lt-gK~VliVeDIvdTG 138 (216)
T KOG3367|consen 60 KPIIFLCVLKGGYKFFADLVERLKNRNSDRPLPMTVDFIRAKSYCNDQSTGDIQIIGGDDLSTLT-GKNVLIVEDIVDTG 138 (216)
T ss_pred CceEEEEEecchhHHHHHHHHHHhhcccCCCcceeeeeeehhhhcCCcccCCceeecCCCHHHhc-CCcEEEEEeecccc
Confidence 5789999999999999888776543 34667766 6665 56666555555556787 99999999999999
Q ss_pred HHHHHHHHHHHHcCCCCccEEEEEEeeChH
Q 022490 256 GTVVAALNLVKECGVENKQIKVISAVAAPP 285 (296)
Q Consensus 256 ~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas~~ 285 (296)
+||.+.+..+++.++ +.+.+++++.++.
T Consensus 139 rTl~~Lls~~~~~k~--~~v~vasLL~Krt 166 (216)
T KOG3367|consen 139 RTLSTLLSHMKAYKP--SMVKVASLLVKRT 166 (216)
T ss_pred chHHHHHHHHHhcCc--cceeeeeeccccc
Confidence 999999999999998 7899999988764
No 37
>PTZ00145 phosphoribosylpyrophosphate synthetase; Provisional
Probab=98.81 E-value=7.5e-08 Score=95.93 Aligned_cols=140 Identities=17% Similarity=0.191 Sum_probs=86.8
Q ss_pred CccEEEeCCchhHHHHHh--hhccCCCChHHHHHHHHHHHHHHHHHHhccCCCCccceeecCCccceeEeeCCCCCEEEE
Q 022490 115 DRMLVFVPPHPLIKHWVS--ILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVI 192 (296)
Q Consensus 115 ~~~~v~v~~~P~i~~llT--iLRD~~T~~~~Fr~~l~rL~rlL~eEAl~~~Lp~~~~~V~TP~G~~~~~~i~~~~~iviV 192 (296)
++...+-+|.+++++++. +.-|.......|..++.. ....+..|..|.
T Consensus 238 d~VitvDlHs~~i~~fF~~~iPvdnl~a~~~~a~~i~~-------------~~l~~pVVVsPD----------------- 287 (439)
T PTZ00145 238 DRVVAIDLHSGQIQGFFGPRVPVDNLEAQLIGLDYFTK-------------KDLYKPVIVSPD----------------- 287 (439)
T ss_pred CeEEEEecChHHHHhhcCCCcccccccccHHHHHHHhh-------------cCCCccEEEccC-----------------
Confidence 566777789999999995 555544444444333321 112233444444
Q ss_pred EecCcchHHHHHHHccCC-----CceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHH
Q 022490 193 PILRAGLVLVEHASSILP-----AIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKE 267 (296)
Q Consensus 193 ~ILRaGl~m~~~l~k~lP-----~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~ 267 (296)
.||.-.++.+.+.+. ++.+..+.-.|+..+ +.+ ...+.++++ |++|||||||++||+|+.+|.+.|++
T Consensus 288 ---~Ga~~RAr~~A~~L~~~~~~~~~~avl~K~R~~~~-~v~--~~~lvgdV~-Gk~vIIVDDIIdTG~Tl~~aa~~Lk~ 360 (439)
T PTZ00145 288 ---AGGVYRARKFQDGLNHRGISDCGIAMLIKQRTKPN-EIE--KMDLVGNVY-DSDVIIVDDMIDTSGTLCEAAKQLKK 360 (439)
T ss_pred ---cchHHHHHHHHHHhccccccCCCEEEEEeecCCCC-ceE--EEeccCCCC-CCEEEEEcceeCcHHHHHHHHHHHHH
Confidence 333333333333221 233444433443321 111 244567897 99999999999999999999999999
Q ss_pred cCCCCccEEEEE--EeeChHHHHHHHHh
Q 022490 268 CGVENKQIKVIS--AVAAPPALQKLSEN 293 (296)
Q Consensus 268 ~Ga~~k~I~v~~--lIas~~Gle~l~~~ 293 (296)
+|+ ++|.+++ -+.+.++.++|.+.
T Consensus 361 ~GA--~~V~~~~THglfs~~A~~rl~~s 386 (439)
T PTZ00145 361 HGA--RRVFAFATHGLFSGPAIERIEAS 386 (439)
T ss_pred cCC--CEEEEEEEcccCChhHHHHHhcC
Confidence 999 6787777 36678889998653
No 38
>PRK02304 adenine phosphoribosyltransferase; Provisional
Probab=98.80 E-value=3.3e-08 Score=86.51 Aligned_cols=95 Identities=23% Similarity=0.327 Sum_probs=65.5
Q ss_pred EEEEecCcchHHHHHHHccCCCceeEEEEEeecCC-------------CCcceeeecCCCCCCCCCCEEEEEcCcccchH
Q 022490 190 AVIPILRAGLVLVEHASSILPAIKTYHLGISRDEE-------------TLQPSIYLNKLPEKFPEGSRIFVVDPMLATGG 256 (296)
Q Consensus 190 viV~ILRaGl~m~~~l~k~lP~a~ig~I~i~rd~~-------------t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~ 256 (296)
+++++..+|+.++..+.+.+. .+... +.+... ..+. .++..-...++ |++||||||+++||+
T Consensus 54 ~Ivgv~~~Gi~~a~~la~~l~-~p~~~--~rk~~~~~~~~~~~~~~~~~~~~-~l~l~~~~~~~-g~~VLIVDDivtTG~ 128 (175)
T PRK02304 54 KIVGIEARGFIFGAALAYKLG-IGFVP--VRKPGKLPRETISESYELEYGTD-TLEIHKDAIKP-GDRVLIVDDLLATGG 128 (175)
T ss_pred EEEEEccchHHHHHHHHHHhC-CCEEE--EEcCCCCCCceEeEEEecccCce-EEEEchhhcCC-CCEEEEEeCCccccH
Confidence 578889999999998887653 33221 111110 0111 11111112255 999999999999999
Q ss_pred HHHHHHHHHHHcCCCCccEEEEEEeeChH--HHHHHH
Q 022490 257 TVVAALNLVKECGVENKQIKVISAVAAPP--ALQKLS 291 (296)
Q Consensus 257 Tl~aAi~~Lk~~Ga~~k~I~v~~lIas~~--Gle~l~ 291 (296)
|+.++++.|+++|+ +.+.+++++.... |.+++.
T Consensus 129 Tl~~~~~~l~~~Ga--~~v~v~vl~~~~~~~g~~~l~ 163 (175)
T PRK02304 129 TLEAAIKLLERLGA--EVVGAAFVIELPDLGGREKLE 163 (175)
T ss_pred HHHHHHHHHHHcCC--EEEEEEEEEEcccccchhhcC
Confidence 99999999999998 5687888888765 777775
No 39
>PRK02277 orotate phosphoribosyltransferase-like protein; Provisional
Probab=98.76 E-value=5.2e-08 Score=87.47 Aligned_cols=96 Identities=17% Similarity=0.246 Sum_probs=62.8
Q ss_pred EEEEecCcchHHHHHHHccCCCceeEEEEEeec-CCC-CcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHH
Q 022490 190 AVIPILRAGLVLVEHASSILPAIKTYHLGISRD-EET-LQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKE 267 (296)
Q Consensus 190 viV~ILRaGl~m~~~l~k~lP~a~ig~I~i~rd-~~t-~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~ 267 (296)
+++++-++|++++..+...+. .+...+.-.+. ..+ ..+...+......++ |++|+||||+++||+|+.++++.|++
T Consensus 88 ~Ivgi~~gG~~~A~~lA~~L~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~-gk~VlIVDDVitTG~Tl~~ai~~l~~ 165 (200)
T PRK02277 88 VVVGIAKSGVPLATLVADELG-KDLAIYHPKKWDHGEGEKKTGSFSRNFASVE-GKRCVIVDDVITSGTTMKETIEYLKE 165 (200)
T ss_pred EEEeeccCCHHHHHHHHHHhC-CCcEEEecccccccccccccceeccccccCC-cCEEEEEeeccCchHHHHHHHHHHHH
Confidence 578899999999999887664 23222111110 011 111111111113466 99999999999999999999999999
Q ss_pred cCCCCccEEEEEEeeChHHHHHH
Q 022490 268 CGVENKQIKVISAVAAPPALQKL 290 (296)
Q Consensus 268 ~Ga~~k~I~v~~lIas~~Gle~l 290 (296)
.|+ +.+.+++++.. .|.+++
T Consensus 166 ~Ga--~~v~v~vlvdk-~g~~~~ 185 (200)
T PRK02277 166 HGG--KPVAVVVLIDK-SGIDEI 185 (200)
T ss_pred cCC--EEEEEEEEEEC-cchhhh
Confidence 998 44666666665 466654
No 40
>TIGR01367 pyrE_Therm orotate phosphoribosyltransferase, Thermus family. This model represents a distinct clade of orotate phosphoribosyltransferases. Members include the experimentally determined example from Thermus aquaticus and additional examples from Caulobacter crescentus, Helicobacter pylori, Mesorhizobium loti, and related species.
Probab=98.75 E-value=4.8e-08 Score=87.04 Aligned_cols=88 Identities=13% Similarity=0.248 Sum_probs=63.0
Q ss_pred EEEEecCcchHHHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcC
Q 022490 190 AVIPILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECG 269 (296)
Q Consensus 190 viV~ILRaGl~m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~G 269 (296)
+++++.++|++++..+.+.+. .+. +...+...... ...+..+.+|++||||||+++||+|+.++++.|+++|
T Consensus 61 ~Ivgi~~gGi~~A~~la~~L~-~~~--i~~~k~~~~~~-----~~~~~~l~~G~~VLIVDDIi~TG~Tl~~a~~~l~~~G 132 (187)
T TIGR01367 61 FIVGPAMGGVILGYEVARQLS-VRS--IFAEREGGGMK-----LRRGFAVKPGEKFVAVEDVVTTGGSLLEAIRAIEGQG 132 (187)
T ss_pred EEEEEccCcHHHHHHHHHHhC-CCe--EEEEEeCCcEE-----EeecccCCCCCEEEEEEeeecchHHHHHHHHHHHHcC
Confidence 578999999999999887653 332 22333221111 1111123349999999999999999999999999999
Q ss_pred CCCccEEEEEEeeChHHH
Q 022490 270 VENKQIKVISAVAAPPAL 287 (296)
Q Consensus 270 a~~k~I~v~~lIas~~Gl 287 (296)
+ +.+.+++++...+|.
T Consensus 133 a--~vv~~~vlid~~~~~ 148 (187)
T TIGR01367 133 G--QVVGLACIIDRSQGG 148 (187)
T ss_pred C--eEEEEEEEEECcCCC
Confidence 8 567788888877654
No 41
>PRK00455 pyrE orotate phosphoribosyltransferase; Validated
Probab=98.69 E-value=1.6e-07 Score=83.98 Aligned_cols=91 Identities=20% Similarity=0.354 Sum_probs=63.3
Q ss_pred EEEEecCcchHHHHHHHccCCCceeEEEEEeecCC-CCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHc
Q 022490 190 AVIPILRAGLVLVEHASSILPAIKTYHLGISRDEE-TLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKEC 268 (296)
Q Consensus 190 viV~ILRaGl~m~~~l~k~lP~a~ig~I~i~rd~~-t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~ 268 (296)
+++++.++|++++..+.+.+. .+...+ .+... .+..... . ..... |++||||||+++||+|+.++++.|++.
T Consensus 67 ~Ivgi~~gG~~~A~~la~~L~-~~~~~~--rk~~~~~g~~~~~--~-~~~~~-g~~VliVDDvi~tG~Tl~~~~~~l~~~ 139 (202)
T PRK00455 67 VVAGPATGGIPLAAAVARALD-LPAIFV--RKEAKDHGEGGQI--E-GRRLF-GKRVLVVEDVITTGGSVLEAVEAIRAA 139 (202)
T ss_pred EEEecccCcHHHHHHHHHHhC-CCEEEE--ecccCCCCCCceE--E-ccCCC-CCEEEEEecccCCcHHHHHHHHHHHHc
Confidence 578899999999999988763 333322 22111 1111010 1 12344 999999999999999999999999999
Q ss_pred CCCCccEEEEEEeeChHHHHH
Q 022490 269 GVENKQIKVISAVAAPPALQK 289 (296)
Q Consensus 269 Ga~~k~I~v~~lIas~~Gle~ 289 (296)
|+ +.+.+++++...+|.+.
T Consensus 140 Ga--~~v~~~vlv~~~~~~~~ 158 (202)
T PRK00455 140 GA--EVVGVAVIVDRQSAAQE 158 (202)
T ss_pred CC--EEEEEEEEEECcchHHH
Confidence 98 56788888887544443
No 42
>TIGR00336 pyrE orotate phosphoribosyltransferase. The conserved Lys (K) residue at position 101 of the seed alignment has been proposed as the active site for the enzyme.
Probab=98.67 E-value=2.3e-07 Score=81.32 Aligned_cols=98 Identities=17% Similarity=0.219 Sum_probs=65.1
Q ss_pred EEEEecCcchHHHHHHHccCC--CceeEEEEEeecCCC-CcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHH
Q 022490 190 AVIPILRAGLVLVEHASSILP--AIKTYHLGISRDEET-LQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVK 266 (296)
Q Consensus 190 viV~ILRaGl~m~~~l~k~lP--~a~ig~I~i~rd~~t-~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk 266 (296)
+++.+-++|++++..+...+. ...+..+-+.+.... +.. .+ +-+.+.+|++||||||+++||+|+.++++.|+
T Consensus 57 ~Ivg~~~gG~~~A~~la~~l~~~~~~~~~~~~rk~~k~~g~~-~~---~~g~~~~g~~VlIVDDvi~TG~Tl~~a~~~l~ 132 (173)
T TIGR00336 57 VIAGPALGGIPIATAVSVKLAKPGGDIPLCFNRKEAKDHGEG-GN---IEGELLEGDKVVVVEDVITTGTSILEAVEIIQ 132 (173)
T ss_pred EEEccccChHHHHHHHHHHhcCcCCCceEEEEcCCcccCCCC-Cc---eecCCCCCCEEEEEeccccChHHHHHHHHHHH
Confidence 577888999999888877653 122222222222111 111 00 11234349999999999999999999999999
Q ss_pred HcCCCCccEEEEEEeeChH--HHHHHHHh
Q 022490 267 ECGVENKQIKVISAVAAPP--ALQKLSEN 293 (296)
Q Consensus 267 ~~Ga~~k~I~v~~lIas~~--Gle~l~~~ 293 (296)
+.|+. -+-+++++...+ |.+++.+.
T Consensus 133 ~~Ga~--v~~~~vlvdr~~~~~~~~l~~~ 159 (173)
T TIGR00336 133 AAGGQ--VAGVIIAVDRQERSAGQEFEKE 159 (173)
T ss_pred HcCCe--EEEEEEEEecCchhHHHHHHHh
Confidence 99984 356677777644 78888653
No 43
>PRK07322 adenine phosphoribosyltransferase; Provisional
Probab=98.65 E-value=1.3e-07 Score=83.29 Aligned_cols=95 Identities=25% Similarity=0.290 Sum_probs=61.4
Q ss_pred EEEEecCcchHHHHHHHccCCCceeEEEEEeecC-C------------CCcceeee-cC-CCCCCCCCCEEEEEcCcccc
Q 022490 190 AVIPILRAGLVLVEHASSILPAIKTYHLGISRDE-E------------TLQPSIYL-NK-LPEKFPEGSRIFVVDPMLAT 254 (296)
Q Consensus 190 viV~ILRaGl~m~~~l~k~lP~a~ig~I~i~rd~-~------------t~e~~~~~-~~-LP~dI~~gk~VLLVDDmLAT 254 (296)
+++++.++|++++..+.+.+. .+...+.-.+.. . .......+ .. ....++ |++|+||||+++|
T Consensus 55 ~Iv~v~~gGiplA~~lA~~L~-~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gk~VLIVDDiitT 132 (178)
T PRK07322 55 VLVTPETKGIPLAHALSRRLG-KPYVVARKSRKPYMQDPIIQEVVSITTGKPQLLVLDGADAEKLK-GKRVAIVDDVVST 132 (178)
T ss_pred EEEEeccCCHHHHHHHHHHHC-CCEEEEEEeCCCCCCCceEEEEEEEEeccceEEEecCccccccC-CCEEEEEeccccc
Confidence 578888999999988877653 332222111110 0 00011111 11 122465 9999999999999
Q ss_pred hHHHHHHHHHHHHcCCCCccEEEEEEeeChHHHH
Q 022490 255 GGTVVAALNLVKECGVENKQIKVISAVAAPPALQ 288 (296)
Q Consensus 255 G~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas~~Gle 288 (296)
|+|+.++++.|++.|+ +.+.+++++.-.+.-+
T Consensus 133 G~Tl~aa~~~L~~~GA--~~V~~~~v~~~~~~~~ 164 (178)
T PRK07322 133 GGTLTALERLVERAGG--QVVAKAAIFAEGDASN 164 (178)
T ss_pred cHHHHHHHHHHHHcCC--EEEEEEEEEEcCCCCC
Confidence 9999999999999998 4577777776554433
No 44
>PF14572 Pribosyl_synth: Phosphoribosyl synthetase-associated domain; PDB: 2H07_B 2H06_B 3S5J_B 2HCR_A 3EFH_A 2H08_A 1DKR_B 1DKU_B 1IBS_B 2JI4_A ....
Probab=98.62 E-value=5.4e-08 Score=86.86 Aligned_cols=55 Identities=31% Similarity=0.482 Sum_probs=44.8
Q ss_pred CCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEE--EeeChHHHHHHHH
Q 022490 235 LPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVIS--AVAAPPALQKLSE 292 (296)
Q Consensus 235 LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~--lIas~~Gle~l~~ 292 (296)
+-++++ ||.+||||||++||+|+.+|.+.|+++|| ++|++++ -+.+.++.++|.+
T Consensus 77 vVGDV~-gk~~IIvDDiIdtg~Tl~~aA~~Lk~~GA--~~V~~~aTHgvfs~~A~~~l~~ 133 (184)
T PF14572_consen 77 VVGDVK-GKICIIVDDIIDTGGTLIKAAELLKERGA--KKVYACATHGVFSGDAPERLEE 133 (184)
T ss_dssp EES--T-TSEEEEEEEEESSTHHHHHHHHHHHHTTE--SEEEEEEEEE---TTHHHHHHH
T ss_pred EEEEcc-CCeEeeecccccchHHHHHHHHHHHHcCC--CEEEEEEeCcccCchHHHHHhh
Confidence 457998 99999999999999999999999999999 6888777 4667888998876
No 45
>PRK13812 orotate phosphoribosyltransferase; Provisional
Probab=98.57 E-value=5.1e-07 Score=79.80 Aligned_cols=94 Identities=17% Similarity=0.236 Sum_probs=63.3
Q ss_pred EEEEecCcchHHHHHHHccCCCceeEEEEEeecC-CCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHc
Q 022490 190 AVIPILRAGLVLVEHASSILPAIKTYHLGISRDE-ETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKEC 268 (296)
Q Consensus 190 viV~ILRaGl~m~~~l~k~lP~a~ig~I~i~rd~-~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~ 268 (296)
+++++.-+|++++..+...+ +.+..+ +.+.. ..++...+. +.+.+|++|+||||+++||+|+.++++.|++.
T Consensus 61 ~ivg~~~ggi~lA~~lA~~l-~~p~~~--~rk~~k~yg~~~~~~----g~~~~g~~VlIVDDvitTG~Tl~~~~~~l~~~ 133 (176)
T PRK13812 61 KLAGVALGAVPLVAVTSVET-GVPYVI--ARKQAKEYGTGNRIE----GRLDEGEEVVVLEDIATTGQSAVDAVEALREA 133 (176)
T ss_pred EEEEeecchHHHHHHHHHHH-CCCEEE--EeccCCcCCCCCeEE----ecCCCcCEEEEEEEeeCCCHHHHHHHHHHHHC
Confidence 57778889999998887755 333322 22221 112111111 34545999999999999999999999999999
Q ss_pred CCCCccEEEEEEeeChHH-HHHHHH
Q 022490 269 GVENKQIKVISAVAAPPA-LQKLSE 292 (296)
Q Consensus 269 Ga~~k~I~v~~lIas~~G-le~l~~ 292 (296)
|+. -+-+++++...+| .+++.+
T Consensus 134 Ga~--vv~~~vlvdr~~~~~~~l~~ 156 (176)
T PRK13812 134 GAT--VNRVLVVVDREEGARENLAD 156 (176)
T ss_pred CCe--EEEEEEEEECCcchHHHHHh
Confidence 984 3666777776644 455543
No 46
>PRK13811 orotate phosphoribosyltransferase; Provisional
Probab=98.57 E-value=5e-07 Score=79.26 Aligned_cols=92 Identities=15% Similarity=0.240 Sum_probs=62.0
Q ss_pred EEEEecCcchHHHHHHHccCCCceeEEEEEeecC-CCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHc
Q 022490 190 AVIPILRAGLVLVEHASSILPAIKTYHLGISRDE-ETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKEC 268 (296)
Q Consensus 190 viV~ILRaGl~m~~~l~k~lP~a~ig~I~i~rd~-~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~ 268 (296)
+++++-.+|++++..+...+ +.+. +-+.+.. ..+....+ .++++ |++|+||||+++||+|+.++++.|++.
T Consensus 59 ~Vvg~~~gGi~~A~~~a~~l-~~p~--~~~rK~~k~~g~~~~~----~g~~~-g~~VlIVDDvi~TG~T~~~~~~~l~~~ 130 (170)
T PRK13811 59 VVAGVAVGGVPLAVAVSLAA-GKPY--AIIRKEAKDHGKAGLI----IGDVK-GKRVLLVEDVTTSGGSALYGIEQLRAA 130 (170)
T ss_pred EEEecCcCcHHHHHHHHHHH-CCCE--EEEecCCCCCCCcceE----EcccC-CCEEEEEEecccccHHHHHHHHHHHHC
Confidence 35667788999988887765 3332 2222221 11211111 23566 999999999999999999999999999
Q ss_pred CCCCccEEEEEEeeChHH-HHHHH
Q 022490 269 GVENKQIKVISAVAAPPA-LQKLS 291 (296)
Q Consensus 269 Ga~~k~I~v~~lIas~~G-le~l~ 291 (296)
|+.+ +.+++++...+| .+++.
T Consensus 131 Ga~v--~~~~~~vdr~~g~~~~l~ 152 (170)
T PRK13811 131 GAVV--DDVVTVVDREQGAEELLA 152 (170)
T ss_pred CCeE--EEEEEEEECCccHHHHHH
Confidence 9854 556677776655 44554
No 47
>PRK06031 phosphoribosyltransferase; Provisional
Probab=98.55 E-value=6.4e-07 Score=82.66 Aligned_cols=101 Identities=22% Similarity=0.291 Sum_probs=61.9
Q ss_pred EEEEecCcchHHHHHHHccCCC---ceeEEEE--EeecCCC---------Ccceeeec-C-CCCCCCCCCEEEEEcCccc
Q 022490 190 AVIPILRAGLVLVEHASSILPA---IKTYHLG--ISRDEET---------LQPSIYLN-K-LPEKFPEGSRIFVVDPMLA 253 (296)
Q Consensus 190 viV~ILRaGl~m~~~l~k~lP~---a~ig~I~--i~rd~~t---------~e~~~~~~-~-LP~dI~~gk~VLLVDDmLA 253 (296)
++|++-.+|++++..+.+.+.. ..+.+.. .++++.+ .+....+. + ....++ |++|+||||+++
T Consensus 87 vIVgv~~~Gi~lA~~lA~~Lg~~~~vpl~~~rK~~~~~~l~~~~~sitt~~~~~~~~l~~~~~~~~~-GkrVLIVDDVit 165 (233)
T PRK06031 87 VVAGLPTLGLTLAAAVARKLGHTRYVPLGTSRKFWYRDELSVPLSSITTPDQGKRLYIDPRMLPLLE-GRRVALIDDVIS 165 (233)
T ss_pred EEEEeccCCHHHHHHHHHHHCCCCceEEEEccccccccccccceeeeeccCccceEEecccccccCC-CCEEEEEEeEcc
Confidence 5788889999998887766542 2222211 1222111 11111111 1 122355 999999999999
Q ss_pred chHHHHHHHHHHHHcCCCCccEEEEEEee-ChHHHHHHHHh
Q 022490 254 TGGTVVAALNLVKECGVENKQIKVISAVA-APPALQKLSEN 293 (296)
Q Consensus 254 TG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIa-s~~Gle~l~~~ 293 (296)
||+|+.+++++|++.|+.+ +-+++++. ...+.+++.+.
T Consensus 166 TG~Tl~aa~~lL~~~Ga~V--vgv~v~v~~g~~~~~~l~~~ 204 (233)
T PRK06031 166 SGASIVAGLRLLAACGIEP--AGIGAAMLQSERWRESLAAA 204 (233)
T ss_pred ccHHHHHHHHHHHHcCCeE--EEEEEEEEccccHHHHHHhc
Confidence 9999999999999999854 44444444 34455566553
No 48
>PRK08558 adenine phosphoribosyltransferase; Provisional
Probab=98.53 E-value=9.8e-07 Score=81.53 Aligned_cols=99 Identities=19% Similarity=0.296 Sum_probs=65.8
Q ss_pred EEEEEecCcchHHHHHHHccCCCceeEEEEEeecC--------------CCCcceeeecCCCC-CCCCCCEEEEEcCccc
Q 022490 189 VAVIPILRAGLVLVEHASSILPAIKTYHLGISRDE--------------ETLQPSIYLNKLPE-KFPEGSRIFVVDPMLA 253 (296)
Q Consensus 189 iviV~ILRaGl~m~~~l~k~lP~a~ig~I~i~rd~--------------~t~e~~~~~~~LP~-dI~~gk~VLLVDDmLA 253 (296)
-+++.+..+|++++..+...+. .+...+ .++. .++... ...+|. .+.+|++||||||+++
T Consensus 113 D~Vvtv~~~GI~lA~~lA~~L~-~p~vi~--Rk~~~~~~~~~v~~y~s~s~~~~~--~~~l~~~~l~~G~rVLIVDDvi~ 187 (238)
T PRK08558 113 DVVLTAATDGIPLAVAIASYFG-ADLVYA--KKSKETGVEKFYEEYQRLASGIEV--TLYLPASALKKGDRVLIVDDIIR 187 (238)
T ss_pred CEEEEECcccHHHHHHHHHHHC-cCEEEE--EecCCCCCcceEEEeeccCCCcee--EEEecHHHcCCcCEEEEEecccc
Confidence 4678888999999988877653 332221 1111 011111 122332 3445999999999999
Q ss_pred chHHHHHHHHHHHHcCCCCccEEEEEEeeChH-HHHHHHHhc
Q 022490 254 TGGTVVAALNLVKECGVENKQIKVISAVAAPP-ALQKLSENF 294 (296)
Q Consensus 254 TG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas~~-Gle~l~~~f 294 (296)
||+|+.++++++++.|+.. +-+++++...+ |.+++.+++
T Consensus 188 TG~Tl~~~~~ll~~~ga~v--vgv~vlv~~~~~~~~~l~~~~ 227 (238)
T PRK08558 188 SGETQRALLDLARQAGADV--VGVFFLIAVGEVGIDRAREET 227 (238)
T ss_pred cCHHHHHHHHHHHHcCCEE--EEEEEEEecCchHHHHHhHhc
Confidence 9999999999999999843 55666666544 488887643
No 49
>COG0503 Apt Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism]
Probab=98.46 E-value=8.1e-07 Score=78.71 Aligned_cols=56 Identities=29% Similarity=0.526 Sum_probs=44.1
Q ss_pred CCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeChHHHHHHHHh
Q 022490 238 KFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSEN 293 (296)
Q Consensus 238 dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas~~Gle~l~~~ 293 (296)
.+++|++|+||||+++||+|+.+.++++.+.|+....+.++.-.....|.+++...
T Consensus 112 ~l~~G~rVlIVDDllaTGgT~~a~~~Ll~~~ga~vvg~~~~ie~~~~~gr~~l~~~ 167 (179)
T COG0503 112 ALKPGDRVLIVDDLLATGGTALALIELLEQAGAEVVGAAFVIELGELDGRKKLEDD 167 (179)
T ss_pred hCCCCCEEEEEecchhcChHHHHHHHHHHHCCCEEEEEEEEEEcCccccchhhccC
Confidence 34469999999999999999999999999999966555555555566666666553
No 50
>PLN02297 ribose-phosphate pyrophosphokinase
Probab=98.44 E-value=1.5e-06 Score=83.90 Aligned_cols=55 Identities=15% Similarity=0.373 Sum_probs=48.3
Q ss_pred CCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEE--EeeChHHHHHHHH
Q 022490 235 LPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVIS--AVAAPPALQKLSE 292 (296)
Q Consensus 235 LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~--lIas~~Gle~l~~ 292 (296)
+.++++ ||+|||||||++||+|+..+.+.|+++|+ ++|.+++ -+.+.++.+++.+
T Consensus 224 ~~~dv~-gr~vlIVDDIidTG~Tl~~aa~~L~~~Ga--~~V~~~~THglfs~~a~~~l~~ 280 (326)
T PLN02297 224 KEGNPA-GRHVVIVDDLVQSGGTLIECQKVLAAHGA--AKVSAYVTHGVFPNESWERFTH 280 (326)
T ss_pred cccccC-CCeEEEEecccCcHHHHHHHHHHHHHCCC--cEEEEEEECcccChhHHHHHHh
Confidence 456787 99999999999999999999999999998 6787777 4778889999875
No 51
>PRK13809 orotate phosphoribosyltransferase; Provisional
Probab=98.39 E-value=2.8e-06 Score=77.05 Aligned_cols=94 Identities=18% Similarity=0.222 Sum_probs=58.9
Q ss_pred EEEecCcchHHHHHHHccCCCceeEEEEEeecCCC--CcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHc
Q 022490 191 VIPILRAGLVLVEHASSILPAIKTYHLGISRDEET--LQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKEC 268 (296)
Q Consensus 191 iV~ILRaGl~m~~~l~k~lP~a~ig~I~i~rd~~t--~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~ 268 (296)
++.+=.+|++++..+...+ +.+.. +.|-+.. ++... ..+.+.+.+|++|+||||+++||+|+.++++.|++.
T Consensus 71 IvG~~~~Gi~~A~~vA~~l-~~p~~---~~RK~~K~~G~~~~--~~~~g~~~~g~~VlIVDDViTTG~Ti~~a~~~L~~~ 144 (206)
T PRK13809 71 LCGVPYTALTLATSISLKY-NIPMV---LRRKELKNVDPSDA--IKVEGLFTPGQTCLVINDMVSSGKSIIETAVALEEE 144 (206)
T ss_pred EEEecCccHHHHHHHHHHh-CCCEE---EEeCCCCCCCCcCE--EEEccccCCCCEEEEEEeccccCHHHHHHHHHHHHC
Confidence 5555567998888776644 33322 2222111 11111 111223435999999999999999999999999999
Q ss_pred CCCCccEEEEEEeeCh-HHHHHHHH
Q 022490 269 GVENKQIKVISAVAAP-PALQKLSE 292 (296)
Q Consensus 269 Ga~~k~I~v~~lIas~-~Gle~l~~ 292 (296)
|+. -+.+++++... .|.+++.+
T Consensus 145 G~~--vv~v~vlvdr~~~~~~~l~~ 167 (206)
T PRK13809 145 GLV--VREALVFLDRQKGACQPLGP 167 (206)
T ss_pred CCE--EEEEEEEEECcccHHHHHHh
Confidence 984 35556666643 45666643
No 52
>PLN02440 amidophosphoribosyltransferase
Probab=98.36 E-value=1.5e-06 Score=87.72 Aligned_cols=89 Identities=21% Similarity=0.307 Sum_probs=59.9
Q ss_pred EEEEecCcchHHHHHHHccCCC-ceeEEEEE-eecC---------CCCcceeeecCCCCCCCCCCEEEEEcCcccchHHH
Q 022490 190 AVIPILRAGLVLVEHASSILPA-IKTYHLGI-SRDE---------ETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTV 258 (296)
Q Consensus 190 viV~ILRaGl~m~~~l~k~lP~-a~ig~I~i-~rd~---------~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl 258 (296)
++|||..+|+.++.++.+.+.- ...+.+.. |... .+.............++ ||+||||||+++||.|+
T Consensus 278 ~vvpVP~s~~~~A~~la~~lgiP~~~~lvr~ry~~rt~i~~~q~~r~~~~~~k~~~~~~~v~-gk~VlLVDDiittGtTl 356 (479)
T PLN02440 278 VVIPVPDSGRVAALGYAAKLGVPFQQGLIRSHYVGRTFIEPSQKIRDFSVKLKLNPVRSVLE-GKRVVVVDDSIVRGTTS 356 (479)
T ss_pred EEEEeCCcHHHHHHHHHHHhCCCchhheEEEeeccccccCcchhhhhhhheeeeeccccccc-CceEEEEeceeCcHHHH
Confidence 5789999999999988876531 22333321 1110 11111121122224576 99999999999999999
Q ss_pred HHHHHHHHHcCCCCccEEEEEEe
Q 022490 259 VAALNLVKECGVENKQIKVISAV 281 (296)
Q Consensus 259 ~aAi~~Lk~~Ga~~k~I~v~~lI 281 (296)
.++++.|+++|+ ++|.++++.
T Consensus 357 ~~i~~~L~~aGa--~~V~v~v~~ 377 (479)
T PLN02440 357 SKIVRMLREAGA--KEVHMRIAS 377 (479)
T ss_pred HHHHHHHHhcCC--CEEEEEEEC
Confidence 999999999998 578777664
No 53
>TIGR00201 comF comF family protein. This protein is found in species that do (Bacillus subtilis, Haemophilus influenzae) or do not (E. coli, Borrelia burgdorferi) have described systems for natural transformation with exogenous DNA. It is involved in competence for transformation in Bacillus subtilis.
Probab=98.29 E-value=1e-06 Score=78.02 Aligned_cols=40 Identities=30% Similarity=0.500 Sum_probs=36.0
Q ss_pred CCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEE
Q 022490 238 KFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISA 280 (296)
Q Consensus 238 dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~l 280 (296)
++. |++|||||||++||.|+.++.+.|++.|+ ++|.++++
T Consensus 149 ~~~-~~~vllvDDV~TTGaTl~~~~~~L~~~Ga--~~V~~~~l 188 (190)
T TIGR00201 149 SFQ-GRNIVLVDDVVTTGATLHEIARLLLELGA--ASVQVWTL 188 (190)
T ss_pred CCC-CCEEEEEeeeeccHHHHHHHHHHHHHcCC--CEEEEEEE
Confidence 476 89999999999999999999999999998 57877775
No 54
>TIGR01744 XPRTase xanthine phosphoribosyltransferase. This model represent a xanthine-specific phosphoribosyltransferase of Bacillus subtilis and closely related proteins from other species, mostly from other Gram-positive bacteria. The adjacent gene is a xanthine transporter; B. subtilis can import xanthine for the purine salvage pathway or for catabolism to obtain nitrogen.
Probab=98.27 E-value=4e-06 Score=75.09 Aligned_cols=52 Identities=19% Similarity=0.383 Sum_probs=41.5
Q ss_pred CCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeC--hHHHHHHHH
Q 022490 239 FPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAA--PPALQKLSE 292 (296)
Q Consensus 239 I~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas--~~Gle~l~~ 292 (296)
+.+|++|+||||+++||+|+.++++++++.|+.+ +-+++++.. ..|.+++.+
T Consensus 114 l~~G~rVLIVDDvvtTGgT~~a~~~ll~~aGa~V--vgv~~lvd~~~~~g~~~l~~ 167 (191)
T TIGR01744 114 LSDQDRVLIIDDFLANGQAAHGLVDIAKQAGAKI--AGIGIVIEKSFQNGRQELVE 167 (191)
T ss_pred CCCcCEEEEEEehhccChHHHHHHHHHHHCCCEE--EEEEEEEEecCccHHHHHHh
Confidence 4459999999999999999999999999999854 445555554 357777754
No 55
>PRK12560 adenine phosphoribosyltransferase; Provisional
Probab=98.27 E-value=6.5e-06 Score=73.38 Aligned_cols=50 Identities=30% Similarity=0.491 Sum_probs=41.0
Q ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCh--HHHHHHHH
Q 022490 241 EGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAP--PALQKLSE 292 (296)
Q Consensus 241 ~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas~--~Gle~l~~ 292 (296)
+|++||||||+++||+|+.++++.|++.|+. -+-+++++... .|.+++.+
T Consensus 113 ~G~rVlIVDDvitTG~T~~~ai~ll~~aGa~--vv~v~~vvd~~~~~g~~~l~~ 164 (187)
T PRK12560 113 KGDRVAIIDDTLSTGGTVIALIKAIENSGGI--VSDVICVIEKTQNNGRKKLFT 164 (187)
T ss_pred CcCEEEEEEeccccCHHHHHHHHHHHHCCCE--EEEEEEEEEecccchHHHHhh
Confidence 4999999999999999999999999999983 35566666654 46777744
No 56
>PRK11595 DNA utilization protein GntX; Provisional
Probab=98.23 E-value=2e-06 Score=78.41 Aligned_cols=44 Identities=23% Similarity=0.347 Sum_probs=38.4
Q ss_pred CCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEee
Q 022490 236 PEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVA 282 (296)
Q Consensus 236 P~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIa 282 (296)
..+++ |++|||||||++||.|+.++.+.|++.|+ ++|.++++..
T Consensus 182 ~~~~~-~~~vllvDDv~tTG~Tl~~~~~~L~~~g~--~~V~~~~la~ 225 (227)
T PRK11595 182 ELPVQ-GQHMAIVDDVVTTGSTVAEIAQLLLRNGA--ASVQVWCLCR 225 (227)
T ss_pred CCCCC-CCEEEEEeeeecchHHHHHHHHHHHHcCC--cEEEEEEEEe
Confidence 34576 99999999999999999999999999998 6788877643
No 57
>PRK13810 orotate phosphoribosyltransferase; Provisional
Probab=98.22 E-value=1e-05 Score=72.29 Aligned_cols=93 Identities=23% Similarity=0.275 Sum_probs=58.6
Q ss_pred EEEecCcchHHHHHHHccCCCceeEEEEEeecC-CCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcC
Q 022490 191 VIPILRAGLVLVEHASSILPAIKTYHLGISRDE-ETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECG 269 (296)
Q Consensus 191 iV~ILRaGl~m~~~l~k~lP~a~ig~I~i~rd~-~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~G 269 (296)
++.+--+|++++..+...+ +.+ .+-+.+.. .-++...+ -+.+.+|++|+||||+++||+|+.++++.|++.|
T Consensus 77 I~g~~~~GiplA~~vA~~l-~~p--~v~vRK~~k~~g~~~~~----~g~~~~g~rVlIVDDVitTGgS~~~~i~~l~~~G 149 (187)
T PRK13810 77 VAGVELGGVPLATAVSLET-GLP--LLIVRKSVKDYGTGSRF----VGDLKPEDRIVMLEDVTTSGGSVREAIEVVREAG 149 (187)
T ss_pred EEEEccchHHHHHHHHHHh-CCC--EEEEecCCCccCCCceE----EccCCCcCEEEEEEeccCCChHHHHHHHHHHHCC
Confidence 4555567888777666543 222 23333321 11211111 1234459999999999999999999999999999
Q ss_pred CCCccEEEEEEeeChH-HHHHHHH
Q 022490 270 VENKQIKVISAVAAPP-ALQKLSE 292 (296)
Q Consensus 270 a~~k~I~v~~lIas~~-Gle~l~~ 292 (296)
+.+ +-+++++...+ |.+++.+
T Consensus 150 a~V--~~v~vlvdr~~g~~~~l~~ 171 (187)
T PRK13810 150 AYI--KYVITVVDREEGAEENLKE 171 (187)
T ss_pred CEE--EEEEEEEECCcChHHHHHH
Confidence 844 45566666544 4566643
No 58
>KOG1448 consensus Ribose-phosphate pyrophosphokinase [Nucleotide transport and metabolism; Amino acid transport and metabolism]
Probab=98.22 E-value=2.7e-06 Score=80.80 Aligned_cols=140 Identities=23% Similarity=0.279 Sum_probs=93.8
Q ss_pred CccEEEeCCchhHHHHHhhhccCCCChHHHHHHHHHHHHHHHHHHhccCCCCccceeecCC-cc-ceeEeeCCCCCEEEE
Q 022490 115 DRMLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPM-GV-ASVEFIDPREPVAVI 192 (296)
Q Consensus 115 ~~~~v~v~~~P~i~~llTiLRD~~T~~~~Fr~~l~rL~rlL~eEAl~~~Lp~~~~~V~TP~-G~-~~~~~i~~~~~iviV 192 (296)
+.....=.+.+|.++++.+..|.....+....+++. + .-.+++..|.+|. |. .+...+.
T Consensus 122 dhvItmDlHa~Q~qgfF~ipVdnly~~p~~l~~ir~----------~-~~~~~~~vivSPdaGgaKR~~s~a-------- 182 (316)
T KOG1448|consen 122 DHVITMDLHASQIQGFFDIPVDNLYAEPAVLNYIRE----------N-IPDSENAVIVSPDAGGAKRVTSLA-------- 182 (316)
T ss_pred ceEEEecccchhhCceeeccchhhccchHHHHHHHh----------h-CCCccceEEECCCcchhhhhHHHH--------
Confidence 344555668899999999999987777766666655 2 2457778888887 32 2222221
Q ss_pred EecCcchHHHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCC
Q 022490 193 PILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVEN 272 (296)
Q Consensus 193 ~ILRaGl~m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~ 272 (296)
-.|.--+.+..+-++-- ++ .. ..+-|-+|++ ||.++|||||++|+||+..+.+.|.++|+
T Consensus 183 d~l~~~fali~ker~k~------------~~--v~---~~m~LVGDv~-gkvailVDDm~dt~GTl~~aa~~L~~~GA-- 242 (316)
T KOG1448|consen 183 DRLNLDFALIHKERRKA------------NE--VD---IRMVLVGDVK-GKVAILVDDMADTCGTLIKAADKLLEHGA-- 242 (316)
T ss_pred Hhhcchhhhhhhhhhcc------------cc--cc---eEEEEEeccC-CcEEEEecccccccchHHHHHHHHHhcCC--
Confidence 11222222222222210 01 00 0133447997 99999999999999999999999999999
Q ss_pred ccEEEEE--EeeChHHHHHHHHh
Q 022490 273 KQIKVIS--AVAAPPALQKLSEN 293 (296)
Q Consensus 273 k~I~v~~--lIas~~Gle~l~~~ 293 (296)
++|+.++ .+.+...++++.+.
T Consensus 243 ~kV~a~~THgVfs~~a~er~~~s 265 (316)
T KOG1448|consen 243 KKVYAIVTHGVFSGPAIERLNES 265 (316)
T ss_pred ceEEEEEcceeccccHHHHhhhc
Confidence 6787666 68899999998764
No 59
>PRK05793 amidophosphoribosyltransferase; Provisional
Probab=98.21 E-value=5.8e-06 Score=83.29 Aligned_cols=85 Identities=19% Similarity=0.276 Sum_probs=55.0
Q ss_pred EEEEecCcchHHHHHHHccCCCceeEEEEEeecC-------------CCCcceeeecCCCCCCCCCCEEEEEcCcccchH
Q 022490 190 AVIPILRAGLVLVEHASSILPAIKTYHLGISRDE-------------ETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGG 256 (296)
Q Consensus 190 viV~ILRaGl~m~~~l~k~lP~a~ig~I~i~rd~-------------~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~ 256 (296)
+++++=.+|...+.++.+.+. .+... .+.++. +..............++ ||+||||||+++||+
T Consensus 291 ~Vv~vPdsg~~~A~~~A~~lg-ip~~~-~l~r~~~~~rtfi~~~q~~R~~~~~~k~~~~~~~v~-gk~VlLVDD~ItTGt 367 (469)
T PRK05793 291 IVIGVPDSGIPAAIGYAEASG-IPYGI-GFIKNKYVGRTFIAPSQELRERAVRVKLNPLKVNVE-GKRVVLIDDSIVRGT 367 (469)
T ss_pred EEEEcCccHHHHHHHHHHHhC-CCEee-eEEEeeeccccccChhHhhhhhhheEecccCccccC-CCEEEEEccccCchH
Confidence 355666677777777766542 22221 111111 11112222234455677 999999999999999
Q ss_pred HHHHHHHHHHHcCCCCccEEEEE
Q 022490 257 TVVAALNLVKECGVENKQIKVIS 279 (296)
Q Consensus 257 Tl~aAi~~Lk~~Ga~~k~I~v~~ 279 (296)
|+.++++.|++.|+ ++|.+++
T Consensus 368 Tl~~~~~~Lr~aGA--k~V~~~~ 388 (469)
T PRK05793 368 TSKRLVELLRKAGA--KEVHFRV 388 (469)
T ss_pred HHHHHHHHHHHcCC--CEEEEEE
Confidence 99999999999999 5676655
No 60
>PRK09123 amidophosphoribosyltransferase; Provisional
Probab=98.19 E-value=8e-06 Score=82.55 Aligned_cols=87 Identities=15% Similarity=0.207 Sum_probs=59.1
Q ss_pred EEEEecCcchHHHHHHHccCCC-ceeEEEEE-eecC---------CCCcceeeecCCCCCCCCCCEEEEEcCcccchHHH
Q 022490 190 AVIPILRAGLVLVEHASSILPA-IKTYHLGI-SRDE---------ETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTV 258 (296)
Q Consensus 190 viV~ILRaGl~m~~~l~k~lP~-a~ig~I~i-~rd~---------~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl 258 (296)
++|+|..+|++++.++.+.+.- ...+.+.. |.+. .+.............++ ||+||||||+++||.|+
T Consensus 298 ~Vv~VP~sg~~~A~~la~~lgip~~~~lir~~y~grt~i~~~q~~r~~~v~~k~~~~~~~~~-gk~vvlvDD~i~tG~Tl 376 (479)
T PRK09123 298 VVVPVPDSGVPAAIGYAQESGIPFELGIIRNHYVGRTFIQPTQQIRNLGVKLKHNANRAVIE-GKRVVLVDDSIVRGTTS 376 (479)
T ss_pred EEEEcCccHHHHHHHHHHhcCCCeeheEEEEeecCccccccccccccccEEEEecccccccC-CCEEEEEeceeCchHHH
Confidence 6889999999999999886431 22333322 2211 11112222222333476 99999999999999999
Q ss_pred HHHHHHHHHcCCCCccEEEEE
Q 022490 259 VAALNLVKECGVENKQIKVIS 279 (296)
Q Consensus 259 ~aAi~~Lk~~Ga~~k~I~v~~ 279 (296)
.++++.|++.|+ ++|.+++
T Consensus 377 ~~~~~~l~~~Ga--~~v~~~~ 395 (479)
T PRK09123 377 RKIVQMLRDAGA--KEVHLRI 395 (479)
T ss_pred HHHHHHHHHcCC--CEEEEEE
Confidence 999999999998 5676655
No 61
>PRK09219 xanthine phosphoribosyltransferase; Validated
Probab=98.17 E-value=2.8e-06 Score=76.04 Aligned_cols=52 Identities=19% Similarity=0.462 Sum_probs=41.4
Q ss_pred CCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCh--HHHHHHHH
Q 022490 239 FPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAP--PALQKLSE 292 (296)
Q Consensus 239 I~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas~--~Gle~l~~ 292 (296)
+.+|++|+||||+++||+|+.++++++++.|+.+ +-+++++... .|.+++.+
T Consensus 114 i~~G~rVlIVDDviaTGgT~~a~~~lv~~aGa~v--vgv~~lvd~~~~~g~~~l~~ 167 (189)
T PRK09219 114 LSEGDRVLIIDDFLANGQAALGLIDIIEQAGAKV--AGIGIVIEKSFQDGRKLLEE 167 (189)
T ss_pred CCCCCEEEEEeehhhcChHHHHHHHHHHHCCCEE--EEEEEEEEccCccHHHHHHh
Confidence 4469999999999999999999999999999854 4445555443 57777754
No 62
>COG1926 Predicted phosphoribosyltransferases [General function prediction only]
Probab=98.16 E-value=4.2e-06 Score=76.18 Aligned_cols=55 Identities=29% Similarity=0.400 Sum_probs=50.2
Q ss_pred CCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeChHHHHHHHHh
Q 022490 236 PEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSEN 293 (296)
Q Consensus 236 P~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas~~Gle~l~~~ 293 (296)
+.+++ |++||||||=+|||.||.+|++.++++|+ ++|++++-++.++..+.|..+
T Consensus 119 ~~~~~-g~~VIlVDDGiATGatm~aAi~~~r~~~~--~~IviAVPV~p~~a~~~l~s~ 173 (220)
T COG1926 119 VPSLK-GRTVILVDDGIATGATMKAAVRALRAKGP--KEIVIAVPVAPEDAAAELESE 173 (220)
T ss_pred CCCCC-CCEEEEEeCCcchhHHHHHHHHHHHhcCC--ceEEEEcccCCHHHHHHHHhh
Confidence 34687 99999999999999999999999999998 789999999999999888764
No 63
>COG1040 ComFC Predicted amidophosphoribosyltransferases [General function prediction only]
Probab=98.10 E-value=5.4e-06 Score=76.01 Aligned_cols=49 Identities=31% Similarity=0.542 Sum_probs=40.2
Q ss_pred CCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCh
Q 022490 234 KLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAP 284 (296)
Q Consensus 234 ~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas~ 284 (296)
.+.+.++..++|+|||||++||.|+..+.++|++.|+ ++|.++++..++
T Consensus 176 ~~~~~~~~~~~vlLvDDV~TTGaTl~~~~~~L~~~Ga--~~v~~~~lar~~ 224 (225)
T COG1040 176 RLKKGIEEPKNVLLVDDVYTTGATLKEAAKLLREAGA--KRVFVLTLARAP 224 (225)
T ss_pred ecCCCCCCCCeEEEEecccccHHHHHHHHHHHHHcCC--ceEEEEEEEecC
Confidence 3444554238999999999999999999999999998 789888876543
No 64
>PRK08525 amidophosphoribosyltransferase; Provisional
Probab=98.08 E-value=1.6e-05 Score=79.64 Aligned_cols=42 Identities=26% Similarity=0.486 Sum_probs=36.4
Q ss_pred CCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEE
Q 022490 235 LPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVIS 279 (296)
Q Consensus 235 LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~ 279 (296)
.+..++ ||+||||||+++||+|+.++++.|++.|+ ++|.+++
T Consensus 334 ~~~~v~-gK~VlLVDDvitTG~Tl~~a~~~Lr~aGA--~~V~v~~ 375 (445)
T PRK08525 334 MSKVLE-GKRIVVIDDSIVRGTTSKKIVSLLRAAGA--KEIHLRI 375 (445)
T ss_pred cccccC-CCeEEEEecccCcHHHHHHHHHHHHhcCC--CEEEEEE
Confidence 344576 99999999999999999999999999998 5676665
No 65
>PRK09246 amidophosphoribosyltransferase; Provisional
Probab=98.07 E-value=1.5e-05 Score=80.94 Aligned_cols=88 Identities=23% Similarity=0.277 Sum_probs=56.6
Q ss_pred EEEEecCcchHHHHHHHccCCC-ceeEEEEEeecCCC----------CcceeeecCCCCCCCCCCEEEEEcCcccchHHH
Q 022490 190 AVIPILRAGLVLVEHASSILPA-IKTYHLGISRDEET----------LQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTV 258 (296)
Q Consensus 190 viV~ILRaGl~m~~~l~k~lP~-a~ig~I~i~rd~~t----------~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl 258 (296)
++|||--.+..++..+.+.+.- ...+.+.......+ .+....+......++ ||+|+||||+++||.|+
T Consensus 296 ~VvpVP~s~~~~A~~la~~lgip~~~~l~k~~~~~rt~i~~~q~~R~~~vr~~f~~~~~~v~-gK~VlLVDDvitTGaTl 374 (501)
T PRK09246 296 VVIPIPDTSRDAALEIARILGVPYREGFVKNRYVGRTFIMPGQAQRKKSVRQKLNAIRAEFK-GKNVLLVDDSIVRGTTS 374 (501)
T ss_pred EEEEeCccHHHHHHHHHHHHCCCccceEEEEecccccccCcCHHHHHHHHHhhcCCcccccc-CCeEEEEeccccccHHH
Confidence 4677777788888887765421 12222221110111 011111122345686 99999999999999999
Q ss_pred HHHHHHHHHcCCCCccEEEEEE
Q 022490 259 VAALNLVKECGVENKQIKVISA 280 (296)
Q Consensus 259 ~aAi~~Lk~~Ga~~k~I~v~~l 280 (296)
.++++.|++.|+ ++|.++++
T Consensus 375 ~~~~~~L~~aGA--~~V~v~v~ 394 (501)
T PRK09246 375 EQIVQMAREAGA--KKVYFASA 394 (501)
T ss_pred HHHHHHHHHcCC--CEEEEEEE
Confidence 999999999998 67877764
No 66
>TIGR01743 purR_Bsub pur operon repressor, Bacillus subtilis type. This model represents the puring operon repressor PurR of low-GC Gram-positive bacteria. This homodimeric repressor contains a large region homologous to phosphoribosyltransferases and is inhibited by 5-phosphoribosyl 1-pyrophosphate.
Probab=98.06 E-value=1.6e-05 Score=74.88 Aligned_cols=52 Identities=23% Similarity=0.420 Sum_probs=42.1
Q ss_pred CCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeChHHHHHHH
Q 022490 238 KFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLS 291 (296)
Q Consensus 238 dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas~~Gle~l~ 291 (296)
.+.+|++|+||||+++||+|+.++++++++.|+.+ +-+++++...+|-+++.
T Consensus 190 ~l~~G~rVLIVDDv~~TGgTi~a~i~Ll~e~Ga~V--vGv~vlve~~~~~~~l~ 241 (268)
T TIGR01743 190 SLKTGSKVLIIDDFMKAGGTINGMINLLDEFDAEV--AGIGVLIDNEGVDEKLV 241 (268)
T ss_pred hCCCcCEEEEEeeecccCHHHHHHHHHHHHCCCEE--EEEEEEEECCCChHHcC
Confidence 35469999999999999999999999999999843 45556677767766654
No 67
>PRK08341 amidophosphoribosyltransferase; Provisional
Probab=98.05 E-value=1.5e-05 Score=79.82 Aligned_cols=87 Identities=17% Similarity=0.245 Sum_probs=53.5
Q ss_pred EEEEecCcchHHHHHHHccCCC-ceeEEEEE-e--ec-----CCCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHH
Q 022490 190 AVIPILRAGLVLVEHASSILPA-IKTYHLGI-S--RD-----EETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVA 260 (296)
Q Consensus 190 viV~ILRaGl~m~~~l~k~lP~-a~ig~I~i-~--rd-----~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~a 260 (296)
++|+|=.+|..++.++.+.+.- ...+.+.. | |. .+..........+...++ ||+|+||||+++||.|+.+
T Consensus 274 ~Vv~VPdsg~~~A~~~a~~lgip~~~~l~k~r~~~rtfi~~~qr~~~~~~k~~~~~~~v~-gk~VlLVDD~IttGtTl~~ 352 (442)
T PRK08341 274 VVIAVPDSGRTAALGFAHESGIPYMEGLIKNRYIGRTFIMPSGRELKVKLKLSPVREVIN-GKRVVLVDDSIVRGTTMKR 352 (442)
T ss_pred eEEEecCchHHHHHHHHHHhCCCchheEEEeccccccccCcCchhhhheeeecccccccC-CCEEEEEeeeeccHHHHHH
Confidence 4566666777777777665421 11122211 0 00 011111122233445676 9999999999999999999
Q ss_pred HHHHHHHcCCCCccEEEEE
Q 022490 261 ALNLVKECGVENKQIKVIS 279 (296)
Q Consensus 261 Ai~~Lk~~Ga~~k~I~v~~ 279 (296)
+++.|++.|+ ++|.+..
T Consensus 353 ~~~~L~~aGA--k~V~~~~ 369 (442)
T PRK08341 353 IVKMLRDAGA--REVHVRI 369 (442)
T ss_pred HHHHHHhcCC--cEEEEEE
Confidence 9999999999 5565544
No 68
>COG0461 PyrE Orotate phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=98.00 E-value=4.2e-05 Score=69.33 Aligned_cols=51 Identities=24% Similarity=0.522 Sum_probs=42.9
Q ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeChHHHHHHHHh
Q 022490 241 EGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSEN 293 (296)
Q Consensus 241 ~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas~~Gle~l~~~ 293 (296)
+|++|+||||+++||+|+..|++.|++.|+.+ +-+++++.-.+|.+...++
T Consensus 111 ~G~kVvvVEDViTTG~Si~eai~~l~~~G~~V--~gv~~ivDR~~~~~~~~~~ 161 (201)
T COG0461 111 KGEKVVVVEDVITTGGSILEAVEALREAGAEV--VGVAVIVDRQSGAKEVLKE 161 (201)
T ss_pred CCCEEEEEEecccCCHhHHHHHHHHHHcCCeE--EEEEEEEecchhHHHHHHh
Confidence 49999999999999999999999999999854 5567777776777766654
No 69
>PRK09213 pur operon repressor; Provisional
Probab=97.99 E-value=2.6e-05 Score=73.59 Aligned_cols=52 Identities=29% Similarity=0.504 Sum_probs=41.5
Q ss_pred CCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeChHHHHHHH
Q 022490 238 KFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLS 291 (296)
Q Consensus 238 dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas~~Gle~l~ 291 (296)
.+.+|++||||||+++||+|+.++++++++.|+.+ +-+++++...++-+++.
T Consensus 192 ~l~~G~rVLIVDDv~~TGgTi~a~i~Ll~e~Ga~V--vGv~vlVd~~~~~~~l~ 243 (271)
T PRK09213 192 SLKEGSRVLIVDDFMKAGGTINGMISLLKEFDAEV--VGIGVLVETKEPEERLV 243 (271)
T ss_pred hcCCcCEEEEEeeecccCHhHHHHHHHHHHCCCEE--EEEEEEEECCCChhhcC
Confidence 35569999999999999999999999999999844 44555666666666553
No 70
>COG0856 Orotate phosphoribosyltransferase homologs [Nucleotide transport and metabolism]
Probab=97.89 E-value=3.9e-05 Score=68.28 Aligned_cols=97 Identities=21% Similarity=0.341 Sum_probs=61.6
Q ss_pred EEEEecCcchHHHHHHHccCC-CceeEEEEE-eecCCCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHH
Q 022490 190 AVIPILRAGLVLVEHASSILP-AIKTYHLGI-SRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKE 267 (296)
Q Consensus 190 viV~ILRaGl~m~~~l~k~lP-~a~ig~I~i-~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~ 267 (296)
++|.|--+|.+++......+. +..+|+=.- +.++.....-.+..++ ..+. ||+++||||++.||.|+..+++.|++
T Consensus 89 vVvGIa~sGvPlAtmvA~elg~elaiY~PrK~~~de~~~~~G~iS~NF-a~V~-gK~cvIVDDvittG~Ti~E~Ie~lke 166 (203)
T COG0856 89 VVVGIAISGVPLATMVAYELGKELAIYHPRKHRKDEGAGKGGSISSNF-ASVE-GKRCVIVDDVITTGSTIKETIEQLKE 166 (203)
T ss_pred EEEEEeecCccHHHHHHHHhCCceEEEecccccccccCCcCceeeccc-cccc-CceEEEEecccccChhHHHHHHHHHH
Confidence 567777788888776665443 222222111 1111111000111222 2576 99999999999999999999999999
Q ss_pred cCCCCccEEEEEEeeChHHHHHHH
Q 022490 268 CGVENKQIKVISAVAAPPALQKLS 291 (296)
Q Consensus 268 ~Ga~~k~I~v~~lIas~~Gle~l~ 291 (296)
.|+++ + ++++++.+.|+..+.
T Consensus 167 ~g~kp--v-~v~VL~dK~G~dei~ 187 (203)
T COG0856 167 EGGKP--V-LVVVLADKKGVDEIE 187 (203)
T ss_pred cCCCc--E-EEEEEEccCCccccc
Confidence 99843 3 667778888876553
No 71
>PRK07349 amidophosphoribosyltransferase; Provisional
Probab=97.85 E-value=6.7e-05 Score=76.31 Aligned_cols=85 Identities=18% Similarity=0.219 Sum_probs=54.2
Q ss_pred EEEEecCcchHHHHHHHccCCC-ceeEEEEE-eecC---------CCCcceeeecCCCCCCCCCCEEEEEcCcccchHHH
Q 022490 190 AVIPILRAGLVLVEHASSILPA-IKTYHLGI-SRDE---------ETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTV 258 (296)
Q Consensus 190 viV~ILRaGl~m~~~l~k~lP~-a~ig~I~i-~rd~---------~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl 258 (296)
++|+|-.+|++.+.++.+.+.- ...+.+.- |... ++......+..+...++ ||+|+||||++.||.|+
T Consensus 315 vVv~VP~sg~~~A~g~A~~lgip~~~~L~r~~y~grtfi~p~q~~R~~~~~~kl~~~~~~~~-gkrVlLVDDvIttGtTl 393 (500)
T PRK07349 315 LVIGVPDSGIPAAIGFSQASGIPYAEGLIKNRYVGRTFIQPTQSMRESGIRMKLNPLKDVLA-GKRIIIVDDSIVRGTTS 393 (500)
T ss_pred EEEEeccccHHHHHHHHHHHCCCchhceEEEeccCccccCCCHHHHHhhhheeeeccccccC-CCEEEEEeceeCCcHHH
Confidence 5677778888888888775421 11222211 1100 00111122233455666 99999999999999999
Q ss_pred HHHHHHHHHcCCCCccEEE
Q 022490 259 VAALNLVKECGVENKQIKV 277 (296)
Q Consensus 259 ~aAi~~Lk~~Ga~~k~I~v 277 (296)
.++++.|++.|+ ++|.+
T Consensus 394 ~~~~~~Lr~aGA--keV~~ 410 (500)
T PRK07349 394 RKIVKALRDAGA--TEVHM 410 (500)
T ss_pred HHHHHHHHHhCC--eEEEE
Confidence 999999999999 44544
No 72
>PRK05500 bifunctional orotidine 5'-phosphate decarboxylase/orotate phosphoribosyltransferase protein; Validated
Probab=97.84 E-value=0.0001 Score=74.69 Aligned_cols=94 Identities=17% Similarity=0.201 Sum_probs=60.0
Q ss_pred EEEEecCcchHHHHHHHccCCCceeEEEEEeecC-CCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHc
Q 022490 190 AVIPILRAGLVLVEHASSILPAIKTYHLGISRDE-ETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKEC 268 (296)
Q Consensus 190 viV~ILRaGl~m~~~l~k~lP~a~ig~I~i~rd~-~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~ 268 (296)
+++.+=-+|++++..+...+ +.++ +-..+.. ..++.... -+.+.+|++|+||||+++||+|+.++++.|++.
T Consensus 347 ~I~Gia~gGiPlAt~lA~~l-g~p~--v~vRKe~K~~G~~~~i----eG~~~~G~rVlIVDDViTTGgSi~eaie~l~~a 419 (477)
T PRK05500 347 RIAGIPYGSLPTATGLALHL-HHPM--IFPRKEVKAHGTRRLI----EGNFHPGETVVVVDDILITGKSVMEGAEKLKSA 419 (477)
T ss_pred EEEEEccchHHHHHHHHHHh-CCCE--EEEecCcCccCCCceE----ecCCCCcCEEEEEEeccccCHHHHHHHHHHHHC
Confidence 45566678888887776544 3333 2222221 11211111 234546999999999999999999999999999
Q ss_pred CCCCccEEEEEEeeChHH-HHHHHH
Q 022490 269 GVENKQIKVISAVAAPPA-LQKLSE 292 (296)
Q Consensus 269 Ga~~k~I~v~~lIas~~G-le~l~~ 292 (296)
|+.+ +-+++++.-.+| .+++.+
T Consensus 420 G~~V--~~v~vlVDR~~g~~~~L~~ 442 (477)
T PRK05500 420 GLNV--RDIVVFIDHEQGVKDKLQS 442 (477)
T ss_pred CCEE--EEEEEEEECCcchHHHHHh
Confidence 9844 445566664444 566644
No 73
>TIGR01134 purF amidophosphoribosyltransferase. Alternate name: glutamine phosphoribosylpyrophosphate (PRPP) amidotransferase.
Probab=97.72 E-value=6e-05 Score=75.47 Aligned_cols=42 Identities=29% Similarity=0.526 Sum_probs=35.8
Q ss_pred CCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEE
Q 022490 236 PEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISA 280 (296)
Q Consensus 236 P~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~l 280 (296)
...++ ||+|+||||++.||.|+.++++.|++.|+ ++|.+++.
T Consensus 333 ~~~~~-gk~v~lvDD~ittG~T~~~~~~~l~~~ga--~~v~~~~~ 374 (442)
T TIGR01134 333 REVFR-GKRVVLVDDSIVRGTTSRQIVKMLRDAGA--KEVHVRIA 374 (442)
T ss_pred cccCC-CCEEEEEeccccccHHHHHHHHHHHHcCC--cEEEEEEc
Confidence 34576 99999999999999999999999999998 56765443
No 74
>PRK07272 amidophosphoribosyltransferase; Provisional
Probab=97.70 E-value=7e-05 Score=75.89 Aligned_cols=42 Identities=31% Similarity=0.477 Sum_probs=37.0
Q ss_pred CCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEE
Q 022490 236 PEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISA 280 (296)
Q Consensus 236 P~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~l 280 (296)
...++ ||+|+||||++.||.|+.++++.|++.|+ ++|.+++.
T Consensus 345 ~~~~~-gk~vllVDDvittG~T~~~~~~~L~~~Ga--~~v~~~~~ 386 (484)
T PRK07272 345 SGVVK-GKRVVMVDDSIVRGTTSRRIVQLLKEAGA--KEVHVAIA 386 (484)
T ss_pred ccccC-CCEEEEEccccCchHHHHHHHHHHHhcCC--cEEEEEEe
Confidence 45676 99999999999999999999999999999 56766665
No 75
>PRK06781 amidophosphoribosyltransferase; Provisional
Probab=97.65 E-value=0.00015 Score=73.36 Aligned_cols=40 Identities=20% Similarity=0.464 Sum_probs=34.6
Q ss_pred CCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEE
Q 022490 235 LPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKV 277 (296)
Q Consensus 235 LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v 277 (296)
+...++ ||+|+||||++.||.|+.++++.|++.|+ ++|.+
T Consensus 342 ~~~~i~-gk~VlLVDDvittGtTl~~~~~~Lk~aGA--~eV~v 381 (471)
T PRK06781 342 VRGVVE-GKRVVMIDDSIVRGTTSKRIVRMLREAGA--TEVHV 381 (471)
T ss_pred cccccC-CceEEEEeceeccchHHHHHHHHHHHcCC--cEEEE
Confidence 355676 99999999999999999999999999999 45544
No 76
>PRK07631 amidophosphoribosyltransferase; Provisional
Probab=97.62 E-value=0.00017 Score=73.08 Aligned_cols=40 Identities=23% Similarity=0.431 Sum_probs=34.6
Q ss_pred CCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEE
Q 022490 236 PEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVI 278 (296)
Q Consensus 236 P~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~ 278 (296)
...++ ||+|+||||++.||.|+.++++.|++.|+ ++|.+.
T Consensus 343 ~~~v~-gk~VlLVDDsittGtTl~~~~~~L~~aGA--~eV~v~ 382 (475)
T PRK07631 343 RGVVE-GKRVVMVDDSIVRGTTSRRIVTMLREAGA--TEVHVR 382 (475)
T ss_pred ccccC-CceEEEEeeeeccHHHHHHHHHHHHHcCC--CEEEEE
Confidence 45676 99999999999999999999999999999 455443
No 77
>PRK07847 amidophosphoribosyltransferase; Provisional
Probab=97.61 E-value=0.00022 Score=72.74 Aligned_cols=40 Identities=33% Similarity=0.562 Sum_probs=34.3
Q ss_pred CCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEE
Q 022490 235 LPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKV 277 (296)
Q Consensus 235 LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v 277 (296)
+...++ ||+||||||+++||.|+.++++.|++.|+ ++|.+
T Consensus 361 ~~~~~~-gk~vllVDD~ittG~T~~~~~~~L~~~ga--~~v~~ 400 (510)
T PRK07847 361 LREVIR-GKRLVVVDDSIVRGNTQRALVRMLREAGA--AEVHV 400 (510)
T ss_pred cccccC-CCEEEEEecccCchHHHHHHHHHHHHcCC--CEEEE
Confidence 444576 99999999999999999999999999998 45543
No 78
>PRK06388 amidophosphoribosyltransferase; Provisional
Probab=97.35 E-value=0.00031 Score=71.10 Aligned_cols=40 Identities=28% Similarity=0.553 Sum_probs=34.0
Q ss_pred CCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEE
Q 022490 235 LPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKV 277 (296)
Q Consensus 235 LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v 277 (296)
+...++ ||+||||||++.||.|+.++++.|++.|+ ++|.+
T Consensus 350 ~~~~i~-gk~VlLVDDsittGtTl~~~~~~L~~aGa--k~V~~ 389 (474)
T PRK06388 350 IREVIS-GKRIVLVDDSIVRGNTMRFIVKIMRKYGA--KEVHV 389 (474)
T ss_pred cccccc-CceEEEEeCeECcHHHHHHHHHHHHHcCC--CEEEE
Confidence 334566 99999999999999999999999999998 44543
No 79
>COG0034 PurF Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]
Probab=96.37 E-value=0.0024 Score=64.17 Aligned_cols=45 Identities=29% Similarity=0.494 Sum_probs=37.7
Q ss_pred ecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEE
Q 022490 232 LNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVIS 279 (296)
Q Consensus 232 ~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~ 279 (296)
.+.+..-++ ||+|+||||=|=.|.|....+++|+++|| ++|.+..
T Consensus 339 Lnpvr~~v~-GKrVvlVDDSIVRGTTsr~IV~mlReAGA--kEVHvri 383 (470)
T COG0034 339 LNPVREVVK-GKRVVLVDDSIVRGTTSRRIVQMLREAGA--KEVHVRI 383 (470)
T ss_pred cCchHHHhC-CCeEEEEccccccCccHHHHHHHHHHhCC--CEEEEEe
Confidence 344556676 99999999999999999999999999999 5565543
No 80
>PF15609 PRTase_2: Phosphoribosyl transferase
Probab=96.35 E-value=0.011 Score=53.32 Aligned_cols=46 Identities=17% Similarity=0.185 Sum_probs=39.9
Q ss_pred CCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCh
Q 022490 238 KFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAP 284 (296)
Q Consensus 238 dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas~ 284 (296)
.+...+.++||||=+.||+|+...++.|++.-. .+++.+++++.-.
T Consensus 117 ~l~~~~~lVLVDDEiSTG~T~lnli~al~~~~p-~~~yvvasL~d~~ 162 (191)
T PF15609_consen 117 LLRNARTLVLVDDEISTGNTFLNLIRALHAKYP-RKRYVVASLLDWR 162 (191)
T ss_pred HhcCCCCEEEEecCccchHHHHHHHHHHHHhCC-CceEEEEEEeeCC
Confidence 344468999999999999999999999999865 6899999998853
No 81
>KOG0572 consensus Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]
Probab=95.65 E-value=0.0065 Score=60.08 Aligned_cols=76 Identities=21% Similarity=0.337 Sum_probs=50.9
Q ss_pred CcchHHHHHHHccCCCceeEEEEEeecC--CCCcceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCc
Q 022490 196 RAGLVLVEHASSILPAIKTYHLGISRDE--ETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENK 273 (296)
Q Consensus 196 RaGl~m~~~l~k~lP~a~ig~I~i~rd~--~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k 273 (296)
.+|+++.+.|.+ +.=+|.--+.-+. +...+...+..++..++ ||+|+||||-|--|.|....+++|++.||+
T Consensus 312 ~sG~py~e~l~r---nrYvGRTFI~P~q~iR~~~V~~Kl~~l~~~~~-GKrvvlVDDSIVRGtTs~~IVkmlreaGAk-- 385 (474)
T KOG0572|consen 312 KSGLPYQEVLIR---NRYVGRTFIEPNQRIRQLGVKKKLGPLRQNFE-GKRVVLVDDSIVRGTTSSPIVKMLREAGAK-- 385 (474)
T ss_pred HhCCchhhhhhh---cccccceecCccHHHHHhhhhhhcccchhhcC-CceEEEEecceeccCchHHHHHHHHHcCCc--
Confidence 467778777765 2112211121111 11122233456788897 999999999999999999999999999995
Q ss_pred cEEE
Q 022490 274 QIKV 277 (296)
Q Consensus 274 ~I~v 277 (296)
+|.+
T Consensus 386 eVh~ 389 (474)
T KOG0572|consen 386 EVHI 389 (474)
T ss_pred EEEE
Confidence 4544
No 82
>KOG1503 consensus Phosphoribosylpyrophosphate synthetase-associated protein [Amino acid transport and metabolism; Nucleotide transport and metabolism]
Probab=93.27 E-value=0.11 Score=48.86 Aligned_cols=40 Identities=28% Similarity=0.375 Sum_probs=36.4
Q ss_pred CCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEE
Q 022490 237 EKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVIS 279 (296)
Q Consensus 237 ~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~ 279 (296)
+|+. |+-.++|||++|.-.+..+|.+.||++|+ -+|++++
T Consensus 243 gdvg-griaimvddiiddvqsfvaaae~lkerga--ykiyv~a 282 (354)
T KOG1503|consen 243 GDVG-GRIAIMVDDIIDDVQSFVAAAEVLKERGA--YKIYVMA 282 (354)
T ss_pred eccC-ceEEEEehhhHHhHHHHHHHHHHHHhcCc--eEEEEEe
Confidence 5786 99999999999999999999999999998 5787776
No 83
>PF15610 PRTase_3: PRTase ComF-like
Probab=84.94 E-value=1.5 Score=41.73 Aligned_cols=33 Identities=24% Similarity=0.418 Sum_probs=30.8
Q ss_pred CCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCC
Q 022490 238 KFPEGSRIFVVDPMLATGGTVVAALNLVKECGVE 271 (296)
Q Consensus 238 dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~ 271 (296)
.++ ||.+|++|||.-||++-.++.+.+++.|+.
T Consensus 135 ~l~-gk~lIflDDIkITGshE~~V~~~~~~~~~~ 167 (274)
T PF15610_consen 135 FLS-GKHLIFLDDIKITGSHEDKVRKILKEYGLE 167 (274)
T ss_pred HhC-CcEEEEeccEEecCcHHHHHHHHHHHcCcc
Confidence 465 999999999999999999999999999994
No 84
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=71.31 E-value=15 Score=30.53 Aligned_cols=48 Identities=27% Similarity=0.581 Sum_probs=38.1
Q ss_pred CCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeChHHHHHHHHhc
Q 022490 238 KFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENF 294 (296)
Q Consensus 238 dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas~~Gle~l~~~f 294 (296)
+++ +++|+|+ .+|++...++..|.+.|+ ++|.++. -+.+..+.+.+.|
T Consensus 9 ~l~-~~~vlvi----GaGg~ar~v~~~L~~~g~--~~i~i~n--Rt~~ra~~l~~~~ 56 (135)
T PF01488_consen 9 DLK-GKRVLVI----GAGGAARAVAAALAALGA--KEITIVN--RTPERAEALAEEF 56 (135)
T ss_dssp TGT-TSEEEEE----SSSHHHHHHHHHHHHTTS--SEEEEEE--SSHHHHHHHHHHH
T ss_pred CcC-CCEEEEE----CCHHHHHHHHHHHHHcCC--CEEEEEE--CCHHHHHHHHHHc
Confidence 686 8999985 689999999999999998 5676654 3566677777765
No 85
>PF13793 Pribosyltran_N: N-terminal domain of ribose phosphate pyrophosphokinase; PDB: 2JI4_A 1DKU_B 1IBS_B 1DKR_B 3MBI_C 3LRT_B 3LPN_B 3NAG_B 2H07_B 2H06_B ....
Probab=67.48 E-value=69 Score=26.38 Aligned_cols=77 Identities=16% Similarity=0.279 Sum_probs=46.4
Q ss_pred cCcchHHHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccc--hH--HHHHHHHHHHHcCC
Q 022490 195 LRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLAT--GG--TVVAALNLVKECGV 270 (296)
Q Consensus 195 LRaGl~m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLAT--G~--Tl~aAi~~Lk~~Ga 270 (296)
..+.-.+++++.+.+ +.+.+.+...+= ..+| .|.++++++. |++|+|+=.+... -. -+.-.++.+++.|+
T Consensus 6 g~~~~~La~~ia~~L-~~~~~~~~~~~F-~dGE---~~v~i~~~v~-g~dv~iiqs~~~~~nd~lmeLll~i~a~r~~~a 79 (116)
T PF13793_consen 6 GSSSQDLAERIAEAL-GIPLGKVETKRF-PDGE---TYVRIPESVR-GKDVFIIQSTSPPVNDNLMELLLLIDALRRAGA 79 (116)
T ss_dssp SSSGHHHHHHHHHHT-TS-EE-EEEEE--TTS----EEEEESS--T-TSEEEEE---SSSHHHHHHHHHHHHHHHHHTTB
T ss_pred CCCCHHHHHHHHHHh-CCceeeeEEEEc-CCCC---EEEEeccccc-CCceEEEEecCCchhHHHHHHHHHHHHHHHcCC
Confidence 456778888888866 456666665442 1232 2566788998 9999999888864 11 34556788899998
Q ss_pred CCccEEEEE
Q 022490 271 ENKQIKVIS 279 (296)
Q Consensus 271 ~~k~I~v~~ 279 (296)
++|.++.
T Consensus 80 --~~i~~Vi 86 (116)
T PF13793_consen 80 --KRITLVI 86 (116)
T ss_dssp --SEEEEEE
T ss_pred --cEEEEec
Confidence 6776654
No 86
>PRK02812 ribose-phosphate pyrophosphokinase; Provisional
Probab=66.56 E-value=56 Score=31.86 Aligned_cols=89 Identities=10% Similarity=0.218 Sum_probs=60.2
Q ss_pred eCCCCCEEEEEecCcchHHHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccc-hHH---H
Q 022490 183 IDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLAT-GGT---V 258 (296)
Q Consensus 183 i~~~~~iviV~ILRaGl~m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLAT-G~T---l 258 (296)
+.+.+++.+++ ..+...+++.+.+.+ +.+.+.+...+= ..+| .|.++++++. |++|+|+-.+... ... +
T Consensus 16 ~~~~~~~~i~~-g~~~~~la~~ia~~l-g~~l~~~~~~~F-pDGE---~~v~i~~~vr-g~~V~ivqs~~~p~nd~l~eL 88 (330)
T PRK02812 16 LSDNNRLRLFS-GSSNPALAQEVARYL-GMDLGPMIRKRF-ADGE---LYVQIQESIR-GCDVYLIQPTCAPVNDHLMEL 88 (330)
T ss_pred ccCCCCEEEEE-CCCCHHHHHHHHHHh-CCCceeeEEEEC-CCCC---EEEEeCCCCC-CCEEEEECCCCCCccHHHHHH
Confidence 33335566666 578888999888865 566777666442 2233 2577888997 9999999986432 222 4
Q ss_pred HHHHHHHHHcCCCCccEEEEEE
Q 022490 259 VAALNLVKECGVENKQIKVISA 280 (296)
Q Consensus 259 ~aAi~~Lk~~Ga~~k~I~v~~l 280 (296)
.-.++.+++.|+ ++|.++.-
T Consensus 89 ll~~~alr~~ga--~ri~~ViP 108 (330)
T PRK02812 89 LIMVDACRRASA--RQITAVIP 108 (330)
T ss_pred HHHHHHHHHhCC--ceEEEEEe
Confidence 567788899998 67876653
No 87
>smart00450 RHOD Rhodanese Homology Domain. An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.
Probab=63.99 E-value=19 Score=26.44 Aligned_cols=45 Identities=18% Similarity=0.220 Sum_probs=33.8
Q ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeChHHHHHHHHhcC
Q 022490 241 EGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFH 295 (296)
Q Consensus 241 ~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas~~Gle~l~~~fP 295 (296)
+++.|++.+ .+|.....+...|++.|. +++.++ ..|.+...+++|
T Consensus 55 ~~~~iv~~c---~~g~~a~~~~~~l~~~G~--~~v~~l-----~GG~~~w~~~~~ 99 (100)
T smart00450 55 KDKPVVVYC---RSGNRSAKAAWLLRELGF--KNVYLL-----DGGYKEWSAAGP 99 (100)
T ss_pred CCCeEEEEe---CCCcHHHHHHHHHHHcCC--CceEEe-----cCCHHHHHhcCC
Confidence 478999998 678888999999999998 454432 447777776665
No 88
>PRK02269 ribose-phosphate pyrophosphokinase; Provisional
Probab=57.00 E-value=1.1e+02 Score=29.57 Aligned_cols=84 Identities=12% Similarity=0.210 Sum_probs=55.7
Q ss_pred CEEEEEecCcchHHHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCccc----chHHHHHHHH
Q 022490 188 PVAVIPILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLA----TGGTVVAALN 263 (296)
Q Consensus 188 ~iviV~ILRaGl~m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLA----TG~Tl~aAi~ 263 (296)
++.+++ +.+...+++++.+.+ +.+.+.+...+= ..+| .|.++++++. |++|+|+-.+-. .=--+.-.++
T Consensus 5 ~~~i~~-~~~~~~la~~ia~~l-g~~l~~~~~~~F-pdGE---~~v~i~~~vr-g~dV~iv~s~~~~~nd~lmelll~~~ 77 (320)
T PRK02269 5 DLKLFA-LSSNKELAEKVAQEI-GIELGKSSVRQF-SDGE---IQVNIEESIR-GHHVFILQSTSSPVNDNLMEILIMVD 77 (320)
T ss_pred CeEEEE-CCCCHHHHHHHHHHh-CCceeeeEEEEC-CCCC---EEEEECCCCC-CCEEEEEecCCCCccchHHHHHHHHH
Confidence 345555 577788888888765 566666666441 1233 2567788897 999999966432 1123566778
Q ss_pred HHHHcCCCCccEEEEEE
Q 022490 264 LVKECGVENKQIKVISA 280 (296)
Q Consensus 264 ~Lk~~Ga~~k~I~v~~l 280 (296)
.|++.|+ ++|.++.-
T Consensus 78 alr~~~a--~~i~~V~P 92 (320)
T PRK02269 78 ALKRASA--ESINVVMP 92 (320)
T ss_pred HHHHhCC--CeEEEEEe
Confidence 8999998 67866653
No 89
>PRK00553 ribose-phosphate pyrophosphokinase; Provisional
Probab=56.81 E-value=1e+02 Score=30.05 Aligned_cols=85 Identities=14% Similarity=0.195 Sum_probs=57.6
Q ss_pred CCEEEEEecCcchHHHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccc-hHH---HHHHH
Q 022490 187 EPVAVIPILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLAT-GGT---VVAAL 262 (296)
Q Consensus 187 ~~iviV~ILRaGl~m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLAT-G~T---l~aAi 262 (296)
+++.+++ ..+...+++.+.+.+ +.+.+.+...+= ..+| .|.++.+++. |++|+|+=++-.. ... +...+
T Consensus 8 ~~~~i~~-~~~~~~La~~ia~~l-g~~l~~~~~~~F-pdGE---~~v~i~~~vr-g~dV~ivqs~~~p~nd~l~eLll~~ 80 (332)
T PRK00553 8 SNHVIFS-LSKAKKLVDSICRKL-SMKPGEIVIQKF-ADGE---TYIRFDESVR-NKDVVIFQSTCSPVNDSLMELLIAI 80 (332)
T ss_pred CCeEEEE-CCCCHHHHHHHHHHh-CCceeeeEEEEC-CCCC---EEEEECCCCC-CCEEEEEcCCCCCCchHHHHHHHHH
Confidence 4555555 577888888888765 577777777552 1233 2567778997 9999999876432 112 45577
Q ss_pred HHHHHcCCCCccEEEEEE
Q 022490 263 NLVKECGVENKQIKVISA 280 (296)
Q Consensus 263 ~~Lk~~Ga~~k~I~v~~l 280 (296)
+.|++.|+ ++|.++.-
T Consensus 81 ~alr~~~a--~~i~~ViP 96 (332)
T PRK00553 81 DALKRGSA--KSITAILP 96 (332)
T ss_pred HHHHHcCC--CeEEEEee
Confidence 78889998 67866653
No 90
>PRK04923 ribose-phosphate pyrophosphokinase; Provisional
Probab=54.86 E-value=1.2e+02 Score=29.45 Aligned_cols=84 Identities=13% Similarity=0.182 Sum_probs=54.6
Q ss_pred CEEEEEecCcchHHHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccch----HHHHHHHH
Q 022490 188 PVAVIPILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATG----GTVVAALN 263 (296)
Q Consensus 188 ~iviV~ILRaGl~m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG----~Tl~aAi~ 263 (296)
++.+++ +.+...+++.+.+.+ +.+.+.+...+= ..+| .|.++++++. |++|+|+=.+-... --+.-.++
T Consensus 6 ~~~i~~-g~~~~~La~~ia~~l-g~~l~~~~~~~F-pdGE---~~v~i~~~v~-g~~V~iiqs~~~p~nd~lmeLl~~~~ 78 (319)
T PRK04923 6 NLLVFS-GNANKPLAQSICKEL-GVRMGKALVTRF-SDGE---VQVEIEESVR-RQEVFVIQPTCAPSAENLMELLVLID 78 (319)
T ss_pred ceEEEE-CCCCHHHHHHHHHHh-CCceeeeEEEEC-CCCC---EEEEECCCcC-CCeEEEEecCCCCCchHHHHHHHHHH
Confidence 445555 577788888888865 566777666442 1233 2567788897 99999985432211 13445667
Q ss_pred HHHHcCCCCccEEEEEE
Q 022490 264 LVKECGVENKQIKVISA 280 (296)
Q Consensus 264 ~Lk~~Ga~~k~I~v~~l 280 (296)
.|++.|+ ++|.++.-
T Consensus 79 alr~~~a--~~i~~ViP 93 (319)
T PRK04923 79 ALKRASA--ASVTAVIP 93 (319)
T ss_pred HHHHcCC--cEEEEEee
Confidence 8889998 67876653
No 91
>PTZ00145 phosphoribosylpyrophosphate synthetase; Provisional
Probab=49.88 E-value=1.3e+02 Score=30.83 Aligned_cols=85 Identities=11% Similarity=0.179 Sum_probs=57.9
Q ss_pred CCEEEEEecCcchHHHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccc-h---HHHHHHH
Q 022490 187 EPVAVIPILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLAT-G---GTVVAAL 262 (296)
Q Consensus 187 ~~iviV~ILRaGl~m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLAT-G---~Tl~aAi 262 (296)
+++++++ ..+...+++.+.+.+ +.+.+.+...+= ..+| .|.++++++. |+.|+||-++-.. - --+.-++
T Consensus 118 ~~m~I~s-gs~~~~LA~~IA~~L-g~~l~~~~~~rF-pDGE---~~Vri~e~Vr-G~dV~IVqS~~~pvNd~LmELLlli 190 (439)
T PTZ00145 118 ENAILFS-GSSNPLLSKNIADHL-GTILGRVHLKRF-ADGE---VSMQFLESIR-GKDVYIIQPTCPPVNENLIELLLMI 190 (439)
T ss_pred CCeEEEE-CCCCHHHHHHHHHHh-CCCceeeEEEEC-CCCC---EEEEECCCcC-CCeEEEEecCCCCCcHHHHHHHHHH
Confidence 4466665 578888999888865 567777777552 1233 2566788997 9999999875322 1 2345567
Q ss_pred HHHHHcCCCCccEEEEEE
Q 022490 263 NLVKECGVENKQIKVISA 280 (296)
Q Consensus 263 ~~Lk~~Ga~~k~I~v~~l 280 (296)
+.+++.|+ ++|.++.-
T Consensus 191 dAlr~agA--krItlViP 206 (439)
T PTZ00145 191 STCRRASA--KKITAVIP 206 (439)
T ss_pred HHHHHhcc--CeEEEEee
Confidence 78889998 67876663
No 92
>TIGR01251 ribP_PPkin ribose-phosphate pyrophosphokinase. In some systems, close homologs lacking enzymatic activity exist and perform regulatory functions. The model is designated subfamily rather than equivalog for this reason.
Probab=46.88 E-value=1.7e+02 Score=27.91 Aligned_cols=78 Identities=13% Similarity=0.191 Sum_probs=49.8
Q ss_pred cCcchHHHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEE-cCccc----chHHHHHHHHHHHHcC
Q 022490 195 LRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVV-DPMLA----TGGTVVAALNLVKECG 269 (296)
Q Consensus 195 LRaGl~m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLV-DDmLA----TG~Tl~aAi~~Lk~~G 269 (296)
..+...+++++.+.+ +.+.+.+...+= ..+| .|.++++++. |++|+|+ -.+-. .=--+...++.+++.|
T Consensus 6 ~~~~~~la~~ia~~l-g~~~~~~~~~~F-pdGE---~~v~i~~~v~-g~~v~iv~~s~~~~~~~~l~el~~~~~a~r~~g 79 (308)
T TIGR01251 6 GSSNQELAQKVAKNL-GLPLGDVEVKRF-PDGE---LYVRINESVR-GKDVFIIQQSTSAPVNDNLMELLIMIDALKRAS 79 (308)
T ss_pred CCCCHHHHHHHHHHh-CCeeeeeEEEEC-CCCC---EEEEECCCCC-CCeEEEEeCCCCCCccHHHHHHHHHHHHHHHcC
Confidence 456667888887755 456666555331 1233 2567788897 9999999 54321 1124566778889999
Q ss_pred CCCccEEEEEE
Q 022490 270 VENKQIKVISA 280 (296)
Q Consensus 270 a~~k~I~v~~l 280 (296)
+ ++|.++.-
T Consensus 80 a--~~i~~v~P 88 (308)
T TIGR01251 80 A--KSITAVIP 88 (308)
T ss_pred C--CeEEEEEE
Confidence 8 67766653
No 93
>PRK02458 ribose-phosphate pyrophosphokinase; Provisional
Probab=46.49 E-value=2e+02 Score=27.85 Aligned_cols=85 Identities=11% Similarity=0.235 Sum_probs=56.7
Q ss_pred CCEEEEEecCcchHHHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccc-hHH---HHHHH
Q 022490 187 EPVAVIPILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLAT-GGT---VVAAL 262 (296)
Q Consensus 187 ~~iviV~ILRaGl~m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLAT-G~T---l~aAi 262 (296)
+++.+++ ..+...+++.+.+.+ +.+.+.+...+= ..+| .|.++++++. |+.|+|+-.+-.. -.. +...+
T Consensus 8 ~~~~i~~-~~~~~~la~~ia~~l-g~~l~~~~~~~F-pdGE---~~v~i~~~v~-g~dV~ii~s~~~~~nd~l~eLll~~ 80 (323)
T PRK02458 8 KQIKLFS-LNSNLEIAEKIAQAA-GVPLGKLSSRQF-SDGE---IMINIEESVR-GDDIYIIQSTSFPVNDHLWELLIMI 80 (323)
T ss_pred CCeEEEE-CCCCHHHHHHHHHHh-CCceeeeEEEEC-CCCC---EEEEecCCcC-CCeEEEEecCCCCCchHHHHHHHHH
Confidence 4566666 578888888888755 567777766441 1233 3677788997 9999999765322 222 34456
Q ss_pred HHHHHcCCCCccEEEEEE
Q 022490 263 NLVKECGVENKQIKVISA 280 (296)
Q Consensus 263 ~~Lk~~Ga~~k~I~v~~l 280 (296)
+.|++.|+ ++|.++.-
T Consensus 81 ~alr~~~a--~~i~lViP 96 (323)
T PRK02458 81 DACKRASA--NTVNVVLP 96 (323)
T ss_pred HHHHHcCC--ceEEEEEe
Confidence 78889998 67866664
No 94
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=43.22 E-value=68 Score=30.13 Aligned_cols=48 Identities=33% Similarity=0.456 Sum_probs=35.0
Q ss_pred CCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeChHHHHHHHHhc
Q 022490 238 KFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENF 294 (296)
Q Consensus 238 dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas~~Gle~l~~~f 294 (296)
+++ +++|+|+ .+|++..+++..|.+.|+ ++|.++.- +.+..+++.+.+
T Consensus 122 ~~~-~k~vlvl----GaGGaarai~~aL~~~G~--~~i~I~nR--t~~ka~~La~~~ 169 (282)
T TIGR01809 122 PLA-GFRGLVI----GAGGTSRAAVYALASLGV--TDITVINR--NPDKLSRLVDLG 169 (282)
T ss_pred ccC-CceEEEE----cCcHHHHHHHHHHHHcCC--CeEEEEeC--CHHHHHHHHHHh
Confidence 465 7888865 799999999999999998 56766542 345556665543
No 95
>COG0462 PrsA Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism]
Probab=42.85 E-value=1.5e+02 Score=28.99 Aligned_cols=78 Identities=14% Similarity=0.207 Sum_probs=55.0
Q ss_pred cCcchHHHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccchH----HHHHHHHHHHHcCC
Q 022490 195 LRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGG----TVVAALNLVKECGV 270 (296)
Q Consensus 195 LRaGl~m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~----Tl~aAi~~Lk~~Ga 270 (296)
+.+.-.+++++.+.+ +.+.|...+.|= ..+|. |.++.++++ |++|+|+...-...+ -+.-.++.+++.||
T Consensus 10 g~s~~~La~~ia~~l-~~~l~~~~~~rF-~DGE~---~V~i~EsVr-g~dVfI~qs~~~pvnd~lmELLi~idA~k~asA 83 (314)
T COG0462 10 GSSNPELAEKIAKRL-GIPLGKVEVKRF-PDGEI---YVRIEESVR-GKDVFIIQSTSPPVNDNLMELLIMIDALKRASA 83 (314)
T ss_pred CCCCHHHHHHHHHHh-CCCcccceeEEc-CCCcE---EEEeccccc-CCeEEEEeCCCCCcCHHHHHHHHHHHHHHhcCC
Confidence 477788888888854 456666666552 12332 577889998 999999998887555 23445678899998
Q ss_pred CCccEEEEEE
Q 022490 271 ENKQIKVISA 280 (296)
Q Consensus 271 ~~k~I~v~~l 280 (296)
++|.++.-
T Consensus 84 --~~It~ViP 91 (314)
T COG0462 84 --KRITAVIP 91 (314)
T ss_pred --ceEEEEee
Confidence 78876654
No 96
>PLN02297 ribose-phosphate pyrophosphokinase
Probab=42.68 E-value=3.3e+02 Score=26.58 Aligned_cols=87 Identities=8% Similarity=0.069 Sum_probs=57.2
Q ss_pred CCEEEEEecCcchHHHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccchHHH---HHHHH
Q 022490 187 EPVAVIPILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTV---VAALN 263 (296)
Q Consensus 187 ~~iviV~ILRaGl~m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~Tl---~aAi~ 263 (296)
+++.+++ ..+...+++++.+.+-+.+.+.+...+=. .+|.+ .+.++++++. |++|+|+=.+-.- ..+ .-+++
T Consensus 15 ~~~~i~~-g~~~~~LA~~ia~~l~g~~l~~~~~~~Fp-DGE~~-v~v~~~~~vr-g~~V~ivqs~~~p-d~lmELLl~~d 89 (326)
T PLN02297 15 KQVHLFY-CEETEELARKIAAESDAIELGSINWRKFP-DGFPN-LFINNAHGIR-GQHVAFLASFSSP-AVIFEQLSVIY 89 (326)
T ss_pred CCeEEEE-CCCCHHHHHHHHHHhCCCceeeeEEEECC-CCCEE-EEEcCCCCcC-CCeEEEECCCCCC-hHHHHHHHHHH
Confidence 4555655 57888999999886546777877775521 13321 2355678897 9999998775432 222 34566
Q ss_pred HHHHcCCCCccEEEEEE
Q 022490 264 LVKECGVENKQIKVISA 280 (296)
Q Consensus 264 ~Lk~~Ga~~k~I~v~~l 280 (296)
.|++.|+ ++|.++.-
T Consensus 90 Alr~~ga--~~i~~ViP 104 (326)
T PLN02297 90 ALPKLFV--ASFTLVLP 104 (326)
T ss_pred HHHHcCC--CEEEEEee
Confidence 7888898 67876664
No 97
>PF01555 N6_N4_Mtase: DNA methylase; InterPro: IPR002941 This domain is found in DNA methylases. In prokaryotes, the major role of DNA methylation is to protect host DNA against degradation by restriction enzymes. This family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases. N-4 cytosine-specific DNA methylases (2.1.1.113 from EC) [] are enzymes that specifically methylate the amino group at the C-4 position of cytosines in DNA. Such enzymes are found as components of type II restriction-modification systems in prokaryotes. Such enzymes recognise a specific sequence in DNA and methylate a cytosine in that sequence. By this action they protect DNA from cleavage by type II restriction enzymes that recognise the same sequence. N-6 adenine-specific DNA methylases (2.1.1.72 from EC) (A-Mtase) are enzymes that specifically methylate the amino group at the C-6 position of adenines in DNA. Such enzymes are found in the three existing types of bacterial restriction-modification systems (in type I system the A-Mtase is the product of the hsdM gene, and in type III it is the product of the mod gene). All of these enzymes recognise a specific sequence in DNA and methylate an adenine in that sequence.; GO: 0003677 DNA binding, 0008170 N-methyltransferase activity, 0006306 DNA methylation; PDB: 2ZIF_A 2ZIE_A 2ZIG_A 1NW6_A 1NW8_A 1NW7_A 1NW5_A 1EG2_A 1BOO_A 1G60_B ....
Probab=42.49 E-value=17 Score=31.35 Aligned_cols=19 Identities=42% Similarity=0.553 Sum_probs=15.2
Q ss_pred EEEEcCcccchHHHHHHHH
Q 022490 245 IFVVDPMLATGGTVVAALN 263 (296)
Q Consensus 245 VLLVDDmLATG~Tl~aAi~ 263 (296)
=+|+||...+|.|+.+|.+
T Consensus 193 diVlDpF~GSGTT~~aa~~ 211 (231)
T PF01555_consen 193 DIVLDPFAGSGTTAVAAEE 211 (231)
T ss_dssp -EEEETT-TTTHHHHHHHH
T ss_pred eeeehhhhccChHHHHHHH
Confidence 3679999999999998866
No 98
>PRK07199 phosphoribosylpyrophosphate synthetase; Provisional
Probab=40.56 E-value=2.4e+02 Score=26.99 Aligned_cols=77 Identities=12% Similarity=0.205 Sum_probs=51.4
Q ss_pred cCcchHHHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccchH---HHHHHHHHHHHcCCC
Q 022490 195 LRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGG---TVVAALNLVKECGVE 271 (296)
Q Consensus 195 LRaGl~m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~---Tl~aAi~~Lk~~Ga~ 271 (296)
..+.-.+++++.+.+ +.+.+.+...+= ..+|. |.++++++. |++|+|+-.+..--. -+.-.++.|++.|+
T Consensus 8 ~~~~~~la~~ia~~l-g~~~~~~~~~~F-~dGE~---~v~i~~~v~-g~~V~ivqs~~~~n~~l~elll~~~alr~~~a- 80 (301)
T PRK07199 8 LPGNEAAAGRLAAAL-GVEVGRIELHRF-PDGES---YVRLDSPVA-GRTVVLVCSLDRPDEKLLPLLFAAEAARELGA- 80 (301)
T ss_pred CCCCHHHHHHHHHHh-CCceeeeEEEEC-CCCCE---EEEECCCCC-CCEEEEECCCCCCcHHHHHHHHHHHHHHHcCC-
Confidence 466778888887755 566676666442 12332 466678897 999999988653222 34456678889998
Q ss_pred CccEEEEE
Q 022490 272 NKQIKVIS 279 (296)
Q Consensus 272 ~k~I~v~~ 279 (296)
++|.++.
T Consensus 81 -~~i~~Vi 87 (301)
T PRK07199 81 -RRVGLVA 87 (301)
T ss_pred -CeEEEEe
Confidence 6786665
No 99
>PRK06827 phosphoribosylpyrophosphate synthetase; Provisional
Probab=40.09 E-value=2.5e+02 Score=28.13 Aligned_cols=84 Identities=13% Similarity=0.183 Sum_probs=51.8
Q ss_pred CEEEEEecCcchHHHHHHHccC---------------C----C--ceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEE
Q 022490 188 PVAVIPILRAGLVLVEHASSIL---------------P----A--IKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIF 246 (296)
Q Consensus 188 ~iviV~ILRaGl~m~~~l~k~l---------------P----~--a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VL 246 (296)
++.+++ +.++..+++++.+.+ . + .+.+.+.+.+= ..+| .|.++++++. |++|+
T Consensus 8 ~~~i~~-~~~~~~la~~ia~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~F-pDGE---~~vri~~~Vr-g~dV~ 81 (382)
T PRK06827 8 SLGIIA-LPSCRELADKVDEHLVRIRERKENENIESLAFKGYSRESYLIPAKFIRF-SNGE---AKGEILESVR-GKDIY 81 (382)
T ss_pred ceEEEE-CCCCHHHHHHHHHHHHHhhhhccccccccccccccCCcceeeeeEEEEC-CCCC---EEEEECCCCC-CCeEE
Confidence 455666 678888888777665 1 2 12444444331 1233 2567788997 99999
Q ss_pred EEcCccc---------------chHHHH---HHHHHHHHcCCCCccEEEEEE
Q 022490 247 VVDPMLA---------------TGGTVV---AALNLVKECGVENKQIKVISA 280 (296)
Q Consensus 247 LVDDmLA---------------TG~Tl~---aAi~~Lk~~Ga~~k~I~v~~l 280 (296)
|+-++-. .-..++ -.++.|+ .|+ ++|.++.-
T Consensus 82 ivqs~~~~~v~~~~~~~~~~~p~nd~lmeLll~idalr-agA--~rIt~ViP 130 (382)
T PRK06827 82 ILQDVGNYSVTYNMFGEKNHMSPDDHFQDLKRTIDAIR-GKA--RRITVIMP 130 (382)
T ss_pred EEecCCcccccccccccccCCCCcHHHHHHHHHHHHHh-cCC--CeEEEEee
Confidence 9998652 122233 3778888 888 67876653
No 100
>cd01453 vWA_transcription_factor_IIH_type Transcription factors IIH type: TFIIH is a multiprotein complex that is one of the five general transcription factors that binds RNA polymerase II holoenzyme. Orthologues of these genes are found in all completed eukaryotic genomes and all these proteins contain a VWA domain. The p44 subunit of TFIIH functions as a DNA helicase in RNA polymerase II transcription initiation and DNA repair, and its transcriptional activity is dependent on its C-terminal Zn-binding domains. The function of the vWA domain is unclear, but may be involved in complex assembly. The MIDAS motif is not conserved in this sub-group.
Probab=37.91 E-value=90 Score=27.27 Aligned_cols=49 Identities=10% Similarity=0.265 Sum_probs=31.2
Q ss_pred CCEEEEEcCcccch-HHHHHHHHHHHHcCCCCccEEEEEEeeChHHHHHHHHh
Q 022490 242 GSRIFVVDPMLATG-GTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSEN 293 (296)
Q Consensus 242 gk~VLLVDDmLATG-~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas~~Gle~l~~~ 293 (296)
.+.|||++|.-+.+ ..+.++++.+++.|+ .|.++++=...+-+++++++
T Consensus 108 ~~iiil~sd~~~~~~~~~~~~~~~l~~~~I---~v~~IgiG~~~~~L~~ia~~ 157 (183)
T cd01453 108 REVLIIFSSLSTCDPGNIYETIDKLKKENI---RVSVIGLSAEMHICKEICKA 157 (183)
T ss_pred eEEEEEEcCCCcCChhhHHHHHHHHHHcCc---EEEEEEechHHHHHHHHHHH
Confidence 35677888865543 346678889999996 46666663333446666553
No 101
>PRK00934 ribose-phosphate pyrophosphokinase; Provisional
Probab=37.33 E-value=2.2e+02 Score=26.83 Aligned_cols=77 Identities=10% Similarity=0.205 Sum_probs=50.9
Q ss_pred cCcchHHHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccchH---HHHHHHHHHHHcCCC
Q 022490 195 LRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGG---TVVAALNLVKECGVE 271 (296)
Q Consensus 195 LRaGl~m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLATG~---Tl~aAi~~Lk~~Ga~ 271 (296)
..+...+++++.+.+ +.+.+.+...+=. .+| .|.++++++. |++|+|+-..-.-.. -+...++.|++.|+
T Consensus 5 ~~~~~~la~~ia~~l-~~~~~~~~~~~Fp-dGE---~~v~i~~~v~-g~~v~i~~~~~~~~d~l~ell~~~~alr~~ga- 77 (285)
T PRK00934 5 GSASQLLASEVARLL-NTELALVETKRFP-DGE---LYVRILGEID-GEDVVIISTTYPQDENLVELLLLIDALRDEGA- 77 (285)
T ss_pred CCCCHHHHHHHHHHH-CCceEeeEEEECC-CCC---EEEEECCCcC-CCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCC-
Confidence 456677888887754 6677777765521 233 2566678897 999999876432222 24456778889998
Q ss_pred CccEEEEE
Q 022490 272 NKQIKVIS 279 (296)
Q Consensus 272 ~k~I~v~~ 279 (296)
++|.++.
T Consensus 78 -~~i~~v~ 84 (285)
T PRK00934 78 -KSITLVI 84 (285)
T ss_pred -CeEEEEe
Confidence 6776655
No 102
>PF10662 PduV-EutP: Ethanolamine utilisation - propanediol utilisation; InterPro: IPR012381 Members of this family function in ethanolamine [] and propanediol [] degradation pathways. Both pathways require coenzyme B12 (adenosylcobalamin, AdoCbl). Bacteria that harbour these pathways can use ethanolamine as a source of carbon and nitrogen, or propanediol as a sole carbon and energy source, respectively. The exact roles of the EutP and PduV proteins in these respective pathways are not yet determined. Members of this family contain P-loop consensus motifs in the N-terminal part, and are distantly related to various GTPases and ATPases, including ATPase components of transport systems. Propanediol degradation is thought to be important for the natural Salmonella populations, since propanediol is produced by the fermentation of the common plant sugars rhamnose and fucose [, ]. More than 1% of the Salmonella enterica genome is devoted to the utilisation of propanediol and cobalamin biosynthesis. In vivo expression technology has indicated that propanediol utilisation (pdu) genes may be important for growth in host tissues, and competitive index studies with mice have shown that pdu mutations confer a virulence defect [, ]. The pdu operon is contiguous and co-regulated with the cobalamin (B12) biosynthesis cob operon, indicating that propanediol catabolism may be the primary reason for de novo B12 synthesis in Salmonella [, , ]. Please see IPR003207 from INTERPRO, IPR003208 from INTERPRO, IPR009204 from INTERPRO, IPR009191 from INTERPRO, IPR009192 from INTERPRO for more details on the propanediol utilisation pathway and the pdu operon.; GO: 0005524 ATP binding, 0006576 cellular biogenic amine metabolic process
Probab=36.96 E-value=58 Score=28.11 Aligned_cols=41 Identities=17% Similarity=0.295 Sum_probs=32.0
Q ss_pred CcccchHHHHHHHHHHHHcCCCCccEEEEEEeeChHHHHHHHHh
Q 022490 250 PMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSEN 293 (296)
Q Consensus 250 DmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas~~Gle~l~~~ 293 (296)
|...+...+..|.+.|+.+|+ ++| +.+-....+|++.|.+-
T Consensus 100 Dl~~~~~~i~~a~~~L~~aG~--~~i-f~vS~~~~eGi~eL~~~ 140 (143)
T PF10662_consen 100 DLPSDDANIERAKKWLKNAGV--KEI-FEVSAVTGEGIEELKDY 140 (143)
T ss_pred cCccchhhHHHHHHHHHHcCC--CCe-EEEECCCCcCHHHHHHH
Confidence 444466889999999999999 568 55556788999998763
No 103
>cd00158 RHOD Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.
Probab=36.67 E-value=72 Score=22.99 Aligned_cols=32 Identities=19% Similarity=0.229 Sum_probs=25.3
Q ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEE
Q 022490 241 EGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKV 277 (296)
Q Consensus 241 ~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v 277 (296)
+++.|+++++- |.....+...|++.|. .++.+
T Consensus 49 ~~~~vv~~c~~---~~~a~~~~~~l~~~G~--~~v~~ 80 (89)
T cd00158 49 KDKPIVVYCRS---GNRSARAAKLLRKAGG--TNVYN 80 (89)
T ss_pred CCCeEEEEeCC---CchHHHHHHHHHHhCc--ccEEE
Confidence 36888888876 7788889999999996 45643
No 104
>cd01529 4RHOD_Repeats Member of the Rhodanese Homology Domain superfamily. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. Only the second and most of the fourth repeats contain the putative catalytic Cys residue. This CD aligns the 1st , 2nd, 3rd, and 4th repeats.
Probab=36.34 E-value=71 Score=24.25 Aligned_cols=32 Identities=13% Similarity=0.022 Sum_probs=24.7
Q ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEE
Q 022490 241 EGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKV 277 (296)
Q Consensus 241 ~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v 277 (296)
+++.|+++++ +|.....++..|++.|. ++|.+
T Consensus 55 ~~~~ivv~c~---~g~~s~~~~~~l~~~G~--~~v~~ 86 (96)
T cd01529 55 RATRYVLTCD---GSLLARFAAQELLALGG--KPVAL 86 (96)
T ss_pred CCCCEEEEeC---ChHHHHHHHHHHHHcCC--CCEEE
Confidence 3678888875 77888888889999997 46644
No 105
>PRK01259 ribose-phosphate pyrophosphokinase; Provisional
Probab=35.66 E-value=3e+02 Score=26.39 Aligned_cols=78 Identities=15% Similarity=0.205 Sum_probs=49.4
Q ss_pred cCcchHHHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccc-h---HHHHHHHHHHHHcCC
Q 022490 195 LRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLAT-G---GTVVAALNLVKECGV 270 (296)
Q Consensus 195 LRaGl~m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLAT-G---~Tl~aAi~~Lk~~Ga 270 (296)
..+...+++++.+.+ +.+.+.+...+= ..+| .|.++++++. |++|+|+=.+-.. . --+...++.+++.|+
T Consensus 6 ~~~~~~la~~ia~~l-g~~~~~~~~~~F-pdGE---~~vri~~~v~-g~~V~ii~s~~~~~nd~l~eLll~~~alr~~ga 79 (309)
T PRK01259 6 GNANPELAEKIAKYL-GIPLGKASVGRF-SDGE---ISVEINENVR-GKDVFIIQSTCAPTNDNLMELLIMIDALKRASA 79 (309)
T ss_pred CCCCHHHHHHHHHHh-CCceeeeEEEEC-CCCC---EEEEeCCCCC-CCEEEEECCCCCCCcHHHHHHHHHHHHHHHcCC
Confidence 456667777777754 455665555431 1233 2567778897 9999999664221 1 124567788899998
Q ss_pred CCccEEEEEE
Q 022490 271 ENKQIKVISA 280 (296)
Q Consensus 271 ~~k~I~v~~l 280 (296)
++|.++.-
T Consensus 80 --~~i~lViP 87 (309)
T PRK01259 80 --GRITAVIP 87 (309)
T ss_pred --ceEEEEee
Confidence 67766653
No 106
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=34.08 E-value=93 Score=29.52 Aligned_cols=50 Identities=18% Similarity=0.228 Sum_probs=34.4
Q ss_pred CCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeC-hHHHHHHHHhc
Q 022490 238 KFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAA-PPALQKLSENF 294 (296)
Q Consensus 238 dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas-~~Gle~l~~~f 294 (296)
+++ +++|+| +.+||+..+++-.|.+.|+ ++|.++.-=.. .+..+++.+.+
T Consensus 121 ~~~-~k~vlv----lGaGGaarAi~~~l~~~g~--~~i~i~nRt~~~~~ka~~la~~~ 171 (288)
T PRK12749 121 DIK-GKTMVL----LGAGGASTAIGAQGAIEGL--KEIKLFNRRDEFFDKALAFAQRV 171 (288)
T ss_pred CcC-CCEEEE----ECCcHHHHHHHHHHHHCCC--CEEEEEeCCccHHHHHHHHHHHh
Confidence 465 788875 5689999888888999998 56766654211 34556665544
No 107
>cd01444 GlpE_ST GlpE sulfurtransferase (ST) and homologs are members of the Rhodanese Homology Domain superfamily. Unlike other rhodanese sulfurtransferases, GlpE is a single domain protein but indications are that it functions as a dimer. The active site contains a catalytically active cysteine.
Probab=33.32 E-value=61 Score=24.23 Aligned_cols=31 Identities=13% Similarity=0.269 Sum_probs=25.4
Q ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEE
Q 022490 241 EGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIK 276 (296)
Q Consensus 241 ~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~ 276 (296)
+++.|++++. +|.....+...|++.|. .+++
T Consensus 55 ~~~~ivv~c~---~g~~s~~a~~~l~~~G~--~~v~ 85 (96)
T cd01444 55 RDRPVVVYCY---HGNSSAQLAQALREAGF--TDVR 85 (96)
T ss_pred CCCCEEEEeC---CCChHHHHHHHHHHcCC--ceEE
Confidence 3678888887 88899999999999997 4554
No 108
>PF11181 YflT: Heat induced stress protein YflT
Probab=33.23 E-value=64 Score=25.71 Aligned_cols=38 Identities=16% Similarity=0.269 Sum_probs=28.6
Q ss_pred ccchHHHHHHHHHHHHcCCCCccEEEEEEeeChHHHHHHH
Q 022490 252 LATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLS 291 (296)
Q Consensus 252 LATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas~~Gle~l~ 291 (296)
..|...+..+++.|+..|....+|.+++- ..+..+.|.
T Consensus 6 ~~~~~E~~~~I~~L~~~Gy~~ddI~Vva~--d~~~~~~l~ 43 (103)
T PF11181_consen 6 YDNEEEALSAIEELKAQGYSEDDIYVVAK--DKDRTERLA 43 (103)
T ss_pred ECCHHHHHHHHHHHHHcCCCcccEEEEEc--CchHHHHHH
Confidence 46788999999999999998889976652 344444444
No 109
>COG0784 CheY FOG: CheY-like receiver [Signal transduction mechanisms]
Probab=31.04 E-value=2e+02 Score=22.04 Aligned_cols=44 Identities=30% Similarity=0.351 Sum_probs=26.6
Q ss_pred CCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCh-HHHHHHHHh
Q 022490 242 GSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAP-PALQKLSEN 293 (296)
Q Consensus 242 gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas~-~Gle~l~~~ 293 (296)
+.+|+++|| .........+.|...|. .+...-... ++++.+.+.
T Consensus 5 ~~~vLivdD---~~~~~~~~~~~l~~~g~-----~v~~a~~g~~~al~~~~~~ 49 (130)
T COG0784 5 GLRVLVVDD---EPVNRRLLKRLLEDLGY-----EVVEAADGEEEALELLREL 49 (130)
T ss_pred CcEEEEEcC---CHHHHHHHHHHHHHcCC-----eEEEeCChHHHHHHHHHhC
Confidence 679999999 33344445556677772 233333453 677777665
No 110
>PRK03092 ribose-phosphate pyrophosphokinase; Provisional
Probab=29.14 E-value=2.4e+02 Score=27.02 Aligned_cols=63 Identities=14% Similarity=0.185 Sum_probs=40.2
Q ss_pred CceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccc-hH---HHHHHHHHHHHcCCCCccEEEEEE
Q 022490 211 AIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLAT-GG---TVVAALNLVKECGVENKQIKVISA 280 (296)
Q Consensus 211 ~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLAT-G~---Tl~aAi~~Lk~~Ga~~k~I~v~~l 280 (296)
+.+.|.+...+= ..+| .|.++++++. |++|+|+-.+... .. -+...++.+++.|+ ++|.++.-
T Consensus 10 ~~~l~~~~~~~F-~DGE---~~vri~~~v~-g~~v~ii~s~~~p~nd~l~ell~~~~a~r~~~a--~~i~~ViP 76 (304)
T PRK03092 10 GVEVTPTTAYDF-ANGE---IYVRFEESVR-GCDAFVLQSHTAPINKWLMEQLIMIDALKRASA--KRITVVLP 76 (304)
T ss_pred CCceeeeEEEEC-CCCC---EEEEECCCCC-CCEEEEEeCCCCCCcHHHHHHHHHHHHHHHcCC--CeEEEEEe
Confidence 345555555331 1133 3567778997 9999998875532 22 24567788899998 67876663
No 111
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=27.74 E-value=2e+02 Score=26.75 Aligned_cols=48 Identities=23% Similarity=0.485 Sum_probs=34.0
Q ss_pred CCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeChHHHHHHHHhc
Q 022490 238 KFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENF 294 (296)
Q Consensus 238 dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas~~Gle~l~~~f 294 (296)
++. +++|+|+ .+|+...+++..|.+.|+ .+|.++.- +.+..+.+.+.+
T Consensus 120 ~~~-~k~vlVl----GaGg~a~ai~~aL~~~g~--~~V~v~~R--~~~~a~~l~~~~ 167 (278)
T PRK00258 120 DLK-GKRILIL----GAGGAARAVILPLLDLGV--AEITIVNR--TVERAEELAKLF 167 (278)
T ss_pred CCC-CCEEEEE----cCcHHHHHHHHHHHHcCC--CEEEEEeC--CHHHHHHHHHHh
Confidence 565 7898876 679999999999999996 45655542 345555555543
No 112
>PLN02369 ribose-phosphate pyrophosphokinase
Probab=27.33 E-value=3.2e+02 Score=26.17 Aligned_cols=72 Identities=17% Similarity=0.284 Sum_probs=42.9
Q ss_pred HHHHHHccCCCceeEEEEEeecCCCCcceeeecCCCCCCCCCCEEEEEcCcccc-h---HHHHHHHHHHHHcCCCCccEE
Q 022490 201 LVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLAT-G---GTVVAALNLVKECGVENKQIK 276 (296)
Q Consensus 201 m~~~l~k~lP~a~ig~I~i~rd~~t~e~~~~~~~LP~dI~~gk~VLLVDDmLAT-G---~Tl~aAi~~Lk~~Ga~~k~I~ 276 (296)
+++++.+.+ +.+.+.+...+= ..+|. |.+++.++. |++|+|+-.+... - --+...++.+++.|+ ++|.
T Consensus 3 lA~~ia~~l-g~~l~~~~~~~F-pdGE~---~v~i~~~v~-g~~V~iv~s~~~p~nd~l~eLl~~~~a~r~~~a--~~i~ 74 (302)
T PLN02369 3 LSQEIACYL-GLELGKITIKRF-ADGEI---YVQLQESVR-GCDVFLVQPTCPPANENLMELLIMIDACRRASA--KRIT 74 (302)
T ss_pred HHHHHHHHh-CCceeeeEEEEC-CCCCE---EEEECCCCC-CCeEEEEecCCCCcchHHHHHHHHHHHHHHcCC--CeEE
Confidence 344444433 345555555331 12332 456778897 9999999886522 1 124556788899998 6776
Q ss_pred EEEE
Q 022490 277 VISA 280 (296)
Q Consensus 277 v~~l 280 (296)
++.-
T Consensus 75 ~ViP 78 (302)
T PLN02369 75 AVIP 78 (302)
T ss_pred EEee
Confidence 6553
No 113
>PF09861 DUF2088: Domain of unknown function (DUF2088); InterPro: IPR018657 This domain, found in various hypothetical proteins, has no known function. ; PDB: 2YJG_B.
Probab=26.55 E-value=1.5e+02 Score=26.84 Aligned_cols=42 Identities=26% Similarity=0.351 Sum_probs=27.5
Q ss_pred CCEEEEEcCcccc---hHHHHHHHHHHHHcCCCCccEEEEEEeeC
Q 022490 242 GSRIFVVDPMLAT---GGTVVAALNLVKECGVENKQIKVISAVAA 283 (296)
Q Consensus 242 gk~VLLVDDmLAT---G~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas 283 (296)
.+-+|++||.--- +.-+..+++.|+++|++.++|.++....+
T Consensus 55 ~~V~Ivv~D~TRp~p~~~il~~ll~~L~~~Gv~~~~i~ii~A~G~ 99 (204)
T PF09861_consen 55 KRVAIVVDDITRPTPSDLILPALLEELEEAGVKDEDITIIIALGT 99 (204)
T ss_dssp SEEEEEEE-TTS---HHHHHHHHHHHHHT-T-TT-EEEEEEE-TT
T ss_pred CeEEEEeCCCCCCCCHHHHHHHHHHHHHhcCCCccCEEEEEeCCC
Confidence 4677788887543 45577888999999998889988887665
No 114
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=26.50 E-value=1.4e+02 Score=28.32 Aligned_cols=46 Identities=17% Similarity=0.228 Sum_probs=32.6
Q ss_pred CCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeChHHHHHHHH
Q 022490 238 KFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSE 292 (296)
Q Consensus 238 dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas~~Gle~l~~ 292 (296)
++. +++|+| +.+||+..+++-.|.+.|+ ++|.++.- ..+..+.|.+
T Consensus 124 ~~~-~k~vli----lGaGGaarAi~~aL~~~g~--~~i~i~nR--~~~ka~~La~ 169 (283)
T PRK14027 124 NAK-LDSVVQ----VGAGGVGNAVAYALVTHGV--QKLQVADL--DTSRAQALAD 169 (283)
T ss_pred CcC-CCeEEE----ECCcHHHHHHHHHHHHCCC--CEEEEEcC--CHHHHHHHHH
Confidence 354 788874 6799999999999999998 56766653 3344455544
No 115
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=26.29 E-value=1.4e+02 Score=28.48 Aligned_cols=50 Identities=24% Similarity=0.459 Sum_probs=36.0
Q ss_pred CCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeChHHHHHHHHhcC
Q 022490 237 EKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFH 295 (296)
Q Consensus 237 ~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas~~Gle~l~~~fP 295 (296)
.++. |++|+|+ ..||+..+++-.|++.|+ ++|.++.- +.+-.+++.+.|+
T Consensus 122 ~~~~-~~~vlil----GAGGAarAv~~aL~~~g~--~~i~V~NR--t~~ra~~La~~~~ 171 (283)
T COG0169 122 VDVT-GKRVLIL----GAGGAARAVAFALAEAGA--KRITVVNR--TRERAEELADLFG 171 (283)
T ss_pred cccC-CCEEEEE----CCcHHHHHHHHHHHHcCC--CEEEEEeC--CHHHHHHHHHHhh
Confidence 3554 8899875 799999999999999998 56766552 3444555555443
No 116
>PF12852 Cupin_6: Cupin
Probab=25.57 E-value=87 Score=26.97 Aligned_cols=43 Identities=33% Similarity=0.591 Sum_probs=37.1
Q ss_pred CCchhHHHHHhhhccC-CCChHHHHHHHHHHHHHHHHHHhccCC
Q 022490 122 PPHPLIKHWVSILRNE-QTPCPIFRNAMAELGRLLMYEASRDWL 164 (296)
Q Consensus 122 ~~~P~i~~llTiLRD~-~T~~~~Fr~~l~rL~rlL~eEAl~~~L 164 (296)
...+.+..++..|++. ..+.....-.++||+.+|+.++++.|+
T Consensus 142 ~~~~~L~~~l~~l~~E~~~~~~G~~~v~~rL~e~Llv~~LR~~l 185 (186)
T PF12852_consen 142 AAAPWLAALLALLRSESAQPRPGSDAVLDRLAELLLVEALRHWL 185 (186)
T ss_pred CCchhHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHh
Confidence 6789999999999886 456678999999999999999999764
No 117
>cd00606 fungal_RNase fungal type ribonuclease. Ribonucleases (RNAses) cleave phosphodiester bonds in RNA and are essential for both non-specific RNA degradation and for numerous forms of RNA processing. The members of this CD belong to the superfamily of microbial ribonucleases which are predominantly guanyl specific nucleases. Guanyl specific RNAses are endonucleases which split RNA phosphodiester bonds at the 3' oxygen end of guanosine residues to yield oligonucleotides with the guanosine-2',3'-cyclophosphate at the 3' end and the hydroxyl group at the 5' end. The terminal guanosine-2,3'-cyclophosphate is hydrolysed by guanyl RNAses to give guanosine-3'-phosphate. The alignment also contains ribotoxins, a fungal group of cytotoxins, specifically cleaving the sarcin/ricin loop (SRL) structure of the 23-28S rRNA and therefore being very potent inhibitors of protein synthesis.
Probab=24.58 E-value=36 Score=27.88 Aligned_cols=18 Identities=33% Similarity=0.658 Sum_probs=12.8
Q ss_pred CCCCccccc-cCCcccCCC
Q 022490 4 PWNEYPILS-HGNHISQTP 21 (296)
Q Consensus 4 ~~~~~~~~~-~~~~~~~~~ 21 (296)
||-||||++ ++--..+.|
T Consensus 51 ~~~EfPi~~~g~~Y~ggsP 69 (100)
T cd00606 51 PYYEFPIFSDGHVYTGGSP 69 (100)
T ss_pred ceEEEeEecCCCeecCCCC
Confidence 899999999 544444444
No 118
>PRK11524 putative methyltransferase; Provisional
Probab=24.08 E-value=52 Score=30.83 Aligned_cols=20 Identities=25% Similarity=0.137 Sum_probs=17.2
Q ss_pred EEEEcCcccchHHHHHHHHH
Q 022490 245 IFVVDPMLATGGTVVAALNL 264 (296)
Q Consensus 245 VLLVDDmLATG~Tl~aAi~~ 264 (296)
=+|+||...+|.|+.+|.++
T Consensus 210 D~VLDPF~GSGTT~~AA~~l 229 (284)
T PRK11524 210 DIVLDPFAGSFTTGAVAKAS 229 (284)
T ss_pred CEEEECCCCCcHHHHHHHHc
Confidence 35899999999999998764
No 119
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=23.19 E-value=1.7e+02 Score=29.35 Aligned_cols=50 Identities=18% Similarity=0.287 Sum_probs=36.4
Q ss_pred CCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeChHHHHHHHHhcC
Q 022490 237 EKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFH 295 (296)
Q Consensus 237 ~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~lIas~~Gle~l~~~fP 295 (296)
+++. |++|+| +.+|+....+++.|.+.|+ ++|.+++= +.+..+.+.++|+
T Consensus 177 ~~l~-~kkvlv----iGaG~~a~~va~~L~~~g~--~~I~V~nR--t~~ra~~La~~~~ 226 (414)
T PRK13940 177 DNIS-SKNVLI----IGAGQTGELLFRHVTALAP--KQIMLANR--TIEKAQKITSAFR 226 (414)
T ss_pred cCcc-CCEEEE----EcCcHHHHHHHHHHHHcCC--CEEEEECC--CHHHHHHHHHHhc
Confidence 4676 899985 5799999999999999998 45655442 3445566666553
No 120
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=21.41 E-value=1.7e+02 Score=28.85 Aligned_cols=36 Identities=11% Similarity=0.127 Sum_probs=30.2
Q ss_pred CCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEE
Q 022490 237 EKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVIS 279 (296)
Q Consensus 237 ~dI~~gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~v~~ 279 (296)
+++. +++|+|+ .+|.....+++.|.++|+ ++|.++.
T Consensus 170 ~~l~-~k~vLvI----GaGem~~l~a~~L~~~g~--~~i~v~n 205 (338)
T PRK00676 170 QKSK-KASLLFI----GYSEINRKVAYYLQRQGY--SRITFCS 205 (338)
T ss_pred CCcc-CCEEEEE----cccHHHHHHHHHHHHcCC--CEEEEEc
Confidence 5787 8999985 689999999999999998 5676654
No 121
>smart00002 PLP Myelin proteolipid protein (PLP or lipophilin).
Probab=21.21 E-value=35 Score=25.46 Aligned_cols=9 Identities=67% Similarity=1.545 Sum_probs=6.7
Q ss_pred CCCCCCccc
Q 022490 2 ILPWNEYPI 10 (296)
Q Consensus 2 ~~~~~~~~~ 10 (296)
|||||+.|-
T Consensus 31 ilpwna~pg 39 (60)
T smart00002 31 ILPWNAFPG 39 (60)
T ss_pred eeecCCCCC
Confidence 578988773
No 122
>PF14502 HTH_41: Helix-turn-helix domain
Probab=20.98 E-value=1.4e+02 Score=21.43 Aligned_cols=17 Identities=35% Similarity=0.620 Sum_probs=15.3
Q ss_pred chHHHHHHHHHHHHcCC
Q 022490 254 TGGTVVAALNLVKECGV 270 (296)
Q Consensus 254 TG~Tl~aAi~~Lk~~Ga 270 (296)
+=||+..|++.|++.||
T Consensus 19 s~GtiQ~Alk~Le~~ga 35 (48)
T PF14502_consen 19 SRGTIQNALKFLEENGA 35 (48)
T ss_pred chhHHHHHHHHHHHCCc
Confidence 34899999999999997
No 123
>cd01518 RHOD_YceA Member of the Rhodanese Homology Domain superfamily. This CD includes Escherichia coli YceA, Bacillus subtilis YbfQ, and similar uncharacterized proteins.
Probab=20.70 E-value=2e+02 Score=21.87 Aligned_cols=30 Identities=23% Similarity=0.317 Sum_probs=23.4
Q ss_pred CCEEEEEcCcccchHHHHHHHHHHHHcCCCCccEE
Q 022490 242 GSRIFVVDPMLATGGTVVAALNLVKECGVENKQIK 276 (296)
Q Consensus 242 gk~VLLVDDmLATG~Tl~aAi~~Lk~~Ga~~k~I~ 276 (296)
++.|++.+. +|..-..+...|++.|. ++++
T Consensus 61 ~~~ivvyC~---~G~rs~~a~~~L~~~G~--~~v~ 90 (101)
T cd01518 61 GKKVLMYCT---GGIRCEKASAYLKERGF--KNVY 90 (101)
T ss_pred CCEEEEECC---CchhHHHHHHHHHHhCC--ccee
Confidence 678888874 78777888889999997 4553
Done!