Query 022496
Match_columns 296
No_of_seqs 343 out of 2390
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 06:25:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022496.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022496hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwh_A Rhodanese-like domain p 99.9 2E-25 6.7E-30 167.6 9.3 98 186-291 2-99 (103)
2 4g2p_A Chaperone SURA; structu 99.9 6.8E-25 2.3E-29 166.4 9.7 97 84-181 3-109 (110)
3 3foj_A Uncharacterized protein 99.9 9.6E-25 3.3E-29 163.2 9.9 98 186-291 2-99 (100)
4 2lj4_A Peptidyl-prolyl CIS-tra 99.9 1.2E-24 4.2E-29 166.0 10.2 91 87-177 2-114 (115)
5 3gpk_A PPIC-type peptidyl-prol 99.9 1.3E-24 4.5E-29 164.8 9.3 95 87-182 5-106 (112)
6 3eme_A Rhodanese-like domain p 99.9 2.4E-24 8.1E-29 161.9 9.8 98 186-291 2-99 (103)
7 3i2v_A Adenylyltransferase and 99.9 4E-25 1.4E-29 172.1 5.1 107 187-296 2-127 (127)
8 1m5y_A SurviVal protein, survi 99.9 1.1E-24 3.8E-29 202.2 7.5 176 4-182 155-366 (408)
9 3gk5_A Uncharacterized rhodane 99.9 4.2E-24 1.4E-28 161.9 8.3 98 186-294 4-101 (108)
10 3i6c_A Peptidyl-prolyl CIS-tra 99.9 6.4E-24 2.2E-28 163.6 9.3 94 84-178 9-123 (123)
11 1jns_A Peptidyl-prolyl CIS-tra 99.9 6.4E-24 2.2E-28 156.1 8.5 89 88-179 2-91 (92)
12 2pv1_A Chaperone SURA; surviVa 99.9 1.9E-23 6.4E-28 156.9 9.0 90 89-179 2-102 (103)
13 3ui4_A Peptidyl-prolyl CIS-tra 99.9 1.9E-23 6.6E-28 155.9 8.9 89 87-179 5-100 (101)
14 1gmx_A GLPE protein; transfera 99.9 6.7E-24 2.3E-28 160.8 6.4 95 186-288 5-99 (108)
15 3hix_A ALR3790 protein; rhodan 99.9 4.5E-24 1.5E-28 161.2 5.1 98 192-294 2-99 (106)
16 1zk6_A Foldase protein PRSA; a 99.9 3.4E-23 1.2E-27 152.6 8.3 88 88-178 3-92 (93)
17 3tc5_A Peptidyl-prolyl CIS-tra 99.9 1.4E-22 4.7E-27 164.3 11.0 93 85-178 53-166 (166)
18 2kgj_A Peptidyl-prolyl CIS-tra 99.9 2.5E-23 8.4E-28 155.6 5.8 93 88-182 2-96 (102)
19 2rqs_A Parvulin-like peptidyl- 99.9 1.8E-22 6.1E-27 149.7 10.1 89 87-178 7-97 (97)
20 2jzv_A Foldase protein PRSA; p 99.9 1.7E-22 6E-27 153.6 10.2 93 84-177 2-110 (111)
21 1wv9_A Rhodanese homolog TT165 99.9 4.3E-23 1.5E-27 152.4 6.3 91 187-288 3-93 (94)
22 1qxn_A SUD, sulfide dehydrogen 99.9 8.4E-23 2.9E-27 161.3 8.1 102 185-291 22-126 (137)
23 1tq1_A AT5G66040, senescence-a 99.9 3E-23 1E-27 162.2 5.4 102 185-291 17-126 (129)
24 3d1p_A Putative thiosulfate su 99.9 2.4E-22 8.3E-27 159.0 10.4 107 186-294 23-138 (139)
25 2hhg_A Hypothetical protein RP 99.9 1.3E-22 4.3E-27 160.6 8.6 106 185-292 21-131 (139)
26 3ilm_A ALR3790 protein; rhodan 99.9 1.1E-22 3.7E-27 161.4 7.7 99 188-291 2-100 (141)
27 3flh_A Uncharacterized protein 99.9 8E-23 2.7E-27 158.7 5.0 102 186-294 15-119 (124)
28 3nhv_A BH2092 protein; alpha-b 99.9 1.5E-21 5.1E-26 155.4 10.5 100 186-291 16-117 (144)
29 1j6y_A Peptidyl-prolyl CIS-tra 99.8 4.8E-22 1.6E-26 156.8 4.8 92 85-177 22-138 (139)
30 2k0z_A Uncharacterized protein 99.8 4.7E-22 1.6E-26 151.1 4.1 85 204-291 15-99 (110)
31 2jtq_A Phage shock protein E; 99.8 2.9E-22 9.9E-27 145.1 2.7 80 206-288 2-81 (85)
32 1t3k_A Arath CDC25, dual-speci 99.8 7.5E-22 2.6E-26 158.6 3.6 102 186-291 28-138 (152)
33 3g5j_A Putative ATP/GTP bindin 99.8 7.8E-22 2.7E-26 154.7 3.6 97 186-290 5-132 (134)
34 3olh_A MST, 3-mercaptopyruvate 99.8 1.1E-20 3.7E-25 168.5 10.7 105 186-294 175-301 (302)
35 1yw5_A Peptidyl prolyl CIS/tra 99.8 1.1E-20 3.6E-25 155.4 9.4 91 86-177 64-176 (177)
36 4f67_A UPF0176 protein LPG2838 99.8 3.6E-21 1.2E-25 167.3 6.3 103 186-292 122-226 (265)
37 2fsx_A RV0390, COG0607: rhodan 99.8 1.4E-20 4.8E-25 150.5 4.4 98 186-286 5-119 (148)
38 1c25_A CDC25A; hydrolase, cell 99.8 6.9E-20 2.4E-24 148.4 5.9 107 185-291 22-144 (161)
39 1e0c_A Rhodanese, sulfurtransf 99.8 3.1E-19 1.1E-23 156.5 10.2 99 186-288 147-264 (271)
40 1vee_A Proline-rich protein fa 99.8 3.9E-20 1.3E-24 145.4 3.9 103 186-291 5-121 (134)
41 1urh_A 3-mercaptopyruvate sulf 99.8 3.5E-19 1.2E-23 157.0 8.9 98 186-288 152-271 (280)
42 1rhs_A Sulfur-substituted rhod 99.8 3.5E-19 1.2E-23 158.3 8.9 99 186-288 160-281 (296)
43 2vsw_A Dual specificity protei 99.8 2.7E-19 9.4E-24 143.7 6.8 101 186-288 4-127 (153)
44 3op3_A M-phase inducer phospha 99.8 3.7E-19 1.3E-23 150.4 7.9 105 185-289 56-177 (216)
45 2j6p_A SB(V)-AS(V) reductase; 99.8 1.3E-19 4.5E-24 145.5 4.3 107 186-293 5-121 (152)
46 3hzu_A Thiosulfate sulfurtrans 99.8 6.6E-19 2.3E-23 158.0 8.6 97 186-288 179-301 (318)
47 1qb0_A Protein (M-phase induce 99.8 2.8E-19 9.5E-24 151.3 5.7 106 185-291 43-166 (211)
48 2a2k_A M-phase inducer phospha 99.8 2.7E-19 9.4E-24 146.9 5.2 106 185-291 23-146 (175)
49 1e0c_A Rhodanese, sulfurtransf 99.8 1E-18 3.6E-23 153.2 9.0 101 187-291 10-126 (271)
50 3rfw_A Cell-binding factor 2; 99.8 1.5E-18 5E-23 150.8 8.8 108 86-198 109-224 (252)
51 1urh_A 3-mercaptopyruvate sulf 99.7 3.5E-18 1.2E-22 150.6 10.7 102 186-291 4-131 (280)
52 3utn_X Thiosulfate sulfurtrans 99.7 2.5E-18 8.4E-23 154.1 9.6 106 187-292 185-320 (327)
53 2eg4_A Probable thiosulfate su 99.7 3.2E-18 1.1E-22 146.6 9.6 92 187-289 122-225 (230)
54 2ouc_A Dual specificity protei 99.7 5E-19 1.7E-23 139.9 4.0 103 188-291 3-135 (142)
55 3tp9_A Beta-lactamase and rhod 99.7 3.2E-18 1.1E-22 161.7 10.2 98 186-291 374-471 (474)
56 3aay_A Putative thiosulfate su 99.7 5.2E-18 1.8E-22 149.2 10.4 94 188-287 146-267 (277)
57 3hzu_A Thiosulfate sulfurtrans 99.7 1.2E-18 4.2E-23 156.3 6.2 102 186-291 40-156 (318)
58 1uar_A Rhodanese; sulfurtransf 99.7 3.9E-18 1.3E-22 150.6 8.9 98 186-287 146-274 (285)
59 3tg1_B Dual specificity protei 99.7 1E-17 3.4E-22 135.3 10.3 104 185-289 10-143 (158)
60 3f4a_A Uncharacterized protein 99.7 1E-19 3.6E-24 148.5 -1.5 106 185-291 30-155 (169)
61 1rhs_A Sulfur-substituted rhod 99.7 1.9E-17 6.6E-22 147.0 10.9 106 186-291 8-139 (296)
62 1uar_A Rhodanese; sulfurtransf 99.7 2.2E-18 7.5E-23 152.2 4.4 102 186-291 8-124 (285)
63 1hzm_A Dual specificity protei 99.7 5.2E-18 1.8E-22 136.2 6.1 100 186-288 16-142 (154)
64 3aay_A Putative thiosulfate su 99.7 3.9E-18 1.3E-22 150.0 5.6 102 186-291 6-122 (277)
65 1yt8_A Thiosulfate sulfurtrans 99.7 7.1E-18 2.4E-22 161.7 7.1 102 186-292 7-108 (539)
66 3ics_A Coenzyme A-disulfide re 99.7 8.9E-18 3.1E-22 162.6 7.6 98 185-292 488-585 (588)
67 3nrk_A LIC12922; NC domain, pa 99.7 8.8E-18 3E-22 151.1 6.3 93 88-181 158-266 (325)
68 3olh_A MST, 3-mercaptopyruvate 99.7 1.1E-16 3.6E-21 142.6 11.5 106 186-291 22-154 (302)
69 1okg_A Possible 3-mercaptopyru 99.7 3.6E-17 1.2E-21 149.7 8.1 85 204-288 173-287 (373)
70 2wlr_A Putative thiosulfate su 99.7 5.8E-17 2E-21 150.9 9.2 103 187-289 125-245 (423)
71 3ntd_A FAD-dependent pyridine 99.7 3.2E-17 1.1E-21 157.8 7.3 80 204-288 485-564 (565)
72 2wlr_A Putative thiosulfate su 99.7 2.8E-17 9.7E-22 153.0 6.7 98 186-287 272-398 (423)
73 1yt8_A Thiosulfate sulfurtrans 99.7 4E-17 1.4E-21 156.4 7.3 98 186-291 377-474 (539)
74 1okg_A Possible 3-mercaptopyru 99.7 1E-16 3.4E-21 146.7 8.1 99 186-291 14-140 (373)
75 1m5y_A SurviVal protein, survi 99.6 3.9E-17 1.3E-21 151.3 3.9 113 65-181 131-255 (408)
76 3r2u_A Metallo-beta-lactamase 99.6 1E-17 3.6E-22 157.8 0.0 80 204-287 386-465 (466)
77 2eg4_A Probable thiosulfate su 99.6 2E-16 6.7E-21 135.4 4.6 80 204-287 5-98 (230)
78 1whb_A KIAA0055; deubiqutinati 99.6 6.2E-16 2.1E-20 124.6 6.0 101 186-288 15-141 (157)
79 2gwf_A Ubiquitin carboxyl-term 99.6 5.7E-16 2E-20 124.8 5.8 101 186-288 20-146 (157)
80 3tp9_A Beta-lactamase and rhod 99.5 3.4E-14 1.2E-18 134.1 5.1 96 185-290 272-368 (474)
81 3rgc_A Possible periplasmic pr 99.4 3.8E-14 1.3E-18 122.9 0.1 107 66-198 114-222 (252)
82 3utn_X Thiosulfate sulfurtrans 99.3 5.8E-12 2E-16 112.7 10.1 104 186-291 28-157 (327)
83 3r2u_A Metallo-beta-lactamase 99.2 5.1E-12 1.8E-16 118.9 6.2 79 204-286 295-375 (466)
84 2lj4_A Peptidyl-prolyl CIS-tra 99.2 2E-12 6.9E-17 98.2 -0.6 82 3-85 5-102 (115)
85 4g2p_A Chaperone SURA; structu 99.0 4.1E-11 1.4E-15 90.3 -1.1 84 2-85 8-93 (110)
86 3i6c_A Peptidyl-prolyl CIS-tra 98.9 6.9E-11 2.4E-15 90.6 -2.1 83 2-85 14-110 (123)
87 3gpk_A PPIC-type peptidyl-prol 98.9 6.9E-11 2.3E-15 89.2 -3.1 82 2-85 7-89 (112)
88 3tc5_A Peptidyl-prolyl CIS-tra 98.8 1.4E-10 4.8E-15 93.6 -3.0 83 2-85 57-153 (166)
89 1j6y_A Peptidyl-prolyl CIS-tra 98.7 4.9E-10 1.7E-14 87.9 -3.8 83 2-85 26-126 (139)
90 2pv1_A Chaperone SURA; surviVa 98.6 1.1E-09 3.8E-14 81.4 -2.8 82 2-85 2-88 (103)
91 2jzv_A Foldase protein PRSA; p 98.6 7.3E-10 2.5E-14 83.6 -4.0 84 2-85 7-98 (111)
92 1yw5_A Peptidyl prolyl CIS/tra 98.6 1.4E-09 4.9E-14 88.8 -3.4 83 2-85 67-164 (177)
93 1zk6_A Foldase protein PRSA; a 98.6 8.1E-09 2.8E-13 75.2 0.4 73 3-85 5-79 (93)
94 2kgj_A Peptidyl-prolyl CIS-tra 98.6 1.4E-09 4.7E-14 80.7 -4.0 76 2-85 3-79 (102)
95 2rqs_A Parvulin-like peptidyl- 98.6 8.3E-09 2.8E-13 75.8 0.1 74 3-85 10-84 (97)
96 1jns_A Peptidyl-prolyl CIS-tra 98.5 7.2E-09 2.4E-13 75.3 -1.5 73 3-85 4-77 (92)
97 3ui4_A Peptidyl-prolyl CIS-tra 98.4 2.9E-08 9.8E-13 73.4 -0.7 70 3-83 8-78 (101)
98 3nrk_A LIC12922; NC domain, pa 97.6 1.3E-06 4.5E-11 78.1 -4.8 90 4-95 161-261 (325)
99 3rfw_A Cell-binding factor 2; 97.6 3E-06 1E-10 72.8 -3.0 61 36-96 143-206 (252)
100 2f46_A Hypothetical protein; s 97.2 0.00021 7E-09 56.6 3.3 82 188-273 30-129 (156)
101 3rgc_A Possible periplasmic pr 90.0 0.3 1E-05 41.2 4.5 55 42-97 150-205 (252)
102 1v8c_A MOAD related protein; r 86.3 0.083 2.8E-06 42.1 -1.3 26 206-235 122-147 (168)
103 4erc_A Dual specificity protei 83.5 0.49 1.7E-05 36.1 2.0 68 206-273 37-117 (150)
104 2nt2_A Protein phosphatase sli 72.6 3.1 0.00011 31.4 3.6 28 246-273 80-110 (145)
105 2hcm_A Dual specificity protei 70.1 4.3 0.00015 31.3 4.0 28 246-273 88-118 (164)
106 2e0t_A Dual specificity phosph 69.6 4.5 0.00015 30.7 3.9 28 246-273 84-114 (151)
107 1wrm_A Dual specificity phosph 68.7 4.1 0.00014 31.6 3.6 29 245-273 81-112 (165)
108 2r0b_A Serine/threonine/tyrosi 68.6 4.3 0.00015 30.9 3.6 28 246-273 89-119 (154)
109 1zzw_A Dual specificity protei 67.9 5 0.00017 30.3 3.9 28 246-273 82-112 (149)
110 1xri_A AT1G05000; structural g 67.6 3.6 0.00012 31.2 3.0 28 246-273 91-120 (151)
111 1yz4_A DUSP15, dual specificit 67.6 4.8 0.00016 30.9 3.8 28 246-273 83-113 (160)
112 2esb_A Dual specificity protei 66.8 5.2 0.00018 31.8 3.9 28 246-273 96-126 (188)
113 3rgo_A Protein-tyrosine phosph 65.3 5.3 0.00018 30.3 3.6 28 246-273 88-118 (157)
114 2jgn_A DBX, DDX3, ATP-dependen 63.8 7.1 0.00024 30.8 4.2 39 245-284 44-82 (185)
115 2hjv_A ATP-dependent RNA helic 63.8 6.4 0.00022 30.2 3.8 38 246-284 34-71 (163)
116 1jzt_A Hypothetical 27.5 kDa p 63.2 5 0.00017 33.7 3.3 30 248-278 59-91 (246)
117 4h3k_B RNA polymerase II subun 63.0 7.7 0.00026 31.5 4.1 30 248-278 26-56 (214)
118 3d3k_A Enhancer of mRNA-decapp 62.9 5.1 0.00017 33.9 3.2 31 247-278 85-118 (259)
119 2hxp_A Dual specificity protei 62.2 6.6 0.00023 30.0 3.6 28 246-273 84-114 (155)
120 1t5i_A C_terminal domain of A 61.7 7.2 0.00025 30.3 3.8 38 246-284 30-67 (172)
121 3d3j_A Enhancer of mRNA-decapp 61.0 5.6 0.00019 34.6 3.2 31 247-278 132-165 (306)
122 2rb4_A ATP-dependent RNA helic 60.7 6.6 0.00023 30.5 3.4 37 246-283 33-69 (175)
123 2o8n_A APOA-I binding protein; 60.7 5.6 0.00019 33.8 3.1 31 247-278 79-112 (265)
124 2wgp_A Dual specificity protei 59.4 7.7 0.00026 30.9 3.6 28 246-273 102-132 (190)
125 3ezz_A Dual specificity protei 58.5 9 0.00031 28.6 3.7 28 246-273 80-110 (144)
126 1fuk_A Eukaryotic initiation f 57.9 9.6 0.00033 29.2 3.9 37 246-283 29-65 (165)
127 3s4e_A Dual specificity protei 57.6 9.1 0.00031 28.7 3.6 28 246-273 80-110 (144)
128 3nbm_A PTS system, lactose-spe 57.2 7.4 0.00025 28.2 2.9 32 245-277 4-39 (108)
129 2oud_A Dual specificity protei 57.1 8.8 0.0003 30.1 3.6 28 246-273 86-116 (177)
130 3emu_A Leucine rich repeat and 56.5 11 0.00037 29.0 4.0 29 245-273 85-116 (161)
131 2g6z_A Dual specificity protei 56.1 9.6 0.00033 31.1 3.7 28 246-273 82-112 (211)
132 3f81_A Dual specificity protei 55.6 9.7 0.00033 29.8 3.6 27 247-273 115-144 (183)
133 2y96_A Dual specificity phosph 55.1 11 0.00038 30.7 4.0 29 245-273 137-168 (219)
134 3rof_A Low molecular weight pr 54.0 9.3 0.00032 29.7 3.1 39 248-286 7-50 (158)
135 2pq5_A Dual specificity protei 53.8 12 0.0004 30.2 3.9 28 246-273 130-160 (205)
136 3ohg_A Uncharacterized protein 53.6 13 0.00046 31.8 4.3 26 257-282 218-243 (285)
137 1rxd_A Protein tyrosine phosph 53.4 14 0.00046 27.9 4.1 28 246-273 95-124 (159)
138 2j16_A SDP-1, tyrosine-protein 52.0 14 0.00049 29.2 4.1 29 245-273 115-146 (182)
139 3s4o_A Protein tyrosine phosph 51.7 15 0.00052 27.8 4.1 28 246-273 108-138 (167)
140 3cm3_A Late protein H1, dual s 51.1 13 0.00046 28.8 3.8 28 246-273 107-137 (176)
141 3to5_A CHEY homolog; alpha(5)b 50.6 27 0.00091 26.0 5.2 43 244-286 9-51 (134)
142 3eaq_A Heat resistant RNA depe 50.1 12 0.00042 30.1 3.5 37 246-283 30-66 (212)
143 3czc_A RMPB; alpha/beta sandwi 49.8 28 0.00096 24.9 5.0 27 247-273 18-49 (110)
144 1p8a_A Protein tyrosine phosph 48.7 2.3 7.7E-05 32.6 -1.2 39 248-286 5-44 (146)
145 1tvm_A PTS system, galactitol- 48.2 16 0.00056 26.4 3.5 28 246-273 20-52 (113)
146 1vkr_A Mannitol-specific PTS s 46.1 14 0.00047 27.4 2.9 27 246-272 12-43 (125)
147 2p6n_A ATP-dependent RNA helic 44.9 17 0.00057 28.8 3.4 36 247-283 54-89 (191)
148 3n8i_A Low molecular weight ph 44.3 14 0.00048 28.5 2.8 40 247-286 5-50 (157)
149 2l2q_A PTS system, cellobiose- 43.0 10 0.00036 27.2 1.7 28 246-273 3-34 (109)
150 2q05_A Late protein H1, dual s 42.5 23 0.00077 28.2 3.9 28 246-273 124-154 (195)
151 2img_A Dual specificity protei 41.6 23 0.00079 26.2 3.6 68 206-273 38-118 (151)
152 1e2b_A Enzyme IIB-cellobiose; 41.6 15 0.00052 26.3 2.4 26 248-273 4-33 (106)
153 1d1q_A Tyrosine phosphatase (E 40.8 17 0.00057 28.1 2.7 40 247-286 7-53 (161)
154 3rz2_A Protein tyrosine phosph 40.3 25 0.00084 27.7 3.7 29 245-273 115-145 (189)
155 2l17_A Synarsc, arsenate reduc 40.0 16 0.00055 27.3 2.4 35 249-283 6-41 (134)
156 1jl3_A Arsenate reductase; alp 39.9 23 0.00077 26.5 3.3 37 248-284 4-41 (139)
157 1yn9_A BVP, polynucleotide 5'- 38.8 27 0.00092 26.8 3.7 28 246-273 112-142 (169)
158 3rh0_A Arsenate reductase; oxi 37.9 26 0.00089 26.7 3.4 37 248-284 21-58 (148)
159 2yjt_D ATP-dependent RNA helic 43.4 7.1 0.00024 30.2 0.0 38 246-284 29-66 (170)
160 3rss_A Putative uncharacterize 37.1 16 0.00054 34.1 2.3 32 246-278 51-85 (502)
161 4etn_A LMPTP, low molecular we 36.7 11 0.00037 30.1 1.0 40 246-286 33-77 (184)
162 1oyw_A RECQ helicase, ATP-depe 35.7 27 0.00094 32.4 3.8 37 246-283 235-271 (523)
163 2v1x_A ATP-dependent DNA helic 35.5 27 0.00093 33.1 3.8 37 246-283 266-302 (591)
164 3fwz_A Inner membrane protein 35.3 41 0.0014 24.7 4.1 31 249-280 8-38 (140)
165 1jf8_A Arsenate reductase; ptp 35.0 30 0.001 25.6 3.3 37 248-284 4-41 (131)
166 3nme_A Ptpkis1 protein, SEX4 g 34.6 28 0.00096 29.8 3.4 28 246-273 105-135 (294)
167 1fpz_A Cyclin-dependent kinase 33.5 35 0.0012 27.3 3.7 28 246-273 132-163 (212)
168 1ywf_A Phosphotyrosine protein 33.1 35 0.0012 29.2 3.8 27 247-273 173-201 (296)
169 2i4i_A ATP-dependent RNA helic 33.0 35 0.0012 29.9 3.9 39 244-283 273-311 (417)
170 3i32_A Heat resistant RNA depe 32.9 28 0.00097 29.8 3.2 36 247-283 28-63 (300)
171 1xti_A Probable ATP-dependent 32.8 35 0.0012 29.6 3.8 37 246-283 249-285 (391)
172 2der_A TRNA-specific 2-thiouri 32.8 34 0.0012 30.5 3.7 28 246-273 16-43 (380)
173 2c46_A MRNA capping enzyme; ph 31.6 33 0.0011 28.4 3.3 28 246-273 140-170 (241)
174 1hv8_A Putative ATP-dependent 30.5 40 0.0014 28.7 3.8 38 245-283 236-273 (367)
175 2wmy_A WZB, putative acid phos 30.5 34 0.0012 26.0 2.9 36 248-284 9-45 (150)
176 1s2m_A Putative ATP-dependent 30.4 36 0.0012 29.7 3.5 37 246-283 257-293 (400)
177 3llv_A Exopolyphosphatase-rela 29.0 60 0.002 23.6 4.1 30 250-280 8-37 (141)
178 1ohe_A CDC14B, CDC14B2 phospha 28.6 44 0.0015 29.4 3.7 29 245-273 267-298 (348)
179 2wja_A Putative acid phosphata 27.1 41 0.0014 26.2 2.9 36 248-284 27-63 (168)
180 3pey_A ATP-dependent RNA helic 27.0 44 0.0015 28.8 3.5 37 246-283 242-278 (395)
181 3fht_A ATP-dependent RNA helic 26.8 43 0.0015 29.2 3.4 37 246-283 265-301 (412)
182 2j0s_A ATP-dependent RNA helic 26.6 44 0.0015 29.3 3.4 36 247-283 276-311 (410)
183 2fek_A Low molecular weight pr 25.9 47 0.0016 25.8 3.1 36 248-284 23-59 (167)
184 1i5e_A Uracil phosphoribosyltr 25.0 87 0.003 25.1 4.6 33 246-278 123-158 (209)
185 1vl2_A Argininosuccinate synth 24.9 70 0.0024 29.0 4.4 29 247-276 14-42 (421)
186 4fak_A Ribosomal RNA large sub 24.7 42 0.0015 26.1 2.5 45 241-285 68-117 (163)
187 1vdm_A Purine phosphoribosyltr 24.2 62 0.0021 24.2 3.4 32 246-277 82-116 (153)
188 1wp9_A ATP-dependent RNA helic 23.9 69 0.0024 28.2 4.3 35 245-280 359-393 (494)
189 1wy5_A TILS, hypothetical UPF0 23.6 92 0.0032 26.6 4.8 39 244-282 21-65 (317)
190 2g1u_A Hypothetical protein TM 23.3 1E+02 0.0036 22.8 4.6 30 250-280 21-50 (155)
191 4a29_A Engineered retro-aldol 23.1 30 0.001 29.1 1.4 68 206-275 155-230 (258)
192 1fpr_A Protein-tyrosine phosph 22.5 53 0.0018 27.7 3.0 18 245-262 202-220 (284)
193 1vch_A Phosphoribosyltransfera 22.3 79 0.0027 24.2 3.8 32 246-277 119-153 (175)
194 3t38_A Arsenate reductase; low 22.2 53 0.0018 26.7 2.8 37 246-282 80-117 (213)
195 2geb_A Hypoxanthine-guanine ph 22.0 82 0.0028 24.5 3.9 32 246-277 97-131 (185)
196 4etm_A LMPTP, low molecular we 21.9 62 0.0021 25.2 3.0 39 248-286 19-63 (173)
197 3sqn_A Conserved domain protei 21.6 49 0.0017 30.5 2.7 26 245-270 396-422 (485)
198 3eiq_A Eukaryotic initiation f 21.6 47 0.0016 29.0 2.6 38 246-284 279-316 (414)
199 3gh1_A Predicted nucleotide-bi 21.6 83 0.0028 28.7 4.1 29 245-273 144-179 (462)
200 1zn8_A APRT, adenine phosphori 21.6 83 0.0028 24.3 3.8 32 245-276 118-152 (180)
201 4grz_A Tyrosine-protein phosph 21.3 64 0.0022 27.2 3.3 18 245-262 204-222 (288)
202 2kxh_B Peptide of FAR upstream 21.3 6.5 0.00022 21.3 -1.9 11 3-13 15-25 (31)
203 1dku_A Protein (phosphoribosyl 21.1 1E+02 0.0035 26.5 4.6 34 246-279 216-252 (317)
204 1c4o_A DNA nucleotide excision 21.1 68 0.0023 30.8 3.7 36 246-282 438-473 (664)
205 1to0_A Hypothetical UPF0247 pr 21.0 66 0.0023 25.1 3.0 44 243-286 66-114 (167)
206 2dy0_A APRT, adenine phosphori 20.8 98 0.0034 24.2 4.1 32 245-276 124-158 (190)
207 2c5s_A THII, probable thiamine 20.8 73 0.0025 28.6 3.7 28 246-273 186-213 (413)
208 1lss_A TRK system potassium up 20.7 1E+02 0.0034 21.9 3.9 29 251-280 7-35 (140)
209 2d7d_A Uvrabc system protein B 20.3 76 0.0026 30.4 3.9 37 245-282 443-479 (661)
210 1p15_A Protein-tyrosine phosph 20.2 65 0.0022 26.6 3.0 18 245-262 174-192 (253)
No 1
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=99.92 E-value=2e-25 Score=167.57 Aligned_cols=98 Identities=32% Similarity=0.592 Sum_probs=86.4
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecCChHHHHhhCCCCceecccccccCCCCCccCCCCCCCcEEEEeCCChhHHHHHH
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQ 265 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~iv~~C~~G~rs~~aa~ 265 (296)
+.++++++++++.++ ++..+||||++.||..||||||+|||+.+|.... ..++++++||+||.+|.||..++.
T Consensus 2 k~Is~~el~~~l~~~---~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~----~~l~~~~~ivv~C~~G~rS~~aa~ 74 (103)
T 3iwh_A 2 KSITTDELKNKLLES---KPVQIVDVRTDEETAMGYIPNAKLIPMDTIPDNL----NSFNKNEIYYIVCAGGVRSAKVVE 74 (103)
T ss_dssp CEECHHHHHHGGGSS---SCCEEEECSCHHHHTTCBCTTCEECCGGGGGGCG----GGCCTTSEEEEECSSSSHHHHHHH
T ss_pred CCcCHHHHHHHHhCC---CCeEEEECCChhHHhcCccCCcccCcccchhhhh----hhhcCCCeEEEECCCCHHHHHHHH
Confidence 458899999988775 5789999999999999999999999999987653 456899999999999999999999
Q ss_pred HHHHcCCCceEEccchHHHhhhccCC
Q 022496 266 WLQTQGFRRVFNVSGGIHAYATKVDP 291 (296)
Q Consensus 266 ~L~~~G~~~v~~l~GG~~~W~~~~~~ 291 (296)
.|+++||+++ +|.||+.+|..+..|
T Consensus 75 ~L~~~G~~~~-~l~GG~~~W~~~g~p 99 (103)
T 3iwh_A 75 YLEANGIDAV-NVEGGMHAWGDEGLE 99 (103)
T ss_dssp HHHTTTCEEE-EETTHHHHHCSSSCB
T ss_pred HHHHcCCCEE-EecChHHHHHHCCCc
Confidence 9999999654 799999999976544
No 2
>4g2p_A Chaperone SURA; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, pcsep; 1.82A {Salmonella enterica subsp}
Probab=99.92 E-value=6.8e-25 Score=166.39 Aligned_cols=97 Identities=26% Similarity=0.478 Sum_probs=88.5
Q ss_pred CCCCceEEEeeEeeccc-------hHHHHHHHHHHHhcCCc-cHHHHHHhhCCCC-cccCCcccccccCCCCcHHHHHHH
Q 022496 84 GGGDREILVQHLLVKED-------DLNLLSELQRRVSQGRE-DLSDLAVEHSICP-SKGEGGMLGWVRKGQLVPEFEEVA 154 (296)
Q Consensus 84 ~~~~~~~~~~~Il~~~~-------~~~~a~~i~~~l~~~g~-~F~~la~~~S~d~-~~~~gG~lg~~~~~~l~~~~~~~~ 154 (296)
....++++++|||++.+ ++++|++|+++|+ +|. +|++||++||+|+ ++.+||+|||+..++|+|+|.+++
T Consensus 3 ~~~~~~v~~~hIli~~~~~~~~~~a~~~a~~i~~~l~-~G~~~F~~lA~~~S~d~~s~~~GG~lG~~~~~~l~~~f~~a~ 81 (110)
T 4g2p_A 3 AISVTEVHARHILLKPSPIMNDQQARLKLEEIAADIK-SGKTTFAAAAKEYSQDPGSANQGGDLGWATPDIFDPAFRDAL 81 (110)
T ss_dssp CCCCEEEEEEEEEECCCSSSCHHHHHHHHHHHHHHHH-TTSSCHHHHHHHHCCCTTTGGGTTEEEEECGGGSCHHHHHHH
T ss_pred CccccEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHH-cCcccHHHHHHHhCCCccccccccccCeecccccCHHHHHHH
Confidence 34458999999999853 4778999999996 887 9999999999998 999999999999999999999999
Q ss_pred hcCCCCcee-ceeecCcceEEEeehhhh
Q 022496 155 FTTPLNKVA-RCKTKFGWHLLQVLSERE 181 (296)
Q Consensus 155 ~~l~~G~vs-pv~~~~G~~Ii~v~~~~~ 181 (296)
|.|++|++| ||+|++||||+++.+++.
T Consensus 82 ~~l~~Geis~pv~t~~G~hIikv~~~r~ 109 (110)
T 4g2p_A 82 TKLHKGQISAPVHSSFGWHLIELLDTRK 109 (110)
T ss_dssp HTCCTTCBCCCEEETTEEEEEEEEEEEE
T ss_pred HcCCCCCcCccEEECCEEEEEEEEEEec
Confidence 999999999 899999999999998753
No 3
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=99.91 E-value=9.6e-25 Score=163.15 Aligned_cols=98 Identities=29% Similarity=0.555 Sum_probs=86.6
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecCChHHHHhhCCCCceecccccccCCCCCccCCCCCCCcEEEEeCCChhHHHHHH
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQ 265 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~iv~~C~~G~rs~~aa~ 265 (296)
..++++++.+++.+. ++..+||||++.||..||||||+|+|+..+... ...++++++||+||.+|.||..++.
T Consensus 2 ~~is~~el~~~l~~~---~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~----~~~l~~~~~ivvyC~~g~rs~~a~~ 74 (100)
T 3foj_A 2 ESITVTELKEKILDA---NPVNIVDVRTDQETAMGIIPGAETIPMNSIPDN----LNYFNDNETYYIICKAGGRSAQVVQ 74 (100)
T ss_dssp CEECHHHHHHGGGSS---SCCEEEECSCHHHHTTCBCTTCEECCGGGGGGC----GGGSCTTSEEEEECSSSHHHHHHHH
T ss_pred CccCHHHHHHHHhcC---CCcEEEECCCHHHHhcCcCCCCEECCHHHHHHH----HHhCCCCCcEEEEcCCCchHHHHHH
Confidence 357889999988543 478999999999999999999999999998764 3446899999999999999999999
Q ss_pred HHHHcCCCceEEccchHHHhhhccCC
Q 022496 266 WLQTQGFRRVFNVSGGIHAYATKVDP 291 (296)
Q Consensus 266 ~L~~~G~~~v~~l~GG~~~W~~~~~~ 291 (296)
.|+.+|| ||++|+||+.+|..+..|
T Consensus 75 ~L~~~G~-~v~~l~GG~~~W~~~g~p 99 (100)
T 3foj_A 75 YLEQNGV-NAVNVEGGMDEFGDEGLE 99 (100)
T ss_dssp HHHTTTC-EEEEETTHHHHHCSSSCB
T ss_pred HHHHCCC-CEEEecccHHHHHHcCCC
Confidence 9999999 999999999999976543
No 4
>2lj4_A Peptidyl-prolyl CIS-trans isomerase/rotamase, PUT; tbpin1; NMR {Trypanosoma brucei}
Probab=99.91 E-value=1.2e-24 Score=165.97 Aligned_cols=91 Identities=25% Similarity=0.481 Sum_probs=82.6
Q ss_pred CceEEEeeEeeccc---------------------hHHHHHHHHHHHhcCCccHHHHHHhhCCCCcccCCcccccccCCC
Q 022496 87 DREILVQHLLVKED---------------------DLNLLSELQRRVSQGREDLSDLAVEHSICPSKGEGGMLGWVRKGQ 145 (296)
Q Consensus 87 ~~~~~~~~Il~~~~---------------------~~~~a~~i~~~l~~~g~~F~~la~~~S~d~~~~~gG~lg~~~~~~ 145 (296)
+++++++|||++.+ +.+++++|+++|++++.+|+++|++||+++++.+||+|||+..++
T Consensus 2 pe~vrasHILi~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~~i~~g~~~F~~lA~~~Sd~~sa~~GGdLG~~~~~~ 81 (115)
T 2lj4_A 2 SEKLRAAHLLVKFSGSRNPVSRRTGDSTADVTYEDAIKELQKWSQRIASGEVSFEEAASQRSDCGSYASGGDLGFFSSGE 81 (115)
T ss_dssp CCEEEEEEEEECCTTSSCCCCTTTSSCCTTSCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHCCSGGGGTTSEEEEEETTS
T ss_pred CCcEEEEEEEEecCCccChhhhhhccccccccHHHHHHHHHHHHHHHHcCchhHHHHHHHhCCCcccccCCccceecCCC
Confidence 47899999999622 467899999999744469999999999888999999999999999
Q ss_pred CcHHHHHHHhcCCCCcee-ceeecCcceEEEee
Q 022496 146 LVPEFEEVAFTTPLNKVA-RCKTKFGWHLLQVL 177 (296)
Q Consensus 146 l~~~~~~~~~~l~~G~vs-pv~~~~G~~Ii~v~ 177 (296)
|+|+|.+++|.|++|++| ||+|++|||||+++
T Consensus 82 ~~~~f~~a~~~l~~GeiS~pv~t~~G~HIIkl~ 114 (115)
T 2lj4_A 82 MMKPFEDAVRALKIGDISPIVQTDSGLHIIKRL 114 (115)
T ss_dssp SCHHHHHHHTTSCBTCBCCCEECSSSEEEEEEC
T ss_pred CCchHHHHHhcCCCCCCCCcEEeCCeEEEEEEe
Confidence 999999999999999999 89999999999985
No 5
>3gpk_A PPIC-type peptidyl-prolyl CIS-trans isomerase; rotamase,ppiase domain, 11189O3,PSI2., structural genomics; 1.55A {Novosphingobium aromaticivorans}
Probab=99.91 E-value=1.3e-24 Score=164.79 Aligned_cols=95 Identities=19% Similarity=0.323 Sum_probs=88.1
Q ss_pred CceEEEeeEeeccc------hHHHHHHHHHHHhcCCccHHHHHHhhCCCCcccCCcccccccCCCCcHHHHHHHhcCCCC
Q 022496 87 DREILVQHLLVKED------DLNLLSELQRRVSQGREDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVAFTTPLN 160 (296)
Q Consensus 87 ~~~~~~~~Il~~~~------~~~~a~~i~~~l~~~g~~F~~la~~~S~d~~~~~gG~lg~~~~~~l~~~~~~~~~~l~~G 160 (296)
+++++++|||+++. ++++|++++++|+ +|++|++||++||+|+++.+||+|||++.++++|+|.+++|+|++|
T Consensus 5 ~~~~~v~hIli~~~~~~~~~a~~~A~~i~~~l~-~G~~F~~lA~~~S~d~sa~~GGdlG~~~~~~l~~~f~~a~~~l~~G 83 (112)
T 3gpk_A 5 TEEYRIGEIFLAATEENKPQVFANAEKIVEQLK-QGGSFVAYARQYSEASTAAVGGDLGWIRLAQLPTELATTAASMGPG 83 (112)
T ss_dssp CCEEEEEEEEEECCGGGHHHHHHHHHHHHHHHH-TTCCHHHHHHHHCCSTTGGGTTEEEEECGGGSCHHHHHHHHHCCTT
T ss_pred CcEEEEEEEEEeCChhhHHHHHHHHHHHHHHHH-CCCCHHHHHHHhCCCcchhcCcccceEcccccCHHHHHHHHhCCCC
Confidence 48899999999854 3578999999996 8999999999999999999999999999999999999999999999
Q ss_pred cee-ceeecCcceEEEeehhhhh
Q 022496 161 KVA-RCKTKFGWHLLQVLSEREA 182 (296)
Q Consensus 161 ~vs-pv~~~~G~~Ii~v~~~~~~ 182 (296)
++| ||+|++|||||++.+++..
T Consensus 84 eiS~pv~t~~G~hIikv~~~~~~ 106 (112)
T 3gpk_A 84 QLAGPVEIRGGFSILYLIDKREG 106 (112)
T ss_dssp CEEEEEEETTEEEEEEEEEEECC
T ss_pred CccceEEECCEEEEEEEEeEecc
Confidence 999 8999999999999987653
No 6
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=99.91 E-value=2.4e-24 Score=161.87 Aligned_cols=98 Identities=31% Similarity=0.584 Sum_probs=86.5
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecCChHHHHhhCCCCceecccccccCCCCCccCCCCCCCcEEEEeCCChhHHHHHH
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQ 265 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~iv~~C~~G~rs~~aa~ 265 (296)
..++++++.+.+.+. ++..+||||++.||..||||||+|+|+..|.... ..++++++||+||.+|.||..++.
T Consensus 2 ~~is~~el~~~l~~~---~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~----~~l~~~~~iv~yC~~g~rs~~a~~ 74 (103)
T 3eme_A 2 KSITTDELKNKLLES---KPVQIVDVRTDEETAMGYIPNAKLIPMDTIPDNL----NSFNKNEIYYIVCAGGVRSAKVVE 74 (103)
T ss_dssp CEECHHHHHHGGGSS---SCCEEEECSCHHHHTTCBCTTCEECCGGGGGGCG----GGCCTTSEEEEECSSSSHHHHHHH
T ss_pred CccCHHHHHHHHhcC---CCCEEEECCCHHHHhcCcCCCCEEcCHHHHHHHH----HhCCCCCeEEEECCCChHHHHHHH
Confidence 357888999988543 4789999999999999999999999999987653 446889999999999999999999
Q ss_pred HHHHcCCCceEEccchHHHhhhccCC
Q 022496 266 WLQTQGFRRVFNVSGGIHAYATKVDP 291 (296)
Q Consensus 266 ~L~~~G~~~v~~l~GG~~~W~~~~~~ 291 (296)
.|+.+|| +|++|+||+.+|..+..|
T Consensus 75 ~L~~~G~-~v~~l~GG~~~W~~~g~p 99 (103)
T 3eme_A 75 YLEANGI-DAVNVEGGMHAWGDEGLE 99 (103)
T ss_dssp HHHTTTC-EEEEETTHHHHHCSSSCB
T ss_pred HHHHCCC-CeEEeCCCHHHHHHCCCc
Confidence 9999999 999999999999876554
No 7
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=99.91 E-value=4e-25 Score=172.13 Aligned_cols=107 Identities=25% Similarity=0.404 Sum_probs=90.4
Q ss_pred CCCHHHHHHHhcCCCCCCCcEEEecCChHHHHhhCCCCceecccccccCCCCCccC-------------CCCCCCcEEEE
Q 022496 187 DIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITV-------------KFDPQKDTYVM 253 (296)
Q Consensus 187 ~is~~ev~~~L~~~~~~~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~-------------~~~~~~~iv~~ 253 (296)
.++.+++.+++.++ ++..+||||++.||..||||||+|||+..+......+.. ..+++++||+|
T Consensus 2 ~is~~el~~~l~~~---~~~~liDvR~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ivv~ 78 (127)
T 3i2v_A 2 RVSVTDYKRLLDSG---AFHLLLDVRPQVEVDICRLPHALHIPLKHLERRDAESLKLLKEAIWEEKQGTQEGAAVPIYVI 78 (127)
T ss_dssp EECHHHHHHHHHHT---CCCEEEECSCHHHHHHCCCTTSEECCHHHHHTTCHHHHHHHHHHHHHHHTTC---CCEEEEEE
T ss_pred CCCHHHHHHHHhCC---CCeEEEECCCHHHhhheecCCceeCChHHHhhhhhhhHHHHHHHHhhhcccccCCCCCeEEEE
Confidence 47788898888764 358999999999999999999999999988765433211 12345599999
Q ss_pred eCCChhHHHHHHHHHHc------CCCceEEccchHHHhhhccCCCCCCC
Q 022496 254 CHHGMRSLQVAQWLQTQ------GFRRVFNVSGGIHAYATKVDPSIPTY 296 (296)
Q Consensus 254 C~~G~rs~~aa~~L~~~------G~~~v~~l~GG~~~W~~~~~~~~~~~ 296 (296)
|.+|.||..++.+|+.+ ||.||++|+|||.+|..+.+|++|.|
T Consensus 79 C~~G~rs~~a~~~L~~~gg~~~~G~~~v~~l~GG~~~W~~~~~~~~p~y 127 (127)
T 3i2v_A 79 CKLGNDSQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAKIDGTFPQY 127 (127)
T ss_dssp CSSSSHHHHHHHHHHHHHHTTSSSCEEEEEETTHHHHHHHHTCTTSCCC
T ss_pred cCCCCcHHHHHHHHHHhhccccCCCceEEEecCCHHHHHHhcCCCCCCC
Confidence 99999999999999999 69999999999999999999999998
No 8
>1m5y_A SurviVal protein, surviVal protein SURA; surviVal protein A, periplasmic molecular chaperone, membrane protein folding, GRAM negative bacteria; 3.00A {Escherichia coli} SCOP: a.223.1.2 d.26.1.1 d.26.1.1 PDB: 2pv3_A
Probab=99.90 E-value=1.1e-24 Score=202.17 Aligned_cols=176 Identities=17% Similarity=0.217 Sum_probs=146.8
Q ss_pred ccccCCchh----hhhccccccccccccCCccccccCCchhH-HhhhhccCCCCCCCceeeeecccccCchhhcccccCC
Q 022496 4 RASQLASPV----LCAITQSLIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGT 78 (296)
Q Consensus 4 ~~~~~~~~~----~~~~~~~~~~~~~~~r~~~~~~~~~f~~l-~~~s~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~ 78 (296)
+.+||+-+. +++.........++++..+..| ..|+.+ ++||.++ ++..||++||+..+.+.++|+.+.|.+++
T Consensus 155 ~~~~i~i~~~~~~s~~~~~~~~~~a~~~~~~l~~g-~~F~~lA~~~S~~~-~~~~gG~lg~~~~~~l~~~~~~~~~~l~~ 232 (408)
T 1m5y_A 155 NLSHILIPLPENPTSDQVNEAESQARAIVDQARNG-ADFGKLAIAHSADQ-QALNGGQMGWGRIQELPGIFAQALSTAKK 232 (408)
T ss_dssp EEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHCCST-TGGGTTEEEEECGGGSCHHHHTGGGTCCT
T ss_pred EEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHcCCCc-ccccCCcccccchhhccHHHHHHHHhCCC
Confidence 455554332 3333333444455556655666 589999 9999997 78999999999999999999999999999
Q ss_pred CCCCCC---------------------CCCceEEEeeEeeccc-------hHHHHHHHHHHHhcCCc-cHHHHHHhhCCC
Q 022496 79 EGSSPG---------------------GGDREILVQHLLVKED-------DLNLLSELQRRVSQGRE-DLSDLAVEHSIC 129 (296)
Q Consensus 79 ~~i~~~---------------------~~~~~~~~~~Il~~~~-------~~~~a~~i~~~l~~~g~-~F~~la~~~S~d 129 (296)
|+|++| ...++++++|||+++. +++++++++++|+ +|. +|+++|++||.|
T Consensus 233 G~vs~pv~~~~g~~iikv~~~~~~~~~~~~~~~~~~~Il~~~~~~~~~~~a~~~a~~~~~~l~-~g~~~f~~~A~~~s~~ 311 (408)
T 1m5y_A 233 GDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVKLEQIAADIK-SGKTTFAAAAKEFSQD 311 (408)
T ss_dssp TCEEEEEEETTEEEEEEEEEECCCCCCCCCEEEEEEEEEECCCSSSCHHHHHHHHHHHHHHHH-TTSSCHHHHHHHHCCC
T ss_pred CCccCeeecCCeEEEEEEEEecCCCCcccccchhhheeeecCCCCcCHHHHHHHHHHHHHHHH-cCcccHHHHHHHhCCC
Confidence 998865 2246799999999853 4677999999996 887 999999999999
Q ss_pred C-cccCCcccccccCCCCcHHHHHHHhcCCCCcee-ceeecCcceEEEeehhhhh
Q 022496 130 P-SKGEGGMLGWVRKGQLVPEFEEVAFTTPLNKVA-RCKTKFGWHLLQVLSEREA 182 (296)
Q Consensus 130 ~-~~~~gG~lg~~~~~~l~~~~~~~~~~l~~G~vs-pv~~~~G~~Ii~v~~~~~~ 182 (296)
+ ++.+||++||++.+.++|+|.+++|.|++|++| ||++.+||||+++.++.+.
T Consensus 312 ~~s~~~gg~lg~~~~~~~~~~~~~a~f~l~~G~~s~~v~~~~g~~ii~v~~~~~~ 366 (408)
T 1m5y_A 312 PGSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNV 366 (408)
T ss_dssp TTTGGGTTEEEEECGGGSCHHHHHHHHTCCTTCBCCCEECSSCEEEEEEEEEEEC
T ss_pred cchhhcCCcCcccCcccchHHHHHHHHcCCCCCccCcEeeCCeEEEEEEeeecCC
Confidence 6 889999999999999999999999999999999 8999999999999987764
No 9
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=99.90 E-value=4.2e-24 Score=161.95 Aligned_cols=98 Identities=24% Similarity=0.470 Sum_probs=87.1
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecCChHHHHhhCCCCceecccccccCCCCCccCCCCCCCcEEEEeCCChhHHHHHH
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQ 265 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~iv~~C~~G~rs~~aa~ 265 (296)
..++.+++.+++.+ ..+||||++.||..||||||+|+|+..|.... ..++++++||+||.+|.||..++.
T Consensus 4 ~~is~~el~~~l~~------~~iiDvR~~~e~~~ghIpgA~~ip~~~l~~~~----~~l~~~~~ivvyC~~G~rs~~aa~ 73 (108)
T 3gk5_A 4 RSINAADLYENIKA------YTVLDVREPFELIFGSIANSINIPISELREKW----KILERDKKYAVICAHGNRSAAAVE 73 (108)
T ss_dssp CEECHHHHHHTTTT------CEEEECSCHHHHTTCBCTTCEECCHHHHHHHG----GGSCTTSCEEEECSSSHHHHHHHH
T ss_pred cEeCHHHHHHHHcC------CEEEECCCHHHHhcCcCCCCEEcCHHHHHHHH----HhCCCCCeEEEEcCCCcHHHHHHH
Confidence 55888888888753 78999999999999999999999999987643 346889999999999999999999
Q ss_pred HHHHcCCCceEEccchHHHhhhccCCCCC
Q 022496 266 WLQTQGFRRVFNVSGGIHAYATKVDPSIP 294 (296)
Q Consensus 266 ~L~~~G~~~v~~l~GG~~~W~~~~~~~~~ 294 (296)
.|+.+|| ||++|+|||.+|..+..|..+
T Consensus 74 ~L~~~G~-~v~~l~GG~~~W~~~~~~~~~ 101 (108)
T 3gk5_A 74 FLSQLGL-NIVDVEGGIQSWIEEGYPVVL 101 (108)
T ss_dssp HHHTTTC-CEEEETTHHHHHHHTTCCCBC
T ss_pred HHHHcCC-CEEEEcCcHHHHHHcCCCCCC
Confidence 9999999 999999999999998877543
No 10
>3i6c_A Peptidyl-prolyl CIS-trans isomerase NIMA- interacting 1; SBDD, small molecule, ppiase, cell cycle, nucleus, phosphoprotein, rotamase; HET: GIA; 1.30A {Homo sapiens} PDB: 3ik8_A 3ikd_A* 3ikg_A* 3jyj_A* 3kac_A* 1nmw_A
Probab=99.90 E-value=6.4e-24 Score=163.61 Aligned_cols=94 Identities=28% Similarity=0.449 Sum_probs=82.8
Q ss_pred CCCCceEEEeeEeecc-------------------chHHHHHHHHHHHhcCC-ccHHHHHHhhCCCCcccCCcccccccC
Q 022496 84 GGGDREILVQHLLVKE-------------------DDLNLLSELQRRVSQGR-EDLSDLAVEHSICPSKGEGGMLGWVRK 143 (296)
Q Consensus 84 ~~~~~~~~~~~Il~~~-------------------~~~~~a~~i~~~l~~~g-~~F~~la~~~S~d~~~~~gG~lg~~~~ 143 (296)
...+++|+++||||+. ++++.+++|+++|+ +| .+|++||++||+++++.+||+|||+..
T Consensus 9 ~~~~~~v~~~HILi~~~~~~~p~~~~~~~~~~~~~~A~~~~~~i~~~l~-~G~~~F~~lA~~~S~~~sa~~GGdLG~~~~ 87 (123)
T 3i6c_A 9 QGEPARVRCSHLLVKHSQSRRPSSWRQEQITRTQEEALELINGYIQKIK-SGEEDFESLASQFSDCSSAKARGDLGAFSR 87 (123)
T ss_dssp --CCSEEEEEEEEECCTTSSSCCBTTBSSCCCCHHHHHHHHHHHHHHHH-HTSSCHHHHHHHHCSSGGGGGTTEEEEEET
T ss_pred cCCCcEEEEEEEEEecCCccCccccchhhhhhHHHHHHHHHHHHHHHHH-cCcccHHHHHHHhCCCchhhhCCceeeEcC
Confidence 3455899999999983 14567777788997 66 899999999999889999999999999
Q ss_pred CCCcHHHHHHHhcCCCCcee-ceeecCcceEEEeeh
Q 022496 144 GQLVPEFEEVAFTTPLNKVA-RCKTKFGWHLLQVLS 178 (296)
Q Consensus 144 ~~l~~~~~~~~~~l~~G~vs-pv~~~~G~~Ii~v~~ 178 (296)
++|+|+|.+++|.|++|++| ||+|++|||||++++
T Consensus 88 ~~l~~~f~~a~f~l~~GeiS~pv~t~~G~hIi~v~E 123 (123)
T 3i6c_A 88 GQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE 123 (123)
T ss_dssp TTSCHHHHHHHHHSCTTCBCSCEEETTEEEEEEECC
T ss_pred CCCCHHHHHHHHhCCCCCccccEEECCEEEEEEEeC
Confidence 99999999999999999999 899999999999863
No 11
>1jns_A Peptidyl-prolyl CIS-trans isomerase C; alpha-beta sandwich, CIS peptide bond; NMR {Escherichia coli} SCOP: d.26.1.1 PDB: 1jnt_A
Probab=99.90 E-value=6.4e-24 Score=156.09 Aligned_cols=89 Identities=39% Similarity=0.729 Sum_probs=83.5
Q ss_pred ceEEEeeEeeccchHHHHHHHHHHHhcCCccHHHHHHhhCCCCcccCCcccccccCCCCcHHHHHHHhcCCCCcee-cee
Q 022496 88 REILVQHLLVKEDDLNLLSELQRRVSQGREDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVAFTTPLNKVA-RCK 166 (296)
Q Consensus 88 ~~~~~~~Il~~~~~~~~a~~i~~~l~~~g~~F~~la~~~S~d~~~~~gG~lg~~~~~~l~~~~~~~~~~l~~G~vs-pv~ 166 (296)
++++++||+++.+ ++|++++++|+ +|++|+++|++||+|+++.+||+|||+..++++|+|.++++.|++|++| ||+
T Consensus 2 ~~~~~~hIl~~~~--~~A~~i~~~l~-~g~~F~~lA~~~S~~~s~~~gGdlg~~~~~~l~~~f~~a~~~l~~G~is~pv~ 78 (92)
T 1jns_A 2 KTAAALHILVKEE--KLALDLLEQIK-NGADFGKLAKKHSICPSGKRGGDLGEFRQGQMVPAFDKVVFSCPVLEPTGPLH 78 (92)
T ss_dssp CEEEEEEEEESSH--HHHHHHHHHHH-HTCCHHHHHHHHHCSTTTTTGGGCCEEETTSSCHHHHHHHHHSCTTCCEEEEE
T ss_pred CEEEEEEEEeCCH--HHHHHHHHHHH-CCCCHHHHHHHhCCCcchhcCCeeeEEcCcccCHHHHHHHHhCCCCCcCCcEE
Confidence 5799999999965 45999999996 8899999999999999999999999999999999999999999999999 899
Q ss_pred ecCcceEEEeehh
Q 022496 167 TKFGWHLLQVLSE 179 (296)
Q Consensus 167 ~~~G~~Ii~v~~~ 179 (296)
|++||||+++.++
T Consensus 79 t~~G~hIi~v~~~ 91 (92)
T 1jns_A 79 TQFGYHIIKVLYR 91 (92)
T ss_dssp ETTEEEEEEEECC
T ss_pred ECCEEEEEEEEee
Confidence 9999999999875
No 12
>2pv1_A Chaperone SURA; surviVal protein A, peptidyl-prolyl CIS-trans isomerase domain, peptide, complex; 1.30A {Escherichia coli} SCOP: d.26.1.1 PDB: 2pv2_A
Probab=99.89 E-value=1.9e-23 Score=156.89 Aligned_cols=90 Identities=22% Similarity=0.364 Sum_probs=83.9
Q ss_pred eEEEeeEeeccc----------hHHHHHHHHHHHhcCCccHHHHHHhhCCCCcccCCcccccccCCCCcHHHHHHHhcCC
Q 022496 89 EILVQHLLVKED----------DLNLLSELQRRVSQGREDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVAFTTP 158 (296)
Q Consensus 89 ~~~~~~Il~~~~----------~~~~a~~i~~~l~~~g~~F~~la~~~S~d~~~~~gG~lg~~~~~~l~~~~~~~~~~l~ 158 (296)
+++++||+++.+ ++++|++++++|+ +|++|+++|++||+|+++.+||+|||+..++|+++|.++++.|+
T Consensus 2 ~~~~~hIli~~~~~~~~~~~~~a~~~a~~i~~~l~-~g~~F~~lA~~~S~~~s~~~gG~lg~~~~~~l~~~f~~a~~~l~ 80 (103)
T 2pv1_A 2 ELNLSHILIPLPENPTSDQVNEAESQARAIVDQAR-NGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAK 80 (103)
T ss_dssp CEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHH-TTCCHHHHHHHHCCSTTGGGTTEEEEECGGGSCHHHHHHTTTCC
T ss_pred cEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHhCCCcccccCCccceEchhhcCHHHHHHHHcCC
Confidence 699999999743 4678999999996 89999999999999999999999999999999999999999999
Q ss_pred CCcee-ceeecCcceEEEeehh
Q 022496 159 LNKVA-RCKTKFGWHLLQVLSE 179 (296)
Q Consensus 159 ~G~vs-pv~~~~G~~Ii~v~~~ 179 (296)
+|++| ||+|++||||+++.++
T Consensus 81 ~G~is~pv~t~~G~hii~v~~~ 102 (103)
T 2pv1_A 81 KGDIVGPIRSGVGFHILKVNDL 102 (103)
T ss_dssp TTCEEEEEEETTEEEEEEEEEE
T ss_pred CCCeeccEEECCEEEEEEEEEE
Confidence 99999 7999999999999864
No 13
>3ui4_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; peptidyl-prolyl-isomerase; 0.80A {Homo sapiens} SCOP: d.26.1.1 PDB: 3ui5_A 3ui6_A 1fjd_A 1eq3_A
Probab=99.89 E-value=1.9e-23 Score=155.85 Aligned_cols=89 Identities=28% Similarity=0.555 Sum_probs=82.6
Q ss_pred CceEEEeeEeeccchHHHHHHHHHHHhcCCccHHHHHHhhCCCCcccCCcccccccCCCCcHHHHHHHhcCCCCcee---
Q 022496 87 DREILVQHLLVKEDDLNLLSELQRRVSQGREDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVAFTTPLNKVA--- 163 (296)
Q Consensus 87 ~~~~~~~~Il~~~~~~~~a~~i~~~l~~~g~~F~~la~~~S~d~~~~~gG~lg~~~~~~l~~~~~~~~~~l~~G~vs--- 163 (296)
.++++++||+++. +++|++++++|+ +|++|++||++||+|+ +.+||+|||++.++++++|.+++|.|++|++|
T Consensus 5 ~~~v~~~~Ilv~~--~~~A~~i~~~l~-~G~~F~~lA~~~S~d~-a~~GGdlG~~~~~~l~~~f~~a~~~l~~G~vs~~~ 80 (101)
T 3ui4_A 5 SNAVKVRHILCEK--HGKIMEAMEKLK-SGMRFNEVAAQYSEDK-ARQGGDLGWMTRGSMVGPFQEAAFALPVSGMDKPV 80 (101)
T ss_dssp GCEEEEEEEEESS--HHHHHHHHHHHH-TTCCHHHHHHHHCSSS-GGGTTEEEEEETTSSCHHHHHHHHTSCCCBTTBCC
T ss_pred CcEEEEEEEEECC--HHHHHHHHHHHH-CCCCHHHHHHHhCcCc-hhcCCceeeEcCCCCCHHHHHHHHhCCCCCCccCc
Confidence 4889999999995 455999999996 8999999999999995 78999999999999999999999999999998
Q ss_pred ----ceeecCcceEEEeehh
Q 022496 164 ----RCKTKFGWHLLQVLSE 179 (296)
Q Consensus 164 ----pv~~~~G~~Ii~v~~~ 179 (296)
||+|++|||||++.++
T Consensus 81 ~~~~pv~t~~G~hIikv~~r 100 (101)
T 3ui4_A 81 FTDPPVKTKFGYHIIMVEGR 100 (101)
T ss_dssp BCSSCEEETTEEEEEEEEEE
T ss_pred ccCCcEEECCEEEEEEEEee
Confidence 7999999999999875
No 14
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=99.89 E-value=6.7e-24 Score=160.75 Aligned_cols=95 Identities=31% Similarity=0.506 Sum_probs=85.3
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecCChHHHHhhCCCCceecccccccCCCCCccCCCCCCCcEEEEeCCChhHHHHHH
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQ 265 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~iv~~C~~G~rs~~aa~ 265 (296)
..++++++.+.+.++ +..+||||++.||..||||||+|||+..|.... ..++++++||+||.+|.||..++.
T Consensus 5 ~~i~~~~l~~~~~~~----~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~----~~l~~~~~ivvyc~~g~rs~~a~~ 76 (108)
T 1gmx_A 5 ECINVADAHQKLQEK----EAVLVDIRDPQSFAMGHAVQAFHLTNDTLGAFM----RDNDFDTPVMVMCYHGNSSKGAAQ 76 (108)
T ss_dssp EEECHHHHHHHHHTT----CCEEEECSCHHHHHHCEETTCEECCHHHHHHHH----HHSCTTSCEEEECSSSSHHHHHHH
T ss_pred cccCHHHHHHHHhCC----CCEEEEcCCHHHHHhCCCccCEeCCHHHHHHHH----HhcCCCCCEEEEcCCCchHHHHHH
Confidence 457888998888763 589999999999999999999999999886642 336889999999999999999999
Q ss_pred HHHHcCCCceEEccchHHHhhhc
Q 022496 266 WLQTQGFRRVFNVSGGIHAYATK 288 (296)
Q Consensus 266 ~L~~~G~~~v~~l~GG~~~W~~~ 288 (296)
.|+..||+||++|+||+.+|...
T Consensus 77 ~L~~~G~~~v~~l~GG~~~W~~~ 99 (108)
T 1gmx_A 77 YLLQQGYDVVYSIDGGFEAWQRQ 99 (108)
T ss_dssp HHHHHTCSSEEEETTHHHHHHHH
T ss_pred HHHHcCCceEEEecCCHHHHHHh
Confidence 99999999999999999999876
No 15
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=99.89 E-value=4.5e-24 Score=161.20 Aligned_cols=98 Identities=18% Similarity=0.331 Sum_probs=78.2
Q ss_pred HHHHHhcCCCCCCCcEEEecCChHHHHhhCCCCceecccccccCCCCCccCCCCCCCcEEEEeCCChhHHHHHHHHHHcC
Q 022496 192 ELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQWLQTQG 271 (296)
Q Consensus 192 ev~~~L~~~~~~~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~iv~~C~~G~rs~~aa~~L~~~G 271 (296)
++.+++.++ +++..+||||++.||..||||||+|||+..|... +...++++++|||||.+|.||..++..|+.+|
T Consensus 2 el~~~l~~~--~~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~~---~~~~l~~~~~ivvyc~~g~rs~~a~~~L~~~G 76 (106)
T 3hix_A 2 VLKSRLEWG--EPAFTILDVRDRSTYNDGHIMGAMAMPIEDLVDR---ASSSLEKSRDIYVYGAGDEQTSQAVNLLRSAG 76 (106)
T ss_dssp -------------CCEEEECSCHHHHHTCEETTCEECCGGGHHHH---HHHHSCTTSCEEEECSSHHHHHHHHHHHHHTT
T ss_pred hHHHHHHcC--CCCeEEEECCCHHHHhcCcCCCCEeCCHHHHHHH---HHhcCCCCCeEEEEECCCChHHHHHHHHHHcC
Confidence 345556533 1368999999999999999999999999988653 22346889999999999999999999999999
Q ss_pred CCceEEccchHHHhhhccCCCCC
Q 022496 272 FRRVFNVSGGIHAYATKVDPSIP 294 (296)
Q Consensus 272 ~~~v~~l~GG~~~W~~~~~~~~~ 294 (296)
|+||++|+||+.+|..+..|+.+
T Consensus 77 ~~~v~~l~GG~~~W~~~g~~~~~ 99 (106)
T 3hix_A 77 FEHVSELKGGLAAWKAIGGPTEL 99 (106)
T ss_dssp CSCEEECTTHHHHHHHTTCCEEE
T ss_pred CcCEEEecCCHHHHHHCCCCCCC
Confidence 99999999999999998877543
No 16
>1zk6_A Foldase protein PRSA; alpha/beta structure, isomerase; NMR {Bacillus subtilis}
Probab=99.88 E-value=3.4e-23 Score=152.57 Aligned_cols=88 Identities=32% Similarity=0.563 Sum_probs=82.7
Q ss_pred ceEEEeeEeeccchHHHHHHHHHHHhcCCccHHHHHHhhCCCCcccCCccccccc-CCCCcHHHHHHHhcCCCCcee-ce
Q 022496 88 REILVQHLLVKEDDLNLLSELQRRVSQGREDLSDLAVEHSICPSKGEGGMLGWVR-KGQLVPEFEEVAFTTPLNKVA-RC 165 (296)
Q Consensus 88 ~~~~~~~Il~~~~~~~~a~~i~~~l~~~g~~F~~la~~~S~d~~~~~gG~lg~~~-~~~l~~~~~~~~~~l~~G~vs-pv 165 (296)
++++++||+++ ++++|++++++|+ +|.+|+++|++||+|+++.+||+|||++ .++++|+|.++++.|++|++| ||
T Consensus 3 ~~~~~~hIl~~--~~~~A~~i~~~l~-~g~~F~~lA~~~S~~~s~~~gG~lg~~~~~~~l~~~f~~a~~~l~~G~is~pv 79 (93)
T 1zk6_A 3 GKIRASHILVA--DKKTAEEVEKKLK-KGEKFEDLAKEYSTDSSASKGGDLGWFAKEGQMDETFSKAAFKLKTGEVSDPV 79 (93)
T ss_dssp CCEEEEEEEES--SHHHHHHHHHHHH-HTCCHHHHHHHHCCSGGGGGTTEEEEECTTTSSCTTHHHHHHHSCTTCBCCCE
T ss_pred CEEEEEEEEec--cHHHHHHHHHHHH-CCCCHHHHHHHhCCCchhhhCCeeeeecccccCCHHHHHHHHcCCCCCccceE
Confidence 67999999999 4566999999996 7899999999999999999999999999 999999999999999999999 89
Q ss_pred eecCcceEEEeeh
Q 022496 166 KTKFGWHLLQVLS 178 (296)
Q Consensus 166 ~~~~G~~Ii~v~~ 178 (296)
++++||||+++.+
T Consensus 80 ~t~~G~hIi~v~~ 92 (93)
T 1zk6_A 80 KTQYGYHIIKKTE 92 (93)
T ss_dssp ECSSCEEEEEEEE
T ss_pred EECCEEEEEEEec
Confidence 9999999999864
No 17
>3tc5_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; PIN1 mutant (R14A), oncogenic transformation, small molecule cycle, rotamase, phosphoprotein; HET: 3T5 P6G; 1.40A {Homo sapiens} PDB: 2itk_A* 2q5a_A* 2xp3_A* 2xp4_A* 2xp5_A* 2xp7_A* 2xp8_A* 2xp9_A* 2xpa_A* 2xpb_A* 3kab_A* 3kag_A* 3kah_A* 3kai_A* 3kce_A* 3ntp_A* 3odk_A* 3oob_A* 2zr6_A* 1f8a_B* ...
Probab=99.88 E-value=1.4e-22 Score=164.30 Aligned_cols=93 Identities=28% Similarity=0.458 Sum_probs=82.0
Q ss_pred CCCceEEEeeEeecc-------------------chHHHHHHHHHHHhcCC-ccHHHHHHhhCCCCcccCCcccccccCC
Q 022496 85 GGDREILVQHLLVKE-------------------DDLNLLSELQRRVSQGR-EDLSDLAVEHSICPSKGEGGMLGWVRKG 144 (296)
Q Consensus 85 ~~~~~~~~~~Il~~~-------------------~~~~~a~~i~~~l~~~g-~~F~~la~~~S~d~~~~~gG~lg~~~~~ 144 (296)
..+.+++++||||+. ++++.+++|+++|+ +| .+|++||++||+|+++.+||+|||+..+
T Consensus 53 ~~~~~v~~~HILi~~~~~~~p~~~~~~~~~~~~~~A~~~~~~i~~~l~-~g~~~F~~lA~~~Sd~~sa~~GGdLG~~~~~ 131 (166)
T 3tc5_A 53 GEPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIK-SGEEDFESLASQFSDCSSAKARGDLGAFSRG 131 (166)
T ss_dssp -CCSCEEEEEEEECCTTSSSCCBTTBSSCCCCHHHHHHHHHHHHHHHH-HTSSCHHHHHHHHCSSGGGGGTTEEEEECTT
T ss_pred ccccceeEeeeEEecccccCccccchhhhhhHHHHHHHHHHHHHHHHH-cCccCHHHHHHHhCcccHHhcCCccceeccc
Confidence 345899999999983 14556667777997 56 8999999999998999999999999999
Q ss_pred CCcHHHHHHHhcCCCCcee-ceeecCcceEEEeeh
Q 022496 145 QLVPEFEEVAFTTPLNKVA-RCKTKFGWHLLQVLS 178 (296)
Q Consensus 145 ~l~~~~~~~~~~l~~G~vs-pv~~~~G~~Ii~v~~ 178 (296)
+|+++|.+++|.|++|++| ||+|++|||||++++
T Consensus 132 ~l~~~f~~a~f~l~~GeiS~pv~t~~G~hIi~v~e 166 (166)
T 3tc5_A 132 QMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE 166 (166)
T ss_dssp SSCHHHHHHHHHSCTTCBCCCEEETTEEEEEEECC
T ss_pred ccCHHHHHHHHhCCCCCCcccEEECCEEEEEEEeC
Confidence 9999999999999999999 899999999999863
No 18
>2kgj_A Peptidyl-prolyl CIS-trans isomerase D; prolyl isomerase, parvulin, cell inner membrane, cell membrane, membrane, rotamase, stress response; NMR {Escherichia coli}
Probab=99.88 E-value=2.5e-23 Score=155.64 Aligned_cols=93 Identities=15% Similarity=0.277 Sum_probs=86.7
Q ss_pred ceEEEeeEeeccchHHHHHHHHHHHhcCCccHHHHHHhhCCCC-cccCCcccccccCCCCcHHHHHHHhcCCCCcee-ce
Q 022496 88 REILVQHLLVKEDDLNLLSELQRRVSQGREDLSDLAVEHSICP-SKGEGGMLGWVRKGQLVPEFEEVAFTTPLNKVA-RC 165 (296)
Q Consensus 88 ~~~~~~~Il~~~~~~~~a~~i~~~l~~~g~~F~~la~~~S~d~-~~~~gG~lg~~~~~~l~~~~~~~~~~l~~G~vs-pv 165 (296)
++++++|||+...++++|++++++|+ +|++|++||++||+|+ ++.+||+|||++.++|+|+|.+++|. ++|++| ||
T Consensus 2 ~~~~~~hIl~~~~~~~~A~~i~~~l~-~G~~F~~lA~~~S~d~~sa~~GGdlG~~~~~~l~~~f~~a~~~-~~GeiS~pv 79 (102)
T 2kgj_A 2 QPQRTRYSIIQTKTEDEAKAVLDELN-KGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLK-EKGQLSGVI 79 (102)
T ss_dssp CCCEEEEEEEEESSHHHHHHHHHHHH-HTSCHHHHHHHTCTTHHHHTTTSEEEEEETTCCCHHHHTTCCC-STTCEEEEE
T ss_pred CEEEEEeeecChhhHHHHHHHHHHHH-CCCCHHHHHHHhCCCchhhhcCCccceecccccCHHHHHHHhc-CCCCccccE
Confidence 57999999996667888999999996 7899999999999998 99999999999999999999999999 999999 89
Q ss_pred eecCcceEEEeehhhhh
Q 022496 166 KTKFGWHLLQVLSEREA 182 (296)
Q Consensus 166 ~~~~G~~Ii~v~~~~~~ 182 (296)
+|++|||||++.++++.
T Consensus 80 ~t~~G~hIikv~~~~~~ 96 (102)
T 2kgj_A 80 KSSVGFLIVRLDDIQAA 96 (102)
T ss_dssp EETTEEEEEEEEEEECS
T ss_pred EECCEEEEEEEeecccc
Confidence 99999999999987764
No 19
>2rqs_A Parvulin-like peptidyl-prolyl isomerase; CIS/trans isomerisation, cenarcheaum symbiosum, low temperat NIMA-kinase, PIN1, cell cycle; NMR {Cenarchaeum symbiosum}
Probab=99.88 E-value=1.8e-22 Score=149.75 Aligned_cols=89 Identities=33% Similarity=0.538 Sum_probs=82.3
Q ss_pred CceEEEeeEeeccchHHHHHHHHHHHhcCCccHHHHHHhhCCC-CcccCCcccccccCCCCcHHHHHHHhcCCCCcee-c
Q 022496 87 DREILVQHLLVKEDDLNLLSELQRRVSQGREDLSDLAVEHSIC-PSKGEGGMLGWVRKGQLVPEFEEVAFTTPLNKVA-R 164 (296)
Q Consensus 87 ~~~~~~~~Il~~~~~~~~a~~i~~~l~~~g~~F~~la~~~S~d-~~~~~gG~lg~~~~~~l~~~~~~~~~~l~~G~vs-p 164 (296)
+++++++||+++ ++++|++++++|+ +|++|+++|++||+| +++.+||+|||+..++++++|.+++++|++|++| |
T Consensus 7 ~~~~~~~hIl~~--~~~~A~~i~~~l~-~g~~F~~lA~~~S~d~~s~~~GG~lG~~~~~~l~~~f~~a~~~l~~G~is~p 83 (97)
T 2rqs_A 7 ADKIKCSHILVK--KQGEALAVQERLK-AGEKFGKLAKELSIDGGSAKRDGSLGYFGRGKMVKPFEDAAFRLQVGEVSEP 83 (97)
T ss_dssp CCSEEEEEEEES--CHHHHHHHHHHHT-TTCCHHHHHHHTCCCCGGGGGTTEEEEECTTSSCHHHHHHHTTCTTSCBCCC
T ss_pred cceEEEEEEEeC--CHHHHHHHHHHHH-CCCCHHHHHHHhCCCCcchhcCceeeeEcCCCCCHHHHHHHHcCCCCCcccc
Confidence 478999999999 4566999999996 899999999999966 6999999999999999999999999999999999 8
Q ss_pred eeecCcceEEEeeh
Q 022496 165 CKTKFGWHLLQVLS 178 (296)
Q Consensus 165 v~~~~G~~Ii~v~~ 178 (296)
|++++||||+++.+
T Consensus 84 v~t~~G~hIi~v~d 97 (97)
T 2rqs_A 84 VKSEFGYHVIKRLG 97 (97)
T ss_dssp EECSSCEEEEEECC
T ss_pred EEECCEEEEEEEeC
Confidence 99999999999863
No 20
>2jzv_A Foldase protein PRSA; ppiase, parvulin, proline isomerase, lipoprotein, membrane, palmitate, rotamase; NMR {Staphylococcus aureus}
Probab=99.88 E-value=1.7e-22 Score=153.63 Aligned_cols=93 Identities=28% Similarity=0.429 Sum_probs=85.1
Q ss_pred CCCCceEEEeeEeeccc-------------hHHHHHHHHHHHhcCC-ccHHHHHHhhCCCC-cccCCcccccccCCCCcH
Q 022496 84 GGGDREILVQHLLVKED-------------DLNLLSELQRRVSQGR-EDLSDLAVEHSICP-SKGEGGMLGWVRKGQLVP 148 (296)
Q Consensus 84 ~~~~~~~~~~~Il~~~~-------------~~~~a~~i~~~l~~~g-~~F~~la~~~S~d~-~~~~gG~lg~~~~~~l~~ 148 (296)
|..+++++++||+++.+ ++++|++++++|+ +| .+|+++|++||+|+ ++.+||+|||+..++|++
T Consensus 2 p~~~~~~~~~hIli~~~~~~~~~~~~~~~~~~~~a~~i~~~l~-~g~~~F~~lA~~~S~d~~s~~~gG~lG~~~~~~l~~ 80 (111)
T 2jzv_A 2 PLGSDSKKASHILIKVKSKKSDKEGLDDKEAKQKAEEIQKEVS-KDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDK 80 (111)
T ss_dssp CCCCSEEEEEEEEEEBCSCSSCSSSBCHHHHHHHHHHHHHHHH-SCTTSHHHHHHHHCSCHHHHTTTTEEEEEETTSSCH
T ss_pred CCCCcEEEEEEEEEECCCCCChhhhhhHHHHHHHHHHHHHHHH-cCcccHHHHHHHHCCCcchhhhCCccceecCCcccH
Confidence 34568999999999821 5778999999996 77 99999999999998 999999999999999999
Q ss_pred HHHHHHhcCCCCcee-ceeecCcceEEEee
Q 022496 149 EFEEVAFTTPLNKVA-RCKTKFGWHLLQVL 177 (296)
Q Consensus 149 ~~~~~~~~l~~G~vs-pv~~~~G~~Ii~v~ 177 (296)
+|.+++|.|++|++| ||+|++|||||++.
T Consensus 81 ~f~~a~~~l~~G~is~pv~t~~G~hIi~v~ 110 (111)
T 2jzv_A 81 DFEKALFKLKDGEVSEVVKSSFGYHIIKAD 110 (111)
T ss_dssp HHHHHHHTCCTTCBCCCEEETTEEEEEEEC
T ss_pred HHHHHHHhCCCCCcCccEEECCEEEEEEEe
Confidence 999999999999999 79999999999985
No 21
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=99.88 E-value=4.3e-23 Score=152.38 Aligned_cols=91 Identities=19% Similarity=0.411 Sum_probs=76.8
Q ss_pred CCCHHHHHHHhcCCCCCCCcEEEecCChHHHHhhCCCCceecccccccCCCCCccCCCCCCCcEEEEeCCChhHHHHHHH
Q 022496 187 DIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQW 266 (296)
Q Consensus 187 ~is~~ev~~~L~~~~~~~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~iv~~C~~G~rs~~aa~~ 266 (296)
.++++++.+.+.+ +..+||||++.||..||||||+|+|+.++.... ..+++ ++||+||.+|.||..++..
T Consensus 3 ~is~~~l~~~~~~-----~~~liDvR~~~e~~~ghi~gAi~ip~~~l~~~~----~~l~~-~~ivvyC~~g~rs~~a~~~ 72 (94)
T 1wv9_A 3 KVRPEELPALLEE-----GVLVVDVRPADRRSTPLPFAAEWVPLEKIQKGE----HGLPR-RPLLLVCEKGLLSQVAALY 72 (94)
T ss_dssp EECGGGHHHHHHT-----TCEEEECCCC--CCSCCSSCCEECCHHHHTTTC----CCCCS-SCEEEECSSSHHHHHHHHH
T ss_pred cCCHHHHHHHHHC-----CCEEEECCCHHHHhcccCCCCEECCHHHHHHHH----HhCCC-CCEEEEcCCCChHHHHHHH
Confidence 4677788887764 578999999999999999999999999987653 33578 9999999999999999999
Q ss_pred HHHcCCCceEEccchHHHhhhc
Q 022496 267 LQTQGFRRVFNVSGGIHAYATK 288 (296)
Q Consensus 267 L~~~G~~~v~~l~GG~~~W~~~ 288 (296)
|+.+||+ |++|+||+.+|..+
T Consensus 73 L~~~G~~-v~~l~GG~~~W~~~ 93 (94)
T 1wv9_A 73 LEAEGYE-AMSLEGGLQALTQG 93 (94)
T ss_dssp HHHHTCC-EEEETTGGGCC---
T ss_pred HHHcCCc-EEEEcccHHHHHhC
Confidence 9999998 99999999999864
No 22
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=99.88 E-value=8.4e-23 Score=161.34 Aligned_cols=102 Identities=23% Similarity=0.474 Sum_probs=88.1
Q ss_pred hcCCCHHHHHHHhcCCCCCCCcEEEecCChHHHHh-hC--CCCceecccccccCCCCCccCCCCCCCcEEEEeCCChhHH
Q 022496 185 LQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVAL-SS--LPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSL 261 (296)
Q Consensus 185 ~~~is~~ev~~~L~~~~~~~~~~llDvR~~~ey~~-gh--IpgA~~ip~~~l~~~~~~~~~~~~~~~~iv~~C~~G~rs~ 261 (296)
...++.+++.+++.+. ++..+||||++.||.. || ||||+|||+..+... .....++++++|||||.+|.||.
T Consensus 22 ~~~is~~el~~~l~~~---~~~~liDVR~~~E~~~~gh~~IpgAinip~~~l~~~--~~~~~l~~~~~ivvyC~~G~rS~ 96 (137)
T 1qxn_A 22 MVMLSPKDAYKLLQEN---PDITLIDVRDPDELKAMGKPDVKNYKHMSRGKLEPL--LAKSGLDPEKPVVVFCKTAARAA 96 (137)
T ss_dssp SEEECHHHHHHHHHHC---TTSEEEECCCHHHHHHTCEECCSSEEECCTTTSHHH--HHHHCCCTTSCEEEECCSSSCHH
T ss_pred CcccCHHHHHHHHhcC---CCeEEEECCCHHHHHhcCCcCCCCCEEcchHHhhhH--HhhccCCCCCeEEEEcCCCcHHH
Confidence 3568899999988721 3689999999999999 99 999999999887541 01234689999999999999999
Q ss_pred HHHHHHHHcCCCceEEccchHHHhhhccCC
Q 022496 262 QVAQWLQTQGFRRVFNVSGGIHAYATKVDP 291 (296)
Q Consensus 262 ~aa~~L~~~G~~~v~~l~GG~~~W~~~~~~ 291 (296)
.++..|+.+||+||++|+|||.+|..+..|
T Consensus 97 ~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p 126 (137)
T 1qxn_A 97 LAGKTLREYGFKTIYNSEGGMDKWLEEGLP 126 (137)
T ss_dssp HHHHHHHHHTCSCEEEESSCHHHHHHTTCC
T ss_pred HHHHHHHHcCCcceEEEcCcHHHHHHCCCC
Confidence 999999999999999999999999988765
No 23
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=99.87 E-value=3e-23 Score=162.20 Aligned_cols=102 Identities=25% Similarity=0.359 Sum_probs=84.0
Q ss_pred hcCCCHHHHHHHhcCCCCCCCcEEEecCChHHHHhhCCCCceecccccccCC--------CCCccCCCCCCCcEEEEeCC
Q 022496 185 LQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSW--------GPDITVKFDPQKDTYVMCHH 256 (296)
Q Consensus 185 ~~~is~~ev~~~L~~~~~~~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~~~--------~~~~~~~~~~~~~iv~~C~~ 256 (296)
...++++++.+++.. +..+||||++.||..||||||+|||+..+... ...+...++++++|||||.+
T Consensus 17 ~~~is~~e~~~~l~~-----~~~lIDvR~~~e~~~ghIpgAinip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivvyC~~ 91 (129)
T 1tq1_A 17 PSSVSVTVAHDLLLA-----GHRYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNTDFLEQVSSHFGQSDNIIVGCQS 91 (129)
T ss_dssp CEEEEHHHHHHHHHH-----TCCEEEESCHHHHHHCCBTTBEECCSCCCSTTTCCCTTTHHHHHTTTCCTTSSEEEEESS
T ss_pred CcccCHHHHHHHhcC-----CCEEEECCCHHHHhcCCCCCcEECcHhhcccccccCCHHHHHHHHhhCCCCCeEEEECCC
Confidence 356888888888862 57899999999999999999999999433210 01122346889999999999
Q ss_pred ChhHHHHHHHHHHcCCCceEEccchHHHhhhccCC
Q 022496 257 GMRSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDP 291 (296)
Q Consensus 257 G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~~~~ 291 (296)
|.||..++..|+.+||+||++|+|||.+|.....|
T Consensus 92 G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p 126 (129)
T 1tq1_A 92 GGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLP 126 (129)
T ss_dssp CSHHHHHHHHHHHHHCCSEEEEECCHHHHHHHTCC
T ss_pred CcHHHHHHHHHHHcCCCCeEEeCCcHHHHHhCCCC
Confidence 99999999999999999999999999999987544
No 24
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=99.87 E-value=2.4e-22 Score=159.02 Aligned_cols=107 Identities=18% Similarity=0.316 Sum_probs=89.4
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecCChHHHHhhCCCCceecccccccCCCC----Cc-----cCCCCCCCcEEEEeCC
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGP----DI-----TVKFDPQKDTYVMCHH 256 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~~~~~----~~-----~~~~~~~~~iv~~C~~ 256 (296)
..++.+++.+++.++ .++..+||||++.||..||||||+|||+..+..... .+ ...++++++|||||.+
T Consensus 23 ~~is~~el~~~l~~~--~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ivvyC~~ 100 (139)
T 3d1p_A 23 QSYSFEDMKRIVGKH--DPNVVLVDVREPSEYSIVHIPASINVPYRSHPDAFALDPLEFEKQIGIPKPDSAKELIFYCAS 100 (139)
T ss_dssp EECCHHHHHHHHHHT--CTTEEEEECSCHHHHHHCCCTTCEECCTTTCTTGGGSCHHHHHHHHSSCCCCTTSEEEEECSS
T ss_pred ceecHHHHHHHHhCC--CCCeEEEECcCHHHHhCCCCCCcEEcCHHHhhhhccCCHHHHHHHHhccCCCCCCeEEEECCC
Confidence 568899999888642 136889999999999999999999999998854321 00 0235789999999999
Q ss_pred ChhHHHHHHHHHHcCCCceEEccchHHHhhhccCCCCC
Q 022496 257 GMRSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDPSIP 294 (296)
Q Consensus 257 G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~~~~~~~ 294 (296)
|.||..++..|+.+||+||++|+|||.+|.....|.+.
T Consensus 101 G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 138 (139)
T 3d1p_A 101 GKRGGEAQKVASSHGYSNTSLYPGSMNDWVSHGGDKLD 138 (139)
T ss_dssp SHHHHHHHHHHHTTTCCSEEECTTHHHHHHHTTGGGCC
T ss_pred CchHHHHHHHHHHcCCCCeEEeCCcHHHHHHcCCCCCC
Confidence 99999999999999999999999999999998777543
No 25
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=99.87 E-value=1.3e-22 Score=160.59 Aligned_cols=106 Identities=20% Similarity=0.354 Sum_probs=88.0
Q ss_pred hcCCCHHHHHHHhcCCCCCCCcEEEecCChHHHHh-hCCCCceecccccccCCCC----CccCCCCCCCcEEEEeCCChh
Q 022496 185 LQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVAL-SSLPGFQVLPLRQFGSWGP----DITVKFDPQKDTYVMCHHGMR 259 (296)
Q Consensus 185 ~~~is~~ev~~~L~~~~~~~~~~llDvR~~~ey~~-ghIpgA~~ip~~~l~~~~~----~~~~~~~~~~~iv~~C~~G~r 259 (296)
...++.+++.+.+.++ .++..+||||++.||.. ||||||+|||+..+..... .....++++++|||||.+|.|
T Consensus 21 ~~~is~~~l~~~l~~~--~~~~~liDvR~~~e~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~~~~~ivvyC~~G~r 98 (139)
T 2hhg_A 21 IETLTTADAIALHKSG--ASDVVIVDIRDPREIERDGKIPGSFSCTRGMLEFWIDPQSPYAKPIFQEDKKFVFYCAGGLR 98 (139)
T ss_dssp SEEECHHHHHHHHHTT--CTTEEEEECSCHHHHHHHCCCTTCEECCGGGHHHHHCTTSTTCCGGGGSSSEEEEECSSSHH
T ss_pred cCccCHHHHHHHHhcc--CCCeEEEECCCHHHHHhCCCCCCeEECChHHHHHhcCccchhhhccCCCCCeEEEECCCChH
Confidence 3568899999988731 13678999999999998 9999999999987743211 112346789999999999999
Q ss_pred HHHHHHHHHHcCCCceEEccchHHHhhhccCCC
Q 022496 260 SLQVAQWLQTQGFRRVFNVSGGIHAYATKVDPS 292 (296)
Q Consensus 260 s~~aa~~L~~~G~~~v~~l~GG~~~W~~~~~~~ 292 (296)
|..+++.|+.+||+||++|+|||.+|..+..|.
T Consensus 99 s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~ 131 (139)
T 2hhg_A 99 SALAAKTAQDMGLKPVAHIEGGFGAWRDAGGPI 131 (139)
T ss_dssp HHHHHHHHHHHTCCSEEEETTHHHHHHHTTCCC
T ss_pred HHHHHHHHHHcCCCCeEEecCCHHHHHHCCCCe
Confidence 999999999999999999999999999876553
No 26
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=99.87 E-value=1.1e-22 Score=161.44 Aligned_cols=99 Identities=18% Similarity=0.345 Sum_probs=86.4
Q ss_pred CCHHHHHHHhcCCCCCCCcEEEecCChHHHHhhCCCCceecccccccCCCCCccCCCCCCCcEEEEeCCChhHHHHHHHH
Q 022496 188 IQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQWL 267 (296)
Q Consensus 188 is~~ev~~~L~~~~~~~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~iv~~C~~G~rs~~aa~~L 267 (296)
|+++++.+++.++. ++..+||||++.||..||||||+|||+..|.... ...++++++|||||.+|.||..+++.|
T Consensus 2 Is~~el~~~l~~~~--~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~~~---~~~l~~~~~ivvyC~~g~rs~~aa~~L 76 (141)
T 3ilm_A 2 SDAHVLKSRLEWGE--PAFTILDVRDRSTYNDGHIMGAMAMPIEDLVDRA---SSSLEKSRDIYVYGAGDEQTSQAVNLL 76 (141)
T ss_dssp CCHHHHHHHHHHSC--SCEEEEECSCHHHHHHCEETTCEECCGGGHHHHH---HTTSCTTSEEEEECSSHHHHHHHHHHH
T ss_pred CCHHHHHHHHhcCC--CCEEEEECCCHHHHhCCCCCCCEEcCHHHHHHHH---HhcCCCCCeEEEEECCChHHHHHHHHH
Confidence 67888888887541 3579999999999999999999999999886542 234688999999999999999999999
Q ss_pred HHcCCCceEEccchHHHhhhccCC
Q 022496 268 QTQGFRRVFNVSGGIHAYATKVDP 291 (296)
Q Consensus 268 ~~~G~~~v~~l~GG~~~W~~~~~~ 291 (296)
+.+||+||++|+||+.+|..+..|
T Consensus 77 ~~~G~~~v~~l~GG~~~W~~~g~p 100 (141)
T 3ilm_A 77 RSAGFEHVSELKGGLAAWKAIGGP 100 (141)
T ss_dssp HHTTCCSEEECTTHHHHHHHTTCC
T ss_pred HHcCCCCEEEecCHHHHHHHCCCC
Confidence 999999999999999999987654
No 27
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=99.86 E-value=8e-23 Score=158.70 Aligned_cols=102 Identities=18% Similarity=0.257 Sum_probs=89.1
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecCChHHH-HhhCCCCceecccccccCCCCCccCCCCCCCcEEEEeCCChh--HHH
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEV-ALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMR--SLQ 262 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR~~~ey-~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~iv~~C~~G~r--s~~ 262 (296)
..++.+++.+.+.++. ++..+||||++.|| ..||||||+|||+..|.... ..++++++|||||.+|.| |..
T Consensus 15 ~~is~~el~~~l~~~~--~~~~liDvR~~~e~~~~ghIpgA~nip~~~l~~~~----~~l~~~~~ivvyC~~g~r~~s~~ 88 (124)
T 3flh_A 15 LYIDHHTVLADMQNAT--GKYVVLDVRNAPAQVKKDQIKGAIAMPAKDLATRI----GELDPAKTYVVYDWTGGTTLGKT 88 (124)
T ss_dssp TEECHHHHHHHHHHTC--CCEEEEECCCSCHHHHCCEETTCEECCHHHHHHHG----GGSCTTSEEEEECSSSSCSHHHH
T ss_pred ceecHHHHHHHHHcCC--CCEEEEECCCHHHHHhcCcCCCCEECCHHHHHHHH----hcCCCCCeEEEEeCCCCchHHHH
Confidence 4588999999887641 24899999999998 99999999999999987643 346889999999999999 899
Q ss_pred HHHHHHHcCCCceEEccchHHHhhhccCCCCC
Q 022496 263 VAQWLQTQGFRRVFNVSGGIHAYATKVDPSIP 294 (296)
Q Consensus 263 aa~~L~~~G~~~v~~l~GG~~~W~~~~~~~~~ 294 (296)
++..|+.+||+ |++|+||+.+|..+..|..|
T Consensus 89 a~~~L~~~G~~-v~~l~GG~~~W~~~~~p~~~ 119 (124)
T 3flh_A 89 ALLVLLSAGFE-AYELAGALEGWKGMQLPLEH 119 (124)
T ss_dssp HHHHHHHHTCE-EEEETTHHHHHHHTTCCEEC
T ss_pred HHHHHHHcCCe-EEEeCCcHHHHHHcCCCCCc
Confidence 99999999996 99999999999999888655
No 28
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=99.86 E-value=1.5e-21 Score=155.40 Aligned_cols=100 Identities=18% Similarity=0.261 Sum_probs=86.4
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecCChHHHHhhCCCCceecccccccCCCCCccCCCCCCCcEEEEeCCC--hhHHHH
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHG--MRSLQV 263 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~iv~~C~~G--~rs~~a 263 (296)
..++.+++.+.+.++. ++..+||||++.||..||||||+|||+..+... ....++++++|||||.+| .||..+
T Consensus 16 ~~is~~el~~~l~~~~--~~~~liDvR~~~ey~~ghIpgAinip~~~l~~~---~~~~l~~~~~ivvyC~~g~~~rs~~a 90 (144)
T 3nhv_A 16 YETDIADLSIDIKKGY--EGIIVVDVRDAEAYKECHIPTAISIPGNKINED---TTKRLSKEKVIITYCWGPACNGATKA 90 (144)
T ss_dssp TEEEHHHHHHHHHTTC--CSEEEEECSCHHHHHHCBCTTCEECCGGGCSTT---TTTTCCTTSEEEEECSCTTCCHHHHH
T ss_pred cccCHHHHHHHHHcCC--CCEEEEECcCHHHHhcCCCCCCEECCHHHHhHH---HHhhCCCCCeEEEEECCCCccHHHHH
Confidence 4578889999887641 368999999999999999999999999988642 234568999999999999 699999
Q ss_pred HHHHHHcCCCceEEccchHHHhhhccCC
Q 022496 264 AQWLQTQGFRRVFNVSGGIHAYATKVDP 291 (296)
Q Consensus 264 a~~L~~~G~~~v~~l~GG~~~W~~~~~~ 291 (296)
+..|+.+|| +|++|+|||.+|..+..|
T Consensus 91 a~~L~~~G~-~v~~l~GG~~~W~~~g~p 117 (144)
T 3nhv_A 91 AAKFAQLGF-RVKELIGGIEYWRKENGE 117 (144)
T ss_dssp HHHHHHTTC-EEEEEESHHHHHHHTTCC
T ss_pred HHHHHHCCC-eEEEeCCcHHHHHHCCCC
Confidence 999999999 699999999999987654
No 29
>1j6y_A Peptidyl-prolyl CIS-trans isomerase; parvulin, PIN1, phosphorylation; NMR {Arabidopsis thaliana} SCOP: d.26.1.1
Probab=99.85 E-value=4.8e-22 Score=156.76 Aligned_cols=92 Identities=22% Similarity=0.449 Sum_probs=82.5
Q ss_pred CCCceEEEeeEeeccc-----------------------hHHHHHHHHHHHhcCCc-cHHHHHHhhCCCCcccCCccccc
Q 022496 85 GGDREILVQHLLVKED-----------------------DLNLLSELQRRVSQGRE-DLSDLAVEHSICPSKGEGGMLGW 140 (296)
Q Consensus 85 ~~~~~~~~~~Il~~~~-----------------------~~~~a~~i~~~l~~~g~-~F~~la~~~S~d~~~~~gG~lg~ 140 (296)
..+++++++|||++.+ ++++|++|+++|+ .|. +|++||++||+|+++.+||+|||
T Consensus 22 ~~~~~v~~~HILi~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~a~~i~~~l~-~G~~~F~~lA~~~S~~~sa~~GGdLG~ 100 (139)
T 1j6y_A 22 ASRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIV-SGKANFEEVATRVSDCSSAKRGGDLGS 100 (139)
T ss_dssp SSCCSCEEECCEECSCTTSSSSSCSCCCSCCCSCCCHHHHHHHHHHHHHHHH-SSCCCCHHHHHHSSCHHHHHTCSEEEE
T ss_pred CCCCeEEEEEEEEecCccccccccccccccccchHHHHHHHHHHHHHHHHHH-cCcccHHHHHHHhccCchhhcCCeeee
Confidence 3448899999999742 3566889999996 777 69999999999888899999999
Q ss_pred ccCCCCcHHHHHHHhcCCCCcee-ceeecCcceEEEee
Q 022496 141 VRKGQLVPEFEEVAFTTPLNKVA-RCKTKFGWHLLQVL 177 (296)
Q Consensus 141 ~~~~~l~~~~~~~~~~l~~G~vs-pv~~~~G~~Ii~v~ 177 (296)
+..++|+|+|.+++|.|++|++| ||+|++|||||++.
T Consensus 101 ~~~~~l~~~f~~a~~~l~~GeiS~pv~t~~G~hIikv~ 138 (139)
T 1j6y_A 101 FGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRT 138 (139)
T ss_dssp CSSSSSCTHHHHHHHHCCSSSCCSCEEETTEEECCCSC
T ss_pred ecccccCHHHHHHHHcCCCCCccccEEECCEEEEEEEe
Confidence 99999999999999999999999 89999999999875
No 30
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=99.84 E-value=4.7e-22 Score=151.07 Aligned_cols=85 Identities=18% Similarity=0.314 Sum_probs=74.9
Q ss_pred CCcEEEecCChHHHHhhCCCCceecccccccCCCCCccCCCCCCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccchHH
Q 022496 204 KEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 283 (296)
Q Consensus 204 ~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~ 283 (296)
++..+||||++.||..||||||+|+|+..+...... ..++++++|||||.+|.||..++..|+.+||++ ++|+||+.
T Consensus 15 ~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~~~~~--~~~~~~~~ivvyC~~G~rs~~aa~~L~~~G~~~-~~l~GG~~ 91 (110)
T 2k0z_A 15 NDFIVVDVRELDEYEELHLPNATLISVNDQEKLADF--LSQHKDKKVLLHCRAGRRALDAAKSMHELGYTP-YYLEGNVY 91 (110)
T ss_dssp GGSEEEEEECHHHHHHSBCTTEEEEETTCHHHHHHH--HHSCSSSCEEEECSSSHHHHHHHHHHHHTTCCC-EEEESCGG
T ss_pred CCeEEEECCCHHHHhcCcCCCCEEcCHHHHHHHHHh--cccCCCCEEEEEeCCCchHHHHHHHHHHCCCCE-EEecCCHH
Confidence 468999999999999999999999999988653211 136789999999999999999999999999999 99999999
Q ss_pred HhhhccCC
Q 022496 284 AYATKVDP 291 (296)
Q Consensus 284 ~W~~~~~~ 291 (296)
+|..+..|
T Consensus 92 ~W~~~g~p 99 (110)
T 2k0z_A 92 DFEKYGFR 99 (110)
T ss_dssp GTTTTTCC
T ss_pred HHHHCCCc
Confidence 99987654
No 31
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=99.84 E-value=2.9e-22 Score=145.05 Aligned_cols=80 Identities=28% Similarity=0.390 Sum_probs=70.5
Q ss_pred cEEEecCChHHHHhhCCCCceecccccccCCCCCccCCCCCCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccchHHHh
Q 022496 206 AQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHAY 285 (296)
Q Consensus 206 ~~llDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W 285 (296)
..+||||++.||..||||||+|+|+.++......+ ..+++++||+||.+|.||..++..|+++||+||+++ |||.+|
T Consensus 2 ~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l--~~~~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~l-GG~~~w 78 (85)
T 2jtq_A 2 EHWIDVRVPEQYQQEHVQGAINIPLKEVKERIATA--VPDKNDTVKVYCNAGRQSGQAKEILSEMGYTHVENA-GGLKDI 78 (85)
T ss_dssp EEEEECSCHHHHTTEEETTCEECCHHHHHHHHHHH--CCCTTSEEEEEESSSHHHHHHHHHHHHTTCSSEEEE-EETTTC
T ss_pred CEEEECCCHHHHHhCCCCCCEEcCHHHHHHHHHHh--CCCCCCcEEEEcCCCchHHHHHHHHHHcCCCCEEec-cCHHHH
Confidence 57999999999999999999999999886543222 137899999999999999999999999999999999 999999
Q ss_pred hhc
Q 022496 286 ATK 288 (296)
Q Consensus 286 ~~~ 288 (296)
...
T Consensus 79 ~~~ 81 (85)
T 2jtq_A 79 AMP 81 (85)
T ss_dssp CSC
T ss_pred hcc
Confidence 753
No 32
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=99.83 E-value=7.5e-22 Score=158.59 Aligned_cols=102 Identities=15% Similarity=0.203 Sum_probs=84.6
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecCChHHHHhhCCCCceecccccccCCCCCccCCCCCCCcEEEEeC-CChhHHHHH
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCH-HGMRSLQVA 264 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~iv~~C~-~G~rs~~aa 264 (296)
..++.+++.+.+.+ ++..+||||++.||..||||||+|||+..+......+...++++++|||||. +|.||..++
T Consensus 28 ~~Is~~el~~~l~~----~~~~lIDvR~~~ey~~ghIpgAinip~~~l~~~~~~l~~~~~~~~~iVvyC~~~G~rs~~aa 103 (152)
T 1t3k_A 28 SYITSTQLLPLHRR----PNIAIIDVRDEERNYDGHIAGSLHYASGSFDDKISHLVQNVKDKDTLVFHSALSQVRGPTCA 103 (152)
T ss_dssp EEECTTTTTTCCCC----TTEEEEEESCSHHHHSSCCCSSEEECCSSSSTTHHHHHHTCCSCCEEEESSSCCSSSHHHHH
T ss_pred ceECHHHHHHHhcC----CCEEEEECCChhhccCccCCCCEECCHHHHHHHHHHHHHhcCCCCEEEEEcCCCCcchHHHH
Confidence 44667777666653 3678999999999999999999999999887654444444578999999999 999999999
Q ss_pred HHHHH--------cCCCceEEccchHHHhhhccCC
Q 022496 265 QWLQT--------QGFRRVFNVSGGIHAYATKVDP 291 (296)
Q Consensus 265 ~~L~~--------~G~~~v~~l~GG~~~W~~~~~~ 291 (296)
..|.+ .||+||++|+|||.+|..+..|
T Consensus 104 ~~L~~~l~~~L~~~G~~~V~~L~GG~~~W~~~g~p 138 (152)
T 1t3k_A 104 RRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKP 138 (152)
T ss_dssp HHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCS
T ss_pred HHHHHHHHHHHHhcCCCcEEEEcCCHHHHHHcCCc
Confidence 88854 7999999999999999987554
No 33
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=99.83 E-value=7.8e-22 Score=154.70 Aligned_cols=97 Identities=22% Similarity=0.283 Sum_probs=76.8
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecCChHHHHhhCCCCceecccccccCC-----------------------------
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSW----------------------------- 236 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~~~----------------------------- 236 (296)
..++.+++.+ . ++..+||||++.||..||||||+|||+..+...
T Consensus 5 ~~i~~~el~~---~----~~~~iiDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (134)
T 3g5j_A 5 SVIKIEKALK---L----DKVIFVDVRTEGEYEEDHILNAINMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYVSYKLKD 77 (134)
T ss_dssp CEECHHHHTT---C----TTEEEEECSCHHHHHHCCCTTCEECCSSCHHHHHHHHHHHHHHCHHHHHHHHHHHHGGGHHH
T ss_pred cccCHHHHHh---c----CCcEEEEcCCHHHHhcCCCCCCEEcCccchhhhhcccceeeecChhHHHhcccccccccHHH
Confidence 4466666643 2 478999999999999999999999999653210
Q ss_pred CCCccCCCCCC-CcEEEEe-CCChhHHHHHHHHHHcCCCceEEccchHHHhhhccC
Q 022496 237 GPDITVKFDPQ-KDTYVMC-HHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYATKVD 290 (296)
Q Consensus 237 ~~~~~~~~~~~-~~iv~~C-~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~~~ 290 (296)
.......++++ ++||+|| .+|.||..+++.|+.+|| ||++|+|||.+|.+.+.
T Consensus 78 ~~~~~~~~~~~~~~ivvyC~~~G~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~~~ 132 (134)
T 3g5j_A 78 IYLQAAELALNYDNIVIYCARGGMRSGSIVNLLSSLGV-NVYQLEGGYKAYRNFVL 132 (134)
T ss_dssp HHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHHHTTC-CCEEETTHHHHHHHHHT
T ss_pred HHHHHHHhccCCCeEEEEECCCChHHHHHHHHHHHcCC-ceEEEeCcHHHHHHHhh
Confidence 00011234677 9999999 599999999999999999 99999999999997653
No 34
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.83 E-value=1.1e-20 Score=168.52 Aligned_cols=105 Identities=18% Similarity=0.193 Sum_probs=90.0
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecCChHHH-----------HhhCCCCceecccccccCCCCCccC-----------C
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEV-----------ALSSLPGFQVLPLRQFGSWGPDITV-----------K 243 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR~~~ey-----------~~ghIpgA~~ip~~~l~~~~~~~~~-----------~ 243 (296)
..++.+++.+.+.+ ++..+||||++.|| ..||||||+|||+.++.+..+.+.. .
T Consensus 175 ~~i~~~e~~~~~~~----~~~~liDvR~~~ef~G~~~~p~~~~~~GhIpGAiniP~~~l~~~~~~~~~~~~l~~~~~~~~ 250 (302)
T 3olh_A 175 FIKTYEDIKENLES----RRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSQEGLEKSPEEIRHLFQEKK 250 (302)
T ss_dssp GEECHHHHHHHHHH----CCSEEEECSCHHHHHTSSCCSSTTCCCCCCTTCEECCGGGGBCSSSCBCCHHHHHHHHHHTT
T ss_pred ceecHHHHHHhhcC----CCcEEEecCCHHHccccccCCCcCCcCccCCCceecCHHHhcCCCCccCCHHHHHHHHHhcC
Confidence 34778888888865 36799999999999 7899999999999998764332211 4
Q ss_pred CCCCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccchHHHhhhccCCCCC
Q 022496 244 FDPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDPSIP 294 (296)
Q Consensus 244 ~~~~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~~~~~~~ 294 (296)
++++++||+||++|.||..++..|+.+||+||++|+|||.+|.....|.+.
T Consensus 251 ~~~~~~iv~yC~sG~rs~~a~~~L~~~G~~~v~~~~Gg~~~W~~~~~P~~~ 301 (302)
T 3olh_A 251 VDLSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEWYMRARPEDV 301 (302)
T ss_dssp CCTTSCEEEECSSSSTTHHHHHHHHTTTCCCCCEESSHHHHHHHHHCCCC-
T ss_pred CCCCCCEEEECCChHHHHHHHHHHHHcCCCCeeEeCCcHHHHhhccCCCCC
Confidence 688999999999999999999999999999999999999999999988764
No 35
>1yw5_A Peptidyl prolyl CIS/trans isomerase; WW-domain, ppiase domain, ordered linker; 1.60A {Candida albicans}
Probab=99.83 E-value=1.1e-20 Score=155.37 Aligned_cols=91 Identities=38% Similarity=0.612 Sum_probs=81.5
Q ss_pred CCceEEEeeEeeccc--------------------hHHHHHHHHHHHhcCCc-cHHHHHHhhCCCCcccCCcccccccCC
Q 022496 86 GDREILVQHLLVKED--------------------DLNLLSELQRRVSQGRE-DLSDLAVEHSICPSKGEGGMLGWVRKG 144 (296)
Q Consensus 86 ~~~~~~~~~Il~~~~--------------------~~~~a~~i~~~l~~~g~-~F~~la~~~S~d~~~~~gG~lg~~~~~ 144 (296)
.+++++++|||++.+ +++.+++|+++|+ +|. +|++||++||+|+++.+||+|||+..+
T Consensus 64 ~~~~~~~~hIlv~~~~~~~p~~~~~~~~~~~~~~~A~~~~~~i~~~l~-~G~~~F~~lA~~~S~~~sa~~GGdLG~~~~~ 142 (177)
T 1yw5_A 64 EDGQVRVSHLLIKNNQSRKPKSWKSPDGISRTRDESIQILKKHLERIL-SGEVKLSELANTESDCSSHDRGGDLGFFSKG 142 (177)
T ss_dssp TTSCEEEEEEEECCTTSSSCCBTTBTTCCCCCHHHHHHHHHHHHHHHH-HTSSCHHHHHHHHCCSGGGGGTTEEEEECTT
T ss_pred CcceEEEEEEEEecCCccCcccccccccchhHHHHHHHHHHHHHHHHH-cCchhHHHHHHHhCCCcchhcCCccceeccc
Confidence 457899999999741 3445678889996 776 899999999999999999999999999
Q ss_pred CCcHHHHHHHhcCCCCcee-ceeecCcceEEEee
Q 022496 145 QLVPEFEEVAFTTPLNKVA-RCKTKFGWHLLQVL 177 (296)
Q Consensus 145 ~l~~~~~~~~~~l~~G~vs-pv~~~~G~~Ii~v~ 177 (296)
+|+++|.+++|.|++|++| ||+|++|||||++.
T Consensus 143 ~l~~~f~~a~f~L~~GeiS~pv~t~~G~hIikv~ 176 (177)
T 1yw5_A 143 QMQPPFEEAAFNLHVGEVSNIIETNSGVHILQRT 176 (177)
T ss_dssp SSCHHHHHHHHTSCTTCBCCCEEETTEEEEEEEC
T ss_pred ccCHHHHHHHHcCCCCCcCCeEEECCEEEEEEEe
Confidence 9999999999999999999 89999999999985
No 36
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=99.83 E-value=3.6e-21 Score=167.27 Aligned_cols=103 Identities=21% Similarity=0.398 Sum_probs=88.7
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecCChHHHHhhCCCCceecccccccCCCCCccC--CCCCCCcEEEEeCCChhHHHH
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITV--KFDPQKDTYVMCHHGMRSLQV 263 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~--~~~~~~~iv~~C~~G~rs~~a 263 (296)
..++++++.+++.+ ++.++||||++.||..||||||+|+|+..+.+....+.. ..+++++||+||.+|.||..+
T Consensus 122 ~~Is~~el~~ll~~----~~~vlIDVR~~~Ey~~GHIpGAiniP~~~~~~~~~~l~~~l~~~kdk~IVvyC~~G~RS~~A 197 (265)
T 4f67_A 122 TYLSPEEWHQFIQD----PNVILLDTRNDYEYELGTFKNAINPDIENFREFPDYVQRNLIDKKDKKIAMFCTGGIRCEKT 197 (265)
T ss_dssp CEECHHHHHHHTTC----TTSEEEECSCHHHHHHEEETTCBCCCCSSGGGHHHHHHHHTGGGTTSCEEEECSSSHHHHHH
T ss_pred ceECHHHHHHHhcC----CCeEEEEeCCchHhhcCcCCCCEeCCHHHHHhhHHHHHHhhhhCCCCeEEEEeCCChHHHHH
Confidence 56889999999876 378999999999999999999999999987653221111 126899999999999999999
Q ss_pred HHHHHHcCCCceEEccchHHHhhhccCCC
Q 022496 264 AQWLQTQGFRRVFNVSGGIHAYATKVDPS 292 (296)
Q Consensus 264 a~~L~~~G~~~v~~l~GG~~~W~~~~~~~ 292 (296)
+..|+.+||+||++|+|||.+|.++.++.
T Consensus 198 a~~L~~~Gf~nV~~L~GGi~aW~~~~~~~ 226 (265)
T 4f67_A 198 TAYMKELGFEHVYQLHDGILNYLESIPES 226 (265)
T ss_dssp HHHHHHHTCSSEEEETTHHHHHHHHSCTT
T ss_pred HHHHHHcCCCCEEEecCHHHHHHHhcCcc
Confidence 99999999999999999999999988765
No 37
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=99.80 E-value=1.4e-20 Score=150.49 Aligned_cols=98 Identities=19% Similarity=0.241 Sum_probs=75.6
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecCChHHHHh-hCC------CCceecccccccCC-----CCCcc-----CCCCCCC
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVAL-SSL------PGFQVLPLRQFGSW-----GPDIT-----VKFDPQK 248 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR~~~ey~~-ghI------pgA~~ip~~~l~~~-----~~~~~-----~~~~~~~ 248 (296)
..++++++.+.+.++ ++.++||||++.||.. ||| |||+|||+..+... ...+. ..+++++
T Consensus 5 ~~is~~el~~~l~~~---~~~~liDVR~~~e~~~~ghi~~~g~~pgAv~ip~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 81 (148)
T 2fsx_A 5 GDITPLQAWEMLSDN---PRAVLVDVRCEAEWRFVGVPDLSSLGREVVYVEWATSDGTHNDNFLAELRDRIPADADQHER 81 (148)
T ss_dssp EEECHHHHHHHHHHC---TTCEEEECSCHHHHHHTCEECCGGGTCCCEECCSBCTTSCBCTTHHHHHHHHCC-------C
T ss_pred ccCCHHHHHHHHhcC---CCeEEEECCCHHHHHhcCCCccccCCCCcEEeeeeccccccCHHHHHHHHHHHhhccCCCCC
Confidence 357888998888742 3689999999999997 999 99999999872110 00111 1247899
Q ss_pred cEEEEeCCChhHHHHHHHHHHcCCCceEEccchHHHhh
Q 022496 249 DTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYA 286 (296)
Q Consensus 249 ~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~ 286 (296)
+|||||.+|.||..++..|+.+||+||++|+|||.+|.
T Consensus 82 ~ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~w~ 119 (148)
T 2fsx_A 82 PVIFLCRSGNRSIGAAEVATEAGITPAYNVLDGFEGHL 119 (148)
T ss_dssp CEEEECSSSSTHHHHHHHHHHTTCCSEEEETTTTTCCC
T ss_pred EEEEEcCCChhHHHHHHHHHHcCCcceEEEcCChhhhh
Confidence 99999999999999999999999999999999996554
No 38
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=99.79 E-value=6.9e-20 Score=148.44 Aligned_cols=107 Identities=17% Similarity=0.227 Sum_probs=83.8
Q ss_pred hcCCCHHHHHHHhcCCCC--CCCcEEEecCChHHHHhhCCCCceecccccccCCC-CCccCCCCCCCcE--EEEeC-CCh
Q 022496 185 LQDIQPDELHKKMQDPNF--HKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWG-PDITVKFDPQKDT--YVMCH-HGM 258 (296)
Q Consensus 185 ~~~is~~ev~~~L~~~~~--~~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~~~~-~~~~~~~~~~~~i--v~~C~-~G~ 258 (296)
...++.+++.+++.++.- .++..+||||++.||..||||||+|||+..+.... .......+++++| |+||. +|.
T Consensus 22 ~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~~~~~~~~~~~~~~~~~~~ivvv~yC~~sg~ 101 (161)
T 1c25_A 22 LKYISPEIMASVLNGKFANLIKEFVIIDCRYPYEYEGGHIKGAVNLHMEEEVEDFLLKKPIVPTDGKRVIVVFHCEFSSE 101 (161)
T ss_dssp SCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHHHTTTSCCCCCTTSEEEEEEECSSSSS
T ss_pred cceeCHHHHHHHHhccccccCCCeEEEECCChHHccCCcccCcEeCChhHHHHHHHhhhhhccCCCCCeEEEEEcCCCCc
Confidence 356889999998875210 02678999999999999999999999998764321 1111112577886 67899 999
Q ss_pred hHHHHHHHHHHc----------CCCceEEccchHHHhhhccCC
Q 022496 259 RSLQVAQWLQTQ----------GFRRVFNVSGGIHAYATKVDP 291 (296)
Q Consensus 259 rs~~aa~~L~~~----------G~~~v~~l~GG~~~W~~~~~~ 291 (296)
||..++..|++. ||+||++|+||+.+|..+..|
T Consensus 102 rs~~aa~~L~~~~~~~~~l~~~G~~~v~~l~GG~~~W~~~~~~ 144 (161)
T 1c25_A 102 RGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQS 144 (161)
T ss_dssp HHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHGG
T ss_pred chHHHHHHHHHHHHhhhhccccCCceEEEEcCCHHHHHHHccc
Confidence 999999999864 999999999999999987654
No 39
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.79 E-value=3.1e-19 Score=156.54 Aligned_cols=99 Identities=18% Similarity=0.223 Sum_probs=84.8
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecCChHHHH--------hhCCCCceecccccccCCCC------C---ccC--CCCC
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVA--------LSSLPGFQVLPLRQFGSWGP------D---ITV--KFDP 246 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR~~~ey~--------~ghIpgA~~ip~~~l~~~~~------~---~~~--~~~~ 246 (296)
..++.+++.+.+.++ +..+||||++.||. .||||||+|+|+..+.+... . +.. .+++
T Consensus 147 ~~i~~~~l~~~l~~~----~~~liDvR~~~e~~g~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 222 (271)
T 1e0c_A 147 PTASRDYLLGRLGAA----DLAIWDARSPQEYRGEKVLAAKGGHIPGAVNFEWTAAMDPSRALRIRTDIAGRLEELGITP 222 (271)
T ss_dssp TBCCHHHHHHHTTCT----TEEEEECSCHHHHTTSSCCSSSCSBCTTCEECCGGGGEEGGGTTEECTTHHHHHHHTTCCT
T ss_pred ccccHHHHHHHhcCC----CcEEEEcCChhhcCCccCCCCcCCcCCCceeccHHHhCCCCCCCCCHHHHHHHHHHcCCCC
Confidence 347888898888763 68899999999999 89999999999998764311 0 112 4689
Q ss_pred CCcEEEEeCCChhHHHHHHHHHHcCCCceEEccchHHHhhhc
Q 022496 247 QKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYATK 288 (296)
Q Consensus 247 ~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~ 288 (296)
+++||+||.+|.||..++..|+.+||+||++|+|||.+|..+
T Consensus 223 ~~~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~ 264 (271)
T 1e0c_A 223 DKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNH 264 (271)
T ss_dssp TSEEEEECSSSSHHHHHHHHHHHTTCSCEEECSSHHHHHTTC
T ss_pred CCCEEEECCchHHHHHHHHHHHHcCCCCceeeCCcHHHHhcC
Confidence 999999999999999999999999999999999999999976
No 40
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=99.78 E-value=3.9e-20 Score=145.40 Aligned_cols=103 Identities=16% Similarity=0.207 Sum_probs=81.3
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecCChHHHHhh-CC------CCceecccccccC--CCCCccCC--CCCCCcEEEEe
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALS-SL------PGFQVLPLRQFGS--WGPDITVK--FDPQKDTYVMC 254 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR~~~ey~~g-hI------pgA~~ip~~~l~~--~~~~~~~~--~~~~~~iv~~C 254 (296)
..++.+++.+++.+. ++..+||||++.||..+ |+ |||+|||+..+.. ....+... ++++++|||||
T Consensus 5 ~~is~~e~~~~l~~~---~~~~liDVR~~~E~~~~~~~~~~g~~~ga~~ip~~~~~~~~~~~~l~~~~~~~~~~~ivv~C 81 (134)
T 1vee_A 5 SSGSAKNAYTKLGTD---DNAQLLDIRATADFRQVGSPNIKGLGKKAVSTVYNGEDKPGFLKKLSLKFKDPENTTLYILD 81 (134)
T ss_dssp CBCCHHHHHHHHHHC---TTEEEEECSCHHHHHHTCEECCTTTSCCCEECCCCGGGHHHHHHHHHTTCSCGGGCEEEEEC
T ss_pred CccCHHHHHHHHHhC---CCeEEEEcCCHHHHhhcCCCcccccCCceEEeecccccChhHHHHHHHHhCCCCCCEEEEEe
Confidence 458889998888632 36789999999999863 33 7999999876421 00111111 26899999999
Q ss_pred CCChhHHHHHHHHHHcCCCceEEccchH---HHhhhccCC
Q 022496 255 HHGMRSLQVAQWLQTQGFRRVFNVSGGI---HAYATKVDP 291 (296)
Q Consensus 255 ~~G~rs~~aa~~L~~~G~~~v~~l~GG~---~~W~~~~~~ 291 (296)
++|.||..++..|+.+||+||++|.||+ .+|..+..|
T Consensus 82 ~sG~RS~~aa~~L~~~G~~~v~~l~GG~~~~~~W~~~g~p 121 (134)
T 1vee_A 82 KFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWLNSSLP 121 (134)
T ss_dssp SSSTTHHHHHHHHHHHTCSEEEECTTTTTSTTSSGGGTCC
T ss_pred CCCCcHHHHHHHHHHcCCcceEEecCCccCCcchhhcCCC
Confidence 9999999999999999999999999999 789987655
No 41
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.78 E-value=3.5e-19 Score=157.04 Aligned_cols=98 Identities=17% Similarity=0.224 Sum_probs=81.3
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecCChHHH-----------HhhCCCCceecccccccCCCCC------cc-----CC
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEV-----------ALSSLPGFQVLPLRQFGSWGPD------IT-----VK 243 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR~~~ey-----------~~ghIpgA~~ip~~~l~~~~~~------~~-----~~ 243 (296)
..++.+++.+.+.++ +..+||||++.|| ..||||||+|||+.++... +. +. ..
T Consensus 152 ~~i~~~e~~~~~~~~----~~~liDvR~~~e~~G~~~~~~~~~~~ghIpgA~nip~~~~~~~-~~~~~~~~l~~~~~~~~ 226 (280)
T 1urh_A 152 AVVKVTDVLLASHEN----TAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVRE-GELKTTDELDAIFFGRG 226 (280)
T ss_dssp GBCCHHHHHHHHHHT----CSEEEECSCHHHHSSCCCC----CCSSSCTTCEECCGGGGBSS-SSBCCHHHHHHHHHTTT
T ss_pred cEEcHHHHHHHhcCC----CcEEEeCCchhhcccccCCCCCCCcCccCCCceEeeHHHhhcC-CccCCHHHHHHHHHHcC
Confidence 458889998888753 6799999999999 6899999999999988751 11 11 14
Q ss_pred CCCCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccchHHHhhhc
Q 022496 244 FDPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYATK 288 (296)
Q Consensus 244 ~~~~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~ 288 (296)
++++++||+||.+|.||..++..|+.+||+||++|+|||.+|..+
T Consensus 227 ~~~~~~ivv~C~~G~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~ 271 (280)
T 1urh_A 227 VSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGAR 271 (280)
T ss_dssp CCSSSCEEEECCSSSTHHHHHHHHHHTTCSSCEEECCSCCC----
T ss_pred CCCCCCEEEECChHHHHHHHHHHHHHcCCCCceeeCChHHHHhcC
Confidence 688999999999999999999999999999999999999999874
No 42
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.78 E-value=3.5e-19 Score=158.31 Aligned_cols=99 Identities=17% Similarity=0.166 Sum_probs=84.6
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecCChHHH------------HhhCCCCceecccccccCCCCCcc---------C--
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEV------------ALSSLPGFQVLPLRQFGSWGPDIT---------V-- 242 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR~~~ey------------~~ghIpgA~~ip~~~l~~~~~~~~---------~-- 242 (296)
..++.+++.+.+.+ ++..+||||++.|| ..||||||+|||+.++....+.+. .
T Consensus 160 ~~i~~~e~~~~~~~----~~~~liDvR~~~e~~G~~~~~~~~~~~~ghIpgA~nip~~~l~~~~~~~~~~~~l~~~~~~~ 235 (296)
T 1rhs_A 160 LLKTYEQVLENLES----KRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPEELRAMFEAK 235 (296)
T ss_dssp GEECHHHHHHHHHH----CCSEEEECSCHHHHHTSSCCSSSSSCCCCEETTCEECCGGGGBCTTSCBCCHHHHHHHHHHT
T ss_pred eEEcHHHHHHHhcC----CCceEEeCCchhhcccccCCcccCCCcCccCCCCEeecHHHhcCCCCcCCCHHHHHHHHHHc
Confidence 45888899888865 36789999999999 789999999999998865322111 1
Q ss_pred CCCCCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccchHHHhhhc
Q 022496 243 KFDPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYATK 288 (296)
Q Consensus 243 ~~~~~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~ 288 (296)
.++++++||+||.+|.||..++..|+.+||+||++|+|||.+|...
T Consensus 236 ~~~~~~~ivv~C~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~ 281 (296)
T 1rhs_A 236 KVDLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHR 281 (296)
T ss_dssp TCCTTSCEEEECSSSSTHHHHHHHHHHTTCCCCEEESSHHHHHHHH
T ss_pred CCCCCCCEEEECCcHHHHHHHHHHHHHcCCCCceeeCCcHHHHhcC
Confidence 3688999999999999999999999999999999999999999874
No 43
>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A
Probab=99.77 E-value=2.7e-19 Score=143.66 Aligned_cols=101 Identities=15% Similarity=0.161 Sum_probs=79.3
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecCChHHHHhhCCCCceecccccccCC-C--C-----Cc-----cC--CCCCCCcE
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSW-G--P-----DI-----TV--KFDPQKDT 250 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~~~-~--~-----~~-----~~--~~~~~~~i 250 (296)
..++.+++.+++++. .++..+||||++.||..||||||+|||+..+... . + .+ .. .++++++|
T Consensus 4 ~~Is~~~l~~~l~~~--~~~~~iiDvR~~~ey~~gHIpgAinip~~~l~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~i 81 (153)
T 2vsw_A 4 TQIVTERLVALLESG--TEKVLLIDSRPFVEYNTSHILEAININCSKLMKRRLQQDKVLITELIQHSAKHKVDIDCSQKV 81 (153)
T ss_dssp EEECHHHHHHHHTST--TCCEEEEECSCHHHHHHCEETTCEECCCCHHHHHHHHTTSSCHHHHHHHSCSSCCCCCTTSEE
T ss_pred ccccHHHHHHHHhcC--CCCEEEEECCCHHHhccCccCCCeeeChHHHHHhhhhcCCcCHHHhcCchhhhhhccCCCCeE
Confidence 457888999988742 1367899999999999999999999999876211 0 0 00 01 24789999
Q ss_pred EEEeCCChhHHHH------HHHHHH--cCCCceEEccchHHHhhhc
Q 022496 251 YVMCHHGMRSLQV------AQWLQT--QGFRRVFNVSGGIHAYATK 288 (296)
Q Consensus 251 v~~C~~G~rs~~a------a~~L~~--~G~~~v~~l~GG~~~W~~~ 288 (296)
||||.+|.||..+ +..|+. .||++|++|+|||.+|...
T Consensus 82 Vvyc~~g~~s~~a~~~~~~~~~L~~l~~G~~~v~~L~GG~~~W~~~ 127 (153)
T 2vsw_A 82 VVYDQSSQDVASLSSDCFLTVLLGKLEKSFNSVHLLAGGFAEFSRC 127 (153)
T ss_dssp EEECSSCCCGGGSCTTSHHHHHHHHHHHHCSCEEEETTHHHHHHHH
T ss_pred EEEeCCCCcccccccchHHHHHHHHHHhCCCcEEEEeChHHHHHHh
Confidence 9999999998766 577774 4999999999999999875
No 44
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=99.77 E-value=3.7e-19 Score=150.42 Aligned_cols=105 Identities=17% Similarity=0.237 Sum_probs=79.4
Q ss_pred hcCCCHHHHHHHhcCCCC--CCCcEEEecCChHHHHhhCCCCceeccccc-ccCCCCC-ccCCCCCCC--cEEEEeC-CC
Q 022496 185 LQDIQPDELHKKMQDPNF--HKEAQLIDVREPEEVALSSLPGFQVLPLRQ-FGSWGPD-ITVKFDPQK--DTYVMCH-HG 257 (296)
Q Consensus 185 ~~~is~~ev~~~L~~~~~--~~~~~llDvR~~~ey~~ghIpgA~~ip~~~-l~~~~~~-~~~~~~~~~--~iv~~C~-~G 257 (296)
...++++++.+++.++.. .++..+||||++.||..||||||+|||+.+ +...... -....++++ +|||||. +|
T Consensus 56 ~~~Is~~eL~~~l~~~~~~~~~~~~lIDVR~~~Ey~~GHIpGAinIP~~~~l~~~l~~~~~~~~~~~k~~~VVvyC~~SG 135 (216)
T 3op3_A 56 LKYVNPETVAALLSGKFQGLIEKFYVIDCRYPYEYLGGHIQGALNLYSQEELFNFFLKKPIVPLDTQKRIIIVFHCEFSS 135 (216)
T ss_dssp SEEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTSEETTCEECCSHHHHHHHHTSSCCCCSSTTSEEEEEEECCC--
T ss_pred CCEeCHHHHHHHHhCCCccccCCEEEEEeCcHHHHhcCCccCCEECChHHHHHHHHhhccccccccCCCCEEEEEeCCCC
Confidence 466899999999976310 025789999999999999999999999986 3221100 001123344 4999999 99
Q ss_pred hhHHHHHHHHHHc----------CCCceEEccchHHHhhhcc
Q 022496 258 MRSLQVAQWLQTQ----------GFRRVFNVSGGIHAYATKV 289 (296)
Q Consensus 258 ~rs~~aa~~L~~~----------G~~~v~~l~GG~~~W~~~~ 289 (296)
.||..++..|+.. ||++|++|+|||.+|..+.
T Consensus 136 ~Rs~~aa~~L~~~~~~~~~y~~lGf~~V~~L~GG~~aW~~~~ 177 (216)
T 3op3_A 136 ERGPRMCRCLREEDRSLNQYPALYYPELYILKGGYRDFFPEY 177 (216)
T ss_dssp CCHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTC
T ss_pred hHHHHHHHHHHHcCcccccccccCCCcEEEECCcHHHHHHhC
Confidence 9999999999987 8999999999999999753
No 45
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=99.77 E-value=1.3e-19 Score=145.48 Aligned_cols=107 Identities=17% Similarity=0.223 Sum_probs=79.8
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecCChHHHHhhCCCCceecccccccC-CCCCccCCCC-CC-CcEEEEe-CCChhHH
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGS-WGPDITVKFD-PQ-KDTYVMC-HHGMRSL 261 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~~-~~~~~~~~~~-~~-~~iv~~C-~~G~rs~ 261 (296)
..++++++.+++.+....++..+||||++ ||..||||||+|||+..+.. ....+...+. ++ +.||+|| .+|.||.
T Consensus 5 ~~Is~~el~~~l~~~~~~~~~~lIDvR~~-ey~~gHIpGAinip~~~l~~~~~~~l~~~l~~~~~~~vV~yC~~sg~rs~ 83 (152)
T 2j6p_A 5 TYIKPEELVELLDNPDSLVKAAVIDCRDS-DRDCGFIVNSINMPTISCTEEMYEKLAKTLFEEKKELAVFHCAQSLVRAP 83 (152)
T ss_dssp EEECHHHHHHHHHSHHHHHTEEEEECCST-TGGGCBCTTCEECCTTTCCHHHHHHHHHHHHHTTCCEEEEECSSSSSHHH
T ss_pred CccCHHHHHHHHhCCCCCCCEEEEEcCcH-HhCcCcCCCcEECChhHhhHHHHHHHHHHhcccCCCEEEEEcCCCCCccH
Confidence 45788888888865100015789999999 99999999999999987653 1111111111 34 4577789 7999999
Q ss_pred HHH----HHHHHcCC--CceEEccchHHHhhhccCCCC
Q 022496 262 QVA----QWLQTQGF--RRVFNVSGGIHAYATKVDPSI 293 (296)
Q Consensus 262 ~aa----~~L~~~G~--~~v~~l~GG~~~W~~~~~~~~ 293 (296)
.++ ..|+.+|| .+|++|+|||.+|.....+.+
T Consensus 84 ~aa~~~~~~L~~~G~~~~~v~~L~GG~~~W~~~g~~~~ 121 (152)
T 2j6p_A 84 KGANRFALAQKKLGYVLPAVYVLRGGWEAFYHMYGDVR 121 (152)
T ss_dssp HHHHHHHHHHHHHTCCCSEEEEETTHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHcCCCCCCEEEEcCcHHHHHHHcCCCC
Confidence 888 77888997 589999999999998877654
No 46
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.76 E-value=6.6e-19 Score=158.04 Aligned_cols=97 Identities=24% Similarity=0.279 Sum_probs=82.5
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecCChHHHHh----------------hCCCCceecccccccCCCCC---------c
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVAL----------------SSLPGFQVLPLRQFGSWGPD---------I 240 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR~~~ey~~----------------ghIpgA~~ip~~~l~~~~~~---------~ 240 (296)
..++.+++.+.+.+ . .+||||++.||.. ||||||+|||+.++.+..+. .
T Consensus 179 ~~i~~~el~~~l~~-----~-~liDvR~~~e~~~~~~~~~~~~~~~~~~~GhIpGA~niP~~~~~~~~g~~~~~~~l~~~ 252 (318)
T 3hzu_A 179 IRAFRDDVLAILGA-----Q-PLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAADESGRFRSREELERL 252 (318)
T ss_dssp TBCCHHHHHHHTTT-----S-CEEECSCHHHHHTSCSSCTTSCSCSCSSCSBCTTCEECCGGGGBCTTSCBCCHHHHHHH
T ss_pred ccccHHHHHHhhcC-----C-eEEecCCHHHhcccccCccccccccCCcCcCCCCeeecCHHHhcCCCCcCCCHHHHHHH
Confidence 34778899888864 2 8999999999998 99999999999876542221 1
Q ss_pred cCCCCCCCcEEEEeCCChhHHHHHHHHHH-cCCCceEEccchHHHhhhc
Q 022496 241 TVKFDPQKDTYVMCHHGMRSLQVAQWLQT-QGFRRVFNVSGGIHAYATK 288 (296)
Q Consensus 241 ~~~~~~~~~iv~~C~~G~rs~~aa~~L~~-~G~~~v~~l~GG~~~W~~~ 288 (296)
+..++++++||+||++|.||..++..|++ +||+||++|+|||.+|..+
T Consensus 253 ~~~l~~~~~ivvyC~sG~rs~~a~~~L~~~~G~~~v~~~~GG~~~W~~~ 301 (318)
T 3hzu_A 253 YDFINPDDQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEWGNA 301 (318)
T ss_dssp TTTCCTTCCCEEECSSSHHHHHHHHHHHHTSCCSSCEECTTHHHHHTTS
T ss_pred hcCCCCCCcEEEEcCChHHHHHHHHHHHHHcCCCCeeEeCCcHHHHhcC
Confidence 23578999999999999999999999997 9999999999999999964
No 47
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=99.76 E-value=2.8e-19 Score=151.26 Aligned_cols=106 Identities=14% Similarity=0.211 Sum_probs=83.6
Q ss_pred hcCCCHHHHHHHhcCCC--CCCCcEEEecCChHHHHhhCCCCceecccccccCC-CCCccCCC--CCCCcE--EEEeC-C
Q 022496 185 LQDIQPDELHKKMQDPN--FHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSW-GPDITVKF--DPQKDT--YVMCH-H 256 (296)
Q Consensus 185 ~~~is~~ev~~~L~~~~--~~~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~~~-~~~~~~~~--~~~~~i--v~~C~-~ 256 (296)
...++.+++.+++.++. ..++..+||||++.||..||||||+|||+..+... ... ...+ +++++| |+||. +
T Consensus 43 ~~~Is~~el~~~l~~~~~~~~~~~~lIDvR~~~Ey~~gHIpGAinip~~~l~~~~~~~-~~~l~~~~d~~ivvVvyC~~s 121 (211)
T 1qb0_A 43 LKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLERDAESFLLK-SPIAPCSLDKRVILIFHCEFS 121 (211)
T ss_dssp SCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHHHHHT-TTCCCSSTTSEEEEEEECSSS
T ss_pred CCeeCHHHHHHHHhcccccCCCCEEEEECCCHHHHccCcCCCCEECCchHHHHHhhhh-hhhccccCCCCeEEEEECCCC
Confidence 45688999999887521 01257899999999999999999999999876432 110 0123 378887 88999 9
Q ss_pred ChhHHHHHHHHHH----------cCCCceEEccchHHHhhhccCC
Q 022496 257 GMRSLQVAQWLQT----------QGFRRVFNVSGGIHAYATKVDP 291 (296)
Q Consensus 257 G~rs~~aa~~L~~----------~G~~~v~~l~GG~~~W~~~~~~ 291 (296)
|.||..++..|++ +||+||++|+|||.+|..+..+
T Consensus 122 G~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~g~~ 166 (211)
T 1qb0_A 122 SERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPN 166 (211)
T ss_dssp SSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGG
T ss_pred CccHHHHHHHHHhhhhhhhhhhhcCCCeEEEECCHHHHHHHHCcc
Confidence 9999999999986 6999999999999999876654
No 48
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=99.76 E-value=2.7e-19 Score=146.93 Aligned_cols=106 Identities=14% Similarity=0.190 Sum_probs=80.2
Q ss_pred hcCCCHHHHHHHhcCCCC--CCCcEEEecCChHHHHhhCCCCceecccccccCC-CC--CccCCCCCCCcEEE--EeC-C
Q 022496 185 LQDIQPDELHKKMQDPNF--HKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSW-GP--DITVKFDPQKDTYV--MCH-H 256 (296)
Q Consensus 185 ~~~is~~ev~~~L~~~~~--~~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~~~-~~--~~~~~~~~~~~iv~--~C~-~ 256 (296)
...++.+++.+.+.++.- .++..+||||++.||..||||||+|||+..+... .. .+. ..+++++||| ||. +
T Consensus 23 ~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~ey~~ghIpgAinip~~~l~~~~~~~~~~~-~~~~~~~ivvv~yC~~~ 101 (175)
T 2a2k_A 23 LKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLERDAESFLLKSPIA-PCSLDKRVILIFHSEFS 101 (175)
T ss_dssp SCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHHHHHSSCCC-C----CEEEEEEECSSS
T ss_pred CceeCHHHHHHHHhcccccCCCCEEEEECCCHHHHcCCcCCCcEECChhHHHHHhhhhhhhc-cccCCCCeEEEEECCCC
Confidence 356889999998875210 0257899999999999999999999999876432 10 111 1237888855 699 9
Q ss_pred ChhHHHHHHHHHH----------cCCCceEEccchHHHhhhccCC
Q 022496 257 GMRSLQVAQWLQT----------QGFRRVFNVSGGIHAYATKVDP 291 (296)
Q Consensus 257 G~rs~~aa~~L~~----------~G~~~v~~l~GG~~~W~~~~~~ 291 (296)
|.||..++..|++ +||+||++|+||+.+|..+..|
T Consensus 102 g~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~~~~ 146 (175)
T 2a2k_A 102 SERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPN 146 (175)
T ss_dssp SSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGG
T ss_pred CCccHHHHHHHHHhhhhhhhhhhcCCceEEEEcCCHHHHHHHCcc
Confidence 9999999999986 4999999999999999977654
No 49
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.76 E-value=1e-18 Score=153.19 Aligned_cols=101 Identities=20% Similarity=0.278 Sum_probs=85.2
Q ss_pred CCCHHHHHHHhcCCCCCCCcEEEecCChHHHHhhCCCCceecccccccCCCCCc-------------cC--CCCCCCcEE
Q 022496 187 DIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDI-------------TV--KFDPQKDTY 251 (296)
Q Consensus 187 ~is~~ev~~~L~~~~~~~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~-------------~~--~~~~~~~iv 251 (296)
.++++++.+.+.+ ++.++||||++.||..||||||+|+|+..+....... .. .++++++||
T Consensus 10 ~is~~~l~~~l~~----~~~~iiDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~vv 85 (271)
T 1e0c_A 10 VIEPADLQARLSA----PELILVDLTSAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGELGHRPEAVYV 85 (271)
T ss_dssp EECHHHHHTTTTC----TTEEEEECSCHHHHHHCBSTTCEECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHTCCTTCEEE
T ss_pred eeeHHHHHHhccC----CCeEEEEcCCcchhhhCcCCCCEECCHHHhccCCCCCCCCCCCHHHHHHHHHHcCCCCCCeEE
Confidence 5788888888864 3679999999999999999999999999876531110 11 257899999
Q ss_pred EEeCCCh-hHHHHHHHHHHcCCCceEEccchHHHhhhccCC
Q 022496 252 VMCHHGM-RSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDP 291 (296)
Q Consensus 252 ~~C~~G~-rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~~~~ 291 (296)
|||.+|. +|..+++.|+.+||+||++|+||+.+|..+..|
T Consensus 86 vyc~~g~~~s~~a~~~L~~~G~~~v~~L~GG~~~w~~~g~p 126 (271)
T 1e0c_A 86 VYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRP 126 (271)
T ss_dssp EECSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCC
T ss_pred EEcCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHcCCC
Confidence 9999998 999999999999999999999999999876554
No 50
>3rfw_A Cell-binding factor 2; SURA-like, chaperone; 2.20A {Campylobacter jejuni}
Probab=99.75 E-value=1.5e-18 Score=150.82 Aligned_cols=108 Identities=27% Similarity=0.502 Sum_probs=91.5
Q ss_pred CCceEEEeeEeeccchHHHHHHHHHHHhc-CC----ccHHHHHHhhCCCC-cccCCcccccccCCCCcHHHHHHHhcCCC
Q 022496 86 GDREILVQHLLVKEDDLNLLSELQRRVSQ-GR----EDLSDLAVEHSICP-SKGEGGMLGWVRKGQLVPEFEEVAFTTPL 159 (296)
Q Consensus 86 ~~~~~~~~~Il~~~~~~~~a~~i~~~l~~-~g----~~F~~la~~~S~d~-~~~~gG~lg~~~~~~l~~~~~~~~~~l~~ 159 (296)
.+++++++||+++.++ .|++++++|+. .| .+|+++|++||.|+ ++.+||++||++.++++|+|.++++.|++
T Consensus 109 ~~~~~~~~~I~~~~~~--~A~~~~~~l~~~~g~~~~~~F~~lA~~~S~~~~~~~~gGdlg~~~~~~l~~~f~~a~~~l~~ 186 (252)
T 3rfw_A 109 KPARVQAKHILVATEK--EAKDIINELKGLKGKELDAKFSELAKEKSIDPGSKNQGGELGWFDQSTMVKPFTDAAFALKN 186 (252)
T ss_dssp ECCEEEEEEEEESSHH--HHHHHHHHHTTCCHHHHHHHHHHHHHHHCCCTTTGGGTTEEEEECSSSSCHHHHHHHHHSCT
T ss_pred ccceEEEEEEEeCCHH--HHHHHHHHHHhhcCCCccccHHHHHHHhCCCCchhhcCCcccccccccccHHHHHHHHcCCC
Confidence 3479999999999654 49999999952 34 59999999999998 45669999999999999999999999999
Q ss_pred Ccee--ceeecCcceEEEeehhhhhhhhcCCCHHHHHHHhc
Q 022496 160 NKVA--RCKTKFGWHLLQVLSEREASLLQDIQPDELHKKMQ 198 (296)
Q Consensus 160 G~vs--pv~~~~G~~Ii~v~~~~~~~~~~~is~~ev~~~L~ 198 (296)
|++| |++|++||||+++.++++. ...+.++++..+.
T Consensus 187 G~is~~pv~t~~G~hii~v~~~~~~---~~~~~e~vk~~I~ 224 (252)
T 3rfw_A 187 GTITTTPVKTNFGYHVILKENSQAK---GQIKFDEVKQGIE 224 (252)
T ss_dssp TEECSSCEEETTEEEEEEEEEEECC---EECCHHHHHHHHH
T ss_pred CCccCceEEECCEEEEEEEEEecCC---CCCCHHHHHHHHH
Confidence 9999 6999999999999998765 3355666665554
No 51
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.75 E-value=3.5e-18 Score=150.59 Aligned_cols=102 Identities=19% Similarity=0.214 Sum_probs=84.5
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecC----------ChHHHHhhCCCCceecccccccCCCCC-------------ccC
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVR----------EPEEVALSSLPGFQVLPLRQFGSWGPD-------------ITV 242 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR----------~~~ey~~ghIpgA~~ip~~~l~~~~~~-------------~~~ 242 (296)
..++.+++.+.+.+ ++.++||+| ++.||..||||||+|+|+..+...... ...
T Consensus 4 ~~is~~~l~~~l~~----~~~~iiDvR~~~~~~~~~~~~~e~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~ 79 (280)
T 1urh_A 4 WFVGADWLAEHIDD----PEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMR 79 (280)
T ss_dssp CEECHHHHHTTTTC----TTEEEEECCCCCSSCTTCCHHHHHHHSBCTTCEECCGGGGSCSSSSSSSCCCCHHHHHHHHH
T ss_pred ceeeHHHHHHhcCC----CCeEEEEeeccCCcccccchhhhhhhCcCCCCEECCHHHhcCCCCCCCCCCCCHHHHHHHHH
Confidence 34788888888865 378999999 778999999999999999887543211 011
Q ss_pred --CCCCCCcEEEEeCCChh-HHHHHHHHHHcCCCceEEccchHHHhhhccCC
Q 022496 243 --KFDPQKDTYVMCHHGMR-SLQVAQWLQTQGFRRVFNVSGGIHAYATKVDP 291 (296)
Q Consensus 243 --~~~~~~~iv~~C~~G~r-s~~aa~~L~~~G~~~v~~l~GG~~~W~~~~~~ 291 (296)
.++++++|||||.+|.| |..+++.|+.+||+||++|+||+.+|..+..|
T Consensus 80 ~~gi~~~~~ivvyc~~g~~~a~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p 131 (280)
T 1urh_A 80 ELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLL 131 (280)
T ss_dssp HTTCCTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCC
T ss_pred HcCCCCCCeEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHHCCCc
Confidence 25789999999999998 99999999999999999999999999876544
No 52
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.75 E-value=2.5e-18 Score=154.07 Aligned_cols=106 Identities=20% Similarity=0.296 Sum_probs=87.8
Q ss_pred CCCHHHHHHHhcCCCCCCCcEEEecCChHHHH-----------hhCCCCceecccccccCCCCCcc--------------
Q 022496 187 DIQPDELHKKMQDPNFHKEAQLIDVREPEEVA-----------LSSLPGFQVLPLRQFGSWGPDIT-------------- 241 (296)
Q Consensus 187 ~is~~ev~~~L~~~~~~~~~~llDvR~~~ey~-----------~ghIpgA~~ip~~~l~~~~~~~~-------------- 241 (296)
.++.+++.+.+.+....++..+||+|++.+|. .||||||+|+|+.++.+..+.+.
T Consensus 185 v~~~~~v~~~v~~~~~~~~~~lvDaRs~~rf~G~~~ep~~~~r~GHIPGA~nlP~~~~ld~~~~~~~~~~e~l~~~l~~~ 264 (327)
T 3utn_X 185 IVDYEEMFQLVKSGELAKKFNAFDARSLGRFEGTEPEPRSDIPSGHIPGTQPLPYGSLLDPETKTYPEAGEAIHATLEKA 264 (327)
T ss_dssp EECHHHHHHHHHTTCHHHHCEEEECSCHHHHHTSSCCSSSSCCCCBCTTEEECCGGGGSCTTTCCCCCTTHHHHHHHHHH
T ss_pred eecHHHHhhhhhcccccccceeeccCccceecccccCccccccCCCCCCCcccChhhccCCCCCCCCCcHHHHHHHHHHH
Confidence 36677888888765333457899999999996 49999999999998875432211
Q ss_pred -----CCCCCCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccchHHHhhhccCCC
Q 022496 242 -----VKFDPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDPS 292 (296)
Q Consensus 242 -----~~~~~~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~~~~~ 292 (296)
..++++++||+||++|.+|+..+..|..+||+||++|+|+|.+|....+|.
T Consensus 265 ~~~~~~gid~~k~vI~yCgsGvtA~~~~laL~~lG~~~v~lYdGSWsEW~~r~~pe 320 (327)
T 3utn_X 265 LKDFHCTLDPSKPTICSCGTGVSGVIIKTALELAGVPNVRLYDGSWTEWVLKSGPE 320 (327)
T ss_dssp HHHTTCCCCTTSCEEEECSSSHHHHHHHHHHHHTTCCSEEEESSHHHHHHHHHCGG
T ss_pred HHHhhcCCCCCCCEEEECChHHHHHHHHHHHHHcCCCCceeCCCcHHHhccccCCc
Confidence 246789999999999999999999999999999999999999999877764
No 53
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.75 E-value=3.2e-18 Score=146.65 Aligned_cols=92 Identities=30% Similarity=0.433 Sum_probs=78.9
Q ss_pred CCCHHHHHHHhcCCCCCCCcEEEecCChHHHHh----------hCCCCceecccccccCCCCCccC--CCCCCCcEEEEe
Q 022496 187 DIQPDELHKKMQDPNFHKEAQLIDVREPEEVAL----------SSLPGFQVLPLRQFGSWGPDITV--KFDPQKDTYVMC 254 (296)
Q Consensus 187 ~is~~ev~~~L~~~~~~~~~~llDvR~~~ey~~----------ghIpgA~~ip~~~l~~~~~~~~~--~~~~~~~iv~~C 254 (296)
.++.+++.+ +..+||+|++.||.. ||||||+|+|+.++.... ++.. .++++++||+||
T Consensus 122 ~i~~~e~~~---------~~~liDvR~~~e~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~-e~~~~~~~~~~~~iv~~C 191 (230)
T 2eg4_A 122 LLTADEAAR---------HPLLLDVRSPEEFQGKVHPPCCPRGGRIPGSKNAPLELFLSPE-GLLERLGLQPGQEVGVYC 191 (230)
T ss_dssp BCCHHHHHT---------CSCEEECSCHHHHTTSCCCTTSSSCCBCTTCEECCGGGGGCCT-THHHHHTCCTTCEEEEEC
T ss_pred eeCHHHHhh---------CCeEEeCCCHHHcCcccCCCCCccCCCCCCcEEcCHHHhCChH-HHHHhcCCCCCCCEEEEc
Confidence 467777654 357999999999999 999999999999986542 1222 468899999999
Q ss_pred CCChhHHHHHHHHHHcCCCceEEccchHHHhhhcc
Q 022496 255 HHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYATKV 289 (296)
Q Consensus 255 ~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~~ 289 (296)
++|.||..++..|+.+| .||++|+|||.+|..+.
T Consensus 192 ~~G~rs~~a~~~L~~~G-~~v~~~~Gg~~~W~~~g 225 (230)
T 2eg4_A 192 HSGARSAVAFFVLRSLG-VRARNYLGSMHEWLQEG 225 (230)
T ss_dssp SSSHHHHHHHHHHHHTT-CEEEECSSHHHHHHHTT
T ss_pred CChHHHHHHHHHHHHcC-CCcEEecCcHHHHhhcC
Confidence 99999999999999999 89999999999999873
No 54
>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}
Probab=99.74 E-value=5e-19 Score=139.91 Aligned_cols=103 Identities=22% Similarity=0.214 Sum_probs=73.9
Q ss_pred CCHHHHHHHhcCC---CC-CCCcEEEecCChHHHHhhCCCCceecccccccCC--C--CCcc--C------CCC-----C
Q 022496 188 IQPDELHKKMQDP---NF-HKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSW--G--PDIT--V------KFD-----P 246 (296)
Q Consensus 188 is~~ev~~~L~~~---~~-~~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~~~--~--~~~~--~------~~~-----~ 246 (296)
++++++.+.+... .+ +++..+||||++.||..||||||+|+|+..+... . .... . ... +
T Consensus 3 Is~~~l~~~l~~~~~~~l~~~~~~iiDvR~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (142)
T 2ouc_A 3 IYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKDSFKRIF 82 (142)
T ss_dssp ECHHHHHHHHHC----------CEEEECSCHHHHHHEEETTCEECCCSSHHHHHHHHTTSSCHHHHHHTTSCTTHHHHHH
T ss_pred cCHHHHHHHHHhcccccCCCCCCEEEEeCCHHHhhhhhccCccccCccHHHHHHHhhcCCcchhhhCCChhhhHHHhccC
Confidence 5677777733321 01 1367899999999999999999999999875321 0 1110 0 000 2
Q ss_pred CCcEEEEeCCChhH---------HHHHHHHHHcCCCceEEccchHHHhhhccCC
Q 022496 247 QKDTYVMCHHGMRS---------LQVAQWLQTQGFRRVFNVSGGIHAYATKVDP 291 (296)
Q Consensus 247 ~~~iv~~C~~G~rs---------~~aa~~L~~~G~~~v~~l~GG~~~W~~~~~~ 291 (296)
+++||+||.+|.+| ..++..|...|| +|++|+|||.+|.....+
T Consensus 83 ~~~ivvyc~~g~~~~~~~~~~~~~~~~~~L~~~G~-~v~~l~GG~~~w~~~g~~ 135 (142)
T 2ouc_A 83 SKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNHEN 135 (142)
T ss_dssp HSCEEEECSSCCCGGGCCTTSHHHHHHHHHHHTTC-CCEEETTHHHHHTTTCGG
T ss_pred CCcEEEEECCCCchhhcCcccHHHHHHHHHHHcCC-cEEEEccCHHHHHHHCHH
Confidence 78999999999885 567888999999 999999999999876543
No 55
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.74 E-value=3.2e-18 Score=161.72 Aligned_cols=98 Identities=29% Similarity=0.433 Sum_probs=87.3
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecCChHHHHhhCCCCceecccccccCCCCCccCCCCCCCcEEEEeCCChhHHHHHH
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQ 265 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~iv~~C~~G~rs~~aa~ 265 (296)
..++.+++.+.+.+ ++..+||+|++.||..||||||+|+|+..+... ...++++++||+||.+|.||..++.
T Consensus 374 ~~i~~~~l~~~~~~----~~~~lvDvR~~~e~~~ghIpgA~~ip~~~l~~~----~~~l~~~~~vvv~C~~G~ra~~a~~ 445 (474)
T 3tp9_A 374 ANVSPDEVRGALAQ----QGLWLLDVRNVDEWAGGHLPQAHHIPLSKLAAH----IHDVPRDGSVCVYCRTGGRSAIAAS 445 (474)
T ss_dssp EEECHHHHHHTTTT----TCCEEEECSCHHHHHHCBCTTCEECCHHHHTTT----GGGSCSSSCEEEECSSSHHHHHHHH
T ss_pred cccCHHHHHHHhcC----CCcEEEECCCHHHHhcCcCCCCEECCHHHHHHH----HhcCCCCCEEEEECCCCHHHHHHHH
Confidence 45788888888865 378999999999999999999999999998764 3456899999999999999999999
Q ss_pred HHHHcCCCceEEccchHHHhhhccCC
Q 022496 266 WLQTQGFRRVFNVSGGIHAYATKVDP 291 (296)
Q Consensus 266 ~L~~~G~~~v~~l~GG~~~W~~~~~~ 291 (296)
.|+.+||+||++|+|||.+|..+..|
T Consensus 446 ~L~~~G~~~v~~~~Gg~~~W~~~g~p 471 (474)
T 3tp9_A 446 LLRAHGVGDVRNMVGGYEAWRGKGFP 471 (474)
T ss_dssp HHHHHTCSSEEEETTHHHHHHHTTCC
T ss_pred HHHHcCCCCEEEecChHHHHHhCCCC
Confidence 99999999999999999999987433
No 56
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.74 E-value=5.2e-18 Score=149.19 Aligned_cols=94 Identities=27% Similarity=0.367 Sum_probs=78.7
Q ss_pred CCHHHHHHHhcCCCCCCCcEEEecCChHHHHh----------------hCCCCceecccccccCCCCCc---------cC
Q 022496 188 IQPDELHKKMQDPNFHKEAQLIDVREPEEVAL----------------SSLPGFQVLPLRQFGSWGPDI---------TV 242 (296)
Q Consensus 188 is~~ev~~~L~~~~~~~~~~llDvR~~~ey~~----------------ghIpgA~~ip~~~l~~~~~~~---------~~ 242 (296)
++.+++.+.+.+. + +||||++.||.. ||||||+|||+..+....+.+ ..
T Consensus 146 ~~~~el~~~~~~~----~--liDvR~~~e~~~~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~~ 219 (277)
T 3aay_A 146 AFRDEVLAAINVK----N--LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSDEELAKLYA 219 (277)
T ss_dssp ECHHHHHHTTTTS----E--EEECSCHHHHHTSCCC-----CCCCSCCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHHH
T ss_pred cCHHHHHHhcCCC----C--EEEeCChHHeeeeecccccccccccccCCcCCCceecCHHHhcCCCCcCCCHHHHHHHHH
Confidence 5678888877653 3 999999999986 999999999998764422211 11
Q ss_pred --CCCCCCcEEEEeCCChhHHHHHHHHHH-cCCCceEEccchHHHhhh
Q 022496 243 --KFDPQKDTYVMCHHGMRSLQVAQWLQT-QGFRRVFNVSGGIHAYAT 287 (296)
Q Consensus 243 --~~~~~~~iv~~C~~G~rs~~aa~~L~~-~G~~~v~~l~GG~~~W~~ 287 (296)
.++++++||+||.+|.||..++..|++ +||+||++|+|||.+|..
T Consensus 220 ~~~~~~~~~iv~yC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~ 267 (277)
T 3aay_A 220 DAGLDNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGS 267 (277)
T ss_dssp HHTCCTTSCEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTT
T ss_pred HcCCCCCCCEEEEcCcHHHHHHHHHHHHHHcCCCcceeeCchHHHHhc
Confidence 367899999999999999999999996 999999999999999987
No 57
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.74 E-value=1.2e-18 Score=156.27 Aligned_cols=102 Identities=10% Similarity=0.097 Sum_probs=82.8
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecCChHH-HHhhCCCCceeccccc-ccCCC----------CCccC--CCCCCCcEE
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVREPEE-VALSSLPGFQVLPLRQ-FGSWG----------PDITV--KFDPQKDTY 251 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR~~~e-y~~ghIpgA~~ip~~~-l~~~~----------~~~~~--~~~~~~~iv 251 (296)
..++.+++.+.+.+ ++.++||||++.| |..||||||+|+|+.. +.... ..... .++++++||
T Consensus 40 ~~is~~~l~~~l~~----~~~~iiDvR~~~e~y~~gHIpGAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~lgi~~~~~vV 115 (318)
T 3hzu_A 40 RLVTADWLSAHMGA----PGLAIVESDEDVLLYDVGHIPGAVKIDWHTDLNDPRVRDYINGEQFAELMDRKGIARDDTVV 115 (318)
T ss_dssp GEECHHHHHHHTTC----TTEEEEECCSSTTSGGGCBCTTEEECCHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEE
T ss_pred ceecHHHHHHhccC----CCEEEEECCCChhHHhcCcCCCCeEeCchhhhccCcccCCCCHHHHHHHHHHcCCCCCCeEE
Confidence 34888999998875 3689999999876 9999999999999753 21100 00011 267899999
Q ss_pred EEeCCCh-hHHHHHHHHHHcCCCceEEccchHHHhhhccCC
Q 022496 252 VMCHHGM-RSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDP 291 (296)
Q Consensus 252 ~~C~~G~-rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~~~~ 291 (296)
|||.+|. +|..+++.|+.+||+||++|+||+.+|..+..|
T Consensus 116 vyc~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p 156 (318)
T 3hzu_A 116 IYGDKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRE 156 (318)
T ss_dssp EECSGGGHHHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCC
T ss_pred EECCCCCccHHHHHHHHHHcCCCceEEccCCHHHHhhcCCC
Confidence 9999887 999999999999999999999999999987654
No 58
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.74 E-value=3.9e-18 Score=150.61 Aligned_cols=98 Identities=21% Similarity=0.311 Sum_probs=81.6
Q ss_pred cCCCHHHHHHHhc---CCCCCCCcEEEecCChHHHH----------------hhCCCCceecccccccCCCCC-------
Q 022496 186 QDIQPDELHKKMQ---DPNFHKEAQLIDVREPEEVA----------------LSSLPGFQVLPLRQFGSWGPD------- 239 (296)
Q Consensus 186 ~~is~~ev~~~L~---~~~~~~~~~llDvR~~~ey~----------------~ghIpgA~~ip~~~l~~~~~~------- 239 (296)
..++.+++.+.+. .. +..+||||++.||. .||||||+|+|+..+.+..+.
T Consensus 146 ~~i~~~el~~~l~~~~~~----~~~liDvR~~~e~~g~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l 221 (285)
T 1uar_A 146 IRAYRDDVLEHIIKVKEG----KGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPDGTFKSAEEL 221 (285)
T ss_dssp GEECHHHHHHHHHHHHTT----SEEEEECSCHHHHHTCC--------CCCSCCSBCTTCEECCGGGGBCTTSCBCCHHHH
T ss_pred eEEcHHHHHHHHhhcccC----CCcEEEcCCccceeeeccccccccccccccCCcCCCccccCHHHhcCCCCcCCCHHHH
Confidence 4588889988884 12 33699999999998 799999999999987643211
Q ss_pred --ccC--CCCCCCcEEEEeCCChhHHHHHHHHH-HcCCCceEEccchHHHhhh
Q 022496 240 --ITV--KFDPQKDTYVMCHHGMRSLQVAQWLQ-TQGFRRVFNVSGGIHAYAT 287 (296)
Q Consensus 240 --~~~--~~~~~~~iv~~C~~G~rs~~aa~~L~-~~G~~~v~~l~GG~~~W~~ 287 (296)
... +++++++|||||.+|.||..++..|+ .+||+||++|+|||.+|.+
T Consensus 222 ~~~~~~~g~~~~~~ivvyC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~ 274 (285)
T 1uar_A 222 RALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGN 274 (285)
T ss_dssp HHHHGGGTCCTTSEEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTT
T ss_pred HHHHHHcCCCCCCCEEEECCchHHHHHHHHHHHHHcCCCCcceeCchHHHHhc
Confidence 112 26889999999999999999999999 9999999999999999984
No 59
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=99.73 E-value=1e-17 Score=135.31 Aligned_cols=104 Identities=19% Similarity=0.156 Sum_probs=78.5
Q ss_pred hcCCCHHHHHHHhcCCCC----CCCcEEEecCChHHHHhhCCCCceeccccccc-----C--CCC--------CccCCC-
Q 022496 185 LQDIQPDELHKKMQDPNF----HKEAQLIDVREPEEVALSSLPGFQVLPLRQFG-----S--WGP--------DITVKF- 244 (296)
Q Consensus 185 ~~~is~~ev~~~L~~~~~----~~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~-----~--~~~--------~~~~~~- 244 (296)
...++++++.+.+..... .++..+||||++.||..||||||+|+|+..+. . ... .....+
T Consensus 10 ~~~is~~el~~~l~~~~~~~~~~~~~~liDvR~~~e~~~ghI~ga~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (158)
T 3tg1_B 10 IKIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKDSFK 89 (158)
T ss_dssp -CEECHHHHHHHHCC----------CEEEECSCHHHHHHCCBTTCEECCCSSHHHHHHHTTSSCCHHHHTCCCCSSCSST
T ss_pred CcEecHHHHHHHHHhcccccCCCCCEEEEEcCCHHHHHhCCCCCceeechhHHHHHhhhhcCcccHHhhcCCHHHHHHHh
Confidence 356889999998873100 13678999999999999999999999999863 1 110 000111
Q ss_pred -CCCCcEEEEeCCC---------hhHHHHHHHHHHcCCCceEEccchHHHhhhcc
Q 022496 245 -DPQKDTYVMCHHG---------MRSLQVAQWLQTQGFRRVFNVSGGIHAYATKV 289 (296)
Q Consensus 245 -~~~~~iv~~C~~G---------~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~~ 289 (296)
.++++|||||.+| .+|..++..|...|| +|++|+|||.+|....
T Consensus 90 ~~~~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~-~v~~L~GG~~~W~~~~ 143 (158)
T 3tg1_B 90 RIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNH 143 (158)
T ss_dssp TTTTSCEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTC-CEEEETTHHHHHTSSC
T ss_pred ccCCCeEEEEECCCCcccccCcchHHHHHHHHHHhCCC-cEEEeCCcHHHHHHHh
Confidence 2588999999999 469999999999999 7999999999998653
No 60
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=99.73 E-value=1e-19 Score=148.47 Aligned_cols=106 Identities=16% Similarity=0.230 Sum_probs=81.4
Q ss_pred hcCCCHHHHHHHhcCCC---CCCCcEEEecCChHHHHhhCCCCceecccccccCC---CCCccCCC-------CCCCcEE
Q 022496 185 LQDIQPDELHKKMQDPN---FHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSW---GPDITVKF-------DPQKDTY 251 (296)
Q Consensus 185 ~~~is~~ev~~~L~~~~---~~~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~~~---~~~~~~~~-------~~~~~iv 251 (296)
...++++++.+++.++. ..++.+|||||+ .||..||||||+|||+..|... ...+...+ ..+++||
T Consensus 30 ~~~Is~~eL~~~l~~~~~~~~~~~~~iIDVR~-~Ey~~GHIpGAiniP~~~l~~~~~~l~~l~~~~~~~~~~~~~~~~IV 108 (169)
T 3f4a_A 30 VKYLDPTELHRWMQEGHTTTLREPFQVVDVRG-SDYMGGHIKDGWHYAYSRLKQDPEYLRELKHRLLEKQADGRGALNVI 108 (169)
T ss_dssp EEEECHHHHHHHHHHTSCTTTCCCEEEEECCS-TTCTTCEETTCEECCHHHHHHCHHHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred CcEeCHHHHHHHHhcCCccCcCCCEEEEECCc-hHHccCcCCCCEECCHHHhhcccccHHHHHHHHHhhcccccCCCeEE
Confidence 35688999999987641 112588999999 8999999999999999987653 22222111 1147999
Q ss_pred EEeCCC-hhHHHHHHHHHH----cC--CCceEEccchHHHhhhccCC
Q 022496 252 VMCHHG-MRSLQVAQWLQT----QG--FRRVFNVSGGIHAYATKVDP 291 (296)
Q Consensus 252 ~~C~~G-~rs~~aa~~L~~----~G--~~~v~~l~GG~~~W~~~~~~ 291 (296)
|||.+| .||..++.+|.. .| |.+|++|+|||.+|..+..+
T Consensus 109 vyC~sG~~Rs~~aa~~l~~~L~~~G~~~~~V~~L~GG~~aW~~~~~~ 155 (169)
T 3f4a_A 109 FHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSVYGD 155 (169)
T ss_dssp EECSSSSSHHHHHHHHHHHTCCHHHHTTEEEEEETTHHHHHHHHHTT
T ss_pred EEeCCCCCcHHHHHHHHHHHHHHcCCCCCCEEEECCCHHHHHHHcCC
Confidence 999987 899999887765 36 67999999999999987664
No 61
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.72 E-value=1.9e-17 Score=147.02 Aligned_cols=106 Identities=13% Similarity=0.188 Sum_probs=84.7
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecC--------ChHHHHhhCCCCceecccccccCCCCC---cc------------C
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVR--------EPEEVALSSLPGFQVLPLRQFGSWGPD---IT------------V 242 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR--------~~~ey~~ghIpgA~~ip~~~l~~~~~~---~~------------~ 242 (296)
..++.+++.+++.++...++.++|||| ++.||..||||||+|+|+..|...... .+ .
T Consensus 8 ~~is~~~l~~~l~~~~~~~~~~liDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~l~~l 87 (296)
T 1rhs_A 8 ALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYVGSL 87 (296)
T ss_dssp SEECHHHHHHHHHTTCCBTTEEEEECCCCCTTSCCHHHHHHHSBCTTCEECCTTTSSCTTSSSSSCCCCHHHHHHHHHHT
T ss_pred ceeeHHHHHHHHhccccCCCeEEEEecccCcCCcchhhhHhhCcCCCCEEeCHHHhcCCCCCCCCCCCCHHHHHHHHHHc
Confidence 357888998888752111367899999 579999999999999999977653211 11 0
Q ss_pred CCCCCCcEEEEeCC--Chh-HHHHHHHHHHcCCCceEEccchHHHhhhccCC
Q 022496 243 KFDPQKDTYVMCHH--GMR-SLQVAQWLQTQGFRRVFNVSGGIHAYATKVDP 291 (296)
Q Consensus 243 ~~~~~~~iv~~C~~--G~r-s~~aa~~L~~~G~~~v~~l~GG~~~W~~~~~~ 291 (296)
.++++++|||||.+ |.+ |..+++.|+.+||+||++|+||+.+|..+..|
T Consensus 88 gi~~~~~vVvyc~~~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p 139 (296)
T 1rhs_A 88 GISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHP 139 (296)
T ss_dssp TCCTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCC
T ss_pred CCCCCCeEEEEcCCCCCcchHHHHHHHHHHcCCCcEEEcCCCHHHHHHcCCc
Confidence 25789999999998 876 78999999999999999999999999977654
No 62
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.72 E-value=2.2e-18 Score=152.25 Aligned_cols=102 Identities=11% Similarity=0.139 Sum_probs=82.4
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecC-ChHHHHhhCCCCceecccccccCC-C----------CCccC--CCCCCCcEE
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVR-EPEEVALSSLPGFQVLPLRQFGSW-G----------PDITV--KFDPQKDTY 251 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR-~~~ey~~ghIpgA~~ip~~~l~~~-~----------~~~~~--~~~~~~~iv 251 (296)
..++.+++.+.+.+ ++.++|||| ++.||..||||||+|+|+..+... . ..... .++++++||
T Consensus 8 ~~is~~~l~~~l~~----~~~~liDvR~~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~iv 83 (285)
T 1uar_A 8 VLVSTDWVQEHLED----PKVRVLEVDEDILLYDTGHIPGAQKIDWQRDFWDPVVRDFISEEEFAKLMERLGISNDTTVV 83 (285)
T ss_dssp GEECHHHHHTTTTC----TTEEEEEECSSTTHHHHCBCTTCEEECHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEE
T ss_pred ceEcHHHHHHhcCC----CCEEEEEcCCCcchhhcCcCCCCEECCchhhccCCcccCCCCHHHHHHHHHHcCCCCCCeEE
Confidence 35888898888865 368899999 789999999999999998742110 0 00111 257899999
Q ss_pred EEeCCCh-hHHHHHHHHHHcCCCceEEccchHHHhhhccCC
Q 022496 252 VMCHHGM-RSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDP 291 (296)
Q Consensus 252 ~~C~~G~-rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~~~~ 291 (296)
|||.+|. +|..+++.|+.+||+||++|+||+.+|..+..|
T Consensus 84 vyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p 124 (285)
T 1uar_A 84 LYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRP 124 (285)
T ss_dssp EECHHHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCC
T ss_pred EECCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCc
Confidence 9999998 799999999999999999999999999876544
No 63
>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1
Probab=99.72 E-value=5.2e-18 Score=136.24 Aligned_cols=100 Identities=12% Similarity=0.092 Sum_probs=74.9
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecCChHHHHhhCCCCceeccccccc------C--CCCCcc---------CCCCCCC
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFG------S--WGPDIT---------VKFDPQK 248 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~------~--~~~~~~---------~~~~~~~ 248 (296)
..++.+++.+.+.++ .++..+||||++.||..||||||+|||+..+. . ....++ ..+++++
T Consensus 16 ~~is~~~l~~~l~~~--~~~~~liDvR~~~ey~~gHIpgAinip~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 93 (154)
T 1hzm_A 16 ISKTVAWLNEQLELG--NERLLLMDCRPQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGEDRDRFTRRCGTD 93 (154)
T ss_dssp SBSCCCCHHHHHHHC--SSSCEEECCSTTHHHHHHTSSSCCCCCCSSHHHHTBCCSCCCTTTTSTTSHHHHHHHHSTTSS
T ss_pred cccCHHHHHHHHhCC--CCCEEEEEcCCHHHHhhccccCceEeCccHHHHhhhhcCcccHHHhCCCHHHHHHHhccCCCC
Confidence 446777777777642 12678999999999999999999999998753 1 000111 1246789
Q ss_pred cEEEEeCCChhH-------HHHHHHHHHc---CCCceEEccchHHHhhhc
Q 022496 249 DTYVMCHHGMRS-------LQVAQWLQTQ---GFRRVFNVSGGIHAYATK 288 (296)
Q Consensus 249 ~iv~~C~~G~rs-------~~aa~~L~~~---G~~~v~~l~GG~~~W~~~ 288 (296)
+|||||.+|.++ ..+++.|+.+ ||+ |++|+|||.+|...
T Consensus 94 ~iVvyc~~g~~~~~~~~aa~~~~~~l~~l~~~G~~-v~~L~GG~~~W~~~ 142 (154)
T 1hzm_A 94 TVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCR-AFYLEGGFSKFQAE 142 (154)
T ss_dssp CEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTCC-CEECCCCHHHHHHH
T ss_pred eEEEEeCCCCccccccccchHHHHHHHHHHHCCCc-eEEEcChHHHHHHH
Confidence 999999999875 3446667655 998 99999999999875
No 64
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.71 E-value=3.9e-18 Score=150.02 Aligned_cols=102 Identities=11% Similarity=0.100 Sum_probs=82.1
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecCC-hHHHHhhCCCCceecccccccCCC-----------CCccC--CCCCCCcEE
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVRE-PEEVALSSLPGFQVLPLRQFGSWG-----------PDITV--KFDPQKDTY 251 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR~-~~ey~~ghIpgA~~ip~~~l~~~~-----------~~~~~--~~~~~~~iv 251 (296)
..++.+++.+.+.+ ++.++||||+ +.||..||||||+|+|+..+.... ..... .++++++||
T Consensus 6 ~~is~~~l~~~l~~----~~~~liDvR~~~~ey~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~vv 81 (277)
T 3aay_A 6 VLVSADWAESNLHA----PKVVFVEVDEDTSAYDRDHIAGAIKLDWRTDLQDPVKRDFVDAQQFSKLLSERGIANEDTVI 81 (277)
T ss_dssp HEECHHHHHTTTTC----TTEEEEEEESSSHHHHHCBSTTCEEEETTTTTBCSSSSSBCCHHHHHHHHHHHTCCTTSEEE
T ss_pred ceEcHHHHHHHhCC----CCEEEEEcCCChhhHhhCCCCCcEEecccccccCCCCCCCCCHHHHHHHHHHcCCCCCCeEE
Confidence 34788888888865 3678999998 899999999999999987542210 00011 267899999
Q ss_pred EEeCCCh-hHHHHHHHHHHcCCCceEEccchHHHhhhccCC
Q 022496 252 VMCHHGM-RSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDP 291 (296)
Q Consensus 252 ~~C~~G~-rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~~~~ 291 (296)
|||.+|. +|..+++.|+.+||+||++|+||+.+|..+..|
T Consensus 82 vyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p 122 (277)
T 3aay_A 82 LYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRP 122 (277)
T ss_dssp EECSGGGHHHHHHHHHHHHTTCCSEEEETTHHHHHHHTTCC
T ss_pred EECCCCCchHHHHHHHHHHcCCCcEEEecCCHHHHHHcCCc
Confidence 9999875 789999999999999999999999999877554
No 65
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.71 E-value=7.1e-18 Score=161.66 Aligned_cols=102 Identities=18% Similarity=0.108 Sum_probs=87.7
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecCChHHHHhhCCCCceecccccccCCCCCccCCCCCCCcEEEEeCCChhHHHHHH
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQ 265 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~iv~~C~~G~rs~~aa~ 265 (296)
..++.+++.+.+.++ ++..+||||++.||..||||||+|||+..|......+. .+++++|||||.+|.+|..+++
T Consensus 7 ~~is~~~l~~~l~~~---~~~~liDvR~~~e~~~ghIpgAv~ip~~~~~~~~~~l~--~~~~~~iVvyc~~g~~s~~a~~ 81 (539)
T 1yt8_A 7 AVRTFHDIRAALLAR---RELALLDVREEDPFAQAHPLFAANLPLSRLELEIHARV--PRRDTPITVYDDGEGLAPVAAQ 81 (539)
T ss_dssp EEECHHHHHHHHHHT---CCBEEEECSCHHHHTTSBCTTCEECCGGGHHHHHHHHS--CCTTSCEEEECSSSSHHHHHHH
T ss_pred cccCHHHHHHHHhCC---CCeEEEECCCHHHHhcCcCCCCEECCHHHHHHHHHhhC--CCCCCeEEEEECCCChHHHHHH
Confidence 458889999888753 36899999999999999999999999998876433222 2578999999999999999999
Q ss_pred HHHHcCCCceEEccchHHHhhhccCCC
Q 022496 266 WLQTQGFRRVFNVSGGIHAYATKVDPS 292 (296)
Q Consensus 266 ~L~~~G~~~v~~l~GG~~~W~~~~~~~ 292 (296)
.|+.+||+||++|+||+.+|..+..|.
T Consensus 82 ~L~~~G~~~V~~L~GG~~~W~~~g~p~ 108 (539)
T 1yt8_A 82 RLHDLGYSDVALLDGGLSGWRNAGGEL 108 (539)
T ss_dssp HHHHTTCSSEEEETTHHHHHHHTTCCC
T ss_pred HHHHcCCCceEEeCCCHHHHHhcCCCc
Confidence 999999999999999999999876653
No 66
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.71 E-value=8.9e-18 Score=162.61 Aligned_cols=98 Identities=31% Similarity=0.544 Sum_probs=86.2
Q ss_pred hcCCCHHHHHHHhcCCCCCCCcEEEecCChHHHHhhCCCCceecccccccCCCCCccCCCCCCCcEEEEeCCChhHHHHH
Q 022496 185 LQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVA 264 (296)
Q Consensus 185 ~~~is~~ev~~~L~~~~~~~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~iv~~C~~G~rs~~aa 264 (296)
...++.+++.+++.+ +..+||||++.||..||||||+|||+..|... ...++++++||+||.+|.||..++
T Consensus 488 ~~~i~~~~~~~~~~~-----~~~~iDvR~~~e~~~ghi~ga~~ip~~~l~~~----~~~l~~~~~iv~~C~~g~rs~~a~ 558 (588)
T 3ics_A 488 VDTVQWHEIDRIVEN-----GGYLIDVREPNELKQGMIKGSINIPLDELRDR----LEEVPVDKDIYITCQLGMRGYVAA 558 (588)
T ss_dssp CCEECTTTHHHHHHT-----TCEEEECSCGGGGGGCBCTTEEECCHHHHTTC----GGGSCSSSCEEEECSSSHHHHHHH
T ss_pred cceecHHHHHHHhcC-----CCEEEEcCCHHHHhcCCCCCCEECCHHHHHHH----HhhCCCCCeEEEECCCCcHHHHHH
Confidence 456788888888853 57899999999999999999999999998764 344689999999999999999999
Q ss_pred HHHHHcCCCceEEccchHHHhhhccCCC
Q 022496 265 QWLQTQGFRRVFNVSGGIHAYATKVDPS 292 (296)
Q Consensus 265 ~~L~~~G~~~v~~l~GG~~~W~~~~~~~ 292 (296)
+.|+++||+ |++|+|||.+|..+.++.
T Consensus 559 ~~l~~~G~~-v~~l~GG~~~w~~~~~~~ 585 (588)
T 3ics_A 559 RMLMEKGYK-VKNVDGGFKLYGTVLPER 585 (588)
T ss_dssp HHHHHTTCC-EEEETTHHHHHHHHCGGG
T ss_pred HHHHHcCCc-EEEEcchHHHHHhhhhhh
Confidence 999999998 999999999999876543
No 67
>3nrk_A LIC12922; NC domain, parvulin domain, SURA homology, probable chaperon unknown function; 3.10A {Leptospira interrogans serovar copenhaorganism_taxid}
Probab=99.70 E-value=8.8e-18 Score=151.14 Aligned_cols=93 Identities=17% Similarity=0.241 Sum_probs=84.4
Q ss_pred ceEEEeeEee-cc--------chHHHHHHHHHH-HhcCCccHHHHHHhhCCCC-cccCCcccccccCCCCc---HHHHHH
Q 022496 88 REILVQHLLV-KE--------DDLNLLSELQRR-VSQGREDLSDLAVEHSICP-SKGEGGMLGWVRKGQLV---PEFEEV 153 (296)
Q Consensus 88 ~~~~~~~Il~-~~--------~~~~~a~~i~~~-l~~~g~~F~~la~~~S~d~-~~~~gG~lg~~~~~~l~---~~~~~~ 153 (296)
.+++++||++ +. .++++|++++++ ++ +|.+|+++|++||+|+ ++.+||+|||++.++++ |+|.++
T Consensus 158 ~~~~~~~Ili~~~~~~~~~~~~~~~~a~~i~~~~l~-~g~~F~~lA~~~S~d~~s~~~gG~lg~~~~~~l~~~~~~~~~a 236 (325)
T 3nrk_A 158 FEIRYRIISIAPENDSIQEENRLYKEVSEIRKSILA-DPSSFALIAGSPRNDPALRARRGMVEWISSFDLYKYSKITATI 236 (325)
T ss_dssp EEEEEEEEEECCSSSCHHHHHHHHHHHHHHHHHHHH-CTTHHHHHHHSTTSCHHHHHTTTEEEEEEHHHHHHHCHHHHHH
T ss_pred cceEEEEEEEecCCCCccchHHHHHHHHHHHHHHHh-CCCCHHHHHHHhCCCccccccCCcccccccccccccCHHHHHH
Confidence 6789999999 32 357789999999 85 8999999999999998 66999999999999999 999999
Q ss_pred HhcCCCCcee-ceeecC-cceEEEeehhhh
Q 022496 154 AFTTPLNKVA-RCKTKF-GWHLLQVLSERE 181 (296)
Q Consensus 154 ~~~l~~G~vs-pv~~~~-G~~Ii~v~~~~~ 181 (296)
+|+|++|++| ||++++ ||||+++.++++
T Consensus 237 ~~~l~~Geis~pv~t~~~G~hIikv~~~~~ 266 (325)
T 3nrk_A 237 AAPLPNGGVSEVFRDERKRYCILKIEGKRP 266 (325)
T ss_dssp HTTCCTTCBCCCEECTTSCEEEEEEEEEEE
T ss_pred HHcCCCCCCCceEEeCCCeEEEEEEeccCC
Confidence 9999999999 799999 999999998753
No 68
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.69 E-value=1.1e-16 Score=142.64 Aligned_cols=106 Identities=13% Similarity=0.171 Sum_probs=83.5
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecC---------ChHHHHhhCCCCceecccccccCCCCCcc-------------C-
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVR---------EPEEVALSSLPGFQVLPLRQFGSWGPDIT-------------V- 242 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR---------~~~ey~~ghIpgA~~ip~~~l~~~~~~~~-------------~- 242 (296)
..++++++.+.+.+....++.++|||| ++.||..||||||+|||+..+.+....+. .
T Consensus 22 ~lIs~~~l~~~l~~~~~~~~~~ilDvR~~~~~~~~~~~~ey~~gHIpGAi~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~ 101 (302)
T 3olh_A 22 SMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRTSPYDHMLPGAEHFAEYAGR 101 (302)
T ss_dssp CEECHHHHHHHHHCCCSSCCEEEEECCCCCCC--CCHHHHHHHSCCTTCEECCTTTSSCSSCSSSSCCCCHHHHHHHHHH
T ss_pred CccCHHHHHHHhcCcCCCCCEEEEEeecCCCccCcccHHHHhhCcCCCCeEeCHHHhcCcCCCCCCCCCCHHHHHHHHHH
Confidence 347888999988763112368999999 78899999999999999987643211110 1
Q ss_pred -CCCCCCcEEEEeCC---ChhHHHHHHHHHHcCCCceEEccchHHHhhhccCC
Q 022496 243 -KFDPQKDTYVMCHH---GMRSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDP 291 (296)
Q Consensus 243 -~~~~~~~iv~~C~~---G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~~~~ 291 (296)
.++++++|||||.+ +.+|..+++.|+.+||++|++|+||+.+|..+..|
T Consensus 102 lgi~~~~~VVvyc~~~~g~~~a~ra~~~L~~~G~~~V~~L~GG~~~W~~~g~p 154 (302)
T 3olh_A 102 LGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQNLP 154 (302)
T ss_dssp TTCCSSCEEEEECCCTTSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHSCCC
T ss_pred cCCCCCCEEEEEeCCCCCcchHHHHHHHHHHcCCCcEEECCCCHHHHHHcCCC
Confidence 24789999999963 45799999999999999999999999999987554
No 69
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.68 E-value=3.6e-17 Score=149.68 Aligned_cols=85 Identities=15% Similarity=0.204 Sum_probs=70.6
Q ss_pred CCcEEEecCChHHHH-----------hhCCCCceeccccccc--CCCCC-------c---cC----CCCC---CCcEEEE
Q 022496 204 KEAQLIDVREPEEVA-----------LSSLPGFQVLPLRQFG--SWGPD-------I---TV----KFDP---QKDTYVM 253 (296)
Q Consensus 204 ~~~~llDvR~~~ey~-----------~ghIpgA~~ip~~~l~--~~~~~-------~---~~----~~~~---~~~iv~~ 253 (296)
.+..+||+|++.||. .||||||+|||+.++. ...+. + +. .+++ +++||+|
T Consensus 173 ~~~~lIDvR~~~Ef~G~~~~~~~~~~~GhIpGAiniP~~~l~~~~~~~~~~~~~~~l~~~~~~~~~gi~~~~~d~~ivvy 252 (373)
T 1okg_A 173 PQAIITDARSADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGDGKVLRSEEEIRHNIMTVVQGAGDAADLSSFVFS 252 (373)
T ss_dssp TTCCEEECSCHHHHTCCSSCCTTCSSSSCSTTCEECCGGGGEECCSSSCEECCHHHHHHHHHTTCC-----CCCTTSEEE
T ss_pred cCceEEeCCCHHHccccccccccCCcCccCCCcEEecHHHhhccCCCCCccCCHHHHHHHHHhhhcCCCcccCCCCEEEE
Confidence 467899999999999 9999999999999886 32111 1 11 3477 9999999
Q ss_pred eCCChhHHHHHHHHHHcCCCceEEccchHHHhhhc
Q 022496 254 CHHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYATK 288 (296)
Q Consensus 254 C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~ 288 (296)
|++|.||..++..|+.+||+||++|+|||.+|...
T Consensus 253 C~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~ 287 (373)
T 1okg_A 253 CGSGVTACINIALVHHLGLGHPYLYCGSWSEYSGL 287 (373)
T ss_dssp CSSSSTHHHHHHHHHHTTSCCCEECSSHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHcCCCCeeEeCChHHHHhcC
Confidence 99999999999999999999999999999999863
No 70
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.68 E-value=5.8e-17 Score=150.91 Aligned_cols=103 Identities=17% Similarity=0.174 Sum_probs=82.8
Q ss_pred CCCHHHHHHHhcCCCC----CCCcEEEecC--ChHHHHhhCCCCceecccccccCCCCC-c---------c--CCCCCCC
Q 022496 187 DIQPDELHKKMQDPNF----HKEAQLIDVR--EPEEVALSSLPGFQVLPLRQFGSWGPD-I---------T--VKFDPQK 248 (296)
Q Consensus 187 ~is~~ev~~~L~~~~~----~~~~~llDvR--~~~ey~~ghIpgA~~ip~~~l~~~~~~-~---------~--~~~~~~~ 248 (296)
.++.+++.+.+..... ..+..+||+| ++.||..||||||+|+|+..+...... + + ..+++++
T Consensus 125 ~i~~~~l~~~~~~~~~~~~~~~~~~liDvR~~~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~l~~~~~~~gi~~~~ 204 (423)
T 2wlr_A 125 LVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKLYLISHIPGADYIDTNEVESEPLWNKVSDEQLKAMLAKHGIRHDT 204 (423)
T ss_dssp EECHHHHHHHHTTCCCTTCCSSCEEEEEEESSSCSHHHHCBCTTCEEEEGGGTEETTTTEECCHHHHHHHHHHTTCCTTS
T ss_pred ccCHHHHHHHhhccccccccCCCeEEEEecCCCchhhccCcCCCcEEcCHHHhccCCCCCCCCHHHHHHHHHHcCCCCCC
Confidence 3566777777664211 1367899999 999999999999999999987542111 1 1 2457899
Q ss_pred cEEEEeCCChhHHHHHHHHHHcCCCceEEccchHHHhhhcc
Q 022496 249 DTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYATKV 289 (296)
Q Consensus 249 ~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~~ 289 (296)
+||+||.+|.||..++..|+.+||+||++|+|||.+|....
T Consensus 205 ~ivvyC~~G~~a~~~~~~L~~~G~~~v~~l~Gg~~~W~~~g 245 (423)
T 2wlr_A 205 TVILYGRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAG 245 (423)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHTCSCEEEETTTHHHHHHTT
T ss_pred eEEEECCCchHHHHHHHHHHHcCCCCeEEECCCHHHHhhCC
Confidence 99999999999999999999999999999999999998654
No 71
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.68 E-value=3.2e-17 Score=157.79 Aligned_cols=80 Identities=24% Similarity=0.438 Sum_probs=73.6
Q ss_pred CCcEEEecCChHHHHhhCCCCceecccccccCCCCCccCCCCCCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccchHH
Q 022496 204 KEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 283 (296)
Q Consensus 204 ~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~ 283 (296)
++..+||||++.||..||||||+|+|+.+|... ...++++++||+||.+|.||..+++.|+++|| ||++|+|||.
T Consensus 485 ~~~~~iDvR~~~e~~~~~i~ga~~ip~~~l~~~----~~~~~~~~~iv~~c~~g~rs~~a~~~l~~~G~-~v~~l~gG~~ 559 (565)
T 3ntd_A 485 EDQLLLDVRNPGELQNGGLEGAVNIPVDELRDR----MHELPKDKEIIIFSQVGLRGNVAYRQLVNNGY-RARNLIGGYR 559 (565)
T ss_dssp TTEEEEECSCGGGGGGCCCTTCEECCGGGTTTS----GGGSCTTSEEEEECSSSHHHHHHHHHHHHTTC-CEEEETTHHH
T ss_pred CCcEEEEeCCHHHHhcCCCCCcEECCHHHHHHH----HhhcCCcCeEEEEeCCchHHHHHHHHHHHcCC-CEEEEcChHH
Confidence 478899999999999999999999999998764 34468999999999999999999999999999 9999999999
Q ss_pred Hhhhc
Q 022496 284 AYATK 288 (296)
Q Consensus 284 ~W~~~ 288 (296)
+|..+
T Consensus 560 ~w~~~ 564 (565)
T 3ntd_A 560 TYKFA 564 (565)
T ss_dssp HHHHT
T ss_pred HHHhC
Confidence 99864
No 72
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.68 E-value=2.8e-17 Score=153.01 Aligned_cols=98 Identities=16% Similarity=0.284 Sum_probs=80.4
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecCChHHH-----------HhhCCCCceecccc-------cccCCCC------Cc-
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEV-----------ALSSLPGFQVLPLR-------QFGSWGP------DI- 240 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR~~~ey-----------~~ghIpgA~~ip~~-------~l~~~~~------~~- 240 (296)
..++.+++.+.+.+ ++..+||||++.|| ..||||||+|+|+. ++.+..+ ++
T Consensus 272 ~~i~~~e~~~~l~~----~~~~liDvR~~~e~~G~~~~~~~~~~~GhIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~l~ 347 (423)
T 2wlr_A 272 LMLDMEQARGLLHR----QDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHAGSDSTHMEDFHNPDGTMRSADDIT 347 (423)
T ss_dssp GEECHHHHHTTTTC----SSEEEEECSCHHHHHTSCCSSTTCCCCSEETTCEECCCCSSTTCCGGGBCTTSSBCCHHHHH
T ss_pred heecHHHHHHHhcC----CCceEEecCchhheeeeccCCCCCCcCCCCCCccccccccccccHHHHcCCCCcCCCHHHHH
Confidence 34778888887765 36789999999999 78999999999986 2221111 11
Q ss_pred --c--CCCCCCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccchHHHhhh
Q 022496 241 --T--VKFDPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYAT 287 (296)
Q Consensus 241 --~--~~~~~~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~ 287 (296)
. ..++++++||+||.+|.||..++..|+.+||+||++|+|||.+|..
T Consensus 348 ~~~~~~~~~~~~~ivvyC~sG~rs~~aa~~L~~~G~~~v~~~~GG~~~W~~ 398 (423)
T 2wlr_A 348 AMWKAWNIKPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYDGGWYEWSS 398 (423)
T ss_dssp HHHHTTTCCTTSEEEEECSSSHHHHHHHHHHHHTTCSSEEEESSHHHHHTT
T ss_pred HHHHHcCCCCCCcEEEECCcHHHHHHHHHHHHHcCCCCcceeCccHHHHhc
Confidence 1 2467899999999999999999999999999999999999999987
No 73
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.67 E-value=4e-17 Score=156.43 Aligned_cols=98 Identities=17% Similarity=0.259 Sum_probs=86.5
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecCChHHHHhhCCCCceecccccccCCCCCccCCCCCCCcEEEEeCCChhHHHHHH
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQ 265 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~iv~~C~~G~rs~~aa~ 265 (296)
..++.+++.+.+.++ +..+||||++.||..||||||+|+|...|.... ..++++++||+||.+|.||..++.
T Consensus 377 ~~i~~~~l~~~l~~~----~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~l----~~l~~~~~ivv~C~sG~rs~~aa~ 448 (539)
T 1yt8_A 377 DTIDPTTLADWLGEP----GTRVLDFTASANYAKRHIPGAAWVLRSQLKQAL----ERLGTAERYVLTCGSSLLARFAVA 448 (539)
T ss_dssp CEECHHHHHHHTTST----TEEEEECSCHHHHHHCBCTTCEECCGGGHHHHH----HHHCCCSEEEEECSSSHHHHHHHH
T ss_pred CccCHHHHHHHhcCC----CeEEEEeCCHHHhhcCcCCCchhCCHHHHHHHH----HhCCCCCeEEEEeCCChHHHHHHH
Confidence 457888998888763 678999999999999999999999999886642 335889999999999999999999
Q ss_pred HHHHcCCCceEEccchHHHhhhccCC
Q 022496 266 WLQTQGFRRVFNVSGGIHAYATKVDP 291 (296)
Q Consensus 266 ~L~~~G~~~v~~l~GG~~~W~~~~~~ 291 (296)
.|+.+||++|++|+|||.+|.....|
T Consensus 449 ~L~~~G~~~v~~l~GG~~~W~~~g~p 474 (539)
T 1yt8_A 449 EVQALSGKPVFLLDGGTSAWVAAGLP 474 (539)
T ss_dssp HHHHHHCSCEEEETTHHHHHHHTTCC
T ss_pred HHHHcCCCCEEEeCCcHHHHHhCCCC
Confidence 99999999999999999999976544
No 74
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.66 E-value=1e-16 Score=146.69 Aligned_cols=99 Identities=11% Similarity=0.124 Sum_probs=79.9
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecCC--------hHHHHhhCCCCceeccccc-ccCC------CCCcc---------
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVRE--------PEEVALSSLPGFQVLPLRQ-FGSW------GPDIT--------- 241 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR~--------~~ey~~ghIpgA~~ip~~~-l~~~------~~~~~--------- 241 (296)
..++.+++.+.+.+ .++||||+ +.||..||||||+|+|+.. |... ...+.
T Consensus 14 ~~Is~~el~~~l~~------~~iIDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~~l~~~~~~~~~~~~lp~~~~f~~~l 87 (373)
T 1okg_A 14 VFLDPSEVADHLAE------YRIVDCRYSLKIKDHGSIQYAKEHVKSAIRADVDTNLSKLVPTSTARHPLPPXAEFIDWC 87 (373)
T ss_dssp CEECHHHHTTCGGG------SEEEECCCCSSSTTTTTTHHHHCEETTCEECCTTTTSCCCCTTCCCSSCCCCHHHHHHHH
T ss_pred cEEcHHHHHHHcCC------cEEEEecCCccccccchhHHhhCcCCCCEEeCchhhhhcccccCCccccCCCHHHHHHHH
Confidence 45778888776642 78999998 6899999999999999986 6542 00110
Q ss_pred --CCCCCCCcEEEEe-CCChhHH-HHHHHHHHcCCCceEEccchHHHhhhccCC
Q 022496 242 --VKFDPQKDTYVMC-HHGMRSL-QVAQWLQTQGFRRVFNVSGGIHAYATKVDP 291 (296)
Q Consensus 242 --~~~~~~~~iv~~C-~~G~rs~-~aa~~L~~~G~~~v~~l~GG~~~W~~~~~~ 291 (296)
..++++++||||| .+|.||. .+++.|+.+|| ||++|+||+.+|..+..|
T Consensus 88 ~~~gi~~d~~VVvYc~~~G~rsa~ra~~~L~~~G~-~V~~L~GG~~aW~~~g~p 140 (373)
T 1okg_A 88 MANGMAGELPVLCYDDECGAMGGCRLWWMLNSLGA-DAYVINGGFQACKAAGLE 140 (373)
T ss_dssp HHTTCSSSSCEEEECSSTTTTTHHHHHHHHHHHTC-CEEEETTTTHHHHTTTCC
T ss_pred HHcCCCCCCeEEEEeCCCCchHHHHHHHHHHHcCC-eEEEeCCCHHHHHhhcCC
Confidence 1357899999999 7888886 99999999999 999999999999977544
No 75
>1m5y_A SurviVal protein, surviVal protein SURA; surviVal protein A, periplasmic molecular chaperone, membrane protein folding, GRAM negative bacteria; 3.00A {Escherichia coli} SCOP: a.223.1.2 d.26.1.1 d.26.1.1 PDB: 2pv3_A
Probab=99.65 E-value=3.9e-17 Score=151.30 Aligned_cols=113 Identities=19% Similarity=0.291 Sum_probs=92.4
Q ss_pred ccCchhhc-ccccCCCCCCCCCCCceEEEeeEeeccc----------hHHHHHHHHHHHhcCCccHHHHHHhhCCCCccc
Q 022496 65 SFTSPKAA-SFSSGTEGSSPGGGDREILVQHLLVKED----------DLNLLSELQRRVSQGREDLSDLAVEHSICPSKG 133 (296)
Q Consensus 65 ~~~~~e~~-~~~~~~~~i~~~~~~~~~~~~~Il~~~~----------~~~~a~~i~~~l~~~g~~F~~la~~~S~d~~~~ 133 (296)
.+++.+.. .|..+. .....+++++++||+++.+ +++.|++++++|+ +|.+|+++|++||+|+++.
T Consensus 131 ~vsd~ei~~~y~~~~---~~~~~~~~~~~~~i~i~~~~~~s~~~~~~~~~~a~~~~~~l~-~g~~F~~lA~~~S~~~~~~ 206 (408)
T 1m5y_A 131 TILPQEVESLAQQVG---NQNDASTELNLSHILIPLPENPTSDQVNEAESQARAIVDQAR-NGADFGKLAIAHSADQQAL 206 (408)
T ss_dssp CCCTTHHHHHHHCC----------CCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHH-TTCCHHHHHHHHCCSTTGG
T ss_pred CCCHHHHHHHHHhhh---hhcCCcccEEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHcCCCcccc
Confidence 34455443 444443 2334557899999999743 3678999999996 8999999999999999999
Q ss_pred CCcccccccCCCCcHHHHHHHhcCCCCcee-ceeecCcceEEEeehhhh
Q 022496 134 EGGMLGWVRKGQLVPEFEEVAFTTPLNKVA-RCKTKFGWHLLQVLSERE 181 (296)
Q Consensus 134 ~gG~lg~~~~~~l~~~~~~~~~~l~~G~vs-pv~~~~G~~Ii~v~~~~~ 181 (296)
+||+|||++.+.++|+|.++++.|++|++| ||++++||||+++.+.++
T Consensus 207 ~gG~lg~~~~~~l~~~~~~~~~~l~~G~vs~pv~~~~g~~iikv~~~~~ 255 (408)
T 1m5y_A 207 NGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRG 255 (408)
T ss_dssp GTTEEEEECGGGSCHHHHTGGGTCCTTCEEEEEEETTEEEEEEEEEECC
T ss_pred cCCcccccchhhccHHHHHHHHhCCCCCccCeeecCCeEEEEEEEEecC
Confidence 999999999999999999999999999999 799999999999998665
No 76
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.65 E-value=1e-17 Score=157.79 Aligned_cols=80 Identities=24% Similarity=0.407 Sum_probs=0.0
Q ss_pred CCcEEEecCChHHHHhhCCCCceecccccccCCCCCccCCCCCCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccchHH
Q 022496 204 KEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 283 (296)
Q Consensus 204 ~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~ 283 (296)
++..+||||++.||..||||||+|+|+.++.+.. ..++++++||+||.+|.||..++..|+.+||+||++|+|||.
T Consensus 386 ~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~----~~l~~~~~iv~~C~~G~rs~~a~~~L~~~G~~~v~~l~GG~~ 461 (466)
T 3r2u_A 386 NESHILDVRNDNEWNNGHLSQAVHVPHGKLLETD----LPFNKNDVIYVHCQSGIRSSIAIGILEHKGYHNIINVNEGYK 461 (466)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcEEEEeCCHHHHhcCcCCCCEECCHHHHHHHH----hhCCCCCeEEEECCCChHHHHHHHHHHHcCCCCEEEecChHH
Confidence 3678999999999999999999999999987643 346889999999999999999999999999999999999999
Q ss_pred Hhhh
Q 022496 284 AYAT 287 (296)
Q Consensus 284 ~W~~ 287 (296)
+|..
T Consensus 462 ~W~~ 465 (466)
T 3r2u_A 462 DIQL 465 (466)
T ss_dssp ----
T ss_pred HHhh
Confidence 9975
No 77
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.62 E-value=2e-16 Score=135.43 Aligned_cols=80 Identities=19% Similarity=0.177 Sum_probs=65.6
Q ss_pred CCcEEEecCChHHHHhhCCCCceecccc--cccCC-----------CCCccCCCCCCCcEEEEeCCCh-hHHHHHHHHHH
Q 022496 204 KEAQLIDVREPEEVALSSLPGFQVLPLR--QFGSW-----------GPDITVKFDPQKDTYVMCHHGM-RSLQVAQWLQT 269 (296)
Q Consensus 204 ~~~~llDvR~~~ey~~ghIpgA~~ip~~--~l~~~-----------~~~~~~~~~~~~~iv~~C~~G~-rs~~aa~~L~~ 269 (296)
++.++||+|++.||..||||||+|+|+. ++... .......++.+++|||||.+|. +|..+++.|+
T Consensus 5 ~~~~iiDvR~~~ey~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivvyc~~g~~~s~~a~~~L~- 83 (230)
T 2eg4_A 5 EDAVLVDTRPRPAYEAGHLPGARHLDLSAPKLRLREEAELKALEGGLTELFQTLGLRSPVVLYDEGLTSRLCRTAFFLG- 83 (230)
T ss_dssp TTCEEEECSCHHHHHHCBCTTCEECCCCSCCCCCCSHHHHHHHHHHHHHHHHHTTCCSSEEEECSSSCHHHHHHHHHHH-
T ss_pred CCEEEEECCChhhHhhCcCCCCEECCccchhcccCCCCCcCCCHHHHHHHHHhcCCCCEEEEEcCCCCccHHHHHHHHH-
Confidence 5789999999999999999999999998 44210 0111122345899999999998 9999999999
Q ss_pred cCCCceEEccchHHHhhh
Q 022496 270 QGFRRVFNVSGGIHAYAT 287 (296)
Q Consensus 270 ~G~~~v~~l~GG~~~W~~ 287 (296)
+||+||++|+|| |..
T Consensus 84 ~G~~~v~~l~GG---W~~ 98 (230)
T 2eg4_A 84 LGGLEVQLWTEG---WEP 98 (230)
T ss_dssp HTTCCEEEECSS---CGG
T ss_pred cCCceEEEeCCC---Ccc
Confidence 999999999999 765
No 78
>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4
Probab=99.60 E-value=6.2e-16 Score=124.63 Aligned_cols=101 Identities=15% Similarity=0.092 Sum_probs=71.2
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecCChHHHHhhCCCCceecccccccCCCC--CccCCCC-----------CCCcEEE
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGP--DITVKFD-----------PQKDTYV 252 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~~~~~--~~~~~~~-----------~~~~iv~ 252 (296)
..++++++.+++.+.. ++..+||||++.||..||||||+|||+..+..... .+...++ ..+.||+
T Consensus 15 ~~i~~~~l~~~l~~~~--~~~~liDvR~~~ey~~gHI~gainip~~~~~~~~~~~~l~~~lp~~~~~~~~~~~~~~~VVv 92 (157)
T 1whb_A 15 GAITAKELYTMMTDKN--ISLIIMDARRMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYVVL 92 (157)
T ss_dssp SEECHHHHHHHHTCSS--SCEEEEEESCHHHHHHCCBTTCEEECSSSCCTTCCHHHHHHSCCTTHHHHHHGGGTSSEEEE
T ss_pred CccCHHHHHHHHhcCC--CCeEEEECCCHHHHHhccccCCcccCHHHccCCCcHHHHHHHCChHHHHHHHhcCCCCEEEE
Confidence 4588899998887531 26789999999999999999999999887643210 0111111 2345999
Q ss_pred EeCCChh----HHHHHHHHHH----c----CCCc-eEEccchHHHhhhc
Q 022496 253 MCHHGMR----SLQVAQWLQT----Q----GFRR-VFNVSGGIHAYATK 288 (296)
Q Consensus 253 ~C~~G~r----s~~aa~~L~~----~----G~~~-v~~l~GG~~~W~~~ 288 (296)
||.+|.+ +..+++.|.+ . ||.+ |++|+||+.+|...
T Consensus 93 y~~~~~~~~~~a~~~~~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~ 141 (157)
T 1whb_A 93 LDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC 141 (157)
T ss_dssp ECSSCCGGGCCTTCHHHHHHHTTTTTCSSCCCSSCCEEESSCHHHHHHH
T ss_pred ECCCCCccccccccHHHHHHHHHHHhccccccCCCeEEEcchHHHHHHH
Confidence 9987754 3455666652 2 4554 99999999999974
No 79
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4
Probab=99.60 E-value=5.7e-16 Score=124.79 Aligned_cols=101 Identities=15% Similarity=0.095 Sum_probs=71.0
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecCChHHHHhhCCCCceecccccccCCCC--CccCCC-----------CCCCcEEE
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGP--DITVKF-----------DPQKDTYV 252 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR~~~ey~~ghIpgA~~ip~~~l~~~~~--~~~~~~-----------~~~~~iv~ 252 (296)
..++++++.+++.+.. ++..+||||++.||..||||||+|||+..+..... .+...+ .+.+.||+
T Consensus 20 ~~is~~~l~~~l~~~~--~~~~liDvR~~~ey~~gHI~gAinip~~~l~~~~~~~~l~~~lp~~~~~l~~~~~~~~~VVv 97 (157)
T 2gwf_A 20 GAITAKELYTMMTDKN--ISLIIMDARRMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYVVL 97 (157)
T ss_dssp CEECHHHHHHHHHSTT--SCEEEEECSCHHHHHHSCBTTCEECCGGGCCTTCCHHHHHHTSCHHHHHHHHTTTTSSEEEE
T ss_pred CccCHHHHHHHHhcCC--CCeEEEECCCHHHHHhcCccCCcccCHHHcCCCCcHHHHHHHcCHHHHHHHHhcCCCCEEEE
Confidence 5588999998887531 26799999999999999999999999987643210 011111 23345999
Q ss_pred EeCCChh----HHHHHHHHH----Hc----CCCc-eEEccchHHHhhhc
Q 022496 253 MCHHGMR----SLQVAQWLQ----TQ----GFRR-VFNVSGGIHAYATK 288 (296)
Q Consensus 253 ~C~~G~r----s~~aa~~L~----~~----G~~~-v~~l~GG~~~W~~~ 288 (296)
||.+|.+ +..+++.|. .. ||.+ |++|+||+.+|...
T Consensus 98 y~~~~~~~~~~a~~~l~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~ 146 (157)
T 2gwf_A 98 LDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC 146 (157)
T ss_dssp ECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH
T ss_pred EcCCCCccccCcccHHHHHHHHHHhhccccccCCceEEEccHHHHHHHH
Confidence 9987754 334455554 22 4554 99999999999974
No 80
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.45 E-value=3.4e-14 Score=134.09 Aligned_cols=96 Identities=17% Similarity=0.297 Sum_probs=79.5
Q ss_pred hcCCCHHHHHHHhcCCCCCCCcEEEecCChHHHHhhCCCCceeccccc-ccCCCCCccCCCCCCCcEEEEeCCChhHHHH
Q 022496 185 LQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQ-FGSWGPDITVKFDPQKDTYVMCHHGMRSLQV 263 (296)
Q Consensus 185 ~~~is~~ev~~~L~~~~~~~~~~llDvR~~~ey~~ghIpgA~~ip~~~-l~~~~~~~~~~~~~~~~iv~~C~~G~rs~~a 263 (296)
...++++++.+.+.+ . ++||+|++.+|..||||||+|+|+.. |..+.+.+ .+++++|||||..|. +..+
T Consensus 272 ~~~is~~~l~~~l~~-----~-~iiD~R~~~~y~~ghIpGA~~i~~~~~~~~~~~~l---~~~~~~vvvy~~~~~-~~~~ 341 (474)
T 3tp9_A 272 RVDLPPERVRAWREG-----G-VVLDVRPADAFAKRHLAGSLNIPWNKSFVTWAGWL---LPADRPIHLLAADAI-APDV 341 (474)
T ss_dssp ECCCCGGGHHHHHHT-----S-EEEECSCHHHHHHSEETTCEECCSSTTHHHHHHHH---CCSSSCEEEECCTTT-HHHH
T ss_pred CceeCHHHHHHHhCC-----C-EEEECCChHHHhccCCCCeEEECcchHHHHHHHhc---CCCCCeEEEEECCCc-HHHH
Confidence 356888999998875 3 89999999999999999999999874 44443333 267899999999876 5669
Q ss_pred HHHHHHcCCCceEEccchHHHhhhccC
Q 022496 264 AQWLQTQGFRRVFNVSGGIHAYATKVD 290 (296)
Q Consensus 264 a~~L~~~G~~~v~~l~GG~~~W~~~~~ 290 (296)
++.|+.+||++|++|.+|+.+|..+..
T Consensus 342 ~~~L~~~G~~~v~~~l~G~~~W~~~g~ 368 (474)
T 3tp9_A 342 IRALRSIGIDDVVDWTDPAAVDRAAPD 368 (474)
T ss_dssp HHHHHHTTCCCEEEEECGGGGTTCCGG
T ss_pred HHHHHHcCCcceEEecCcHHHHHhccc
Confidence 999999999999987779999987543
No 81
>3rgc_A Possible periplasmic protein; ppiase, chaperone; 2.30A {Campylobacter jejuni}
Probab=99.38 E-value=3.8e-14 Score=122.87 Aligned_cols=107 Identities=12% Similarity=0.105 Sum_probs=81.9
Q ss_pred cCchhh-cccccCCCCCCCCCCCceEEEeeEeeccchHHHHHHHHHHHhcCCccHHHHHHhhCCCCcccCCcccccccCC
Q 022496 66 FTSPKA-ASFSSGTEGSSPGGGDREILVQHLLVKEDDLNLLSELQRRVSQGREDLSDLAVEHSICPSKGEGGMLGWVRKG 144 (296)
Q Consensus 66 ~~~~e~-~~~~~~~~~i~~~~~~~~~~~~~Il~~~~~~~~a~~i~~~l~~~g~~F~~la~~~S~d~~~~~gG~lg~~~~~ 144 (296)
+++.|. +.|..++ .....+++++++||++..+ +++++|+ +|.+|+ -||++||++.+
T Consensus 114 vtd~ei~~yy~~~~---~~f~~~~~v~~~~i~~~~~------~~~~~l~-~g~~f~-------------l~g~lg~~~~~ 170 (252)
T 3rgc_A 114 FSDDGAKKFFEQNK---DKFTFYTQINANIYLSNNP------QTLENIK-NTKKTI-------------LKPQNASLNTS 170 (252)
T ss_dssp CCHHHHHHHHHTCG---GGCCEESEEEEEEEECSCH------HHHHHHH-HHCCCC-------------SCCEEEEEETT
T ss_pred CCHHHHHHHHHhCH---HhcCCCceEEEEEecCCCH------HHHHHHH-hCCCcc-------------cccccceecHH
Confidence 355555 4555554 2344457899999998632 3567785 788886 27899999999
Q ss_pred CCcHHHHHHHhcCCCCcee-ceeecCcceEEEeehhhhhhhhcCCCHHHHHHHhc
Q 022496 145 QLVPEFEEVAFTTPLNKVA-RCKTKFGWHLLQVLSEREASLLQDIQPDELHKKMQ 198 (296)
Q Consensus 145 ~l~~~~~~~~~~l~~G~vs-pv~~~~G~~Ii~v~~~~~~~~~~~is~~ev~~~L~ 198 (296)
+++|+|.+++++|++|++| |+++++||||+++.++++. ...+.++++..+.
T Consensus 171 ~l~~~~~~a~~~l~~G~is~pv~t~~G~hiikv~~~~~~---~~~~~eevk~~I~ 222 (252)
T 3rgc_A 171 NADPRLLGLLSQIPVGSFSPVLNGKNGYELYEVKSKDGT---QTPEYEQVKNEVL 222 (252)
T ss_dssp TSCHHHHHHHHHSCTTCBCCCBTTTTCEEEEEEEECSCE---ECCCHHHHHHHHH
T ss_pred hcCHHHHHHHHcCCCCCcCCcEEeCCeEEEEEEecccCC---ccCChHHHHHHHH
Confidence 9999999999999999999 7999999999999998774 3355666655554
No 82
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.31 E-value=5.8e-12 Score=112.71 Aligned_cols=104 Identities=13% Similarity=0.139 Sum_probs=80.0
Q ss_pred cCCCHHHHHHHhcCCCCCCCcEEEecC--------Ch-HHH-HhhCCCCceecccccccCCCCCccC-------------
Q 022496 186 QDIQPDELHKKMQDPNFHKEAQLIDVR--------EP-EEV-ALSSLPGFQVLPLRQFGSWGPDITV------------- 242 (296)
Q Consensus 186 ~~is~~ev~~~L~~~~~~~~~~llDvR--------~~-~ey-~~ghIpgA~~ip~~~l~~~~~~~~~------------- 242 (296)
+-|++.++.+++..... ...++||++ +. .|| +.||||||++++++.+.+....+..
T Consensus 28 ~LIsp~~l~~ll~~~~~-~rvv~lDasw~lP~~~r~~~~E~~~~~HIPGAv~~Dld~~~d~~~~~ph~LP~~~~f~~~l~ 106 (327)
T 3utn_X 28 DLISPKAFVKLVASEKV-HRIVPVDATWYLPSWKLDNKVDFLTKPRIPNSIFFDIDAISDKKSPYPHMFPTKKVFDDAMS 106 (327)
T ss_dssp EEECHHHHHHHHHHCSS-SCEEEEECCCCCGGGCCCHHHHHHHSCBCTTCEECCTTTSSCTTSSSTTCCCCHHHHHHHHH
T ss_pred cccCHHHHHHHHhCCCC-CcEEEEEecCCCCCCCCCHHHHHHhhCcCCCCeeeChHHhcCCCCCCCCCCcCHHHHHHHHH
Confidence 35889999998875421 357889985 33 466 7899999999999877653322211
Q ss_pred --CCCCCCcEEEEeCCC-hhHHHHHHHHHHcCCCceEEccchHHHhhhccCC
Q 022496 243 --KFDPQKDTYVMCHHG-MRSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDP 291 (296)
Q Consensus 243 --~~~~~~~iv~~C~~G-~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~~~~ 291 (296)
++.++++||+|+..| ..|+.+++.|+-.||+||++|+|| .+|..+..|
T Consensus 107 ~lGI~~d~~VVvYD~~~~~~AaR~wW~Lr~~Gh~~V~vLdGg-~aW~~~g~p 157 (327)
T 3utn_X 107 NLGVQKDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLNNF-NQYREFKYP 157 (327)
T ss_dssp HTTCCTTCEEEEECSSSSSSHHHHHHHHHHTTCSEEEEESCH-HHHHHTTCC
T ss_pred HcCCCCCCEEEEEeCCCCcHHHHHHHHHHHcCCCceeecccH-HHHHHhCCC
Confidence 467899999999866 568899999999999999999987 899987654
No 83
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.25 E-value=5.1e-12 Score=118.88 Aligned_cols=79 Identities=11% Similarity=0.051 Sum_probs=63.6
Q ss_pred CCcEEEecCChHHHHhhCCCCceecccc-cccCCCCCccCCCCCCCcEEEEeCCChhHHHHHHHHHHcCCCceEE-ccch
Q 022496 204 KEAQLIDVREPEEVALSSLPGFQVLPLR-QFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFN-VSGG 281 (296)
Q Consensus 204 ~~~~llDvR~~~ey~~ghIpgA~~ip~~-~l~~~~~~~~~~~~~~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~-l~GG 281 (296)
++.++||+|++.+|..||||||+|+|+. .|..+.+.+ ++++++||+||. +.++..+++.|+.+||++|+. ++|+
T Consensus 295 ~~~~ilD~R~~~~y~~gHIpGAv~ip~~~~~~~~~~~~---~~~~~~vvly~~-~~~a~~a~~~L~~~G~~~v~~~l~g~ 370 (466)
T 3r2u_A 295 TNRLTFDLRSKEAYHGGHIEGTINIPYDKNFINQIGWY---LNYDQEINLIGD-YHLVSKATHTLQLIGYDDIAGYQLPQ 370 (466)
T ss_dssp CCSEEEECSCHHHHHHSCCTTCEECCSSTTHHHHHTTT---CCTTSCEEEESC-HHHHHHHHHHHHTTTCCCEEEEECCC
T ss_pred CCeEEEECCCHHHHhhCCCCCcEECCccHHHHHHHHhc---cCCCCeEEEEEC-CchHHHHHHHhhhhhcccccccccCc
Confidence 5789999999999999999999999987 455544433 378999999999 668999999999999999987 6777
Q ss_pred HHHhh
Q 022496 282 IHAYA 286 (296)
Q Consensus 282 ~~~W~ 286 (296)
...|.
T Consensus 371 ~~~~~ 375 (466)
T 3r2u_A 371 SKIQT 375 (466)
T ss_dssp -----
T ss_pred ccccH
Confidence 65554
No 84
>2lj4_A Peptidyl-prolyl CIS-trans isomerase/rotamase, PUT; tbpin1; NMR {Trypanosoma brucei}
Probab=99.17 E-value=2e-12 Score=98.17 Aligned_cols=82 Identities=13% Similarity=-0.050 Sum_probs=67.7
Q ss_pred cccccCCchhhhh---------------ccccccccccccCCccccccCCchhH-HhhhhccCCCCCCCceeeeeccccc
Q 022496 3 LRASQLASPVLCA---------------ITQSLIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSF 66 (296)
Q Consensus 3 ~~~~~~~~~~~~~---------------~~~~~~~~~~~~r~~~~~~~~~f~~l-~~~s~~~~~~~~~~~l~~~~~~~~~ 66 (296)
+||+||+-+.... .+......++++++.+..|...|+.+ ++|| |..++.+||+|||+..++|+
T Consensus 5 vrasHILi~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~~i~~g~~~F~~lA~~~S-d~~sa~~GGdLG~~~~~~~~ 83 (115)
T 2lj4_A 5 LRAAHLLVKFSGSRNPVSRRTGDSTADVTYEDAIKELQKWSQRIASGEVSFEEAASQRS-DCGSYASGGDLGFFSSGEMM 83 (115)
T ss_dssp EEEEEEEECCTTSSCCCCTTTSSCCTTSCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHC-CSGGGGTTSEEEEEETTSSC
T ss_pred EEEEEEEEecCCccChhhhhhccccccccHHHHHHHHHHHHHHHHcCchhHHHHHHHhC-CCcccccCCccceecCCCCC
Confidence 7999999765432 12233445667777777887799999 9999 66799999999999999999
Q ss_pred CchhhcccccCCCCCCCCC
Q 022496 67 TSPKAASFSSGTEGSSPGG 85 (296)
Q Consensus 67 ~~~e~~~~~~~~~~i~~~~ 85 (296)
++|+.++|.+++|+||+|.
T Consensus 84 ~~f~~a~~~l~~GeiS~pv 102 (115)
T 2lj4_A 84 KPFEDAVRALKIGDISPIV 102 (115)
T ss_dssp HHHHHHHTTSCBTCBCCCE
T ss_pred chHHHHHhcCCCCCCCCcE
Confidence 9999999999999999884
No 85
>4g2p_A Chaperone SURA; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, pcsep; 1.82A {Salmonella enterica subsp}
Probab=98.96 E-value=4.1e-11 Score=90.29 Aligned_cols=84 Identities=10% Similarity=-0.143 Sum_probs=69.6
Q ss_pred ccccccCCchhhhh-ccccccccccccCCccccccCCchhH-HhhhhccCCCCCCCceeeeecccccCchhhcccccCCC
Q 022496 2 MLRASQLASPVLCA-ITQSLIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTE 79 (296)
Q Consensus 2 ~~~~~~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~f~~l-~~~s~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~ 79 (296)
.+|++||+-+.+.. ........+++++..+..|...|+.+ ++||+|+.++.+||+|||+..+.+.++|+.+.|.+++|
T Consensus 8 ~v~~~hIli~~~~~~~~~~a~~~a~~i~~~l~~G~~~F~~lA~~~S~d~~s~~~GG~lG~~~~~~l~~~f~~a~~~l~~G 87 (110)
T 4g2p_A 8 EVHARHILLKPSPIMNDQQARLKLEEIAADIKSGKTTFAAAAKEYSQDPGSANQGGDLGWATPDIFDPAFRDALTKLHKG 87 (110)
T ss_dssp EEEEEEEEECCCSSSCHHHHHHHHHHHHHHHHTTSSCHHHHHHHHCCCTTTGGGTTEEEEECGGGSCHHHHHHHHTCCTT
T ss_pred EEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHcCcccHHHHHHHhCCCccccccccccCeecccccCHHHHHHHHcCCCC
Confidence 36899999776421 12234455677788777887799999 99999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 022496 80 GSSPGG 85 (296)
Q Consensus 80 ~i~~~~ 85 (296)
+||.|.
T Consensus 88 eis~pv 93 (110)
T 4g2p_A 88 QISAPV 93 (110)
T ss_dssp CBCCCE
T ss_pred CcCccE
Confidence 999874
No 86
>3i6c_A Peptidyl-prolyl CIS-trans isomerase NIMA- interacting 1; SBDD, small molecule, ppiase, cell cycle, nucleus, phosphoprotein, rotamase; HET: GIA; 1.30A {Homo sapiens} PDB: 3ik8_A 3ikd_A* 3ikg_A* 3jyj_A* 3kac_A* 1nmw_A
Probab=98.89 E-value=6.9e-11 Score=90.63 Aligned_cols=83 Identities=16% Similarity=0.018 Sum_probs=66.2
Q ss_pred ccccccCCchhhhh-------------ccccccccccccCCccccccCCchhH-HhhhhccCCCCCCCceeeeecccccC
Q 022496 2 MLRASQLASPVLCA-------------ITQSLIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFT 67 (296)
Q Consensus 2 ~~~~~~~~~~~~~~-------------~~~~~~~~~~~~r~~~~~~~~~f~~l-~~~s~~~~~~~~~~~l~~~~~~~~~~ 67 (296)
.+|++||+-+.+.. .+......+++++..+..|...|+.+ ++||.+ .++.+||+|||+..+++++
T Consensus 14 ~v~~~HILi~~~~~~~p~~~~~~~~~~~~~~A~~~~~~i~~~l~~G~~~F~~lA~~~S~~-~sa~~GGdLG~~~~~~l~~ 92 (123)
T 3i6c_A 14 RVRCSHLLVKHSQSRRPSSWRQEQITRTQEEALELINGYIQKIKSGEEDFESLASQFSDC-SSAKARGDLGAFSRGQMQK 92 (123)
T ss_dssp EEEEEEEEECCTTSSSCCBTTBSSCCCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHCSS-GGGGGTTEEEEEETTTSCH
T ss_pred EEEEEEEEEecCCccCccccchhhhhhHHHHHHHHHHHHHHHHHcCcccHHHHHHHhCCC-chhhhCCceeeEcCCCCCH
Confidence 47999999875321 22233444556666677776699999 999965 6889999999999999999
Q ss_pred chhhcccccCCCCCCCCC
Q 022496 68 SPKAASFSSGTEGSSPGG 85 (296)
Q Consensus 68 ~~e~~~~~~~~~~i~~~~ 85 (296)
+|+.++|.+++|+||+|.
T Consensus 93 ~f~~a~f~l~~GeiS~pv 110 (123)
T 3i6c_A 93 PFEDASFALRTGEMSGPV 110 (123)
T ss_dssp HHHHHHHHSCTTCBCSCE
T ss_pred HHHHHHHhCCCCCccccE
Confidence 999999999999999874
No 87
>3gpk_A PPIC-type peptidyl-prolyl CIS-trans isomerase; rotamase,ppiase domain, 11189O3,PSI2., structural genomics; 1.55A {Novosphingobium aromaticivorans}
Probab=98.86 E-value=6.9e-11 Score=89.16 Aligned_cols=82 Identities=6% Similarity=-0.057 Sum_probs=71.5
Q ss_pred ccccccCCchhhhhccccccccccccCCccccccCCchhH-HhhhhccCCCCCCCceeeeecccccCchhhcccccCCCC
Q 022496 2 MLRASQLASPVLCAITQSLIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEG 80 (296)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~f~~l-~~~s~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~ 80 (296)
.+|.+||+-+.+++.+.......++++..+..| .+|+.+ ++||+|+ ++.+||+|||+..+++.++|+.++|.+++|+
T Consensus 7 ~~~v~hIli~~~~~~~~~a~~~A~~i~~~l~~G-~~F~~lA~~~S~d~-sa~~GGdlG~~~~~~l~~~f~~a~~~l~~Ge 84 (112)
T 3gpk_A 7 EYRIGEIFLAATEENKPQVFANAEKIVEQLKQG-GSFVAYARQYSEAS-TAAVGGDLGWIRLAQLPTELATTAASMGPGQ 84 (112)
T ss_dssp EEEEEEEEEECCGGGHHHHHHHHHHHHHHHHTT-CCHHHHHHHHCCST-TGGGTTEEEEECGGGSCHHHHHHHHHCCTTC
T ss_pred EEEEEEEEEeCChhhHHHHHHHHHHHHHHHHCC-CCHHHHHHHhCCCc-chhcCcccceEcccccCHHHHHHHHhCCCCC
Confidence 368899998876666777777788888877777 499999 9999994 8899999999999999999999999999999
Q ss_pred CCCCC
Q 022496 81 SSPGG 85 (296)
Q Consensus 81 i~~~~ 85 (296)
||+|.
T Consensus 85 iS~pv 89 (112)
T 3gpk_A 85 LAGPV 89 (112)
T ss_dssp EEEEE
T ss_pred ccceE
Confidence 99774
No 88
>3tc5_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; PIN1 mutant (R14A), oncogenic transformation, small molecule cycle, rotamase, phosphoprotein; HET: 3T5 P6G; 1.40A {Homo sapiens} PDB: 2itk_A* 2q5a_A* 2xp3_A* 2xp4_A* 2xp5_A* 2xp7_A* 2xp8_A* 2xp9_A* 2xpa_A* 2xpb_A* 3kab_A* 3kag_A* 3kah_A* 3kai_A* 3kce_A* 3ntp_A* 3odk_A* 3oob_A* 2zr6_A* 1f8a_B* ...
Probab=98.81 E-value=1.4e-10 Score=93.64 Aligned_cols=83 Identities=16% Similarity=0.019 Sum_probs=66.6
Q ss_pred ccccccCCchhhhh-------------ccccccccccccCCccccccCCchhH-HhhhhccCCCCCCCceeeeecccccC
Q 022496 2 MLRASQLASPVLCA-------------ITQSLIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFT 67 (296)
Q Consensus 2 ~~~~~~~~~~~~~~-------------~~~~~~~~~~~~r~~~~~~~~~f~~l-~~~s~~~~~~~~~~~l~~~~~~~~~~ 67 (296)
.+|++||+-+.... .+......+++++..+..|...|+.| ++||.+ .++.+||+|||+..++|++
T Consensus 57 ~v~~~HILi~~~~~~~p~~~~~~~~~~~~~~A~~~~~~i~~~l~~g~~~F~~lA~~~Sd~-~sa~~GGdLG~~~~~~l~~ 135 (166)
T 3tc5_A 57 RVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDC-SSAKARGDLGAFSRGQMQK 135 (166)
T ss_dssp CEEEEEEEECCTTSSSCCBTTBSSCCCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHCSS-GGGGGTTEEEEECTTSSCH
T ss_pred ceeEeeeEEecccccCccccchhhhhhHHHHHHHHHHHHHHHHHcCccCHHHHHHHhCcc-cHHhcCCccceecccccCH
Confidence 47999999885421 22333444556666677776799999 999955 7899999999999999999
Q ss_pred chhhcccccCCCCCCCCC
Q 022496 68 SPKAASFSSGTEGSSPGG 85 (296)
Q Consensus 68 ~~e~~~~~~~~~~i~~~~ 85 (296)
+|+.++|.+++|+||.+.
T Consensus 136 ~f~~a~f~l~~GeiS~pv 153 (166)
T 3tc5_A 136 PFEDASFALRTGEMSGPV 153 (166)
T ss_dssp HHHHHHHHSCTTCBCCCE
T ss_pred HHHHHHHhCCCCCCcccE
Confidence 999999999999999885
No 89
>1j6y_A Peptidyl-prolyl CIS-trans isomerase; parvulin, PIN1, phosphorylation; NMR {Arabidopsis thaliana} SCOP: d.26.1.1
Probab=98.67 E-value=4.9e-10 Score=87.87 Aligned_cols=83 Identities=8% Similarity=-0.043 Sum_probs=67.0
Q ss_pred ccccccCCchhh-----------------hhccccccccccccCCccccccCCchhH-HhhhhccCCCCCCCceeeeecc
Q 022496 2 MLRASQLASPVL-----------------CAITQSLIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIIS 63 (296)
Q Consensus 2 ~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~r~~~~~~~~~f~~l-~~~s~~~~~~~~~~~l~~~~~~ 63 (296)
.+|++||+-+.. ++.+......+++++..+..|...|+.+ ++||+++ ++.+||+|||+..+
T Consensus 26 ~v~~~HILi~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~a~~i~~~l~~G~~~F~~lA~~~S~~~-sa~~GGdLG~~~~~ 104 (139)
T 1j6y_A 26 QVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVATRVSDCS-SAKRGGDLGSFGRG 104 (139)
T ss_dssp SCEEECCEECSCTTSSSSSCSCCCSCCCSCCCHHHHHHHHHHHHHHHHSSCCCCHHHHHHSSCHH-HHHTCSEEEECSSS
T ss_pred eEEEEEEEEecCccccccccccccccccchHHHHHHHHHHHHHHHHHHcCcccHHHHHHHhccCc-hhhcCCeeeeeccc
Confidence 478999997653 2233444455567777777776679999 9999775 78899999999999
Q ss_pred cccCchhhcccccCCCCCCCCC
Q 022496 64 RSFTSPKAASFSSGTEGSSPGG 85 (296)
Q Consensus 64 ~~~~~~e~~~~~~~~~~i~~~~ 85 (296)
+++++|+.++|.+++|+||+|.
T Consensus 105 ~l~~~f~~a~~~l~~GeiS~pv 126 (139)
T 1j6y_A 105 QMQKPFEEATYALKVGDISDIV 126 (139)
T ss_dssp SSCTHHHHHHHHCCSSSCCSCE
T ss_pred ccCHHHHHHHHcCCCCCccccE
Confidence 9999999999999999999875
No 90
>2pv1_A Chaperone SURA; surviVal protein A, peptidyl-prolyl CIS-trans isomerase domain, peptide, complex; 1.30A {Escherichia coli} SCOP: d.26.1.1 PDB: 2pv2_A
Probab=98.63 E-value=1.1e-09 Score=81.43 Aligned_cols=82 Identities=9% Similarity=-0.117 Sum_probs=67.0
Q ss_pred ccccccCCchhh----hhccccccccccccCCccccccCCchhH-HhhhhccCCCCCCCceeeeecccccCchhhccccc
Q 022496 2 MLRASQLASPVL----CAITQSLIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSS 76 (296)
Q Consensus 2 ~~~~~~~~~~~~----~~~~~~~~~~~~~~r~~~~~~~~~f~~l-~~~s~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~ 76 (296)
.+|.+||+-+.+ ++.+.......++++..+..|. .|+.+ ++||+++ ++.+||++||+..+.+.++|+.+.|.+
T Consensus 2 ~~~~~hIli~~~~~~~~~~~~~a~~~a~~i~~~l~~g~-~F~~lA~~~S~~~-s~~~gG~lg~~~~~~l~~~f~~a~~~l 79 (103)
T 2pv1_A 2 ELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGA-DFGKLAIAHSADQ-QALNGGQMGWGRIQELPGIFAQALSTA 79 (103)
T ss_dssp CEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHTTC-CHHHHHHHHCCST-TGGGTTEEEEECGGGSCHHHHHHTTTC
T ss_pred cEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC-CHHHHHHHhCCCc-ccccCCccceEchhhcCHHHHHHHHcC
Confidence 368899986643 3444445566677777776774 89999 9999997 789999999999999999999999999
Q ss_pred CCCCCCCCC
Q 022496 77 GTEGSSPGG 85 (296)
Q Consensus 77 ~~~~i~~~~ 85 (296)
++|+||+|.
T Consensus 80 ~~G~is~pv 88 (103)
T 2pv1_A 80 KKGDIVGPI 88 (103)
T ss_dssp CTTCEEEEE
T ss_pred CCCCeeccE
Confidence 999999774
No 91
>2jzv_A Foldase protein PRSA; ppiase, parvulin, proline isomerase, lipoprotein, membrane, palmitate, rotamase; NMR {Staphylococcus aureus}
Probab=98.62 E-value=7.3e-10 Score=83.56 Aligned_cols=84 Identities=10% Similarity=-0.091 Sum_probs=67.4
Q ss_pred ccccccCCchhhhhc-------cccccccccccCCccccccCCchhH-HhhhhccCCCCCCCceeeeecccccCchhhcc
Q 022496 2 MLRASQLASPVLCAI-------TQSLIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAAS 73 (296)
Q Consensus 2 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~r~~~~~~~~~f~~l-~~~s~~~~~~~~~~~l~~~~~~~~~~~~e~~~ 73 (296)
.+|.+||+-+.+... +.......++++..+..|...|+.+ ++||+++.++.+||+|||+..+++.++|+.+.
T Consensus 7 ~~~~~hIli~~~~~~~~~~~~~~~~~~~~a~~i~~~l~~g~~~F~~lA~~~S~d~~s~~~gG~lG~~~~~~l~~~f~~a~ 86 (111)
T 2jzv_A 7 SKKASHILIKVKSKKSDKEGLDDKEAKQKAEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDKDFEKAL 86 (111)
T ss_dssp EEEEEEEEEEBCSCSSCSSSBCHHHHHHHHHHHHHHHHSCTTSHHHHHHHHCSCHHHHTTTTEEEEEETTSSCHHHHHHH
T ss_pred EEEEEEEEEECCCCCChhhhhhHHHHHHHHHHHHHHHHcCcccHHHHHHHHCCCcchhhhCCccceecCCcccHHHHHHH
Confidence 368899986644221 2223445566777777774589999 99999998999999999999999999999999
Q ss_pred cccCCCCCCCCC
Q 022496 74 FSSGTEGSSPGG 85 (296)
Q Consensus 74 ~~~~~~~i~~~~ 85 (296)
|.+++|+||.|.
T Consensus 87 ~~l~~G~is~pv 98 (111)
T 2jzv_A 87 FKLKDGEVSEVV 98 (111)
T ss_dssp HTCCTTCBCCCE
T ss_pred HhCCCCCcCccE
Confidence 999999999874
No 92
>1yw5_A Peptidyl prolyl CIS/trans isomerase; WW-domain, ppiase domain, ordered linker; 1.60A {Candida albicans}
Probab=98.59 E-value=1.4e-09 Score=88.83 Aligned_cols=83 Identities=13% Similarity=-0.025 Sum_probs=65.7
Q ss_pred ccccccCCchhhhh--------------ccccccccccccCCccccccCCchhH-HhhhhccCCCCCCCceeeeeccccc
Q 022496 2 MLRASQLASPVLCA--------------ITQSLIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSF 66 (296)
Q Consensus 2 ~~~~~~~~~~~~~~--------------~~~~~~~~~~~~r~~~~~~~~~f~~l-~~~s~~~~~~~~~~~l~~~~~~~~~ 66 (296)
.+|++||+-+.... .+......+++++..+..|...|+.| ++||.+ .++.+||+|||+..+++.
T Consensus 67 ~~~~~hIlv~~~~~~~p~~~~~~~~~~~~~~~A~~~~~~i~~~l~~G~~~F~~lA~~~S~~-~sa~~GGdLG~~~~~~l~ 145 (177)
T 1yw5_A 67 QVRVSHLLIKNNQSRKPKSWKSPDGISRTRDESIQILKKHLERILSGEVKLSELANTESDC-SSHDRGGDLGFFSKGQMQ 145 (177)
T ss_dssp CEEEEEEEECCTTSSSCCBTTBTTCCCCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHCCS-GGGGGTTEEEEECTTSSC
T ss_pred eEEEEEEEEecCCccCcccccccccchhHHHHHHHHHHHHHHHHHcCchhHHHHHHHhCCC-cchhcCCccceecccccC
Confidence 37889998765321 13333344556667677776679999 999977 588999999999999999
Q ss_pred CchhhcccccCCCCCCCCC
Q 022496 67 TSPKAASFSSGTEGSSPGG 85 (296)
Q Consensus 67 ~~~e~~~~~~~~~~i~~~~ 85 (296)
++|+.++|.+++|+||.|.
T Consensus 146 ~~f~~a~f~L~~GeiS~pv 164 (177)
T 1yw5_A 146 PPFEEAAFNLHVGEVSNII 164 (177)
T ss_dssp HHHHHHHHTSCTTCBCCCE
T ss_pred HHHHHHHHcCCCCCcCCeE
Confidence 9999999999999999885
No 93
>1zk6_A Foldase protein PRSA; alpha/beta structure, isomerase; NMR {Bacillus subtilis}
Probab=98.57 E-value=8.1e-09 Score=75.18 Aligned_cols=73 Identities=15% Similarity=-0.007 Sum_probs=60.8
Q ss_pred cccccCCchhhhhccccccccccccCCccccccCCchhH-HhhhhccCCCCCCCceeeee-cccccCchhhcccccCCCC
Q 022496 3 LRASQLASPVLCAITQSLIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHI-ISRSFTSPKAASFSSGTEG 80 (296)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~f~~l-~~~s~~~~~~~~~~~l~~~~-~~~~~~~~e~~~~~~~~~~ 80 (296)
++.+||+-+. ....++++..+..|. .|+.+ ++||+++ ++.+||++||+. .+++.++|+.+.|.+++|+
T Consensus 5 ~~~~hIl~~~--------~~~A~~i~~~l~~g~-~F~~lA~~~S~~~-s~~~gG~lg~~~~~~~l~~~f~~a~~~l~~G~ 74 (93)
T 1zk6_A 5 IRASHILVAD--------KKTAEEVEKKLKKGE-KFEDLAKEYSTDS-SASKGGDLGWFAKEGQMDETFSKAAFKLKTGE 74 (93)
T ss_dssp EEEEEEEESS--------HHHHHHHHHHHHHTC-CHHHHHHHHCCSG-GGGGTTEEEEECTTTSSCTTHHHHHHHSCTTC
T ss_pred EEEEEEEecc--------HHHHHHHHHHHHCCC-CHHHHHHHhCCCc-hhhhCCeeeeecccccCCHHHHHHHHcCCCCC
Confidence 5788887652 233455666666674 89999 9999999 889999999999 9999999999999999999
Q ss_pred CCCCC
Q 022496 81 SSPGG 85 (296)
Q Consensus 81 i~~~~ 85 (296)
||.|.
T Consensus 75 is~pv 79 (93)
T 1zk6_A 75 VSDPV 79 (93)
T ss_dssp BCCCE
T ss_pred ccceE
Confidence 99874
No 94
>2kgj_A Peptidyl-prolyl CIS-trans isomerase D; prolyl isomerase, parvulin, cell inner membrane, cell membrane, membrane, rotamase, stress response; NMR {Escherichia coli}
Probab=98.56 E-value=1.4e-09 Score=80.73 Aligned_cols=76 Identities=9% Similarity=-0.195 Sum_probs=61.6
Q ss_pred ccccccCCchhhhhccccccccccccCCccccccCCchhH-HhhhhccCCCCCCCceeeeecccccCchhhcccccCCCC
Q 022496 2 MLRASQLASPVLCAITQSLIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEG 80 (296)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~f~~l-~~~s~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~ 80 (296)
.+|++||+-.. ......++++..+..|. .|+.+ ++||+++.++.+||+|||+..+.+.++|+.++|. ++|+
T Consensus 3 ~~~~~hIl~~~------~~~~~A~~i~~~l~~G~-~F~~lA~~~S~d~~sa~~GGdlG~~~~~~l~~~f~~a~~~-~~Ge 74 (102)
T 2kgj_A 3 PQRTRYSIIQT------KTEDEAKAVLDELNKGG-DFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLK-EKGQ 74 (102)
T ss_dssp CCEEEEEEEEE------SSHHHHHHHHHHHHHTS-CHHHHHHHTCTTHHHHTTTSEEEEEETTCCCHHHHTTCCC-STTC
T ss_pred EEEEEeeecCh------hhHHHHHHHHHHHHCCC-CHHHHHHHhCCCchhhhcCCccceecccccCHHHHHHHhc-CCCC
Confidence 36788998321 11344456666666674 89999 9999999899999999999999999999999999 9999
Q ss_pred CCCCC
Q 022496 81 SSPGG 85 (296)
Q Consensus 81 i~~~~ 85 (296)
||+|.
T Consensus 75 iS~pv 79 (102)
T 2kgj_A 75 LSGVI 79 (102)
T ss_dssp EEEEE
T ss_pred ccccE
Confidence 98774
No 95
>2rqs_A Parvulin-like peptidyl-prolyl isomerase; CIS/trans isomerisation, cenarcheaum symbiosum, low temperat NIMA-kinase, PIN1, cell cycle; NMR {Cenarchaeum symbiosum}
Probab=98.55 E-value=8.3e-09 Score=75.77 Aligned_cols=74 Identities=9% Similarity=-0.075 Sum_probs=61.4
Q ss_pred cccccCCchhhhhccccccccccccCCccccccCCchhH-HhhhhccCCCCCCCceeeeecccccCchhhcccccCCCCC
Q 022496 3 LRASQLASPVLCAITQSLIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGS 81 (296)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~f~~l-~~~s~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~i 81 (296)
++.+||+-+. ....+++++.+..|. .|+.+ ++||+|..++.+||++||+..+.+.++|+.+.|.+++|+|
T Consensus 10 ~~~~hIl~~~--------~~~A~~i~~~l~~g~-~F~~lA~~~S~d~~s~~~GG~lG~~~~~~l~~~f~~a~~~l~~G~i 80 (97)
T 2rqs_A 10 IKCSHILVKK--------QGEALAVQERLKAGE-KFGKLAKELSIDGGSAKRDGSLGYFGRGKMVKPFEDAAFRLQVGEV 80 (97)
T ss_dssp EEEEEEEESC--------HHHHHHHHHHHTTTC-CHHHHHHHTCCCCGGGGGTTEEEEECTTSSCHHHHHHHTTCTTSCB
T ss_pred EEEEEEEeCC--------HHHHHHHHHHHHCCC-CHHHHHHHhCCCCcchhcCceeeeEcCCCCCHHHHHHHHcCCCCCc
Confidence 6788887652 223355556566664 89999 9999999999999999999999999999999999999999
Q ss_pred CCCC
Q 022496 82 SPGG 85 (296)
Q Consensus 82 ~~~~ 85 (296)
|+|.
T Consensus 81 s~pv 84 (97)
T 2rqs_A 81 SEPV 84 (97)
T ss_dssp CCCE
T ss_pred cccE
Confidence 9874
No 96
>1jns_A Peptidyl-prolyl CIS-trans isomerase C; alpha-beta sandwich, CIS peptide bond; NMR {Escherichia coli} SCOP: d.26.1.1 PDB: 1jnt_A
Probab=98.50 E-value=7.2e-09 Score=75.33 Aligned_cols=73 Identities=4% Similarity=-0.199 Sum_probs=60.2
Q ss_pred cccccCCchhhhhccccccccccccCCccccccCCchhH-HhhhhccCCCCCCCceeeeecccccCchhhcccccCCCCC
Q 022496 3 LRASQLASPVLCAITQSLIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGS 81 (296)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~f~~l-~~~s~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~i 81 (296)
+|++||+-+.. ...++++..+..|. .|+.+ ++||.++ ++.+||+|||+..+++.++|+.+.|.+++|+|
T Consensus 4 ~~~~hIl~~~~--------~~A~~i~~~l~~g~-~F~~lA~~~S~~~-s~~~gGdlg~~~~~~l~~~f~~a~~~l~~G~i 73 (92)
T 1jns_A 4 AAALHILVKEE--------KLALDLLEQIKNGA-DFGKLAKKHSICP-SGKRGGDLGEFRQGQMVPAFDKVVFSCPVLEP 73 (92)
T ss_dssp EEEEEEEESSH--------HHHHHHHHHHHHTC-CHHHHHHHHHCST-TTTTGGGCCEEETTSSCHHHHHHHHHSCTTCC
T ss_pred EEEEEEEeCCH--------HHHHHHHHHHHCCC-CHHHHHHHhCCCc-chhcCCeeeEEcCcccCHHHHHHHHhCCCCCc
Confidence 67888876543 23455666666675 89999 9999875 78999999999999999999999999999999
Q ss_pred CCCC
Q 022496 82 SPGG 85 (296)
Q Consensus 82 ~~~~ 85 (296)
|+|.
T Consensus 74 s~pv 77 (92)
T 1jns_A 74 TGPL 77 (92)
T ss_dssp EEEE
T ss_pred CCcE
Confidence 9774
No 97
>3ui4_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; peptidyl-prolyl-isomerase; 0.80A {Homo sapiens} SCOP: d.26.1.1 PDB: 3ui5_A 3ui6_A 1fjd_A 1eq3_A
Probab=98.38 E-value=2.9e-08 Score=73.38 Aligned_cols=70 Identities=9% Similarity=0.034 Sum_probs=56.9
Q ss_pred cccccCCchhhhhccccccccccccCCccccccCCchhH-HhhhhccCCCCCCCceeeeecccccCchhhcccccCCCCC
Q 022496 3 LRASQLASPVLCAITQSLIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGS 81 (296)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~f~~l-~~~s~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~i 81 (296)
++++||+-+.. ...+++.+.+..|. +|+.+ ++||+|+ +.+||+|||+..+++.++|+.++|.+++|+|
T Consensus 8 v~~~~Ilv~~~--------~~A~~i~~~l~~G~-~F~~lA~~~S~d~--a~~GGdlG~~~~~~l~~~f~~a~~~l~~G~v 76 (101)
T 3ui4_A 8 VKVRHILCEKH--------GKIMEAMEKLKSGM-RFNEVAAQYSEDK--ARQGGDLGWMTRGSMVGPFQEAAFALPVSGM 76 (101)
T ss_dssp EEEEEEEESSH--------HHHHHHHHHHHTTC-CHHHHHHHHCSSS--GGGTTEEEEEETTSSCHHHHHHHHTSCCCBT
T ss_pred EEEEEEEECCH--------HHHHHHHHHHHCCC-CHHHHHHHhCcCc--hhcCCceeeEcCCCCCHHHHHHHHhCCCCCC
Confidence 67888886621 22344555555664 89999 9999984 7899999999999999999999999999999
Q ss_pred CC
Q 022496 82 SP 83 (296)
Q Consensus 82 ~~ 83 (296)
|+
T Consensus 77 s~ 78 (101)
T 3ui4_A 77 DK 78 (101)
T ss_dssp TB
T ss_pred cc
Confidence 96
No 98
>3nrk_A LIC12922; NC domain, parvulin domain, SURA homology, probable chaperon unknown function; 3.10A {Leptospira interrogans serovar copenhaorganism_taxid}
Probab=97.64 E-value=1.3e-06 Score=78.07 Aligned_cols=90 Identities=10% Similarity=-0.080 Sum_probs=66.7
Q ss_pred ccccCCc-hhh---hhccccccccccccCCc-cccccCCchhH-HhhhhccCCCCCCCceeeeeccccc---Cchhhccc
Q 022496 4 RASQLAS-PVL---CAITQSLIPTLNLSSSS-SLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSF---TSPKAASF 74 (296)
Q Consensus 4 ~~~~~~~-~~~---~~~~~~~~~~~~~~r~~-~~~~~~~f~~l-~~~s~~~~~~~~~~~l~~~~~~~~~---~~~e~~~~ 74 (296)
+.+||+- +.+ .+. .......+.++.. +..|. .|+.+ ++||.++.++.+||++||+..+.++ ++|+.+.|
T Consensus 161 ~~~~Ili~~~~~~~~~~-~~~~~~a~~i~~~~l~~g~-~F~~lA~~~S~d~~s~~~gG~lg~~~~~~l~~~~~~~~~a~~ 238 (325)
T 3nrk_A 161 RYRIISIAPENDSIQEE-NRLYKEVSEIRKSILADPS-SFALIAGSPRNDPALRARRGMVEWISSFDLYKYSKITATIAA 238 (325)
T ss_dssp EEEEEEECCSSSCHHHH-HHHHHHHHHHHHHHHHCTT-HHHHHHHSTTSCHHHHHTTTEEEEEEHHHHHHHCHHHHHHHT
T ss_pred EEEEEEEecCCCCccch-HHHHHHHHHHHHHHHhCCC-CHHHHHHHhCCCccccccCCcccccccccccccCHHHHHHHH
Confidence 5567765 222 111 2334445666666 66775 99999 9999999998999999999999999 99999999
Q ss_pred ccCCCCCCCCCCCc--eEEEeeE
Q 022496 75 SSGTEGSSPGGGDR--EILVQHL 95 (296)
Q Consensus 75 ~~~~~~i~~~~~~~--~~~~~~I 95 (296)
.+++|+||+|.... -+|+-.+
T Consensus 239 ~l~~Geis~pv~t~~~G~hIikv 261 (325)
T 3nrk_A 239 PLPNGGVSEVFRDERKRYCILKI 261 (325)
T ss_dssp TCCTTCBCCCEECTTSCEEEEEE
T ss_pred cCCCCCCCceEEeCCCeEEEEEE
Confidence 99999999884332 3544444
No 99
>3rfw_A Cell-binding factor 2; SURA-like, chaperone; 2.20A {Campylobacter jejuni}
Probab=97.59 E-value=3e-06 Score=72.84 Aligned_cols=61 Identities=8% Similarity=-0.120 Sum_probs=51.2
Q ss_pred CCchhH-HhhhhccCCCCCCCceeeeecccccCchhhcccccCCCCCCC-CC-CCceEEEeeEe
Q 022496 36 QKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGSSP-GG-GDREILVQHLL 96 (296)
Q Consensus 36 ~~f~~l-~~~s~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~i~~-~~-~~~~~~~~~Il 96 (296)
..|+.+ ++||.++.++.+||++||+..+++.++|+.+.|.+++|++|+ |. .+.-+|+-.+.
T Consensus 143 ~~F~~lA~~~S~~~~~~~~gGdlg~~~~~~l~~~f~~a~~~l~~G~is~~pv~t~~G~hii~v~ 206 (252)
T 3rfw_A 143 AKFSELAKEKSIDPGSKNQGGELGWFDQSTMVKPFTDAAFALKNGTITTTPVKTNFGYHVILKE 206 (252)
T ss_dssp HHHHHHHHHHCCCTTTGGGTTEEEEECSSSSCHHHHHHHHHSCTTEECSSCEEETTEEEEEEEE
T ss_pred ccHHHHHHHhCCCCchhhcCCcccccccccccHHHHHHHHcCCCCCccCceEEECCEEEEEEEE
Confidence 379999 999999998888999999999999999999999999999994 63 33445554443
No 100
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=97.18 E-value=0.00021 Score=56.64 Aligned_cols=82 Identities=13% Similarity=0.154 Sum_probs=48.5
Q ss_pred CCHHHHHHHhcCCCCCCCcEEEecCChHH------------HHhh-CCCCceecccccccCCC---CCccCCC-CCCCcE
Q 022496 188 IQPDELHKKMQDPNFHKEAQLIDVREPEE------------VALS-SLPGFQVLPLRQFGSWG---PDITVKF-DPQKDT 250 (296)
Q Consensus 188 is~~ev~~~L~~~~~~~~~~llDvR~~~e------------y~~g-hIpgA~~ip~~~l~~~~---~~~~~~~-~~~~~i 250 (296)
++.+++..+...+ -..+||+|++.| +..+ +|+|.+|+|+....-.. ..+...+ ..+++|
T Consensus 30 ~~~~d~~~L~~~G----i~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~~iPv~~~~~~~~~~~~~~~~l~~~~~pV 105 (156)
T 2f46_A 30 LTKADAEQIAQLG----IKTIICNRPDREEESQPDFAQIKQWLEQAGVTGFHHQPVTARDIQKHDVETFRQLIGQAEYPV 105 (156)
T ss_dssp CCGGGHHHHHHHT----CCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEEECCCCTTTCCHHHHHHHHHHHHTSCSSE
T ss_pred CCHHHHHHHHHCC----CCEEEECCCCccccCCCcHHHHHHHHHHCCCHhheECccCCCCCCHHHHHHHHHHHHhCCCCE
Confidence 4455555444332 347999997755 3334 59889999986531000 0001111 247899
Q ss_pred EEEeCCChhHHHHHHH-HHHcCCC
Q 022496 251 YVMCHHGMRSLQVAQW-LQTQGFR 273 (296)
Q Consensus 251 v~~C~~G~rs~~aa~~-L~~~G~~ 273 (296)
+|||.+|.|+..++.. |...|.+
T Consensus 106 lvHC~sG~Rs~~l~al~l~~~g~~ 129 (156)
T 2f46_A 106 LAYCRTGTRCSLLWGFRRAAEGMP 129 (156)
T ss_dssp EEECSSSHHHHHHHHHHHHHTTCC
T ss_pred EEECCCCCCHHHHHHHHHHHcCCC
Confidence 9999999998755443 3445654
No 101
>3rgc_A Possible periplasmic protein; ppiase, chaperone; 2.30A {Campylobacter jejuni}
Probab=89.97 E-value=0.3 Score=41.23 Aligned_cols=55 Identities=7% Similarity=-0.164 Sum_probs=40.8
Q ss_pred HhhhhccCCCCCCCceeeeecccccCchhhcccccCCCCCCCCC-CCceEEEeeEee
Q 022496 42 ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGSSPGG-GDREILVQHLLV 97 (296)
Q Consensus 42 ~~~s~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~i~~~~-~~~~~~~~~Il~ 97 (296)
.+..+....+ .+|++||+..+.+.++|+.+.|.+++|++|+|. .+..+|+-.+.=
T Consensus 150 ~~l~~g~~f~-l~g~lg~~~~~~l~~~~~~a~~~l~~G~is~pv~t~~G~hiikv~~ 205 (252)
T 3rgc_A 150 ENIKNTKKTI-LKPQNASLNTSNADPRLLGLLSQIPVGSFSPVLNGKNGYELYEVKS 205 (252)
T ss_dssp HHHHHHCCCC-SCCEEEEEETTTSCHHHHHHHHHSCTTCBCCCBTTTTCEEEEEEEE
T ss_pred HHHHhCCCcc-cccccceecHHhcCHHHHHHHHcCCCCCcCCcEEeCCeEEEEEEec
Confidence 3444444444 689999999999999999999999999999874 444455544443
No 102
>1v8c_A MOAD related protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, protein binding; 1.60A {Thermus thermophilus} SCOP: d.15.3.1 d.129.5.1
Probab=86.30 E-value=0.083 Score=42.07 Aligned_cols=26 Identities=19% Similarity=0.281 Sum_probs=22.9
Q ss_pred cEEEecCChHHHHhhCCCCceecccccccC
Q 022496 206 AQLIDVREPEEVALSSLPGFQVLPLRQFGS 235 (296)
Q Consensus 206 ~~llDvR~~~ey~~ghIpgA~~ip~~~l~~ 235 (296)
..+||||++.||. |||+|||...+.-
T Consensus 122 ~~liDvRe~~E~~----pgA~~iprg~lE~ 147 (168)
T 1v8c_A 122 GAVVRFREVEPLK----VGSLSIPQLRVEV 147 (168)
T ss_dssp TEEEEEEEEEEEE----ETTEEEEEEEEEE
T ss_pred eEEEECCChhhcC----CCCEEcChhHHHH
Confidence 4899999999999 9999999887654
No 103
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=83.47 E-value=0.49 Score=36.06 Aligned_cols=68 Identities=24% Similarity=0.356 Sum_probs=38.0
Q ss_pred cEEEecCChHHHHhhCCCC--ceecccccccCCCCC--------ccCCCCCCCcEEEEeCCCh-hHH-HHHHHHH-HcCC
Q 022496 206 AQLIDVREPEEVALSSLPG--FQVLPLRQFGSWGPD--------ITVKFDPQKDTYVMCHHGM-RSL-QVAQWLQ-TQGF 272 (296)
Q Consensus 206 ~~llDvR~~~ey~~ghIpg--A~~ip~~~l~~~~~~--------~~~~~~~~~~iv~~C~~G~-rs~-~aa~~L~-~~G~ 272 (296)
..++|+|...+......+| .+++|+.+....... +...+..+.+|+|+|..|. ||. .++..|. ..|.
T Consensus 37 ~~Vi~l~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i~~~~~~~~~vlVHC~~G~~Rsg~~~a~~l~~~~~~ 116 (150)
T 4erc_A 37 RHLVSLTERGPPHSDSCPGLTLHRLRIPDFCPPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLACYLVKERGL 116 (150)
T ss_dssp EEEEECSSSCCTTGGGCTTSEEEECCCCTTSCCCHHHHHHHHHHHHHHHHTTCEEEEECSSSSHHHHHHHHHHHHHHHTC
T ss_pred CEEEEcCCCCCCcccccCCceEEEEecCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 4789999875543333344 345665544211000 0001235689999999985 886 4454444 4676
Q ss_pred C
Q 022496 273 R 273 (296)
Q Consensus 273 ~ 273 (296)
+
T Consensus 117 ~ 117 (150)
T 4erc_A 117 A 117 (150)
T ss_dssp C
T ss_pred C
Confidence 4
No 104
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=72.56 E-value=3.1 Score=31.40 Aligned_cols=28 Identities=25% Similarity=0.288 Sum_probs=20.1
Q ss_pred CCCcEEEEeCCC-hhHHH-H-HHHHHHcCCC
Q 022496 246 PQKDTYVMCHHG-MRSLQ-V-AQWLQTQGFR 273 (296)
Q Consensus 246 ~~~~iv~~C~~G-~rs~~-a-a~~L~~~G~~ 273 (296)
.+.+|+|+|..| .||.. + +..+...|++
T Consensus 80 ~~~~VlVHC~~G~~RS~~~v~ayLm~~~~~~ 110 (145)
T 2nt2_A 80 HGSKCLVHSKMGVSRSASTVIAYAMKEYGWN 110 (145)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHHHCCC
T ss_pred cCCeEEEECCCCCchHHHHHHHHHHHHhCCC
Confidence 578999999999 78863 3 4445556764
No 105
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=70.14 E-value=4.3 Score=31.34 Aligned_cols=28 Identities=29% Similarity=0.472 Sum_probs=20.3
Q ss_pred CCCcEEEEeCCC-hhHHHH--HHHHHHcCCC
Q 022496 246 PQKDTYVMCHHG-MRSLQV--AQWLQTQGFR 273 (296)
Q Consensus 246 ~~~~iv~~C~~G-~rs~~a--a~~L~~~G~~ 273 (296)
.+.+|+|+|..| .||..+ +..+...|++
T Consensus 88 ~~~~VlVHC~aG~~RSg~~~~ayLm~~~~~~ 118 (164)
T 2hcm_A 88 DGGSCLVYCKNGRSRSAAVCTAYLMRHRGHS 118 (164)
T ss_dssp TTCEEEEEESSSSHHHHHHHHHHHHHHSCCC
T ss_pred cCCEEEEECCCCCchHHHHHHHHHHHHhCCC
Confidence 578999999999 788743 3445556764
No 106
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=69.58 E-value=4.5 Score=30.66 Aligned_cols=28 Identities=25% Similarity=0.331 Sum_probs=20.6
Q ss_pred CCCcEEEEeCCC-hhHH-HHHH-HHHHcCCC
Q 022496 246 PQKDTYVMCHHG-MRSL-QVAQ-WLQTQGFR 273 (296)
Q Consensus 246 ~~~~iv~~C~~G-~rs~-~aa~-~L~~~G~~ 273 (296)
.+.+|+|+|..| .||. .++. .|...|++
T Consensus 84 ~~~~vlVHC~aG~~RSg~~~~ayl~~~~~~~ 114 (151)
T 2e0t_A 84 PGGKILVHCAVGVSRSATLVLAYLMLYHHLT 114 (151)
T ss_dssp TTCCEEEECSSSSHHHHHHHHHHHHHHSCCC
T ss_pred CCCcEEEECCCCCChHHHHHHHHHHHHcCCC
Confidence 578999999999 7887 4444 44556764
No 107
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=68.74 E-value=4.1 Score=31.58 Aligned_cols=29 Identities=21% Similarity=0.391 Sum_probs=20.3
Q ss_pred CCCCcEEEEeCCC-hhHHHH-HHH-HHHcCCC
Q 022496 245 DPQKDTYVMCHHG-MRSLQV-AQW-LQTQGFR 273 (296)
Q Consensus 245 ~~~~~iv~~C~~G-~rs~~a-a~~-L~~~G~~ 273 (296)
..+.+|+|+|..| .||..+ +.+ +...|.+
T Consensus 81 ~~~~~VlVHC~aG~~RSg~~~~ayLm~~~~~~ 112 (165)
T 1wrm_A 81 LRGESCLVHCLAGVSRSVTLVIAYIMTVTDFG 112 (165)
T ss_dssp HTTCEEEEECSSSSSHHHHHHHHHHHHTSSCC
T ss_pred HCCCeEEEECCCCCChhHHHHHHHHHHHcCCC
Confidence 3578999999999 788753 444 4445654
No 108
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=68.57 E-value=4.3 Score=30.89 Aligned_cols=28 Identities=25% Similarity=0.347 Sum_probs=20.0
Q ss_pred CCCcEEEEeCCC-hhHHH-HHHHH-HHcCCC
Q 022496 246 PQKDTYVMCHHG-MRSLQ-VAQWL-QTQGFR 273 (296)
Q Consensus 246 ~~~~iv~~C~~G-~rs~~-aa~~L-~~~G~~ 273 (296)
.+.+|+|+|..| .||.. ++.+| ...|.+
T Consensus 89 ~~~~vlvHC~aG~~RS~~~~~ayl~~~~~~~ 119 (154)
T 2r0b_A 89 MGGKVLVHGNAGISRSAAFVIAYIMETFGMK 119 (154)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHHTCC
T ss_pred cCCCEEEEcCCCCChHHHHHHHHHHHHcCCC
Confidence 578999999999 78874 33444 456764
No 109
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=67.88 E-value=5 Score=30.32 Aligned_cols=28 Identities=21% Similarity=0.409 Sum_probs=20.1
Q ss_pred CCCcEEEEeCCC-hhHHHH-HHHH-HHcCCC
Q 022496 246 PQKDTYVMCHHG-MRSLQV-AQWL-QTQGFR 273 (296)
Q Consensus 246 ~~~~iv~~C~~G-~rs~~a-a~~L-~~~G~~ 273 (296)
.+.+|+|+|..| .||..+ +.+| ...|.+
T Consensus 82 ~~~~VlVHC~~G~~RSg~~~~ayl~~~~~~~ 112 (149)
T 1zzw_A 82 CGKGLLIHCQAGVSRSATIVIAYLMKHTRMT 112 (149)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHHSCCC
T ss_pred cCCeEEEECCCCCCHHHHHHHHHHHHHcCCC
Confidence 578999999999 788754 4344 456764
No 110
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=67.65 E-value=3.6 Score=31.20 Aligned_cols=28 Identities=14% Similarity=0.232 Sum_probs=20.2
Q ss_pred CCCcEEEEeCCCh-hHHHH-HHHHHHcCCC
Q 022496 246 PQKDTYVMCHHGM-RSLQV-AQWLQTQGFR 273 (296)
Q Consensus 246 ~~~~iv~~C~~G~-rs~~a-a~~L~~~G~~ 273 (296)
.+.+|+|+|..|. ||..+ |..|...|.+
T Consensus 91 ~~~~vlvHC~aG~~RTg~~~a~~l~~~g~~ 120 (151)
T 1xri_A 91 KNHPVLIHCKRGKHRTGCLVGCLRKLQKWC 120 (151)
T ss_dssp GGCSEEEECSSSSSHHHHHHHHHHHHTTBC
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHhCCC
Confidence 4789999999994 77644 5555566764
No 111
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=67.63 E-value=4.8 Score=30.91 Aligned_cols=28 Identities=21% Similarity=0.268 Sum_probs=20.1
Q ss_pred CCCcEEEEeCCC-hhHHH-HHH-HHHHcCCC
Q 022496 246 PQKDTYVMCHHG-MRSLQ-VAQ-WLQTQGFR 273 (296)
Q Consensus 246 ~~~~iv~~C~~G-~rs~~-aa~-~L~~~G~~ 273 (296)
.+.+|+|+|..| .||.. ++. .+...|.+
T Consensus 83 ~~~~VlVHC~aG~~RSg~~~~aylm~~~~~~ 113 (160)
T 1yz4_A 83 NGGNCLVHSFAGISRSTTIVTAYVMTVTGLG 113 (160)
T ss_dssp TTCCEEEEETTSSSHHHHHHHHHHHHHHCCC
T ss_pred cCCeEEEECCCCCchHHHHHHHHHHHHcCCC
Confidence 578999999999 78873 334 44556764
No 112
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=66.83 E-value=5.2 Score=31.84 Aligned_cols=28 Identities=25% Similarity=0.356 Sum_probs=20.4
Q ss_pred CCCcEEEEeCCC-hhHHH-H-HHHHHHcCCC
Q 022496 246 PQKDTYVMCHHG-MRSLQ-V-AQWLQTQGFR 273 (296)
Q Consensus 246 ~~~~iv~~C~~G-~rs~~-a-a~~L~~~G~~ 273 (296)
.+.+|+|+|..| .||.. + |..+...|++
T Consensus 96 ~~~~VLVHC~aG~sRS~~vv~ayLm~~~~~s 126 (188)
T 2esb_A 96 KQGRTLLHCAAGVSRSAALCLAYLMKYHAMS 126 (188)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHSCCC
T ss_pred cCCEEEEECCCCCchHHHHHHHHHHHHcCCC
Confidence 578999999999 78873 3 4444556764
No 113
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=65.27 E-value=5.3 Score=30.30 Aligned_cols=28 Identities=32% Similarity=0.553 Sum_probs=19.8
Q ss_pred CCCcEEEEeCCCh-hHHHH-HHHH-HHcCCC
Q 022496 246 PQKDTYVMCHHGM-RSLQV-AQWL-QTQGFR 273 (296)
Q Consensus 246 ~~~~iv~~C~~G~-rs~~a-a~~L-~~~G~~ 273 (296)
.+.+|+|+|..|. ||..+ +..| ...|.+
T Consensus 88 ~~~~vlVHC~~G~~Rsg~~~~a~l~~~~~~~ 118 (157)
T 3rgo_A 88 LGQCVYVHCKAGRSRSATMVAAYLIQVHNWS 118 (157)
T ss_dssp TTCEEEEESSSSSSHHHHHHHHHHHHHHTCC
T ss_pred CCCEEEEECCCCCChHHHHHHHHHHHHcCCC
Confidence 5689999999995 88754 4444 446764
No 114
>2jgn_A DBX, DDX3, ATP-dependent RNA helicase DDX3X; phosphorylation, nucleotide-binding, hydrolase, RNA-binding, ATP-binding, DNA-binding, nuclear protein; 1.91A {Homo sapiens}
Probab=63.79 E-value=7.1 Score=30.82 Aligned_cols=39 Identities=13% Similarity=0.211 Sum_probs=29.6
Q ss_pred CCCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccchHHH
Q 022496 245 DPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHA 284 (296)
Q Consensus 245 ~~~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~ 284 (296)
.++.++|++|++-..+...+..|...|+. +..+.|++..
T Consensus 44 ~~~~k~lVF~~~~~~~~~l~~~L~~~g~~-~~~lhg~~~~ 82 (185)
T 2jgn_A 44 GKDSLTLVFVETKKGADSLEDFLYHEGYA-CTSIHGDRSQ 82 (185)
T ss_dssp -CCSCEEEEESCHHHHHHHHHHHHHTTCC-EEEEC-----
T ss_pred CCCCeEEEEECCHHHHHHHHHHHHHcCCc-eEEEeCCCCH
Confidence 35678999999989999999999999984 8889998753
No 115
>2hjv_A ATP-dependent RNA helicase DBPA; parallel alpha-beta, hydrolase; 1.95A {Bacillus subtilis}
Probab=63.78 E-value=6.4 Score=30.22 Aligned_cols=38 Identities=16% Similarity=0.326 Sum_probs=32.3
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccchHHH
Q 022496 246 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHA 284 (296)
Q Consensus 246 ~~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~ 284 (296)
...++|++|++-..+...+..|...|+. +..+.|++..
T Consensus 34 ~~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~hg~~~~ 71 (163)
T 2hjv_A 34 NPDSCIIFCRTKEHVNQLTDELDDLGYP-CDKIHGGMIQ 71 (163)
T ss_dssp CCSSEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTSCH
T ss_pred CCCcEEEEECCHHHHHHHHHHHHHcCCc-EEEEeCCCCH
Confidence 3568999999999999999999999985 8888998643
No 116
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=63.24 E-value=5 Score=33.69 Aligned_cols=30 Identities=23% Similarity=0.362 Sum_probs=24.4
Q ss_pred CcEEEEeCCCh---hHHHHHHHHHHcCCCceEEc
Q 022496 248 KDTYVMCHHGM---RSLQVAQWLQTQGFRRVFNV 278 (296)
Q Consensus 248 ~~iv~~C~~G~---rs~~aa~~L~~~G~~~v~~l 278 (296)
++|++.|..|+ .+..+|++|...||+ |.++
T Consensus 59 ~~v~VlcG~GNNGGDGlv~AR~L~~~G~~-V~v~ 91 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGDGLVCARHLKLFGYN-PVVF 91 (246)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCC-EEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEE
Confidence 58999999664 667899999999995 6554
No 117
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=63.01 E-value=7.7 Score=31.47 Aligned_cols=30 Identities=23% Similarity=0.316 Sum_probs=25.9
Q ss_pred CcEEEEeCCC-hhHHHHHHHHHHcCCCceEEc
Q 022496 248 KDTYVMCHHG-MRSLQVAQWLQTQGFRRVFNV 278 (296)
Q Consensus 248 ~~iv~~C~~G-~rs~~aa~~L~~~G~~~v~~l 278 (296)
-++-+.|.+. +||..|-..|.+.|| +|..+
T Consensus 26 Lr~avVCaSN~NRSMEAH~~L~k~Gf-~V~Sf 56 (214)
T 4h3k_B 26 LRVAVVSSSNQNRSMEAHNILSKRGF-SVRSF 56 (214)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHTTC-EEEEE
T ss_pred CeEEEECCCCcchhHHHHHHHHHCCC-ceEee
Confidence 3688999865 899999999999999 68776
No 118
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=62.88 E-value=5.1 Score=33.94 Aligned_cols=31 Identities=10% Similarity=0.295 Sum_probs=24.7
Q ss_pred CCcEEEEeCCCh---hHHHHHHHHHHcCCCceEEc
Q 022496 247 QKDTYVMCHHGM---RSLQVAQWLQTQGFRRVFNV 278 (296)
Q Consensus 247 ~~~iv~~C~~G~---rs~~aa~~L~~~G~~~v~~l 278 (296)
.++|++.|..|+ .+..+|++|...||+ |.++
T Consensus 85 ~~~vlVlcG~GNNGGDGlv~AR~L~~~G~~-V~v~ 118 (259)
T 3d3k_A 85 RPTVALLCGPHVKGAQGISCGRHLANHDVQ-VILF 118 (259)
T ss_dssp CCEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEE
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEE
Confidence 358999999664 667899999999995 6544
No 119
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=62.25 E-value=6.6 Score=30.00 Aligned_cols=28 Identities=21% Similarity=0.249 Sum_probs=19.8
Q ss_pred CCCcEEEEeCCC-hhHHH-HHHHH-HHcCCC
Q 022496 246 PQKDTYVMCHHG-MRSLQ-VAQWL-QTQGFR 273 (296)
Q Consensus 246 ~~~~iv~~C~~G-~rs~~-aa~~L-~~~G~~ 273 (296)
.+.+|+|+|..| .||.. ++.+| +..|++
T Consensus 84 ~~~~VlVHC~~G~~RS~~vv~ayLm~~~~~~ 114 (155)
T 2hxp_A 84 QNCGVLVHSLAGVSRSVTVTVAYLMQKLHLS 114 (155)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHHHTCC
T ss_pred cCCcEEEECCCCCchhHHHHHHHHHHHcCCC
Confidence 578999999999 78873 33444 456764
No 120
>1t5i_A C_terminal domain of A probable ATP-dependent RNA helicase; RECA-like fold, PRE-mRNA processing protein; 1.90A {Homo sapiens} SCOP: c.37.1.19
Probab=61.70 E-value=7.2 Score=30.33 Aligned_cols=38 Identities=18% Similarity=0.300 Sum_probs=32.4
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccchHHH
Q 022496 246 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHA 284 (296)
Q Consensus 246 ~~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~ 284 (296)
+..++|++|++-..+...+..|...|+. +..+.|++..
T Consensus 30 ~~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~hg~~~~ 67 (172)
T 1t5i_A 30 EFNQVVIFVKSVQRCIALAQLLVEQNFP-AIAIHRGMPQ 67 (172)
T ss_dssp CCSSEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTSCH
T ss_pred CCCcEEEEECCHHHHHHHHHHHHhcCCC-EEEEECCCCH
Confidence 3568999999999999999999999994 8888998643
No 121
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=61.05 E-value=5.6 Score=34.58 Aligned_cols=31 Identities=10% Similarity=0.270 Sum_probs=24.7
Q ss_pred CCcEEEEeCCC---hhHHHHHHHHHHcCCCceEEc
Q 022496 247 QKDTYVMCHHG---MRSLQVAQWLQTQGFRRVFNV 278 (296)
Q Consensus 247 ~~~iv~~C~~G---~rs~~aa~~L~~~G~~~v~~l 278 (296)
..+|+|.|..| +.+..+|+.|...||. |.++
T Consensus 132 ~~~vlVlcG~GNNGGDGlv~AR~L~~~G~~-V~V~ 165 (306)
T 3d3j_A 132 RPTVALLCGPHVKGAQGISCGRHLANHDVQ-VILF 165 (306)
T ss_dssp CCEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEE
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHCCCc-EEEE
Confidence 35899999966 4667999999999995 6544
No 122
>2rb4_A ATP-dependent RNA helicase DDX25; rossmann fold, structural genomics, structural consortium, SGC, alternative initiation, ATP-binding, devel protein; 2.80A {Homo sapiens}
Probab=60.69 E-value=6.6 Score=30.50 Aligned_cols=37 Identities=14% Similarity=0.229 Sum_probs=32.0
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccchHH
Q 022496 246 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 283 (296)
Q Consensus 246 ~~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~ 283 (296)
+..++|++|++-..+...+..|...|+ .+..+.|++.
T Consensus 33 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~~g~~~ 69 (175)
T 2rb4_A 33 TIGQAIIFCQTRRNAKWLTVEMIQDGH-QVSLLSGELT 69 (175)
T ss_dssp CCSEEEEECSCHHHHHHHHHHHHTTTC-CEEEECSSCC
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCC-cEEEEeCCCC
Confidence 356899999999999999999999998 4888999863
No 123
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=60.68 E-value=5.6 Score=33.79 Aligned_cols=31 Identities=23% Similarity=0.336 Sum_probs=24.8
Q ss_pred CCcEEEEeCCCh---hHHHHHHHHHHcCCCceEEc
Q 022496 247 QKDTYVMCHHGM---RSLQVAQWLQTQGFRRVFNV 278 (296)
Q Consensus 247 ~~~iv~~C~~G~---rs~~aa~~L~~~G~~~v~~l 278 (296)
.++|+|.|..|+ .+..+|+.|...||+ |.++
T Consensus 79 ~~~VlVlcG~GNNGGDGlv~AR~L~~~G~~-V~V~ 112 (265)
T 2o8n_A 79 PPTVLVICGPGNNGGDGLVCARHLKLFGYQ-PTIY 112 (265)
T ss_dssp SCEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEE
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHCCCc-EEEE
Confidence 358999999664 667899999999995 6554
No 124
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=59.40 E-value=7.7 Score=30.89 Aligned_cols=28 Identities=25% Similarity=0.313 Sum_probs=20.1
Q ss_pred CCCcEEEEeCCC-hhHHH-H-HHHHHHcCCC
Q 022496 246 PQKDTYVMCHHG-MRSLQ-V-AQWLQTQGFR 273 (296)
Q Consensus 246 ~~~~iv~~C~~G-~rs~~-a-a~~L~~~G~~ 273 (296)
.+.+|+|+|..| .||.. + +..+...|++
T Consensus 102 ~~~~VlVHC~aG~~RSgtvv~ayLm~~~~~s 132 (190)
T 2wgp_A 102 KHGATLVHCAAGVSRSATLCIAYLMKFHNVC 132 (190)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHHCCC
T ss_pred cCCCEEEECCCCCCHHHHHHHHHHHHHcCCC
Confidence 578999999999 78863 3 4445556764
No 125
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=58.46 E-value=9 Score=28.64 Aligned_cols=28 Identities=21% Similarity=0.236 Sum_probs=19.6
Q ss_pred CCCcEEEEeCCC-hhHH-HHHHHH-HHcCCC
Q 022496 246 PQKDTYVMCHHG-MRSL-QVAQWL-QTQGFR 273 (296)
Q Consensus 246 ~~~~iv~~C~~G-~rs~-~aa~~L-~~~G~~ 273 (296)
.+.+|+|+|..| .||. .++.+| ...|++
T Consensus 80 ~~~~VlVHC~~G~~RS~~~~~aylm~~~~~~ 110 (144)
T 3ezz_A 80 CRGRVLVHSQAGISRSATICLAYLMMKKRVR 110 (144)
T ss_dssp TTCCEEEEESSSSSHHHHHHHHHHHHHHTCC
T ss_pred cCCeEEEECCCCCChhHHHHHHHHHHHcCCC
Confidence 568999999988 4776 444444 446764
No 126
>1fuk_A Eukaryotic initiation factor 4A; helicase, DEAD-box protein, translation; 1.75A {Saccharomyces cerevisiae} SCOP: c.37.1.19
Probab=57.88 E-value=9.6 Score=29.19 Aligned_cols=37 Identities=11% Similarity=0.268 Sum_probs=31.8
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccchHH
Q 022496 246 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 283 (296)
Q Consensus 246 ~~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~ 283 (296)
+..+++++|++-..+...+..|...|+. +..+.|++.
T Consensus 29 ~~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~ 65 (165)
T 1fuk_A 29 SVTQAVIFCNTRRKVEELTTKLRNDKFT-VSAIYSDLP 65 (165)
T ss_dssp TCSCEEEEESSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCCC-EEEEECCCC
Confidence 3568999999999999999999999984 888899864
No 127
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=57.60 E-value=9.1 Score=28.68 Aligned_cols=28 Identities=18% Similarity=0.198 Sum_probs=19.2
Q ss_pred CCCcEEEEeCCC-hhHH-HHHHHH-HHcCCC
Q 022496 246 PQKDTYVMCHHG-MRSL-QVAQWL-QTQGFR 273 (296)
Q Consensus 246 ~~~~iv~~C~~G-~rs~-~aa~~L-~~~G~~ 273 (296)
.+.+|+|+|..| .||. .++.+| ...|++
T Consensus 80 ~~~~VlVHC~~G~sRS~~~v~ayLm~~~~~~ 110 (144)
T 3s4e_A 80 KDGVVLVHSNAGVSRAAAIVIGFLMNSEQTS 110 (144)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHHCCC
T ss_pred cCCeEEEEcCCCCchHHHHHHHHHHHHcCCC
Confidence 578999999988 4764 334444 446764
No 128
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=57.23 E-value=7.4 Score=28.16 Aligned_cols=32 Identities=22% Similarity=0.300 Sum_probs=23.8
Q ss_pred CCCCcEEEEeCCChhHHHHHHHHHH----cCCCceEE
Q 022496 245 DPQKDTYVMCHHGMRSLQVAQWLQT----QGFRRVFN 277 (296)
Q Consensus 245 ~~~~~iv~~C~~G~rs~~aa~~L~~----~G~~~v~~ 277 (296)
.+..+|++.|.+|..+...+..+++ .|++ +.+
T Consensus 4 ~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~-v~i 39 (108)
T 3nbm_A 4 SKELKVLVLCAGSGTSAQLANAINEGANLTEVR-VIA 39 (108)
T ss_dssp -CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCS-EEE
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHCCCc-eEE
Confidence 4567899999999888888877765 4774 544
No 129
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=57.08 E-value=8.8 Score=30.05 Aligned_cols=28 Identities=21% Similarity=0.380 Sum_probs=20.0
Q ss_pred CCCcEEEEeCCC-hhHHHH-HHHHH-HcCCC
Q 022496 246 PQKDTYVMCHHG-MRSLQV-AQWLQ-TQGFR 273 (296)
Q Consensus 246 ~~~~iv~~C~~G-~rs~~a-a~~L~-~~G~~ 273 (296)
.+.+|+|+|..| .||..+ +.+|. ..|.+
T Consensus 86 ~~~~VlVHC~aG~~RSg~~v~ayLm~~~~~~ 116 (177)
T 2oud_A 86 CGKGLLIHCQAGVSRSATIVIAYLMKHTRMT 116 (177)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHTSCCC
T ss_pred cCCcEEEEcCCCCCchHHHHHHHHHHHcCCC
Confidence 578999999998 788753 44444 46764
No 130
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=56.52 E-value=11 Score=29.02 Aligned_cols=29 Identities=14% Similarity=0.186 Sum_probs=19.7
Q ss_pred CCCCcEEEEeCCC-hhHH-HH-HHHHHHcCCC
Q 022496 245 DPQKDTYVMCHHG-MRSL-QV-AQWLQTQGFR 273 (296)
Q Consensus 245 ~~~~~iv~~C~~G-~rs~-~a-a~~L~~~G~~ 273 (296)
..+.+|+|+|..| .||. .+ |..+...|++
T Consensus 85 ~~~~~VlVHC~~G~sRS~~vv~ayLm~~~~~s 116 (161)
T 3emu_A 85 QRKEGVLIISGTGVNKAPAIVIAFLMYYQRLS 116 (161)
T ss_dssp HTTCEEEEEESSSSSHHHHHHHHHHHHHTTCC
T ss_pred hcCCeEEEEcCCCCcHHHHHHHHHHHHHhCCC
Confidence 3568999999998 4764 33 4444556764
No 131
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=56.06 E-value=9.6 Score=31.05 Aligned_cols=28 Identities=29% Similarity=0.339 Sum_probs=19.9
Q ss_pred CCCcEEEEeCCC-hhHHH-H-HHHHHHcCCC
Q 022496 246 PQKDTYVMCHHG-MRSLQ-V-AQWLQTQGFR 273 (296)
Q Consensus 246 ~~~~iv~~C~~G-~rs~~-a-a~~L~~~G~~ 273 (296)
.+.+|+|+|..| .||.. + +..++..|++
T Consensus 82 ~~~~VLVHC~aG~sRSgtvv~AYLm~~~g~s 112 (211)
T 2g6z_A 82 KGGKVLVHSEAGISRSPTICMAYLMKTKQFR 112 (211)
T ss_dssp TTCCEEEEESSSSSHHHHHHHHHHHHHHCCC
T ss_pred cCCeEEEECCCCCCcHHHHHHHHHHHHcCCC
Confidence 578999999999 78863 3 4444556764
No 132
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=55.64 E-value=9.7 Score=29.78 Aligned_cols=27 Identities=30% Similarity=0.444 Sum_probs=19.7
Q ss_pred CCcEEEEeCCC-hhHHH-HHHHH-HHcCCC
Q 022496 247 QKDTYVMCHHG-MRSLQ-VAQWL-QTQGFR 273 (296)
Q Consensus 247 ~~~iv~~C~~G-~rs~~-aa~~L-~~~G~~ 273 (296)
+.+|+|+|..| .||.. ++.+| ...|++
T Consensus 115 ~~~VlVHC~~G~~RSg~~v~ayLm~~~~~~ 144 (183)
T 3f81_A 115 NGRVLVHCREGYSRSPTLVIAYLMMRQKMD 144 (183)
T ss_dssp TCCEEEECSSSSSHHHHHHHHHHHHHHCCC
T ss_pred CCeEEEECCCCcchHHHHHHHHHHHHhCCC
Confidence 78999999998 48765 44544 456764
No 133
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=55.12 E-value=11 Score=30.75 Aligned_cols=29 Identities=24% Similarity=0.361 Sum_probs=20.4
Q ss_pred CCCCcEEEEeCCC-hhHHH-HHH-HHHHcCCC
Q 022496 245 DPQKDTYVMCHHG-MRSLQ-VAQ-WLQTQGFR 273 (296)
Q Consensus 245 ~~~~~iv~~C~~G-~rs~~-aa~-~L~~~G~~ 273 (296)
..+.+|+|+|..| .||.. ++. .|...|++
T Consensus 137 ~~~~~VLVHC~aG~sRS~tvv~aYLm~~~~~s 168 (219)
T 2y96_A 137 DDHSKILVHCVMGRSRSATLVLAYLMIHKDMT 168 (219)
T ss_dssp STTCCEEEECSSSSSHHHHHHHHHHHHHSCCC
T ss_pred ccCCeEEEECCCCCCHHHHHHHHHHHHHcCCC
Confidence 4578999999999 78864 344 44556764
No 134
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=54.02 E-value=9.3 Score=29.66 Aligned_cols=39 Identities=15% Similarity=0.221 Sum_probs=30.7
Q ss_pred CcEEEEeCCC-hhHHHHHHHHHHc----CCCceEEccchHHHhh
Q 022496 248 KDTYVMCHHG-MRSLQVAQWLQTQ----GFRRVFNVSGGIHAYA 286 (296)
Q Consensus 248 ~~iv~~C~~G-~rs~~aa~~L~~~----G~~~v~~l~GG~~~W~ 286 (296)
.+|+|.|.+. -||..|..+|+.+ |..++.+...|+..|.
T Consensus 7 ~~vLFVC~gN~cRSpmAE~i~~~~~~~~gl~~~~v~SAGt~~~~ 50 (158)
T 3rof_A 7 VDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSWN 50 (158)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCCSEEEEEEETTCCS
T ss_pred CEEEEEeCCchhHHHHHHHHHHHHHHHcCCCCeEEEecccCCcc
Confidence 4799999855 6999888877664 6656778888998884
No 135
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Probab=53.82 E-value=12 Score=30.16 Aligned_cols=28 Identities=29% Similarity=0.419 Sum_probs=19.9
Q ss_pred CCCcEEEEeCCC-hhHHH-HHH-HHHHcCCC
Q 022496 246 PQKDTYVMCHHG-MRSLQ-VAQ-WLQTQGFR 273 (296)
Q Consensus 246 ~~~~iv~~C~~G-~rs~~-aa~-~L~~~G~~ 273 (296)
.+.+|+|+|..| .||.. ++. .+...|++
T Consensus 130 ~~~~VLVHC~aG~sRS~tvv~aYLm~~~~~s 160 (205)
T 2pq5_A 130 PQGRVLVHCAMGVSRSATLVLAFLMIYENMT 160 (205)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHSCCC
T ss_pred CCCeEEEECCCCCcHHHHHHHHHHHHHcCCC
Confidence 578999999999 78873 344 44556764
No 136
>3ohg_A Uncharacterized protein from DUF2233 family; structural genomics, unknown function, joint center for STRU genomics, JCSG; HET: MSE; 1.80A {Bacteroides ovatus}
Probab=53.61 E-value=13 Score=31.81 Aligned_cols=26 Identities=23% Similarity=0.422 Sum_probs=23.0
Q ss_pred ChhHHHHHHHHHHcCCCceEEccchH
Q 022496 257 GMRSLQVAQWLQTQGFRRVFNVSGGI 282 (296)
Q Consensus 257 G~rs~~aa~~L~~~G~~~v~~l~GG~ 282 (296)
|..-...|..|+++|..++.+||||-
T Consensus 218 G~tl~ela~~~~~lG~~~AlnLDGGg 243 (285)
T 3ohg_A 218 GLTLPHLATMMKAVGCYNAINLDGGG 243 (285)
T ss_dssp CBCHHHHHHHHHHHTCSEEEECCCGG
T ss_pred CCCHHHHHHHHHHcCCCeEEECCCCc
Confidence 56668999999999999999999984
No 137
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Probab=53.42 E-value=14 Score=27.87 Aligned_cols=28 Identities=32% Similarity=0.312 Sum_probs=20.1
Q ss_pred CCCcEEEEeCCC-hhHH-HHHHHHHHcCCC
Q 022496 246 PQKDTYVMCHHG-MRSL-QVAQWLQTQGFR 273 (296)
Q Consensus 246 ~~~~iv~~C~~G-~rs~-~aa~~L~~~G~~ 273 (296)
++.+|+|+|..| .||. .++..|...|.+
T Consensus 95 ~~~~vlVHC~aG~~Rtg~~~a~~l~~~~~~ 124 (159)
T 1rxd_A 95 PGCCIAVHCVAGLGRAPVLVALALIEGGMK 124 (159)
T ss_dssp TTCEEEEECSSSSTTHHHHHHHHHHHTTCC
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHhCCC
Confidence 568999999988 5775 455666666653
No 138
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=51.98 E-value=14 Score=29.20 Aligned_cols=29 Identities=14% Similarity=0.265 Sum_probs=20.0
Q ss_pred CCCCcEEEEeCCC-hhHHH-H-HHHHHHcCCC
Q 022496 245 DPQKDTYVMCHHG-MRSLQ-V-AQWLQTQGFR 273 (296)
Q Consensus 245 ~~~~~iv~~C~~G-~rs~~-a-a~~L~~~G~~ 273 (296)
..+.+|+|+|..| .||.. + |..++..|++
T Consensus 115 ~~g~~VLVHC~~G~sRS~tvv~ayLm~~~~~s 146 (182)
T 2j16_A 115 TKREKILIHAQCGLSRSATLIIAYIMKYHNLS 146 (182)
T ss_dssp HTTCCEEEEESSCCSHHHHHHHHHHHHHTTCC
T ss_pred hcCCeEEEECCCCCChHHHHHHHHHHHHcCCC
Confidence 3678999999988 67763 3 4444556664
No 139
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=51.68 E-value=15 Score=27.85 Aligned_cols=28 Identities=29% Similarity=0.235 Sum_probs=19.9
Q ss_pred CCCcEEEEeCCC-hhHH-HHHHHHHHc-CCC
Q 022496 246 PQKDTYVMCHHG-MRSL-QVAQWLQTQ-GFR 273 (296)
Q Consensus 246 ~~~~iv~~C~~G-~rs~-~aa~~L~~~-G~~ 273 (296)
.+.+|+|+|..| .||. .++..|... |.+
T Consensus 108 ~~~~vlVHC~aG~~RTg~~~a~~L~~~~~~~ 138 (167)
T 3s4o_A 108 PPPTIGVHCVAGLGRAPILVALALVEYGNVS 138 (167)
T ss_dssp CCCEEEEECSSSSSHHHHHHHHHHHHTTCCC
T ss_pred CCCcEEEECCCCCCHHHHHHHHHHHHhCCCC
Confidence 478999999988 4664 556666665 654
No 140
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=51.08 E-value=13 Score=28.84 Aligned_cols=28 Identities=18% Similarity=0.095 Sum_probs=19.2
Q ss_pred CCCcEEEEeCCC-hhHHHH--HHHHHHcCCC
Q 022496 246 PQKDTYVMCHHG-MRSLQV--AQWLQTQGFR 273 (296)
Q Consensus 246 ~~~~iv~~C~~G-~rs~~a--a~~L~~~G~~ 273 (296)
.+.+|+|+|..| .||..+ +..+...|++
T Consensus 107 ~~~~VlVHC~aG~~RSg~~v~aylm~~~~~~ 137 (176)
T 3cm3_A 107 RNEPVLVHSAAGVNRSGAMILAYLMSKNKES 137 (176)
T ss_dssp HTCCEEEECSSSSSHHHHHHHHHHHHHCCSS
T ss_pred CCCcEEEECCcCCCHHHHHHHHHHHHHhCCC
Confidence 468999999988 677633 3344455664
No 141
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=50.55 E-value=27 Score=25.98 Aligned_cols=43 Identities=14% Similarity=0.237 Sum_probs=34.0
Q ss_pred CCCCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccchHHHhh
Q 022496 244 FDPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYA 286 (296)
Q Consensus 244 ~~~~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~ 286 (296)
.+++-+|.+....-.........|...||..|..-..|..+|.
T Consensus 9 m~k~~rILiVDD~~~~r~~l~~~L~~~G~~~v~~a~~g~~al~ 51 (134)
T 3to5_A 9 LNKNMKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALP 51 (134)
T ss_dssp CCTTCCEEEECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHH
T ss_pred hCCCCEEEEEeCCHHHHHHHHHHHHHcCCcEEEEECCHHHHHH
Confidence 3566688888887766678888999999987877778887775
No 142
>3eaq_A Heat resistant RNA dependent ATPase; DEAD box RNA helicase, dimer, ATP-binding, helicase, hydrolase, nucleotide-binding; 2.30A {Thermus thermophilus} PDB: 3ear_A 3eas_A
Probab=50.11 E-value=12 Score=30.09 Aligned_cols=37 Identities=16% Similarity=0.210 Sum_probs=31.9
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccchHH
Q 022496 246 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 283 (296)
Q Consensus 246 ~~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~ 283 (296)
...+++++|++-..+...+..|...|+. +..+.|++.
T Consensus 30 ~~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~lhg~~~ 66 (212)
T 3eaq_A 30 SPDRAMVFTRTKAETEEIAQGLLRLGHP-AQALHGDLS 66 (212)
T ss_dssp CCSCEEEECSSHHHHHHHHHHHHHHTCC-EEEECSSSC
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHHcCCC-EEEEECCCC
Confidence 4679999999988888999999999994 888999864
No 143
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=49.82 E-value=28 Score=24.89 Aligned_cols=27 Identities=22% Similarity=0.406 Sum_probs=18.8
Q ss_pred CCcEEEEeCCCh-hHHHHH----HHHHHcCCC
Q 022496 247 QKDTYVMCHHGM-RSLQVA----QWLQTQGFR 273 (296)
Q Consensus 247 ~~~iv~~C~~G~-rs~~aa----~~L~~~G~~ 273 (296)
-++|++.|.+|. .|..++ ..+.+.|++
T Consensus 18 ~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~ 49 (110)
T 3czc_A 18 MVKVLTACGNGMGSSMVIKMKVENALRQLGVS 49 (110)
T ss_dssp CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred CcEEEEECCCcHHHHHHHHHHHHHHHHHcCCC
Confidence 367999999995 555555 345566885
No 144
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=48.68 E-value=2.3 Score=32.63 Aligned_cols=39 Identities=13% Similarity=0.097 Sum_probs=30.0
Q ss_pred CcEEEEeCCC-hhHHHHHHHHHHcCCCceEEccchHHHhh
Q 022496 248 KDTYVMCHHG-MRSLQVAQWLQTQGFRRVFNVSGGIHAYA 286 (296)
Q Consensus 248 ~~iv~~C~~G-~rs~~aa~~L~~~G~~~v~~l~GG~~~W~ 286 (296)
++|+|.|.+. -||..|-.+|+.+.=..+.+...|...|.
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~~~~ 44 (146)
T 1p8a_A 5 KAVLFVCLGNICRSPACEGICRDMVGDKLIIDSAATSGFH 44 (146)
T ss_dssp CCEEEESSSSCSSSTTHHHHHHHHHSSCSSCEEECSCTTS
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhcCCCEEEEeeecCCcc
Confidence 4799999854 69999999998864334667778888883
No 145
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=48.23 E-value=16 Score=26.36 Aligned_cols=28 Identities=14% Similarity=0.287 Sum_probs=19.0
Q ss_pred CCCcEEEEeCCChh-HHHHHHHHH----HcCCC
Q 022496 246 PQKDTYVMCHHGMR-SLQVAQWLQ----TQGFR 273 (296)
Q Consensus 246 ~~~~iv~~C~~G~r-s~~aa~~L~----~~G~~ 273 (296)
+.++|++.|.+|.- |..++..|+ +.|+.
T Consensus 20 ~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~ 52 (113)
T 1tvm_A 20 SKRKIIVACGGAVATSTMAAEEIKELCQSHNIP 52 (113)
T ss_dssp SSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCC
T ss_pred cccEEEEECCCCHHHHHHHHHHHHHHHHHcCCe
Confidence 44689999999964 444555554 46875
No 146
>1vkr_A Mannitol-specific PTS system enzyme iiabc compone; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1vrv_A* 2few_B*
Probab=46.10 E-value=14 Score=27.41 Aligned_cols=27 Identities=33% Similarity=0.416 Sum_probs=18.1
Q ss_pred CCCcEEEEeCCChhH-HHHHHHH----HHcCC
Q 022496 246 PQKDTYVMCHHGMRS-LQVAQWL----QTQGF 272 (296)
Q Consensus 246 ~~~~iv~~C~~G~rs-~~aa~~L----~~~G~ 272 (296)
+-++|++.|.+|.-+ ..++..| .+.|+
T Consensus 12 ~~kkIlvVC~sGmgTS~ml~~klkk~~~e~gi 43 (125)
T 1vkr_A 12 HVRKIIVACDAGMGSSAMGAGVLRKKIQDAGL 43 (125)
T ss_dssp CCCEEEECCSSSSHHHHHHHHHHHHHHHHTTC
T ss_pred cccEEEEECCCcHHHHHHHHHHHHHHHHHCCC
Confidence 446899999999544 4445444 44687
No 147
>2p6n_A ATP-dependent RNA helicase DDX41; DEAD, structural genomics, structural genomic consortium, SGC, hydrolase; 2.60A {Homo sapiens}
Probab=44.93 E-value=17 Score=28.81 Aligned_cols=36 Identities=11% Similarity=0.275 Sum_probs=30.9
Q ss_pred CCcEEEEeCCChhHHHHHHHHHHcCCCceEEccchHH
Q 022496 247 QKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 283 (296)
Q Consensus 247 ~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~ 283 (296)
..++|++|++-..+...+..|...|+. +..+.|++.
T Consensus 54 ~~~~lVF~~~~~~~~~l~~~L~~~g~~-~~~lhg~~~ 89 (191)
T 2p6n_A 54 PPPVLIFAEKKADVDAIHEYLLLKGVE-AVAIHGGKD 89 (191)
T ss_dssp CSCEEEECSCHHHHHHHHHHHHHHTCC-EEEECTTSC
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCCc-EEEEeCCCC
Confidence 347999999999999999999999995 888899864
No 148
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=44.34 E-value=14 Score=28.54 Aligned_cols=40 Identities=15% Similarity=0.139 Sum_probs=30.8
Q ss_pred CCcEEEEeCCC-hhHHHHHHHHHHc----CCC-ceEEccchHHHhh
Q 022496 247 QKDTYVMCHHG-MRSLQVAQWLQTQ----GFR-RVFNVSGGIHAYA 286 (296)
Q Consensus 247 ~~~iv~~C~~G-~rs~~aa~~L~~~----G~~-~v~~l~GG~~~W~ 286 (296)
..+|+|.|.+. -||..|..+|+.+ |.. ++.+...|+..|.
T Consensus 5 ~~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~ 50 (157)
T 3n8i_A 5 TKSVLFVCLGNICRSPIAEAVFRKLVTDQNISENWRVDSAATSGYE 50 (157)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESSSTT
T ss_pred CCEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCccc
Confidence 45799999855 6999888777664 654 5788888999883
No 149
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=43.02 E-value=10 Score=27.19 Aligned_cols=28 Identities=14% Similarity=0.375 Sum_probs=19.2
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHH----cCCC
Q 022496 246 PQKDTYVMCHHGMRSLQVAQWLQT----QGFR 273 (296)
Q Consensus 246 ~~~~iv~~C~~G~rs~~aa~~L~~----~G~~ 273 (296)
+..+|++.|.+|.-+..++..|++ .|++
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~ 34 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKSKNIN 34 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHHHTCS
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHHCCCC
Confidence 445699999999644466666554 5774
No 150
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}
Probab=42.54 E-value=23 Score=28.17 Aligned_cols=28 Identities=21% Similarity=0.262 Sum_probs=19.1
Q ss_pred CCCcEEEEeCCC-hhHHHH-HHHHH-HcCCC
Q 022496 246 PQKDTYVMCHHG-MRSLQV-AQWLQ-TQGFR 273 (296)
Q Consensus 246 ~~~~iv~~C~~G-~rs~~a-a~~L~-~~G~~ 273 (296)
.+.+|+|+|..| .||..+ +..|. ..|.+
T Consensus 124 ~~~~VlVHC~aG~~RSg~~v~~yL~~~~~~~ 154 (195)
T 2q05_A 124 RNEPVLVHCAAGVNRSGAMILAYLMSKNKES 154 (195)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHCCSS
T ss_pred cCCcEEEEcCCCCChHHHHHHHHHHHHhCCC
Confidence 578999999988 777643 33443 46664
No 151
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=41.58 E-value=23 Score=26.23 Aligned_cols=68 Identities=24% Similarity=0.300 Sum_probs=36.5
Q ss_pred cEEEecCChHHHHhhCCC--CceecccccccCCCCC-c---c----CCCCCCCcEEEEeCCC-hhHH-HHHHHHHHc-CC
Q 022496 206 AQLIDVREPEEVALSSLP--GFQVLPLRQFGSWGPD-I---T----VKFDPQKDTYVMCHHG-MRSL-QVAQWLQTQ-GF 272 (296)
Q Consensus 206 ~~llDvR~~~ey~~ghIp--gA~~ip~~~l~~~~~~-~---~----~~~~~~~~iv~~C~~G-~rs~-~aa~~L~~~-G~ 272 (296)
..+||++...|+....++ +..++|+.+....... + . ..+..+.+|+|+|..| .||. .++..|... |.
T Consensus 38 ~~Vv~l~~~~e~~~~~~~~~~~~~~~~~d~~~p~~~~~~~~~~~i~~~~~~~~~vlVHC~aG~~Rsg~~~~~~l~~~~~~ 117 (151)
T 2img_A 38 RHLVSLTERGPPHSDSCPGLTLHRLRIPDFCPPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLACYLVKERGL 117 (151)
T ss_dssp EEEEECSSSCCTTGGGCTTSEEEECCCCTTCCCCHHHHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHHHHHHHHHHHCC
T ss_pred CEEEECCCCCCCCHHHHhhCCeEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEECCCCCChHHHHHHHHHHHHhCc
Confidence 468888877554332222 2455665543221100 0 0 0113578999999988 4775 444555544 66
Q ss_pred C
Q 022496 273 R 273 (296)
Q Consensus 273 ~ 273 (296)
+
T Consensus 118 ~ 118 (151)
T 2img_A 118 A 118 (151)
T ss_dssp C
T ss_pred C
Confidence 3
No 152
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=41.55 E-value=15 Score=26.26 Aligned_cols=26 Identities=15% Similarity=0.277 Sum_probs=19.0
Q ss_pred CcEEEEeCCChhHHHHHHHHH----HcCCC
Q 022496 248 KDTYVMCHHGMRSLQVAQWLQ----TQGFR 273 (296)
Q Consensus 248 ~~iv~~C~~G~rs~~aa~~L~----~~G~~ 273 (296)
++|++.|.+|..+..++..++ +.|++
T Consensus 4 kkIll~Cg~G~sTS~l~~k~~~~~~~~gi~ 33 (106)
T 1e2b_A 4 KHIYLFSSAGMSTSLLVSKMRAQAEKYEVP 33 (106)
T ss_dssp EEEEEECSSSTTTHHHHHHHHHHHHHSCCS
T ss_pred cEEEEECCCchhHHHHHHHHHHHHHHCCCC
Confidence 479999999976666665554 46885
No 153
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=40.84 E-value=17 Score=28.11 Aligned_cols=40 Identities=15% Similarity=0.080 Sum_probs=30.4
Q ss_pred CCcEEEEeCCC-hhHHHHHHHHHHc----CCC-c-eEEccchHHHhh
Q 022496 247 QKDTYVMCHHG-MRSLQVAQWLQTQ----GFR-R-VFNVSGGIHAYA 286 (296)
Q Consensus 247 ~~~iv~~C~~G-~rs~~aa~~L~~~----G~~-~-v~~l~GG~~~W~ 286 (296)
..+|+|.|.+. -||..|-.+|+.+ |.. . +.+...|...|.
T Consensus 7 ~~~VLFVCtgN~cRSpmAEal~~~~~~~~gl~~~~~~v~SAGt~~~~ 53 (161)
T 1d1q_A 7 KISVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNYH 53 (161)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEEESSCTT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHHHHHHcCCCCCeEEEEeccccCCc
Confidence 35799999855 6999888887764 553 3 778888998884
No 154
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=40.27 E-value=25 Score=27.68 Aligned_cols=29 Identities=31% Similarity=0.332 Sum_probs=20.8
Q ss_pred CCCCcEEEEeCCC-hhHH-HHHHHHHHcCCC
Q 022496 245 DPQKDTYVMCHHG-MRSL-QVAQWLQTQGFR 273 (296)
Q Consensus 245 ~~~~~iv~~C~~G-~rs~-~aa~~L~~~G~~ 273 (296)
.++.+|+|+|..| .||. .++..|...|++
T Consensus 115 ~~~~~VlVHC~aG~gRSg~~va~~L~~~g~~ 145 (189)
T 3rz2_A 115 EPGCCIAVHCVAGLGRAPVLVALALIEGGMK 145 (189)
T ss_dssp STTCEEEEECSSSSTTHHHHHHHHHHTTTCC
T ss_pred CCCCcEEEECCCCCCHHHHHHHHHHHHcCCC
Confidence 4678999999988 4765 556666666664
No 155
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=39.98 E-value=16 Score=27.28 Aligned_cols=35 Identities=20% Similarity=0.354 Sum_probs=27.9
Q ss_pred cEEEEeCCC-hhHHHHHHHHHHcCCCceEEccchHH
Q 022496 249 DTYVMCHHG-MRSLQVAQWLQTQGFRRVFNVSGGIH 283 (296)
Q Consensus 249 ~iv~~C~~G-~rs~~aa~~L~~~G~~~v~~l~GG~~ 283 (296)
+|+|.|.+. -||..|-.+|+.+.=.++.+...|..
T Consensus 6 ~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt~ 41 (134)
T 2l17_A 6 KVMFVCKRNSCRSQMAEGFAKTLGAGKIAVTSCGLE 41 (134)
T ss_dssp EEEEECCSSTHHHHHHHHHHHHHSBTTEEEEEECCT
T ss_pred EEEEEeCCchHHHHHHHHHHHHHcCCCEEEEcccCC
Confidence 699999855 69999999999875445777777775
No 156
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=39.86 E-value=23 Score=26.55 Aligned_cols=37 Identities=27% Similarity=0.293 Sum_probs=29.0
Q ss_pred CcEEEEeCCC-hhHHHHHHHHHHcCCCceEEccchHHH
Q 022496 248 KDTYVMCHHG-MRSLQVAQWLQTQGFRRVFNVSGGIHA 284 (296)
Q Consensus 248 ~~iv~~C~~G-~rs~~aa~~L~~~G~~~v~~l~GG~~~ 284 (296)
++|+|.|.+. -||..|-.+|+.+.=.++.+...|...
T Consensus 4 ~~VLFVC~gN~cRSpmAEai~~~~~~~~~~v~SAGt~~ 41 (139)
T 1jl3_A 4 KIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIEA 41 (139)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHSCTTEEEEEEESSC
T ss_pred CeEEEEcCCchHHHHHHHHHHHHhCCCCEEEEcCcCCC
Confidence 4799999855 799999999998743457777778765
No 157
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}
Probab=38.81 E-value=27 Score=26.78 Aligned_cols=28 Identities=32% Similarity=0.469 Sum_probs=20.4
Q ss_pred CCCcEEEEeCCC-hhHH-HHHHHHHH-cCCC
Q 022496 246 PQKDTYVMCHHG-MRSL-QVAQWLQT-QGFR 273 (296)
Q Consensus 246 ~~~~iv~~C~~G-~rs~-~aa~~L~~-~G~~ 273 (296)
.+.+|+|+|..| .||. .++..|.. .|++
T Consensus 112 ~~~~vlVHC~aG~~RTg~~va~~L~~~~~~~ 142 (169)
T 1yn9_A 112 PGMLVGVHCTHGINRTGYMVCRYLMHTLGIA 142 (169)
T ss_dssp TTSEEEEECSSSSHHHHHHHHHHHHHHHCCC
T ss_pred CCCcEEEECCCCCChHHHHHHHHHHHHhCCC
Confidence 578999999988 5765 45556655 7764
No 158
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=37.92 E-value=26 Score=26.73 Aligned_cols=37 Identities=22% Similarity=0.143 Sum_probs=28.6
Q ss_pred CcEEEEeCCC-hhHHHHHHHHHHcCCCceEEccchHHH
Q 022496 248 KDTYVMCHHG-MRSLQVAQWLQTQGFRRVFNVSGGIHA 284 (296)
Q Consensus 248 ~~iv~~C~~G-~rs~~aa~~L~~~G~~~v~~l~GG~~~ 284 (296)
++|+|.|.+. -||..|..+|+.+.-.++.+...|+..
T Consensus 21 ~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~~ 58 (148)
T 3rh0_A 21 KSVLFVCVGNGGKSQMAAALAQKYASDSVEIHSAGTKP 58 (148)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHCCTTSEEEEEESSC
T ss_pred CEEEEECCCchhHHHHHHHHHHHhcCCCEEEEecccCC
Confidence 5799999855 699999999998754567777777643
No 159
>2yjt_D ATP-dependent RNA helicase SRMB, regulator of ribonuclease activity A; hydrolase inhibitor-hydrolase complex, DEAD box RNA helicase; 2.90A {Escherichia coli}
Probab=43.38 E-value=7.1 Score=30.17 Aligned_cols=38 Identities=18% Similarity=0.374 Sum_probs=31.6
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccchHHH
Q 022496 246 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHA 284 (296)
Q Consensus 246 ~~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~ 284 (296)
.+.++|++|++-..+...+..|...|+. +..+.|++..
T Consensus 29 ~~~~~iVF~~~~~~~~~l~~~L~~~~~~-~~~~~g~~~~ 66 (170)
T 2yjt_D 29 EATRSIVFVRKRERVHELANWLREAGIN-NCYLEGEMVQ 66 (170)
Confidence 4568999999988899999999999984 7788888753
No 160
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=37.11 E-value=16 Score=34.09 Aligned_cols=32 Identities=25% Similarity=0.208 Sum_probs=25.0
Q ss_pred CCCcEEEEeCCCh---hHHHHHHHHHHcCCCceEEc
Q 022496 246 PQKDTYVMCHHGM---RSLQVAQWLQTQGFRRVFNV 278 (296)
Q Consensus 246 ~~~~iv~~C~~G~---rs~~aa~~L~~~G~~~v~~l 278 (296)
+.++|++.|..|+ .+..+|+.|...||+ |.++
T Consensus 51 ~~~~v~VlcG~GNNGGDGlv~AR~L~~~G~~-V~v~ 85 (502)
T 3rss_A 51 SDYRFLVLCGGGNNGGDGFVVARNLLGVVKD-VLVV 85 (502)
T ss_dssp TTCEEEEEECSSHHHHHHHHHHHHHTTTSSE-EEEE
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEE
Confidence 4678999999765 667889999999995 5443
No 161
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=36.67 E-value=11 Score=30.08 Aligned_cols=40 Identities=23% Similarity=0.294 Sum_probs=30.4
Q ss_pred CCCcEEEEeCCC-hhHHHHHHHHHHc----CCCceEEccchHHHhh
Q 022496 246 PQKDTYVMCHHG-MRSLQVAQWLQTQ----GFRRVFNVSGGIHAYA 286 (296)
Q Consensus 246 ~~~~iv~~C~~G-~rs~~aa~~L~~~----G~~~v~~l~GG~~~W~ 286 (296)
+..+|+|+|.+. -||..|..+|+.+ |. ++.+...|+.+|.
T Consensus 33 ~~~~VLFVC~gNiCRSpmAEai~r~~~~~~g~-~~~v~SAGt~~~~ 77 (184)
T 4etn_A 33 GSMDIIFVCTGNTSRSPMAEALFKSIAEREGL-NVNVRSAGVFASP 77 (184)
T ss_dssp -CEEEEEEESSSSSHHHHHHHHHHHHHHHHTC-CEEEEEEETTCCT
T ss_pred CCCEEEEECCCchhHHHHHHHHHHHHHHhcCC-cEEEEeeecCCcC
Confidence 346899999855 6999888887764 42 5778888998885
No 162
>1oyw_A RECQ helicase, ATP-dependent DNA helicase; winged helix, helix-turn-helix, ATP binding, Zn(2+) binding, hydrolase; 1.80A {Escherichia coli} SCOP: a.4.5.43 c.37.1.19 c.37.1.19 PDB: 1oyy_A*
Probab=35.73 E-value=27 Score=32.41 Aligned_cols=37 Identities=19% Similarity=0.341 Sum_probs=32.8
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccchHH
Q 022496 246 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 283 (296)
Q Consensus 246 ~~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~ 283 (296)
++.++||||.+-..+...+..|...|+ ++..+.||+.
T Consensus 235 ~~~~~IVf~~sr~~~e~l~~~L~~~g~-~~~~~h~~l~ 271 (523)
T 1oyw_A 235 RGKSGIIYCNSRAKVEDTAARLQSKGI-SAAAYHAGLE 271 (523)
T ss_dssp TTCCEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTSC
T ss_pred CCCcEEEEeCCHHHHHHHHHHHHHCCC-CEEEecCCCC
Confidence 567899999998899999999999998 5888999874
No 163
>2v1x_A ATP-dependent DNA helicase Q1; DNA strand annealing, mismatch repair, nucleotide-binding, DNA-binding, polymorphism, nuclear protein, ATPase; HET: ADP; 2.00A {Homo sapiens} PDB: 2wwy_A*
Probab=35.45 E-value=27 Score=33.07 Aligned_cols=37 Identities=19% Similarity=0.204 Sum_probs=33.0
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccchHH
Q 022496 246 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 283 (296)
Q Consensus 246 ~~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~ 283 (296)
++.++|+||.+-..+...+..|...|+ ++..|.||+.
T Consensus 266 ~~~~~IVf~~sr~~~e~la~~L~~~g~-~~~~~h~~l~ 302 (591)
T 2v1x_A 266 KGQSGIIYCFSQKDSEQVTVSLQNLGI-HAGAYHANLE 302 (591)
T ss_dssp TTCEEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTSC
T ss_pred cCCCeEEEeCcHHHHHHHHHHHHHCCC-CEEEecCCCC
Confidence 568999999999999999999999999 5889999973
No 164
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=35.29 E-value=41 Score=24.75 Aligned_cols=31 Identities=6% Similarity=0.068 Sum_probs=24.7
Q ss_pred cEEEEeCCChhHHHHHHHHHHcCCCceEEccc
Q 022496 249 DTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSG 280 (296)
Q Consensus 249 ~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~G 280 (296)
.-|+.|+.|......+..|.+.|++ |.+++-
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~-v~vid~ 38 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIP-LVVIET 38 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCC-EEEEES
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCC-EEEEEC
Confidence 3467778899999999999999984 776654
No 165
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=34.98 E-value=30 Score=25.59 Aligned_cols=37 Identities=22% Similarity=0.172 Sum_probs=28.8
Q ss_pred CcEEEEeCCC-hhHHHHHHHHHHcCCCceEEccchHHH
Q 022496 248 KDTYVMCHHG-MRSLQVAQWLQTQGFRRVFNVSGGIHA 284 (296)
Q Consensus 248 ~~iv~~C~~G-~rs~~aa~~L~~~G~~~v~~l~GG~~~ 284 (296)
++|+|.|.+. -||..|-.+|+.+.=.++.+...|...
T Consensus 4 ~~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt~~ 41 (131)
T 1jf8_A 4 KTIYFISTGNSARSQMAEGWGKEILGEGWNVYSAGIET 41 (131)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHSTTTEEEEEEESSC
T ss_pred CEEEEEcCCcchHHHHHHHHHHHhcCCCEEEEcCcCCC
Confidence 4799999855 799999999998643467777778765
No 166
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=34.57 E-value=28 Score=29.76 Aligned_cols=28 Identities=25% Similarity=0.328 Sum_probs=18.7
Q ss_pred CCCcEEEEeCCC-hhHH-HHHHHHHH-cCCC
Q 022496 246 PQKDTYVMCHHG-MRSL-QVAQWLQT-QGFR 273 (296)
Q Consensus 246 ~~~~iv~~C~~G-~rs~-~aa~~L~~-~G~~ 273 (296)
.+.+|+|+|..| .||. .++.+|.. .|++
T Consensus 105 ~g~~VLVHC~aG~sRS~tvv~ayLm~~~g~s 135 (294)
T 3nme_A 105 NGGVTYVHSTAGMGRAPAVALTYMFWVQGYK 135 (294)
T ss_dssp HCSEEEEECSSSSSHHHHHHHHHHHHTSCCC
T ss_pred CCCEEEEECCCCCchhHHHHHHHHHHHhCCC
Confidence 367899999998 4765 44455544 4653
No 167
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=33.47 E-value=35 Score=27.29 Aligned_cols=28 Identities=21% Similarity=0.078 Sum_probs=19.6
Q ss_pred CCCcEEEEeCCC-hhHH-HHHHHHHHc--CCC
Q 022496 246 PQKDTYVMCHHG-MRSL-QVAQWLQTQ--GFR 273 (296)
Q Consensus 246 ~~~~iv~~C~~G-~rs~-~aa~~L~~~--G~~ 273 (296)
.+.+|+|+|..| .|+. .++.+|... |.+
T Consensus 132 ~~~~VlVHC~aG~gRTg~~~a~~L~~~~~g~~ 163 (212)
T 1fpz_A 132 NYRKTLIHSYGGLGRSCLVAACLLLYLSDTIS 163 (212)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHCSSCC
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHhccCCC
Confidence 578999999988 4765 445566654 653
No 168
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A*
Probab=33.14 E-value=35 Score=29.19 Aligned_cols=27 Identities=26% Similarity=0.437 Sum_probs=20.5
Q ss_pred CCcEEEEeCCC-hhH-HHHHHHHHHcCCC
Q 022496 247 QKDTYVMCHHG-MRS-LQVAQWLQTQGFR 273 (296)
Q Consensus 247 ~~~iv~~C~~G-~rs-~~aa~~L~~~G~~ 273 (296)
+.+++|+|..| .|. ..+|..|..+|.+
T Consensus 173 ~~pvl~HC~aGkDRTG~~~alll~~~g~~ 201 (296)
T 1ywf_A 173 GRPVLTHCFAGKDRTGFVVALVLEAVGLD 201 (296)
T ss_dssp TCCEEEECSSSSSHHHHHHHHHHHHTTCC
T ss_pred CCCEEEECCCCCccccHHHHHHHHHcCCC
Confidence 78999999988 355 4556667778886
No 169
>2i4i_A ATP-dependent RNA helicase DDX3X; DEAD, structural genomics, SGC, structural GE consortium, hydrolase; HET: AMP; 2.20A {Homo sapiens}
Probab=33.04 E-value=35 Score=29.94 Aligned_cols=39 Identities=13% Similarity=0.194 Sum_probs=33.5
Q ss_pred CCCCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccchHH
Q 022496 244 FDPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 283 (296)
Q Consensus 244 ~~~~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~ 283 (296)
..++.+++++|++-..+...+..|...|+ ++..+.|++.
T Consensus 273 ~~~~~~~lVf~~~~~~~~~l~~~L~~~~~-~~~~~h~~~~ 311 (417)
T 2i4i_A 273 TGKDSLTLVFVETKKGADSLEDFLYHEGY-ACTSIHGDRS 311 (417)
T ss_dssp CCTTCEEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTSC
T ss_pred cCCCCeEEEEECCHHHHHHHHHHHHHCCC-CeeEecCCCC
Confidence 34678899999998899999999999998 5888999864
No 170
>3i32_A Heat resistant RNA dependent ATPase; RNA helicase, dimer, RNA recognition motif, ATP-BIND helicase, nucleotide-binding; 2.80A {Thermus thermophilus}
Probab=32.88 E-value=28 Score=29.81 Aligned_cols=36 Identities=17% Similarity=0.209 Sum_probs=31.4
Q ss_pred CCcEEEEeCCChhHHHHHHHHHHcCCCceEEccchHH
Q 022496 247 QKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 283 (296)
Q Consensus 247 ~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~ 283 (296)
..+++++|++-..+...+..|...|+. +..|.|++.
T Consensus 28 ~~~~LVF~~t~~~~~~l~~~L~~~g~~-~~~lhg~l~ 63 (300)
T 3i32_A 28 PDRAMVFTRTKAETEEIAQGLLRLGHP-AQALHGDMS 63 (300)
T ss_dssp CSSEEEECSSHHHHHHHHHHHHTTTCC-EEEECSCCC
T ss_pred CCCEEEEECCHHHHHHHHHHHHhCCCC-EEEEeCCCC
Confidence 679999999988888999999999994 888899853
No 171
>1xti_A Probable ATP-dependent RNA helicase P47; alpha-beta fold, gene regulation; 1.95A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 1xtj_A* 1xtk_A
Probab=32.83 E-value=35 Score=29.62 Aligned_cols=37 Identities=19% Similarity=0.310 Sum_probs=31.9
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccchHH
Q 022496 246 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 283 (296)
Q Consensus 246 ~~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~ 283 (296)
+..+++++|++-..+...+..|...|+. +..+.|++.
T Consensus 249 ~~~~~lvf~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~ 285 (391)
T 1xti_A 249 EFNQVVIFVKSVQRCIALAQLLVEQNFP-AIAIHRGMP 285 (391)
T ss_dssp CCSEEEEECSCHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred CCCcEEEEeCcHHHHHHHHHHHHhCCCc-EEEEeCCCC
Confidence 4578999999988999999999999985 778888853
No 172
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A*
Probab=32.82 E-value=34 Score=30.52 Aligned_cols=28 Identities=32% Similarity=0.328 Sum_probs=24.7
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCC
Q 022496 246 PQKDTYVMCHHGMRSLQVAQWLQTQGFR 273 (296)
Q Consensus 246 ~~~~iv~~C~~G~rs~~aa~~L~~~G~~ 273 (296)
+.++|++-..+|..|..++..|++.||+
T Consensus 16 ~~~kVvVa~SGGvDSsv~a~lL~~~G~~ 43 (380)
T 2der_A 16 TAKKVIVGMSGGVDSSVSAWLLQQQGYQ 43 (380)
T ss_dssp -CCEEEEECCSCSTTHHHHHHHHTTCCE
T ss_pred CCCEEEEEEEChHHHHHHHHHHHHcCCe
Confidence 5678999999999999999999999985
No 173
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A
Probab=31.63 E-value=33 Score=28.36 Aligned_cols=28 Identities=25% Similarity=0.427 Sum_probs=18.9
Q ss_pred CCCcEEEEeCCC-hhHH-HHHHHHHH-cCCC
Q 022496 246 PQKDTYVMCHHG-MRSL-QVAQWLQT-QGFR 273 (296)
Q Consensus 246 ~~~~iv~~C~~G-~rs~-~aa~~L~~-~G~~ 273 (296)
++.+|+|+|..| .||. .++.+|.. .|++
T Consensus 140 ~~~~VlVHC~aG~gRTGt~ia~yLm~~~~~s 170 (241)
T 2c46_A 140 PPELIGVHCTHGFNRTGFLICAFLVEKMDWS 170 (241)
T ss_dssp -CEEEEEECSSSSHHHHHHHHHHHHHTTCCC
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHHhCCC
Confidence 357999999988 5665 44555555 5764
No 174
>1hv8_A Putative ATP-dependent RNA helicase MJ0669; RNA-binding protein, ATPase, RNA binding protein; 3.00A {Methanocaldococcus jannaschii} SCOP: c.37.1.19 c.37.1.19
Probab=30.47 E-value=40 Score=28.72 Aligned_cols=38 Identities=18% Similarity=0.361 Sum_probs=32.4
Q ss_pred CCCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccchHH
Q 022496 245 DPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 283 (296)
Q Consensus 245 ~~~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~ 283 (296)
....+++++|++-..+...+..|...|+. +..+.|++.
T Consensus 236 ~~~~~~lvf~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~ 273 (367)
T 1hv8_A 236 NKEFYGLVFCKTKRDTKELASMLRDIGFK-AGAIHGDLS 273 (367)
T ss_dssp STTCCEEEECSSHHHHHHHHHHHHHTTCC-EEEECSSSC
T ss_pred cCCCcEEEEECCHHHHHHHHHHHHhcCCC-eEEeeCCCC
Confidence 35678999999999999999999999984 888888864
No 175
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=30.45 E-value=34 Score=25.97 Aligned_cols=36 Identities=22% Similarity=0.163 Sum_probs=28.0
Q ss_pred CcEEEEeCCC-hhHHHHHHHHHHcCCCceEEccchHHH
Q 022496 248 KDTYVMCHHG-MRSLQVAQWLQTQGFRRVFNVSGGIHA 284 (296)
Q Consensus 248 ~~iv~~C~~G-~rs~~aa~~L~~~G~~~v~~l~GG~~~ 284 (296)
++|+|.|.+. -||..|-.+|+.+. ..+.+...|..+
T Consensus 9 ~~VLFVC~gN~cRSpmAEal~r~~~-~~~~v~SAGt~~ 45 (150)
T 2wmy_A 9 DSILVICTGNICRSPIGERLLRRLL-PSKKINSAGVGA 45 (150)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHC-TTSEEEEEETTC
T ss_pred CEEEEEcCCchHHHHHHHHHHHHhc-CCCEEEeccccC
Confidence 4799999855 69999999999874 346677777755
No 176
>1s2m_A Putative ATP-dependent RNA helicase DHH1; ATP-binding, RNA-binding, RNA binding protein; 2.10A {Saccharomyces cerevisiae} SCOP: c.37.1.19 c.37.1.19 PDB: 2wax_A* 2way_A
Probab=30.39 E-value=36 Score=29.72 Aligned_cols=37 Identities=11% Similarity=0.296 Sum_probs=31.9
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccchHH
Q 022496 246 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 283 (296)
Q Consensus 246 ~~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~ 283 (296)
...+++++|++-..+...+..|...|+. +..+.|++.
T Consensus 257 ~~~~~lVf~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~ 293 (400)
T 1s2m_A 257 QINQAIIFCNSTNRVELLAKKITDLGYS-CYYSHARMK 293 (400)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHHTCC-EEEECTTSC
T ss_pred CCCcEEEEEecHHHHHHHHHHHHhcCCC-eEEecCCCC
Confidence 4568999999988999999999999984 888889864
No 177
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=29.01 E-value=60 Score=23.59 Aligned_cols=30 Identities=17% Similarity=0.293 Sum_probs=23.2
Q ss_pred EEEEeCCChhHHHHHHHHHHcCCCceEEccc
Q 022496 250 TYVMCHHGMRSLQVAQWLQTQGFRRVFNVSG 280 (296)
Q Consensus 250 iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~G 280 (296)
-|+.|+.|.-....+..|.+.|+ +|..++-
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~g~-~V~~id~ 37 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAAGK-KVLAVDK 37 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTC-CEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHCCC-eEEEEEC
Confidence 35666778888889999999998 4776654
No 178
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=28.59 E-value=44 Score=29.37 Aligned_cols=29 Identities=14% Similarity=0.153 Sum_probs=20.3
Q ss_pred CCCCcEEEEeCCC-hhHH-HHHHHHHH-cCCC
Q 022496 245 DPQKDTYVMCHHG-MRSL-QVAQWLQT-QGFR 273 (296)
Q Consensus 245 ~~~~~iv~~C~~G-~rs~-~aa~~L~~-~G~~ 273 (296)
..+.+|+|+|..| .||. .++..|.. .|++
T Consensus 267 ~~~~~VLVHC~aG~gRTGtvvaayLm~~~g~s 298 (348)
T 1ohe_A 267 NAEGAIAVHSKAGLGRTGTLIACYIMKHYRMT 298 (348)
T ss_dssp SCSSEEEEECSSSSHHHHHHHHHHHHHHHCCC
T ss_pred hCCCcEEEECCCCCChHHHHHHHHHHHHcCCC
Confidence 4578999999988 6775 44455554 6764
No 179
>2wja_A Putative acid phosphatase WZB; hydrolase; 2.50A {Escherichia coli}
Probab=27.05 E-value=41 Score=26.15 Aligned_cols=36 Identities=22% Similarity=0.163 Sum_probs=28.1
Q ss_pred CcEEEEeCCC-hhHHHHHHHHHHcCCCceEEccchHHH
Q 022496 248 KDTYVMCHHG-MRSLQVAQWLQTQGFRRVFNVSGGIHA 284 (296)
Q Consensus 248 ~~iv~~C~~G-~rs~~aa~~L~~~G~~~v~~l~GG~~~ 284 (296)
++|+|.|.+. -||..|-.+|+.+. .++.+...|..+
T Consensus 27 ~~VLFVCtgNicRSpmAEal~r~~~-~~~~v~SAGt~~ 63 (168)
T 2wja_A 27 DSILVICTGNICRSPIGERLLRRLL-PSKKINSAGVGA 63 (168)
T ss_dssp SEEEEEESSSSSHHHHHHHHHHHHS-TTSEEEEEETTC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhc-CCeEEEeeecCC
Confidence 4799999855 79999999999874 347777777755
No 180
>3pey_A ATP-dependent RNA helicase DBP5; RECA, DEAD-BOX, ATPase, helicase, mRNA-export, nuclear pore, hydrolase-RNA complex; HET: ADP; 1.40A {Saccharomyces cerevisiae} PDB: 3pew_A* 3pex_A* 3pez_A* 3rrm_A* 3rrn_A* 2kbe_A 3gfp_A 2kbf_A 3pev_A* 3peu_A*
Probab=26.97 E-value=44 Score=28.82 Aligned_cols=37 Identities=11% Similarity=0.152 Sum_probs=32.1
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccchHH
Q 022496 246 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 283 (296)
Q Consensus 246 ~~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~ 283 (296)
...+++++|++-..+...+..|...|+ ++..+.|++.
T Consensus 242 ~~~~~lvf~~~~~~~~~l~~~l~~~~~-~~~~~~~~~~ 278 (395)
T 3pey_A 242 TIGSSIIFVATKKTANVLYGKLKSEGH-EVSILHGDLQ 278 (395)
T ss_dssp TSSEEEEECSCHHHHHHHHHHHHHTTC-CCEEECTTSC
T ss_pred cCCCEEEEeCCHHHHHHHHHHHHhcCC-cEEEeCCCCC
Confidence 457899999998889999999999998 5888999864
No 181
>3fht_A ATP-dependent RNA helicase DDX19B; DBP5, DEAD-box helicase, RNA dependent ATPase, mRNA export, nucleocytoplasmic transport, NUP214, CAN; HET: ANP; 2.20A {Homo sapiens} PDB: 3ews_A* 3g0h_A* 3fhc_B
Probab=26.78 E-value=43 Score=29.17 Aligned_cols=37 Identities=22% Similarity=0.339 Sum_probs=31.8
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccchHH
Q 022496 246 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 283 (296)
Q Consensus 246 ~~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~ 283 (296)
...+++++|++-..+...+..|...|+ ++..+.|++.
T Consensus 265 ~~~~~lvf~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~ 301 (412)
T 3fht_A 265 TIAQAMIFCHTRKTASWLAAELSKEGH-QVALLSGEMM 301 (412)
T ss_dssp SSSEEEEECSSHHHHHHHHHHHHHTTC-CCEEECTTSC
T ss_pred CCCCEEEEeCCHHHHHHHHHHHHhCCC-eEEEecCCCC
Confidence 356899999999999999999999998 4888899853
No 182
>2j0s_A ATP-dependent RNA helicase DDX48; mRNA processing, phosphorylation, rRNA processing, mRNA splicing, mRNA transport; HET: ANP; 2.21A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 2j0q_A* 2hyi_C* 3ex7_C* 2xb2_A* 2hxy_A 2j0u_A 2j0u_B 2zu6_A
Probab=26.64 E-value=44 Score=29.27 Aligned_cols=36 Identities=11% Similarity=0.286 Sum_probs=31.2
Q ss_pred CCcEEEEeCCChhHHHHHHHHHHcCCCceEEccchHH
Q 022496 247 QKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 283 (296)
Q Consensus 247 ~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~ 283 (296)
..+++++|++-..+...+..|...|+ ++..+.|++.
T Consensus 276 ~~~~lVf~~~~~~~~~l~~~L~~~~~-~~~~~h~~~~ 311 (410)
T 2j0s_A 276 ITQAVIFCNTKRKVDWLTEKMREANF-TVSSMHGDMP 311 (410)
T ss_dssp SSEEEEECSSHHHHHHHHHHHHHTTC-CCEEECTTSC
T ss_pred CCcEEEEEcCHHHHHHHHHHHHhCCC-ceEEeeCCCC
Confidence 45899999998889999999999999 4888999864
No 183
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=25.91 E-value=47 Score=25.77 Aligned_cols=36 Identities=25% Similarity=0.288 Sum_probs=28.2
Q ss_pred CcEEEEeCCC-hhHHHHHHHHHHcCCCceEEccchHHH
Q 022496 248 KDTYVMCHHG-MRSLQVAQWLQTQGFRRVFNVSGGIHA 284 (296)
Q Consensus 248 ~~iv~~C~~G-~rs~~aa~~L~~~G~~~v~~l~GG~~~ 284 (296)
++|+|.|.+. -||..|-.+|+.+. .++.+...|..+
T Consensus 23 ~~VLFVCtgN~cRSpmAEal~r~~~-~~~~v~SAGt~~ 59 (167)
T 2fek_A 23 NNILVVCVGNICRSPTAERLLQRYH-PELKVESAGLGA 59 (167)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHC-TTCEEEEEETTC
T ss_pred CeEEEEcCCcHHHHHHHHHHHHHhc-CCeEEEeeecCC
Confidence 4799999855 79999999999874 347777778765
No 184
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1
Probab=25.02 E-value=87 Score=25.13 Aligned_cols=33 Identities=12% Similarity=0.206 Sum_probs=27.3
Q ss_pred CCCcEEEEeC---CChhHHHHHHHHHHcCCCceEEc
Q 022496 246 PQKDTYVMCH---HGMRSLQVAQWLQTQGFRRVFNV 278 (296)
Q Consensus 246 ~~~~iv~~C~---~G~rs~~aa~~L~~~G~~~v~~l 278 (296)
+++.|++++. +|.....++..|++.|-.+|+.+
T Consensus 123 ~~~~VllvDd~l~TG~T~~~a~~~L~~~G~~~I~~~ 158 (209)
T 1i5e_A 123 EERDFIIVDPMLATGGSAVAAIDALKKRGAKSIKFM 158 (209)
T ss_dssp TTSEEEEECSEESSSHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCCEEEEEcCCCcCHHHHHHHHHHHHHcCCCEEEEE
Confidence 4568888865 99999999999999999887644
No 185
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics, ligase; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1
Probab=24.92 E-value=70 Score=28.96 Aligned_cols=29 Identities=21% Similarity=0.534 Sum_probs=24.4
Q ss_pred CCcEEEEeCCChhHHHHHHHHHHcCCCceE
Q 022496 247 QKDTYVMCHHGMRSLQVAQWLQTQGFRRVF 276 (296)
Q Consensus 247 ~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~ 276 (296)
..+||+-..+|..|..++.+|++.||+ |.
T Consensus 14 ~~KVVVA~SGGlDSSv~a~~Lke~G~e-Vi 42 (421)
T 1vl2_A 14 KEKVVLAYSGGLDTSVILKWLCEKGFD-VI 42 (421)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHTTCE-EE
T ss_pred cCCEEEEeCCcHHHHHHHHHHHHCCCe-EE
Confidence 456888888999999999999999985 54
No 186
>4fak_A Ribosomal RNA large subunit methyltransferase H; alpha/beta methyltransferase rossmann fold, rRNA methylation rRNA, ribosomal protein; HET: SAM PG4; 1.70A {Staphylococcus aureus} PDB: 1vh0_A
Probab=24.72 E-value=42 Score=26.08 Aligned_cols=45 Identities=29% Similarity=0.334 Sum_probs=34.3
Q ss_pred cCCCCCCCcEEEEeCCC--hhHHHHHHHHHH---cCCCceEEccchHHHh
Q 022496 241 TVKFDPQKDTYVMCHHG--MRSLQVAQWLQT---QGFRRVFNVSGGIHAY 285 (296)
Q Consensus 241 ~~~~~~~~~iv~~C~~G--~rs~~aa~~L~~---~G~~~v~~l~GG~~~W 285 (296)
...++++..+|+.|..| ..|...|..|.. .|..++..+-||-.+.
T Consensus 68 l~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~g~~~i~FvIGG~~Gl 117 (163)
T 4fak_A 68 LAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGL 117 (163)
T ss_dssp HHTCCTTSEEEEEEEEEEECCHHHHHHHHHHHHHTTCCEEEEEECBTTBC
T ss_pred HHhCCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCcceEEEEECCCcc
Confidence 34467788888888877 578888888876 5888899888985443
No 187
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=24.19 E-value=62 Score=24.17 Aligned_cols=32 Identities=13% Similarity=0.091 Sum_probs=26.2
Q ss_pred CCCcEEEEe---CCChhHHHHHHHHHHcCCCceEE
Q 022496 246 PQKDTYVMC---HHGMRSLQVAQWLQTQGFRRVFN 277 (296)
Q Consensus 246 ~~~~iv~~C---~~G~rs~~aa~~L~~~G~~~v~~ 277 (296)
++++|++.+ .+|.....++..|++.|-..|..
T Consensus 82 ~gk~VllVDDvitTG~Tl~~a~~~L~~~ga~~v~~ 116 (153)
T 1vdm_A 82 KDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKI 116 (153)
T ss_dssp BTCEEEEEEEEESSCHHHHHHHHHHHTTTBSEEEE
T ss_pred CCCEEEEEecccCChHHHHHHHHHHHHcCCCEEEE
Confidence 577888886 49999999999999999876643
No 188
>1wp9_A ATP-dependent RNA helicase, putative; ATPase, DNA replication, DNA repair, DNA recombina hydrolase; 2.90A {Pyrococcus furiosus} SCOP: c.37.1.19 c.37.1.19
Probab=23.92 E-value=69 Score=28.22 Aligned_cols=35 Identities=11% Similarity=0.167 Sum_probs=30.6
Q ss_pred CCCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccc
Q 022496 245 DPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSG 280 (296)
Q Consensus 245 ~~~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~G 280 (296)
..+.++|++|.+-..+...+..|...|+. +..+.|
T Consensus 359 ~~~~k~lVF~~~~~~~~~l~~~L~~~~~~-~~~~~g 393 (494)
T 1wp9_A 359 KQNSKIIVFTNYRETAKKIVNELVKDGIK-AKRFVG 393 (494)
T ss_dssp CTTCCEEEECSCHHHHHHHHHHHHHTTCC-EEEECC
T ss_pred CCCCeEEEEEccHHHHHHHHHHHHHcCCC-cEEEec
Confidence 45789999999988888999999999984 888888
No 189
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=23.59 E-value=92 Score=26.63 Aligned_cols=39 Identities=13% Similarity=0.247 Sum_probs=29.0
Q ss_pred CCCCCcEEEEeCCChhHHHHHHHHHHc----CCCce--EEccchH
Q 022496 244 FDPQKDTYVMCHHGMRSLQVAQWLQTQ----GFRRV--FNVSGGI 282 (296)
Q Consensus 244 ~~~~~~iv~~C~~G~rs~~aa~~L~~~----G~~~v--~~l~GG~ 282 (296)
+.++++|++-+.+|..|..++..|.+. |++++ ..++-|+
T Consensus 21 ~~~~~~vlva~SGG~DS~~Ll~ll~~~~~~~g~~~v~av~vd~g~ 65 (317)
T 1wy5_A 21 FSGERRVLIAFSGGVDSVVLTDVLLKLKNYFSLKEVALAHFNHML 65 (317)
T ss_dssp CSSCCEEEEECCSSHHHHHHHHHHHHSTTTTTCSEEEEEEEECCS
T ss_pred CCCCCEEEEEecchHHHHHHHHHHHHHHHHcCCCEEEEEEEECCC
Confidence 356778999999999999999888875 77523 3455554
No 190
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=23.32 E-value=1e+02 Score=22.78 Aligned_cols=30 Identities=20% Similarity=0.177 Sum_probs=23.7
Q ss_pred EEEEeCCChhHHHHHHHHHHcCCCceEEccc
Q 022496 250 TYVMCHHGMRSLQVAQWLQTQGFRRVFNVSG 280 (296)
Q Consensus 250 iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~G 280 (296)
-|+.|..|......+..|...|+ +|.+++-
T Consensus 21 ~v~IiG~G~iG~~la~~L~~~g~-~V~vid~ 50 (155)
T 2g1u_A 21 YIVIFGCGRLGSLIANLASSSGH-SVVVVDK 50 (155)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cEEEECCCHHHHHHHHHHHhCCC-eEEEEEC
Confidence 35566789999999999999998 5776643
No 191
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=23.08 E-value=30 Score=29.13 Aligned_cols=68 Identities=9% Similarity=0.116 Sum_probs=44.9
Q ss_pred cEEEecCChHHHHhh-----CCCCceecccccccCCC---CCccCCCCCCCcEEEEeCCChhHHHHHHHHHHcCCCce
Q 022496 206 AQLIDVREPEEVALS-----SLPGFQVLPLRQFGSWG---PDITVKFDPQKDTYVMCHHGMRSLQVAQWLQTQGFRRV 275 (296)
Q Consensus 206 ~~llDvR~~~ey~~g-----hIpgA~~ip~~~l~~~~---~~~~~~~~~~~~iv~~C~~G~rs~~aa~~L~~~G~~~v 275 (296)
..++.|.+..|.+.. .|-|-.|-.+.+|.... ..+.+.+|. .+++.|.+|..+..-+..|+..|++.+
T Consensus 155 ~~LvEVh~~~El~rAl~~~a~iIGINNRnL~tf~vdl~~t~~L~~~ip~--~~~~VsESGI~t~~dv~~l~~~G~~a~ 230 (258)
T 4a29_A 155 EPLILINDENDLDIALRIGARFIGIMSRDFETGEINKENQRKLISMIPS--NVVKVAKLGISERNEIEELRKLGVNAF 230 (258)
T ss_dssp CCEEEESSHHHHHHHHHTTCSEEEECSBCTTTCCBCHHHHHHHHTTSCT--TSEEEEEESSCCHHHHHHHHHTTCCEE
T ss_pred HHHHhcchHHHHHHHhcCCCcEEEEeCCCccccccCHHHHHHHHhhCCC--CCEEEEcCCCCCHHHHHHHHHCCCCEE
Confidence 368999999887542 33344455555554321 122334554 456778999999999999999999644
No 192
>1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase, substrate specificity, residue shift, signaling protein; HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB: 1gwz_A
Probab=22.53 E-value=53 Score=27.71 Aligned_cols=18 Identities=17% Similarity=0.021 Sum_probs=14.0
Q ss_pred CCCCcEEEEeCCC-hhHHH
Q 022496 245 DPQKDTYVMCHHG-MRSLQ 262 (296)
Q Consensus 245 ~~~~~iv~~C~~G-~rs~~ 262 (296)
+.+.+|||+|..| +|+..
T Consensus 202 ~~~~pivVHCsaGvGRTGt 220 (284)
T 1fpr_A 202 PHAGPIIVHSSAGIGRTGT 220 (284)
T ss_dssp TTCCCEEEESSBSSHHHHH
T ss_pred CCCCcEEEEcCCCCcHHHH
Confidence 4678999999977 67653
No 193
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=22.27 E-value=79 Score=24.20 Aligned_cols=32 Identities=9% Similarity=0.066 Sum_probs=26.5
Q ss_pred CCCcEEEEeC---CChhHHHHHHHHHHcCCCceEE
Q 022496 246 PQKDTYVMCH---HGMRSLQVAQWLQTQGFRRVFN 277 (296)
Q Consensus 246 ~~~~iv~~C~---~G~rs~~aa~~L~~~G~~~v~~ 277 (296)
++++|++.+. +|.....++..|++.|-..|..
T Consensus 119 ~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~V~~ 153 (175)
T 1vch_A 119 LNQRVVLVSDVVASGETMRAMEKMVLRAGGHVVAR 153 (175)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCeEEEE
Confidence 5788998864 9999999999999999876643
No 194
>3t38_A Arsenate reductase; low molecular weight tyrosine phosphatase fold, reduction of to arsenite, oxidoreductase; 2.20A {Corynebacterium glutamicum}
Probab=22.21 E-value=53 Score=26.70 Aligned_cols=37 Identities=24% Similarity=0.227 Sum_probs=28.2
Q ss_pred CCCcEEEEeCCC-hhHHHHHHHHHHcCCCceEEccchH
Q 022496 246 PQKDTYVMCHHG-MRSLQVAQWLQTQGFRRVFNVSGGI 282 (296)
Q Consensus 246 ~~~~iv~~C~~G-~rs~~aa~~L~~~G~~~v~~l~GG~ 282 (296)
...+|+|.|.+. -||..|..+|+.+.-.++.+...|.
T Consensus 80 ~~~~VLFVCtgN~cRSpmAEal~~~~~~~~~~v~SAGt 117 (213)
T 3t38_A 80 PVPQVLFICVHNAGRSQIASALLSHYAGSSVEVRSAGS 117 (213)
T ss_dssp CCCEEEEEESSSSSHHHHHHHHHHHHHGGGCEEEEEES
T ss_pred CCCEEEEECCCchhHHHHHHHHHHHhccCceEEEeccc
Confidence 457899999855 6999999999886434566777775
No 195
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=22.02 E-value=82 Score=24.53 Aligned_cols=32 Identities=16% Similarity=0.106 Sum_probs=26.6
Q ss_pred CCCcEEEEeC---CChhHHHHHHHHHHcCCCceEE
Q 022496 246 PQKDTYVMCH---HGMRSLQVAQWLQTQGFRRVFN 277 (296)
Q Consensus 246 ~~~~iv~~C~---~G~rs~~aa~~L~~~G~~~v~~ 277 (296)
++++|++.+. +|.+...++..|++.|-..|..
T Consensus 97 ~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~ 131 (185)
T 2geb_A 97 EGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKI 131 (185)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEE
Confidence 5778888864 9999999999999999877653
No 196
>4etm_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.60A {Bacillus subtilis}
Probab=21.90 E-value=62 Score=25.25 Aligned_cols=39 Identities=18% Similarity=0.330 Sum_probs=29.0
Q ss_pred CcEEEEeCCC-hhHHHHHHHHHH----cCCC-ceEEccchHHHhh
Q 022496 248 KDTYVMCHHG-MRSLQVAQWLQT----QGFR-RVFNVSGGIHAYA 286 (296)
Q Consensus 248 ~~iv~~C~~G-~rs~~aa~~L~~----~G~~-~v~~l~GG~~~W~ 286 (296)
.+|+|+|.+. -||..|-.+|+. .|.. .+.+..-|+.+|.
T Consensus 19 ~kVLFVCtGNiCRSpmAE~i~r~~~~~~gl~~~~~v~SAGt~~~~ 63 (173)
T 4etm_A 19 ISVLFVCLGNICRSPMAEAIFRDLAAKKGLEGKIKADSAGIGGWH 63 (173)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCTT
T ss_pred cEEEEEeCCcchhhHHHHHHHHHHHHHcCCCCceEEeccccccCC
Confidence 4799999744 599888777765 4664 4777778888885
No 197
>3sqn_A Conserved domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MGA family; 2.31A {Enterococcus faecalis}
Probab=21.64 E-value=49 Score=30.48 Aligned_cols=26 Identities=12% Similarity=0.058 Sum_probs=21.5
Q ss_pred CCCCcEEEEeCCC-hhHHHHHHHHHHc
Q 022496 245 DPQKDTYVMCHHG-MRSLQVAQWLQTQ 270 (296)
Q Consensus 245 ~~~~~iv~~C~~G-~rs~~aa~~L~~~ 270 (296)
.+.+++||+|++| +.|...-..|+++
T Consensus 396 ~~~~~~~vVC~~GigtS~lL~~~L~~~ 422 (485)
T 3sqn_A 396 AQTMTAYFLFQGEPAWKAFLQQELAAY 422 (485)
T ss_dssp CCSEEEEEECCSCHHHHHHHHHHHHHH
T ss_pred cccceEEEECCCchhHHHHHHHHHHHh
Confidence 4667899999999 5777888888886
No 198
>3eiq_A Eukaryotic initiation factor 4A-I; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Homo sapiens}
Probab=21.63 E-value=47 Score=28.98 Aligned_cols=38 Identities=8% Similarity=0.179 Sum_probs=29.3
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccchHHH
Q 022496 246 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHA 284 (296)
Q Consensus 246 ~~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~ 284 (296)
...+++++|++-..+...+..|...|+. +..+.|++..
T Consensus 279 ~~~~~lvf~~~~~~~~~l~~~l~~~~~~-~~~~h~~~~~ 316 (414)
T 3eiq_A 279 TITQAVIFINTRRKVDWLTEKMHARDFT-VSAMHGDMDQ 316 (414)
T ss_dssp CCSSCEEECSCHHHHHHHHHHHHTTTCC-CEEC---CHH
T ss_pred CCCcEEEEeCCHHHHHHHHHHHHhcCCe-EEEecCCCCH
Confidence 3468999999988889999999999984 8889998643
No 199
>3gh1_A Predicted nucleotide-binding protein; structural genomics, protein structure initiative; 1.90A {Vibrio cholerae o1 biovar el tor str} PDB: 2pmb_A
Probab=21.59 E-value=83 Score=28.70 Aligned_cols=29 Identities=10% Similarity=0.005 Sum_probs=20.5
Q ss_pred CCCCcEEEEeCCCh-------hHHHHHHHHHHcCCC
Q 022496 245 DPQKDTYVMCHHGM-------RSLQVAQWLQTQGFR 273 (296)
Q Consensus 245 ~~~~~iv~~C~~G~-------rs~~aa~~L~~~G~~ 273 (296)
.+..+|++||.+.. .+...+.+|.+.||.
T Consensus 144 ~r~~~IvV~cGSs~~~p~yye~A~eLGr~LA~~G~~ 179 (462)
T 3gh1_A 144 GATPNLVVCWGGHSINEVEYQYTREVGHELGLRELN 179 (462)
T ss_dssp TCCSCEEEEECCSSCCHHHHHHHHHHHHHHHHTTCE
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCE
Confidence 46778999999653 234556677788885
No 200
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=21.57 E-value=83 Score=24.27 Aligned_cols=32 Identities=13% Similarity=0.046 Sum_probs=26.6
Q ss_pred CCCCcEEEEe---CCChhHHHHHHHHHHcCCCceE
Q 022496 245 DPQKDTYVMC---HHGMRSLQVAQWLQTQGFRRVF 276 (296)
Q Consensus 245 ~~~~~iv~~C---~~G~rs~~aa~~L~~~G~~~v~ 276 (296)
.++++|++.+ .+|.....++..|++.|-..|.
T Consensus 118 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~ 152 (180)
T 1zn8_A 118 EPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLE 152 (180)
T ss_dssp CTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEEcCCcccHHHHHHHHHHHHHcCCEEEE
Confidence 4678898886 4999999999999999987654
No 201
>4grz_A Tyrosine-protein phosphatase non-receptor type 6; phosphatase domain, hydrolase; 1.37A {Homo sapiens} PDB: 4gry_A 4gs0_A* 1gwz_A 1fpr_A*
Probab=21.27 E-value=64 Score=27.24 Aligned_cols=18 Identities=17% Similarity=0.021 Sum_probs=13.9
Q ss_pred CCCCcEEEEeCCC-hhHHH
Q 022496 245 DPQKDTYVMCHHG-MRSLQ 262 (296)
Q Consensus 245 ~~~~~iv~~C~~G-~rs~~ 262 (296)
+...||||+|..| +|+..
T Consensus 204 ~~~~PivVHCsaGvGRTGt 222 (288)
T 4grz_A 204 PHAGPIIVHSSAGIGRTGT 222 (288)
T ss_dssp TTCCCEEEECSSSSHHHHH
T ss_pred CCCCcEEEEeCCCCcHHHH
Confidence 4578999999977 67653
No 202
>2kxh_B Peptide of FAR upstream element-binding protein 1; RRM, FIR, FBP, protein-protein complex, protein binding; NMR {Homo sapiens}
Probab=21.26 E-value=6.5 Score=21.30 Aligned_cols=11 Identities=36% Similarity=0.377 Sum_probs=8.1
Q ss_pred cccccCCchhh
Q 022496 3 LRASQLASPVL 13 (296)
Q Consensus 3 ~~~~~~~~~~~ 13 (296)
=||+||+.++.
T Consensus 15 ~RaRQIaAKig 25 (31)
T 2kxh_B 15 QRARQIAAKIG 25 (31)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHhc
Confidence 37888887765
No 203
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=21.13 E-value=1e+02 Score=26.53 Aligned_cols=34 Identities=15% Similarity=0.132 Sum_probs=29.1
Q ss_pred CCCcEEEEeC---CChhHHHHHHHHHHcCCCceEEcc
Q 022496 246 PQKDTYVMCH---HGMRSLQVAQWLQTQGFRRVFNVS 279 (296)
Q Consensus 246 ~~~~iv~~C~---~G~rs~~aa~~L~~~G~~~v~~l~ 279 (296)
+++.+++.+. +|.+...++..|++.|-..|+.+.
T Consensus 216 ~gk~VlLVDDiitTG~Tl~~aa~~Lk~~Ga~~V~~~~ 252 (317)
T 1dku_A 216 EGKTAILIDDIIDTAGTITLAANALVENGAKEVYACC 252 (317)
T ss_dssp TTCEEEEECSEESSCHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCEEEEEecccCCCHHHHHHHHHHHHcCCcEEEEEE
Confidence 5788998854 999999999999999998887655
No 204
>1c4o_A DNA nucleotide excision repair enzyme UVRB; uvrabc, helicase, hypertherm protein, replication; HET: DNA BOG; 1.50A {Thermus thermophilus} SCOP: c.37.1.19 c.37.1.19 PDB: 1d2m_A*
Probab=21.11 E-value=68 Score=30.79 Aligned_cols=36 Identities=14% Similarity=0.143 Sum_probs=31.7
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccchH
Q 022496 246 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGI 282 (296)
Q Consensus 246 ~~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~ 282 (296)
++.++||+|.+-.++...+..|.+.|+ ++..+.|++
T Consensus 438 ~~~~vlVf~~t~~~ae~L~~~L~~~gi-~~~~lh~~~ 473 (664)
T 1c4o_A 438 RGERTLVTVLTVRMAEELTSFLVEHGI-RARYLHHEL 473 (664)
T ss_dssp TTCEEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTC
T ss_pred cCCEEEEEECCHHHHHHHHHHHHhcCC-CceeecCCC
Confidence 577999999999999999999999999 477788875
No 205
>1to0_A Hypothetical UPF0247 protein YYDA; structural genomics, unknown function, PSI, protein structure initiative; 2.50A {Bacillus subtilis} SCOP: c.116.1.3
Probab=21.01 E-value=66 Score=25.08 Aligned_cols=44 Identities=23% Similarity=0.308 Sum_probs=32.6
Q ss_pred CCCCCCcEEEEeCCC--hhHHHHHHHHHH---cCCCceEEccchHHHhh
Q 022496 243 KFDPQKDTYVMCHHG--MRSLQVAQWLQT---QGFRRVFNVSGGIHAYA 286 (296)
Q Consensus 243 ~~~~~~~iv~~C~~G--~rs~~aa~~L~~---~G~~~v~~l~GG~~~W~ 286 (296)
.++++..+|+.|..| ..|...|..|.. .|..++..+-||-.++.
T Consensus 66 ~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~G~~~i~FvIGGa~Gl~ 114 (167)
T 1to0_A 66 KISPDAHVIALAIEGKMKTSEELADTIDKLATYGKSKVTFVIGGSLGLS 114 (167)
T ss_dssp TSCTTSEEEEEEEEEEECCHHHHHHHHHHHHTTTCCEEEEEECCSSCCC
T ss_pred hcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCceEEEEEECCCCCC
Confidence 345565588888877 588888888876 58778988889865544
No 206
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=20.81 E-value=98 Score=24.16 Aligned_cols=32 Identities=13% Similarity=0.074 Sum_probs=26.8
Q ss_pred CCCCcEEEEeC---CChhHHHHHHHHHHcCCCceE
Q 022496 245 DPQKDTYVMCH---HGMRSLQVAQWLQTQGFRRVF 276 (296)
Q Consensus 245 ~~~~~iv~~C~---~G~rs~~aa~~L~~~G~~~v~ 276 (296)
.++++|++.+. +|.....++..|++.|-..|.
T Consensus 124 ~~gk~VLlVDDvitTG~Tl~~a~~~L~~~Ga~~V~ 158 (190)
T 2dy0_A 124 KPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVAD 158 (190)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEE
T ss_pred CCcCEEEEEEccccchHHHHHHHHHHHHcCCEEEE
Confidence 46888999864 999999999999999987653
No 207
>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1
Probab=20.78 E-value=73 Score=28.58 Aligned_cols=28 Identities=18% Similarity=0.152 Sum_probs=25.0
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCC
Q 022496 246 PQKDTYVMCHHGMRSLQVAQWLQTQGFR 273 (296)
Q Consensus 246 ~~~~iv~~C~~G~rs~~aa~~L~~~G~~ 273 (296)
.+.++++-+.+|..|..++..|.+.|++
T Consensus 186 ~~~kvlvalSGGvDS~vll~ll~~~G~~ 213 (413)
T 2c5s_A 186 VGGKVMVLLSGGIDSPVAAYLTMKRGVS 213 (413)
T ss_dssp TTEEEEEECCSSSHHHHHHHHHHHBTEE
T ss_pred CCCeEEEEeCCCChHHHHHHHHHHcCCc
Confidence 4678999999999999999999999985
No 208
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=20.66 E-value=1e+02 Score=21.93 Aligned_cols=29 Identities=14% Similarity=0.215 Sum_probs=21.6
Q ss_pred EEEeCCChhHHHHHHHHHHcCCCceEEccc
Q 022496 251 YVMCHHGMRSLQVAQWLQTQGFRRVFNVSG 280 (296)
Q Consensus 251 v~~C~~G~rs~~aa~~L~~~G~~~v~~l~G 280 (296)
|+.|..|......+..|.+.|+ +|.+++-
T Consensus 7 i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~ 35 (140)
T 1lss_A 7 IIIAGIGRVGYTLAKSLSEKGH-DIVLIDI 35 (140)
T ss_dssp EEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred EEEECCCHHHHHHHHHHHhCCC-eEEEEEC
Confidence 4555778888888888988887 4766643
No 209
>2d7d_A Uvrabc system protein B; helicase, protein-DNA-ADP ternary complex, hydrolase/DNA complex; HET: ADP; 2.10A {Bacillus subtilis} PDB: 2nmv_A* 2fdc_A* 1t5l_A 3uwx_B 1d9z_A* 1d9x_A 2d7d_B* 2nmv_B*
Probab=20.26 E-value=76 Score=30.44 Aligned_cols=37 Identities=16% Similarity=0.226 Sum_probs=32.1
Q ss_pred CCCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccchH
Q 022496 245 DPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGI 282 (296)
Q Consensus 245 ~~~~~iv~~C~~G~rs~~aa~~L~~~G~~~v~~l~GG~ 282 (296)
..+.+++|+|.+-.++...+..|.+.|+ ++..+.|++
T Consensus 443 ~~~~~vlVf~~t~~~ae~L~~~L~~~gi-~~~~lh~~~ 479 (661)
T 2d7d_A 443 ERNERVLVTTLTKKMSEDLTDYLKEIGI-KVNYLHSEI 479 (661)
T ss_dssp TTTCEEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTC
T ss_pred hcCCeEEEEECCHHHHHHHHHHHHhcCC-CeEEEeCCC
Confidence 4567999999999999999999999998 477788875
No 210
>1p15_A Protein-tyrosine phosphatase alpha; transmembrane, hydrolase, phosphorylation; 2.00A {Mus musculus} SCOP: c.45.1.2
Probab=20.17 E-value=65 Score=26.61 Aligned_cols=18 Identities=22% Similarity=0.270 Sum_probs=13.7
Q ss_pred CCCCcEEEEeCCC-hhHHH
Q 022496 245 DPQKDTYVMCHHG-MRSLQ 262 (296)
Q Consensus 245 ~~~~~iv~~C~~G-~rs~~ 262 (296)
....+|||+|..| +|+..
T Consensus 174 ~~~~pivVHCsaGvGRTGt 192 (253)
T 1p15_A 174 SGNHPITVHCSAGAGRTGT 192 (253)
T ss_dssp TTSCCEEEESSSSSHHHHH
T ss_pred cCCCCEEEEcCCCCchhHH
Confidence 3567999999977 57653
Done!