BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022500
(296 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 416 bits (1068), Expect = e-116, Method: Compositional matrix adjust.
Identities = 192/286 (67%), Positives = 237/286 (82%), Gaps = 2/286 (0%)
Query: 1 MRVMDHPNVISLKHCFFST-TSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
MR +DH N++ L++ F+S+ K+E++LNLV++YVPE++YRV +HYS A Q +P+IYVKL
Sbjct: 95 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 154
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y YQ+FR LAYIH+ +CHRD+KPQNLL+DP T +K+CDFGSAKQL+ GE N+SYICS
Sbjct: 155 YMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 213
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE
Sbjct: 214 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 273
Query: 180 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH F
Sbjct: 274 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 333
Query: 240 FDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQ 285
FDELR+PN +LPNGR P LFNF + ++P L LIP H + Q
Sbjct: 334 FDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQ 379
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 415 bits (1067), Expect = e-116, Method: Compositional matrix adjust.
Identities = 192/286 (67%), Positives = 237/286 (82%), Gaps = 2/286 (0%)
Query: 1 MRVMDHPNVISLKHCFFSTT-SKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
MR +DH N++ L++ F+S+ K+E++LNLV++YVPE++YRV +HYS A Q +P+IYVKL
Sbjct: 146 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 205
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y YQ+FR LAYIH+ +CHRD+KPQNLL+DP T +K+CDFGSAKQL+ GE N+SYICS
Sbjct: 206 YMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 264
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE
Sbjct: 265 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 324
Query: 180 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH F
Sbjct: 325 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 384
Query: 240 FDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQ 285
FDELR+PN +LPNGR P LFNF + ++P L LIP H + Q
Sbjct: 385 FDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQ 430
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 415 bits (1067), Expect = e-116, Method: Compositional matrix adjust.
Identities = 192/286 (67%), Positives = 237/286 (82%), Gaps = 2/286 (0%)
Query: 1 MRVMDHPNVISLKHCFFST-TSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
MR +DH N++ L++ F+S+ K+E++LNLV++YVPE++YRV +HYS A Q +P+IYVKL
Sbjct: 101 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 160
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y YQ+FR LAYIH+ +CHRD+KPQNLL+DP T +K+CDFGSAKQL+ GE N+SYICS
Sbjct: 161 YMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 219
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE
Sbjct: 220 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 279
Query: 180 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH F
Sbjct: 280 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 339
Query: 240 FDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQ 285
FDELR+PN +LPNGR P LFNF + ++P L LIP H + Q
Sbjct: 340 FDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQ 385
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 415 bits (1067), Expect = e-116, Method: Compositional matrix adjust.
Identities = 192/286 (67%), Positives = 237/286 (82%), Gaps = 2/286 (0%)
Query: 1 MRVMDHPNVISLKHCFFST-TSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
MR +DH N++ L++ F+S+ K+E++LNLV++YVPE++YRV +HYS A Q +P+IYVKL
Sbjct: 72 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 131
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y YQ+FR LAYIH+ +CHRD+KPQNLL+DP T +K+CDFGSAKQL+ GE N+SYICS
Sbjct: 132 YMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 190
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE
Sbjct: 191 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 250
Query: 180 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH F
Sbjct: 251 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 310
Query: 240 FDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQ 285
FDELR+PN +LPNGR P LFNF + ++P L LIP H + Q
Sbjct: 311 FDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQ 356
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 415 bits (1067), Expect = e-116, Method: Compositional matrix adjust.
Identities = 192/286 (67%), Positives = 237/286 (82%), Gaps = 2/286 (0%)
Query: 1 MRVMDHPNVISLKHCFFSTT-SKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
MR +DH N++ L++ F+S+ K+E++LNLV++YVPE++YRV +HYS A Q +P+IYVKL
Sbjct: 105 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 164
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y YQ+FR LAYIH+ +CHRD+KPQNLL+DP T +K+CDFGSAKQL+ GE N+SYICS
Sbjct: 165 YMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 223
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE
Sbjct: 224 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 283
Query: 180 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH F
Sbjct: 284 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 343
Query: 240 FDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQ 285
FDELR+PN +LPNGR P LFNF + ++P L LIP H + Q
Sbjct: 344 FDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQ 389
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 415 bits (1066), Expect = e-116, Method: Compositional matrix adjust.
Identities = 192/286 (67%), Positives = 237/286 (82%), Gaps = 2/286 (0%)
Query: 1 MRVMDHPNVISLKHCFFST-TSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
MR +DH N++ L++ F+S+ K+E++LNLV++YVPE++YRV +HYS A Q +P+IYVKL
Sbjct: 103 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 162
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y YQ+FR LAYIH+ +CHRD+KPQNLL+DP T +K+CDFGSAKQL+ GE N+SYICS
Sbjct: 163 YMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 221
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE
Sbjct: 222 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 281
Query: 180 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH F
Sbjct: 282 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 341
Query: 240 FDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQ 285
FDELR+PN +LPNGR P LFNF + ++P L LIP H + Q
Sbjct: 342 FDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQ 387
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 414 bits (1063), Expect = e-116, Method: Compositional matrix adjust.
Identities = 192/286 (67%), Positives = 237/286 (82%), Gaps = 2/286 (0%)
Query: 1 MRVMDHPNVISLKHCFFST-TSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
MR +DH N++ L++ F+S+ K+E++LNLV++YVPE++YRV +HYS A Q +P+IYVKL
Sbjct: 80 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 139
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y YQ+FR LAYIH+ +CHRD+KPQNLL+DP T +K+CDFGSAKQL+ GE N+SYICS
Sbjct: 140 YMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 198
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE
Sbjct: 199 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 258
Query: 180 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH F
Sbjct: 259 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 318
Query: 240 FDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQ 285
FDELR+PN +LPNGR P LFNF + ++P L LIP H + Q
Sbjct: 319 FDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQ 364
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 412 bits (1060), Expect = e-116, Method: Compositional matrix adjust.
Identities = 191/284 (67%), Positives = 236/284 (83%), Gaps = 2/284 (0%)
Query: 1 MRVMDHPNVISLKHCFFST-TSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
MR +DH N++ L++ F+S+ K+E++LNLV++YVPE++YRV +HYS A Q +P+IYVKL
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y YQ+FR LAYIH+ +CHRD+KPQNLL+DP T +K+CDFGSAKQL+ GE N+SYICS
Sbjct: 127 YMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 185
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
Query: 180 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH F
Sbjct: 246 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
Query: 240 FDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVK 283
FDELR+PN +LPNGR P LFNF + ++P L LIP H +
Sbjct: 306 FDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHAR 349
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 412 bits (1060), Expect = e-116, Method: Compositional matrix adjust.
Identities = 191/286 (66%), Positives = 236/286 (82%), Gaps = 2/286 (0%)
Query: 1 MRVMDHPNVISLKHCFFST-TSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
MR +DH N++ L++ F+S+ K+E++LNLV++YVPE++YRV +HYS A Q +P+IYVKL
Sbjct: 101 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 160
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y YQ+FR LAYIH+ +CHRD+KPQNLL+DP T +K+CDFGSAKQL+ GE N+S ICS
Sbjct: 161 YMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 219
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE
Sbjct: 220 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 279
Query: 180 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH F
Sbjct: 280 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 339
Query: 240 FDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQ 285
FDELR+PN +LPNGR P LFNF + ++P L LIP H + Q
Sbjct: 340 FDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQ 385
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 412 bits (1060), Expect = e-116, Method: Compositional matrix adjust.
Identities = 191/284 (67%), Positives = 236/284 (83%), Gaps = 2/284 (0%)
Query: 1 MRVMDHPNVISLKHCFFST-TSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
MR +DH N++ L++ F+S+ K+E++LNLV++YVPE++YRV +HYS A Q +P+IYVKL
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y YQ+FR LAYIH+ +CHRD+KPQNLL+DP T +K+CDFGSAKQL+ GE N+SYICS
Sbjct: 127 YMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 185
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
Query: 180 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH F
Sbjct: 246 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
Query: 240 FDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVK 283
FDELR+PN +LPNGR P LFNF + ++P L LIP H +
Sbjct: 306 FDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHAR 349
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 412 bits (1059), Expect = e-115, Method: Compositional matrix adjust.
Identities = 192/286 (67%), Positives = 236/286 (82%), Gaps = 2/286 (0%)
Query: 1 MRVMDHPNVISLKHCFFST-TSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
MR +DH N++ L++ F+S+ K+E++LNLV++YVPE++YRV +HYS A Q +P+IYVKL
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y YQ+FR LAYIH+ +CHRD+KPQNLL+DP T +K+CDFGSAKQL+ GE N+SYICS
Sbjct: 127 YMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 185
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
Query: 180 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+IR MNPNYT+F FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH F
Sbjct: 246 QIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
Query: 240 FDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQ 285
FDELR+PN +LPNGR P LFNF + ++P L LIP H + Q
Sbjct: 306 FDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQ 351
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 412 bits (1058), Expect = e-115, Method: Compositional matrix adjust.
Identities = 191/286 (66%), Positives = 236/286 (82%), Gaps = 2/286 (0%)
Query: 1 MRVMDHPNVISLKHCFFST-TSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
MR +DH N++ L++ F+S+ K+E++LNLV++YVPE++YRV +HYS A Q +P+IYVKL
Sbjct: 79 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 138
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y YQ+FR LAYIH+ +CHRD+KPQNLL+DP T +K+CDFGSAKQL+ GE N+S ICS
Sbjct: 139 YMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 197
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE
Sbjct: 198 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 257
Query: 180 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH F
Sbjct: 258 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 317
Query: 240 FDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQ 285
FDELR+PN +LPNGR P LFNF + ++P L LIP H + Q
Sbjct: 318 FDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQ 363
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 411 bits (1057), Expect = e-115, Method: Compositional matrix adjust.
Identities = 191/286 (66%), Positives = 236/286 (82%), Gaps = 2/286 (0%)
Query: 1 MRVMDHPNVISLKHCFFST-TSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
MR +DH N++ L++ F+S+ K+E++LNLV++YVPE++YRV +HYS A Q +P+IYVKL
Sbjct: 79 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 138
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y YQ+FR LAYIH+ +CHRD+KPQNLL+DP T +K+CDFGSAKQL+ GE N+S ICS
Sbjct: 139 YMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 197
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE
Sbjct: 198 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 257
Query: 180 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH F
Sbjct: 258 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 317
Query: 240 FDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQ 285
FDELR+PN +LPNGR P LFNF + ++P L LIP H + Q
Sbjct: 318 FDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQ 363
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 411 bits (1056), Expect = e-115, Method: Compositional matrix adjust.
Identities = 191/286 (66%), Positives = 236/286 (82%), Gaps = 2/286 (0%)
Query: 1 MRVMDHPNVISLKHCFFST-TSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
MR +DH N++ L++ F+S+ K+E++LNLV++YVPE++YRV +HYS A Q +P+IYVKL
Sbjct: 75 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 134
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y YQ+FR LAYIH+ +CHRD+KPQNLL+DP T +K+CDFGSAKQL+ GE N+S ICS
Sbjct: 135 YMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 193
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE
Sbjct: 194 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 253
Query: 180 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH F
Sbjct: 254 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 313
Query: 240 FDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQ 285
FDELR+PN +LPNGR P LFNF + ++P L LIP H + Q
Sbjct: 314 FDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQ 359
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 411 bits (1056), Expect = e-115, Method: Compositional matrix adjust.
Identities = 191/286 (66%), Positives = 236/286 (82%), Gaps = 2/286 (0%)
Query: 1 MRVMDHPNVISLKHCFFST-TSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
MR +DH N++ L++ F+S+ K+E++LNLV++YVPE++YRV +HYS A Q +P+IYVKL
Sbjct: 86 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y YQ+FR LAYIH+ +CHRD+KPQNLL+DP T +K+CDFGSAKQL+ GE N+S ICS
Sbjct: 146 YMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 204
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE
Sbjct: 205 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 264
Query: 180 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH F
Sbjct: 265 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 324
Query: 240 FDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQ 285
FDELR+PN +LPNGR P LFNF + ++P L LIP H + Q
Sbjct: 325 FDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQ 370
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 410 bits (1054), Expect = e-115, Method: Compositional matrix adjust.
Identities = 191/286 (66%), Positives = 236/286 (82%), Gaps = 2/286 (0%)
Query: 1 MRVMDHPNVISLKHCFFST-TSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
MR +DH N++ L++ F+S+ K+E++LNLV++YVPE++YRV +HYS A Q +P+IYVKL
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y YQ+FR LAYIH+ +CHRD+KPQNLL+DP T +K+CDFGSAKQL+ GE N+S ICS
Sbjct: 127 YMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 185
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
Query: 180 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH F
Sbjct: 246 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
Query: 240 FDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQ 285
FDELR+PN +LPNGR P LFNF + ++P L LIP H + Q
Sbjct: 306 FDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQ 351
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 410 bits (1053), Expect = e-115, Method: Compositional matrix adjust.
Identities = 190/284 (66%), Positives = 235/284 (82%), Gaps = 2/284 (0%)
Query: 1 MRVMDHPNVISLKHCFFST-TSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
MR +DH N++ L++ F+S+ K+E++LNLV++YVPE++YRV +HYS A Q +P+IYVKL
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y YQ+FR LAYIH+ +CHRD+KPQNLL+DP T +K+CDFGSAKQL+ GE N+S ICS
Sbjct: 127 YMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 185
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
Query: 180 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH F
Sbjct: 246 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
Query: 240 FDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVK 283
FDELR+PN +LPNGR P LFNF + ++P L LIP H +
Sbjct: 306 FDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHAR 349
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 409 bits (1052), Expect = e-115, Method: Compositional matrix adjust.
Identities = 190/284 (66%), Positives = 235/284 (82%), Gaps = 2/284 (0%)
Query: 1 MRVMDHPNVISLKHCFFST-TSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
MR +DH N++ L++ F+S+ K+E++LNLV++YVPE++YRV +HYS A Q +P+IYVKL
Sbjct: 68 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 127
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y YQ+FR LAYIH+ +CHRD+KPQNLL+DP T +K+CDFGSAKQL+ GE N+S ICS
Sbjct: 128 YMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 186
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE
Sbjct: 187 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 246
Query: 180 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH F
Sbjct: 247 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 306
Query: 240 FDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVK 283
FDELR+PN +LPNGR P LFNF + ++P L LIP H +
Sbjct: 307 FDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHAR 350
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 409 bits (1052), Expect = e-115, Method: Compositional matrix adjust.
Identities = 190/284 (66%), Positives = 235/284 (82%), Gaps = 2/284 (0%)
Query: 1 MRVMDHPNVISLKHCFFST-TSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
MR +DH N++ L++ F+S+ K+E++LNLV++YVPE++YRV +HYS A Q +P+IYVKL
Sbjct: 71 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 130
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y YQ+FR LAYIH+ +CHRD+KPQNLL+DP T +K+CDFGSAKQL+ GE N+S ICS
Sbjct: 131 YMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 189
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE
Sbjct: 190 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 249
Query: 180 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH F
Sbjct: 250 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 309
Query: 240 FDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVK 283
FDELR+PN +LPNGR P LFNF + ++P L LIP H +
Sbjct: 310 FDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHAR 353
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 407 bits (1047), Expect = e-114, Method: Compositional matrix adjust.
Identities = 189/284 (66%), Positives = 234/284 (82%), Gaps = 2/284 (0%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
MR +DH N++ L++ F+S+ K ++ +LNLV++YVPE++YRV +HYS A Q +P+IYVKL
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y YQ+FR LAYIH+ +CHRD+KPQNLL+DP T +K+CDFGSAKQL+ GE N+S ICS
Sbjct: 127 YMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 185
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
Query: 180 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH F
Sbjct: 246 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
Query: 240 FDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVK 283
FDELR+PN +LPNGR P LFNF + ++P L LIP H +
Sbjct: 306 FDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHAR 349
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 406 bits (1043), Expect = e-114, Method: Compositional matrix adjust.
Identities = 189/284 (66%), Positives = 233/284 (82%), Gaps = 2/284 (0%)
Query: 1 MRVMDHPNVISLKHCFFST-TSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
MR +DH N++ L++ F+S+ K+E++LNLV++YVP ++YRV +HYS A Q +P+IYVKL
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKL 126
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y YQ+FR LAYIH+ +CHRD+KPQNLL+DP T +K+CDFGSAKQL+ GE N+S ICS
Sbjct: 127 YMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 185
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
Query: 180 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+IR MNPNYT+F FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH F
Sbjct: 246 QIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
Query: 240 FDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVK 283
FDELR+PN +LPNGR P LFNF + ++P L LIP H +
Sbjct: 306 FDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHAR 349
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 392 bits (1006), Expect = e-109, Method: Compositional matrix adjust.
Identities = 179/287 (62%), Positives = 230/287 (80%), Gaps = 2/287 (0%)
Query: 1 MRVMDHPNVISLKHCFFST-TSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
MR++ HPNV+ LK F+S K+E+FLNLV+EYVPE++YR +HY+ Q MP++ +KL
Sbjct: 86 MRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKL 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y YQ+ R LAYIH++ +CHRD+KPQNLL+DP + +K+ DFGSAK LIAGE N+S ICS
Sbjct: 146 YMYQLLRSLAYIHSI-GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICS 204
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPELIFGAT YTT+IDIWS GCV+AEL+ GQPLFPGE+ +DQLVEIIKVLGTP+RE
Sbjct: 205 RYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSRE 264
Query: 180 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+I+ MNPNY + +FPQI+ HP+ KVF R PP+AIDL SRLL+Y+PS R TA+EA HPF
Sbjct: 265 QIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPF 324
Query: 240 FDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQL 286
FDELR AR+PNGR LPPLFN+ +E P+L+++L+P H + +L
Sbjct: 325 FDELRTGEARMPNGRELPPLFNWTKEELSVRPDLISRLVPQHAEAEL 371
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 280 bits (716), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 141/324 (43%), Positives = 208/324 (64%), Gaps = 44/324 (13%)
Query: 1 MRVMDHPNVISLKHCFFSTTSK-----------NEL----------------------FL 27
M+V+DH N+I L F++T + N+L +L
Sbjct: 54 MKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYL 113
Query: 28 NLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNL 87
N++MEYVP+++++VLK + + + +P+ + +Y YQ+FR + +IH++ +CHRD+KPQNL
Sbjct: 114 NVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL-GICHRDIKPQNL 172
Query: 88 LVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVL 147
LV+ + +K+CDFGSAK+LI E +++ ICSRFYRAPEL+ GATEYT SID+WS GCV
Sbjct: 173 LVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232
Query: 148 AELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHK 207
EL+LG+PLF GE ++DQLV II+++GTPT+E++ MNP+YT+ RFP +KA W K+ +
Sbjct: 233 GELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPE 292
Query: 208 RMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP-------NARLPNG--RPLPP 258
P AIDL ++L+Y P LR EA AHPFFD LR N+ P+G + +P
Sbjct: 293 GTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNSYESEVKNNSNFPHGVNQNIPQ 352
Query: 259 LFNFK-QELSGASPELVNKLIPDH 281
LFNF ELS ++N+++P +
Sbjct: 353 LFNFSPYELSIIPGNVLNRILPKN 376
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 254 bits (648), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 122/269 (45%), Positives = 178/269 (66%), Gaps = 7/269 (2%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKN--ELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVK 58
+ V+ HPN++ L+ F++ ++ +++LN+VMEYVP++++R ++Y P I +K
Sbjct: 73 LAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIK 132
Query: 59 LYTYQIFRGLAYIHT-VPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYI 117
++ +Q+ R + +H VCHRD+KP N+LV+ +K+CDFGSAK+L E N++YI
Sbjct: 133 VFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYI 192
Query: 118 CSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 177
CSR+YRAPELIFG YTT++DIWS GC+ AE++LG+P+F G+N+ QL EI++VLG P+
Sbjct: 193 CSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPS 252
Query: 178 REEIRCMNPNYTDFRFPQIKAHPWHKVFHK---RMPPEAIDLASRLLQYSPSLRCTALEA 234
RE +R +NP++TD K PW VF + EA DL S LLQY P R EA
Sbjct: 253 REVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEA 312
Query: 235 CAHPFFDELREPNARLPNGRPLP-PLFNF 262
HP+FDEL +P +LPN + LP LF F
Sbjct: 313 LCHPYFDELHDPATKLPNNKDLPEDLFRF 341
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 167 bits (423), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 100/287 (34%), Positives = 157/287 (54%), Gaps = 21/287 (7%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIF 65
H NVI ++ ++T + + +V + + +Y++LK +N ++ + YQI
Sbjct: 100 HENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSND-----HICYFLYQIL 154
Query: 66 RGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISY----ICSRF 121
RGL YIH+ V HRDLKP NLL++ T +KICDFG A+ + + + +R+
Sbjct: 155 RGLKYIHSA-NVLHRDLKPSNLLINT-TCDLKICDFGLARIADPEHDHTGFLTEXVATRW 212
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
YRAPE++ + YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 272
Query: 182 RCM----NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
C+ NY P W K+F K +A+DL R+L ++P+ R T EA AH
Sbjct: 273 NCIINMKARNYLQ-SLPSKTKVAWAKLFPKS-DSKALDLLDRMLTFNPNKRITVEEALAH 330
Query: 238 PFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKR 284
P+ ++ +P P F F EL E + +LI R
Sbjct: 331 PYLEQYYDPTDEPVAEEP----FTFAMELDDLPKERLKELIFQETAR 373
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 164 bits (414), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 156/287 (54%), Gaps = 21/287 (7%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIF 65
H N+I + + T + + +V + + +Y++LK +N ++ + YQI
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQIL 138
Query: 66 RGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS----YICSRF 121
RGL YIH+ V HRDLKP NLL++ T +KICDFG A+ + Y+ +R+
Sbjct: 139 RGLKYIHSA-NVLHRDLKPSNLLLNT-TXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
YRAPE++ + YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 256
Query: 182 RCM----NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
C+ NY P PW+++F +A+DL ++L ++P R +A AH
Sbjct: 257 NCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 238 PFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKR 284
P+ ++ +P+ P F F EL E + +LI + R
Sbjct: 315 PYLEQYYDPSDEPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 357
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 163 bits (413), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 156/287 (54%), Gaps = 21/287 (7%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIF 65
H N+I + + T + + +V + + +Y++LK +N ++ + YQI
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQIL 138
Query: 66 RGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS----YICSRF 121
RGL YIH+ V HRDLKP NLL++ T +KICDFG A+ + Y+ +R+
Sbjct: 139 RGLKYIHSA-NVLHRDLKPSNLLLNT-TXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
YRAPE++ + YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 256
Query: 182 RCM----NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
C+ NY P PW+++F +A+DL ++L ++P R +A AH
Sbjct: 257 NCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 238 PFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKR 284
P+ ++ +P+ P F F EL E + +LI + R
Sbjct: 315 PYLEQYYDPSDEPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 357
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 156/287 (54%), Gaps = 21/287 (7%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIF 65
H N+I + + T + + +V + + +Y++LK +N ++ + YQI
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQIL 134
Query: 66 RGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS----YICSRF 121
RGL YIH+ V HRDLKP NLL++ T +KICDFG A+ + Y+ +R+
Sbjct: 135 RGLKYIHSA-NVLHRDLKPSNLLLNT-TXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
YRAPE++ + YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 252
Query: 182 RCM----NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
C+ NY P PW+++F +A+DL ++L ++P R +A AH
Sbjct: 253 NCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAH 310
Query: 238 PFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKR 284
P+ ++ +P+ P F F EL E + +LI + R
Sbjct: 311 PYLEQYYDPSDEPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 353
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 155/287 (54%), Gaps = 21/287 (7%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIF 65
H N+I + + T + + LV + +Y++LK +N ++ + YQI
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSND-----HICYFLYQIL 154
Query: 66 RGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS----YICSRF 121
RGL YIH+ V HRDLKP NLL++ T +KICDFG A+ + Y+ +R+
Sbjct: 155 RGLKYIHSA-NVLHRDLKPSNLLLNT-TXDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
YRAPE++ + YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 272
Query: 182 RCM----NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
C+ NY P PW+++F +A+DL ++L ++P R +A AH
Sbjct: 273 NCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAH 330
Query: 238 PFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKR 284
P+ ++ +P+ P F F EL E + +LI + R
Sbjct: 331 PYLEQYYDPSDEPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 373
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 162 bits (411), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 156/287 (54%), Gaps = 21/287 (7%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIF 65
H N+I + + T + + +V + + +Y++LK +N ++ + YQI
Sbjct: 88 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQIL 142
Query: 66 RGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS----YICSRF 121
RGL YIH+ V HRDLKP NLL++ T +KICDFG A+ + Y+ +R+
Sbjct: 143 RGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRW 200
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
YRAPE++ + YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++
Sbjct: 201 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 260
Query: 182 RCM----NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
C+ NY P PW+++F +A+DL ++L ++P R +A AH
Sbjct: 261 NCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAH 318
Query: 238 PFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKR 284
P+ ++ +P+ P F F EL E + +LI + R
Sbjct: 319 PYLEQYYDPSDEPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 361
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 162 bits (411), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 156/287 (54%), Gaps = 21/287 (7%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIF 65
H N+I + + T + + +V + + +Y++LK +N ++ + YQI
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQIL 134
Query: 66 RGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS----YICSRF 121
RGL YIH+ V HRDLKP NLL++ T +KICDFG A+ + Y+ +R+
Sbjct: 135 RGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
YRAPE++ + YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 252
Query: 182 RCM----NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
C+ NY P PW+++F +A+DL ++L ++P R +A AH
Sbjct: 253 NCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAH 310
Query: 238 PFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKR 284
P+ ++ +P+ P F F EL E + +LI + R
Sbjct: 311 PYLEQYYDPSDEPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 353
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 156/287 (54%), Gaps = 21/287 (7%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIF 65
H N+I + + T + + +V + + +Y++LK +N ++ + YQI
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQIL 132
Query: 66 RGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS----YICSRF 121
RGL YIH+ V HRDLKP NLL++ T +KICDFG A+ + Y+ +R+
Sbjct: 133 RGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
YRAPE++ + YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 250
Query: 182 RCM----NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
C+ NY P PW+++F +A+DL ++L ++P R +A AH
Sbjct: 251 NCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAH 308
Query: 238 PFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKR 284
P+ ++ +P+ P F F EL E + +LI + R
Sbjct: 309 PYLEQYYDPSDEPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 351
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 156/287 (54%), Gaps = 21/287 (7%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIF 65
H N+I + + T + + +V + + +Y++LK +N ++ + YQI
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQIL 138
Query: 66 RGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS----YICSRF 121
RGL YIH+ V HRDLKP NLL++ T +KICDFG A+ + Y+ +R+
Sbjct: 139 RGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
YRAPE++ + YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 256
Query: 182 RCM----NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
C+ NY P PW+++F +A+DL ++L ++P R +A AH
Sbjct: 257 NCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 238 PFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKR 284
P+ ++ +P+ P F F EL E + +LI + R
Sbjct: 315 PYLEQYYDPSDEPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 357
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 156/287 (54%), Gaps = 21/287 (7%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIF 65
H N+I + + T + + +V + + +Y++LK +N ++ + YQI
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQIL 154
Query: 66 RGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS----YICSRF 121
RGL YIH+ V HRDLKP NLL++ T +KICDFG A+ + Y+ +R+
Sbjct: 155 RGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
YRAPE++ + YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 272
Query: 182 RCM----NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
C+ NY P PW+++F +A+DL ++L ++P R +A AH
Sbjct: 273 NCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAH 330
Query: 238 PFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKR 284
P+ ++ +P+ P F F EL E + +LI + R
Sbjct: 331 PYLEQYYDPSDEPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 373
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 156/287 (54%), Gaps = 21/287 (7%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIF 65
H N+I + + T + + +V + + +Y++LK +N ++ + YQI
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQIL 139
Query: 66 RGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS----YICSRF 121
RGL YIH+ V HRDLKP NLL++ T +KICDFG A+ + Y+ +R+
Sbjct: 140 RGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRW 197
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
YRAPE++ + YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 257
Query: 182 RCM----NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
C+ NY P PW+++F +A+DL ++L ++P R +A AH
Sbjct: 258 NCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAH 315
Query: 238 PFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKR 284
P+ ++ +P+ P F F EL E + +LI + R
Sbjct: 316 PYLEQYYDPSDEPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 358
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 156/287 (54%), Gaps = 21/287 (7%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIF 65
H N+I + + T + + +V + + +Y++LK +N ++ + YQI
Sbjct: 86 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQIL 140
Query: 66 RGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS----YICSRF 121
RGL YIH+ V HRDLKP NLL++ T +KICDFG A+ + Y+ +R+
Sbjct: 141 RGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRW 198
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
YRAPE++ + YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++
Sbjct: 199 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 258
Query: 182 RCM----NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
C+ NY P PW+++F +A+DL ++L ++P R +A AH
Sbjct: 259 NCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAH 316
Query: 238 PFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKR 284
P+ ++ +P+ P F F EL E + +LI + R
Sbjct: 317 PYLEQYYDPSDEPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 359
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 156/287 (54%), Gaps = 21/287 (7%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIF 65
H N+I + + T + + +V + + +Y++LK +N ++ + YQI
Sbjct: 77 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQIL 131
Query: 66 RGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS----YICSRF 121
RGL YIH+ V HRDLKP NLL++ T +KICDFG A+ + Y+ +R+
Sbjct: 132 RGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRW 189
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
YRAPE++ + YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++
Sbjct: 190 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 249
Query: 182 RCM----NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
C+ NY P PW+++F +A+DL ++L ++P R +A AH
Sbjct: 250 NCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAH 307
Query: 238 PFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKR 284
P+ ++ +P+ P F F EL E + +LI + R
Sbjct: 308 PYLEQYYDPSDEPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 350
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 156/287 (54%), Gaps = 21/287 (7%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIF 65
H N+I + + T + + +V + + +Y++LK +N ++ + YQI
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQIL 138
Query: 66 RGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS----YICSRF 121
RGL YIH+ V HRDLKP NLL++ T +KICDFG A+ + Y+ +R+
Sbjct: 139 RGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
YRAPE++ + YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 256
Query: 182 RCM----NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
C+ NY P PW+++F +A+DL ++L ++P R +A AH
Sbjct: 257 NCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 238 PFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKR 284
P+ ++ +P+ P F F EL E + +LI + R
Sbjct: 315 PYLEQYYDPSDEPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 357
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/290 (33%), Positives = 157/290 (54%), Gaps = 27/290 (9%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIF 65
H N+I + + T + + +V + + +Y++LK Q + ++ + YQI
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQIL 136
Query: 66 RGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS----YICSRF 121
RGL YIH+ V HRDLKP NLL++ T +KICDFG A+ + Y+ +R+
Sbjct: 137 RGLKYIHSA-NVLHRDLKPSNLLLNT-TSDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
YRAPE++ + YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 254
Query: 182 RC-MNPNYTDF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHP 238
C +N ++ P PW+++F +A+DL ++L ++P R +A AHP
Sbjct: 255 NCGINLKARNYLLSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHP 313
Query: 239 ----FFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKR 284
++D EP A P F F EL E + +LI + R
Sbjct: 314 YLAQYYDPSDEPIAEAP--------FKFDMELDDLPKEKLKELIFEETAR 355
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 156/287 (54%), Gaps = 21/287 (7%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIF 65
H N+I + + T + + +V + + +Y++LK +N ++ + YQI
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQIL 134
Query: 66 RGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS----YICSRF 121
RGL YIH+ V HRDLKP NLL++ T +KICDFG A+ + Y+ +R+
Sbjct: 135 RGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
YRAPE++ + YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 252
Query: 182 RCM----NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
C+ NY P PW+++F +A+DL ++L ++P R +A AH
Sbjct: 253 NCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAH 310
Query: 238 PFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKR 284
P+ ++ +P+ P F F EL E + +LI + R
Sbjct: 311 PYLEQYYDPSDEPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 353
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 156/287 (54%), Gaps = 21/287 (7%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIF 65
H N+I + + T + + +V + + +Y++LK +N ++ + YQI
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQIL 136
Query: 66 RGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS----YICSRF 121
RGL YIH+ V HRDLKP NLL++ T +KICDFG A+ + Y+ +R+
Sbjct: 137 RGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
YRAPE++ + YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 254
Query: 182 RCM----NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
C+ NY P PW+++F +A+DL ++L ++P R +A AH
Sbjct: 255 NCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAH 312
Query: 238 PFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKR 284
P+ ++ +P+ P F F EL E + +LI + R
Sbjct: 313 PYLEQYYDPSDEPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 355
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 156/287 (54%), Gaps = 21/287 (7%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIF 65
H N+I + + T + + +V + + +Y++LK +N ++ + YQI
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSND-----HICYFLYQIL 138
Query: 66 RGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS----YICSRF 121
RGL YIH+ V HRDLKP NLL++ T +KICDFG A+ + Y+ +R+
Sbjct: 139 RGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
YRAPE++ + YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 256
Query: 182 RCM----NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
C+ NY P PW+++F +A+DL ++L ++P R +A AH
Sbjct: 257 NCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 238 PFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKR 284
P+ ++ +P+ P F F EL E + +LI + R
Sbjct: 315 PYLEQYYDPSDEPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 357
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/291 (34%), Positives = 156/291 (53%), Gaps = 29/291 (9%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIF 65
H N+I + + T + + +V + + +Y++LK +N ++ + YQI
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQIL 136
Query: 66 RGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS----YICSRF 121
RGL YIH+ V HRDLKP NLL++ T +KICDFG A+ + Y+ +R+
Sbjct: 137 RGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
YRAPE++ + YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 254
Query: 182 RCM----NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
C+ NY P PW+++F +A+DL ++L ++P R +A AH
Sbjct: 255 NCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAH 312
Query: 238 P----FFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKR 284
P ++D EP A P F F EL E + +LI + R
Sbjct: 313 PYLAQYYDPSDEPIAEAP--------FKFDMELDDLPKEKLKELIFEETAR 355
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 155/287 (54%), Gaps = 21/287 (7%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIF 65
H N+I + + T + + +V + + +Y++LK +N ++ + YQI
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQIL 132
Query: 66 RGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS----YICSRF 121
RGL YIH+ V HRDLKP NLL++ T +KICDFG A+ + Y+ +R+
Sbjct: 133 RGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
YRAPE++ + YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P +E++
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDL 250
Query: 182 RCM----NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
C+ NY P PW+++F +A+DL ++L ++P R +A AH
Sbjct: 251 NCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAH 308
Query: 238 PFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKR 284
P+ ++ +P+ P F F EL E + +LI + R
Sbjct: 309 PYLEQYYDPSDEPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 351
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 161 bits (407), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 156/287 (54%), Gaps = 21/287 (7%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIF 65
H N+I + + T + + +V + + +Y++LK +N ++ + YQI
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQIL 138
Query: 66 RGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISY----ICSRF 121
RGL YIH+ V HRDLKP NLL++ T +KICDFG A+ + + + +R+
Sbjct: 139 RGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLXEXVATRW 196
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
YRAPE++ + YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 256
Query: 182 RCM----NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
C+ NY P PW+++F +A+DL ++L ++P R +A AH
Sbjct: 257 NCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 238 PFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKR 284
P+ ++ +P+ P F F EL E + +LI + R
Sbjct: 315 PYLEQYYDPSDEPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 357
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 161 bits (407), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 156/287 (54%), Gaps = 21/287 (7%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIF 65
H N+I + + T + + +V + + +Y++LK +N ++ + YQI
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQIL 139
Query: 66 RGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISY----ICSRF 121
RGL YIH+ V HRDLKP NLL++ T +KICDFG A+ + + + +R+
Sbjct: 140 RGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLXEXVATRW 197
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
YRAPE++ + YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 257
Query: 182 RCM----NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
C+ NY P PW+++F +A+DL ++L ++P R +A AH
Sbjct: 258 NCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAH 315
Query: 238 PFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKR 284
P+ ++ +P+ P F F EL E + +LI + R
Sbjct: 316 PYLEQYYDPSDEPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 358
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 154/287 (53%), Gaps = 21/287 (7%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIF 65
H N+I + + T + + +V + + +Y++LK +N ++ + YQI
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQIL 134
Query: 66 RGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS----YICSRF 121
RGL YIH+ V HRDLKP NLL++ T +KICDFG A+ + Y+ +R+
Sbjct: 135 RGLKYIHSA-NVLHRDLKPSNLLLNT-TXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE- 180
YRAPE++ + YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E+
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 252
Query: 181 ---IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
I NY P PW+++F +A+DL ++L ++P R +A AH
Sbjct: 253 NXIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAH 310
Query: 238 PFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKR 284
P+ ++ +P+ P F F EL E + +LI + R
Sbjct: 311 PYLEQYYDPSDEPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 353
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 153/287 (53%), Gaps = 21/287 (7%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIF 65
H N+I + + T + + +V + + +Y++LK +N ++ + YQI
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQIL 134
Query: 66 RGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS----YICSRF 121
RGL YIH+ V HRDLKP NLL++ T +KI DFG A+ + Y+ +R+
Sbjct: 135 RGLKYIHSA-NVLHRDLKPSNLLLNT-TXDLKIXDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE- 180
YRAPE++ + YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E+
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 252
Query: 181 ---IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
I NY P PW+++F +A+DL ++L ++P R +A AH
Sbjct: 253 NXIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAH 310
Query: 238 PFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKR 284
P+ ++ +P+ P F F EL E + +LI + R
Sbjct: 311 PYLEQYYDPSDEPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 353
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 160/293 (54%), Gaps = 25/293 (8%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIF 65
H N+I++ + + +N + ++ E + ++RV+ + Q + +++ + YQ
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-----STQMLSDDHIQYFIYQTL 122
Query: 66 RGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS---------- 115
R + +H V HRDLKP NLL++ +K+CDFG A+ + A+ S
Sbjct: 123 RAVKVLHG-SNVIHRDLKPSNLLINS-NCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 116 -YICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG 174
Y+ +R+YRAPE++ + +Y+ ++D+WS GC+LAEL L +P+FPG + QL+ I ++G
Sbjct: 181 EYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIG 240
Query: 175 TP-TREEIRCM-NPNYTDF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 230
TP + ++RC+ +P ++ P A P K+F R+ P+ IDL R+L + P+ R T
Sbjct: 241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMF-PRVNPKGIDLLQRMLVFDPAKRIT 299
Query: 231 ALEACAHPFFDELREPNARLPNGRPLPP-LFNFKQELSGASPELVNKLIPDHV 282
A EA HP+ +PN P G P+PP F F + + + KLI + +
Sbjct: 300 AKEALEHPYLQTYHDPNDE-PEGEPIPPSFFEFDHYKEALTTKDLKKLIWNEI 351
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 160/293 (54%), Gaps = 25/293 (8%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIF 65
H N+I++ + + +N + ++ E + ++RV+ + Q + +++ + YQ
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-----STQMLSDDHIQYFIYQTL 122
Query: 66 RGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEAN-----------I 114
R + +H V HRDLKP NLL++ +K+CDFG A+ + A+ +
Sbjct: 123 RAVKVLHG-SNVIHRDLKPSNLLINS-NCDLKVCDFGLARIIDESAADNSEPTGQQSGMV 180
Query: 115 SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG 174
++ +R+YRAPE++ + +Y+ ++D+WS GC+LAEL L +P+FPG + QL+ I ++G
Sbjct: 181 EFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIG 240
Query: 175 TP-TREEIRCM-NPNYTDF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 230
TP + ++RC+ +P ++ P A P K+F R+ P+ IDL R+L + P+ R T
Sbjct: 241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMF-PRVNPKGIDLLQRMLVFDPAKRIT 299
Query: 231 ALEACAHPFFDELREPNARLPNGRPLPP-LFNFKQELSGASPELVNKLIPDHV 282
A EA HP+ +PN P G P+PP F F + + + KLI + +
Sbjct: 300 AKEALEHPYLQTYHDPNDE-PEGEPIPPSFFEFDHYKEALTTKDLKKLIWNEI 351
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/246 (35%), Positives = 138/246 (56%), Gaps = 14/246 (5%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ + HPN++SL S E L LV E++ + + +VL + Q +K+Y
Sbjct: 73 LKELHHPNIVSLIDVIHS-----ERCLTLVFEFMEKDLKKVLDENKTGLQDSQ---IKIY 124
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
YQ+ RG+A+ H R+ HRDLKPQNLL++ +K+ DFG A+ I + + +
Sbjct: 125 LYQLLRGVAHCHQ-HRILHRDLKPQNLLINS-DGALKLADFGLARAFGIPVRSYTHEVVT 182
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAP+++ G+ +Y+TS+DIWS GC+ AE++ G+PLFPG DQL +I +LGTP
Sbjct: 183 LWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPR 242
Query: 180 EIRCMN--PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
E + P + F + PW + E IDL S +L + P+ R +A +A H
Sbjct: 243 EWPQVQELPLWKQRTFQVFEKKPWSSII-PGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301
Query: 238 PFFDEL 243
P+F +L
Sbjct: 302 PYFKDL 307
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/246 (35%), Positives = 138/246 (56%), Gaps = 14/246 (5%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ + HPN++SL S E L LV E++ + + +VL + Q +K+Y
Sbjct: 73 LKELHHPNIVSLIDVIHS-----ERCLTLVFEFMEKDLKKVLDENKTGLQDSQ---IKIY 124
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
YQ+ RG+A+ H R+ HRDLKPQNLL++ +K+ DFG A+ I + + +
Sbjct: 125 LYQLLRGVAHCHQ-HRILHRDLKPQNLLINS-DGALKLADFGLARAFGIPVRSYTHEVVT 182
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAP+++ G+ +Y+TS+DIWS GC+ AE++ G+PLFPG DQL +I +LGTP
Sbjct: 183 LWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPR 242
Query: 180 EIRCMN--PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
E + P + F + PW + E IDL S +L + P+ R +A +A H
Sbjct: 243 EWPQVQELPLWKQRTFQVFEKKPWSSII-PGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301
Query: 238 PFFDEL 243
P+F +L
Sbjct: 302 PYFKDL 307
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 138/260 (53%), Gaps = 15/260 (5%)
Query: 1 MRVMDHPNVISLKHCFFSTTS-KNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F +S +N LVM ++ + +++ S + ++
Sbjct: 95 LKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEK------IQY 148
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ +GL YIH+ V HRDLKP NL V+ ++KI DFG A+ A Y+ +
Sbjct: 149 LVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNE-DCELKILDFGLARH--ADAEMTGYVVT 204
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I Y ++DIWS GC++AE+L G+ LF G++ +DQL +I+KV G P E
Sbjct: 205 RWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTE 264
Query: 180 EIRCMNPNYTDF---RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 236
++ +N PQ + ++F R P+A DL ++L+ R TA +A
Sbjct: 265 FVQKLNDKAAKSYIQSLPQTPRKDFTQLF-PRASPQAADLLEKMLELDVDKRLTAAQALT 323
Query: 237 HPFFDELREPNARLPNGRPL 256
HPFF+ R+P +P
Sbjct: 324 HPFFEPFRDPEEETEAQQPF 343
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 138/260 (53%), Gaps = 15/260 (5%)
Query: 1 MRVMDHPNVISLKHCFFSTTS-KNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F +S +N LVM ++ + +++ S + ++
Sbjct: 77 LKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEK------IQY 130
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ +GL YIH+ V HRDLKP NL V+ ++KI DFG A+ A Y+ +
Sbjct: 131 LVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNE-DCELKILDFGLARH--ADAEMTGYVVT 186
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I Y ++DIWS GC++AE+L G+ LF G++ +DQL +I+KV G P E
Sbjct: 187 RWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTE 246
Query: 180 EIRCMNPNYTDF---RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 236
++ +N PQ + ++F R P+A DL ++L+ R TA +A
Sbjct: 247 FVQKLNDKAAKSYIQSLPQTPRKDFTQLF-PRASPQAADLLEKMLELDVDKRLTAAQALT 305
Query: 237 HPFFDELREPNARLPNGRPL 256
HPFF+ R+P +P
Sbjct: 306 HPFFEPFRDPEEETEAQQPF 325
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 151 bits (381), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 159/293 (54%), Gaps = 25/293 (8%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIF 65
H N+I++ + + +N + ++ E + ++RV+ + Q + +++ + YQ
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-----STQMLSDDHIQYFIYQTL 122
Query: 66 RGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS---------- 115
R + +H V HRDLKP NLL++ +K+CDFG A+ + A+ S
Sbjct: 123 RAVKVLHG-SNVIHRDLKPSNLLINS-NCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 116 -YICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG 174
+ +R+YRAPE++ + +Y+ ++D+WS GC+LAEL L +P+FPG + QL+ I ++G
Sbjct: 181 EXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIG 240
Query: 175 TP-TREEIRCM-NPNYTDF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 230
TP + ++RC+ +P ++ P A P K+F R+ P+ IDL R+L + P+ R T
Sbjct: 241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMF-PRVNPKGIDLLQRMLVFDPAKRIT 299
Query: 231 ALEACAHPFFDELREPNARLPNGRPLPP-LFNFKQELSGASPELVNKLIPDHV 282
A EA HP+ +PN P G P+PP F F + + + KLI + +
Sbjct: 300 AKEALEHPYLQTYHDPNDE-PEGEPIPPSFFEFDHYKEALTTKDLKKLIWNEI 351
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 148 bits (374), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 141/269 (52%), Gaps = 17/269 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F TS E + LV + + ++K Q++ +V+
Sbjct: 104 LKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 158
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 159 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 214
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + ++QL +I+++ GTP
Sbjct: 215 RWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPAS 274
Query: 180 EIRCM----NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
I M NY + PQ+ + VF P A+DL ++L R TA EA
Sbjct: 275 VISRMPSHEARNYIN-SLPQMPKRNFADVF-IGANPLAVDLLEKMLVLDTDKRITASEAL 332
Query: 236 AHPFFDELREPNARLPNGRPLPPLFNFKQ 264
AHP+F + +P+ P P F +Q
Sbjct: 333 AHPYFSQYHDPDDE-PESEPYDQSFESRQ 360
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 148 bits (373), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/262 (34%), Positives = 152/262 (58%), Gaps = 22/262 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E++ + + + + +SA +PL +K Y
Sbjct: 60 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSY 112
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKPQNLL++ +K+ DFG A+ + + +
Sbjct: 113 LFQLLQGLAFCHS-HRVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYTHEVVT 170
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 229
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 230 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 284
Query: 234 ACAHPFFDELREPNARLPNGRP 255
A AHPFF ++ +P L RP
Sbjct: 285 ALAHPFFQDVTKPVPHLRLERP 306
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 148 bits (373), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 144/256 (56%), Gaps = 16/256 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ + H N+++L + S L LV EY+ + + + L + + VKL+
Sbjct: 54 LKDLKHANIVTLHDIIHTEKS-----LTLVFEYLDKDLKQYL---DDCGNIINMHNVKLF 105
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK-QLIAGEANISYICS 119
+Q+ RGLAY H +V HRDLKPQNLL++ ++K+ DFG A+ + I + + + +
Sbjct: 106 LFQLLRGLAYCHR-QKVLHRDLKPQNLLINE-RGELKLADFGLARAKSIPTKTYDNEVVT 163
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YR P+++ G+T+Y+T ID+W GC+ E+ G+PLFPG +QL I ++LGTPT E
Sbjct: 164 LWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEE 223
Query: 180 EIRCM--NPNYTDFRFPQIKAHPWHKVFHK-RMPPEAIDLASRLLQYSPSLRCTALEACA 236
+ N + + +P+ +A + H R+ + DL ++LLQ+ R +A +A
Sbjct: 224 TWPGILSNEEFKTYNYPKYRAEAL--LSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281
Query: 237 HPFFDELREPNARLPN 252
HPFF L E +LP+
Sbjct: 282 HPFFLSLGERIHKLPD 297
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 148 bits (373), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 149/253 (58%), Gaps = 22/253 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E+V + + + + +SA +PL +K Y
Sbjct: 59 LKELNHPNIVKLLDVIHT---ENKLYL--VFEHVDQDLKKFMD--ASALTGIPLPLIKSY 111
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKPQNLL++ +K+ DFG A+ + + +
Sbjct: 112 LFQLLQGLAFCHS-HRVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVT 169
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 228
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 229 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 283
Query: 234 ACAHPFFDELREP 246
A AHPFF ++ +P
Sbjct: 284 ALAHPFFQDVTKP 296
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 148 bits (373), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 138/258 (53%), Gaps = 13/258 (5%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ + H NVI L F TS + + LV + + ++K + +++ +V+
Sbjct: 81 LKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDE-----HVQF 135
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ RGL YIH+ + HRDLKP N+ V+ +++I DFG A+Q A E Y+ +
Sbjct: 136 LVYQLLRGLKYIHSAG-IIHRDLKPSNVAVNE-DSELRILDFGLARQ--ADEEMTGYVAT 191
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++V+GTP+ E
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPE 251
Query: 180 EIRCMNPNYTDFRFPQIKAHPWHKV--FHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
+ ++ + + P + + P AIDL R+L R +A EA AH
Sbjct: 252 VLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAH 311
Query: 238 PFFDELREPNARLPNGRP 255
+F + +P P P
Sbjct: 312 AYFSQYHDPEDE-PEAEP 328
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 147 bits (372), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 149/253 (58%), Gaps = 22/253 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E++ + + + + +SA +PL +K Y
Sbjct: 56 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSY 108
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKPQNLL++ +K+ DFG A+ + + +
Sbjct: 109 LFQLLQGLAFCHS-HRVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYTHEVVT 166
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 167 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 225
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 226 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 280
Query: 234 ACAHPFFDELREP 246
A AHPFF ++ +P
Sbjct: 281 ALAHPFFQDVTKP 293
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 147 bits (372), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 149/253 (58%), Gaps = 22/253 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E++ + + + + +SA +PL +K Y
Sbjct: 63 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSY 115
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKPQNLL++ +K+ DFG A+ + + +
Sbjct: 116 LFQLLQGLAFCHS-HRVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYTHEVVT 173
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 174 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 232
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 233 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 287
Query: 234 ACAHPFFDELREP 246
A AHPFF ++ +P
Sbjct: 288 ALAHPFFQDVTKP 300
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 147 bits (371), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 149/253 (58%), Gaps = 22/253 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E++ + + + + +SA +PL +K Y
Sbjct: 57 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSY 109
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKPQNLL++ +K+ DFG A+ + + +
Sbjct: 110 LFQLLQGLAFCHS-HRVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYTHEVVT 167
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 226
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 227 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 281
Query: 234 ACAHPFFDELREP 246
A AHPFF ++ +P
Sbjct: 282 ALAHPFFQDVTKP 294
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 147 bits (371), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 149/253 (58%), Gaps = 22/253 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E++ + + + + +SA +PL +K Y
Sbjct: 56 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSY 108
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKPQNLL++ +K+ DFG A+ + + +
Sbjct: 109 LFQLLQGLAFCHS-HRVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYTHEVVT 166
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 225
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 226 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 280
Query: 234 ACAHPFFDELREP 246
A AHPFF ++ +P
Sbjct: 281 ALAHPFFQDVTKP 293
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 147 bits (371), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 149/253 (58%), Gaps = 22/253 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E++ + + + + +SA +PL +K Y
Sbjct: 56 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSY 108
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKPQNLL++ +K+ DFG A+ + + +
Sbjct: 109 LFQLLQGLAFCHS-HRVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYTHEVVT 166
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 225
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 226 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 280
Query: 234 ACAHPFFDELREP 246
A AHPFF ++ +P
Sbjct: 281 ALAHPFFQDVTKP 293
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 147 bits (371), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 149/253 (58%), Gaps = 22/253 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E++ + + + + +SA +PL +K Y
Sbjct: 55 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSY 107
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKPQNLL++ +K+ DFG A+ + + +
Sbjct: 108 LFQLLQGLAFCHS-HRVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYTHEVVT 165
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 224
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 225 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 279
Query: 234 ACAHPFFDELREP 246
A AHPFF ++ +P
Sbjct: 280 ALAHPFFQDVTKP 292
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 147 bits (371), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 149/253 (58%), Gaps = 22/253 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E++ + + + + +SA +PL +K Y
Sbjct: 55 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSY 107
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKPQNLL++ +K+ DFG A+ + + +
Sbjct: 108 LFQLLQGLAFCHS-HRVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYTHEVVT 165
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 224
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 225 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 279
Query: 234 ACAHPFFDELREP 246
A AHPFF ++ +P
Sbjct: 280 ALAHPFFQDVTKP 292
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 147 bits (371), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 147/269 (54%), Gaps = 18/269 (6%)
Query: 6 HPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQI 64
H N+I++K T E + +V++ + +++++ ++Q + L +V+ + YQ+
Sbjct: 112 HDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIH----SSQPLTLEHVRYFLYQL 167
Query: 65 FRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEAN-----ISYICS 119
RGL Y+H+ +V HRDLKP NLLV+ ++KI DFG A+ L A Y+ +
Sbjct: 168 LRGLKYMHSA-QVIHRDLKPSNLLVNE-NCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 225
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPEL+ EYT +ID+WS GC+ E+L + LFPG+N V QL I+ VLGTP+
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPA 285
Query: 180 EIRCMNPNYTDF---RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 236
I+ + P + PW V+ +A+ L R+L++ PS R +A A
Sbjct: 286 VIQAVGAERVRAYIQSLPPRQPVPWETVY-PGADRQALSLLGRMLRFEPSARISAAAALR 344
Query: 237 HPFFDELREPNARLPNGRPLPPLFNFKQE 265
HPF + +P+ P+ P P F F +E
Sbjct: 345 HPFLAKYHDPDDE-PDCAP-PFDFAFDRE 371
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 147 bits (371), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 149/253 (58%), Gaps = 22/253 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E++ + + + + +SA +PL +K Y
Sbjct: 56 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSY 108
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKPQNLL++ +K+ DFG A+ + + +
Sbjct: 109 LFQLLQGLAFCHS-HRVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVT 166
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 225
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 226 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 280
Query: 234 ACAHPFFDELREP 246
A AHPFF ++ +P
Sbjct: 281 ALAHPFFQDVTKP 293
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 147 bits (370), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 149/253 (58%), Gaps = 22/253 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E++ + + + + +SA +PL +K Y
Sbjct: 56 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSY 108
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKPQNLL++ +K+ DFG A+ + + +
Sbjct: 109 LFQLLQGLAFCHS-HRVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYTHEVVT 166
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 225
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 226 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 280
Query: 234 ACAHPFFDELREP 246
A AHPFF ++ +P
Sbjct: 281 ALAHPFFQDVTKP 293
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 147 bits (370), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 149/253 (58%), Gaps = 22/253 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E++ + + + + +SA +PL +K Y
Sbjct: 55 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSY 107
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKPQNLL++ +K+ DFG A+ + + +
Sbjct: 108 LFQLLQGLAFCHS-HRVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYTHEVVT 165
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 224
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 225 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 279
Query: 234 ACAHPFFDELREP 246
A AHPFF ++ +P
Sbjct: 280 ALAHPFFQDVTKP 292
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 147 bits (370), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 149/253 (58%), Gaps = 22/253 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E++ + + + + +SA +PL +K Y
Sbjct: 63 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSY 115
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKPQNLL++ +K+ DFG A+ + + +
Sbjct: 116 LFQLLQGLAFCHS-HRVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYTHEVVT 173
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 174 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 232
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 233 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 287
Query: 234 ACAHPFFDELREP 246
A AHPFF ++ +P
Sbjct: 288 ALAHPFFQDVTKP 300
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 147 bits (370), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 149/253 (58%), Gaps = 22/253 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E++ + + + + +SA +PL +K Y
Sbjct: 59 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSY 111
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKPQNLL++ +K+ DFG A+ + + +
Sbjct: 112 LFQLLQGLAFCHS-HRVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVT 169
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 228
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 229 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 283
Query: 234 ACAHPFFDELREP 246
A AHPFF ++ +P
Sbjct: 284 ALAHPFFQDVTKP 296
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 147 bits (370), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 149/253 (58%), Gaps = 22/253 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E++ + + + + +SA +PL +K Y
Sbjct: 60 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSY 112
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKPQNLL++ +K+ DFG A+ + + +
Sbjct: 113 LFQLLQGLAFCHS-HRVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVT 170
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 229
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 230 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 284
Query: 234 ACAHPFFDELREP 246
A AHPFF ++ +P
Sbjct: 285 ALAHPFFQDVTKP 297
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 147 bits (370), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 149/253 (58%), Gaps = 22/253 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E++ + + + + +SA +PL +K Y
Sbjct: 57 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSY 109
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKPQNLL++ +K+ DFG A+ + + +
Sbjct: 110 LFQLLQGLAFCHS-HRVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVT 167
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 226
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 227 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 281
Query: 234 ACAHPFFDELREP 246
A AHPFF ++ +P
Sbjct: 282 ALAHPFFQDVTKP 294
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 147 bits (370), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 149/253 (58%), Gaps = 22/253 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E++ + + + + +SA +PL +K Y
Sbjct: 56 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSY 108
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKPQNLL++ +K+ DFG A+ + + +
Sbjct: 109 LFQLLQGLAFCHS-HRVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVT 166
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 225
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 226 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 280
Query: 234 ACAHPFFDELREP 246
A AHPFF ++ +P
Sbjct: 281 ALAHPFFQDVTKP 293
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 147 bits (370), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 149/253 (58%), Gaps = 22/253 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E++ + + + + +SA +PL +K Y
Sbjct: 55 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSY 107
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKPQNLL++ +K+ DFG A+ + + +
Sbjct: 108 LFQLLQGLAFCHS-HRVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVT 165
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 224
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 225 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 279
Query: 234 ACAHPFFDELREP 246
A AHPFF ++ +P
Sbjct: 280 ALAHPFFQDVTKP 292
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 147 bits (370), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 149/253 (58%), Gaps = 22/253 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E++ + + + + +SA +PL +K Y
Sbjct: 59 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSY 111
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKPQNLL++ +K+ DFG A+ + + +
Sbjct: 112 LFQLLQGLAFCHS-HRVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVT 169
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 228
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 229 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 283
Query: 234 ACAHPFFDELREP 246
A AHPFF ++ +P
Sbjct: 284 ALAHPFFQDVTKP 296
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 147 bits (370), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 149/253 (58%), Gaps = 22/253 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E++ + + + + +SA +PL +K Y
Sbjct: 58 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSY 110
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKPQNLL++ +K+ DFG A+ + + +
Sbjct: 111 LFQLLQGLAFCHS-HRVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVT 168
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 227
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 228 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 282
Query: 234 ACAHPFFDELREP 246
A AHPFF ++ +P
Sbjct: 283 ALAHPFFQDVTKP 295
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 147 bits (370), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 149/253 (58%), Gaps = 22/253 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E++ + + + + +SA +PL +K Y
Sbjct: 55 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSY 107
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKPQNLL++ +K+ DFG A+ + + +
Sbjct: 108 LFQLLQGLAFCHS-HRVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVT 165
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 224
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 225 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 279
Query: 234 ACAHPFFDELREP 246
A AHPFF ++ +P
Sbjct: 280 ALAHPFFQDVTKP 292
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 147 bits (370), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 149/253 (58%), Gaps = 22/253 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E++ + + + + +SA +PL +K Y
Sbjct: 56 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSY 108
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKPQNLL++ +K+ DFG A+ + + +
Sbjct: 109 LFQLLQGLAFCHS-HRVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVT 166
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 225
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 226 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 280
Query: 234 ACAHPFFDELREP 246
A AHPFF ++ +P
Sbjct: 281 ALAHPFFQDVTKP 293
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 147 bits (370), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 149/253 (58%), Gaps = 22/253 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E++ + + + + +SA +PL +K Y
Sbjct: 58 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSY 110
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKPQNLL++ +K+ DFG A+ + + +
Sbjct: 111 LFQLLQGLAFCHS-HRVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVT 168
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 227
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 228 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 282
Query: 234 ACAHPFFDELREP 246
A AHPFF ++ +P
Sbjct: 283 ALAHPFFQDVTKP 295
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 149/253 (58%), Gaps = 22/253 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E++ + + + + +SA +PL +K Y
Sbjct: 57 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSY 109
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKPQNLL++ +K+ DFG A+ + + +
Sbjct: 110 LFQLLQGLAFCHS-HRVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVT 167
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 226
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 227 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 281
Query: 234 ACAHPFFDELREP 246
A AHPFF ++ +P
Sbjct: 282 ALAHPFFQDVTKP 294
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 147/269 (54%), Gaps = 18/269 (6%)
Query: 6 HPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQI 64
H N+I++K T E + +V++ + +++++ ++Q + L +V+ + YQ+
Sbjct: 113 HDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIH----SSQPLTLEHVRYFLYQL 168
Query: 65 FRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEAN-----ISYICS 119
RGL Y+H+ +V HRDLKP NLLV+ ++KI DFG A+ L A Y+ +
Sbjct: 169 LRGLKYMHSA-QVIHRDLKPSNLLVNE-NCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPEL+ EYT +ID+WS GC+ E+L + LFPG+N V QL I+ VLGTP+
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPA 286
Query: 180 EIRCMNPNYTDF---RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 236
I+ + P + PW V+ +A+ L R+L++ PS R +A A
Sbjct: 287 VIQAVGAERVRAYIQSLPPRQPVPWETVY-PGADRQALSLLGRMLRFEPSARISAAAALR 345
Query: 237 HPFFDELREPNARLPNGRPLPPLFNFKQE 265
HPF + +P+ P+ P P F F +E
Sbjct: 346 HPFLAKYHDPDDE-PDCAP-PFDFAFDRE 372
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 138/258 (53%), Gaps = 13/258 (5%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ + H NVI L F TS + + LV + + ++K + +++ +V+
Sbjct: 81 LKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDE-----HVQF 135
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ RGL YIH+ + HRDLKP N+ V+ +++I DFG A+Q A E Y+ +
Sbjct: 136 LVYQLLRGLKYIHSAG-IIHRDLKPSNVAVNE-DSELRILDFGLARQ--ADEEMTGYVAT 191
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++V+GTP+ E
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPE 251
Query: 180 EIRCMNPNYTDFRFPQIKAHPWHKV--FHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
+ ++ + + P + + P AIDL R+L R +A EA AH
Sbjct: 252 VLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAH 311
Query: 238 PFFDELREPNARLPNGRP 255
+F + +P P P
Sbjct: 312 AYFSQYHDPEDE-PEAEP 328
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 148/253 (58%), Gaps = 22/253 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E+V + + + +SA +PL +K Y
Sbjct: 55 LKELNHPNIVKLLDVIHT---ENKLYL--VFEHVHQDLKTFMD--ASALTGIPLPLIKSY 107
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKPQNLL++ +K+ DFG A+ + + +
Sbjct: 108 LFQLLQGLAFCHS-HRVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYTHEVVT 165
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 224
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 225 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 279
Query: 234 ACAHPFFDELREP 246
A AHPFF ++ +P
Sbjct: 280 ALAHPFFQDVTKP 292
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 149/253 (58%), Gaps = 22/253 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E++ + + + + +SA +PL +K Y
Sbjct: 56 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSY 108
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GL++ H+ RV HRDLKPQNLL++ +K+ DFG A+ + + +
Sbjct: 109 LFQLLQGLSFCHS-HRVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYTHEVVT 166
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 225
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 226 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 280
Query: 234 ACAHPFFDELREP 246
A AHPFF ++ +P
Sbjct: 281 ALAHPFFQDVTKP 293
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 148/253 (58%), Gaps = 22/253 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E++ + + + +SA +PL +K Y
Sbjct: 59 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLHQDLKTFMD--ASALTGIPLPLIKSY 111
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKPQNLL++ +K+ DFG A+ + + +
Sbjct: 112 LFQLLQGLAFCHS-HRVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVT 169
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 228
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 229 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 283
Query: 234 ACAHPFFDELREP 246
A AHPFF ++ +P
Sbjct: 284 ALAHPFFQDVTKP 296
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 149/253 (58%), Gaps = 22/253 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E++ + + + + +SA +PL +K Y
Sbjct: 57 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSY 109
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKP+NLL++ +K+ DFG A+ + + +
Sbjct: 110 LFQLLQGLAFCHS-HRVLHRDLKPENLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVT 167
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 226
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 227 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 281
Query: 234 ACAHPFFDELREP 246
A AHPFF ++ +P
Sbjct: 282 ALAHPFFQDVTKP 294
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 149/253 (58%), Gaps = 22/253 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E++ + + + + +SA +PL +K Y
Sbjct: 58 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSY 110
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKP+NLL++ +K+ DFG A+ + + +
Sbjct: 111 LFQLLQGLAFCHS-HRVLHRDLKPENLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVT 168
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 227
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 228 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 282
Query: 234 ACAHPFFDELREP 246
A AHPFF ++ +P
Sbjct: 283 ALAHPFFQDVTKP 295
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 135/250 (54%), Gaps = 16/250 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F + ++ LVM ++ + +++KH R ++
Sbjct: 78 LKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDR-----IQF 132
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ +GL YIH + HRDLKP NL V+ ++KI DFG A+Q A + +
Sbjct: 133 LVYQMLKGLRYIHAAG-IIHRDLKPGNLAVNE-DCELKILDFGLARQ--ADSEMXGXVVT 188
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I YT ++DIWS GC++AE++ G+ LF G + +DQL EI+KV GTP E
Sbjct: 189 RWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAE 248
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ + NY P+++ + + P A++L ++L R TA EA
Sbjct: 249 FVQRLQSDEAKNYMK-GLPELEKKDFASIL-TNASPLAVNLLEKMLVLDAEQRVTAGEAL 306
Query: 236 AHPFFDELRE 245
AHP+F+ L +
Sbjct: 307 AHPYFESLHD 316
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 147/253 (58%), Gaps = 22/253 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E++ + + +SA +PL +K Y
Sbjct: 59 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLSMDLKDFMD--ASALTGIPLPLIKSY 111
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKPQNLL++ +K+ DFG A+ + + +
Sbjct: 112 LFQLLQGLAFCHS-HRVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVT 169
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 228
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 229 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 283
Query: 234 ACAHPFFDELREP 246
A AHPFF ++ +P
Sbjct: 284 ALAHPFFQDVTKP 296
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 148/253 (58%), Gaps = 22/253 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E++ + + + +SA +PL +K Y
Sbjct: 57 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLSMDLKKFMD--ASALTGIPLPLIKSY 109
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKP+NLL++ +K+ DFG A+ + + +
Sbjct: 110 LFQLLQGLAFCHS-HRVLHRDLKPENLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVT 167
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 226
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 227 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 281
Query: 234 ACAHPFFDELREP 246
A AHPFF ++ +P
Sbjct: 282 ALAHPFFQDVTKP 294
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 147/253 (58%), Gaps = 22/253 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E++ + + +SA +PL +K Y
Sbjct: 58 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLSMDLKDFMD--ASALTGIPLPLIKSY 110
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKPQNLL++ +K+ DFG A+ + + +
Sbjct: 111 LFQLLQGLAFCHS-HRVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVT 168
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 227
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 228 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 282
Query: 234 ACAHPFFDELREP 246
A AHPFF ++ +P
Sbjct: 283 ALAHPFFQDVTKP 295
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 138/258 (53%), Gaps = 13/258 (5%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ + H NVI L F TS + + LV + + ++K + +++ +V+
Sbjct: 73 LKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDE-----HVQF 127
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ RGL YIH+ + HRDLKP N+ V+ +++I DFG A+Q A E Y+ +
Sbjct: 128 LVYQLLRGLKYIHSAG-IIHRDLKPSNVAVNE-DCELRILDFGLARQ--ADEEMTGYVAT 183
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++V+GTP+ E
Sbjct: 184 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPE 243
Query: 180 EIRCMNPNYTDFRFPQIKAHPWHKV--FHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
+ ++ + + P + + P AIDL R+L R +A EA AH
Sbjct: 244 VLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAH 303
Query: 238 PFFDELREPNARLPNGRP 255
+F + +P P P
Sbjct: 304 AYFSQYHDPEDE-PEAEP 320
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 148/253 (58%), Gaps = 22/253 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E++ + + + +SA +PL +K Y
Sbjct: 59 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLSMDLKKFMD--ASALTGIPLPLIKSY 111
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKP+NLL++ +K+ DFG A+ + + +
Sbjct: 112 LFQLLQGLAFCHS-HRVLHRDLKPENLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVT 169
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 228
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 229 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 283
Query: 234 ACAHPFFDELREP 246
A AHPFF ++ +P
Sbjct: 284 ALAHPFFQDVTKP 296
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 144 bits (363), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 150/294 (51%), Gaps = 25/294 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ + HPN+I L F ++ ++LV +++ + ++K S + ++K Y
Sbjct: 66 LQELSHPNIIGLLDAFGHKSN-----ISLVFDFMETDLEVIIKDNSLV---LTPSHIKAY 117
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISY---I 117
+GL Y+H + HRDLKP NLL+D +K+ DFG AK G N +Y +
Sbjct: 118 MLMTLQGLEYLHQ-HWILHRDLKPNNLLLDE-NGVLKLADFGLAKSF--GSPNRAYXHQV 173
Query: 118 CSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 177
+R+YRAPEL+FGA Y +D+W+ GC+LAELLL P PG++ +DQL I + LGTPT
Sbjct: 174 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPT 233
Query: 178 REEI--RCMNPNYTDFR-FPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEA 234
E+ C P+Y F+ FP I P H +F + +DL L ++P R TA +A
Sbjct: 234 EEQWPDMCSLPDYVTFKSFPGI---PLHHIFSA-AGDDLLDLIQGLFLFNPCARITATQA 289
Query: 235 CAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQLGL 288
+F P RP P+ K++ ++P L K Q GL
Sbjct: 290 LKMKYFSNRPGPTPGCQLPRPNCPVETLKEQ---SNPALAIKRKRTEALEQGGL 340
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 144 bits (363), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 148/253 (58%), Gaps = 22/253 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E++ + + + +SA +PL +K Y
Sbjct: 56 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLHQDLKDFMD--ASALTGIPLPLIKSY 108
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKP+NLL++ +K+ DFG A+ + + +
Sbjct: 109 LFQLLQGLAFCHS-HRVLHRDLKPENLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVT 166
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 225
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 226 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 280
Query: 234 ACAHPFFDELREP 246
A AHPFF ++ +P
Sbjct: 281 ALAHPFFQDVTKP 293
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 144 bits (362), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 87/249 (34%), Positives = 146/249 (58%), Gaps = 22/249 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HPN++ L + +N+L+L V E++ + + + + +SA +PL +K Y
Sbjct: 56 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSY 108
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GLA+ H+ RV HRDLKPQNLL++ +K+ DFG A+ + + +
Sbjct: 109 LFQLLQGLAFCHS-HRVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVT 166
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 225
Query: 180 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 233
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 226 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 280
Query: 234 ACAHPFFDE 242
A AHPFF +
Sbjct: 281 ALAHPFFQD 289
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 143 bits (361), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 136/249 (54%), Gaps = 23/249 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ + H N++ L + L LV E++ + + ++L + + K +
Sbjct: 54 LKELKHSNIVKLYDVIHTKKR-----LVLVFEHLDQDLKKLLDVCEGG---LESVTAKSF 105
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
Q+ G+AY H RV HRDLKPQNLL++ ++KI DFG A+ I I +
Sbjct: 106 LLQLLNGIAYCHD-RRVLHRDLKPQNLLINR-EGELKIADFGLARAFGIPVRKYTHEIVT 163
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAP+++ G+ +Y+T+IDIWS GC+ AE++ G PLFPG + DQL+ I ++LGTP +
Sbjct: 164 LWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSK 223
Query: 180 ------EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 233
E+ +PN+T + + PW F K + IDL S++L+ P+ R TA +
Sbjct: 224 NWPNVTELPKYDPNFTVY-----EPLPWES-FLKGLDESGIDLLSKMLKLDPNQRITAKQ 277
Query: 234 ACAHPFFDE 242
A H +F E
Sbjct: 278 ALEHAYFKE 286
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 136/249 (54%), Gaps = 23/249 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ + H N++ L + L LV E++ + + ++L + + K +
Sbjct: 54 LKELKHSNIVKLYDVIHTKKR-----LVLVFEHLDQDLKKLLDVCEGG---LESVTAKSF 105
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
Q+ G+AY H RV HRDLKPQNLL++ ++KI DFG A+ I + +
Sbjct: 106 LLQLLNGIAYCHD-RRVLHRDLKPQNLLINR-EGELKIADFGLARAFGIPVRKYTHEVVT 163
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAP+++ G+ +Y+T+IDIWS GC+ AE++ G PLFPG + DQL+ I ++LGTP +
Sbjct: 164 LWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSK 223
Query: 180 ------EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 233
E+ +PN+T + + PW F K + IDL S++L+ P+ R TA +
Sbjct: 224 NWPNVTELPKYDPNFTVY-----EPLPWES-FLKGLDESGIDLLSKMLKLDPNQRITAKQ 277
Query: 234 ACAHPFFDE 242
A H +F E
Sbjct: 278 ALEHAYFKE 286
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 136/249 (54%), Gaps = 23/249 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ + H N++ L + L LV E++ + + ++L + + K +
Sbjct: 54 LKELKHSNIVKLYDVIHTKKR-----LVLVFEHLDQDLKKLLDVCEGG---LESVTAKSF 105
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
Q+ G+AY H RV HRDLKPQNLL++ ++KI DFG A+ I + +
Sbjct: 106 LLQLLNGIAYCHD-RRVLHRDLKPQNLLINR-EGELKIADFGLARAFGIPVRKYTHEVVT 163
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+YRAP+++ G+ +Y+T+IDIWS GC+ AE++ G PLFPG + DQL+ I ++LGTP +
Sbjct: 164 LWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSK 223
Query: 180 ------EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 233
E+ +PN+T + + PW F K + IDL S++L+ P+ R TA +
Sbjct: 224 NWPNVTELPKYDPNFTVY-----EPLPWES-FLKGLDESGIDLLSKMLKLDPNQRITAKQ 277
Query: 234 ACAHPFFDE 242
A H +F E
Sbjct: 278 ALEHAYFKE 286
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 136/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 129
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 130 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 185
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ A Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 186 RWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 246 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 304 AHAYFAQYHDPD 315
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----XQKLTDDHVQF 129
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 130 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DXELKILDFGLARH--TDDEMTGYVAT 185
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 246 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 304 AHAYFAQYHDPD 315
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 141 bits (355), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 131
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 132 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DSELKILDFGLARH--TDDEMTGYVAT 187
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 188 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 247
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 248 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 305
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 306 AHAYFAQYHDPD 317
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 141 bits (355), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 86 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 140
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 141 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DXELKILDFGLARH--TDDEMTGYVAT 196
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 197 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 256
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 257 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 314
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 315 AHAYFAQYHDPD 326
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 141 bits (355), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 135
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 136 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DSELKILDFGLARH--TDDEMTGYVAT 191
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 251
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 252 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 309
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 310 AHAYFAQYHDPD 321
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 134
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 135 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DXELKILDFGLARH--TDDEMTGYVAT 190
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 191 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 250
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 251 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 308
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 309 AHAYFAQYHDPD 320
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 140 bits (354), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 134
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 135 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DXELKILDFGLARH--TDDEMTGYVAT 190
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 191 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 250
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 251 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 308
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 309 AHAYFAQYHDPD 320
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 140 bits (354), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K +Q++ +V+
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----SQKLTDDHVQF 129
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG + + Y+ +
Sbjct: 130 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DSELKILDFGLCRH--TDDEMTGYVAT 185
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 246 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 304 AHAYFAQYHDPD 315
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 140 bits (354), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----XQKLTDDHVQF 129
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 130 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 185
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 246 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 304 AHAYFAQYHDPD 315
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 140 bits (353), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 136
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 137 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TADEMTGYVAT 192
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 252
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 253 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 311 AHAYFAQYHDPD 322
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 140 bits (353), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 136
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 137 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TADEMTGYVAT 192
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 252
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 253 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 311 AHAYFAQYHDPD 322
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 135
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 136 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVAT 191
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 251
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 252 LLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQAL 309
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 310 AHAYFAQYHDPD 321
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 135
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 136 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVAT 191
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 251
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 252 LLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQAL 309
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 310 AHAYFAQYHDPD 321
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 136
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 137 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TADEMTGYVAT 192
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 252
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 253 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 311 AHAYFAQYHDPD 322
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 131
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 132 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 187
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 188 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 247
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 248 LLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQAL 305
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 306 AHAYFAQYHDPD 317
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 141
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 142 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 197
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 198 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 257
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 258 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 315
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 316 AHAYFAQYHDPD 327
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 141
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 142 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 197
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 198 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 257
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 258 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 315
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 316 AHAYFAQYHDPD 327
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 85 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 139
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 140 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 195
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 196 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 255
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 256 LLKKISSESARNYIQ-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 313
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 314 AHAYFAQYHDPD 325
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 94 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 148
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 149 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 204
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 205 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 264
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 265 LLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQAL 322
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 323 AHAYFAQYHDPD 334
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 134
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 135 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 190
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 191 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 250
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 251 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 308
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 309 AHAYFAQYHDPD 320
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 149
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 150 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 205
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 206 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 265
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 266 LLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQAL 323
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 324 AHAYFAQYHDPD 335
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 141
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 142 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 197
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 198 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 257
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 258 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 315
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 316 AHAYFAQYHDPD 327
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 98 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 152
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 153 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMXGYVAT 208
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 209 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 268
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 269 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 326
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 327 AHAYFAQYHDPD 338
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 98 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 152
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 153 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 208
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 209 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 268
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 269 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 326
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 327 AHAYFAQYHDPD 338
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 129
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 130 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 185
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 246 LLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 304 AHAYFAQYHDPD 315
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 129
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 130 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 185
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 246 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 304 AHAYFAQYHDPD 315
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 86 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 140
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 141 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 196
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 197 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 256
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 257 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 314
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 315 AHAYFAQYHDPD 326
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 135
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 136 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 191
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 251
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 252 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 309
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 310 AHAYFAQYHDPD 321
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 129
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 130 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 185
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 246 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 304 AHAYFAQYHDPD 315
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 129
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 130 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 185
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 246 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 304 AHAYFAQYHDPD 315
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 126
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 127 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 182
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 183 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 242
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 243 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 300
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 301 AHAYFAQYHDPD 312
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 131
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 132 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 187
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 188 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 247
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 248 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 305
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 306 AHAYFAQYHDPD 317
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 129
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 130 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 185
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 246 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 304 AHAYFAQYHDPD 315
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 129
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 130 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 185
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 246 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 304 AHAYFAQYHDPD 315
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 136
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 137 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 192
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 252
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 253 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 311 AHAYFAQYHDPD 322
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 129
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 130 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 185
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 246 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 304 AHAYFAQYHDPD 315
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 73 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 127
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 128 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 183
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 184 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 243
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 244 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 301
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 302 AHAYFAQYHDPD 313
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 149
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 150 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 205
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 206 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 265
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 266 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 323
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 324 AHAYFAQYHDPD 335
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 94 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 148
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 149 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 204
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 205 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 264
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 265 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 322
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 323 AHAYFAQYHDPD 334
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 134
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 135 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 190
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 191 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 250
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 251 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 308
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 309 AHAYFAQYHDPD 320
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 74 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 128
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 129 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 184
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 185 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 244
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 245 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 302
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 303 AHAYFAQYHDPD 314
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 131
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 132 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 187
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 188 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 247
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 248 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 305
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 306 AHAYFAQYHDPD 317
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 125
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 126 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 181
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 241
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 242 LLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQAL 299
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 300 AHAYFAQYHDPD 311
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 125
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 126 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 181
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 241
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 242 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 299
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 300 AHAYFAQYHDPD 311
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 129
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 130 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 185
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 246 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 304 AHAYFAQYHDPD 315
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 126
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 127 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 182
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 183 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 242
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 243 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 300
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 301 AHAYFAQYHDPD 312
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 129
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI D+G A+ + Y+ +
Sbjct: 130 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDYGLARH--TDDEMTGYVAT 185
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 246 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 304 AHAYFAQYHDPD 315
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 129
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + ++ +
Sbjct: 130 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMAGFVAT 185
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 246 LLKKISSESARNYIQ-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 304 AHAYFAQYHDPD 315
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 137/254 (53%), Gaps = 23/254 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSAN--QRMPLIYVK 58
M+ + H N++ L + L LV E++ + + + + N + + L VK
Sbjct: 57 MKELKHENIVRLYDVIHTENK-----LTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVK 111
Query: 59 LYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYI 117
+ +Q+ +GLA+ H ++ HRDLKPQNLL++ Q+K+ DFG A+ I S +
Sbjct: 112 YFQWQLLQGLAFCHE-NKILHRDLKPQNLLINK-RGQLKLGDFGLARAFGIPVNTFSSEV 169
Query: 118 CSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 177
+ +YRAP+++ G+ Y+TSIDIWS GC+LAE++ G+PLFPG N +QL I ++GTP
Sbjct: 170 VTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPN 229
Query: 178 REEIRCMN--PNYTDFRFPQIKAHP---WHKVF--HKRMPPEA--IDLASRLLQYSPSLR 228
+ P Y P I+ P +V H + P + +D LLQ +P +R
Sbjct: 230 ESLWPSVTKLPKYN----PNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMR 285
Query: 229 CTALEACAHPFFDE 242
+A +A HP+F E
Sbjct: 286 LSAKQALHHPWFAE 299
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 125
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + ++ +
Sbjct: 126 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMAGFVAT 181
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 241
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 242 LLKKISSESARNYIQ-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 299
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 300 AHAYFAQYHDPD 311
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 129
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + ++ +
Sbjct: 130 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMAGFVAT 185
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 246 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 304 AHAYFAQYHDPD 315
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 132/243 (54%), Gaps = 13/243 (5%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ + H N+++L K + LV E+V ++ L+ + + + V+ Y
Sbjct: 78 LKQLRHENLVNL-----LEVCKKKKRWYLVFEFVDHTILDDLELFPNG---LDYQVVQKY 129
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA-GEANISYICS 119
+QI G+ + H+ + HRD+KP+N+LV + VK+CDFG A+ L A GE + +
Sbjct: 130 LFQIINGIGFCHS-HNIIHRDIKPENILVSQ-SGVVKLCDFGFARTLAAPGEVYDDEVAT 187
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT--PT 177
R+YRAPEL+ G +Y ++D+W+ GC++ E+ +G+PLFPG++ +DQL I+ LG P
Sbjct: 188 RWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPR 247
Query: 178 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
+E+ NP + R P+IK + + ++ IDLA + L P R E H
Sbjct: 248 HQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307
Query: 238 PFF 240
FF
Sbjct: 308 DFF 310
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 137 bits (345), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 133/252 (52%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K + +V+
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDD-----HVQF 125
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + Y+ +
Sbjct: 126 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGYVAT 181
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 241
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 242 LLKKISSESARNYIQ-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 299
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 300 AHAYFAQYHDPD 311
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 137 bits (344), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 134/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 129
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + + +
Sbjct: 130 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTGXVAT 185
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 246 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 304 AHAYFAQYHDPD 315
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 137 bits (344), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 134/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 129
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI FG A+ + Y+ +
Sbjct: 130 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILGFGLARH--TDDEMTGYVAT 185
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 246 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 304 AHAYFAQYHDPD 315
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 134/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 149
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DFG A+ + + +
Sbjct: 150 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMXGXVAT 205
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 206 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 265
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 266 LLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQAL 323
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 324 AHAYFAQYHDPD 335
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 134/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 129
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI D G A+ + Y+ +
Sbjct: 130 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDAGLARH--TDDEMTGYVAT 185
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 246 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 304 AHAYFAQYHDPD 315
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 134/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 129
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI D G A+ + Y+ +
Sbjct: 130 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDGGLARH--TDDEMTGYVAT 185
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 246 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 304 AHAYFAQYHDPD 315
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 134/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 129
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI D G A+ + Y+ +
Sbjct: 130 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDRGLARH--TDDEMTGYVAT 185
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 246 LLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 304 AHAYFAQYHDPD 315
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 134/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELF-LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ M H NVI L F S E + LV + + ++K Q++ +V+
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 129
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQI RGL YIH+ + HRDLKP NL V+ ++KI DF A+ + Y+ +
Sbjct: 130 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNE-DCELKILDFYLARH--TDDEMTGYVAT 185
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 180 EIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ ++ NY Q+ + VF P A+DL ++L R TA +A
Sbjct: 246 LLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 236 AHPFFDELREPN 247
AH +F + +P+
Sbjct: 304 AHAYFAQYHDPD 315
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 134/254 (52%), Gaps = 24/254 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ + H N++ L S L LV E+ + + K++ S N + VK +
Sbjct: 55 LKELKHKNIVRLHDVLHSDKK-----LTLVFEFCDQDLK---KYFDSCNGDLDPEIVKSF 106
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GL + H+ V HRDLKPQNLL++ ++K+ +FG A+ I + + +
Sbjct: 107 LFQLLKGLGFCHSR-NVLHRDLKPQNLLIN-RNGELKLANFGLARAFGIPVRCYSAEVVT 164
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIKVLGTPTR 178
+YR P+++FGA Y+TSID+WSAGC+ AEL G+PLFPG + DQL I ++LGTPT
Sbjct: 165 LWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTE 224
Query: 179 EEIRCMNPNYTDFRFPQIKAHPWHKVFHK------RMPPEAIDLASRLLQYSPSLRCTAL 232
E+ M + P K +P + ++ DL LL+ +P R +A
Sbjct: 225 EQWPSMT------KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAE 278
Query: 233 EACAHPFFDELREP 246
EA HP+F + P
Sbjct: 279 EALQHPYFSDFCPP 292
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 135 bits (339), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 133/254 (52%), Gaps = 24/254 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ + H N++ L S L LV E+ + + K++ S N + VK +
Sbjct: 55 LKELKHKNIVRLHDVLHSDKK-----LTLVFEFCDQDLK---KYFDSCNGDLDPEIVKSF 106
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+Q+ +GL + H+ V HRDLKPQNLL++ ++K+ DFG A+ I + + +
Sbjct: 107 LFQLLKGLGFCHSR-NVLHRDLKPQNLLIN-RNGELKLADFGLARAFGIPVRCYSAEVVT 164
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIKVLGTPTR 178
+YR P+++FGA Y+TSID+WSAGC+ AEL +PLFPG + DQL I ++LGTPT
Sbjct: 165 LWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTE 224
Query: 179 EEIRCMNPNYTDFRFPQIKAHPWHKVFHK------RMPPEAIDLASRLLQYSPSLRCTAL 232
E+ M + P K +P + ++ DL LL+ +P R +A
Sbjct: 225 EQWPSMT------KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAE 278
Query: 233 EACAHPFFDELREP 246
EA HP+F + P
Sbjct: 279 EALQHPYFSDFCPP 292
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 134 bits (337), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 142/282 (50%), Gaps = 50/282 (17%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIF 65
H N+++L + + N+ + LV +Y+ ++ V++ AN P ++ + YQ+
Sbjct: 68 HENIVNLLNVL---RADNDRDVYLVFDYMETDLHAVIR----ANILEP-VHKQYVVYQLI 119
Query: 66 RGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE---ANI-------- 114
+ + Y+H+ + HRD+KP N+L++ H VK+ DFG ++ + NI
Sbjct: 120 KVIKYLHS-GGLLHRDMKPSNILLNAECH-VKVADFGLSRSFVNIRRVTNNIPLSINENT 177
Query: 115 -----------SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV 163
Y+ +R+YRAPE++ G+T+YT ID+WS GC+L E+L G+P+FPG + +
Sbjct: 178 ENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM 237
Query: 164 DQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAH-------------PWHKVFHKRMP 210
+QL II V+ P+ E++ + + +K W + K P
Sbjct: 238 NQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINP 297
Query: 211 P-----EAIDLASRLLQYSPSLRCTALEACAHPFFDELREPN 247
EA+DL +LLQ++P+ R +A +A HPF PN
Sbjct: 298 KADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPN 339
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 135/263 (51%), Gaps = 13/263 (4%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
+ +HPNV+ L + + E L LV E+V + + L +P +K
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG--VPTETIKDM 125
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
+Q+ RGL ++H+ RV HRDLKPQN+LV + Q+K+ DFG A+ A S + +
Sbjct: 126 MFQLLRGLDFLHS-HRVVHRDLKPQNILVTS-SGQIKLADFGLARIYSFQMALTSVVVTL 183
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 180
+YRAPE++ ++ Y T +D+WS GC+ AE+ +PLF G + VDQL +I+ V+G P E+
Sbjct: 184 WYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED 242
Query: 181 I--RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHP 238
P F A P K F + DL + L ++P+ R +A A +HP
Sbjct: 243 WPRDVALPRQA---FHSKSAQPIEK-FVTDIDELGKDLLLKCLTFNPAKRISAYSALSHP 298
Query: 239 FFDELREPNARLPNGRPLPPLFN 261
+F +L L + LPP N
Sbjct: 299 YFQDLERCKENLDSH--LPPSQN 319
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 144/270 (53%), Gaps = 21/270 (7%)
Query: 6 HPNVISLKHCF--FSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLI--YVKLYT 61
HPN++ L+ F F + ++L+L V E + + +V+ +QR+ + +++ +
Sbjct: 88 HPNILGLRDIFVHFEEPAMHKLYL--VTELMRTDLAQVIH-----DQRIVISPQHIQYFM 140
Query: 62 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF 121
Y I GL +H V HRDL P N+L+ + + ICDF A++ A Y+ R+
Sbjct: 141 YHILLGLHVLHEAG-VVHRDLHPGNILLAD-NNDITICDFNLAREDTADANKTHYVTHRW 198
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
YRAPEL+ +T +D+WSAGCV+AE+ + LF G +QL +I++V+GTP E++
Sbjct: 199 YRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDV 258
Query: 182 RCM-NPNYTDF---RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
+P+ D+ + A W V P A+DL +++L+++P R + +A H
Sbjct: 259 VMFSSPSARDYLRNSLSNVPARAWTAVV-PTADPVALDLIAKMLEFNPQRRISTEQALRH 317
Query: 238 PFFDELREPNARLPNGRPLPPLFNFKQELS 267
P+F+ L +P L L F+F + ++
Sbjct: 318 PYFESLFDP---LDLTEGLSERFHFDESVT 344
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 144/270 (53%), Gaps = 21/270 (7%)
Query: 6 HPNVISLKHCF--FSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLI--YVKLYT 61
HPN++ L+ F F + ++L+L V E + + +V+ +QR+ + +++ +
Sbjct: 88 HPNILGLRDIFVHFEEPAMHKLYL--VTELMRTDLAQVIH-----DQRIVISPQHIQYFM 140
Query: 62 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF 121
Y I GL +H V HRDL P N+L+ + + ICDF A++ A Y+ R+
Sbjct: 141 YHILLGLHVLHEAG-VVHRDLHPGNILLAD-NNDITICDFNLAREDTADANKTHYVTHRW 198
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
YRAPEL+ +T +D+WSAGCV+AE+ + LF G +QL +I++V+GTP E++
Sbjct: 199 YRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDV 258
Query: 182 RCM-NPNYTDF---RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
+P+ D+ + A W V P A+DL +++L+++P R + +A H
Sbjct: 259 VMFSSPSARDYLRNSLSNVPARAWTAVV-PTADPVALDLIAKMLEFNPQRRISTEQALRH 317
Query: 238 PFFDELREPNARLPNGRPLPPLFNFKQELS 267
P+F+ L +P L L F+F + ++
Sbjct: 318 PYFESLFDP---LDLTEGLSERFHFDESVT 344
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 129/245 (52%), Gaps = 11/245 (4%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
+ +HPNV+ L + + E L LV E+V + + L +P +K
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG--VPTETIKDM 125
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
+Q+ RGL ++H+ RV HRDLKPQN+LV + Q+K+ DFG A+ A S + +
Sbjct: 126 MFQLLRGLDFLHS-HRVVHRDLKPQNILVTS-SGQIKLADFGLARIYSFQMALTSVVVTL 183
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 180
+YRAPE++ ++ Y T +D+WS GC+ AE+ +PLF G + VDQL +I+ V+G P E+
Sbjct: 184 WYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED 242
Query: 181 I--RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHP 238
P F A P K F + DL + L ++P+ R +A A +HP
Sbjct: 243 WPRDVALPRQA---FHSKSAQPIEK-FVTDIDELGKDLLLKCLTFNPAKRISAYSALSHP 298
Query: 239 FFDEL 243
+F +L
Sbjct: 299 YFQDL 303
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 141/262 (53%), Gaps = 25/262 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+V++H N+I L + F S E + +VME + ++ +V++ ++RM +
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ-MELDHERMSYL---- 131
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ G+ ++H+ + HRDLKP N++V +KI DFG A+ Y+ +
Sbjct: 132 -LYQMLVGIKHLHSAG-IIHRDLKPSNIVVKS-DATLKILDFGLARTAGTSFMMTPYVVT 188
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I G Y ++DIWS GC++ E++ G LFPG + +DQ ++I+ LGTP+ E
Sbjct: 189 RYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPE 247
Query: 180 EIRCMNP---NYTDFRFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSP 225
++ + P Y + R P+ + + K+F +K +A DL S++L
Sbjct: 248 FMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 226 SLRCTALEACAHPFFDELREPN 247
S R + EA HP+ + +P+
Sbjct: 307 SKRISVDEALQHPYINVWYDPS 328
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 127/242 (52%), Gaps = 11/242 (4%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
+ +HPNV+ L + + E L LV E+V + + L +P +K
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG--VPTETIKDM 125
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
+Q+ RGL ++H+ RV HRDLKPQN+LV + Q+K+ DFG A+ A S + +
Sbjct: 126 MFQLLRGLDFLHS-HRVVHRDLKPQNILVTS-SGQIKLADFGLARIYSFQMALTSVVVTL 183
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 180
+YRAPE++ ++ Y T +D+WS GC+ AE+ +PLF G + VDQL +I+ V+G P E+
Sbjct: 184 WYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED 242
Query: 181 I--RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHP 238
P F A P K F + DL + L ++P+ R +A A +HP
Sbjct: 243 WPRDVALPRQA---FHSKSAQPIEK-FVTDIDELGKDLLLKCLTFNPAKRISAYSALSHP 298
Query: 239 FF 240
+F
Sbjct: 299 YF 300
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 141/262 (53%), Gaps = 25/262 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+V++H N+I L + F S E + +VME + ++ +V++ ++RM +
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ-MELDHERMSYL---- 131
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ G+ ++H+ + HRDLKP N++V +KI DFG A+ Y+ +
Sbjct: 132 -LYQMLCGIKHLHSAG-IIHRDLKPSNIVVKS-DATLKILDFGLARTAGTSFMMTPYVVT 188
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I G Y ++DIWS GC++ E++ G LFPG + +DQ ++I+ LGTP+ E
Sbjct: 189 RYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPE 247
Query: 180 EIRCMNP---NYTDFRFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSP 225
++ + P Y + R P+ + + K+F +K +A DL S++L
Sbjct: 248 FMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 226 SLRCTALEACAHPFFDELREPN 247
S R + EA HP+ + +P+
Sbjct: 307 SKRISVDEALQHPYINVWYDPS 328
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 127 bits (319), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 140/262 (53%), Gaps = 25/262 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+V++H N+I L + F S E + +VME + ++ +V++ ++RM +
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ-MELDHERMSYL---- 131
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ G+ ++H+ + HRDLKP N++V +KI DFG A+ Y+ +
Sbjct: 132 -LYQMLVGIKHLHSAG-IIHRDLKPSNIVVKS-DATLKILDFGLARTAGTSFMMTPYVVT 188
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I G Y ++DIWS G ++ E++ G LFPG + +DQ ++I+ LGTP+ E
Sbjct: 189 RYYRAPEVILGMG-YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPE 247
Query: 180 EIRCMNP---NYTDFRFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSP 225
++ + P Y + R P+ + + K+F +K +A DL S++L
Sbjct: 248 FMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 226 SLRCTALEACAHPFFDELREPN 247
S R + EA HP+ + +P+
Sbjct: 307 SKRISVDEALQHPYINVWYDPS 328
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 140/262 (53%), Gaps = 25/262 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+V++H N+I L + F S E + +VME + ++ +V++ ++RM +
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ-MELDHERMSYL---- 131
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ G+ ++H+ + HRDLKP N++V +KI DFG A+ Y+ +
Sbjct: 132 -LYQMLVGIKHLHSAG-IIHRDLKPSNIVVKS-DATLKILDFGLARTAGTSFMMTPYVVT 188
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I G Y ++DIWS G ++ E++ G LFPG + +DQ ++I+ LGTP+ E
Sbjct: 189 RYYRAPEVILGMG-YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPE 247
Query: 180 EIRCMNP---NYTDFRFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSP 225
++ + P Y + R P+ + + K+F +K +A DL S++L
Sbjct: 248 FMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 226 SLRCTALEACAHPFFDELREPN 247
S R + EA HP+ + +P+
Sbjct: 307 SKRISVDEALQHPYINVWYDPS 328
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 134/257 (52%), Gaps = 31/257 (12%)
Query: 3 VMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTY 62
+M PN++ L SK +L+ EYV + ++VL Y + + ++ Y Y
Sbjct: 82 LMGGPNIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKVL--YPT----LTDYDIRYYIY 132
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFY 122
++ + L Y H+ + HRD+KP N+++D ++++ D+G A+ G+ + SR++
Sbjct: 133 ELLKALDYCHS-QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 123 RAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEI 181
+ PEL+ +Y S+D+WS GC+ A ++ +P F G + DQLV+I KVLGT
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG---- 247
Query: 182 RCMNPNYTDFRF---PQIKA-------HPWHKVFHKR----MPPEAIDLASRLLQYSPSL 227
+N +R PQ++A PW K + + PEAID +LL+Y
Sbjct: 248 --LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQE 305
Query: 228 RCTALEACAHPFFDELR 244
R TALEA HP+F ++R
Sbjct: 306 RLTALEAMTHPYFQQVR 322
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 140/262 (53%), Gaps = 25/262 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ ++H N+I L + F S E + +VME + ++ +V++ ++RM +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ-MELDHERMSYL---- 131
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ G+ ++H+ + HRDLKP N++V +KI DFG A+ Y+ +
Sbjct: 132 -LYQMLCGIKHLHSAG-IIHRDLKPSNIVVKS-DATLKILDFGLARTAGTSFMMTPYVVT 188
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I G Y ++DIWS GC++ E++ G LFPG + +DQ ++I+ LGTP+ E
Sbjct: 189 RYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPE 247
Query: 180 EIRCMNP---NYTDFRFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSP 225
++ + P Y + R P+ + + K+F +K +A DL S++L
Sbjct: 248 FMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 226 SLRCTALEACAHPFFDELREPN 247
S R + EA HP+ + +P+
Sbjct: 307 SKRISVDEALQHPYINVWYDPS 328
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 139/260 (53%), Gaps = 23/260 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ ++H N+ISL + F + E + LVME + ++ +V++ ++RM +
Sbjct: 77 MKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ-MELDHERMSYL---- 131
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ G+ ++H+ + HRDLKP N++V +KI DFG A+ Y+ +
Sbjct: 132 -LYQMLXGIKHLHSAG-IIHRDLKPSNIVVKS-DXTLKILDFGLARTAGTSFMMTPYVVT 188
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I G Y ++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E
Sbjct: 189 RYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 247
Query: 180 EIRCMNP---NYTDFR-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPS 226
++ + P NY + R FP++ P +K +A DL S++L P+
Sbjct: 248 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 307
Query: 227 LRCTALEACAHPFFDELREP 246
R + +A HP+ + +P
Sbjct: 308 KRISVDDALQHPYINVWYDP 327
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 132/253 (52%), Gaps = 31/253 (12%)
Query: 7 PNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFR 66
PN++ L SK +L+ EYV + ++VL Y + + ++ Y Y++ +
Sbjct: 107 PNIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKVL--YPT----LTDYDIRYYIYELLK 157
Query: 67 GLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPE 126
L Y H+ + HRD+KP N+++D ++++ D+G A+ G+ + SR+++ PE
Sbjct: 158 ALDYCHS-QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 216
Query: 127 LIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 185
L+ +Y S+D+WS GC+ A ++ +P F G + DQLV+I KVLGT +N
Sbjct: 217 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD------GLN 270
Query: 186 PNYTDFRF---PQIKA-------HPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTA 231
+R PQ++A PW K + + PEAID +LL+Y R TA
Sbjct: 271 AYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 330
Query: 232 LEACAHPFFDELR 244
LEA HP+F ++R
Sbjct: 331 LEAMTHPYFQQVR 343
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 139/260 (53%), Gaps = 23/260 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ ++H N+ISL + F + E + LVME + ++ +V++ ++RM +
Sbjct: 77 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ-MELDHERMSYL---- 131
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ G+ ++H+ + HRDLKP N++V +KI DFG A+ Y+ +
Sbjct: 132 -LYQMLXGIKHLHSAG-IIHRDLKPSNIVVKS-DXTLKILDFGLARTAGTSFMMTPYVVT 188
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I G Y ++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E
Sbjct: 189 RYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 247
Query: 180 EIRCMNP---NYTDFR-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPS 226
++ + P NY + R FP++ P +K +A DL S++L P+
Sbjct: 248 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 307
Query: 227 LRCTALEACAHPFFDELREP 246
R + +A HP+ + +P
Sbjct: 308 KRISVDDALQHPYINVWYDP 327
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 139/260 (53%), Gaps = 23/260 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ ++H N+ISL + F + E + LVME + ++ +V++ ++RM +
Sbjct: 70 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ-MELDHERMSYL---- 124
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ G+ ++H+ + HRDLKP N++V +KI DFG A+ Y+ +
Sbjct: 125 -LYQMLXGIKHLHSAG-IIHRDLKPSNIVVKS-DXTLKILDFGLARTAGTSFMMTPYVVT 181
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I G Y ++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E
Sbjct: 182 RYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 240
Query: 180 EIRCMNP---NYTDFR-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPS 226
++ + P NY + R FP++ P +K +A DL S++L P+
Sbjct: 241 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 300
Query: 227 LRCTALEACAHPFFDELREP 246
R + +A HP+ + +P
Sbjct: 301 KRISVDDALQHPYINVWYDP 320
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 140/262 (53%), Gaps = 25/262 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ ++H N+I L + F S E + +VME + ++ +V++ ++RM +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ-MELDHERMSYL---- 131
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ G+ ++H+ + HRDLKP N++V +KI DFG A+ Y+ +
Sbjct: 132 -LYQMLCGIKHLHSAG-IIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVT 188
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I G Y ++DIWS GC++ E++ G LFPG + +DQ ++I+ LGTP+ E
Sbjct: 189 RYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPE 247
Query: 180 EIRCMNP---NYTDFRFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSP 225
++ + P Y + R P+ + + K+F +K +A DL S++L
Sbjct: 248 FMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 226 SLRCTALEACAHPFFDELREPN 247
S R + EA HP+ + +P+
Sbjct: 307 SKRISVDEALQHPYINVWYDPS 328
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 130/256 (50%), Gaps = 25/256 (9%)
Query: 7 PNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFR 66
PN+I+L S+ LV E+V + ++ L+ Q + ++ Y Y+I +
Sbjct: 92 PNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLR------QTLTDYDIRFYMYEILK 142
Query: 67 GLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPE 126
L Y H++ + HRD+KP N+++D ++++ D+G A+ G+ + SR+++ PE
Sbjct: 143 ALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 201
Query: 127 LIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 185
L+ Y S+D+WS GC+LA ++ +P F G + DQLV I KVLGT E++
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYI 258
Query: 186 PNYT---DFRFPQI----KAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEA 234
Y D RF I W + H + PEA+D +LL+Y R TA EA
Sbjct: 259 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 318
Query: 235 CAHPFFDELREPNARL 250
HP+F + + AR+
Sbjct: 319 MEHPYFYTVVKDQARM 334
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 132/253 (52%), Gaps = 31/253 (12%)
Query: 7 PNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFR 66
PN++ L SK +L+ EYV + ++VL Y + + ++ Y Y++ +
Sbjct: 86 PNIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKVL--YPT----LTDYDIRYYIYELLK 136
Query: 67 GLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPE 126
L Y H+ + HRD+KP N+++D ++++ D+G A+ G+ + SR+++ PE
Sbjct: 137 ALDYCHS-QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 195
Query: 127 LIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 185
L+ +Y S+D+WS GC+ A ++ +P F G + DQLV+I KVLGT +N
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LN 249
Query: 186 PNYTDFRF---PQIKA-------HPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTA 231
+R PQ++A PW K + + PEAID +LL+Y R TA
Sbjct: 250 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 309
Query: 232 LEACAHPFFDELR 244
LEA HP+F ++R
Sbjct: 310 LEAMTHPYFQQVR 322
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 132/253 (52%), Gaps = 31/253 (12%)
Query: 7 PNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFR 66
PN++ L SK +L+ EYV + ++VL Y + + ++ Y Y++ +
Sbjct: 86 PNIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKVL--YPT----LTDYDIRYYIYELLK 136
Query: 67 GLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPE 126
L Y H+ + HRD+KP N+++D ++++ D+G A+ G+ + SR+++ PE
Sbjct: 137 ALDYCHS-QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 195
Query: 127 LIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 185
L+ +Y S+D+WS GC+ A ++ +P F G + DQLV+I KVLGT +N
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LN 249
Query: 186 PNYTDFRF---PQIKA-------HPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTA 231
+R PQ++A PW K + + PEAID +LL+Y R TA
Sbjct: 250 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 309
Query: 232 LEACAHPFFDELR 244
LEA HP+F ++R
Sbjct: 310 LEAMTHPYFQQVR 322
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 132/253 (52%), Gaps = 31/253 (12%)
Query: 7 PNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFR 66
PN++ L SK +L+ EYV + ++VL Y + + ++ Y Y++ +
Sbjct: 86 PNIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKVL--YPT----LTDYDIRYYIYELLK 136
Query: 67 GLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPE 126
L Y H+ + HRD+KP N+++D ++++ D+G A+ G+ + SR+++ PE
Sbjct: 137 ALDYCHS-QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 195
Query: 127 LIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 185
L+ +Y S+D+WS GC+ A ++ +P F G + DQLV+I KVLGT +N
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD------GLN 249
Query: 186 PNYTDFRF---PQIKA-------HPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTA 231
+R PQ++A PW K + + PEAID +LL+Y R TA
Sbjct: 250 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 309
Query: 232 LEACAHPFFDELR 244
LEA HP+F ++R
Sbjct: 310 LEAMTHPYFQQVR 322
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 132/253 (52%), Gaps = 31/253 (12%)
Query: 7 PNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFR 66
PN++ L SK +L+ EYV + ++VL Y + + ++ Y Y++ +
Sbjct: 87 PNIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKVL--YPT----LTDYDIRYYIYELLK 137
Query: 67 GLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPE 126
L Y H+ + HRD+KP N+++D ++++ D+G A+ G+ + SR+++ PE
Sbjct: 138 ALDYCHS-QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 196
Query: 127 LIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 185
L+ +Y S+D+WS GC+ A ++ +P F G + DQLV+I KVLGT +N
Sbjct: 197 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD------GLN 250
Query: 186 PNYTDFRF---PQIKA-------HPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTA 231
+R PQ++A PW K + + PEAID +LL+Y R TA
Sbjct: 251 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 310
Query: 232 LEACAHPFFDELR 244
LEA HP+F ++R
Sbjct: 311 LEAMTHPYFQQVR 323
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 132/253 (52%), Gaps = 31/253 (12%)
Query: 7 PNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFR 66
PN++ L SK +L+ EYV + ++VL Y + + ++ Y Y++ +
Sbjct: 88 PNIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKVL--YPT----LTDYDIRYYIYELLK 138
Query: 67 GLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPE 126
L Y H+ + HRD+KP N+++D ++++ D+G A+ G+ + SR+++ PE
Sbjct: 139 ALDYCHS-QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 197
Query: 127 LIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 185
L+ +Y S+D+WS GC+ A ++ +P F G + DQLV+I KVLGT +N
Sbjct: 198 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LN 251
Query: 186 PNYTDFRF---PQIKA-------HPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTA 231
+R PQ++A PW K + + PEAID +LL+Y R TA
Sbjct: 252 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 311
Query: 232 LEACAHPFFDELR 244
LEA HP+F ++R
Sbjct: 312 LEAMTHPYFQQVR 324
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 132/253 (52%), Gaps = 31/253 (12%)
Query: 7 PNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFR 66
PN++ L SK +L+ EYV + ++VL Y + + ++ Y Y++ +
Sbjct: 86 PNIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKVL--YPT----LTDYDIRYYIYELLK 136
Query: 67 GLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPE 126
L Y H+ + HRD+KP N+++D ++++ D+G A+ G+ + SR+++ PE
Sbjct: 137 ALDYCHS-QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 195
Query: 127 LIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 185
L+ +Y S+D+WS GC+ A ++ +P F G + DQLV+I KVLGT +N
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LN 249
Query: 186 PNYTDFRF---PQIKA-------HPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTA 231
+R PQ++A PW K + + PEAID +LL+Y R TA
Sbjct: 250 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 309
Query: 232 LEACAHPFFDELR 244
LEA HP+F ++R
Sbjct: 310 LEAMTHPYFQQVR 322
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 132/253 (52%), Gaps = 31/253 (12%)
Query: 7 PNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFR 66
PN++ L SK +L+ EYV + ++VL Y + + ++ Y Y++ +
Sbjct: 87 PNIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKVL--YPT----LTDYDIRYYIYELLK 137
Query: 67 GLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPE 126
L Y H+ + HRD+KP N+++D ++++ D+G A+ G+ + SR+++ PE
Sbjct: 138 ALDYCHS-QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 196
Query: 127 LIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 185
L+ +Y S+D+WS GC+ A ++ +P F G + DQLV+I KVLGT +N
Sbjct: 197 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LN 250
Query: 186 PNYTDFRF---PQIKA-------HPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTA 231
+R PQ++A PW K + + PEAID +LL+Y R TA
Sbjct: 251 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 310
Query: 232 LEACAHPFFDELR 244
LEA HP+F ++R
Sbjct: 311 LEAMTHPYFQQVR 323
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 131/253 (51%), Gaps = 31/253 (12%)
Query: 7 PNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFR 66
PN++ L SK +L+ EYV + ++VL Y + ++ Y Y++ +
Sbjct: 86 PNIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKVL--YPTLTDYD----IRYYIYELLK 136
Query: 67 GLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPE 126
L Y H+ + HRD+KP N+++D ++++ D+G A+ G+ + SR+++ PE
Sbjct: 137 ALDYCHS-QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 195
Query: 127 LIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 185
L+ +Y S+D+WS GC+ A ++ +P F G + DQLV+I KVLGT +N
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LN 249
Query: 186 PNYTDFRF---PQIKA-------HPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTA 231
+R PQ++A PW K + + PEAID +LL+Y R TA
Sbjct: 250 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 309
Query: 232 LEACAHPFFDELR 244
LEA HP+F ++R
Sbjct: 310 LEAMTHPYFQQVR 322
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 139/260 (53%), Gaps = 23/260 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ ++H N+ISL + F + E + LVME + ++ +V++ ++RM +
Sbjct: 77 MKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ-MELDHERMSYL---- 131
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ G+ ++H+ + HRDLKP N++V +KI DFG A+ Y+ +
Sbjct: 132 -LYQMLCGIKHLHSAG-IIHRDLKPSNIVVKS-DXTLKILDFGLARTAGTSFMMTPYVVT 188
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I G Y ++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E
Sbjct: 189 RYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 247
Query: 180 EIRCMNP---NYTDFR-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPS 226
++ + P NY + R FP++ P +K +A DL S++L P+
Sbjct: 248 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 307
Query: 227 LRCTALEACAHPFFDELREP 246
R + +A HP+ + +P
Sbjct: 308 KRISVDDALQHPYINVWYDP 327
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 124 bits (312), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 140/262 (53%), Gaps = 25/262 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ ++H N+I L + F S E + +VME + ++ +V++ ++RM +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHERMSYL---- 131
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ G+ ++H+ + HRDLKP N++V +KI DFG A+ Y+ +
Sbjct: 132 -LYQMLCGIKHLHSAG-IIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVT 188
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I G Y ++DIWS GC++ E++ G LFPG + +DQ ++I+ LGTP+ E
Sbjct: 189 RYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPE 247
Query: 180 EIRCMNP---NYTDFRFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSP 225
++ + P Y + R P+ + + K+F +K +A DL S++L
Sbjct: 248 FMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 226 SLRCTALEACAHPFFDELREPN 247
S R + EA HP+ + +P+
Sbjct: 307 SKRISVDEALQHPYINVWYDPS 328
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 129/256 (50%), Gaps = 25/256 (9%)
Query: 7 PNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFR 66
PN+I+L S+ LV E+V + ++ L Q + ++ Y Y+I +
Sbjct: 92 PNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILK 142
Query: 67 GLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPE 126
L Y H++ + HRD+KP N+L+D ++++ D+G A+ G+ + SR+++ PE
Sbjct: 143 ALDYCHSMG-IMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 201
Query: 127 LIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 185
L+ Y S+D+WS GC+LA ++ +P F G + DQLV I KVLGT E++
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYI 258
Query: 186 PNYT---DFRFPQI----KAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEA 234
Y D RF I W + H + PEA+D +LL+Y R TA EA
Sbjct: 259 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 318
Query: 235 CAHPFFDELREPNARL 250
HP+F + + AR+
Sbjct: 319 MEHPYFYTVVKDQARM 334
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 140/265 (52%), Gaps = 42/265 (15%)
Query: 1 MRVMDHPNVI-----------SLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSAN 49
+R +DH N++ L S T N +++ V EY+ + VL
Sbjct: 62 IRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYI--VQEYMETDLANVL------- 112
Query: 50 QRMPLI--YVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 107
++ PL+ + +L+ YQ+ RGL YIH+ V HRDLKP NL ++ +KI DFG A+ +
Sbjct: 113 EQGPLLEEHARLFMYQLLRGLKYIHSA-NVLHRDLKPANLFINTEDLVLKIGDFGLARIM 171
Query: 108 ---IAGEANISY-ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV 163
+ + ++S + +++YR+P L+ YT +ID+W+AGC+ AE+L G+ LF G + +
Sbjct: 172 DPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL 231
Query: 164 DQL---VEIIKVLGTPTREEIRCMNPNY--TDFRFPQIKAHPWHKVFHKRMPP---EAID 215
+Q+ +E I V+ R+E+ + P Y D P HK + +P EA+D
Sbjct: 232 EQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEP-------HKPLTQLLPGISREAVD 284
Query: 216 LASRLLQYSPSLRCTALEACAHPFF 240
++L +SP R TA EA +HP+
Sbjct: 285 FLEQILTFSPMDRLTAEEALSHPYM 309
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 133/249 (53%), Gaps = 15/249 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ + HPN+++L F + + L+LV EY ++ L Y +P VK
Sbjct: 56 LKQLKHPNLVNLLEVF-----RRKRRLHLVFEYCDHTVLHELDRYQRG---VPEHLVKSI 107
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANI--SYIC 118
T+Q + + + H HRD+KP+N+L+ + +K+CDFG A+ L+ G ++ +
Sbjct: 108 TWQTLQAVNFCHK-HNCIHRDVKPENILITKHS-VIKLCDFGFAR-LLTGPSDYYDDEVA 164
Query: 119 SRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT--P 176
+R+YR+PEL+ G T+Y +D+W+ GCV AELL G PL+PG++ VDQL I K LG P
Sbjct: 165 TRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIP 224
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 236
+++ N ++ + P + ++ + A+ L L P+ R T +
Sbjct: 225 RHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284
Query: 237 HPFFDELRE 245
HP+F+ +RE
Sbjct: 285 HPYFENIRE 293
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 127/247 (51%), Gaps = 18/247 (7%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ + H N+I LK L+L+ EY LK Y N + + +K +
Sbjct: 87 LKELQHRNIIELKSVIHHNHR-----LHLIFEYAEND----LKKYMDKNPDVSMRVIKSF 137
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVD----PLTHQVKICDFGSAKQL-IAGEANIS 115
YQ+ G+ + H+ R HRDLKPQNLL+ T +KI DFG A+ I
Sbjct: 138 LYQLINGVNFCHS-RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTH 196
Query: 116 YICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 175
I + +YR PE++ G+ Y+TS+DIWS C+ AE+L+ PLFPG++ +DQL +I +VLG
Sbjct: 197 EIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGL 256
Query: 176 PTREEIRCMN--PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 233
P + P++ FP+ + +V + E +DL + +L+ P R +A
Sbjct: 257 PDDTTWPGVTALPDWKQ-SFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKN 315
Query: 234 ACAHPFF 240
A HP+F
Sbjct: 316 ALEHPYF 322
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 124 bits (310), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 129/256 (50%), Gaps = 25/256 (9%)
Query: 7 PNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFR 66
PN+I+L S+ LV E+V + ++ L Q + ++ Y Y+I +
Sbjct: 92 PNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILK 142
Query: 67 GLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPE 126
L Y H++ + HRD+KP N+++D ++++ D+G A+ G+ + SR+++ PE
Sbjct: 143 ALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 201
Query: 127 LIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 185
L+ Y S+D+WS GC+LA ++ +P F G + DQLV I KVLGT E++
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYI 258
Query: 186 PNYT---DFRFPQI----KAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEA 234
Y D RF I W + H + PEA+D +LL+Y R TA EA
Sbjct: 259 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 318
Query: 235 CAHPFFDELREPNARL 250
HP+F + + AR+
Sbjct: 319 MEHPYFYTVVKDQARM 334
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 124 bits (310), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 129/256 (50%), Gaps = 25/256 (9%)
Query: 7 PNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFR 66
PN+I+L S+ LV E+V + ++ L Q + ++ Y Y+I +
Sbjct: 91 PNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILK 141
Query: 67 GLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPE 126
L Y H++ + HRD+KP N+++D ++++ D+G A+ G+ + SR+++ PE
Sbjct: 142 ALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 200
Query: 127 LIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 185
L+ Y S+D+WS GC+LA ++ +P F G + DQLV I KVLGT E++
Sbjct: 201 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYI 257
Query: 186 PNYT---DFRFPQI----KAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEA 234
Y D RF I W + H + PEA+D +LL+Y R TA EA
Sbjct: 258 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 317
Query: 235 CAHPFFDELREPNARL 250
HP+F + + AR+
Sbjct: 318 MEHPYFYTVVKDQARM 333
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 124 bits (310), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 129/256 (50%), Gaps = 25/256 (9%)
Query: 7 PNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFR 66
PN+I+L S+ LV E+V + ++ L Q + ++ Y Y+I +
Sbjct: 92 PNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILK 142
Query: 67 GLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPE 126
L Y H++ + HRD+KP N+++D ++++ D+G A+ G+ + SR+++ PE
Sbjct: 143 ALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 201
Query: 127 LIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 185
L+ Y S+D+WS GC+LA ++ +P F G + DQLV I KVLGT E++
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYI 258
Query: 186 PNYT---DFRFPQI----KAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEA 234
Y D RF I W + H + PEA+D +LL+Y R TA EA
Sbjct: 259 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 318
Query: 235 CAHPFFDELREPNARL 250
HP+F + + AR+
Sbjct: 319 MEHPYFYTVVKDQARM 334
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 124 bits (310), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 129/256 (50%), Gaps = 25/256 (9%)
Query: 7 PNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFR 66
PN+I+L S+ LV E+V + ++ L Q + ++ Y Y+I +
Sbjct: 97 PNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILK 147
Query: 67 GLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPE 126
L Y H++ + HRD+KP N+++D ++++ D+G A+ G+ + SR+++ PE
Sbjct: 148 ALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 206
Query: 127 LIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 185
L+ Y S+D+WS GC+LA ++ +P F G + DQLV I KVLGT E++
Sbjct: 207 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYI 263
Query: 186 PNYT---DFRFPQI----KAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEA 234
Y D RF I W + H + PEA+D +LL+Y R TA EA
Sbjct: 264 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 323
Query: 235 CAHPFFDELREPNARL 250
HP+F + + AR+
Sbjct: 324 MEHPYFYTVVKDQARM 339
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 124 bits (310), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 129/256 (50%), Gaps = 25/256 (9%)
Query: 7 PNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFR 66
PN+I+L S+ LV E+V + ++ L Q + ++ Y Y+I +
Sbjct: 92 PNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILK 142
Query: 67 GLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPE 126
L Y H++ + HRD+KP N+++D ++++ D+G A+ G+ + SR+++ PE
Sbjct: 143 ALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 201
Query: 127 LIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 185
L+ Y S+D+WS GC+LA ++ +P F G + DQLV I KVLGT E++
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYI 258
Query: 186 PNYT---DFRFPQI----KAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEA 234
Y D RF I W + H + PEA+D +LL+Y R TA EA
Sbjct: 259 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 318
Query: 235 CAHPFFDELREPNARL 250
HP+F + + AR+
Sbjct: 319 MEHPYFYTVVKDQARM 334
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 124 bits (310), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 129/256 (50%), Gaps = 25/256 (9%)
Query: 7 PNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFR 66
PN+I+L S+ LV E+V + ++ L Q + ++ Y Y+I +
Sbjct: 92 PNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILK 142
Query: 67 GLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPE 126
L Y H++ + HRD+KP N+++D ++++ D+G A+ G+ + SR+++ PE
Sbjct: 143 ALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 201
Query: 127 LIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 185
L+ Y S+D+WS GC+LA ++ +P F G + DQLV I KVLGT E++
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYI 258
Query: 186 PNYT---DFRFPQI----KAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEA 234
Y D RF I W + H + PEA+D +LL+Y R TA EA
Sbjct: 259 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 318
Query: 235 CAHPFFDELREPNARL 250
HP+F + + AR+
Sbjct: 319 MEHPYFYTVVKDQARM 334
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 124 bits (310), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 129/256 (50%), Gaps = 25/256 (9%)
Query: 7 PNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFR 66
PN+I+L S+ LV E+V + ++ L Q + ++ Y Y+I +
Sbjct: 92 PNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILK 142
Query: 67 GLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPE 126
L Y H++ + HRD+KP N+++D ++++ D+G A+ G+ + SR+++ PE
Sbjct: 143 ALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 201
Query: 127 LIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 185
L+ Y S+D+WS GC+LA ++ +P F G + DQLV I KVLGT E++
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYI 258
Query: 186 PNYT---DFRFPQI----KAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEA 234
Y D RF I W + H + PEA+D +LL+Y R TA EA
Sbjct: 259 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 318
Query: 235 CAHPFFDELREPNARL 250
HP+F + + AR+
Sbjct: 319 MEHPYFYTVVKDQARM 334
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 124 bits (310), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 139/262 (53%), Gaps = 25/262 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ ++H N+I L + F S E + +VME + ++ +V++ ++RM +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHERMSYL---- 131
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ G+ ++H+ + HRDLKP N++V +KI DFG A+ Y+ +
Sbjct: 132 -LYQMLCGIKHLHSAG-IIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVT 188
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I G Y ++DIWS GC++ E++ G LFPG + +DQ ++I+ LGTP E
Sbjct: 189 RYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPE 247
Query: 180 EIRCMNP---NYTDFRFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSP 225
++ + P Y + R P+ + + K+F +K +A DL S++L
Sbjct: 248 FMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 226 SLRCTALEACAHPFFDELREPN 247
S R + EA HP+ + +P+
Sbjct: 307 SKRISVDEALQHPYINVWYDPS 328
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 124 bits (310), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 139/262 (53%), Gaps = 25/262 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ ++H N+I L + F S E + +VME + ++ +V++ ++RM +
Sbjct: 78 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHERMSYL---- 132
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ G+ ++H+ + HRDLKP N++V +KI DFG A+ Y+ +
Sbjct: 133 -LYQMLCGIKHLHSAG-IIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVT 189
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I G Y ++DIWS GC++ E++ G LFPG + +DQ ++I+ LGTP E
Sbjct: 190 RYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPE 248
Query: 180 EIRCMNP---NYTDFRFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSP 225
++ + P Y + R P+ + + K+F +K +A DL S++L
Sbjct: 249 FMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 307
Query: 226 SLRCTALEACAHPFFDELREPN 247
S R + EA HP+ + +P+
Sbjct: 308 SKRISVDEALQHPYINVWYDPS 329
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 140/262 (53%), Gaps = 25/262 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ ++H N+I L + F S E + +VME + ++ +V++ ++RM +
Sbjct: 79 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHERMSYLL--- 134
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ G+ ++H+ + HRDLKP N++V +KI DFG A+ + ++ +
Sbjct: 135 --YQMLCGIKHLHSAG-IIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMVPFVVT 190
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I G Y ++DIWS GC++ E++ G LFPG + +DQ ++I+ LGTP E
Sbjct: 191 RYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPE 249
Query: 180 EIRCMNP---NYTDFRFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSP 225
++ + P Y + R P+ + + K+F +K +A DL S++L
Sbjct: 250 FMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 308
Query: 226 SLRCTALEACAHPFFDELREPN 247
S R + EA HP+ + +P+
Sbjct: 309 SKRISVDEALQHPYINVWYDPS 330
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 135/260 (51%), Gaps = 23/260 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ ++H N+ISL + F + E + LVME + ++ +V+ H ++RM +
Sbjct: 77 LKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-HMELDHERMSYL---- 131
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ G+ ++H+ + HRDLKP N++V +KI DFG A+ Y+ +
Sbjct: 132 -LYQMLCGIKHLHSAG-IIHRDLKPSNIVVKS-DCTLKILDFGLARTACTNFMMTPYVVT 188
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I G Y ++DIWS GC++ EL+ G +F G + +DQ ++I+ LGTP+ E
Sbjct: 189 RYYRAPEVILGMG-YAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAE 247
Query: 180 EIRCMNP---NYTDFR--FPQIKAH--------PWHKVFHKRMPPEAIDLASRLLQYSPS 226
+ + P NY + R +P IK P K +A DL S++L P
Sbjct: 248 FMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPD 307
Query: 227 LRCTALEACAHPFFDELREP 246
R + EA HP+ +P
Sbjct: 308 KRISVDEALRHPYITVWYDP 327
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 128/255 (50%), Gaps = 25/255 (9%)
Query: 7 PNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFR 66
PN+I+L S+ LV E+V + ++ L Q + ++ Y Y+I +
Sbjct: 92 PNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILK 142
Query: 67 GLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPE 126
L Y H++ + HRD+KP N+++D ++++ D+G A+ G+ + SR+++ PE
Sbjct: 143 ALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 201
Query: 127 LIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 185
L+ Y S+D+WS GC+LA ++ +P F G + DQLV I KVLGT E++
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYI 258
Query: 186 PNYT---DFRFPQI----KAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEA 234
Y D RF I W + H + PEA+D +LL+Y R TA EA
Sbjct: 259 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 318
Query: 235 CAHPFFDELREPNAR 249
HP+F + + AR
Sbjct: 319 MEHPYFYTVVKDQAR 333
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 137/255 (53%), Gaps = 23/255 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ ++H N+ISL + F + E + LVME + ++ +V++ ++RM +
Sbjct: 77 MKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYL---- 131
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ G+ ++H+ + HRDLKP N++V +KI DFG A+ Y+ +
Sbjct: 132 -LYQMLCGIKHLHSAG-IIHRDLKPSNIVVKS-DXTLKILDFGLARTAGTSFMMTPYVVT 188
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I G Y ++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E
Sbjct: 189 RYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 247
Query: 180 EIRCMNP---NYTDFR-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPS 226
++ + P NY + R FP++ P +K +A DL S++L P+
Sbjct: 248 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 307
Query: 227 LRCTALEACAHPFFD 241
R + +A HP+ +
Sbjct: 308 KRISVDDALQHPYIN 322
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 139/260 (53%), Gaps = 23/260 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ ++H N+ISL + F + E + LVME + ++ +V++ ++RM +
Sbjct: 71 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYL---- 125
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ G+ ++H+ + HRDLKP N++V +KI DFG A+ Y+ +
Sbjct: 126 -LYQMLCGIKHLHSAG-IIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVT 182
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I G Y ++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E
Sbjct: 183 RYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 241
Query: 180 EIRCMNP---NYTDFR-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPS 226
++ + P NY + R FP++ P +K +A DL S++L P+
Sbjct: 242 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 301
Query: 227 LRCTALEACAHPFFDELREP 246
R + +A HP+ + +P
Sbjct: 302 KRISVDDALQHPYINVWYDP 321
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 139/260 (53%), Gaps = 23/260 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ ++H N+ISL + F + E + LVME + ++ +V++ ++RM +
Sbjct: 76 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYL---- 130
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ G+ ++H+ + HRDLKP N++V +KI DFG A+ Y+ +
Sbjct: 131 -LYQMLCGIKHLHSAG-IIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVT 187
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I G Y ++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E
Sbjct: 188 RYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 246
Query: 180 EIRCMNP---NYTDFR-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPS 226
++ + P NY + R FP++ P +K +A DL S++L P+
Sbjct: 247 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 306
Query: 227 LRCTALEACAHPFFDELREP 246
R + +A HP+ + +P
Sbjct: 307 KRISVDDALQHPYINVWYDP 326
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 139/260 (53%), Gaps = 23/260 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ ++H N+ISL + F + E + LVME + ++ +V++ ++RM +
Sbjct: 78 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYL---- 132
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ G+ ++H+ + HRDLKP N++V +KI DFG A+ Y+ +
Sbjct: 133 -LYQMLCGIKHLHSAG-IIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVT 189
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I G Y ++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E
Sbjct: 190 RYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 248
Query: 180 EIRCMNP---NYTDFR-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPS 226
++ + P NY + R FP++ P +K +A DL S++L P+
Sbjct: 249 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 308
Query: 227 LRCTALEACAHPFFDELREP 246
R + +A HP+ + +P
Sbjct: 309 KRISVDDALQHPYINVWYDP 328
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 139/260 (53%), Gaps = 23/260 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ ++H N+ISL + F + E + LVME + ++ +V++ ++RM +
Sbjct: 77 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYL---- 131
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ G+ ++H+ + HRDLKP N++V +KI DFG A+ Y+ +
Sbjct: 132 -LYQMLCGIKHLHSAG-IIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVT 188
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I G Y ++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E
Sbjct: 189 RYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 247
Query: 180 EIRCMNP---NYTDFR-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPS 226
++ + P NY + R FP++ P +K +A DL S++L P+
Sbjct: 248 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 307
Query: 227 LRCTALEACAHPFFDELREP 246
R + +A HP+ + +P
Sbjct: 308 KRISVDDALQHPYINVWYDP 327
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 139/260 (53%), Gaps = 23/260 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ ++H N+ISL + F + E + LVME + ++ +V++ ++RM +
Sbjct: 77 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYL---- 131
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ G+ ++H+ + HRDLKP N++V +KI DFG A+ Y+ +
Sbjct: 132 -LYQMLCGIKHLHSAG-IIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVT 188
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I G Y ++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E
Sbjct: 189 RYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 247
Query: 180 EIRCMNP---NYTDFR-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPS 226
++ + P NY + R FP++ P +K +A DL S++L P+
Sbjct: 248 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 307
Query: 227 LRCTALEACAHPFFDELREP 246
R + +A HP+ + +P
Sbjct: 308 KRISVDDALQHPYINVWYDP 327
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 139/260 (53%), Gaps = 23/260 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ ++H N+ISL + F + E + LVME + ++ +V++ ++RM +
Sbjct: 78 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYL---- 132
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ G+ ++H+ + HRDLKP N++V +KI DFG A+ Y+ +
Sbjct: 133 -LYQMLCGIKHLHSAG-IIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVT 189
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I G Y ++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E
Sbjct: 190 RYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 248
Query: 180 EIRCMNP---NYTDFR-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPS 226
++ + P NY + R FP++ P +K +A DL S++L P+
Sbjct: 249 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 308
Query: 227 LRCTALEACAHPFFDELREP 246
R + +A HP+ + +P
Sbjct: 309 KRISVDDALQHPYINVWYDP 328
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 139/260 (53%), Gaps = 23/260 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ ++H N+ISL + F + E + LVME + ++ +V++ ++RM +
Sbjct: 71 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYL---- 125
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ G+ ++H+ + HRDLKP N++V +KI DFG A+ Y+ +
Sbjct: 126 -LYQMLCGIKHLHSAG-IIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVT 182
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I G Y ++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E
Sbjct: 183 RYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 241
Query: 180 EIRCMNP---NYTDFR-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPS 226
++ + P NY + R FP++ P +K +A DL S++L P+
Sbjct: 242 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 301
Query: 227 LRCTALEACAHPFFDELREP 246
R + +A HP+ + +P
Sbjct: 302 KRISVDDALQHPYINVWYDP 321
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 139/260 (53%), Gaps = 23/260 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ ++H N+ISL + F + E + LVME + ++ +V++ ++RM +
Sbjct: 115 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYL---- 169
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ G+ ++H+ + HRDLKP N++V +KI DFG A+ Y+ +
Sbjct: 170 -LYQMLCGIKHLHSAG-IIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVT 226
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I G Y ++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E
Sbjct: 227 RYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 285
Query: 180 EIRCMNP---NYTDFR-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPS 226
++ + P NY + R FP++ P +K +A DL S++L P+
Sbjct: 286 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 345
Query: 227 LRCTALEACAHPFFDELREP 246
R + +A HP+ + +P
Sbjct: 346 KRISVDDALQHPYINVWYDP 365
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 139/260 (53%), Gaps = 23/260 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ ++H N+ISL + F + E + LVME + ++ +V++ ++RM +
Sbjct: 70 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYL---- 124
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ G+ ++H+ + HRDLKP N++V +KI DFG A+ Y+ +
Sbjct: 125 -LYQMLCGIKHLHSAG-IIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVT 181
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I G Y ++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E
Sbjct: 182 RYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 240
Query: 180 EIRCMNP---NYTDFR-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPS 226
++ + P NY + R FP++ P +K +A DL S++L P+
Sbjct: 241 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 300
Query: 227 LRCTALEACAHPFFDELREP 246
R + +A HP+ + +P
Sbjct: 301 KRISVDDALQHPYINVWYDP 320
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 124/246 (50%), Gaps = 25/246 (10%)
Query: 7 PNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFR 66
PN+I+L S+ LV E+V + ++ L Q + ++ Y Y+I +
Sbjct: 92 PNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILK 142
Query: 67 GLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPE 126
L Y H++ + HRD+KP N+++D ++++ D+G A+ G+ + SR+++ PE
Sbjct: 143 ALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 201
Query: 127 LIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 185
L+ Y S+D+WS GC+LA ++ +P F G + DQLV I KVLGT E++
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYI 258
Query: 186 PNYT---DFRFPQI----KAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEA 234
Y D RF I W + H + PEA+D +LL+Y R TA EA
Sbjct: 259 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 318
Query: 235 CAHPFF 240
HP+F
Sbjct: 319 MEHPYF 324
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 124/246 (50%), Gaps = 25/246 (10%)
Query: 7 PNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFR 66
PN+I+L S+ LV E+V + ++ L Q + ++ Y Y+I +
Sbjct: 90 PNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILK 140
Query: 67 GLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPE 126
L Y H++ + HRD+KP N+++D ++++ D+G A+ G+ + SR+++ PE
Sbjct: 141 ALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 199
Query: 127 LIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 185
L+ Y S+D+WS GC+LA ++ +P F G + DQLV I KVLGT E++
Sbjct: 200 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYI 256
Query: 186 PNYT---DFRFPQI----KAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEA 234
Y D RF I W + H + PEA+D +LL+Y R TA EA
Sbjct: 257 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 316
Query: 235 CAHPFF 240
HP+F
Sbjct: 317 MEHPYF 322
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 139/260 (53%), Gaps = 23/260 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ ++H N+ISL + F + E + LVME + ++ +V++ ++RM +
Sbjct: 115 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYLL--- 170
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ G+ ++H+ + HRDLKP N++V +KI DFG A+ Y+ +
Sbjct: 171 --YQMLCGIKHLHSAG-IIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVT 226
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I G Y ++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E
Sbjct: 227 RYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 285
Query: 180 EIRCMNP---NYTDFR-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPS 226
++ + P NY + R FP++ P +K +A DL S++L P+
Sbjct: 286 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 345
Query: 227 LRCTALEACAHPFFDELREP 246
R + +A HP+ + +P
Sbjct: 346 KRISVDDALQHPYINVWYDP 365
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 134/260 (51%), Gaps = 23/260 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
++ ++H N+ISL + F + E + LVME + ++ +V+ H ++RM +
Sbjct: 75 LKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-HMELDHERMSYL---- 129
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ G+ ++H+ + HRDLKP N++V +KI DFG A+ Y+ +
Sbjct: 130 -LYQMLCGIKHLHSAG-IIHRDLKPSNIVVKS-DCTLKILDFGLARTASTNFMMTPYVVT 186
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I G Y ++DIWS GC++ EL+ G +F G + +DQ ++I+ LGTP+ E
Sbjct: 187 RYYRAPEVILGMG-YKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAE 245
Query: 180 EIRCMNP---NYTDFR--FPQIKAH--------PWHKVFHKRMPPEAIDLASRLLQYSPS 226
+ + P NY + R +P I P K +A DL S++L P
Sbjct: 246 FMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPD 305
Query: 227 LRCTALEACAHPFFDELREP 246
R + EA HP+ +P
Sbjct: 306 KRISVDEALRHPYITVWYDP 325
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 124/246 (50%), Gaps = 25/246 (10%)
Query: 7 PNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFR 66
PN+I+L S+ LV E+V + ++ L Q + ++ Y Y+I +
Sbjct: 91 PNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILK 141
Query: 67 GLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPE 126
L Y H++ + HRD+KP N+++D ++++ D+G A+ G+ + SR+++ PE
Sbjct: 142 ALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 200
Query: 127 LIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 185
L+ Y S+D+WS GC+LA ++ +P F G + DQLV I KVLGT E++
Sbjct: 201 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYI 257
Query: 186 PNYT---DFRFPQI----KAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEA 234
Y D RF I W + H + PEA+D +LL+Y R TA EA
Sbjct: 258 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 317
Query: 235 CAHPFF 240
HP+F
Sbjct: 318 MEHPYF 323
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 124/246 (50%), Gaps = 25/246 (10%)
Query: 7 PNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFR 66
PN+I+L S+ LV E+V + ++ L Q + ++ Y Y+I +
Sbjct: 92 PNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILK 142
Query: 67 GLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPE 126
L Y H++ + HRD+KP N+++D ++++ D+G A+ G+ + SR+++ PE
Sbjct: 143 ALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 201
Query: 127 LIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 185
L+ Y S+D+WS GC+LA ++ +P F G + DQLV I KVLGT E++
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYI 258
Query: 186 PNYT---DFRFPQI----KAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEA 234
Y D RF I W + H + PEA+D +LL+Y R TA EA
Sbjct: 259 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 318
Query: 235 CAHPFF 240
HP+F
Sbjct: 319 MEHPYF 324
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 124/246 (50%), Gaps = 25/246 (10%)
Query: 7 PNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFR 66
PN+I+L S+ LV E+V + ++ L Q + ++ Y Y+I +
Sbjct: 92 PNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILK 142
Query: 67 GLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPE 126
L Y H++ + HRD+KP N+++D ++++ D+G A+ G+ + SR+++ PE
Sbjct: 143 ALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 201
Query: 127 LIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 185
L+ Y S+D+WS GC+LA ++ +P F G + DQLV I KVLGT E++
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYI 258
Query: 186 PNYT---DFRFPQI----KAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEA 234
Y D RF I W + H + PEA+D +LL+Y R TA EA
Sbjct: 259 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 318
Query: 235 CAHPFF 240
HP+F
Sbjct: 319 MEHPYF 324
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 154/307 (50%), Gaps = 26/307 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ ++H N+I L + F S E + +VME + ++ +V++ ++RM +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHERMSYLL--- 132
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ G+ ++H+ + HRDLKP N++V +KI DFG A+ + +
Sbjct: 133 --YQMLCGIKHLHSAG-IIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPEVVT 188
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I G Y ++DIWS GC++ E++ G LFPG + +DQ ++I+ LGTP E
Sbjct: 189 RYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPE 247
Query: 180 EIRCMNP---NYTDFRFPQIKAHPWHKVFHKRMPP-----------EAIDLASRLLQYSP 225
++ + P Y + R P+ + + K+F + P +A DL S++L
Sbjct: 248 FMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDA 306
Query: 226 SLRCTALEACAHPFFDELREPN-ARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKR 284
S R + EA HP+ + +P+ A P + + ++ EL+ K + D KR
Sbjct: 307 SKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEVMDLPKR 366
Query: 285 QLGLNFL 291
LN
Sbjct: 367 PTTLNLF 373
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 120/226 (53%), Gaps = 26/226 (11%)
Query: 29 LVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLL 88
LV EY+ + ++ L Q + ++ Y Y++ + L Y H+ + HRD+KP N++
Sbjct: 112 LVFEYINNTDFKQLY------QILTDFDIRFYMYELLKALDYCHS-KGIMHRDVKPHNVM 164
Query: 89 VDPLTHQVKICDFGSAKQLI-AGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVL 147
+D ++++ D+G A+ A E N+ + SR+++ PEL+ Y S+D+WS GC+L
Sbjct: 165 IDHQQKKLRLIDWGLAEFYHPAQEYNVR-VASRYFKGPELLVDYQMYDYSLDMWSLGCML 223
Query: 148 AELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRC--------MNPNYTDFRFPQIKA 198
A ++ +P F G++ DQLV I KVLGT EE+ ++P++ D Q
Sbjct: 224 ASMIFRREPFFHGQDNYDQLVRIAKVLGT---EELYGYLKKYHIDLDPHFNDI-LGQHSR 279
Query: 199 HPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
W H + PEA+DL +LL+Y R TA EA HP+F
Sbjct: 280 KRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 120/226 (53%), Gaps = 26/226 (11%)
Query: 29 LVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLL 88
LV EY+ + ++ L Q + ++ Y Y++ + L Y H+ + HRD+KP N++
Sbjct: 117 LVFEYINNTDFKQLY------QILTDFDIRFYMYELLKALDYCHS-KGIMHRDVKPHNVM 169
Query: 89 VDPLTHQVKICDFGSAKQLI-AGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVL 147
+D ++++ D+G A+ A E N+ + SR+++ PEL+ Y S+D+WS GC+L
Sbjct: 170 IDHQQKKLRLIDWGLAEFYHPAQEYNVR-VASRYFKGPELLVDYQMYDYSLDMWSLGCML 228
Query: 148 AELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRC--------MNPNYTDFRFPQIKA 198
A ++ +P F G++ DQLV I KVLGT EE+ ++P++ D Q
Sbjct: 229 ASMIFRREPFFHGQDNYDQLVRIAKVLGT---EELYGYLKKYHIDLDPHFNDI-LGQHSR 284
Query: 199 HPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
W H + PEA+DL +LL+Y R TA EA HP+F
Sbjct: 285 KRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 139/262 (53%), Gaps = 25/262 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ ++H N+I L + F S E + +VME + ++ +V++ ++RM +
Sbjct: 82 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHERMSYL---- 136
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ G+ ++H+ + HRDLKP N++V +KI DFG A+ Y+ +
Sbjct: 137 -LYQMLCGIKHLHSAG-IIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVT 193
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I G Y ++D+WS GC++ E++ + LFPG + +DQ ++I+ LGTP E
Sbjct: 194 RYYRAPEVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPE 252
Query: 180 EIRCMNP---NYTDFRFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSP 225
++ + P Y + R P+ + + K+F +K +A DL S++L
Sbjct: 253 FMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 311
Query: 226 SLRCTALEACAHPFFDELREPN 247
S R + EA HP+ + +P+
Sbjct: 312 SKRISVDEALQHPYINVWYDPS 333
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 139/262 (53%), Gaps = 25/262 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ ++H N+I L + F S E + +VME + ++ +V++ ++RM +
Sbjct: 71 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHERMSYL---- 125
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ G+ ++H+ + HRDLKP N++V +KI DFG A+ Y+ +
Sbjct: 126 -LYQMLCGIKHLHSAG-IIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVT 182
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I G Y ++D+WS GC++ E++ + LFPG + +DQ ++I+ LGTP E
Sbjct: 183 RYYRAPEVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPE 241
Query: 180 EIRCMNP---NYTDFRFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSP 225
++ + P Y + R P+ + + K+F +K +A DL S++L
Sbjct: 242 FMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 300
Query: 226 SLRCTALEACAHPFFDELREPN 247
S R + EA HP+ + +P+
Sbjct: 301 SKRISVDEALQHPYINVWYDPS 322
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 142/290 (48%), Gaps = 40/290 (13%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHY--SSANQR---MPLI 55
+R + HPNVISL+ F S + + L+ +Y ++ ++K + S AN++ +P
Sbjct: 72 LRELKHPNVISLQKVFLSHADRK---VWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRG 128
Query: 56 YVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLV---DPLTHQVKICDFGSAKQL---IA 109
VK YQI G+ Y+H V HRDLKP N+LV P +VKI D G A+ +
Sbjct: 129 MVKSLLYQILDGIHYLH-ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLK 187
Query: 110 GEANISYICSRF-YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV----- 163
A++ + F YRAPEL+ GA YT +IDIW+ GC+ AELL +P+F
Sbjct: 188 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSN 247
Query: 164 ----DQLVEIIKVLGTPTR---EEIRCMNPNYT---DFRFPQ------IKAHPWHKVFHK 207
DQL I V+G P E+I+ M + T DFR IK HKV
Sbjct: 248 PYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKV--- 304
Query: 208 RMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLP 257
+ +A L +LL P R T+ +A P+F E P + + G +P
Sbjct: 305 KPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPTSDVFAGCQIP 354
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 138/262 (52%), Gaps = 25/262 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ ++H N+I L + F S E + +VME + ++ +V++ ++RM +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHERMSYL---- 131
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ G+ ++H+ + HRDLKP N++V +KI DFG A+ + +
Sbjct: 132 -LYQMLCGIKHLHSAG-IIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMEPEVVT 188
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I G Y ++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP
Sbjct: 189 RYYRAPEVILGMG-YKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPA 247
Query: 180 EIRCMNP---NYTDFRFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSP 225
++ + P NY + R P+ + + K+F +K +A DL S++L
Sbjct: 248 FMKKLQPTVRNYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 226 SLRCTALEACAHPFFDELREPN 247
S R + EA HP+ + +P+
Sbjct: 307 SKRISVDEALQHPYINVWYDPS 328
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 138/262 (52%), Gaps = 25/262 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNEL-FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ ++H N+I L + F S E + +VME + ++ +V++ ++RM +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHERMSYL---- 131
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
YQ+ G+ ++H+ + HRDLKP N++V +KI DFG A+ + +
Sbjct: 132 -LYQMLCGIKHLHSAG-IIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMEPEVVT 188
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
R+YRAPE+I G Y ++D+WS GC++ E++ + LFPG + +DQ ++I+ LGTP E
Sbjct: 189 RYYRAPEVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPE 247
Query: 180 EIRCMNP---NYTDFRFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSP 225
++ + P Y + R P+ + + K+F +K +A DL S++L
Sbjct: 248 FMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 226 SLRCTALEACAHPFFDELREPN 247
S R + EA HP+ + +P+
Sbjct: 307 SKRISVDEALQHPYINVWYDPS 328
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 133/274 (48%), Gaps = 45/274 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
+R D N +++ H + T +N + + E + ++Y ++K +PL V+ +
Sbjct: 150 LRKQDKDNTMNVIHMLENFTFRNHICMTF--ELLSMNLYELIKKNKFQGFSLPL--VRKF 205
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ-VKICDFGSAKQLIAGEANISYICS 119
+ I + L +H R+ H DLKP+N+L+ +K+ DFGS+ + + I S
Sbjct: 206 AHSILQCLDALHK-NRIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYTXIQS 262
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
RFYRAPE+I GA Y ID+WS GC+LAELL G PL PGE+ DQL +I++LG P++
Sbjct: 263 RFYRAPEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQ- 320
Query: 180 EIRCMNPNYTDFRFPQIKAHPWH------------------KVFHKRMPPEA-------- 213
+ ++ + F K +P + + R PPE+
Sbjct: 321 --KLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALK 378
Query: 214 -------IDLASRLLQYSPSLRCTALEACAHPFF 240
+D + L++ P++R T +A HP+
Sbjct: 379 GCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 133/274 (48%), Gaps = 45/274 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
+R D N +++ H + T +N + + E + ++Y ++K +PL V+ +
Sbjct: 150 LRKQDKDNTMNVIHMLENFTFRNHICMTF--ELLSMNLYELIKKNKFQGFSLPL--VRKF 205
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ-VKICDFGSAKQLIAGEANISYICS 119
+ I + L +H R+ H DLKP+N+L+ +K+ DFGS+ + + I S
Sbjct: 206 AHSILQCLDALHK-NRIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYTXIQS 262
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
RFYRAPE+I GA Y ID+WS GC+LAELL G PL PGE+ DQL +I++LG P++
Sbjct: 263 RFYRAPEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQ- 320
Query: 180 EIRCMNPNYTDFRFPQIKAHPWH------------------KVFHKRMPPEA-------- 213
+ ++ + F K +P + + R PPE+
Sbjct: 321 --KLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALK 378
Query: 214 -------IDLASRLLQYSPSLRCTALEACAHPFF 240
+D + L++ P++R T +A HP+
Sbjct: 379 GCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 131/274 (47%), Gaps = 45/274 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
+R D N +++ H + T +N + + E + ++Y ++K +PL V+ +
Sbjct: 150 LRKQDKDNTMNVIHMLENFTFRNHICMTF--ELLSMNLYELIKKNKFQGFSLPL--VRKF 205
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ-VKICDFGSAKQLIAGEANISYICS 119
+ I + L +H R+ H DLKP+N+L+ +K+ DFGS+ + I S
Sbjct: 206 AHSILQCLDALHK-NRIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYXXIQS 262
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
RFYRAPE+I GA Y ID+WS GC+LAELL G PL PGE+ DQL +I++LG P +
Sbjct: 263 RFYRAPEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQ- 320
Query: 180 EIRCMNPNYTDFRFPQIKAHPWH------------------KVFHKRMPPEA-------- 213
+ ++ + F K +P + + R PPE+
Sbjct: 321 --KLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALK 378
Query: 214 -------IDLASRLLQYSPSLRCTALEACAHPFF 240
+D + L++ P++R T +A HP+
Sbjct: 379 GCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 116/240 (48%), Gaps = 7/240 (2%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
+ +HPNV+ L ++ + E+ + LV E+V + + L +P +K
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIKDL 117
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
Q RGL ++H + HRDLKP+N+LV VK+ DFG A+ A + +
Sbjct: 118 MRQFLRGLDFLHANC-IVHRDLKPENILVTS-GGTVKLADFGLARIYSYQMALFPVVVTL 175
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 180
+YRAPE++ +T Y T +D+WS GC+ AE+ +PLF G + DQL +I ++G P E+
Sbjct: 176 WYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP-ED 233
Query: 181 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
+ + FP P V + M L +L ++P R +A A H +
Sbjct: 234 DWPRDVSLPRGAFPPRGPRPVQSVVPE-MEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 116/240 (48%), Gaps = 7/240 (2%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
+ +HPNV+ L ++ + E+ + LV E+V + + L +P +K
Sbjct: 68 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIKDL 125
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
Q RGL ++H + HRDLKP+N+LV VK+ DFG A+ A + +
Sbjct: 126 MRQFLRGLDFLHA-NCIVHRDLKPENILVTS-GGTVKLADFGLARIYSYQMALTPVVVTL 183
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 180
+YRAPE++ +T Y T +D+WS GC+ AE+ +PLF G + DQL +I ++G P E+
Sbjct: 184 WYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP-ED 241
Query: 181 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
+ + FP P V + M L +L ++P R +A A H +
Sbjct: 242 DWPRDVSLPRGAFPPRGPRPVQSVVPE-MEESGAQLLLEMLTFNPHKRISAFRALQHSYL 300
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 116/240 (48%), Gaps = 7/240 (2%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
+ +HPNV+ L ++ + E+ + LV E+V + + L +P +K
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIKDL 117
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
Q RGL ++H + HRDLKP+N+LV VK+ DFG A+ A + +
Sbjct: 118 MRQFLRGLDFLHANC-IVHRDLKPENILVTS-GGTVKLADFGLARIYSYQMALAPVVVTL 175
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 180
+YRAPE++ +T Y T +D+WS GC+ AE+ +PLF G + DQL +I ++G P E+
Sbjct: 176 WYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP-ED 233
Query: 181 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
+ + FP P V + M L +L ++P R +A A H +
Sbjct: 234 DWPRDVSLPRGAFPPRGPRPVQSVVPE-MEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 116/240 (48%), Gaps = 7/240 (2%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
+ +HPNV+ L ++ + E+ + LV E+V + + L +P +K
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIKDL 117
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
Q RGL ++H + HRDLKP+N+LV VK+ DFG A+ A + +
Sbjct: 118 MRQFLRGLDFLHANC-IVHRDLKPENILVTS-GGTVKLADFGLARIYSYQMALDPVVVTL 175
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 180
+YRAPE++ +T Y T +D+WS GC+ AE+ +PLF G + DQL +I ++G P E+
Sbjct: 176 WYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP-ED 233
Query: 181 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
+ + FP P V + M L +L ++P R +A A H +
Sbjct: 234 DWPRDVSLPRGAFPPRGPRPVQSVVPE-MEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 117/267 (43%), Gaps = 73/267 (27%)
Query: 55 IYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANI 114
+++K Y + G+ Y+H+ + HRDLKP N LV+ VK+CDFG A+ + E
Sbjct: 156 LHIKTLLYNLLVGVKYVHSAG-ILHRDLKPANCLVNQDC-SVKVCDFGLARTVDYPENGN 213
Query: 115 S----------------------------YICSRFYRAPELIFGATEYTTSIDIWSAGCV 146
S ++ +R+YRAPELI YT +ID+WS GC+
Sbjct: 214 SQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCI 273
Query: 147 LAELL-----------LGQPLFPGENAV--------------------DQLVEIIKVLGT 175
AELL PLFPG + DQL I +LGT
Sbjct: 274 FAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGT 333
Query: 176 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMP---PEAIDLASRLLQYSPSLRCTAL 232
P+ E+I + R+ +I +R P +AI L R+L ++P+ R T
Sbjct: 334 PSEEDIEALEKEDAK-RYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITIN 392
Query: 233 EACAHPFFDELR----EPNA----RLP 251
E AHPFF E+R E NA RLP
Sbjct: 393 ECLAHPFFKEVRIAEVETNATEKVRLP 419
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 110/251 (43%), Gaps = 64/251 (25%)
Query: 56 YVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANI- 114
+VK Y + G +IH + HRDLKP N L++ VKICDFG A+ I + +I
Sbjct: 132 HVKTILYNLLLGEKFIHE-SGIIHRDLKPANCLLNQ-DCSVKICDFGLART-INSDKDIH 188
Query: 115 --------------------------SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLA 148
S++ +R+YRAPELI YT SIDIWS GC+ A
Sbjct: 189 IVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFA 248
Query: 149 ELLLGQ-----------PLFPGENAV-----------------DQLVEIIKVLGTPTREE 180
ELL PLFPG + DQL I V+GTP E+
Sbjct: 249 ELLNMMKSHINNPTNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEED 308
Query: 181 IRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 236
++C+ Y FP K + + E IDL +L+++ R T +A +
Sbjct: 309 LKCITKQEVIKYIKL-FPTRDGIDLSKKY-SSISKEGIDLLESMLRFNAQKRITIDKALS 366
Query: 237 HPFFDELREPN 247
HP+ ++R+ N
Sbjct: 367 HPYLKDVRKEN 377
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 117/247 (47%), Gaps = 63/247 (25%)
Query: 56 YVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA-GEANI 114
++K Y + G +IH + HRDLKP N L++ VK+CDFG A+ + + + NI
Sbjct: 130 HIKTILYNLLLGENFIHE-SGIIHRDLKPANCLLNQ-DCSVKVCDFGLARTINSEKDTNI 187
Query: 115 ----------------------SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL- 151
S++ +R+YRAPELI YT SIDIWS GC+ AELL
Sbjct: 188 VNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
Query: 152 LGQ----------PLFPGENAV-----------------DQLVEIIKVLGTPTREEIRCM 184
+ Q PLFPG + DQL I ++GTPT ++++ +
Sbjct: 248 MLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNI 307
Query: 185 N-PNYTDFRFPQIKAHPWHKVFHKR-----MPPEAIDLASRLLQYSPSLRCTALEACAHP 238
N P + IK P K + + + + I+L +L+++P+ R T +A HP
Sbjct: 308 NKPEVIKY----IKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHP 363
Query: 239 FFDELRE 245
+ ++R+
Sbjct: 364 YLKDVRK 370
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 91/152 (59%), Gaps = 7/152 (4%)
Query: 27 LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVP-RVCHRDLKPQ 85
L LV E + ++Y +L++ + + L + + Q+ L ++ T + H DLKP+
Sbjct: 112 LCLVFEMLSYNLYDLLRNTNFRGVSLNL--TRKFAQQMCTALLFLATPELSIIHCDLKPE 169
Query: 86 N-LLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAG 144
N LL +P +KI DFGS+ QL G+ I SRFYR+PE++ G Y +ID+WS G
Sbjct: 170 NILLCNPKRSAIKIVDFGSSCQL--GQRIYQXIQSRFYRSPEVLLGMP-YDLAIDMWSLG 226
Query: 145 CVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
C+L E+ G+PLF G N VDQ+ +I++VLG P
Sbjct: 227 CILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 258
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 91/152 (59%), Gaps = 7/152 (4%)
Query: 27 LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVP-RVCHRDLKPQ 85
L LV E + ++Y +L++ + + L + + Q+ L ++ T + H DLKP+
Sbjct: 131 LCLVFEMLSYNLYDLLRNTNFRGVSLNL--TRKFAQQMCTALLFLATPELSIIHCDLKPE 188
Query: 86 N-LLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAG 144
N LL +P +KI DFGS+ QL G+ I SRFYR+PE++ G Y +ID+WS G
Sbjct: 189 NILLCNPKRSAIKIVDFGSSCQL--GQRIYQXIQSRFYRSPEVLLGMP-YDLAIDMWSLG 245
Query: 145 CVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
C+L E+ G+PLF G N VDQ+ +I++VLG P
Sbjct: 246 CILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 277
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 91/152 (59%), Gaps = 7/152 (4%)
Query: 27 LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVP-RVCHRDLKPQ 85
L LV E + ++Y +L++ + + L + + Q+ L ++ T + H DLKP+
Sbjct: 131 LCLVFEMLSYNLYDLLRNTNFRGVSLNL--TRKFAQQMCTALLFLATPELSIIHCDLKPE 188
Query: 86 N-LLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAG 144
N LL +P +KI DFGS+ QL G+ I SRFYR+PE++ G Y +ID+WS G
Sbjct: 189 NILLCNPKRXAIKIVDFGSSCQL--GQRIYQXIQSRFYRSPEVLLGMP-YDLAIDMWSLG 245
Query: 145 CVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
C+L E+ G+PLF G N VDQ+ +I++VLG P
Sbjct: 246 CILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 277
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 130/277 (46%), Gaps = 40/277 (14%)
Query: 17 FSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPR 76
F+ N + + +V E + E++ ++K Y ++ +PLIYVK + Q+ GL Y+H
Sbjct: 95 FNHKGPNGVHVVMVFEVLGENLLALIKKYE--HRGIPLIYVKQISKQLLLGLDYMHRRCG 152
Query: 77 VCHRDLKPQNLLVDPLTH-----QVKICDFGSAKQLIAGEANISYICSRFYRAPELIFGA 131
+ H D+KP+N+L++ + Q+KI D G+A E + I +R YR+PE++ GA
Sbjct: 153 IIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--CWYDEHYTNSIQTREYRSPEVLLGA 210
Query: 132 TEYTTSIDIWSAGCVLAELLLGQPLF-PGENAV-----DQLVEIIKVLGTPTREEIRCMN 185
+ DIWS C++ EL+ G LF P E D + +II++LG +R N
Sbjct: 211 P-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLR--N 267
Query: 186 PNYTDFRF---------PQIKAHPWHKV------FHKRMPPEAIDLASRLLQYSPSLRCT 230
YT F ++K P V F K E D S +LQ P R
Sbjct: 268 GKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 327
Query: 231 ALEACAHPFF------DELREPNARL-PNGRPLPPLF 260
A HP+ +E+R P+ L +G +P F
Sbjct: 328 AGGLVNHPWLKDTLGMEEIRVPDRELYGSGSDIPGWF 364
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 130/277 (46%), Gaps = 40/277 (14%)
Query: 17 FSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPR 76
F+ N + + +V E + E++ ++K Y ++ +PLIYVK + Q+ GL Y+H
Sbjct: 95 FNHKGPNGVHVVMVFEVLGENLLALIKKYE--HRGIPLIYVKQISKQLLLGLDYMHRRCG 152
Query: 77 VCHRDLKPQNLLVDPLTH-----QVKICDFGSAKQLIAGEANISYICSRFYRAPELIFGA 131
+ H D+KP+N+L++ + Q+KI D G+A E + I +R YR+PE++ GA
Sbjct: 153 IIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--CWYDEHYTNSIQTREYRSPEVLLGA 210
Query: 132 TEYTTSIDIWSAGCVLAELLLGQPLF-PGENAV-----DQLVEIIKVLGTPTREEIRCMN 185
+ DIWS C++ EL+ G LF P E D + +II++LG +R N
Sbjct: 211 P-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLR--N 267
Query: 186 PNYTDFRF---------PQIKAHPWHKV------FHKRMPPEAIDLASRLLQYSPSLRCT 230
YT F ++K P V F K E D S +LQ P R
Sbjct: 268 GKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 327
Query: 231 ALEACAHPFF------DELREPNARL-PNGRPLPPLF 260
A HP+ +E+R P+ L +G +P F
Sbjct: 328 AGGLVNHPWLKDTLGMEEIRVPDRELYGSGSDIPGWF 364
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 112/243 (46%), Gaps = 40/243 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVME-YVPESMYRVLKHYSSANQRMPLIYVKL 59
++ +DHPN++ L F +++ + LV E Y ++ + + +R +
Sbjct: 103 LKQLDHPNIMKLYEFF-----EDKGYFYLVGEVYTGGELFDEI----ISRKRFSEVDAAR 153
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ--VKICDFGSAKQLIAGEANISYI 117
Q+ G+ Y+H ++ HRDLKP+NLL++ + ++I DFG + A + I
Sbjct: 154 IIRQVLSGITYMHK-NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI 212
Query: 118 CSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 177
+ +Y APE++ G Y D+WS G +L LL G P F G N D L ++ K
Sbjct: 213 GTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK------ 264
Query: 178 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
YT F PQ W KV A DL ++L Y PS+R +A +A H
Sbjct: 265 --------GKYT-FELPQ-----WKKV-----SESAKDLIRKMLTYVPSMRISARDALDH 305
Query: 238 PFF 240
+
Sbjct: 306 EWI 308
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 112/243 (46%), Gaps = 40/243 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVME-YVPESMYRVLKHYSSANQRMPLIYVKL 59
++ +DHPN++ L F +++ + LV E Y ++ + + +R +
Sbjct: 104 LKQLDHPNIMKLYEFF-----EDKGYFYLVGEVYTGGELFDEI----ISRKRFSEVDAAR 154
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ--VKICDFGSAKQLIAGEANISYI 117
Q+ G+ Y+H ++ HRDLKP+NLL++ + ++I DFG + A + I
Sbjct: 155 IIRQVLSGITYMHK-NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI 213
Query: 118 CSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 177
+ +Y APE++ G Y D+WS G +L LL G P F G N D L ++ K
Sbjct: 214 GTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK------ 265
Query: 178 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
YT F PQ W KV A DL ++L Y PS+R +A +A H
Sbjct: 266 --------GKYT-FELPQ-----WKKV-----SESAKDLIRKMLTYVPSMRISARDALDH 306
Query: 238 PFF 240
+
Sbjct: 307 EWI 309
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 112/243 (46%), Gaps = 40/243 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVME-YVPESMYRVLKHYSSANQRMPLIYVKL 59
++ +DHPN++ L F +++ + LV E Y ++ + + +R +
Sbjct: 80 LKQLDHPNIMKLYEFF-----EDKGYFYLVGEVYTGGELFDEI----ISRKRFSEVDAAR 130
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ--VKICDFGSAKQLIAGEANISYI 117
Q+ G+ Y+H ++ HRDLKP+NLL++ + ++I DFG + A + I
Sbjct: 131 IIRQVLSGITYMHK-NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI 189
Query: 118 CSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 177
+ +Y APE++ G Y D+WS G +L LL G P F G N D L ++ K
Sbjct: 190 GTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK------ 241
Query: 178 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
YT F PQ W KV A DL ++L Y PS+R +A +A H
Sbjct: 242 --------GKYT-FELPQ-----WKKV-----SESAKDLIRKMLTYVPSMRISARDALDH 282
Query: 238 PFF 240
+
Sbjct: 283 EWI 285
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 112/242 (46%), Gaps = 40/242 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVME-YVPESMYRVLKHYSSANQRMPLIYVKL 59
++ +DHPN++ L F +++ + LV E Y ++ + + +R +
Sbjct: 86 LKQLDHPNIMKLYEFF-----EDKGYFYLVGEVYTGGELFDEI----ISRKRFSEVDAAR 136
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ--VKICDFGSAKQLIAGEANISYI 117
Q+ G+ Y+H ++ HRDLKP+NLL++ + ++I DFG + A + I
Sbjct: 137 IIRQVLSGITYMHK-NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI 195
Query: 118 CSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 177
+ +Y APE++ G Y D+WS G +L LL G P F G N D L ++ K
Sbjct: 196 GTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK------ 247
Query: 178 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
YT F PQ W KV A DL ++L Y PS+R +A +A H
Sbjct: 248 --------GKYT-FELPQ-----WKKV-----SESAKDLIRKMLTYVPSMRISARDALDH 288
Query: 238 PF 239
+
Sbjct: 289 EW 290
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 108/242 (44%), Gaps = 40/242 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVME-YVPESMYRVLKHYSSANQRMPLIYVKL 59
++ +DHPN+ L F +++ + LV E Y ++ + + +R +
Sbjct: 80 LKQLDHPNIXKLYEFF-----EDKGYFYLVGEVYTGGELFDEI----ISRKRFSEVDAAR 130
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ--VKICDFGSAKQLIAGEANISYI 117
Q+ G+ Y H ++ HRDLKP+NLL++ + ++I DFG + A + I
Sbjct: 131 IIRQVLSGITYXHK-NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKI 189
Query: 118 CSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 177
+ +Y APE++ G Y D+WS G +L LL G P F G N D L ++ K
Sbjct: 190 GTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK------ 241
Query: 178 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
YT F PQ W KV A DL + L Y PS R +A +A H
Sbjct: 242 --------GKYT-FELPQ-----WKKV-----SESAKDLIRKXLTYVPSXRISARDALDH 282
Query: 238 PF 239
+
Sbjct: 283 EW 284
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 116/269 (43%), Gaps = 57/269 (21%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ +DHPN++ L ++S Y V + Y+ +I K +
Sbjct: 75 LKKLDHPNIMKLFEILEDSSS----------------FYIVGELYTGGELFDEIIKRKRF 118
Query: 61 T--------YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ--VKICDFGSAKQLIAG 110
+ Q+F G+ Y+H + HRDLKP+N+L++ +KI DFG +
Sbjct: 119 SEHDAARIIKQVFSGITYMHK-HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177
Query: 111 EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
I + +Y APE++ G Y D+WSAG +L LL G P F G+N D I+
Sbjct: 178 TKMKDRIGTAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYD----IL 231
Query: 171 KVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 230
K R Y F PQ W + +A DL ++L + PSLR T
Sbjct: 232 K----------RVETGKYA-FDLPQ-----WRTI-----SDDAKDLIRKMLTFHPSLRIT 270
Query: 231 ALEACAHPFFDELREPNARLPNGRPLPPL 259
A + HP+ +++ ++ P LP L
Sbjct: 271 ATQCLEHPW---IQKYSSETPTISDLPSL 296
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 125/264 (47%), Gaps = 43/264 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVME-YVPESMYRVLKHYSSANQRMPLIYVKL 59
++++DHPN++ L + FF K +L VME Y ++ + H N+ + +K
Sbjct: 90 LKLLDHPNIMKL-YDFFE--DKRNYYL--VMECYKGGELFDEIIHRMKFNEVDAAVIIK- 143
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ--VKICDFGSAKQLIAGEANISYI 117
Q+ G+ Y+H + HRDLKP+NLL++ +KI DFG + + +
Sbjct: 144 ---QVLSGVTYLHK-HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERL 199
Query: 118 CSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 177
+ +Y APE++ +Y D+WS G +L LL G P F G+ DQ EI++
Sbjct: 200 GTAYYIAPEVL--RKKYDEKCDVWSIGVILFILLAGYPPFGGQ--TDQ--EILR------ 247
Query: 178 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
+ YT F P+ W K + A DL ++LQ+ R +A +A H
Sbjct: 248 ----KVEKGKYT-FDSPE-----W-----KNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292
Query: 238 PFFDELREPNARLPNGRPLPPLFN 261
P+ ++E ++ +G LP L N
Sbjct: 293 PW---IKEMCSKKESGIELPSLAN 313
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 85/151 (56%), Gaps = 13/151 (8%)
Query: 5 DHPNVISLKHCFFSTTSKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQ 63
+ P ++ F+S +++ ME++ S+ +VLK +R+P + +
Sbjct: 72 NSPYIVGFYGAFYSDGE-----ISICMEHMDGGSLDQVLKEA----KRIPEEILGKVSIA 122
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYR 123
+ RGLAY+ ++ HRD+KP N+LV+ ++K+CDFG + QLI AN S++ +R Y
Sbjct: 123 VLRGLAYLREKHQIMHRDVKPSNILVNS-RGEIKLCDFGVSGQLIDSMAN-SFVGTRSYM 180
Query: 124 APELIFGATEYTTSIDIWSAGCVLAELLLGQ 154
APE + G T Y+ DIWS G L EL +G+
Sbjct: 181 APERLQG-THYSVQSDIWSMGLSLVELAVGR 210
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 122/260 (46%), Gaps = 59/260 (22%)
Query: 29 LVMEYVPESMYRVLKHYSSANQRMP--LIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQN 86
+V E + S Y +K N +P L +++ YQI + + ++H+ ++ H DLKP+N
Sbjct: 94 IVFELLGLSTYDFIK----ENGFLPFRLDHIRKMAYQICKSVNFLHS-NKLTHTDLKPEN 148
Query: 87 LL---------------------VDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAP 125
+L ++P +K+ DFGSA E + + + +R YRAP
Sbjct: 149 ILFVQSDYTEAYNPKIKRDERTLINP---DIKVVDFGSAT--YDDEHHSTLVSTRHYRAP 203
Query: 126 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG-------TPTR 178
E+I A ++ D+WS GC+L E LG +FP ++ + L + ++LG TR
Sbjct: 204 EVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTR 262
Query: 179 EEIRCMNPNYTDF-------RFPQIKAHPW------HKVFHKRMPPEAIDLASRLLQYSP 225
+ + + + D+ R+ P V H+R+ DL ++L+Y P
Sbjct: 263 KR-KYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERL----FDLIQKMLEYDP 317
Query: 226 SLRCTALEACAHPFFDELRE 245
+ R T EA HPFFD L++
Sbjct: 318 AKRITLREALKHPFFDLLKK 337
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 107/241 (44%), Gaps = 38/241 (15%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ +DHPN++ L F + F + Y ++ + ++ +K
Sbjct: 75 LKKLDHPNIMKL----FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK-- 128
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ--VKICDFGSAKQLIAGEANISYIC 118
Q+F G+ Y+H + HRDLKP+N+L++ +KI DFG + I
Sbjct: 129 --QVFSGITYMHK-HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIG 185
Query: 119 SRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 178
+ +Y APE++ G Y D+WSAG +L LL G P F G+N D I+K
Sbjct: 186 TAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYD----ILK------- 232
Query: 179 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHP 238
R Y F PQ W + + +A DL ++L + PSLR TA + HP
Sbjct: 233 ---RVETGKYA-FDLPQ-----W-----RTISDDAKDLIRKMLTFHPSLRITATQCLEHP 278
Query: 239 F 239
+
Sbjct: 279 W 279
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 107/241 (44%), Gaps = 38/241 (15%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ +DHPN++ L F + F + Y ++ + ++ +K
Sbjct: 75 LKKLDHPNIMKL----FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK-- 128
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ--VKICDFGSAKQLIAGEANISYIC 118
Q+F G+ Y+H + HRDLKP+N+L++ +KI DFG + I
Sbjct: 129 --QVFSGITYMHK-HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIG 185
Query: 119 SRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 178
+ +Y APE++ G Y D+WSAG +L LL G P F G+N D I+K
Sbjct: 186 TAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYD----ILK------- 232
Query: 179 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHP 238
R Y F PQ W + + +A DL ++L + PSLR TA + HP
Sbjct: 233 ---RVETGKYA-FDLPQ-----W-----RTISDDAKDLIRKMLTFHPSLRITATQCLEHP 278
Query: 239 F 239
+
Sbjct: 279 W 279
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 119/252 (47%), Gaps = 18/252 (7%)
Query: 1 MRVMDHPNVISLKHCFFSTTS---KNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYV 57
++++ H NV++L + S + + + LV ++ + +L S+ + L +
Sbjct: 71 LQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLL---SNVLVKFTLSEI 127
Query: 58 KLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEAN---- 113
K + GL YIH ++ HRD+K N+L+ +K+ DFG A+ + +
Sbjct: 128 KRVMQMLLNGLYYIHR-NKILHRDMKAANVLI-TRDGVLKLADFGLARAFSLAKNSQPNR 185
Query: 114 -ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV 172
+ + + +YR PEL+ G +Y ID+W AGC++AE+ P+ G QL I ++
Sbjct: 186 YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL 245
Query: 173 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMP----PEAIDLASRLLQYSPSLR 228
G+ T E ++ NY + ++ KV + P A+DL +LL P+ R
Sbjct: 246 CGSITPEVWPNVD-NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQR 304
Query: 229 CTALEACAHPFF 240
+ +A H FF
Sbjct: 305 IDSDDALNHDFF 316
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 118/254 (46%), Gaps = 22/254 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTS-----KNELFLNLVMEYVPESMYRVLKHYSSANQRMPLI 55
++++ H NV++L + S K ++L V ++ + +L S+ + L
Sbjct: 71 LQLLKHENVVNLIEICRTKASPYNRCKGSIYL--VFDFCEHDLAGLL---SNVLVKFTLS 125
Query: 56 YVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEAN-- 113
+K + GL YIH ++ HRD+K N+L+ +K+ DFG A+ + +
Sbjct: 126 EIKRVMQMLLNGLYYIHR-NKILHRDMKAANVLI-TRDGVLKLADFGLARAFSLAKNSQP 183
Query: 114 ---ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
+ + + +YR PEL+ G +Y ID+W AGC++AE+ P+ G QL I
Sbjct: 184 NRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS 243
Query: 171 KVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMP----PEAIDLASRLLQYSPS 226
++ G+ T E+ NY + ++ KV + P A+DL +LL P+
Sbjct: 244 QLCGSIT-PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPA 302
Query: 227 LRCTALEACAHPFF 240
R + +A H FF
Sbjct: 303 QRIDSDDALNHDFF 316
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 119/254 (46%), Gaps = 22/254 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTS-----KNELFLNLVMEYVPESMYRVLKHYSSANQRMPLI 55
++++ H NV++L + S K ++L V ++ + +L S+ + L
Sbjct: 71 LQLLKHENVVNLIEICRTKASPYNRCKGSIYL--VFDFCEHDLAGLL---SNVLVKFTLS 125
Query: 56 YVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEAN-- 113
+K + GL YIH ++ HRD+K N+L+ +K+ DFG A+ + +
Sbjct: 126 EIKRVMQMLLNGLYYIHR-NKILHRDMKAANVLI-TRDGVLKLADFGLARAFSLAKNSQP 183
Query: 114 ---ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
+ + + +YR PEL+ G +Y ID+W AGC++AE+ P+ G QL I
Sbjct: 184 NRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS 243
Query: 171 KVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMP----PEAIDLASRLLQYSPS 226
++ G+ T E ++ NY + ++ KV + P A+DL +LL P+
Sbjct: 244 QLCGSITPEVWPNVD-NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPA 302
Query: 227 LRCTALEACAHPFF 240
R + +A H FF
Sbjct: 303 QRIDSDDALNHDFF 316
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 119/254 (46%), Gaps = 22/254 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTS-----KNELFLNLVMEYVPESMYRVLKHYSSANQRMPLI 55
++++ H NV++L + S K ++L V ++ + +L S+ + L
Sbjct: 70 LQLLKHENVVNLIEICRTKASPYNRCKGSIYL--VFDFCEHDLAGLL---SNVLVKFTLS 124
Query: 56 YVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEAN-- 113
+K + GL YIH ++ HRD+K N+L+ +K+ DFG A+ + +
Sbjct: 125 EIKRVMQMLLNGLYYIHR-NKILHRDMKAANVLI-TRDGVLKLADFGLARAFSLAKNSQP 182
Query: 114 ---ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
+ + + +YR PEL+ G +Y ID+W AGC++AE+ P+ G QL I
Sbjct: 183 NRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS 242
Query: 171 KVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMP----PEAIDLASRLLQYSPS 226
++ G+ T E ++ NY + ++ KV + P A+DL +LL P+
Sbjct: 243 QLCGSITPEVWPNVD-NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPA 301
Query: 227 LRCTALEACAHPFF 240
R + +A H FF
Sbjct: 302 QRIDSDDALNHDFF 315
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 121/260 (46%), Gaps = 59/260 (22%)
Query: 29 LVMEYVPESMYRVLKHYSSANQRMP--LIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQN 86
+V E + S Y +K N +P L +++ YQI + + ++H+ ++ H DLKP+N
Sbjct: 94 IVFELLGLSTYDFIK----ENGFLPFRLDHIRKMAYQICKSVNFLHS-NKLTHTDLKPEN 148
Query: 87 LL---------------------VDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAP 125
+L ++P +K+ DFGSA E + + + R YRAP
Sbjct: 149 ILFVQSDYTEAYNPKIKRDERTLINP---DIKVVDFGSAT--YDDEHHSTLVXXRHYRAP 203
Query: 126 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG-------TPTR 178
E+I A ++ D+WS GC+L E LG +FP ++ + L + ++LG TR
Sbjct: 204 EVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTR 262
Query: 179 EEIRCMNPNYTDF-------RFPQIKAHPW------HKVFHKRMPPEAIDLASRLLQYSP 225
+ + + + D+ R+ P V H+R+ DL ++L+Y P
Sbjct: 263 KR-KYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERL----FDLIQKMLEYDP 317
Query: 226 SLRCTALEACAHPFFDELRE 245
+ R T EA HPFFD L++
Sbjct: 318 AKRITLREALKHPFFDLLKK 337
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 82/153 (53%), Gaps = 13/153 (8%)
Query: 12 LKHCFFSTTSKNELFLNLVMEYV--PESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLA 69
L H F + +K LF VMEY+ + MY + + + L Y +I GL
Sbjct: 80 LTHMFCTFQTKENLFF--VMEYLNGGDLMYHI-----QSCHKFDLSRATFYAAEIILGLQ 132
Query: 70 YIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR-FYRAPELI 128
++H+ + +RDLK N+L+D H +KI DFG K+ + G+A + C Y APE++
Sbjct: 133 FLHS-KGIVYRDLKLDNILLDKDGH-IKIADFGMCKENMLGDAKTNXFCGTPDYIAPEIL 190
Query: 129 FGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 161
G +Y S+D WS G +L E+L+GQ F G++
Sbjct: 191 LG-QKYNHSVDWWSFGVLLYEMLIGQSPFHGQD 222
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 82/153 (53%), Gaps = 13/153 (8%)
Query: 12 LKHCFFSTTSKNELFLNLVMEYV--PESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLA 69
L H F + +K LF VMEY+ + MY + + + L Y +I GL
Sbjct: 81 LTHMFCTFQTKENLFF--VMEYLNGGDLMYHI-----QSCHKFDLSRATFYAAEIILGLQ 133
Query: 70 YIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR-FYRAPELI 128
++H+ + +RDLK N+L+D H +KI DFG K+ + G+A + C Y APE++
Sbjct: 134 FLHS-KGIVYRDLKLDNILLDKDGH-IKIADFGMCKENMLGDAKTNEFCGTPDYIAPEIL 191
Query: 129 FGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 161
G +Y S+D WS G +L E+L+GQ F G++
Sbjct: 192 LG-QKYNHSVDWWSFGVLLYEMLIGQSPFHGQD 223
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 88/161 (54%), Gaps = 14/161 (8%)
Query: 5 DHPNVISLKHCFFSTTSKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQ 63
+ P ++ F+S +++ ME++ S+ +VLK R+P + +
Sbjct: 81 NSPYIVGFYGAFYSDGE-----ISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIA 131
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYR 123
+ +GL Y+ ++ HRD+KP N+LV+ ++K+CDFG + QLI AN S++ +R Y
Sbjct: 132 VIKGLTYLREKHKIMHRDVKPSNILVNS-RGEIKLCDFGVSGQLIDSMAN-SFVGTRSYM 189
Query: 124 APELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAV 163
+PE + G T Y+ DIWS G L E+ +G+ P+ G ++
Sbjct: 190 SPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSM 229
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 110/238 (46%), Gaps = 45/238 (18%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ L F +T + L++EY P ++YR L+ S +++ Y+
Sbjct: 65 LRHPNILRLYGYFHDSTR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 115
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
++ L+Y H+ +V HRD+KP+NLL+ ++KI DFG + + A + + +C
Sbjct: 116 ELANALSYCHS-KKVIHRDIKPENLLLGS-AGELKIADFGWS--VHAPSSRRAALCGTLD 171
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y PE+I G + +D+WS G + E L+G+P F D I +V
Sbjct: 172 YLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRV--------- 221
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+F FP + A DL SRLL+++PS R E HP+
Sbjct: 222 --------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 109/239 (45%), Gaps = 45/239 (18%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ L F T + L++EY P ++YR L+ S +++ Y+
Sbjct: 91 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 141
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
++ L+Y H+ RV HRD+KP+NLL+ ++KI DFG + + A + + +C
Sbjct: 142 ELANALSYCHS-KRVIHRDIKPENLLLGS-AGELKIADFGWS--VHAPSSRRTTLCGTLD 197
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y PE+I G + +D+WS G + E L+G+P F + I +V
Sbjct: 198 YLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 247
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
+F FP + A DL SRLL+++PS R E HP+
Sbjct: 248 --------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 83/151 (54%), Gaps = 13/151 (8%)
Query: 5 DHPNVISLKHCFFSTTSKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQ 63
+ P ++ F+S +++ ME++ S+ +VLK R+P + +
Sbjct: 124 NSPYIVGFYGAFYSDGE-----ISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIA 174
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYR 123
+ +GL Y+ ++ HRD+KP N+LV+ ++K+CDFG + QLI AN S++ +R Y
Sbjct: 175 VIKGLTYLREKHKIMHRDVKPSNILVNS-RGEIKLCDFGVSGQLIDSMAN-SFVGTRSYM 232
Query: 124 APELIFGATEYTTSIDIWSAGCVLAELLLGQ 154
+PE + G T Y+ DIWS G L E+ +G+
Sbjct: 233 SPERLQG-THYSVQSDIWSMGLSLVEMAVGR 262
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 109/239 (45%), Gaps = 45/239 (18%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ L F T + L++EY P ++YR L+ S +++ Y+
Sbjct: 82 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 132
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
++ L+Y H+ RV HRD+KP+NLL+ ++KI DFG + + A + + +C
Sbjct: 133 ELANALSYCHS-KRVIHRDIKPENLLLGS-AGELKIADFGWS--VHAPSSRRTTLCGTLD 188
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y PE+I G + +D+WS G + E L+G+P F + I +V
Sbjct: 189 YLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 238
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
+F FP + A DL SRLL+++PS R E HP+
Sbjct: 239 --------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 277
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 83/151 (54%), Gaps = 13/151 (8%)
Query: 5 DHPNVISLKHCFFSTTSKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQ 63
+ P ++ F+S +++ ME++ S+ +VLK R+P + +
Sbjct: 89 NSPYIVGFYGAFYSDGE-----ISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIA 139
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYR 123
+ +GL Y+ ++ HRD+KP N+LV+ ++K+CDFG + QLI AN S++ +R Y
Sbjct: 140 VIKGLTYLREKHKIMHRDVKPSNILVNS-RGEIKLCDFGVSGQLIDSMAN-SFVGTRSYM 197
Query: 124 APELIFGATEYTTSIDIWSAGCVLAELLLGQ 154
+PE + G T Y+ DIWS G L E+ +G+
Sbjct: 198 SPERLQG-THYSVQSDIWSMGLSLVEMAVGR 227
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 109/238 (45%), Gaps = 45/238 (18%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ L F T + L++EY P ++YR L+ S +++ Y+
Sbjct: 65 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 115
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
++ L+Y H+ RV HRD+KP+NLL+ ++KI DFG + + A + + +C
Sbjct: 116 ELANALSYCHS-KRVIHRDIKPENLLLGS-AGELKIADFGWS--VHAPSSRRTXLCGTLD 171
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y PE+I G + +D+WS G + E L+G+P F + I +V
Sbjct: 172 YLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 221
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+F FP + A DL SRLL+++PS R E HP+
Sbjct: 222 --------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 110/244 (45%), Gaps = 42/244 (17%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSA--NQRMPLIYVK 58
++ +DHPN++ L F +++ LVME +YR + + Q+ +
Sbjct: 58 LKQLDHPNIMKLYEFF-----EDKRNYYLVME-----VYRGGELFDEIILRQKFSEVDAA 107
Query: 59 LYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ--VKICDFGSAKQLIAGEANISY 116
+ Q+ G Y+H + HRDLKP+NLL++ + +KI DFG + G
Sbjct: 108 VIMKQVLSGTTYLHK-HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER 166
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + +Y APE++ +Y D+WS G +L LL G P F G+ DQ EI+K
Sbjct: 167 LGTAYYIAPEVL--RKKYDEKCDVWSCGVILYILLCGYPPFGGQ--TDQ--EILK----- 215
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 236
R ++ F P W +V EA L +L Y PS R +A EA
Sbjct: 216 -----RVEKGKFS-FDPP-----DWTQV-----SDEAKQLVKLMLTYEPSKRISAEEALN 259
Query: 237 HPFF 240
HP+
Sbjct: 260 HPWI 263
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 109/238 (45%), Gaps = 45/238 (18%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ L F T + L++EY P ++YR L+ S +++ Y+
Sbjct: 68 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 118
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
++ L+Y H+ RV HRD+KP+NLL+ ++KI DFG + + A + + +C
Sbjct: 119 ELANALSYCHS-KRVIHRDIKPENLLLGS-AGELKIADFGWS--VHAPSSRRTTLCGTLD 174
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y PE+I G + +D+WS G + E L+G+P F + I +V
Sbjct: 175 YLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 224
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+F FP + A DL SRLL+++PS R E HP+
Sbjct: 225 --------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 109/238 (45%), Gaps = 45/238 (18%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ L F T + L++EY P ++YR L+ S +++ Y+
Sbjct: 62 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 112
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
++ L+Y H+ RV HRD+KP+NLL+ ++KI DFG + + A + + +C
Sbjct: 113 ELANALSYCHS-KRVIHRDIKPENLLLGS-AGELKIADFGWS--VHAPSSRRTTLCGTLD 168
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y PE+I G + +D+WS G + E L+G+P F + I +V
Sbjct: 169 YLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 218
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+F FP + A DL SRLL+++PS R E HP+
Sbjct: 219 --------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 256
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 109/238 (45%), Gaps = 45/238 (18%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ L F T + L++EY P ++YR L+ S +++ Y+
Sbjct: 68 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 118
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
++ L+Y H+ RV HRD+KP+NLL+ ++KI DFG + + A + + +C
Sbjct: 119 ELANALSYCHS-KRVIHRDIKPENLLLGS-AGELKIADFGWS--VHAPSSRRTTLCGTLD 174
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y PE+I G + +D+WS G + E L+G+P F + I +V
Sbjct: 175 YLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 224
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+F FP + A DL SRLL+++PS R E HP+
Sbjct: 225 --------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 109/238 (45%), Gaps = 45/238 (18%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ L F T + L++EY P ++YR L+ S +++ Y+
Sbjct: 65 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 115
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
++ L+Y H+ RV HRD+KP+NLL+ ++KI DFG + + A + + +C
Sbjct: 116 ELANALSYCHS-KRVIHRDIKPENLLLGS-AGELKIADFGWS--VHAPSSRRTTLCGTLD 171
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y PE+I G + +D+WS G + E L+G+P F + I +V
Sbjct: 172 YLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 221
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+F FP + A DL SRLL+++PS R E HP+
Sbjct: 222 --------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 109/238 (45%), Gaps = 45/238 (18%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ L F T + L++EY P ++YR L+ S +++ Y+
Sbjct: 64 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 114
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
++ L+Y H+ RV HRD+KP+NLL+ ++KI DFG + + A + + +C
Sbjct: 115 ELANALSYCHS-KRVIHRDIKPENLLLGS-AGELKIADFGWS--VHAPSSRRTTLCGTLD 170
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y PE+I G + +D+WS G + E L+G+P F + I +V
Sbjct: 171 YLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 220
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+F FP + A DL SRLL+++PS R E HP+
Sbjct: 221 --------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 258
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 109/238 (45%), Gaps = 45/238 (18%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ L F T + L++EY P ++YR L+ S +++ Y+
Sbjct: 69 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 119
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
++ L+Y H+ RV HRD+KP+NLL+ ++KI DFG + + A + + +C
Sbjct: 120 ELANALSYCHS-KRVIHRDIKPENLLLGS-AGELKIADFGWS--VHAPSSRRTTLCGTLD 175
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y PE+I G + +D+WS G + E L+G+P F + I +V
Sbjct: 176 YLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 225
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+F FP + A DL SRLL+++PS R E HP+
Sbjct: 226 --------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 263
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 109/238 (45%), Gaps = 45/238 (18%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ L F T + L++EY P ++YR L+ S +++ Y+
Sbjct: 65 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 115
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
++ L+Y H+ RV HRD+KP+NLL+ ++KI DFG + + A + + +C
Sbjct: 116 ELANALSYCHS-KRVIHRDIKPENLLLGS-AGELKIADFGWS--VHAPSSRRTELCGTLD 171
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y PE+I G + +D+WS G + E L+G+P F + I +V
Sbjct: 172 YLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 221
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+F FP + A DL SRLL+++PS R E HP+
Sbjct: 222 --------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 109/238 (45%), Gaps = 45/238 (18%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ L F T + L++EY P ++YR L+ S +++ Y+
Sbjct: 70 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 120
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
++ L+Y H+ RV HRD+KP+NLL+ ++KI DFG + + A + + +C
Sbjct: 121 ELANALSYCHS-KRVIHRDIKPENLLLGS-AGELKIADFGWS--VHAPSSRRTTLCGTLD 176
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y PE+I G + +D+WS G + E L+G+P F + I +V
Sbjct: 177 YLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 226
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+F FP + A DL SRLL+++PS R E HP+
Sbjct: 227 --------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 83/151 (54%), Gaps = 13/151 (8%)
Query: 5 DHPNVISLKHCFFSTTSKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQ 63
+ P ++ F+S +++ ME++ S+ +VLK R+P + +
Sbjct: 62 NSPYIVGFYGAFYSDGE-----ISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIA 112
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYR 123
+ +GL Y+ ++ HRD+KP N+LV+ ++K+CDFG + QLI AN S++ +R Y
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNS-RGEIKLCDFGVSGQLIDSMAN-SFVGTRSYM 170
Query: 124 APELIFGATEYTTSIDIWSAGCVLAELLLGQ 154
+PE + G T Y+ DIWS G L E+ +G+
Sbjct: 171 SPERLQG-THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 109/238 (45%), Gaps = 45/238 (18%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ L F T + L++EY P ++YR L+ S +++ Y+
Sbjct: 65 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 115
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
++ L+Y H+ RV HRD+KP+NLL+ ++KI DFG + + A + + +C
Sbjct: 116 ELANALSYCHS-KRVIHRDIKPENLLLGS-AGELKIADFGWS--VHAPSSRRAALCGTLD 171
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y PE+I G + +D+WS G + E L+G+P F + I +V
Sbjct: 172 YLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 221
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+F FP + A DL SRLL+++PS R E HP+
Sbjct: 222 --------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 110/244 (45%), Gaps = 42/244 (17%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSA--NQRMPLIYVK 58
++ +DHPN++ L F +++ LVME +YR + + Q+ +
Sbjct: 75 LKQLDHPNIMKLYEFF-----EDKRNYYLVME-----VYRGGELFDEIILRQKFSEVDAA 124
Query: 59 LYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ--VKICDFGSAKQLIAGEANISY 116
+ Q+ G Y+H + HRDLKP+NLL++ + +KI DFG + G
Sbjct: 125 VIMKQVLSGTTYLHK-HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER 183
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + +Y APE++ +Y D+WS G +L LL G P F G+ DQ EI+K
Sbjct: 184 LGTAYYIAPEVL--RKKYDEKCDVWSCGVILYILLCGYPPFGGQT--DQ--EILK----- 232
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 236
R ++ F P W +V EA L +L Y PS R +A EA
Sbjct: 233 -----RVEKGKFS-FDPPD-----WTQV-----SDEAKQLVKLMLTYEPSKRISAEEALN 276
Query: 237 HPFF 240
HP+
Sbjct: 277 HPWI 280
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 109/238 (45%), Gaps = 45/238 (18%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ L F T + L++EY P ++YR L+ S +++ Y+
Sbjct: 70 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 120
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
++ L+Y H+ RV HRD+KP+NLL+ ++KI DFG + + A + + +C
Sbjct: 121 ELANALSYCHS-KRVIHRDIKPENLLLGS-AGELKIADFGWS--VHAPSSRRTDLCGTLD 176
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y PE+I G + +D+WS G + E L+G+P F + I +V
Sbjct: 177 YLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 226
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+F FP + A DL SRLL+++PS R E HP+
Sbjct: 227 --------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 83/151 (54%), Gaps = 13/151 (8%)
Query: 5 DHPNVISLKHCFFSTTSKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQ 63
+ P ++ F+S +++ ME++ S+ +VLK R+P + +
Sbjct: 62 NSPYIVGFYGAFYSDGE-----ISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIA 112
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYR 123
+ +GL Y+ ++ HRD+KP N+LV+ ++K+CDFG + QLI AN S++ +R Y
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNS-RGEIKLCDFGVSGQLIDSMAN-SFVGTRSYM 170
Query: 124 APELIFGATEYTTSIDIWSAGCVLAELLLGQ 154
+PE + G T Y+ DIWS G L E+ +G+
Sbjct: 171 SPERLQG-THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 109/238 (45%), Gaps = 45/238 (18%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ L F T + L++EY P ++YR L+ S +++ Y+
Sbjct: 65 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 115
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
++ L+Y H+ RV HRD+KP+NLL+ ++KI DFG + + A + + +C
Sbjct: 116 ELANALSYCHS-KRVIHRDIKPENLLLGS-AGELKIADFGWS--VHAPSSRRTDLCGTLD 171
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y PE+I G + +D+WS G + E L+G+P F + I +V
Sbjct: 172 YLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 221
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+F FP + A DL SRLL+++PS R E HP+
Sbjct: 222 --------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 109/238 (45%), Gaps = 45/238 (18%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ L F T + L++EY P ++YR L+ S +++ Y+
Sbjct: 68 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 118
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
++ L+Y H+ RV HRD+KP+NLL+ ++KI DFG + + A + + +C
Sbjct: 119 ELANALSYCHS-KRVIHRDIKPENLLLGS-AGELKIADFGWS--VHAPSSRRAALCGTLD 174
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y PE+I G + +D+WS G + E L+G+P F + I +V
Sbjct: 175 YLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 224
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+F FP + A DL SRLL+++PS R E HP+
Sbjct: 225 --------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 83/151 (54%), Gaps = 13/151 (8%)
Query: 5 DHPNVISLKHCFFSTTSKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQ 63
+ P ++ F+S +++ ME++ S+ +VLK R+P + +
Sbjct: 62 NSPYIVGFYGAFYSDGE-----ISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIA 112
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYR 123
+ +GL Y+ ++ HRD+KP N+LV+ ++K+CDFG + QLI AN S++ +R Y
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNS-RGEIKLCDFGVSGQLIDSMAN-SFVGTRSYM 170
Query: 124 APELIFGATEYTTSIDIWSAGCVLAELLLGQ 154
+PE + G T Y+ DIWS G L E+ +G+
Sbjct: 171 SPERLQG-THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 108/239 (45%), Gaps = 45/239 (18%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ L F T + L++EY P ++YR L+ S +++ Y+
Sbjct: 91 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 141
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
++ L+Y H+ RV HRD+KP+NLL+ ++KI DFG + + A + +C
Sbjct: 142 ELANALSYCHS-KRVIHRDIKPENLLLGS-AGELKIADFGWS--VHAPSSRRDDLCGTLD 197
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y PE+I G + +D+WS G + E L+G+P F + I +V
Sbjct: 198 YLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 247
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
+F FP + A DL SRLL+++PS R E HP+
Sbjct: 248 --------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 109/238 (45%), Gaps = 45/238 (18%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ L F T + L++EY P ++YR L+ S +++ Y+
Sbjct: 66 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 116
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
++ L+Y H+ RV HRD+KP+NLL+ ++KI DFG + + A + + +C
Sbjct: 117 ELANALSYCHS-KRVIHRDIKPENLLLGS-AGELKIADFGWS--VHAPSSRRTDLCGTLD 172
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y PE+I G + +D+WS G + E L+G+P F + I +V
Sbjct: 173 YLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 222
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+F FP + A DL SRLL+++PS R E HP+
Sbjct: 223 --------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 83/151 (54%), Gaps = 13/151 (8%)
Query: 5 DHPNVISLKHCFFSTTSKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQ 63
+ P ++ F+S +++ ME++ S+ +VLK R+P + +
Sbjct: 62 NSPYIVGFYGAFYSDGE-----ISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIA 112
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYR 123
+ +GL Y+ ++ HRD+KP N+LV+ ++K+CDFG + QLI AN S++ +R Y
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNS-RGEIKLCDFGVSGQLIDSMAN-SFVGTRSYM 170
Query: 124 APELIFGATEYTTSIDIWSAGCVLAELLLGQ 154
+PE + G T Y+ DIWS G L E+ +G+
Sbjct: 171 SPERLQG-THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 83/151 (54%), Gaps = 13/151 (8%)
Query: 5 DHPNVISLKHCFFSTTSKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQ 63
+ P ++ F+S +++ ME++ S+ +VLK R+P + +
Sbjct: 62 NSPYIVGFYGAFYSDGE-----ISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIA 112
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYR 123
+ +GL Y+ ++ HRD+KP N+LV+ ++K+CDFG + QLI AN S++ +R Y
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNS-RGEIKLCDFGVSGQLIDSMAN-SFVGTRSYM 170
Query: 124 APELIFGATEYTTSIDIWSAGCVLAELLLGQ 154
+PE + G T Y+ DIWS G L E+ +G+
Sbjct: 171 SPERLQG-THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 108/238 (45%), Gaps = 45/238 (18%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ L F T + L++EY P ++YR L+ S +++ Y+
Sbjct: 66 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 116
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
++ L+Y H+ RV HRD+KP+NLL+ ++KI DFG + + A + +C
Sbjct: 117 ELANALSYCHS-KRVIHRDIKPENLLLGS-AGELKIADFGWS--VHAPSSRRDTLCGTLD 172
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y PE+I G + +D+WS G + E L+G+P F + I +V
Sbjct: 173 YLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 222
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+F FP + A DL SRLL+++PS R E HP+
Sbjct: 223 --------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 108/238 (45%), Gaps = 45/238 (18%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ L F T + L++EY P ++YR L+ S +++ Y+
Sbjct: 68 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 118
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
++ L+Y H+ RV HRD+KP+NLL+ ++KI DFG + + A + +C
Sbjct: 119 ELANALSYCHS-KRVIHRDIKPENLLLGS-AGELKIADFGWS--VHAPSSRRXXLCGTLD 174
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y PE+I G + +D+WS G + E L+G+P F + I +V
Sbjct: 175 YLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 224
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+F FP + A DL SRLL+++PS R E HP+
Sbjct: 225 --------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 108/238 (45%), Gaps = 45/238 (18%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ L F T + L++EY P ++YR L+ S +++ Y+
Sbjct: 67 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 117
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
++ L+Y H+ RV HRD+KP+NLL+ ++KI DFG + + A + +C
Sbjct: 118 ELANALSYCHS-KRVIHRDIKPENLLLGS-AGELKIADFGWS--VHAPSSRRXXLCGTLD 173
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y PE+I G + +D+WS G + E L+G+P F + I +V
Sbjct: 174 YLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 223
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+F FP + A DL SRLL+++PS R E HP+
Sbjct: 224 --------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 261
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 109/238 (45%), Gaps = 45/238 (18%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ L F T + L++EY P ++YR L+ S +++ Y+
Sbjct: 65 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 115
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
++ L+Y H+ RV HRD+KP+NLL+ ++KI DFG + + A + + +C
Sbjct: 116 ELANALSYCHS-KRVIHRDIKPENLLLGS-AGELKIADFGWS--VHAPSSRRTDLCGTLD 171
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y PE+I G + +D+WS G + E L+G+P F + I +V
Sbjct: 172 YLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 221
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+F FP + A DL SRLL+++PS R E HP+
Sbjct: 222 --------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 108/238 (45%), Gaps = 45/238 (18%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ L F T + L++EY P ++YR L+ S +++ Y+
Sbjct: 69 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSRFDEQRTATYIT---- 119
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
++ L+Y H+ RV HRD+KP+NLL+ ++KI DFG + + A + + +C
Sbjct: 120 ELANALSYCHS-KRVIHRDIKPENLLLGS-NGELKIADFGWS--VHAPSSRRTTLCGTLD 175
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y PE+I G + +D+WS G + E L+G P F + I +V
Sbjct: 176 YLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV--------- 225
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+F FP + A DL SRLL+++ S R T E HP+
Sbjct: 226 --------EFTFPDF------------VTEGARDLISRLLKHNASQRLTLAEVLEHPW 263
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 108/238 (45%), Gaps = 45/238 (18%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ L F T + L++EY P ++YR L+ S +++ Y+
Sbjct: 65 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 115
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
++ L+Y H+ RV HRD+KP+NLL+ ++KI DFG + + A + +C
Sbjct: 116 ELANALSYCHS-KRVIHRDIKPENLLLGS-AGELKIADFGWS--VHAPSSRRXXLCGTLD 171
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y PE+I G + +D+WS G + E L+G+P F + I +V
Sbjct: 172 YLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 221
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+F FP + A DL SRLL+++PS R E HP+
Sbjct: 222 --------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 108/238 (45%), Gaps = 45/238 (18%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ L F T + L++EY P ++YR L+ S +++ Y+
Sbjct: 70 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 120
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
++ L+Y H+ RV HRD+KP+NLL+ ++KI DFG + + A + + +C
Sbjct: 121 ELANALSYCHS-KRVIHRDIKPENLLLGS-AGELKIADFGWS--VHAPSSRRTTLCGTLD 176
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y PE I G + +D+WS G + E L+G+P F + I +V
Sbjct: 177 YLPPEXIEGRX-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 226
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+F FP + A DL SRLL+++PS R E HP+
Sbjct: 227 --------EFTFPDF------------VTEGARDLISRLLKHNPSQRPXLREVLEHPW 264
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 108/238 (45%), Gaps = 45/238 (18%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ L F T + L++EY P +Y+ L+ S +++ Y+
Sbjct: 70 LRHPNILRLYGYFHDATR-----VYLILEYAPRGEVYKELQKLSKFDEQRTATYIT---- 120
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
++ L+Y H+ RV HRD+KP+NLL+ ++KI DFG + + A + + +C
Sbjct: 121 ELANALSYCHS-KRVIHRDIKPENLLLGS-AGELKIADFGWS--VHAPSSRRTTLCGTLD 176
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y PE+I G + +D+WS G + E L+G+P F + I +V
Sbjct: 177 YLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 226
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+F FP + A DL SRLL+++PS R E HP+
Sbjct: 227 --------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 107/238 (44%), Gaps = 45/238 (18%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ L F T + L++EY P ++YR L+ S +++ Y+
Sbjct: 69 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSRFDEQRTATYIT---- 119
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
++ L+Y H+ RV HRD+KP+NLL+ ++KI DFG + + A + +C
Sbjct: 120 ELANALSYCHS-KRVIHRDIKPENLLLGS-NGELKIADFGWS--VHAPSSRRDTLCGTLD 175
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y PE+I G + +D+WS G + E L+G P F + I +V
Sbjct: 176 YLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV--------- 225
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+F FP + A DL SRLL+++ S R T E HP+
Sbjct: 226 --------EFTFPDF------------VTEGARDLISRLLKHNASQRLTLAEVLEHPW 263
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 108/238 (45%), Gaps = 45/238 (18%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ L F T + L++EY P ++YR L+ S +++ Y+
Sbjct: 68 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 118
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
++ L+Y H+ RV HRD+KP+NLL+ ++KI DFG + + A + +C
Sbjct: 119 ELANALSYCHS-KRVIHRDIKPENLLLGS-AGELKIADFGWS--VHAPSSRRDDLCGTLD 174
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y PE+I G + +D+WS G + E L+G+P F + I +V
Sbjct: 175 YLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 224
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+F FP + A DL SRLL+++PS R E HP+
Sbjct: 225 --------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 109/253 (43%), Gaps = 56/253 (22%)
Query: 1 MRVMDHPNVISLKHCFFSTT---------SKNELFLNLVMEYVPESMYRVLKHYSSANQR 51
M+ +DHPN+I L F T + ELF +V + RV + +A
Sbjct: 77 MKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHK-------RVFRESDAAR-- 127
Query: 52 MPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLL--VDPLTHQVKICDFGSAKQLIA 109
+ +AY H + V HRDLKP+N L D +K+ DFG A +
Sbjct: 128 --------IMKDVLSAVAYCHKL-NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 178
Query: 110 GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEI 169
G+ + + + +Y +P+++ G Y D WSAG ++ LL G P F + +++I
Sbjct: 179 GKMMRTKVGTPYYVSPQVLEGL--YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKI 236
Query: 170 IKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC 229
+ GT F FP+ W V P+A L RLL SP R
Sbjct: 237 RE--GT---------------FTFPE---KDWLNV-----SPQAESLIRRLLTKSPKQRI 271
Query: 230 TALEACAHPFFDE 242
T+L+A H +F++
Sbjct: 272 TSLQALEHEWFEK 284
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 109/238 (45%), Gaps = 45/238 (18%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ L F T + L++EY P ++YR L+ S +++ Y+
Sbjct: 68 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 118
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
++ L+Y H+ RV HRD+KP+NLL+ ++KI +FG + + A + + +C
Sbjct: 119 ELANALSYCHS-KRVIHRDIKPENLLLGS-AGELKIANFGWS--VHAPSSRRTTLCGTLD 174
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y PE+I G + +D+WS G + E L+G+P F + I +V
Sbjct: 175 YLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 224
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+F FP + A DL SRLL+++PS R E HP+
Sbjct: 225 --------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 109/253 (43%), Gaps = 56/253 (22%)
Query: 1 MRVMDHPNVISLKHCFFSTT---------SKNELFLNLVMEYVPESMYRVLKHYSSANQR 51
M+ +DHPN+I L F T + ELF +V + RV + +A
Sbjct: 60 MKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHK-------RVFRESDAAR-- 110
Query: 52 MPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLL--VDPLTHQVKICDFGSAKQLIA 109
+ +AY H + V HRDLKP+N L D +K+ DFG A +
Sbjct: 111 --------IMKDVLSAVAYCHKL-NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 161
Query: 110 GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEI 169
G+ + + + +Y +P+++ G Y D WSAG ++ LL G P F + +++I
Sbjct: 162 GKMMRTKVGTPYYVSPQVLEGL--YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKI 219
Query: 170 IKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC 229
+ GT F FP+ W V P+A L RLL SP R
Sbjct: 220 RE--GT---------------FTFPE---KDWLNV-----SPQAESLIRRLLTKSPKQRI 254
Query: 230 TALEACAHPFFDE 242
T+L+A H +F++
Sbjct: 255 TSLQALEHEWFEK 267
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 109/238 (45%), Gaps = 45/238 (18%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ L F T + L++EY P ++YR L+ S +++ Y+
Sbjct: 67 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 117
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
++ L+Y H+ RV HRD+KP+NLL+ ++KI +FG + + A + + +C
Sbjct: 118 ELANALSYCHS-KRVIHRDIKPENLLLGS-AGELKIANFGWS--VHAPSSRRTTLCGTLD 173
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y PE+I G + +D+WS G + E L+G+P F + I +V
Sbjct: 174 YLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 223
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
+F FP + A DL SRLL+++PS R E HP+
Sbjct: 224 --------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 261
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 108/244 (44%), Gaps = 57/244 (23%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ L F T + L++EY P ++YR L+ S +++ Y+
Sbjct: 66 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 116
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG-------SAKQLIAGEANIS 115
++ L+Y H+ RV HRD+KP+NLL+ ++KI DFG S + ++G +
Sbjct: 117 ELANALSYCHS-KRVIHRDIKPENLLLGS-AGELKIADFGWSCHAPSSRRTTLSGTLD-- 172
Query: 116 YICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 175
Y PE+I G + +D+WS G + E L+G+P F + I +V
Sbjct: 173 ------YLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--- 222
Query: 176 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
+F FP + A DL SRLL+++PS R E
Sbjct: 223 --------------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVL 256
Query: 236 AHPF 239
HP+
Sbjct: 257 EHPW 260
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQ 63
+ H N++ + + S+N F+ + ME VP L + + YT Q
Sbjct: 76 LKHKNIVQ----YLGSFSENG-FIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ 130
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA-GEANISYICSRFY 122
I GL Y+H ++ HRD+K N+L++ + +KI DFG++K+L ++ + Y
Sbjct: 131 ILEGLKYLHD-NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQY 189
Query: 123 RAPELI-FGATEYTTSIDIWSAGCVLAELLLGQPLF 157
APE+I G Y + DIWS GC + E+ G+P F
Sbjct: 190 MAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQ 63
+ H N++ + + S+N F+ + ME VP L + + YT Q
Sbjct: 62 LKHKNIVQ----YLGSFSENG-FIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ 116
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA-GEANISYICSRFY 122
I GL Y+H ++ HRD+K N+L++ + +KI DFG++K+L ++ + Y
Sbjct: 117 ILEGLKYLHD-NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQY 175
Query: 123 RAPELIF-GATEYTTSIDIWSAGCVLAELLLGQPLF 157
APE+I G Y + DIWS GC + E+ G+P F
Sbjct: 176 MAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M++++HPN++ L + E L L+MEY + Y A+ RM +
Sbjct: 65 MKILNHPNIVKLFEVI-----ETEKTLYLIMEYASGGE---VFDYLVAHGRMKEKEARSK 116
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI + Y H R+ HRDLK +NLL+D +KI DFG + + G ++ S
Sbjct: 117 FRQIVSAVQYCHQ-KRIVHRDLKAENLLLDA-DMNIKIADFGFSNEFTVGGKLDTFCGSP 174
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 161
Y APEL G +D+WS G +L L+ G F G+N
Sbjct: 175 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 215
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 82/151 (54%), Gaps = 13/151 (8%)
Query: 5 DHPNVISLKHCFFSTTSKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQ 63
+ P ++ F+S +++ ME++ S+ +VLK R+P + +
Sbjct: 65 NSPYIVGFYGAFYSDGE-----ISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIA 115
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYR 123
+ +GL Y+ ++ HRD+KP N+LV+ ++K+CDFG + QLI AN ++ +R Y
Sbjct: 116 VIKGLTYLREKHKIMHRDVKPSNILVNS-RGEIKLCDFGVSGQLIDEMAN-EFVGTRSYM 173
Query: 124 APELIFGATEYTTSIDIWSAGCVLAELLLGQ 154
+PE + G T Y+ DIWS G L E+ +G+
Sbjct: 174 SPERLQG-THYSVQSDIWSMGLSLVEMAVGR 203
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 112/248 (45%), Gaps = 42/248 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HP +I +K+ F + ++ L + E +V+ N+R+ KLY
Sbjct: 75 LKKLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVV-----GNKRLKEATCKLY 125
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ--VKICDFGSAKQLIAGEANI-SYI 117
YQ+ + Y+H + HRDLKP+N+L+ +KI DFG +K I GE ++ +
Sbjct: 126 FYQMLLAVQYLHE-NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMRTL 182
Query: 118 CSR-FYRAPELIF--GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG 174
C Y APE++ G Y ++D WS G +L L G P F L
Sbjct: 183 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-------- 234
Query: 175 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEA 234
+++I N+ P++ W +V K A+DL +LL P R T EA
Sbjct: 235 ---KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEA 278
Query: 235 CAHPFFDE 242
HP+ +
Sbjct: 279 LRHPWLQD 286
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 112/248 (45%), Gaps = 42/248 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HP +I +K+ F + ++ L + E +V+ N+R+ KLY
Sbjct: 69 LKKLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVV-----GNKRLKEATCKLY 119
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ--VKICDFGSAKQLIAGEANI-SYI 117
YQ+ + Y+H + HRDLKP+N+L+ +KI DFG +K I GE ++ +
Sbjct: 120 FYQMLLAVQYLHE-NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMRTL 176
Query: 118 CSR-FYRAPELIF--GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG 174
C Y APE++ G Y ++D WS G +L L G P F L
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-------- 228
Query: 175 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEA 234
+++I N+ P++ W +V K A+DL +LL P R T EA
Sbjct: 229 ---KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEA 272
Query: 235 CAHPFFDE 242
HP+ +
Sbjct: 273 LRHPWLQD 280
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 112/248 (45%), Gaps = 42/248 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HP +I +K+ F + ++ L + E +V+ N+R+ KLY
Sbjct: 69 LKKLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVV-----GNKRLKEATCKLY 119
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ--VKICDFGSAKQLIAGEANI-SYI 117
YQ+ + Y+H + HRDLKP+N+L+ +KI DFG +K I GE ++ +
Sbjct: 120 FYQMLLAVQYLHE-NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMRTL 176
Query: 118 CSR-FYRAPELIF--GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG 174
C Y APE++ G Y ++D WS G +L L G P F L
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-------- 228
Query: 175 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEA 234
+++I N+ P++ W +V K A+DL +LL P R T EA
Sbjct: 229 ---KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEA 272
Query: 235 CAHPFFDE 242
HP+ +
Sbjct: 273 LRHPWLQD 280
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 112/248 (45%), Gaps = 42/248 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HP +I +K+ F + ++ L + E +V+ N+R+ KLY
Sbjct: 69 LKKLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVV-----GNKRLKEATCKLY 119
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ--VKICDFGSAKQLIAGEANI-SYI 117
YQ+ + Y+H + HRDLKP+N+L+ +KI DFG +K I GE ++ +
Sbjct: 120 FYQMLLAVQYLHE-NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMRTL 176
Query: 118 CSR-FYRAPELIF--GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG 174
C Y APE++ G Y ++D WS G +L L G P F L
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-------- 228
Query: 175 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEA 234
+++I N+ P++ W +V K A+DL +LL P R T EA
Sbjct: 229 ---KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEA 272
Query: 235 CAHPFFDE 242
HP+ +
Sbjct: 273 LRHPWLQD 280
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 112/248 (45%), Gaps = 42/248 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HP +I +K+ F + ++ L + E +V+ N+R+ KLY
Sbjct: 68 LKKLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVV-----GNKRLKEATCKLY 118
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ--VKICDFGSAKQLIAGEANI-SYI 117
YQ+ + Y+H + HRDLKP+N+L+ +KI DFG +K I GE ++ +
Sbjct: 119 FYQMLLAVQYLHE-NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMRTL 175
Query: 118 CSR-FYRAPELIF--GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG 174
C Y APE++ G Y ++D WS G +L L G P F L
Sbjct: 176 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-------- 227
Query: 175 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEA 234
+++I N+ P++ W +V K A+DL +LL P R T EA
Sbjct: 228 ---KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEA 271
Query: 235 CAHPFFDE 242
HP+ +
Sbjct: 272 LRHPWLQD 279
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 51/257 (19%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +DHP + L +F+ +L+ L E + + ++ S ++ + Y
Sbjct: 83 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE-LLKYIRKIGSFDETC----TRFY 134
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI----AGEANISY 116
T +I L Y+H + HRDLKP+N+L++ H ++I DFG+AK L AN S+
Sbjct: 135 TAEIVSALEYLHG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-SF 191
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + Y +PEL+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 192 VGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL---- 246
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEA 234
++ FP+ + P+A DL +LL + R C +E
Sbjct: 247 -------------EYDFPE------------KFFPKARDLVEKLLVLDATKRLGCEEMEG 281
Query: 235 C----AHPFFDELREPN 247
AHPFF+ + N
Sbjct: 282 YGPLKAHPFFESVTWEN 298
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 107/251 (42%), Gaps = 50/251 (19%)
Query: 2 RVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKLY 60
+V HPN+I LK + + T F LV + + + ++ L + +++
Sbjct: 79 KVSGHPNIIQLKDTYETNT-----FFFLVFDLMKKGELFDYLTEKVTLSEKE-------- 125
Query: 61 TYQIFRGLAYI----HTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISY 116
T +I R L + H + + HRDLKP+N+L+D +K+ DFG + QL GE S
Sbjct: 126 TRKIMRALLEVICALHKL-NIVHRDLKPENILLDD-DMNIKLTDFGFSCQLDPGEKLRSV 183
Query: 117 ICSRFYRAPELIFGATE-----YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIK 171
+ Y APE+I + Y +D+WS G ++ LL G P F + L I
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMI-- 241
Query: 172 VLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 231
M+ NY Q + W DL SR L P R TA
Sbjct: 242 ------------MSGNY------QFGSPEWDD-----YSDTVKDLVSRFLVVQPQKRYTA 278
Query: 232 LEACAHPFFDE 242
EA AHPFF +
Sbjct: 279 EEALAHPFFQQ 289
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 118/257 (45%), Gaps = 51/257 (19%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +DHP + L +F+ +L+ L E + + ++ S ++ + Y
Sbjct: 87 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE-LLKYIRKIGSFDETC----TRFY 138
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI----AGEANISY 116
T +I L Y+H + HRDLKP+N+L++ H ++I DFG+AK L AN S+
Sbjct: 139 TAEIVSALEYLHG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-SF 195
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + Y +PEL+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 196 VGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL---- 250
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEA 234
++ FP+ K F P+A DL +LL + R C +E
Sbjct: 251 -------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEG 285
Query: 235 C----AHPFFDELREPN 247
AHPFF+ + N
Sbjct: 286 YGPLKAHPFFESVTWEN 302
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 112/248 (45%), Gaps = 42/248 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HP +I +K+ F + ++ L + E +V+ N+R+ KLY
Sbjct: 208 LKKLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVV-----GNKRLKEATCKLY 258
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ--VKICDFGSAKQLIAGEANI-SYI 117
YQ+ + Y+H + HRDLKP+N+L+ +KI DFG +K I GE ++ +
Sbjct: 259 FYQMLLAVQYLHE-NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMRTL 315
Query: 118 CSR-FYRAPELIF--GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG 174
C Y APE++ G Y ++D WS G +L L G P F L
Sbjct: 316 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-------- 367
Query: 175 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEA 234
+++I N+ P++ W +V K A+DL +LL P R T EA
Sbjct: 368 ---KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEA 411
Query: 235 CAHPFFDE 242
HP+ +
Sbjct: 412 LRHPWLQD 419
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M++++HPN++ L + E L L+MEY + Y A+ RM +
Sbjct: 68 MKILNHPNIVKLFEVI-----ETEKTLYLIMEYASGGE---VFDYLVAHGRMKEKEARSK 119
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI + Y H R+ HRDLK +NLL+D +KI DFG + + G ++ +
Sbjct: 120 FRQIVSAVQYCHQ-KRIVHRDLKAENLLLDA-DMNIKIADFGFSNEFTVGGKLDAFCGAP 177
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 161
Y APEL G +D+WS G +L L+ G F G+N
Sbjct: 178 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 112/248 (45%), Gaps = 42/248 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ ++HP +I +K+ F + ++ L + E +V+ N+R+ KLY
Sbjct: 194 LKKLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVV-----GNKRLKEATCKLY 244
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ--VKICDFGSAKQLIAGEANI-SYI 117
YQ+ + Y+H + HRDLKP+N+L+ +KI DFG +K I GE ++ +
Sbjct: 245 FYQMLLAVQYLHE-NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMRTL 301
Query: 118 CSR-FYRAPELIF--GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG 174
C Y APE++ G Y ++D WS G +L L G P F L
Sbjct: 302 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-------- 353
Query: 175 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEA 234
+++I N+ P++ W +V K A+DL +LL P R T EA
Sbjct: 354 ---KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEA 397
Query: 235 CAHPFFDE 242
HP+ +
Sbjct: 398 LRHPWLQD 405
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 102/243 (41%), Gaps = 35/243 (14%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
MR +D P ++ F E + + ME + S+ + K Q +P +
Sbjct: 104 MRTVDCPFTVTFYGALF-----REGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKI 158
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
I + L ++H+ V HRD+KP N+L++ L QVK+CDFG + L+ A +
Sbjct: 159 AVSIVKALEHLHSKLSVIHRDVKPSNVLINAL-GQVKMCDFGISGYLVDSVAKTIDAGCK 217
Query: 121 FYRAPELI---FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 177
Y APE I Y+ DIWS G + EL + + FP ++ GTP
Sbjct: 218 PYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR--FPYDS-----------WGTPF 264
Query: 178 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
++ Q+ P ++ + E +D S+ L+ + R T E H
Sbjct: 265 QQ-------------LKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311
Query: 238 PFF 240
PFF
Sbjct: 312 PFF 314
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 116/257 (45%), Gaps = 51/257 (19%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +DHP + L CF +L+ L E + + ++ S ++ + Y
Sbjct: 91 MSRLDHPFFVKLYFCF---QDDEKLYFGLSYAKNGE-LLKYIRKIGSFDETC----TRFY 142
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI----AGEANISY 116
T +I L Y+H + HRDLKP+N+L++ H ++I DFG+AK L AN +
Sbjct: 143 TAEIVSALEYLHG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XF 199
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + Y +PEL+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 200 VGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL---- 254
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEA 234
++ FP+ K F P+A DL +LL + R C +E
Sbjct: 255 -------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEG 289
Query: 235 C----AHPFFDELREPN 247
AHPFF+ + N
Sbjct: 290 YGPLKAHPFFESVTWEN 306
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 117/257 (45%), Gaps = 51/257 (19%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +DHP + L +F+ +L+ L E + + ++ S ++ + Y
Sbjct: 86 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE-LLKYIRKIGSFDETC----TRFY 137
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI----AGEANISY 116
T +I L Y+H + HRDLKP+N+L++ H ++I DFG+AK L AN +
Sbjct: 138 TAEIVSALEYLHG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XF 194
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + Y +PEL+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 195 VGTAQYVSPELLTEKSAXKSS-DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL---- 249
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEA 234
++ FP+ K F P+A DL +LL + R C +E
Sbjct: 250 -------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEG 284
Query: 235 C----AHPFFDELREPN 247
AHPFF+ + N
Sbjct: 285 YGPLKAHPFFESVTWEN 301
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 123/261 (47%), Gaps = 57/261 (21%)
Query: 5 DHPNVISLKHCFFSTTSKNELFL-----NLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
DHPNVI + S T+ L++ NL ++ + ES K+ S N ++ Y +
Sbjct: 85 DHPNVI---RYYCSETTDRFLYIALELCNLNLQDLVES-----KNVSDENLKLQKEYNPI 136
Query: 60 YTY-QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTH------------QVKICDFGSAKQ 106
QI G+A++H++ ++ HRDLKPQN+LV + ++ I DFG K+
Sbjct: 137 SLLRQIASGVAHLHSL-KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 195
Query: 107 LIAGEANISY-----ICSRFYRAPELIFGATE--YTTSIDIWSAGCVLAELLLGQPLFPG 159
L +G+ + +RAPEL+ +T+ T SIDI+S GCV +L + P
Sbjct: 196 LDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFY-YILSKGKHPF 254
Query: 160 ENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASR 219
+ + II+ G + +E++C++ + + EA DL S+
Sbjct: 255 GDKYSRESNIIR--GIFSLDEMKCLH--------------------DRSLIAEATDLISQ 292
Query: 220 LLQYSPSLRCTALEACAHPFF 240
++ + P R TA++ HP F
Sbjct: 293 MIDHDPLKRPTAMKVLRHPLF 313
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M++++HPN++ L + E L LVMEY + Y A+ RM +
Sbjct: 68 MKILNHPNIVKLFEVI-----ETEKTLYLVMEYASGGE---VFDYLVAHGRMKEKEARAK 119
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI + Y H + HRDLK +NLL+D +KI DFG + + G ++ S
Sbjct: 120 FRQIVSAVQYCHQ-KYIVHRDLKAENLLLDG-DMNIKIADFGFSNEFTVGNKLDTFCGSP 177
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 161
Y APEL G +D+WS G +L L+ G F G+N
Sbjct: 178 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 106/244 (43%), Gaps = 57/244 (23%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ L F T + L++EY P +Y+ L+ S +++ Y+
Sbjct: 70 LRHPNILRLYGYFHDATR-----VYLILEYAPRGEVYKELQKLSKFDEQRTATYIT---- 120
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG-------SAKQLIAGEANIS 115
++ L+Y H+ RV HRD+KP+NLL+ ++KI DFG S + + G +
Sbjct: 121 ELANALSYCHS-KRVIHRDIKPENLLLGS-AGELKIADFGWSVHAPSSRRXXLXGTLD-- 176
Query: 116 YICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 175
Y PE+I G + +D+WS G + E L+G+P F + I +V
Sbjct: 177 ------YLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--- 226
Query: 176 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
+F FP + A DL SRLL+++PS R E
Sbjct: 227 --------------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVL 260
Query: 236 AHPF 239
HP+
Sbjct: 261 EHPW 264
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 53/258 (20%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
M +DHP + L +F+ +L+ L Y + + ++ S ++ +
Sbjct: 86 MSRLDHPFFVKL---YFTFQDDEKLYFGL--SYAKNGCLLKYIRKIGSFDETC----TRF 136
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI----AGEANIS 115
YT +I L Y+H + HRDLKP+N+L++ H ++I DFG+AK L AN S
Sbjct: 137 YTAEIVSALEYLHG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-S 193
Query: 116 YICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 175
++ + Y +PEL+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 194 FVGTAQYVSPELLTEKSASKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--- 249
Query: 176 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALE 233
++ FP+ K F P+A DL +LL + R C +E
Sbjct: 250 --------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEME 283
Query: 234 AC----AHPFFDELREPN 247
AHPFF+ + N
Sbjct: 284 GYGPLKAHPFFESVTWEN 301
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 123/261 (47%), Gaps = 57/261 (21%)
Query: 5 DHPNVISLKHCFFSTTSKNELFL-----NLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
DHPNVI + S T+ L++ NL ++ + ES K+ S N ++ Y +
Sbjct: 85 DHPNVI---RYYCSETTDRFLYIALELCNLNLQDLVES-----KNVSDENLKLQKEYNPI 136
Query: 60 YTY-QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTH------------QVKICDFGSAKQ 106
QI G+A++H++ ++ HRDLKPQN+LV + ++ I DFG K+
Sbjct: 137 SLLRQIASGVAHLHSL-KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 195
Query: 107 LIAGEANISY-----ICSRFYRAPELIFGATE--YTTSIDIWSAGCVLAELLLGQPLFPG 159
L +G+ + +RAPEL+ +T+ T SIDI+S GCV +L + P
Sbjct: 196 LDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFY-YILSKGKHPF 254
Query: 160 ENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASR 219
+ + II+ G + +E++C++ + + EA DL S+
Sbjct: 255 GDKYSRESNIIR--GIFSLDEMKCLH--------------------DRSLIAEATDLISQ 292
Query: 220 LLQYSPSLRCTALEACAHPFF 240
++ + P R TA++ HP F
Sbjct: 293 MIDHDPLKRPTAMKVLRHPLF 313
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 118/257 (45%), Gaps = 51/257 (19%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +DHP + L +F+ +L+ L E + + ++ S ++ + Y
Sbjct: 84 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE-LLKYIRKIGSFDETC----TRFY 135
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI----AGEANISY 116
T +I L Y+H + HRDLKP+N+L++ H ++I DFG+AK L AN ++
Sbjct: 136 TAEIVSALEYLHG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-AF 192
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + Y +PEL+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 193 VGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL---- 247
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEA 234
++ FP+ K F P+A DL +LL + R C +E
Sbjct: 248 -------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEG 282
Query: 235 C----AHPFFDELREPN 247
AHPFF+ + N
Sbjct: 283 YGPLKAHPFFESVTWEN 299
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 105/229 (45%), Gaps = 29/229 (12%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKH-YSSANQRMPLIYVKL 59
MR D P ++ F E + ME + S + K+ YS + +P +
Sbjct: 75 MRSSDCPYIVQFYGALF-----REGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGK 129
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
T + L ++ ++ HRD+KP N+L+D + +K+CDFG + QL+ A
Sbjct: 130 ITLATVKALNHLKENLKIIHRDIKPSNILLD-RSGNIKLCDFGISGQLVDSIAKTRDAGC 188
Query: 120 RFYRAPELIFGATE---YTTSIDIWSAGCVLAELLLGQPLFPGENAV-DQLVEIIKVLGT 175
R Y APE I + Y D+WS G L EL G+ +P N+V DQL +++K G
Sbjct: 189 RPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK--GD 246
Query: 176 P---TREEIRCMNPNYTDF-------------RFPQIKAHPWHKVFHKR 208
P + E R +P++ +F ++ ++ HP+ ++ +R
Sbjct: 247 PPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEER 295
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M+V++HPN++ L + E L LVMEY + Y A+ RM +
Sbjct: 67 MKVLNHPNIVKLFEVI-----ETEKTLYLVMEYASGGE---VFDYLVAHGRMKEKEARAK 118
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI + Y H + HRDLK +NLL+D +KI DFG + + G ++ S
Sbjct: 119 FRQIVSAVQYCHQ-KFIVHRDLKAENLLLDA-DMNIKIADFGFSNEFTFGNKLDTFCGSP 176
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 161
Y APEL G +D+WS G +L L+ G F G+N
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M+V++HPN++ L + E L LVMEY + Y A+ RM +
Sbjct: 67 MKVLNHPNIVKLFEVI-----ETEKTLYLVMEYASGGE---VFDYLVAHGRMKEKEARAK 118
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI + Y H + HRDLK +NLL+D +KI DFG + + G ++ S
Sbjct: 119 FRQIVSAVQYCHQ-KFIVHRDLKAENLLLDA-DMNIKIADFGFSNEFTFGNKLDTFCGSP 176
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 161
Y APEL G +D+WS G +L L+ G F G+N
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 112/247 (45%), Gaps = 41/247 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLI---YV 57
++ +DHPN+I + F ++ + +VME +L+ SA R + YV
Sbjct: 74 LKSLDHPNIIKIFEVF-----EDYHNMYIVMETCEGG--ELLERIVSAQARGKALSEGYV 126
Query: 58 KLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLV-DPLTHQ-VKICDFGSAKQLIAGEANIS 115
Q+ LAY H+ V H+DLKP+N+L D H +KI DFG A+ + E + +
Sbjct: 127 AELMKQMMNALAYFHS-QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTN 185
Query: 116 YICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 175
+ Y APE+ + T DIWSAG V+ LL G F G + L E+
Sbjct: 186 AAGTALYMAPEVF--KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTS----LEEV------ 233
Query: 176 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
+++ PNY ++ P + P+A+DL ++L P R +A +
Sbjct: 234 --QQKATYKEPNYA------VECRP--------LTPQAVDLLKQMLTKDPERRPSAAQVL 277
Query: 236 AHPFFDE 242
H +F +
Sbjct: 278 HHEWFKQ 284
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 117/257 (45%), Gaps = 51/257 (19%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +DHP + L +F+ +L+ L E + + ++ S ++ + Y
Sbjct: 86 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE-LLKYIRKIGSFDETC----TRFY 137
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI----AGEANISY 116
T +I L Y+H + HRDLKP+N+L++ H ++I DFG+AK L AN +
Sbjct: 138 TAEIVSALEYLHG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XF 194
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + Y +PEL+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 195 VGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL---- 249
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEA 234
++ FP+ K F P+A DL +LL + R C +E
Sbjct: 250 -------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEG 284
Query: 235 C----AHPFFDELREPN 247
AHPFF+ + N
Sbjct: 285 YGPLKAHPFFESVTWEN 301
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M+V++HPN++ L + E L LVMEY + Y A+ RM +
Sbjct: 67 MKVLNHPNIVKLFEVI-----ETEKTLYLVMEYASGGE---VFDYLVAHGRMKEKEARAK 118
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI + Y H + HRDLK +NLL+D +KI DFG + + G ++ S
Sbjct: 119 FRQIVSAVQYCHQ-KFIVHRDLKAENLLLDA-DMNIKIADFGFSNEFTFGNKLDTFCGSP 176
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 161
Y APEL G +D+WS G +L L+ G F G+N
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 106/251 (42%), Gaps = 50/251 (19%)
Query: 2 RVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKLY 60
+V HPN+I LK + + T F LV + + + ++ L + +++
Sbjct: 66 KVSGHPNIIQLKDTYETNT-----FFFLVFDLMKKGELFDYLTEKVTLSEKE-------- 112
Query: 61 TYQIFRGLAYI----HTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISY 116
T +I R L + H + + HRDLKP+N+L+D +K+ DFG + QL GE
Sbjct: 113 TRKIMRALLEVICALHKL-NIVHRDLKPENILLDD-DMNIKLTDFGFSCQLDPGEKLREV 170
Query: 117 ICSRFYRAPELIFGATE-----YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIK 171
+ Y APE+I + Y +D+WS G ++ LL G P F + L I
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMI-- 228
Query: 172 VLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 231
M+ NY Q + W DL SR L P R TA
Sbjct: 229 ------------MSGNY------QFGSPEWDD-----YSDTVKDLVSRFLVVQPQKRYTA 265
Query: 232 LEACAHPFFDE 242
EA AHPFF +
Sbjct: 266 EEALAHPFFQQ 276
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 111/246 (45%), Gaps = 41/246 (16%)
Query: 29 LVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLL 88
+ E + ++ + LK + Q PL +V+ YQ+ L ++H ++ H DLKP+N+L
Sbjct: 99 IAFELLGKNTFEFLK--ENNFQPYPLPHVRHMAYQLCHALRFLHE-NQLTHTDLKPENIL 155
Query: 89 V-----DPLTHQVKIC-------------DFGSAKQLIAGEANISYICSRFYRAPELIFG 130
+ L ++ K C DFGSA E + + + +R YR PE+I
Sbjct: 156 FVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT--FDHEHHTTIVATRHYRPPEVIL- 212
Query: 131 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG-------TPTREEIR- 182
+ D+WS GC+L E G LF + LV + K+LG TR++
Sbjct: 213 ELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYF 272
Query: 183 -----CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAI---DLASRLLQYSPSLRCTALEA 234
+ N +D R+ + P K + + E + DL R+L++ P+ R T EA
Sbjct: 273 YKGGLVWDENSSDGRYVKENCKPL-KSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEA 331
Query: 235 CAHPFF 240
HPFF
Sbjct: 332 LLHPFF 337
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 106/251 (42%), Gaps = 50/251 (19%)
Query: 2 RVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKLY 60
+V HPN+I LK + + T F LV + + + ++ L + +++
Sbjct: 79 KVSGHPNIIQLKDTYETNT-----FFFLVFDLMKKGELFDYLTEKVTLSEKE-------- 125
Query: 61 TYQIFRGLAYI----HTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISY 116
T +I R L + H + + HRDLKP+N+L+D +K+ DFG + QL GE
Sbjct: 126 TRKIMRALLEVICALHKL-NIVHRDLKPENILLDD-DMNIKLTDFGFSCQLDPGEKLREV 183
Query: 117 ICSRFYRAPELIFGATE-----YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIK 171
+ Y APE+I + Y +D+WS G ++ LL G P F + L I
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMI-- 241
Query: 172 VLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 231
M+ NY Q + W DL SR L P R TA
Sbjct: 242 ------------MSGNY------QFGSPEWDD-----YSDTVKDLVSRFLVVQPQKRYTA 278
Query: 232 LEACAHPFFDE 242
EA AHPFF +
Sbjct: 279 EEALAHPFFQQ 289
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 111/246 (45%), Gaps = 41/246 (16%)
Query: 29 LVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLL 88
+ E + ++ + LK + Q PL +V+ YQ+ L ++H ++ H DLKP+N+L
Sbjct: 108 IAFELLGKNTFEFLK--ENNFQPYPLPHVRHMAYQLCHALRFLHE-NQLTHTDLKPENIL 164
Query: 89 V-----DPLTHQVKIC-------------DFGSAKQLIAGEANISYICSRFYRAPELIFG 130
+ L ++ K C DFGSA E + + + +R YR PE+I
Sbjct: 165 FVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT--FDHEHHTTIVATRHYRPPEVIL- 221
Query: 131 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG-------TPTREEIR- 182
+ D+WS GC+L E G LF + LV + K+LG TR++
Sbjct: 222 ELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYF 281
Query: 183 -----CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAI---DLASRLLQYSPSLRCTALEA 234
+ N +D R+ + P K + + E + DL R+L++ P+ R T EA
Sbjct: 282 YKGGLVWDENSSDGRYVKENCKPL-KSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEA 340
Query: 235 CAHPFF 240
HPFF
Sbjct: 341 LLHPFF 346
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 102/225 (45%), Gaps = 39/225 (17%)
Query: 50 QRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLV-----DPLTHQVKIC----- 99
Q PL +V+ YQ+ L ++H ++ H DLKP+N+L + L ++ K C
Sbjct: 150 QPYPLPHVRHMAYQLCHALRFLHE-NQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSV 208
Query: 100 --------DFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
DFGSA E + + + +R YR PE+I + D+WS GC+L E
Sbjct: 209 KNTSIRVADFGSAT--FDHEHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYY 265
Query: 152 LGQPLFPGENAVDQLVEIIKVLG-------TPTREEIR------CMNPNYTDFRFPQIKA 198
G LF + LV + K+LG TR++ + N +D R+ +
Sbjct: 266 RGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENC 325
Query: 199 HPWHKVFHKRMPPEAI---DLASRLLQYSPSLRCTALEACAHPFF 240
P K + + E + DL R+L++ P+ R T EA HPFF
Sbjct: 326 KPL-KSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 369
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 117/257 (45%), Gaps = 51/257 (19%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +DHP + L +F+ +L+ L E + + ++ S ++ + Y
Sbjct: 86 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE-LLKYIRKIGSFDETC----TRFY 137
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI----AGEANISY 116
T +I L Y+H + HRDLKP+N+L++ H ++I DFG+AK L AN +
Sbjct: 138 TAEIVSALEYLHG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XF 194
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + Y +PEL+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 195 VGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL---- 249
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEA 234
++ FP+ K F P+A DL +LL + R C +E
Sbjct: 250 -------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEG 284
Query: 235 C----AHPFFDELREPN 247
AHPFF+ + N
Sbjct: 285 YGPLKAHPFFESVTWEN 301
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 117/257 (45%), Gaps = 51/257 (19%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +DHP + L +F+ +L+ L E + + ++ S ++ + Y
Sbjct: 84 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE-LLKYIRKIGSFDETC----TRFY 135
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI----AGEANISY 116
T +I L Y+H + HRDLKP+N+L++ H ++I DFG+AK L AN +
Sbjct: 136 TAEIVSALEYLHG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XF 192
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + Y +PEL+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 193 VGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL---- 247
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEA 234
++ FP+ K F P+A DL +LL + R C +E
Sbjct: 248 -------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEG 282
Query: 235 C----AHPFFDELREPN 247
AHPFF+ + N
Sbjct: 283 YGPLKAHPFFESVTWEN 299
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 116/257 (45%), Gaps = 51/257 (19%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +DHP + L +F+ +L+ L E + + ++ S ++ + Y
Sbjct: 84 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE-LLKYIRKIGSFDETC----TRFY 135
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI----AGEANISY 116
T +I L Y+H + HRDLKP+N+L++ H ++I DFG+AK L AN +
Sbjct: 136 TAEIVSALEYLHG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XF 192
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + Y +PEL+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 193 VGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL---- 247
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEA 234
++ FP+ + P+A DL +LL + R C +E
Sbjct: 248 -------------EYDFPE------------KFFPKARDLVEKLLVLDATKRLGCEEMEG 282
Query: 235 C----AHPFFDELREPN 247
AHPFF+ + N
Sbjct: 283 YGPLKAHPFFESVTWEN 299
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 117/257 (45%), Gaps = 51/257 (19%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +DHP + L +F+ +L+ L E + + ++ S ++ + Y
Sbjct: 87 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE-LLKYIRKIGSFDETC----TRFY 138
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI----AGEANISY 116
T +I L Y+H + HRDLKP+N+L++ H ++I DFG+AK L AN +
Sbjct: 139 TAEIVSALEYLHG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XF 195
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + Y +PEL+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 196 VGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL---- 250
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEA 234
++ FP+ K F P+A DL +LL + R C +E
Sbjct: 251 -------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEG 285
Query: 235 C----AHPFFDELREPN 247
AHPFF+ + N
Sbjct: 286 YGPLKAHPFFESVTWEN 302
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 116/257 (45%), Gaps = 51/257 (19%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +DHP + L +F+ +L+ L E + + ++ S ++ + Y
Sbjct: 68 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE-LLKYIRKIGSFDETC----TRFY 119
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI----AGEANISY 116
T +I L Y+H + HRDLKP+N+L++ H ++I DFG+AK L AN +
Sbjct: 120 TAEIVSALEYLHG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XF 176
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + Y +PEL+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 177 VGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL---- 231
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEA 234
++ FP+ + P+A DL +LL + R C +E
Sbjct: 232 -------------EYDFPE------------KFFPKARDLVEKLLVLDATKRLGCEEMEG 266
Query: 235 C----AHPFFDELREPN 247
AHPFF+ + N
Sbjct: 267 YGPLKAHPFFESVTWEN 283
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 117/257 (45%), Gaps = 51/257 (19%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +DHP + L +F+ +L+ L E + + ++ S ++ + Y
Sbjct: 84 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE-LLKYIRKIGSFDETC----TRFY 135
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI----AGEANISY 116
T +I L Y+H + HRDLKP+N+L++ H ++I DFG+AK L AN +
Sbjct: 136 TAEIVSALEYLHG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XF 192
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + Y +PEL+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 193 VGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL---- 247
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEA 234
++ FP+ K F P+A DL +LL + R C +E
Sbjct: 248 -------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEG 282
Query: 235 C----AHPFFDELREPN 247
AHPFF+ + N
Sbjct: 283 YGPLKAHPFFESVTWEN 299
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 116/257 (45%), Gaps = 51/257 (19%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +DHP + L +F+ +L+ L E + + ++ S ++ + Y
Sbjct: 83 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE-LLKYIRKIGSFDETC----TRFY 134
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI----AGEANISY 116
T +I L Y+H + HRDLKP+N+L++ H ++I DFG+AK L AN +
Sbjct: 135 TAEIVSALEYLHG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XF 191
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + Y +PEL+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 192 VGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL---- 246
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEA 234
++ FP+ + P+A DL +LL + R C +E
Sbjct: 247 -------------EYDFPE------------KFFPKARDLVEKLLVLDATKRLGCEEMEG 281
Query: 235 C----AHPFFDELREPN 247
AHPFF+ + N
Sbjct: 282 YGPLKAHPFFESVTWEN 298
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 116/257 (45%), Gaps = 51/257 (19%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +DHP + L +F+ +L+ L E + + ++ S ++ + Y
Sbjct: 61 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE-LLKYIRKIGSFDETC----TRFY 112
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI----AGEANISY 116
T +I L Y+H + HRDLKP+N+L++ H ++I DFG+AK L AN +
Sbjct: 113 TAEIVSALEYLHG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XF 169
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + Y +PEL+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 170 VGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL---- 224
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEA 234
++ FP+ + P+A DL +LL + R C +E
Sbjct: 225 -------------EYDFPE------------KFFPKARDLVEKLLVLDATKRLGCEEMEG 259
Query: 235 C----AHPFFDELREPN 247
AHPFF+ + N
Sbjct: 260 YGPLKAHPFFESVTWEN 276
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 116/257 (45%), Gaps = 51/257 (19%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +DHP + L +F+ +L+ L E + + ++ S ++ + Y
Sbjct: 62 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE-LLKYIRKIGSFDETC----TRFY 113
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI----AGEANISY 116
T +I L Y+H + HRDLKP+N+L++ H ++I DFG+AK L AN +
Sbjct: 114 TAEIVSALEYLHG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XF 170
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + Y +PEL+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 171 VGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL---- 225
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEA 234
++ FP+ + P+A DL +LL + R C +E
Sbjct: 226 -------------EYDFPE------------KFFPKARDLVEKLLVLDATKRLGCEEMEG 260
Query: 235 C----AHPFFDELREPN 247
AHPFF+ + N
Sbjct: 261 YGPLKAHPFFESVTWEN 277
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 117/257 (45%), Gaps = 51/257 (19%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +DHP + L +F+ +L+ L E + + ++ S ++ + Y
Sbjct: 86 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE-LLKYIRKIGSFDETC----TRFY 137
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI----AGEANISY 116
T +I L Y+H + HRDLKP+N+L++ H ++I DFG+AK L AN +
Sbjct: 138 TAEIVSALEYLHG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XF 194
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + Y +PEL+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 195 VGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL---- 249
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEA 234
++ FP+ K F P+A DL +LL + R C +E
Sbjct: 250 -------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEG 284
Query: 235 C----AHPFFDELREPN 247
AHPFF+ + N
Sbjct: 285 YGPLKAHPFFESVTWEN 301
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 117/257 (45%), Gaps = 51/257 (19%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +DHP + L +F+ +L+ L E + + ++ S ++ + Y
Sbjct: 63 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE-LLKYIRKIGSFDETC----TRFY 114
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI----AGEANISY 116
T +I L Y+H + HRDLKP+N+L++ H ++I DFG+AK L AN +
Sbjct: 115 TAEIVSALEYLHG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XF 171
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + Y +PEL+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 172 VGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL---- 226
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEA 234
++ FP+ K F P+A DL +LL + R C +E
Sbjct: 227 -------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEG 261
Query: 235 C----AHPFFDELREPN 247
AHPFF+ + N
Sbjct: 262 YGPLKAHPFFESVTWEN 278
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 117/257 (45%), Gaps = 51/257 (19%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +DHP + L +F+ +L+ L E + + ++ S ++ + Y
Sbjct: 64 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE-LLKYIRKIGSFDETC----TRFY 115
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI----AGEANISY 116
T +I L Y+H + HRDLKP+N+L++ H ++I DFG+AK L AN +
Sbjct: 116 TAEIVSALEYLHG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XF 172
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + Y +PEL+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 173 VGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL---- 227
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEA 234
++ FP+ K F P+A DL +LL + R C +E
Sbjct: 228 -------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEG 262
Query: 235 C----AHPFFDELREPN 247
AHPFF+ + N
Sbjct: 263 YGPLKAHPFFESVTWEN 279
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M+V++HPN++ L + E L LVMEY + Y A+ RM +
Sbjct: 67 MKVLNHPNIVKLFEVI-----ETEKTLYLVMEYASGGE---VFDYLVAHGRMKEKEARAK 118
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI + Y H + HRDLK +NLL+D +KI DFG + + G + S
Sbjct: 119 FRQIVSAVQYCHQ-KFIVHRDLKAENLLLDA-DMNIKIADFGFSNEFTFGNKLDEFCGSP 176
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 161
Y APEL G +D+WS G +L L+ G F G+N
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 117/257 (45%), Gaps = 51/257 (19%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +DHP + L +F+ +L+ L E + + ++ S ++ + Y
Sbjct: 86 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE-LLKYIRKIGSFDETC----TRFY 137
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI----AGEANISY 116
T +I L Y+H + HRDLKP+N+L++ H ++I DFG+AK L AN +
Sbjct: 138 TAEIVSALEYLHG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XF 194
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + Y +PEL+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 195 VGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL---- 249
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEA 234
++ FP+ K F P+A DL +LL + R C +E
Sbjct: 250 -------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEG 284
Query: 235 C----AHPFFDELREPN 247
AHPFF+ + N
Sbjct: 285 YGPLKAHPFFESVTWEN 301
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 102/243 (41%), Gaps = 35/243 (14%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
MR +D P ++ F E + + ME + S+ + K Q +P +
Sbjct: 60 MRTVDCPFTVTFYGALF-----REGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKI 114
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
I + L ++H+ V HRD+KP N+L++ L QVK+CDFG + L+ A +
Sbjct: 115 AVSIVKALEHLHSKLSVIHRDVKPSNVLINALG-QVKMCDFGISGYLVDDVAKDIDAGCK 173
Query: 121 FYRAPELI---FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 177
Y APE I Y+ DIWS G + EL + + FP ++ GTP
Sbjct: 174 PYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR--FPYDS-----------WGTPF 220
Query: 178 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
++ Q+ P ++ + E +D S+ L+ + R T E H
Sbjct: 221 QQ-------------LKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267
Query: 238 PFF 240
PFF
Sbjct: 268 PFF 270
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 33/190 (17%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDP-LTHQVKICDFGSAKQ---LIAGE--ANISY 116
QIF L Y+H +CHRD+KP+N L + ++K+ DFG +K+ L GE +
Sbjct: 176 QIFSALHYLHN-QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTK 234
Query: 117 ICSRFYRAPELIFGATE-YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 175
+ ++ APE++ E Y D WSAG +L LL+G FPG N D + +++
Sbjct: 235 AGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLN---- 290
Query: 176 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
+++ NPNY + P A DL S LL + R A+ A
Sbjct: 291 ---KKLCFENPNYN------------------VLSPLARDLLSNLLNRNVDERFDAMRAL 329
Query: 236 AHPFFDELRE 245
HP+ + +
Sbjct: 330 QHPWISQFSD 339
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M+V++HPN++ L + E L LVMEY + Y A+ RM +
Sbjct: 67 MKVLNHPNIVKLFEVI-----ETEKTLYLVMEYASGGE---VFDYLVAHGRMKEKEARAK 118
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI + Y H + HRDLK +NLL+D +KI DFG + + G ++ +
Sbjct: 119 FRQIVSAVQYCHQ-KFIVHRDLKAENLLLDA-DMNIKIADFGFSNEFTFGNKLDAFCGAP 176
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 161
Y APEL G +D+WS G +L L+ G F G+N
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 104/238 (43%), Gaps = 42/238 (17%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVP--ESMYRVLKHYSSANQRMPLIYVK 58
++ +DHPN+I L F +++ + LV E+ E +++ + I
Sbjct: 100 LKSLDHPNIIKLFDVF-----EDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANI--- 151
Query: 59 LYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTH--QVKICDFGSAKQLIAGEANISY 116
QI G+ Y+H + HRD+KP+N+L++ +KI DFG +
Sbjct: 152 --MKQILSGICYLHK-HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR 208
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + +Y APE++ +Y D+WS G ++ LL G P F G+N D + ++ K
Sbjct: 209 LGTAYYIAPEVL--KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEK----- 261
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEA 234
Y DF + W K + EA +L +L Y + RCTA EA
Sbjct: 262 --------GKYYFDF-------NDW-----KNISDEAKELIKLMLTYDYNKRCTAEEA 299
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 110/245 (44%), Gaps = 40/245 (16%)
Query: 2 RVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYT 61
+V HP++I+L + S++ F+ LV + + + L Y + + +
Sbjct: 155 QVAGHPHIITLIDSYESSS-----FMFLVFDLMRKGE---LFDYLTEKVALSEKETRSIM 206
Query: 62 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF 121
+ ++++H + HRDLKP+N+L+D Q+++ DFG + L GE +
Sbjct: 207 RSLLEAVSFLH-ANNIVHRDLKPENILLDD-NMQIRLSDFGFSCHLEPGEKLRELCGTPG 264
Query: 122 YRAPELIFGATE-----YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
Y APE++ + + Y +D+W+ G +L LL G P F + L I++
Sbjct: 265 YLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIME----- 319
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 236
+ + +P + D R +K DL SRLLQ P R TA +A
Sbjct: 320 --GQYQFSSPEWDD-RSSTVK-----------------DLISRLLQVDPEARLTAEQALQ 359
Query: 237 HPFFD 241
HPFF+
Sbjct: 360 HPFFE 364
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 102/232 (43%), Gaps = 38/232 (16%)
Query: 53 PLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ----------------- 95
P+ V+ +Q+ + + ++H ++ H DLKP+N+L ++
Sbjct: 135 PIHQVRHMAFQLCQAVKFLHD-NKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKST 193
Query: 96 -VKICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ 154
V++ DFGSA E + + + +R YRAPE+I ++ D+WS GC++ E +G
Sbjct: 194 AVRVVDFGSAT--FDHEHHSTIVSTRHYRAPEVIL-ELGWSQPCDVWSIGCIIFEYYVGF 250
Query: 155 PLFPGENAVDQLVEIIKVLGTPTREEIRC-------------MNPNYTDFRFPQIKAHPW 201
LF + + L + ++LG IR + N + R+ + P
Sbjct: 251 TLFQTHDNREHLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPL 310
Query: 202 HKVFHKRMPP--EAIDLASRLLQYSPSLRCTALEACAHPFFDELR-EPNARL 250
+ + DL +L+Y P+ R T EA HPFF LR EP +L
Sbjct: 311 RRYLTSEAEEHHQLFDLIESMLEYEPAKRLTLGEALQHPFFARLRAEPPNKL 362
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 123/265 (46%), Gaps = 61/265 (23%)
Query: 5 DHPNVISLKHCFFSTTSKNELFL-----NLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
DHPNVI + S T+ L++ NL ++ + ES K+ S N ++ Y +
Sbjct: 67 DHPNVI---RYYCSETTDRFLYIALELCNLNLQDLVES-----KNVSDENLKLQKEYNPI 118
Query: 60 YTY-QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTH------------QVKICDFGSAKQ 106
QI G+A++H++ ++ HRDLKPQN+LV + ++ I DFG K+
Sbjct: 119 SLLRQIASGVAHLHSL-KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 177
Query: 107 LIAGEANISY-----ICSRFYRAPELIFGATEYTT------SIDIWSAGCVLAELLLGQP 155
L +G+++ + +RAPEL+ + T SIDI+S GCV +L +
Sbjct: 178 LDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY-YILSKG 236
Query: 156 LFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAID 215
P + + II+ G + +E++C++ + + EA D
Sbjct: 237 KHPFGDKYSRESNIIR--GIFSLDEMKCLHD--------------------RSLIAEATD 274
Query: 216 LASRLLQYSPSLRCTALEACAHPFF 240
L S+++ + P R TA++ HP F
Sbjct: 275 LISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 88/171 (51%), Gaps = 31/171 (18%)
Query: 4 MDHPNVISL------KHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYV 57
+ H N++S+ C++ LVMEY+ L Y ++ + +
Sbjct: 68 LSHQNIVSMIDVDEEDDCYY-----------LVMEYIEGP---TLSEYIESHGPLSVDTA 113
Query: 58 KLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS-- 115
+T QI G+ + H + R+ HRD+KPQN+L+D +KI DFG AK L E +++
Sbjct: 114 INFTNQILDGIKHAHDM-RIVHRDIKPQNILIDS-NKTLKIFDFGIAKAL--SETSLTQT 169
Query: 116 --YICSRFYRAPELIFG-ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV 163
+ + Y +PE G AT+ T DI+S G VL E+L+G+P F GE AV
Sbjct: 170 NHVLGTVQYFSPEQAKGEATDECT--DIYSIGIVLYEMLVGEPPFNGETAV 218
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 124/276 (44%), Gaps = 46/276 (16%)
Query: 2 RVMDHPNVISLKHCFFSTTSKNELFLNLVM--EYVPESMYRVLKHYSSANQRMPLIYVKL 59
R++ HPN++ L H S + L +LV E + + R ++YS A+ +
Sbjct: 76 RLLKHPNIVRL-HDSISEEGHHYLIFDLVTGGELFEDIVAR--EYYSEADASHCI----- 127
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTH--QVKICDFGSAKQLIAGE--ANIS 115
QI + + H + V HRDLKP+NLL+ VK+ DFG A + + GE A
Sbjct: 128 --QQILEAVLHCHQMG-VVHRDLKPENLLLASKLKGAAVKLADFGLAIE-VEGEQQAWFG 183
Query: 116 YICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 175
+ + Y +PE + Y +D+W+ G +L LL+G P F E+ +L + IK
Sbjct: 184 FAGTPGYLSPE-VLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ-HRLYQQIKA--- 238
Query: 176 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
DF P+ W V PEA DL +++L +PS R TA EA
Sbjct: 239 -----------GAYDFPSPE-----WDTV-----TPEAKDLINKMLTINPSKRITAAEAL 277
Query: 236 AHPFFDELREPNARLPNGRPLPPL--FNFKQELSGA 269
HP+ + + + L FN +++L GA
Sbjct: 278 KHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGA 313
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 105/243 (43%), Gaps = 49/243 (20%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYV--PESMYRVLKHYSSANQRMPLIYVKLYTYQ 63
HP + +LK+ F + L VMEY E + + + + R + Y +
Sbjct: 69 HPFLTALKYSFQTHDR-----LCFVMEYANGGELFFHLSRERVFSEDR-----ARFYGAE 118
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR-FY 122
I L Y+H+ V +RDLK +NL++D H +KI DFG K+ I A + C Y
Sbjct: 119 IVSALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKXFCGTPEY 177
Query: 123 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 182
APE + +Y ++D W G V+ E++ G+ F ++ ++L E+I + EEIR
Sbjct: 178 LAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM------EEIR 229
Query: 183 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAH 237
F + + PEA L S LL+ P R A E H
Sbjct: 230 ----------------------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 267
Query: 238 PFF 240
FF
Sbjct: 268 RFF 270
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 105/243 (43%), Gaps = 49/243 (20%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYV--PESMYRVLKHYSSANQRMPLIYVKLYTYQ 63
HP + +LK+ F + L VMEY E + + + + R + Y +
Sbjct: 68 HPFLTALKYSFQTHDR-----LCFVMEYANGGELFFHLSRERVFSEDR-----ARFYGAE 117
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR-FY 122
I L Y+H+ V +RDLK +NL++D H +KI DFG K+ I A + C Y
Sbjct: 118 IVSALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKXFCGTPEY 176
Query: 123 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 182
APE + +Y ++D W G V+ E++ G+ F ++ ++L E+I + EEIR
Sbjct: 177 LAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM------EEIR 228
Query: 183 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAH 237
F + + PEA L S LL+ P R A E H
Sbjct: 229 ----------------------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 266
Query: 238 PFF 240
FF
Sbjct: 267 RFF 269
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 105/243 (43%), Gaps = 49/243 (20%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYV--PESMYRVLKHYSSANQRMPLIYVKLYTYQ 63
HP + +LK+ F + L VMEY E + + + + R + Y +
Sbjct: 67 HPFLTALKYSFQTHDR-----LCFVMEYANGGELFFHLSRERVFSEDR-----ARFYGAE 116
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR-FY 122
I L Y+H+ V +RDLK +NL++D H +KI DFG K+ I A + C Y
Sbjct: 117 IVSALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKXFCGTPEY 175
Query: 123 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 182
APE + +Y ++D W G V+ E++ G+ F ++ ++L E+I + EEIR
Sbjct: 176 LAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM------EEIR 227
Query: 183 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAH 237
F + + PEA L S LL+ P R A E H
Sbjct: 228 ----------------------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 265
Query: 238 PFF 240
FF
Sbjct: 266 RFF 268
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 103/242 (42%), Gaps = 39/242 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
+++ HP++I L + ++ +++F+ VMEYV L Y N R+ +
Sbjct: 70 LKLFRHPHIIKL---YQVISTPSDIFM--VMEYVSGGE---LFDYICKNGRLDEKESRRL 121
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI G+ Y H V HRDLKP+N+L+D + KI DFG + + GE S
Sbjct: 122 FQQILSGVDYCHR-HMVVHRDLKPENVLLDAHMN-AKIADFGLSNMMSDGEFLRXSCGSP 179
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 180
Y APE+I G +DIWS+G +L LL G F ++ PT +
Sbjct: 180 NYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH-------------VPTLFK 226
Query: 181 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
C YT PQ + P I L +LQ P R T + H +F
Sbjct: 227 KICDGIFYT----PQY------------LNPSVISLLKHMLQVDPMKRATIKDIREHEWF 270
Query: 241 DE 242
+
Sbjct: 271 KQ 272
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 105/243 (43%), Gaps = 49/243 (20%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYV--PESMYRVLKHYSSANQRMPLIYVKLYTYQ 63
HP + +LK+ F + L VMEY E + + + + R + Y +
Sbjct: 207 HPFLTALKYSFQTHDR-----LCFVMEYANGGELFFHLSRERVFSEDR-----ARFYGAE 256
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR-FY 122
I L Y+H+ V +RDLK +NL++D H +KI DFG K+ I A + C Y
Sbjct: 257 IVSALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKTFCGTPEY 315
Query: 123 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 182
APE + +Y ++D W G V+ E++ G+ F ++ ++L E+I + EEIR
Sbjct: 316 LAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM------EEIR 367
Query: 183 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAH 237
F + + PEA L S LL+ P R A E H
Sbjct: 368 ----------------------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405
Query: 238 PFF 240
FF
Sbjct: 406 RFF 408
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 106/243 (43%), Gaps = 49/243 (20%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYV--PESMYRVLKHYSSANQRMPLIYVKLYTYQ 63
HP + +LK+ F + L VMEY E + + + + R + Y +
Sbjct: 210 HPFLTALKYSFQTHDR-----LCFVMEYANGGELFFHLSRERVFSEDR-----ARFYGAE 259
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR-FY 122
I L Y+H+ V +RDLK +NL++D H +KI DFG K+ I A + C Y
Sbjct: 260 IVSALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKTFCGTPEY 318
Query: 123 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 182
APE + +Y ++D W G V+ E++ G+ F ++ ++L E+I + EEI
Sbjct: 319 LAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM------EEI- 369
Query: 183 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAH 237
RFP+ + PEA L S LL+ P R A E H
Sbjct: 370 ---------RFPRT------------LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 408
Query: 238 PFF 240
FF
Sbjct: 409 RFF 411
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 114/257 (44%), Gaps = 51/257 (19%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +DHP + L +F+ +L+ L E + + ++ S ++ + Y
Sbjct: 89 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE-LLKYIRKIGSFDETC----TRFY 140
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI----AGEANISY 116
T +I L Y+H + HRDLKP+N+L++ H ++I DFG+AK L AN +
Sbjct: 141 TAEIVSALEYLHG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XF 197
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + Y +PEL+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 198 VGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL---- 252
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEA 234
++ FP P+A DL +LL + R C +E
Sbjct: 253 -------------EYDFPAA------------FFPKARDLVEKLLVLDATKRLGCEEMEG 287
Query: 235 C----AHPFFDELREPN 247
AHPFF+ + N
Sbjct: 288 YGPLKAHPFFESVTWEN 304
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 121/265 (45%), Gaps = 61/265 (23%)
Query: 5 DHPNVISLKHCFFSTTSKNELFL-----NLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
DHPNVI + S T+ L++ NL ++ + ES K+ S N ++ Y +
Sbjct: 67 DHPNVI---RYYCSETTDRFLYIALELCNLNLQDLVES-----KNVSDENLKLQKEYNPI 118
Query: 60 YTY-QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTH------------QVKICDFGSAKQ 106
QI G+A++H++ ++ HRDLKPQN+LV + ++ I DFG K+
Sbjct: 119 SLLRQIASGVAHLHSL-KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 177
Query: 107 LIAGEANISY-----ICSRFYRAPELIFGATEYTT------SIDIWSAGCVLAELLLGQP 155
L +G+ + +RAPEL+ + T SIDI+S GCV +L +
Sbjct: 178 LDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY-YILSKG 236
Query: 156 LFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAID 215
P + + II+ G + +E++C++ + + EA D
Sbjct: 237 KHPFGDKYSRESNIIR--GIFSLDEMKCLHD--------------------RSLIAEATD 274
Query: 216 LASRLLQYSPSLRCTALEACAHPFF 240
L S+++ + P R TA++ HP F
Sbjct: 275 LISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 111/240 (46%), Gaps = 32/240 (13%)
Query: 2 RVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYT 61
R + HPN++ K + T L ++MEY S + + +A R + +
Sbjct: 71 RSLRHPNIVRFKEVILTPT-----HLAIIMEYA--SGGELYERICNAG-RFSEDEARFFF 122
Query: 62 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPL-THQVKICDFGSAKQLIAGEANISYICSR 120
Q+ G++Y H++ ++CHRDLK +N L+D ++KICDFG +K + S + +
Sbjct: 123 QQLLSGVSYCHSM-QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTP 181
Query: 121 FYRAPELIFGATEYTTSI-DIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTR 178
Y APE++ EY I D+WS G L +L+G P E D I ++L
Sbjct: 182 AYIAPEVLL-RQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYS 240
Query: 179 --EEIRCMNPN-------------YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQY 223
++IR ++P T P+IK H W F K +P + ++ ++ Q+
Sbjct: 241 IPDDIR-ISPECCHLISRIFVADPATRISIPEIKTHSW---FLKNLPADLMNESNTGSQF 296
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 26/162 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSAN-QRMPLIYVKL 59
++ + H N++ K +S +N L L+MEY+P Y L+ Y A+ +R+ I +
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRN---LKLIMEYLP---YGSLRDYLQAHAERIDHIKLLQ 121
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA---------- 109
YT QI +G+ Y+ T R HRDL +N+LV+ ++VKI DFG K L
Sbjct: 122 YTSQICKGMEYLGT-KRYIHRDLATRNILVEN-ENRVKIGDFGLTKVLPQDKEXXKVKEP 179
Query: 110 GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
GE+ I F+ APE + ++++ + D+WS G VL EL
Sbjct: 180 GESPI------FWYAPESL-TESKFSVASDVWSFGVVLYELF 214
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 124/294 (42%), Gaps = 73/294 (24%)
Query: 8 NVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFR 66
NV+ +K+CF KN+ + + M Y+ ES +L S V+ Y +F+
Sbjct: 81 NVMGVKYCF----RKNDHVV-IAMPYLEHESFLDILNSLSFQE-------VREYMLNLFK 128
Query: 67 GLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK----------QLIAGEA---- 112
L IH + HRD+KP N L + + + DFG A+ + + EA
Sbjct: 129 ALKRIHQFG-IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQER 187
Query: 113 ---NISYIC-SR-----------FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PL 156
N IC SR +RAPE++ TT+ID+WSAG + LL G+ P
Sbjct: 188 CSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247
Query: 157 FPGENAVDQLVEIIKVLGTPTREEIR-----------------------CMNPNYTDFRF 193
+ + + L +I+ + G +RE I+ C D
Sbjct: 248 YKASDDLTALAQIMTIRG--SRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSST 305
Query: 194 PQ----IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 243
P+ I+ H + +P EA DL +LL +P+ R TA EA HPFF ++
Sbjct: 306 PKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDM 359
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M+V++HPN++ L + E L LVMEY + Y A+ M +
Sbjct: 60 MKVLNHPNIVKLFEVI-----ETEKTLYLVMEYASGGE---VFDYLVAHGWMKEKEARAK 111
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI + Y H + HRDLK +NLL+D +KI DFG + + G ++ S
Sbjct: 112 FRQIVSAVQYCHQ-KFIVHRDLKAENLLLDA-DMNIKIADFGFSNEFTFGNKLDTFCGSP 169
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 161
Y APEL G +D+WS G +L L+ G F G+N
Sbjct: 170 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 210
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 110/246 (44%), Gaps = 41/246 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVP--ESMYRVLKHYSSANQRMPLIYVK 58
M +DH N+I L F SKN++ L VMEYV E R++ + + ++++K
Sbjct: 140 MNQLDHANLIQLYDAF---ESKNDIVL--VMEYVDGGELFDRIIDESYNLTELDTILFMK 194
Query: 59 LYTYQIFRGLAYIHTVPRVCHRDLKPQNLL-VDPLTHQVKICDFGSAKQLIAGEANISYI 117
QI G+ ++H + + H DLKP+N+L V+ Q+KI DFG A++ E
Sbjct: 195 ----QICEGIRHMHQM-YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF 249
Query: 118 CSRFYRAPELI-FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + APE++ + + T D+WS G + LL G F G+N + L I+
Sbjct: 250 GTPEFLAPEVVNYDFVSFPT--DMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDL 307
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 236
EE + + EA + S+LL S R +A EA
Sbjct: 308 EDEEFQ-------------------------DISEEAKEFISKLLIKEKSWRISASEALK 342
Query: 237 HPFFDE 242
HP+ +
Sbjct: 343 HPWLSD 348
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 90/175 (51%), Gaps = 13/175 (7%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQ 63
++HP V+ L + F ++ +L+L L + R+ K + VK Y +
Sbjct: 87 VNHPFVVKLHYAF---QTEGKLYLILDFLRGGDLFTRLSKEVMFTEED-----VKFYLAE 138
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF-Y 122
+ GL ++H++ + +RDLKP+N+L+D H +K+ DFG +K+ I E C Y
Sbjct: 139 LALGLDHLHSLG-IIYRDLKPENILLDEEGH-IKLTDFGLSKEAIDHEKKAYSFCGTVEY 196
Query: 123 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV-LGTP 176
APE++ ++ S D WS G ++ E+L G F G++ + + I+K LG P
Sbjct: 197 MAPEVV-NRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMP 250
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 114/262 (43%), Gaps = 43/262 (16%)
Query: 2 RVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYT 61
+ +D+P+V+ H FF +++ F+ +V+E R L + + + +
Sbjct: 97 KSLDNPHVVGF-HGFF----EDDDFVYVVLEICRR---RSLLELHKRRKAVTEPEARYFM 148
Query: 62 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICSR 120
Q +G+ Y+H RV HRDLK NL ++ VKI DFG A ++ GE + +
Sbjct: 149 RQTIQGVQYLHN-NRVIHRDLKLGNLFLND-DMDVKIGDFGLATKIEFDGERKKTLCGTP 206
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 180
Y APE + ++ +DIWS GC+L LL+G+P F E
Sbjct: 207 NYIAPE-VLCKKGHSFEVDIWSLGCILYTLLVGKPPF----------------------E 243
Query: 181 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
C+ Y +IK + + H + P A L R+L P+LR + E FF
Sbjct: 244 TSCLKETYI-----RIKKNEYSVPRH--INPVASALIRRMLHADPTLRPSVAELLTDEFF 296
Query: 241 DELREPNARLPNG-RPLPPLFN 261
P RLP +PP F+
Sbjct: 297 TSGYAP-MRLPTSCLTVPPRFS 317
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 124/276 (44%), Gaps = 46/276 (16%)
Query: 2 RVMDHPNVISLKHCFFSTTSKNELFLNLVM--EYVPESMYRVLKHYSSANQRMPLIYVKL 59
R++ HPN++ L H S + L +LV E + + R ++YS A+ +
Sbjct: 65 RLLKHPNIVRL-HDSISEEGHHYLIFDLVTGGELFEDIVAR--EYYSEADASHCI----- 116
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTH--QVKICDFGSAKQLIAGE--ANIS 115
QI + + H + V HR+LKP+NLL+ VK+ DFG A + + GE A
Sbjct: 117 --QQILEAVLHCHQMG-VVHRNLKPENLLLASKLKGAAVKLADFGLAIE-VEGEQQAWFG 172
Query: 116 YICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 175
+ + Y +PE + Y +D+W+ G +L LL+G P F E+ +L + IK
Sbjct: 173 FAGTPGYLSPE-VLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ-HRLYQQIKA--- 227
Query: 176 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
DF P+ W V PEA DL +++L +PS R TA EA
Sbjct: 228 -----------GAYDFPSPE-----WDTV-----TPEAKDLINKMLTINPSKRITAAEAL 266
Query: 236 AHPFFDELREPNARLPNGRPLPPL--FNFKQELSGA 269
HP+ + + + L FN +++L GA
Sbjct: 267 KHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGA 302
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 26/162 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHY-SSANQRMPLIYVKL 59
++ + H N++ K +S +N L L+MEY+P Y L+ Y +R+ I +
Sbjct: 96 LKSLQHDNIVKYKGVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQ 149
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA---------- 109
YT QI +G+ Y+ T R HRDL +N+LV+ ++VKI DFG K L
Sbjct: 150 YTSQICKGMEYLGT-KRYIHRDLATRNILVEN-ENRVKIGDFGLTKVLPQDKEXXKVKEP 207
Query: 110 GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
GE+ I F+ APE + ++++ + D+WS G VL EL
Sbjct: 208 GESPI------FWYAPESL-TESKFSVASDVWSFGVVLYELF 242
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 113/262 (43%), Gaps = 43/262 (16%)
Query: 2 RVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYT 61
+ +D+P+V+ H FF +++ F+ +V+E R L + + + +
Sbjct: 81 KSLDNPHVVGF-HGFF----EDDDFVYVVLEICRR---RSLLELHKRRKAVTEPEARYFM 132
Query: 62 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICSR 120
Q +G+ Y+H RV HRDLK NL ++ VKI DFG A ++ GE +
Sbjct: 133 RQTIQGVQYLHN-NRVIHRDLKLGNLFLND-DMDVKIGDFGLATKIEFDGERKKDLCGTP 190
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 180
Y APE + ++ +DIWS GC+L LL+G+P F E
Sbjct: 191 NYIAPE-VLCKKGHSFEVDIWSLGCILYTLLVGKPPF----------------------E 227
Query: 181 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
C+ Y +IK + + H + P A L R+L P+LR + E FF
Sbjct: 228 TSCLKETYI-----RIKKNEYSVPRH--INPVASALIRRMLHADPTLRPSVAELLTDEFF 280
Query: 241 DELREPNARLPNG-RPLPPLFN 261
P RLP +PP F+
Sbjct: 281 TSGYAP-MRLPTSCLTVPPRFS 301
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 26/162 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHY-SSANQRMPLIYVKL 59
++ + H N++ K +S +N L L+MEY+P Y L+ Y +R+ I +
Sbjct: 72 LKSLQHDNIVKYKGVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQ 125
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA---------- 109
YT QI +G+ Y+ T R HRDL +N+LV+ ++VKI DFG K L
Sbjct: 126 YTSQICKGMEYLGT-KRYIHRDLATRNILVEN-ENRVKIGDFGLTKVLPQDKEXXKVKEP 183
Query: 110 GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
GE+ I F+ APE + ++++ + D+WS G VL EL
Sbjct: 184 GESPI------FWYAPESL-TESKFSVASDVWSFGVVLYELF 218
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 26/162 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHY-SSANQRMPLIYVKL 59
++ + H N++ K +S +N L L+MEY+P Y L+ Y +R+ I +
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQ 121
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA---------- 109
YT QI +G+ Y+ T R HRDL +N+LV+ ++VKI DFG K L
Sbjct: 122 YTSQICKGMEYLGT-KRYIHRDLATRNILVEN-ENRVKIGDFGLTKVLPQDKEXXKVKEP 179
Query: 110 GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
GE+ I F+ APE + ++++ + D+WS G VL EL
Sbjct: 180 GESPI------FWYAPESL-TESKFSVASDVWSFGVVLYELF 214
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 26/162 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHY-SSANQRMPLIYVKL 59
++ + H N++ K +S +N L L+MEY+P Y L+ Y +R+ I +
Sbjct: 71 LKSLQHDNIVKYKGVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQ 124
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA---------- 109
YT QI +G+ Y+ T R HRDL +N+LV+ ++VKI DFG K L
Sbjct: 125 YTSQICKGMEYLGT-KRYIHRDLATRNILVEN-ENRVKIGDFGLTKVLPQDKEXXKVKEP 182
Query: 110 GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
GE+ I F+ APE + ++++ + D+WS G VL EL
Sbjct: 183 GESPI------FWYAPESL-TESKFSVASDVWSFGVVLYELF 217
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 26/162 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHY-SSANQRMPLIYVKL 59
++ + H N++ K +S +N L L+MEY+P Y L+ Y +R+ I +
Sbjct: 63 LKSLQHDNIVKYKGVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQ 116
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA---------- 109
YT QI +G+ Y+ T R HRDL +N+LV+ ++VKI DFG K L
Sbjct: 117 YTSQICKGMEYLGT-KRYIHRDLATRNILVEN-ENRVKIGDFGLTKVLPQDKEXXKVKEP 174
Query: 110 GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
GE+ I F+ APE + ++++ + D+WS G VL EL
Sbjct: 175 GESPI------FWYAPESL-TESKFSVASDVWSFGVVLYELF 209
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 26/162 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHY-SSANQRMPLIYVKL 59
++ + H N++ K +S +N L L+MEY+P Y L+ Y +R+ I +
Sbjct: 70 LKSLQHDNIVKYKGVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQ 123
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA---------- 109
YT QI +G+ Y+ T R HRDL +N+LV+ ++VKI DFG K L
Sbjct: 124 YTSQICKGMEYLGT-KRYIHRDLATRNILVEN-ENRVKIGDFGLTKVLPQDKEXXKVKEP 181
Query: 110 GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
GE+ I F+ APE + ++++ + D+WS G VL EL
Sbjct: 182 GESPI------FWYAPESL-TESKFSVASDVWSFGVVLYELF 216
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 26/162 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHY-SSANQRMPLIYVKL 59
++ + H N++ K +S +N L L+MEY+P Y L+ Y +R+ I +
Sbjct: 64 LKSLQHDNIVKYKGVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQ 117
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA---------- 109
YT QI +G+ Y+ T R HRDL +N+LV+ ++VKI DFG K L
Sbjct: 118 YTSQICKGMEYLGT-KRYIHRDLATRNILVEN-ENRVKIGDFGLTKVLPQDKEXXKVKEP 175
Query: 110 GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
GE+ I F+ APE + ++++ + D+WS G VL EL
Sbjct: 176 GESPI------FWYAPESL-TESKFSVASDVWSFGVVLYELF 210
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 113/262 (43%), Gaps = 43/262 (16%)
Query: 2 RVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYT 61
+ +D+P+V+ H FF +++ F+ +V+E R L + + + +
Sbjct: 97 KSLDNPHVVGF-HGFF----EDDDFVYVVLEICRR---RSLLELHKRRKAVTEPEARYFM 148
Query: 62 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICSR 120
Q +G+ Y+H RV HRDLK NL ++ VKI DFG A ++ GE +
Sbjct: 149 RQTIQGVQYLHN-NRVIHRDLKLGNLFLND-DMDVKIGDFGLATKIEFDGERKKDLCGTP 206
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 180
Y APE + ++ +DIWS GC+L LL+G+P F E
Sbjct: 207 NYIAPE-VLCKKGHSFEVDIWSLGCILYTLLVGKPPF----------------------E 243
Query: 181 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
C+ Y +IK + + H + P A L R+L P+LR + E FF
Sbjct: 244 TSCLKETYI-----RIKKNEYSVPRH--INPVASALIRRMLHADPTLRPSVAELLTDEFF 296
Query: 241 DELREPNARLPNG-RPLPPLFN 261
P RLP +PP F+
Sbjct: 297 TSGYAP-MRLPTSCLTVPPRFS 317
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 26/162 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHY-SSANQRMPLIYVKL 59
++ + H N++ K +S +N L L+MEY+P Y L+ Y +R+ I +
Sbjct: 69 LKSLQHDNIVKYKGVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQ 122
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA---------- 109
YT QI +G+ Y+ T R HRDL +N+LV+ ++VKI DFG K L
Sbjct: 123 YTSQICKGMEYLGT-KRYIHRDLATRNILVEN-ENRVKIGDFGLTKVLPQDKEXXKVKEP 180
Query: 110 GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
GE+ I F+ APE + ++++ + D+WS G VL EL
Sbjct: 181 GESPI------FWYAPESL-TESKFSVASDVWSFGVVLYELF 215
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 26/162 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHY-SSANQRMPLIYVKL 59
++ + H N++ K +S +N L L+MEY+P Y L+ Y +R+ I +
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQ 118
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA---------- 109
YT QI +G+ Y+ T R HRDL +N+LV+ ++VKI DFG K L
Sbjct: 119 YTSQICKGMEYLGT-KRYIHRDLATRNILVEN-ENRVKIGDFGLTKVLPQDKEXXKVKEP 176
Query: 110 GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
GE+ I F+ APE + ++++ + D+WS G VL EL
Sbjct: 177 GESPI------FWYAPESL-TESKFSVASDVWSFGVVLYELF 211
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 26/162 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHY-SSANQRMPLIYVKL 59
++ + H N++ K +S +N L L+MEY+P Y L+ Y +R+ I +
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQ 118
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA---------- 109
YT QI +G+ Y+ T R HRDL +N+LV+ ++VKI DFG K L
Sbjct: 119 YTSQICKGMEYLGT-KRYIHRDLATRNILVEN-ENRVKIGDFGLTKVLPQDKEFFKVKEP 176
Query: 110 GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
GE+ I F+ APE + ++++ + D+WS G VL EL
Sbjct: 177 GESPI------FWYAPESL-TESKFSVASDVWSFGVVLYELF 211
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 123/282 (43%), Gaps = 58/282 (20%)
Query: 2 RVMDHPNVISLK---------HCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRM 52
R++ HPN++ L + F + ELF ++V ++YS A+
Sbjct: 58 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR----------EYYSEADASH 107
Query: 53 PLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTH--QVKICDFGSAKQLIAG 110
+ QI + + H + + HRDLKP+NLL+ + VK+ DFG A ++
Sbjct: 108 CI-------QQILESVNHCH-LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD 159
Query: 111 E-ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEI 169
+ A + + Y +PE + Y +D+W+ G +L LL+G P F E+ +L +
Sbjct: 160 QQAWFGFAGTPGYLSPE-VLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQ-HRLYQQ 217
Query: 170 IKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC 229
IK DF P+ W V PEA DL +++L +P+ R
Sbjct: 218 IKA--------------GAYDFPSPE-----WDTV-----TPEAKDLINKMLTINPAKRI 253
Query: 230 TALEACAHPFFDELREPNARLPNGRPLPPL--FNFKQELSGA 269
TA EA HP+ + + + + L FN +++L GA
Sbjct: 254 TASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGA 295
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 26/162 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHY-SSANQRMPLIYVKL 59
++ + H N++ K +S +N L L+MEY+P Y L+ Y +R+ I +
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQ 118
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA---------- 109
YT QI +G+ Y+ T R HRDL +N+LV+ ++VKI DFG K L
Sbjct: 119 YTSQICKGMEYLGT-KRYIHRDLATRNILVEN-ENRVKIGDFGLTKVLPQDKEXXKVKEP 176
Query: 110 GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
GE+ I F+ APE + ++++ + D+WS G VL EL
Sbjct: 177 GESPI------FWYAPESL-TESKFSVASDVWSFGVVLYELF 211
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 123/282 (43%), Gaps = 58/282 (20%)
Query: 2 RVMDHPNVISLK---------HCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRM 52
R++ HPN++ L + F + ELF ++V ++YS A+
Sbjct: 58 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR----------EYYSEADASH 107
Query: 53 PLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTH--QVKICDFGSAKQLIAG 110
+ QI + + H + + HRDLKP+NLL+ + VK+ DFG A ++
Sbjct: 108 CI-------QQILESVNHCH-LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD 159
Query: 111 E-ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEI 169
+ A + + Y +PE + Y +D+W+ G +L LL+G P F E+ +L +
Sbjct: 160 QQAWFGFAGTPGYLSPE-VLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQ-HRLYQQ 217
Query: 170 IKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC 229
IK DF P+ W V PEA DL +++L +P+ R
Sbjct: 218 IKA--------------GAYDFPSPE-----WDTV-----TPEAKDLINKMLTINPAKRI 253
Query: 230 TALEACAHPFFDELREPNARLPNGRPLPPL--FNFKQELSGA 269
TA EA HP+ + + + + L FN +++L GA
Sbjct: 254 TASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGA 295
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 26/162 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHY-SSANQRMPLIYVKL 59
++ + H N++ K +S +N L L+MEY+P Y L+ Y +R+ I +
Sbjct: 83 LKSLQHDNIVKYKGVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQ 136
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA---------- 109
YT QI +G+ Y+ T R HRDL +N+LV+ ++VKI DFG K L
Sbjct: 137 YTSQICKGMEYLGT-KRYIHRDLATRNILVEN-ENRVKIGDFGLTKVLPQDKEXXKVKEP 194
Query: 110 GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
GE+ I F+ APE + ++++ + D+WS G VL EL
Sbjct: 195 GESPI------FWYAPESL-TESKFSVASDVWSFGVVLYELF 229
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 26/162 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHY-SSANQRMPLIYVKL 59
++ + H N++ K +S +N L L+MEY+P Y L+ Y +R+ I +
Sbjct: 83 LKSLQHDNIVKYKGVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQ 136
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA---------- 109
YT QI +G+ Y+ T R HRDL +N+LV+ ++VKI DFG K L
Sbjct: 137 YTSQICKGMEYLGT-KRYIHRDLATRNILVEN-ENRVKIGDFGLTKVLPQDKEXXKVKEP 194
Query: 110 GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
GE+ I F+ APE + ++++ + D+WS G VL EL
Sbjct: 195 GESPI------FWYAPESL-TESKFSVASDVWSFGVVLYELF 229
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 113/262 (43%), Gaps = 43/262 (16%)
Query: 2 RVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYT 61
+ +D+P+V+ H FF +++ F+ +V+E R L + + + +
Sbjct: 97 KSLDNPHVVGF-HGFF----EDDDFVYVVLEICRR---RSLLELHKRRKAVTEPEARYFM 148
Query: 62 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICSR 120
Q +G+ Y+H RV HRDLK NL ++ VKI DFG A ++ GE +
Sbjct: 149 RQTIQGVQYLHN-NRVIHRDLKLGNLFLND-DMDVKIGDFGLATKIEFDGERKKXLCGTP 206
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 180
Y APE + ++ +DIWS GC+L LL+G+P F E
Sbjct: 207 NYIAPE-VLCKKGHSFEVDIWSLGCILYTLLVGKPPF----------------------E 243
Query: 181 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
C+ Y +IK + + H + P A L R+L P+LR + E FF
Sbjct: 244 TSCLKETYI-----RIKKNEYSVPRH--INPVASALIRRMLHADPTLRPSVAELLTDEFF 296
Query: 241 DELREPNARLPNG-RPLPPLFN 261
P RLP +PP F+
Sbjct: 297 TSGYAP-MRLPTSCLTVPPRFS 317
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 119/281 (42%), Gaps = 38/281 (13%)
Query: 2 RVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYT 61
R + HPN++ K + T L +VMEY S + + +A R + +
Sbjct: 70 RSLRHPNIVRFKEVILTPT-----HLAIVMEYA--SGGELFERICNAG-RFSEDEARFFF 121
Query: 62 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPL-THQVKICDFGSAKQLIAGEANISYICSR 120
Q+ G++Y H + +VCHRDLK +N L+D ++KICDFG +K + S + +
Sbjct: 122 QQLISGVSYCHAM-QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTP 180
Query: 121 FYRAPELIFGATEYTTSI-DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
Y APE++ EY + D+WS G L +L+G F + I
Sbjct: 181 AYIAPEVLL-KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH-------- 231
Query: 180 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
R +N Y + I PE L SR+ P+ R + E H +
Sbjct: 232 --RILNVQYAIPDYVHIS-------------PECRHLISRIFVADPAKRISIPEIRNHEW 276
Query: 240 FDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPD 280
F L+ A L N + F+ + + G S E + ++I +
Sbjct: 277 F--LKNLPADLMNDNTMTTQFD-ESDQPGQSIEEIMQIIAE 314
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 89/175 (50%), Gaps = 13/175 (7%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQ 63
++HP ++ L + F ++ +L+L L + R+ K + VK Y +
Sbjct: 83 VNHPFIVKLHYAF---QTEGKLYLILDFLRGGDLFTRLSKEVMFTEED-----VKFYLAE 134
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF-Y 122
+ L ++H++ + +RDLKP+N+L+D H +K+ DFG +K+ I E C Y
Sbjct: 135 LALALDHLHSLG-IIYRDLKPENILLDEEGH-IKLTDFGLSKESIDHEKKAYSFCGTVEY 192
Query: 123 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV-LGTP 176
APE++ +T S D WS G ++ E+L G F G++ + + I+K LG P
Sbjct: 193 MAPEVV-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 89/175 (50%), Gaps = 13/175 (7%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQ 63
++HP ++ L + F ++ +L+L L + R+ K + VK Y +
Sbjct: 84 VNHPFIVKLHYAF---QTEGKLYLILDFLRGGDLFTRLSKEVMFTEED-----VKFYLAE 135
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF-Y 122
+ L ++H++ + +RDLKP+N+L+D H +K+ DFG +K+ I E C Y
Sbjct: 136 LALALDHLHSLG-IIYRDLKPENILLDEEGH-IKLTDFGLSKESIDHEKKAYSFCGTVEY 193
Query: 123 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV-LGTP 176
APE++ +T S D WS G ++ E+L G F G++ + + I+K LG P
Sbjct: 194 MAPEVV-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 247
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 113/256 (44%), Gaps = 41/256 (16%)
Query: 9 VISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGL 68
V+SL + + +K+ L L L + + + + Y P Y +I GL
Sbjct: 246 VVSLAYAY---ETKDALCLVLTLMNGGDLKFHI---YHMGQAGFPEARAVFYAAEICCGL 299
Query: 69 AYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPELI 128
+H R+ +RDLKP+N+L+D H ++I D G A + G+ + + Y APE++
Sbjct: 300 EDLHR-ERIVYRDLKPENILLDDHGH-IRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV 357
Query: 129 FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 188
YT S D W+ GC+L E++ GQ F Q + IK REE+ +
Sbjct: 358 -KNERYTFSPDWWALGCLLYEMIAGQSPF------QQRKKKIK------REEVERL---- 400
Query: 189 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDEL 243
+K P + + +R P+A L S+LL P+ R +A E HP F +L
Sbjct: 401 -------VKEVP--EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL 451
Query: 244 REPNARLPNGRPLPPL 259
RL G PP
Sbjct: 452 N--FKRLGAGMLEPPF 465
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 89/175 (50%), Gaps = 13/175 (7%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQ 63
++HP ++ L + F ++ +L+L L + R+ K + VK Y +
Sbjct: 83 VNHPFIVKLHYAF---QTEGKLYLILDFLRGGDLFTRLSKEVMFTEED-----VKFYLAE 134
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF-Y 122
+ L ++H++ + +RDLKP+N+L+D H +K+ DFG +K+ I E C Y
Sbjct: 135 LALALDHLHSLG-IIYRDLKPENILLDEEGH-IKLTDFGLSKESIDHEKKAYSFCGTVEY 192
Query: 123 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV-LGTP 176
APE++ +T S D WS G ++ E+L G F G++ + + I+K LG P
Sbjct: 193 MAPEVV-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 124/283 (43%), Gaps = 60/283 (21%)
Query: 2 RVMDHPNVISLK---------HCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRM 52
R++ HPN++ L + F + ELF ++V ++YS A+
Sbjct: 85 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR----------EYYSEADASH 134
Query: 53 PLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTH--QVKICDFGSAKQLIAG 110
+ +QI + +IH + HRDLKP+NLL+ VK+ DFG A + + G
Sbjct: 135 CI-------HQILESVNHIHQ-HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIE-VQG 185
Query: 111 E--ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVE 168
E A + + Y +PE + Y +DIW+ G +L LL+G P F E+ +L +
Sbjct: 186 EQQAWFGFAGTPGYLSPE-VLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQ-HKLYQ 243
Query: 169 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR 228
IK DF P+ W V PEA +L +++L +P+ R
Sbjct: 244 QIKA--------------GAYDFPSPE-----WDTV-----TPEAKNLINQMLTINPAKR 279
Query: 229 CTALEACAHPFFDELREPNARLPNGRPLPPL--FNFKQELSGA 269
TA +A HP+ + + + + L FN +++L GA
Sbjct: 280 ITADQALKHPWVCQRSTVASMMHRQETVECLRKFNARRKLKGA 322
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 84/162 (51%), Gaps = 26/162 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHY-SSANQRMPLIYVKL 59
++ + H N++ K +S +N L L+ME++P Y L+ Y +R+ I +
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRN---LKLIMEFLP---YGSLREYLQKHKERIDHIKLLQ 121
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA---------- 109
YT QI +G+ Y+ T R HRDL +N+LV+ ++VKI DFG K L
Sbjct: 122 YTSQICKGMEYLGT-KRYIHRDLATRNILVEN-ENRVKIGDFGLTKVLPQDKEXXKVKEP 179
Query: 110 GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
GE+ I F+ APE + ++++ + D+WS G VL EL
Sbjct: 180 GESPI------FWYAPESL-TESKFSVASDVWSFGVVLYELF 214
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 2 RVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYT 61
R + HPN++ K + T L +VMEY S + + +A R + +
Sbjct: 69 RSLRHPNIVRFKEVILTPT-----HLAIVMEYA--SGGELFERICNAG-RFSEDEARFFF 120
Query: 62 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPL-THQVKICDFGSAKQLIAGEANISYICSR 120
Q+ G++Y H + +VCHRDLK +N L+D ++KICDFG +K + S + +
Sbjct: 121 QQLISGVSYCHAM-QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTP 179
Query: 121 FYRAPELIFGATEYTTSI-DIWSAGCVLAELLLG 153
Y APE++ EY + D+WS G L +L+G
Sbjct: 180 AYIAPEVLL-KKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 113/256 (44%), Gaps = 41/256 (16%)
Query: 9 VISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGL 68
V+SL + + +K+ L L L + + + + Y P Y +I GL
Sbjct: 246 VVSLAYAY---ETKDALCLVLTLMNGGDLKFHI---YHMGQAGFPEARAVFYAAEICCGL 299
Query: 69 AYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPELI 128
+H R+ +RDLKP+N+L+D H ++I D G A + G+ + + Y APE++
Sbjct: 300 EDLHR-ERIVYRDLKPENILLDDHGH-IRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV 357
Query: 129 FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 188
YT S D W+ GC+L E++ GQ F Q + IK REE+ +
Sbjct: 358 -KNERYTFSPDWWALGCLLYEMIAGQSPF------QQRKKKIK------REEVERL---- 400
Query: 189 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDEL 243
+K P + + +R P+A L S+LL P+ R +A E HP F +L
Sbjct: 401 -------VKEVP--EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL 451
Query: 244 REPNARLPNGRPLPPL 259
RL G PP
Sbjct: 452 N--FKRLGAGMLEPPF 465
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++++ HP++I L + T + +V+EY ++ Y +RM + +
Sbjct: 63 LKLLRHPHIIKLYDVITTPTD-----IVMVIEYAGGELF----DYIVEKKRMTEDEGRRF 113
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI + Y H ++ HRDLKP+NLL+D VKI DFG + + G + S
Sbjct: 114 FQQIICAIEYCHR-HKIVHRDLKPENLLLDD-NLNVKIADFGLSNIMTDGNFLKTSCGSP 171
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGE 160
Y APE+I G +D+WS G VL +L+G+ F E
Sbjct: 172 NYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDE 211
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 89/175 (50%), Gaps = 20/175 (11%)
Query: 5 DHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQI 64
+HP ++ L CF + E L V+EYV L + +++P + + Y+ +I
Sbjct: 111 NHPFLVGLHSCF-----QTESRLFFVIEYVNGG---DLMFHMQRQRKLPEEHARFYSAEI 162
Query: 65 FRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ-LIAGEANISYICSRFYR 123
L Y+H + +RDLK N+L+D H +K+ D+G K+ L G+ ++ + Y
Sbjct: 163 SLALNYLHERG-IIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDTTSTFCGTPNYI 220
Query: 124 APELIFGATEYTTSIDIWSAGCVLAELLLGQPLF--------PGENAVDQLVEII 170
APE++ G +Y S+D W+ G ++ E++ G+ F P +N D L ++I
Sbjct: 221 APEILRGE-DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 274
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 76/149 (51%), Gaps = 16/149 (10%)
Query: 60 YTYQIFRGLAYIHTVPRVC-HRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYIC 118
Y++Q+ RG+ ++ + R C HRDL +N+L+ + VKICDFG A+ + +
Sbjct: 204 YSFQVARGMEFLSS--RKCIHRDLAARNILLSE-NNVVKICDFGLARDIYKNPDYVRKGD 260
Query: 119 SRF---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIKVLG 174
+R + APE IF Y+T D+WS G +L E+ LG +PG V++ +
Sbjct: 261 TRLPLKWMAPESIFDKI-YSTKSDVWSYGVLLWEIFSLGGSPYPG-------VQMDEDFC 312
Query: 175 TPTREEIRCMNPNYTDFRFPQIKAHPWHK 203
+ RE +R P Y+ QI WH+
Sbjct: 313 SRLREGMRMRAPEYSTPEIYQIMLDCWHR 341
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 106/243 (43%), Gaps = 50/243 (20%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYV--PESMYRVLKHYSSANQRMPLIYVKLYTYQ 63
HP + +LK+ F + L VMEY E + + + +R + Y +
Sbjct: 69 HPFLTALKYAFQTHDR-----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAE 118
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR-FY 122
I L Y+H+ V +RD+K +NL++D H +KI DFG K+ I+ A + C Y
Sbjct: 119 IVSALEYLHSRD-VVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXFCGTPEY 176
Query: 123 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 182
APE + +Y ++D W G V+ E++ G+ F ++ ++L E+I + EEIR
Sbjct: 177 LAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR 228
Query: 183 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR-----CTALEACAH 237
F + + PEA L + LL+ P R A E H
Sbjct: 229 ----------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 266
Query: 238 PFF 240
FF
Sbjct: 267 RFF 269
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 106/243 (43%), Gaps = 50/243 (20%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYV--PESMYRVLKHYSSANQRMPLIYVKLYTYQ 63
HP + +LK+ F + L VMEY E + + + +R + Y +
Sbjct: 64 HPFLTALKYAFQTHDR-----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAE 113
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR-FY 122
I L Y+H+ V +RD+K +NL++D H +KI DFG K+ I+ A + C Y
Sbjct: 114 IVSALEYLHSRD-VVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXFCGTPEY 171
Query: 123 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 182
APE + +Y ++D W G V+ E++ G+ F ++ ++L E+I + EEIR
Sbjct: 172 LAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR 223
Query: 183 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR-----CTALEACAH 237
F + + PEA L + LL+ P R A E H
Sbjct: 224 ----------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261
Query: 238 PFF 240
FF
Sbjct: 262 RFF 264
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 111/251 (44%), Gaps = 53/251 (21%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
+ ++ HP +I + F ++F+ +M+Y+ ++ +L+ +QR P K
Sbjct: 60 LSIVTHPFIIRMWGTF---QDAQQIFM--IMDYIEGGELFSLLR----KSQRFPNPVAKF 110
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISY-IC 118
Y ++ L Y+H+ + +RDLKP+N+L+D H +KI DFG AK + +++Y +C
Sbjct: 111 YAAEVCLALEYLHS-KDIIYRDLKPENILLDKNGH-IKITDFGFAKYV----PDVTYXLC 164
Query: 119 SR-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 177
Y APE++ Y SID WS G ++ E+L G F N + +I+
Sbjct: 165 GTPDYIAPEVV-STKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA----- 218
Query: 178 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA- 236
+ RFP + DL SRL+ S R L+
Sbjct: 219 ------------ELRFPPF------------FNEDVKDLLSRLITRDLSQRLGNLQNGTE 254
Query: 237 ----HPFFDEL 243
HP+F E+
Sbjct: 255 DVKNHPWFKEV 265
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 106/243 (43%), Gaps = 50/243 (20%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYV--PESMYRVLKHYSSANQRMPLIYVKLYTYQ 63
HP + +LK+ F + L VMEY E + + + +R + Y +
Sbjct: 64 HPFLTALKYAFQTHDR-----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAE 113
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR-FY 122
I L Y+H+ V +RD+K +NL++D H +KI DFG K+ I+ A + C Y
Sbjct: 114 IVSALEYLHSRD-VVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXFCGTPEY 171
Query: 123 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 182
APE + +Y ++D W G V+ E++ G+ F ++ ++L E+I + EEIR
Sbjct: 172 LAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR 223
Query: 183 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR-----CTALEACAH 237
F + + PEA L + LL+ P R A E H
Sbjct: 224 ----------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261
Query: 238 PFF 240
FF
Sbjct: 262 RFF 264
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 106/243 (43%), Gaps = 50/243 (20%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYV--PESMYRVLKHYSSANQRMPLIYVKLYTYQ 63
HP + +LK+ F + L VMEY E + + + +R + Y +
Sbjct: 64 HPFLTALKYAFQTHDR-----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAE 113
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR-FY 122
I L Y+H+ V +RD+K +NL++D H +KI DFG K+ I+ A + C Y
Sbjct: 114 IVSALEYLHSRD-VVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXFCGTPEY 171
Query: 123 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 182
APE + +Y ++D W G V+ E++ G+ F ++ ++L E+I + EEIR
Sbjct: 172 LAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR 223
Query: 183 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR-----CTALEACAH 237
F + + PEA L + LL+ P R A E H
Sbjct: 224 ----------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261
Query: 238 PFF 240
FF
Sbjct: 262 RFF 264
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 110/263 (41%), Gaps = 43/263 (16%)
Query: 2 RVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYT 61
R + H +V+ H FF F+ +V+E R L + + + Y
Sbjct: 72 RSLAHQHVVGF-HGFFEDND----FVFVVLELC---RRRSLLELHKRRKALTEPEARYYL 123
Query: 62 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICSR 120
QI G Y+H RV HRDLK NL ++ +VKI DFG A ++ GE + +
Sbjct: 124 RQIVLGCQYLHR-NRVIHRDLKLGNLFLNE-DLEVKIGDFGLATKVEYDGERKKTLCGTP 181
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 180
Y APE + ++ +D+WS GC++ LL+G+P F E
Sbjct: 182 NYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF----------------------E 218
Query: 181 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
C+ Y +IK + + K + P A L ++LQ P+ R T E FF
Sbjct: 219 TSCLKETYL-----RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 271
Query: 241 DELREPNARLP-NGRPLPPLFNF 262
P ARLP +PP F+
Sbjct: 272 TSGYIP-ARLPITCLTIPPXFSI 293
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 106/243 (43%), Gaps = 50/243 (20%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYV--PESMYRVLKHYSSANQRMPLIYVKLYTYQ 63
HP + +LK+ F + L VMEY E + + + +R + Y +
Sbjct: 64 HPFLTALKYAFQTHDR-----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAE 113
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR-FY 122
I L Y+H+ V +RD+K +NL++D H +KI DFG K+ I+ A + C Y
Sbjct: 114 IVSALEYLHSRD-VVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKTFCGTPEY 171
Query: 123 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 182
APE + +Y ++D W G V+ E++ G+ F ++ ++L E+I + EEIR
Sbjct: 172 LAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR 223
Query: 183 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR-----CTALEACAH 237
F + + PEA L + LL+ P R A E H
Sbjct: 224 ----------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261
Query: 238 PFF 240
FF
Sbjct: 262 RFF 264
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 87/173 (50%), Gaps = 16/173 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYV--PESMYRVLKHYSSANQRMPLIYVK 58
+ ++D P ++ H F T + L VMEYV + MY + + + P
Sbjct: 73 LALLDKPPFLTQLHSCFQTVDR----LYFVMEYVNGGDLMYHIQQ---VGKFKEP--QAV 123
Query: 59 LYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ-LIAGEANISYI 117
Y +I GL ++H + +RDLK N+++D H +KI DFG K+ ++ G +
Sbjct: 124 FYAAEISIGLFFLHK-RGIIYRDLKLDNVMLDSEGH-IKIADFGMCKEHMMDGVTTREFC 181
Query: 118 CSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
+ Y APE+I Y S+D W+ G +L E+L GQP F GE+ D+L + I
Sbjct: 182 GTPDYIAPEII-AYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE-DELFQSI 232
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 11/161 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
+R++ HP++I L + SK+E+ + V+EY ++ Y +M + +
Sbjct: 58 LRLLRHPHIIKL---YDVIKSKDEIIM--VIEYAGNELF----DYIVQRDKMSEQEARRF 108
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI + Y H ++ HRDLKP+NLL+D + VKI DFG + + G + S
Sbjct: 109 FQQIISAVEYCHR-HKIVHRDLKPENLLLDEHLN-VKIADFGLSNIMTDGNFLKTSCGSP 166
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 161
Y APE+I G +D+WS G +L +L + F E+
Sbjct: 167 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 207
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 106/243 (43%), Gaps = 50/243 (20%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYV--PESMYRVLKHYSSANQRMPLIYVKLYTYQ 63
HP + +LK+ F + L VMEY E + + + +R + Y +
Sbjct: 64 HPFLTALKYAFQTHDR-----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAE 113
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR-FY 122
I L Y+H+ V +RD+K +NL++D H +KI DFG K+ I+ A + C Y
Sbjct: 114 IVSALEYLHSRD-VVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKTFCGTPEY 171
Query: 123 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 182
APE + +Y ++D W G V+ E++ G+ F ++ ++L E+I + EEIR
Sbjct: 172 LAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR 223
Query: 183 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR-----CTALEACAH 237
F + + PEA L + LL+ P R A E H
Sbjct: 224 ----------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261
Query: 238 PFF 240
FF
Sbjct: 262 RFF 264
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 114/251 (45%), Gaps = 46/251 (18%)
Query: 2 RVMDH----PNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYV 57
+V++H P +++L + F + T L+L+++Y+ + H S +R V
Sbjct: 110 QVLEHIRQSPFLVTLHYAFQTETK-----LHLILDYINGG--ELFTHLSQ-RERFTEHEV 161
Query: 58 KLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISY- 116
++Y +I L ++H + + +RD+K +N+L+D H V + DFG +K+ +A E +Y
Sbjct: 162 QIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVV-LTDFGLSKEFVADETERAYD 219
Query: 117 ICSRF-YRAPELIFGA-TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG 174
C Y AP+++ G + + ++D WS G ++ ELL G F + + EI
Sbjct: 220 FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEI----- 274
Query: 175 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEA 234
+R ++ P +PQ M A DL RLL P R
Sbjct: 275 --SRRILKSEPP------YPQ------------EMSALAKDLIQRLLMKDPKKRL----G 310
Query: 235 CAHPFFDELRE 245
C DE++E
Sbjct: 311 CGPRDADEIKE 321
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 8/163 (4%)
Query: 1 MRVMDHPNVISLKHC--FFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVK 58
M+ ++HPNV+S + + N+L L L MEY R + + ++
Sbjct: 67 MKKLNHPNVVSAREVPDGLQKLAPNDLPL-LAMEYCEGGDLRKYLNQFENCCGLKEGPIR 125
Query: 59 LYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQV--KICDFGSAKQLIAGEANISY 116
I L Y+H R+ HRDLKP+N+++ P ++ KI D G AK+L GE +
Sbjct: 126 TLLSDISSALRYLHE-NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEF 184
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLG-QPLFP 158
+ + Y APEL+ +YT ++D WS G + E + G +P P
Sbjct: 185 VGTLQYLAPELL-EQKKYTVTVDYWSFGTLAFECITGFRPFLP 226
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 8/163 (4%)
Query: 1 MRVMDHPNVISLKHC--FFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVK 58
M+ ++HPNV+S + + N+L L L MEY R + + ++
Sbjct: 66 MKKLNHPNVVSAREVPDGLQKLAPNDLPL-LAMEYCEGGDLRKYLNQFENCCGLKEGPIR 124
Query: 59 LYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQV--KICDFGSAKQLIAGEANISY 116
I L Y+H R+ HRDLKP+N+++ P ++ KI D G AK+L GE +
Sbjct: 125 TLLSDISSALRYLHE-NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEF 183
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLG-QPLFP 158
+ + Y APEL+ +YT ++D WS G + E + G +P P
Sbjct: 184 VGTLQYLAPELL-EQKKYTVTVDYWSFGTLAFECITGFRPFLP 225
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 95/233 (40%), Gaps = 34/233 (14%)
Query: 15 CFFSTTSKNELF----LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAY 70
C F+ T LF + + E S+ + K Q +P + I + L +
Sbjct: 92 CPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEH 151
Query: 71 IHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPELI-- 128
+H+ V HRD+KP N+L++ L QVK CDFG + L+ A + Y APE I
Sbjct: 152 LHSKLSVIHRDVKPSNVLINALG-QVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINP 210
Query: 129 -FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 187
Y+ DIWS G EL + + FP ++ GTP ++
Sbjct: 211 ELNQKGYSVKSDIWSLGITXIELAILR--FPYDS-----------WGTPFQQ-------- 249
Query: 188 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
Q+ P ++ + E +D S+ L+ + R T E HPFF
Sbjct: 250 -----LKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFF 297
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 106/243 (43%), Gaps = 50/243 (20%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYV--PESMYRVLKHYSSANQRMPLIYVKLYTYQ 63
HP + +LK+ F + L VMEY E + + + +R + Y +
Sbjct: 67 HPFLTALKYAFQTHDR-----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAE 116
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR-FY 122
I L Y+H+ V +RD+K +NL++D H +KI DFG K+ I+ A + C Y
Sbjct: 117 IVSALEYLHSRD-VVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKTFCGTPEY 174
Query: 123 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 182
APE + +Y ++D W G V+ E++ G+ F ++ ++L E+I + EEIR
Sbjct: 175 LAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR 226
Query: 183 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR-----CTALEACAH 237
F + + PEA L + LL+ P R A E H
Sbjct: 227 ----------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 264
Query: 238 PFF 240
FF
Sbjct: 265 RFF 267
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 98/224 (43%), Gaps = 23/224 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
+R + H NVI L ++ + + +VMEY M +L S +R P+ Y
Sbjct: 60 LRRLRHKNVIQLVDVLYNEEKQK---MYMVMEYCVCGMQEMLD--SVPEKRFPVCQAHGY 114
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL---IAGEANISYI 117
Q+ GL Y+H+ + H+D+KP NLL+ +KI G A+ L A + +
Sbjct: 115 FCQLIDGLEYLHS-QGIVHKDIKPGNLLLT-TGGTLKISALGVAEALHPFAADDTCRTSQ 172
Query: 118 CSRFYRAPELIFGATEYTT-SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV---- 172
S ++ PE+ G ++ +DIWSAG L + G F G+N I K
Sbjct: 173 GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAI 232
Query: 173 ---LGTPTREEIRCMNPNYTDFRFP--QIKAHPWHKVFHKRMPP 211
G P + ++ M RF QI+ H W F K+ PP
Sbjct: 233 PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSW---FRKKHPP 273
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
+R++ HP++I L + SK+E+ + V+EY ++ Y +M + +
Sbjct: 62 LRLLRHPHIIKL---YDVIKSKDEIIM--VIEYAGNELF----DYIVQRDKMSEQEARRF 112
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI + Y H ++ HRDLKP+NLL+D + VKI DFG + + G + S
Sbjct: 113 FQQIISAVEYCHR-HKIVHRDLKPENLLLDEHLN-VKIADFGLSNIMTDGNFLKTSCGSP 170
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
Y APE+I G +D+WS G +L +L
Sbjct: 171 NYAAPEVISGKLYAGPEVDVWSCGVILYVML 201
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
+R++ HP++I L + SK+E+ + V+EY ++ Y +M + +
Sbjct: 68 LRLLRHPHIIKL---YDVIKSKDEIIM--VIEYAGNELF----DYIVQRDKMSEQEARRF 118
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI + Y H ++ HRDLKP+NLL+D + VKI DFG + + G + S
Sbjct: 119 FQQIISAVEYCHR-HKIVHRDLKPENLLLDEHLN-VKIADFGLSNIMTDGNFLKTSCGSP 176
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
Y APE+I G +D+WS G +L +L
Sbjct: 177 NYAAPEVISGKLYAGPEVDVWSCGVILYVML 207
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 82/162 (50%), Gaps = 10/162 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++HPNVI + S NEL N+V+E + R++KH+ + +P V
Sbjct: 86 LKQLNHPNVIKY---YASFIEDNEL--NIVLELADAGDLSRMIKHFKKQKRLIPERTVWK 140
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE-ANISYIC 118
Y Q+ L ++H+ RV HRD+KP N+ + T VK+ D G + + A S +
Sbjct: 141 YFVQLCSALEHMHS-RRVMHRDIKPANVFITA-TGVVKLGDLGLGRFFSSKTTAAHSLVG 198
Query: 119 SRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGE 160
+ +Y +PE I Y DIWS GC+L E+ Q F G+
Sbjct: 199 TPYYMSPERIH-ENGYNFKSDIWSLGCLLYEMAALQSPFYGD 239
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
+R++ HP++I L + SK+E+ + V+EY ++ Y +M + +
Sbjct: 67 LRLLRHPHIIKL---YDVIKSKDEIIM--VIEYAGNELF----DYIVQRDKMSEQEARRF 117
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI + Y H ++ HRDLKP+NLL+D + VKI DFG + + G + S
Sbjct: 118 FQQIISAVEYCHR-HKIVHRDLKPENLLLDEHLN-VKIADFGLSNIMTDGNFLKTSCGSP 175
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
Y APE+I G +D+WS G +L +L
Sbjct: 176 NYAAPEVISGKLYAGPEVDVWSCGVILYVML 206
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 5 DHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQI 64
+HP ++ L CF + E L V+EYV L + +++P + + Y+ +I
Sbjct: 79 NHPFLVGLHSCF-----QTESRLFFVIEYVNGG---DLMFHMQRQRKLPEEHARFYSAEI 130
Query: 65 FRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ-LIAGEANISYICSRFYR 123
L Y+H + +RDLK N+L+D H +K+ D+G K+ L G+ + + Y
Sbjct: 131 SLALNYLHERG-IIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDTTSXFCGTPNYI 188
Query: 124 APELIFGATEYTTSIDIWSAGCVLAELLLGQPLF--------PGENAVDQLVEII 170
APE++ G +Y S+D W+ G ++ E++ G+ F P +N D L ++I
Sbjct: 189 APEILRGE-DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 242
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 16/173 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYV--PESMYRVLKHYSSANQRMPLIYVK 58
++ + HP ++ L H F T K L V++Y+ E Y + + R +
Sbjct: 93 LKNVKHPFLVGL-HFSFQTADK----LYFVLDYINGGELFYHLQRERCFLEPR-----AR 142
Query: 59 LYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYIC 118
Y +I L Y+H++ + +RDLKP+N+L+D H V + DFG K+ I + S C
Sbjct: 143 FYAAEIASALGYLHSL-NIVYRDLKPENILLDSQGHIV-LTDFGLCKENIEHNSTTSTFC 200
Query: 119 SR-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE++ Y ++D W G VL E+L G P F N + I+
Sbjct: 201 GTPEYLAPEVLH-KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL 252
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 5 DHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQI 64
+HP ++ L CF + E L V+EYV L + +++P + + Y+ +I
Sbjct: 68 NHPFLVGLHSCF-----QTESRLFFVIEYVNGG---DLMFHMQRQRKLPEEHARFYSAEI 119
Query: 65 FRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ-LIAGEANISYICSRFYR 123
L Y+H + +RDLK N+L+D H +K+ D+G K+ L G+ + + Y
Sbjct: 120 SLALNYLHERG-IIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDTTSXFCGTPNYI 177
Query: 124 APELIFGATEYTTSIDIWSAGCVLAELLLGQPLF--------PGENAVDQLVEII 170
APE++ G +Y S+D W+ G ++ E++ G+ F P +N D L ++I
Sbjct: 178 APEILRGE-DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 231
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 5 DHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQI 64
+HP ++ L CF + E L V+EYV L + +++P + + Y+ +I
Sbjct: 64 NHPFLVGLHSCF-----QTESRLFFVIEYVNGG---DLMFHMQRQRKLPEEHARFYSAEI 115
Query: 65 FRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ-LIAGEANISYICSRFYR 123
L Y+H + +RDLK N+L+D H +K+ D+G K+ L G+ + + Y
Sbjct: 116 SLALNYLHERG-IIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDTTSXFCGTPNYI 173
Query: 124 APELIFGATEYTTSIDIWSAGCVLAELLLGQPLF--------PGENAVDQLVEII 170
APE++ G +Y S+D W+ G ++ E++ G+ F P +N D L ++I
Sbjct: 174 APEILRGE-DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 227
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 110/263 (41%), Gaps = 43/263 (16%)
Query: 2 RVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYT 61
R + H +V+ H FF F+ +V+E R L + + + Y
Sbjct: 72 RSLAHQHVVGF-HGFFEDND----FVFVVLELC---RRRSLLELHKRRKALTEPEARYYL 123
Query: 62 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICSR 120
QI G Y+H RV HRDLK NL ++ +VKI DFG A ++ GE + +
Sbjct: 124 RQIVLGCQYLHR-NRVIHRDLKLGNLFLNE-DLEVKIGDFGLATKVEYDGERKKTLCGTP 181
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 180
Y APE + ++ +D+WS GC++ LL+G+P F E
Sbjct: 182 NYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF----------------------E 218
Query: 181 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
C+ Y +IK + + K + P A L ++LQ P+ R T E FF
Sbjct: 219 TSCLKETYL-----RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 271
Query: 241 DELREPNARLP-NGRPLPPLFNF 262
P ARLP +PP F+
Sbjct: 272 TSGYIP-ARLPITCLTIPPRFSI 293
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 110/263 (41%), Gaps = 43/263 (16%)
Query: 2 RVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYT 61
R + H +V+ H FF F+ +V+E R L + + + Y
Sbjct: 76 RSLAHQHVVGF-HGFFEDND----FVFVVLELC---RRRSLLELHKRRKALTEPEARYYL 127
Query: 62 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICSR 120
QI G Y+H RV HRDLK NL ++ +VKI DFG A ++ GE + +
Sbjct: 128 RQIVLGCQYLHR-NRVIHRDLKLGNLFLNE-DLEVKIGDFGLATKVEYDGERKKTLCGTP 185
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 180
Y APE + ++ +D+WS GC++ LL+G+P F E
Sbjct: 186 NYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF----------------------E 222
Query: 181 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
C+ Y +IK + + K + P A L ++LQ P+ R T E FF
Sbjct: 223 TSCLKETYL-----RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 275
Query: 241 DELREPNARLP-NGRPLPPLFNF 262
P ARLP +PP F+
Sbjct: 276 TSGYIP-ARLPITCLTIPPRFSI 297
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 89/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F ++ L +VMEYVP M+ L+ R + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSN-----LYMVMEYVPGGEMFSHLRRIG----RFSEPHARF 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +K+ DFG AK++ + +C
Sbjct: 146 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IKVADFGFAKRV---KGRTWXLCG 200
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 201 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 114/263 (43%), Gaps = 53/263 (20%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ + + F + L++E+ P +Y+ L+ + +++ +++
Sbjct: 72 LRHPNILRMYNYFHDRKR-----IYLMLEFAPRGELYKELQKHGRFDEQRSATFME---- 122
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
++ L Y H +V HRD+KP+NLL+ ++KI DFG + + A +C
Sbjct: 123 ELADALHYCHER-KVIHRDIKPENLLMG-YKGELKIADFGWS--VHAPSLRRRXMCGTLD 178
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y PE+I G T + +D+W AG + E L+G P F + + I+ V
Sbjct: 179 YLPPEMIEGKT-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV--------- 228
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 241
D +FP + + DL S+LL+Y P R HP+
Sbjct: 229 --------DLKFPPF------------LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWV- 267
Query: 242 ELREPNARLPNGRPLPPLFNFKQ 264
+ N+R R LPP++ Q
Sbjct: 268 ---KANSR----RVLPPVYQSTQ 283
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 10/160 (6%)
Query: 2 RVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYT 61
+V++HPN++ L + E L LV EY + Y A+ R +
Sbjct: 68 KVLNHPNIVKLFEVI-----ETEKTLYLVXEYASGGE---VFDYLVAHGRXKEKEARAKF 119
Query: 62 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF 121
QI + Y H + HRDLK +NLL+D +KI DFG + + G ++ +
Sbjct: 120 RQIVSAVQYCHQ-KFIVHRDLKAENLLLDA-DXNIKIADFGFSNEFTFGNKLDAFCGAPP 177
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 161
Y APEL G +D+WS G +L L+ G F G+N
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 114/263 (43%), Gaps = 53/263 (20%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ + + F + L++E+ P +Y+ L+ + +++ +++
Sbjct: 71 LRHPNILRMYNYFHDRKR-----IYLMLEFAPRGELYKELQKHGRFDEQRSATFME---- 121
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
++ L Y H +V HRD+KP+NLL+ ++KI DFG + + A +C
Sbjct: 122 ELADALHYCHER-KVIHRDIKPENLLMG-YKGELKIADFGWS--VHAPSLRRRXMCGTLD 177
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y PE+I G T + +D+W AG + E L+G P F + + I+ V
Sbjct: 178 YLPPEMIEGKT-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV--------- 227
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 241
D +FP + + DL S+LL+Y P R HP+
Sbjct: 228 --------DLKFPPF------------LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWV- 266
Query: 242 ELREPNARLPNGRPLPPLFNFKQ 264
+ N+R R LPP++ Q
Sbjct: 267 ---KANSR----RVLPPVYQSTQ 282
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 90/172 (52%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L++ F ++ L +VMEYVP M+ L+ R + +
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSN-----LYMVMEYVPGGEMFSHLRRIG----RFSEPHARF 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 146 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 200
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 201 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 90/172 (52%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L++ F K+ L +VMEYVP M+ L+ R + +
Sbjct: 95 LQAVNFPFLVKLEYSF-----KDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARF 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 146 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 200
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 201 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 84/173 (48%), Gaps = 15/173 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ + HPN I + C+ E LVMEY S +L+ + Q + + V
Sbjct: 108 LQKLRHPNTIQYRGCYL-----REHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAV--- 159
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
T+ +GLAY+H+ + HRD+K N+L+ VK+ DFGSA I AN ++ +
Sbjct: 160 THGALQGLAYLHS-HNMIHRDVKAGNILLSE-PGLVKLGDFGSAS--IMAPAN-XFVGTP 214
Query: 121 FYRAPELIFGATE--YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIK 171
++ APE+I E Y +D+WS G EL +P NA+ L I +
Sbjct: 215 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 267
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 90/172 (52%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L++ F K+ L +VMEYVP M+ L+ R + +
Sbjct: 95 LQAVNFPFLVKLEYSF-----KDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARF 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 146 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 200
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 201 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 104/242 (42%), Gaps = 41/242 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ + H ++ L H + N++F+ V+EY P L Y + R+ ++
Sbjct: 62 LKNLRHQHICQLYHVL---ETANKIFM--VLEYCPGGE---LFDYIISQDRLSEEETRVV 113
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG-SAKQLIAGEANISYICS 119
QI +AY+H+ HRDLKP+NLL D H++K+ DFG AK + ++ C
Sbjct: 114 FRQIVSAVAYVHS-QGYAHRDLKPENLLFDEY-HKLKLIDFGLCAKPKGNKDYHLQTCCG 171
Query: 120 RF-YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 178
Y APELI G + + D+WS G +L L+ G F +N + +I++
Sbjct: 172 SLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMR------- 224
Query: 179 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHP 238
+ P K + P +I L ++LQ P R + HP
Sbjct: 225 ----------GKYDVP------------KWLSPSSILLLQQMLQVDPKKRISMKNLLNHP 262
Query: 239 FF 240
+
Sbjct: 263 WI 264
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 121/282 (42%), Gaps = 58/282 (20%)
Query: 2 RVMDHPNVISLK---------HCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRM 52
R++ H N++ L + F + ELF ++V ++YS A+
Sbjct: 58 RLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR----------EYYSEADASH 107
Query: 53 PLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTH--QVKICDFGSAKQLIAG 110
+ QI + + H + V HRDLKP+NLL+ VK+ DFG A ++
Sbjct: 108 CI-------QQILEAVLHCHQMG-VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGD 159
Query: 111 E-ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEI 169
+ A + + Y +PE + Y +DIW+ G +L LL+G P F E+ +L +
Sbjct: 160 QQAWFGFAGTPGYLSPE-VLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQ-HKLYQQ 217
Query: 170 IKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC 229
IK DF P+ W V PEA +L +++L +P+ R
Sbjct: 218 IKA--------------GAYDFPSPE-----WDTV-----TPEAKNLINQMLTINPAKRI 253
Query: 230 TALEACAHPFFDELREPNARLPNGRPLPPL--FNFKQELSGA 269
TA EA HP+ + + + + L FN +++L GA
Sbjct: 254 TAHEALKHPWVCQRSTVASMMHRQETVECLKKFNARRKLKGA 295
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 114/263 (43%), Gaps = 53/263 (20%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKLYTY 62
+ HPN++ + + F + L++E+ P +Y+ L+ + +++ +++
Sbjct: 71 LRHPNILRMYNYFHDRKR-----IYLMLEFAPRGELYKELQKHGRFDEQRSATFME---- 121
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
++ L Y H +V HRD+KP+NLL+ ++KI DFG + + A +C
Sbjct: 122 ELADALHYCHER-KVIHRDIKPENLLMG-YKGELKIADFGWS--VHAPSLRRRXMCGTLD 177
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y PE+I G T + +D+W AG + E L+G P F + + I+ V
Sbjct: 178 YLPPEMIEGKT-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV--------- 227
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 241
D +FP + + DL S+LL+Y P R HP+
Sbjct: 228 --------DLKFPPF------------LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWV- 266
Query: 242 ELREPNARLPNGRPLPPLFNFKQ 264
+ N+R R LPP++ Q
Sbjct: 267 ---KANSR----RVLPPVYQSTQ 282
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
+++ HP++I L + T +VMEYV L Y + R+ + +
Sbjct: 65 LKLFRHPHIIKLYQVISTPTD-----FFMVMEYVSGGE---LFDYICKHGRVEEMEARRL 116
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI + Y H V HRDLKP+N+L+D KI DFG + + GE + S
Sbjct: 117 FQQILSAVDYCHR-HMVVHRDLKPENVLLDAHM-NAKIADFGLSNMMSDGEFLRTSCGSP 174
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENA 162
Y APE+I G +DIWS G +L LL G F E+
Sbjct: 175 NYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV 216
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 118/281 (41%), Gaps = 38/281 (13%)
Query: 2 RVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYT 61
R + HPN++ K + T L +VMEY S + + +A R + +
Sbjct: 70 RSLRHPNIVRFKEVILTPT-----HLAIVMEYA--SGGELFERICNAG-RFSEDEARFFF 121
Query: 62 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPL-THQVKICDFGSAKQLIAGEANISYICSR 120
Q+ G++Y H + +VCHRDLK +N L+D ++KIC FG +K + S + +
Sbjct: 122 QQLISGVSYCHAM-QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTP 180
Query: 121 FYRAPELIFGATEYTTSI-DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
Y APE++ EY + D+WS G L +L+G F + I
Sbjct: 181 AYIAPEVLL-KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH-------- 231
Query: 180 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
R +N Y + I PE L SR+ P+ R + E H +
Sbjct: 232 --RILNVQYAIPDYVHIS-------------PECRHLISRIFVADPAKRISIPEIRNHEW 276
Query: 240 FDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPD 280
F L+ A L N + F+ + + G S E + ++I +
Sbjct: 277 F--LKNLPADLMNDNTMTTQFD-ESDQPGQSIEEIMQIIAE 314
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 84/173 (48%), Gaps = 15/173 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ + HPN I + C+ E LVMEY S +L+ + Q + + V
Sbjct: 69 LQKLRHPNTIQYRGCYL-----REHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAV--- 120
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
T+ +GLAY+H+ + HRD+K N+L+ VK+ DFGSA I AN ++ +
Sbjct: 121 THGALQGLAYLHS-HNMIHRDVKAGNILLSE-PGLVKLGDFGSAS--IMAPAN-XFVGTP 175
Query: 121 FYRAPELIFGATE--YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIK 171
++ APE+I E Y +D+WS G EL +P NA+ L I +
Sbjct: 176 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 228
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 109/263 (41%), Gaps = 43/263 (16%)
Query: 2 RVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYT 61
R + H +V+ H FF F+ +V+E R L + + + Y
Sbjct: 96 RSLAHQHVVGF-HGFFEDND----FVFVVLELC---RRRSLLELHKRRKALTEPEARYYL 147
Query: 62 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICSR 120
QI G Y+H RV HRDLK NL ++ +VKI DFG A ++ GE +
Sbjct: 148 RQIVLGCQYLHR-NRVIHRDLKLGNLFLNE-DLEVKIGDFGLATKVEYDGERKKVLCGTP 205
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 180
Y APE + ++ +D+WS GC++ LL+G+P F E
Sbjct: 206 NYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF----------------------E 242
Query: 181 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
C+ Y +IK + + K + P A L ++LQ P+ R T E FF
Sbjct: 243 TSCLKETYL-----RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 295
Query: 241 DELREPNARLP-NGRPLPPLFNF 262
P ARLP +PP F+
Sbjct: 296 TSGYIP-ARLPITCLTIPPRFSI 317
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 108/262 (41%), Gaps = 43/262 (16%)
Query: 2 RVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYT 61
R + H +V+ H FF F+ +V+E R L + + + Y
Sbjct: 70 RSLAHQHVVGF-HGFFEDND----FVFVVLELCRR---RSLLELHKRRKALTEPEARYYL 121
Query: 62 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR- 120
QI G Y+H RV HRDLK NL ++ +VKI DFG A ++ +C
Sbjct: 122 RQIVLGCQYLHR-NRVIHRDLKLGNLFLNE-DLEVKIGDFGLATKVEYDGERKKVLCGTP 179
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 180
Y APE + ++ +D+WS GC++ LL+G+P F E
Sbjct: 180 NYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF----------------------E 216
Query: 181 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
C+ Y +IK + + K + P A L ++LQ P+ R T E FF
Sbjct: 217 TSCLKETYL-----RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 269
Query: 241 DELREPNARLP-NGRPLPPLFN 261
P ARLP +PP F+
Sbjct: 270 TSGYIP-ARLPITCLTIPPRFS 290
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 109/263 (41%), Gaps = 43/263 (16%)
Query: 2 RVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYT 61
R + H +V+ H FF F+ +V+E R L + + + Y
Sbjct: 94 RSLAHQHVVGF-HGFFEDND----FVFVVLELC---RRRSLLELHKRRKALTEPEARYYL 145
Query: 62 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICSR 120
QI G Y+H RV HRDLK NL ++ +VKI DFG A ++ GE +
Sbjct: 146 RQIVLGCQYLHR-NRVIHRDLKLGNLFLNE-DLEVKIGDFGLATKVEYDGERKKVLCGTP 203
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 180
Y APE + ++ +D+WS GC++ LL+G+P F E
Sbjct: 204 NYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF----------------------E 240
Query: 181 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
C+ Y +IK + + K + P A L ++LQ P+ R T E FF
Sbjct: 241 TSCLKETYL-----RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 293
Query: 241 DELREPNARLP-NGRPLPPLFNF 262
P ARLP +PP F+
Sbjct: 294 TSGYIP-ARLPITCLTIPPRFSI 315
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 73/162 (45%), Gaps = 10/162 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
+++ HP++I L + T +VMEYV L Y + R+ + +
Sbjct: 65 LKLFRHPHIIKLYQVISTPTD-----FFMVMEYVSGGE---LFDYICKHGRVEEMEARRL 116
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI + Y H V HRDLKP+N+L+D KI DFG + + GE S
Sbjct: 117 FQQILSAVDYCHR-HMVVHRDLKPENVLLDAHM-NAKIADFGLSNMMSDGEFLRDSCGSP 174
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENA 162
Y APE+I G +DIWS G +L LL G F E+
Sbjct: 175 NYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV 216
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 108/256 (42%), Gaps = 46/256 (17%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
+R + HPN+I+L F +N+ + L++E V ++ L S + ++K
Sbjct: 62 LREIRHPNIITLHDIF-----ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLK- 115
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLV------DPLTHQVKICDFGSAKQLIAGEAN 113
QI G+ Y+H+ R+ H DLKP+N+++ +P ++K+ DFG A ++ AG
Sbjct: 116 ---QILDGVHYLHS-KRIAHFDLKPENIMLLDKNVPNP---RIKLIDFGIAHKIEAGNEF 168
Query: 114 ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 173
+ + + APE++ D+WS G + LL G F GE + L I V
Sbjct: 169 KNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAV- 226
Query: 174 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 233
NY DF + + A D RLL P R T +
Sbjct: 227 -------------NY-DF----------DEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQ 262
Query: 234 ACAHPFFDELREPNAR 249
+ H + +R N R
Sbjct: 263 SLEHSWIKAIRRRNVR 278
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 106/246 (43%), Gaps = 36/246 (14%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
+R HPN+I+LK + ++L + E + ++L+ + + +
Sbjct: 75 LRYGQHPNIITLKDVY---DDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVL---- 127
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLL-VDPLTHQ--VKICDFGSAKQLIAGEANISYI 117
+ I + + Y+H+ V HRDLKP N+L VD + ++ICDFG AKQL A +
Sbjct: 128 -HTIGKTVEYLHS-QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP 185
Query: 118 C-SRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
C + + APE + Y DIWS G +L +L G F D EI+ +G+
Sbjct: 186 CYTANFVAPE-VLKRQGYDEGCDIWSLGILLYTMLAGYTPF-ANGPSDTPEEILTRIGSG 243
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 236
+F + W+ V A DL S++L P R TA +
Sbjct: 244 ---------------KFT-LSGGNWNTV-----SETAKDLVSKMLHVDPHQRLTAKQVLQ 282
Query: 237 HPFFDE 242
HP+ +
Sbjct: 283 HPWVTQ 288
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 89/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F ++ L +VMEY+P M+ L+ R + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSN-----LYMVMEYMPGGDMFSHLRRIG----RFSEPHARF 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +K+ DFG AK++ + +C
Sbjct: 146 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IKVADFGFAKRV---KGRTWXLCG 200
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 201 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 89/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F ++ L +VMEY+P M+ L+ R + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSN-----LYMVMEYMPGGDMFSHLRRIG----RFSEPHARF 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +K+ DFG AK++ + +C
Sbjct: 146 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IKVADFGFAKRV---KGRTWXLCG 200
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 201 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 119/277 (42%), Gaps = 44/277 (15%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVP--ESMYRVL-KHYSSANQRMPLIYVKLY 60
+ HPN+I LK F + T ++LV+E V E R++ K Y S +R VK
Sbjct: 105 LSHPNIIKLKEIFETPTE-----ISLVLELVTGGELFDRIVEKGYYS--ERDAADAVK-- 155
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLL-VDPLTHQ-VKICDFGSAKQLIAGEANISYIC 118
QI +AY+H + HRDLKP+NLL P +KI DFG +K ++ + + +C
Sbjct: 156 --QILEAVAYLHE-NGIVHRDLKPENLLYATPAPDAPLKIADFGLSK-IVEHQVLMKTVC 211
Query: 119 SR-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 177
Y APE++ G Y +D+WS G + LL G F E DQ +
Sbjct: 212 GTPGYCAPEILRGCA-YGPEVDMWSVGIITYILLCGFEPFYDERG-DQFM---------F 260
Query: 178 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
R + C ++ F PW + A DL +L+ P R T +A H
Sbjct: 261 RRILNC------EYYF----ISPW----WDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306
Query: 238 PFFDELREPNARLPNGRPLPPLFNFKQELSGASPELV 274
P+ + + FN +++L A +V
Sbjct: 307 PWVTGKAANFVHMDTAQKKLQEFNARRKLKAAVKAVV 343
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 89/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F K+ L +VMEYVP M+ L+ R + +
Sbjct: 116 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARF 166
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 167 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 221
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 222 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 271
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 108/246 (43%), Gaps = 36/246 (14%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
+R HPN+I+LK + ++L + E + ++L+ + + + L+
Sbjct: 75 LRYGQHPNIITLKDVY---DDGKHVYLVTELMRGGELLDKILRQKFFSEREASFV---LH 128
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLL-VDPLTHQ--VKICDFGSAKQLIAGEANISYI 117
T I + + Y+H+ V HRDLKP N+L VD + ++ICDFG AKQL A +
Sbjct: 129 T--IGKTVEYLHS-QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP 185
Query: 118 C-SRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
C + + APE + Y DIWS G +L +L G F D EI+ +G+
Sbjct: 186 CYTANFVAPE-VLKRQGYDEGCDIWSLGILLYTMLAGYTPF-ANGPSDTPEEILTRIGSG 243
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 236
+F + W+ V A DL S++L P R TA +
Sbjct: 244 ---------------KFT-LSGGNWNTV-----SETAKDLVSKMLHVDPHQRLTAKQVLQ 282
Query: 237 HPFFDE 242
HP+ +
Sbjct: 283 HPWVTQ 288
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 89/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F ++ L +VMEYVP M+ L+ R + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSN-----LYMVMEYVPGGEMFSHLRRIG----RFSEPHARF 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 146 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 200
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 201 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 89/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F K+ L +VMEYVP M+ L+ R + +
Sbjct: 96 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARF 146
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 147 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 201
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 202 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 89/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F K+ L +VMEYVP M+ L+ R + +
Sbjct: 95 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARF 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 146 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 200
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 201 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 89/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F K+ L +VMEYVP M+ L+ R + +
Sbjct: 96 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARF 146
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 147 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 201
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 202 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 89/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F ++ L +VMEYVP M+ L+ R + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSN-----LYMVMEYVPGGEMFSHLRRIG----RFSEPHARF 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 146 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 200
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 201 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 89/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F K+ L +VMEYVP M+ L+ R + +
Sbjct: 96 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARF 146
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 147 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 201
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 202 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 89/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F K+ L +VMEYVP M+ L+ R + +
Sbjct: 96 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARF 146
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 147 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 201
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 202 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 89/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F K+ L +VMEYVP M+ L+ R + +
Sbjct: 88 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARF 138
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 139 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 193
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 194 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 243
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 97/238 (40%), Gaps = 39/238 (16%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVL-KHYSSANQRMPLIYVKLYTYQI 64
HPN+++L + S L+L + + E R++ K + + LI+ Q+
Sbjct: 75 HPNIVALDDIY---ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF------QV 125
Query: 65 FRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKI--CDFGSAKQLIAGEANISYICSRFY 122
+ Y+H + + HRDLKP+NLL L KI DFG +K G + + Y
Sbjct: 126 LDAVKYLHDLG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGY 184
Query: 123 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 182
APE + Y+ ++D WS G + LL G P F EN +I+K E
Sbjct: 185 VAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA-------EYE 236
Query: 183 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
+P + D + A D L++ P R T +A HP+
Sbjct: 237 FDSPYWDD------------------ISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 83/179 (46%), Gaps = 23/179 (12%)
Query: 28 NLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNL 87
N + Y PE +Y+ + L ++ Y++Q+ +G+ ++ + + HRDL +N+
Sbjct: 130 NEFVPYKPEDLYKDF---------LTLEHLIXYSFQVAKGMEFLASRKXI-HRDLAARNI 179
Query: 88 LVDPLTHQVKICDFGSAKQLIAGEANISYICSRF---YRAPELIFGATEYTTSIDIWSAG 144
L+ + VKICDFG A+ + + +R + APE IF YT D+WS G
Sbjct: 180 LLSE-KNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFG 237
Query: 145 CVLAELL-LGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 202
+L E+ LG +PG V+I + +E R P+YT Q WH
Sbjct: 238 VLLWEIFSLGASPYPG-------VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 289
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 89/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F ++ L +VMEYVP M+ L+ R + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSN-----LYMVMEYVPGGEMFSHLRRIG----RFXEPHARF 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 146 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 200
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 201 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 122/304 (40%), Gaps = 60/304 (19%)
Query: 2 RVMDHPNVI---------SLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRM 52
R + HPN++ S + F + ELF ++V + YS A+
Sbjct: 83 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR----------EFYSEADASH 132
Query: 53 PLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTH--QVKICDFGSAKQLIAG 110
+ QI +AY H+ + HR+LKP+NLL+ VK+ DFG A ++
Sbjct: 133 CI-------QQILESIAYCHS-NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184
Query: 111 EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
EA + + Y +PE + Y+ +DIW+ G +L LL+G P F E+ +I
Sbjct: 185 EAWHGFAGTPGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI- 242
Query: 171 KVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 230
D+ P+ W V PEA L +L +P R T
Sbjct: 243 --------------KAGAYDYPSPE-----WDTV-----TPEAKSLIDSMLTVNPKKRIT 278
Query: 231 ALEACAHPFFDELREPNARLPNGRPLPPL--FNFKQELSGASPELVNKLIPDHVKRQLGL 288
A +A P+ + + + L FN +++L GA ++ +I LG
Sbjct: 279 ADQALKVPWICNRERVASAIHRQDTVDCLKKFNARRKLKGA---ILTTMIATRNLSNLGR 335
Query: 289 NFLH 292
N L+
Sbjct: 336 NLLN 339
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 89/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F K+ L +VMEYVP M+ L+ R + +
Sbjct: 96 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARF 146
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 147 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWTLCG 201
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 202 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 89/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F ++ L +VMEYVP M+ L+ R + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSN-----LYMVMEYVPGGEMFSHLRRIG----RFXEPHARF 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 146 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 200
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 201 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 89/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F ++ L +VMEYVP M+ L+ R + +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSN-----LYMVMEYVPGGEMFSHLRRIG----RFXEPHARF 146
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 147 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 201
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 202 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 74/164 (45%), Gaps = 12/164 (7%)
Query: 14 HCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHT 73
CF + + ++F+ ME + ++ K +P + T I + L Y+
Sbjct: 88 QCFGTFITNTDVFI--AMELMGTCAEKLKKRMQGP---IPERILGKMTVAIVKALYYLKE 142
Query: 74 VPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPELIF---- 129
V HRD+KP N+L+D Q+K+CDFG + +L+ +A Y APE I
Sbjct: 143 KHGVIHRDVKPSNILLDE-RGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDP 201
Query: 130 GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 173
+Y D+WS G L EL GQ FP +N + KVL
Sbjct: 202 TKPDYDIRADVWSLGISLVELATGQ--FPYKNCKTDFEVLTKVL 243
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 22/171 (12%)
Query: 3 VMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKLYT 61
++ HPN+I+L+ E L LVME+ + RVL + +R+P + +
Sbjct: 62 MLKHPNIIALRGVCL-----KEPNLCLVMEFARGGPLNRVL-----SGKRIPPDILVNWA 111
Query: 62 YQIFRGLAYIH--TVPRVCHRDLKPQNLLV-------DPLTHQVKICDFGSAKQLIAGEA 112
QI RG+ Y+H + + HRDLK N+L+ D +KI DFG A++
Sbjct: 112 VQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW-HRTT 170
Query: 113 NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV 163
+S + + APE+I A+ ++ D+WS G +L ELL G+ F G + +
Sbjct: 171 KMSAAGAYAWMAPEVIR-ASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL 220
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 97/238 (40%), Gaps = 39/238 (16%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVL-KHYSSANQRMPLIYVKLYTYQI 64
HPN+++L + S L+L + + E R++ K + + LI+ Q+
Sbjct: 75 HPNIVALDDIY---ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF------QV 125
Query: 65 FRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKI--CDFGSAKQLIAGEANISYICSRFY 122
+ Y+H + + HRDLKP+NLL L KI DFG +K G + + Y
Sbjct: 126 LDAVKYLHDLG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGY 184
Query: 123 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 182
APE + Y+ ++D WS G + LL G P F EN +I+K E
Sbjct: 185 VAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA-------EYE 236
Query: 183 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
+P + D + A D L++ P R T +A HP+
Sbjct: 237 FDSPYWDD------------------ISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 89/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F K+ L +VMEYVP M+ L+ R + +
Sbjct: 88 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIG----RFXEPHARF 138
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 139 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 193
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 194 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 243
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 115/253 (45%), Gaps = 45/253 (17%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVP--ESMYRVLKHYSSANQRMPLIYVK 58
+R HPN+I+LK + + ++ +V E + E + ++L+ + + +
Sbjct: 70 LRYGQHPNIITLKDVY-----DDGKYVYVVTELMKGGELLDKILRQKFFSEREASAV--- 121
Query: 59 LYTYQIFRGLAYIHTVPRVCHRDLKPQNLL-VDPLTH--QVKICDFGSAKQLIAGEANIS 115
L+T I + + Y+H V HRDLKP N+L VD + ++ICDFG AKQL A +
Sbjct: 122 LFT--ITKTVEYLH-AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLM 178
Query: 116 YIC-SRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLG-QPLFPGENAVDQLVEIIKVL 173
C + + APE + Y + DIWS G +L +L G P G + D EI+ +
Sbjct: 179 TPCYTANFVAPE-VLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD--DTPEEILARI 235
Query: 174 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 233
G+ +F + W+ V A DL S++L P R TA
Sbjct: 236 GSG---------------KF-SLSGGYWNSV-----SDTAKDLVSKMLHVDPHQRLTAAL 274
Query: 234 ACAHPF---FDEL 243
HP+ +D+L
Sbjct: 275 VLRHPWIVHWDQL 287
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 89/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F K+ L +VMEYVP M+ L+ R + +
Sbjct: 81 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARF 131
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 132 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWTLCG 186
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 187 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 236
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 113/258 (43%), Gaps = 55/258 (21%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSAN-QRMPLIYVKLYT 61
+ HPN++ L + F+ + L++EY P +Y+ L+ + + QR I +L
Sbjct: 80 LHHPNILRLYNYFYDRRR-----IYLILEYAPRGELYKELQKSCTFDEQRTATIMEELAD 134
Query: 62 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF 121
L Y H +V HRD+KP+NLL+ ++KI DFG + + A +C
Sbjct: 135 -----ALMYCHG-KKVIHRDIKPENLLLGLKG-ELKIADFGWS--VHAPSLRRKTMCGTL 185
Query: 122 -YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 180
Y PE+I G + +D+W G + ELL+G P F + + I+KV
Sbjct: 186 DYLPPEMIEGRM-HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKV-------- 236
Query: 181 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
D +FP +P A DL S+LL+++PS R + AHP+
Sbjct: 237 ---------DLKFPA------------SVPTGAQDLISKLLRHNPSERLPLAQVSAHPW- 274
Query: 241 DELREPNARLPNGRPLPP 258
R + R LPP
Sbjct: 275 -------VRANSRRVLPP 285
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 117/281 (41%), Gaps = 38/281 (13%)
Query: 2 RVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYT 61
R + HPN++ K + T L +VMEY S + + +A R + +
Sbjct: 70 RSLRHPNIVRFKEVILTPT-----HLAIVMEYA--SGGELFERICNAG-RFSEDEARFFF 121
Query: 62 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPL-THQVKICDFGSAKQLIAGEANISYICSR 120
Q+ G++Y H + +VCHRDLK +N L+D ++KIC FG +K + + +
Sbjct: 122 QQLISGVSYCHAM-QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTP 180
Query: 121 FYRAPELIFGATEYTTSI-DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
Y APE++ EY + D+WS G L +L+G F + I
Sbjct: 181 AYIAPEVLL-KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH-------- 231
Query: 180 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
R +N Y + I PE L SR+ P+ R + E H +
Sbjct: 232 --RILNVQYAIPDYVHIS-------------PECRHLISRIFVADPAKRISIPEIRNHEW 276
Query: 240 FDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPD 280
F L+ A L N + F+ + + G S E + ++I +
Sbjct: 277 F--LKNLPADLMNDNTMTTQFD-ESDQPGQSIEEIMQIIAE 314
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 88/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F K+ L +VMEY P M+ L+ R + +
Sbjct: 96 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYAPGGEMFSHLRRIG----RFSEPHARF 146
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NL++D + +K+ DFG AK++ + +C
Sbjct: 147 YAAQIVLTFEYLHSLD-LIYRDLKPENLMIDQQGY-IKVTDFGFAKRV---KGRTWXLCG 201
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 202 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 88/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F ++ L +VMEY P M+ L+ R + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSN-----LYMVMEYAPGGEMFSHLRRIG----RFSEPHARF 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NL++D + +K+ DFG AK++ + +C
Sbjct: 146 YAAQIVLTFEYLHSLD-LIYRDLKPENLMIDQQGY-IKVTDFGFAKRV---KGRTWXLCG 200
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 201 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 97/238 (40%), Gaps = 39/238 (16%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVL-KHYSSANQRMPLIYVKLYTYQI 64
HPN+++L + S L+L + + E R++ K + + LI+ Q+
Sbjct: 75 HPNIVALDDIY---ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF------QV 125
Query: 65 FRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKI--CDFGSAKQLIAGEANISYICSRFY 122
+ Y+H + + HRDLKP+NLL L KI DFG +K G + + Y
Sbjct: 126 LDAVKYLHDLG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGY 184
Query: 123 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 182
APE + Y+ ++D WS G + LL G P F EN +I+K E
Sbjct: 185 VAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA-------EYE 236
Query: 183 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
+P + D + A D L++ P R T +A HP+
Sbjct: 237 FDSPYWDD------------------ISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 97/238 (40%), Gaps = 39/238 (16%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVL-KHYSSANQRMPLIYVKLYTYQI 64
HPN+++L + S L+L + + E R++ K + + LI+ Q+
Sbjct: 75 HPNIVALDDIY---ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF------QV 125
Query: 65 FRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKI--CDFGSAKQLIAGEANISYICSRFY 122
+ Y+H + + HRDLKP+NLL L KI DFG +K G + + Y
Sbjct: 126 LDAVKYLHDLG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGY 184
Query: 123 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 182
APE + Y+ ++D WS G + LL G P F EN +I+K E
Sbjct: 185 VAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA-------EYE 236
Query: 183 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
+P + D + A D L++ P R T +A HP+
Sbjct: 237 FDSPYWDD------------------ISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 103/246 (41%), Gaps = 44/246 (17%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVP--ESMYRVLKHYSSANQRMPLIYVK 58
++ + H N+++L+ + STT LVM+ V E R+L+ + L+
Sbjct: 60 LKKIKHENIVTLEDIYESTTH-----YYLVMQLVSGGELFDRILERGVYTEKDASLV--- 111
Query: 59 LYTYQIFRGLAYIHTVPRVCHRDLKPQNLL--VDPLTHQVKICDFGSAKQLIAGEANISY 116
Q+ + Y+H + HRDLKP+NLL ++ I DFG +K G +S
Sbjct: 112 --IQQVLSAVKYLHE-NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG--IMST 166
Query: 117 ICSR-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 175
C Y APE + Y+ ++D WS G + LL G P F E +L E IK
Sbjct: 167 ACGTPGYVAPE-VLAQKPYSKAVDCWSIGVITYILLCGYPPFY-EETESKLFEKIK---- 220
Query: 176 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
Y +F P F + A D LL+ P+ R T +A
Sbjct: 221 ----------EGYYEFESP----------FWDDISESAKDFICHLLEKDPNERYTCEKAL 260
Query: 236 AHPFFD 241
+HP+ D
Sbjct: 261 SHPWID 266
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 88/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F ++ L +VMEY P M+ L+ R + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSN-----LYMVMEYAPGGEMFSHLRRIG----RFSEPHARF 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NL++D + +K+ DFG AK++ + +C
Sbjct: 146 YAAQIVLTFEYLHSLD-LIYRDLKPENLMIDQQGY-IKVTDFGLAKRV---KGRTWXLCG 200
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 201 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 88/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F ++ L +VMEY P M+ L+ R + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSN-----LYMVMEYAPGGEMFSHLRRIG----RFXEPHARF 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NL++D + +K+ DFG AK++ + +C
Sbjct: 146 YAAQIVLTFEYLHSLD-LIYRDLKPENLMIDQQGY-IKVTDFGFAKRV---KGRTWXLCG 200
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 201 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 102/243 (41%), Gaps = 39/243 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVL-KHYSSANQRMPLIYVKL 59
+R + H N+++L+ + S N L+L + + E R++ K + + LI
Sbjct: 74 LRKIKHENIVALEDIY---ESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIR--- 127
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKI--CDFGSAKQLIAGEANISYI 117
Q+ + Y+H + + HRDLKP+NLL + KI DFG +K G+ +
Sbjct: 128 ---QVLDAVYYLHRMG-IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTAC 183
Query: 118 CSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 177
+ Y APE + Y+ ++D WS G + LL G P F EN +I+K
Sbjct: 184 GTPGYVAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKA----- 237
Query: 178 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
E +P + D + A D L++ P+ R T +A H
Sbjct: 238 --EYEFDSPYWDD------------------ISDSAKDFIRNLMEKDPNKRYTCEQAARH 277
Query: 238 PFF 240
P+
Sbjct: 278 PWI 280
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 15/171 (8%)
Query: 2 RVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKLY 60
R++ N L FS + L++ VMEY P M+ L+ R + + Y
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLYM--VMEYAPGGEMFSHLRRIG----RFSEPHARFY 147
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI Y+H++ + +RDLKP+NL++D + +K+ DFG AK++ + +C
Sbjct: 148 AAQIVLTFEYLHSLD-LIYRDLKPENLMIDQQGY-IKVTDFGFAKRV---KGRTWXLCGT 202
Query: 121 -FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 203 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 15/171 (8%)
Query: 2 RVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKLY 60
R++ N L FS + L++ VMEY P M+ L+ R + + Y
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLYM--VMEYAPGGEMFSHLRRIG----RFSEPHARFY 147
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI Y+H++ + +RDLKP+NL++D + +K+ DFG AK++ + +C
Sbjct: 148 AAQIVLTFEYLHSLD-LIYRDLKPENLMIDQQGY-IKVTDFGFAKRV---KGRTWXLCGT 202
Query: 121 -FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 203 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 25/176 (14%)
Query: 32 EYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVC-HRDLKPQNLLVD 90
E PE +Y+ + L ++ Y++Q+ +G+ ++ + R C HRDL +N+L+
Sbjct: 184 EEAPEDLYKDF---------LTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLS 232
Query: 91 PLTHQVKICDFGSAKQLIAGEANISYICSRF---YRAPELIFGATEYTTSIDIWSAGCVL 147
+ VKICDFG A+ + + +R + APE IF YT D+WS G +L
Sbjct: 233 E-KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLL 290
Query: 148 AELL-LGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 202
E+ LG +PG V+I + +E R P+YT Q WH
Sbjct: 291 WEIFSLGASPYPG-------VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 339
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 104/255 (40%), Gaps = 44/255 (17%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
+R + HPN+I+L H F + L L LV ++ L S + ++K
Sbjct: 83 LREIRHPNIITL-HDIFENKTDVVLILELVS---GGELFDFLAEKESLTEDEATQFLK-- 136
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLV------DPLTHQVKICDFGSAKQLIAGEANI 114
QI G+ Y+H+ R+ H DLKP+N+++ +P ++K+ DFG A ++ AG
Sbjct: 137 --QILDGVHYLHS-KRIAHFDLKPENIMLLDKNVPNP---RIKLIDFGIAHKIEAGNEFK 190
Query: 115 SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG 174
+ + + APE++ D+WS G + LL G F GE + L I V
Sbjct: 191 NIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAV-- 247
Query: 175 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEA 234
NY DF + + A D RLL P R ++
Sbjct: 248 ------------NY-DF----------DEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQS 284
Query: 235 CAHPFFDELREPNAR 249
H + +R N R
Sbjct: 285 LEHSWIKAIRRRNVR 299
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 25/176 (14%)
Query: 32 EYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVC-HRDLKPQNLLVD 90
E PE +Y+ + L ++ Y++Q+ +G+ ++ + R C HRDL +N+L+
Sbjct: 186 EEAPEDLYKDF---------LTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLS 234
Query: 91 PLTHQVKICDFGSAKQLIAGEANISYICSRF---YRAPELIFGATEYTTSIDIWSAGCVL 147
+ VKICDFG A+ + + +R + APE IF YT D+WS G +L
Sbjct: 235 E-KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLL 292
Query: 148 AELL-LGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 202
E+ LG +PG V+I + +E R P+YT Q WH
Sbjct: 293 WEIFSLGASPYPG-------VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 341
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 102/241 (42%), Gaps = 39/241 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYV-PESMYRVLKHYSSANQRMPLIYVKL 59
M+ D P+V+ +F T L +VMEY S+ +++ N+ + +
Sbjct: 78 MQQCDSPHVVKYYGSYFKNTD-----LWIVMEYCGAGSVSDIIRLR---NKTLTEDEIAT 129
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+GL Y+H + R HRD+K N+L++ H K+ DFG A QL A + +
Sbjct: 130 ILQSTLKGLEYLHFM-RKIHRDIKAGNILLNTEGH-AKLADFGVAGQLTDXMAKRNXVIG 187
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 178
F+ APE+I Y DIWS G E+ G+P + + + + I PT
Sbjct: 188 TPFWMAPEVI-QEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMI------PT- 239
Query: 179 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHP 238
NP T FR P++ W F D + L SP R TA + HP
Sbjct: 240 ------NPPPT-FRKPEL----WSDNF--------TDFVKQCLVKSPEQRATATQLLQHP 280
Query: 239 F 239
F
Sbjct: 281 F 281
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 25/176 (14%)
Query: 32 EYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVC-HRDLKPQNLLVD 90
E PE +Y+ + L ++ Y++Q+ +G+ ++ + R C HRDL +N+L+
Sbjct: 179 EEAPEDLYKDF---------LTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLS 227
Query: 91 PLTHQVKICDFGSAKQLIAGEANISYICSRF---YRAPELIFGATEYTTSIDIWSAGCVL 147
+ VKICDFG A+ + + +R + APE IF YT D+WS G +L
Sbjct: 228 E-KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLL 285
Query: 148 AELL-LGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 202
E+ LG +PG V+I + +E R P+YT Q WH
Sbjct: 286 WEIFSLGASPYPG-------VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 334
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 25/176 (14%)
Query: 32 EYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVC-HRDLKPQNLLVD 90
E PE +Y+ + L ++ Y++Q+ +G+ ++ + R C HRDL +N+L+
Sbjct: 177 EEAPEDLYKDF---------LTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLS 225
Query: 91 PLTHQVKICDFGSAKQLIAGEANISYICSRF---YRAPELIFGATEYTTSIDIWSAGCVL 147
+ VKICDFG A+ + + +R + APE IF YT D+WS G +L
Sbjct: 226 E-KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLL 283
Query: 148 AELL-LGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 202
E+ LG +PG V+I + +E R P+YT Q WH
Sbjct: 284 WEIFSLGASPYPG-------VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 332
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 15/171 (8%)
Query: 2 RVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKLY 60
R++ N L FS + L++ VMEY P M+ L+ R + + Y
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLYM--VMEYAPGGEMFSHLRRIG----RFXEPHARFY 147
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI Y+H++ + +RDLKP+NL++D + +K+ DFG AK++ + +C
Sbjct: 148 AAQIVLTFEYLHSLD-LIYRDLKPENLMIDQQGY-IKVTDFGFAKRV---KGRTWXLCGT 202
Query: 121 -FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 203 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 15/158 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F K+ L +VMEYV M+ L+ R + +
Sbjct: 116 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARF 166
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ A + +
Sbjct: 167 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKG--ATWTLCGT 222
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF 157
Y APE+I + Y ++D W+ G ++ E+ G P F
Sbjct: 223 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 31/203 (15%)
Query: 52 MPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK--QLIA 109
MP + + +Q+ G+ Y+H + + HRD+KP+NLL+D + +KI DFG A +
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDN-LKISDFGLATVFRYNN 159
Query: 110 GEANISYICSRF-YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVE 168
E ++ +C Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE 217
Query: 169 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR 228
Y+D++ + +PW K++ + L ++L +PS R
Sbjct: 218 -------------------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSAR 253
Query: 229 CTALEACAHPFFDELREPNARLP 251
T + ++++ + A+ P
Sbjct: 254 ITIPDIKKDRWYNKPLKKGAKRP 276
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 90/177 (50%), Gaps = 20/177 (11%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKL 59
M + P V+ L + F +++ +L +VMEY+P + ++ +Y +P + +
Sbjct: 128 MAFANSPWVVQLFYAF-----QDDRYLYMVMEYMPGGDLVNLMSNYD-----VPEKWARF 177
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANI---SY 116
YT ++ L IH++ + HRD+KP N+L+D H +K+ DFG+ ++ E + +
Sbjct: 178 YTAEVVLALDAIHSMGFI-HRDVKPDNMLLDKSGH-LKLADFGTCMKM-NKEGMVRCDTA 234
Query: 117 ICSRFYRAPELI---FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
+ + Y +PE++ G Y D WS G L E+L+G F ++ V +I+
Sbjct: 235 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 291
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 87/171 (50%), Gaps = 18/171 (10%)
Query: 2 RVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKLY 60
+ ++ P ++ L+ F ++ L +V+EY P M+ L+ R + + Y
Sbjct: 97 QAVNFPFLVKLEFSFKDNSN-----LYMVLEYAPGGEMFSHLRRIG----RFSEPHARFY 147
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI Y+H++ + +RDLKP+NLL+D + +K+ DFG AK++ + +C
Sbjct: 148 AAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IKVADFGFAKRV---KGRTWXLCGT 202
Query: 121 -FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 203 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 90/177 (50%), Gaps = 20/177 (11%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKL 59
M + P V+ L + F +++ +L +VMEY+P + ++ +Y +P + +
Sbjct: 123 MAFANSPWVVQLFYAF-----QDDRYLYMVMEYMPGGDLVNLMSNYD-----VPEKWARF 172
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANI---SY 116
YT ++ L IH++ + HRD+KP N+L+D H +K+ DFG+ ++ E + +
Sbjct: 173 YTAEVVLALDAIHSMGFI-HRDVKPDNMLLDKSGH-LKLADFGTCMKM-NKEGMVRCDTA 229
Query: 117 ICSRFYRAPELI---FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
+ + Y +PE++ G Y D WS G L E+L+G F ++ V +I+
Sbjct: 230 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 286
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 31/203 (15%)
Query: 52 MPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK--QLIA 109
MP + + +Q+ G+ Y+H + + HRD+KP+NLL+D + +KI DFG A +
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDN-LKISDFGLATVFRYNN 158
Query: 110 GEANISYICSRF-YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVE 168
E ++ +C Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 159 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE 216
Query: 169 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR 228
Y+D++ + +PW K++ + L ++L +PS R
Sbjct: 217 -------------------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSAR 252
Query: 229 CTALEACAHPFFDELREPNARLP 251
T + ++++ + A+ P
Sbjct: 253 ITIPDIKKDRWYNKPLKKGAKRP 275
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 88/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F K+ L +VMEY P M+ L+ R + +
Sbjct: 95 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYAPGGEMFSHLRRIG----RFSEPHARF 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NL++D + +++ DFG AK++ + +C
Sbjct: 146 YAAQIVLTFEYLHSLD-LIYRDLKPENLMIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 200
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 201 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 31/203 (15%)
Query: 52 MPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK--QLIA 109
MP + + +Q+ G+ Y+H + + HRD+KP+NLL+D +KI DFG A +
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNN 158
Query: 110 GEANISYICSRF-YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVE 168
E ++ +C Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 159 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE 216
Query: 169 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR 228
Y+D++ + +PW K++ + L ++L +PS R
Sbjct: 217 -------------------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSAR 252
Query: 229 CTALEACAHPFFDELREPNARLP 251
T + ++++ + A+ P
Sbjct: 253 ITIPDIKKDRWYNKPLKKGAKRP 275
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 25/174 (14%)
Query: 34 VPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVC-HRDLKPQNLLVDPL 92
PE +Y+ + L ++ Y++Q+ +G+ ++ + R C HRDL +N+L+
Sbjct: 136 TPEDLYKDF---------LTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSE- 183
Query: 93 THQVKICDFGSAKQLIAGEANISYICSRF---YRAPELIFGATEYTTSIDIWSAGCVLAE 149
+ VKICDFG A+ + + +R + APE IF YT D+WS G +L E
Sbjct: 184 KNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWE 242
Query: 150 LL-LGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 202
+ LG +PG V+I + +E R P+YT Q WH
Sbjct: 243 IFSLGASPYPG-------VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 289
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 31/203 (15%)
Query: 52 MPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK--QLIA 109
MP + + +Q+ G+ Y+H + + HRD+KP+NLL+D +KI DFG A +
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNN 158
Query: 110 GEANISYICSRF-YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVE 168
E ++ +C Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 159 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE 216
Query: 169 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR 228
Y+D++ + +PW K++ + L ++L +PS R
Sbjct: 217 -------------------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSAR 252
Query: 229 CTALEACAHPFFDELREPNARLP 251
T + ++++ + A+ P
Sbjct: 253 ITIPDIKKDRWYNKPLKKGAKRP 275
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 90/177 (50%), Gaps = 20/177 (11%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKL 59
M + P V+ L + F +++ +L +VMEY+P + ++ +Y +P + +
Sbjct: 128 MAFANSPWVVQLFYAF-----QDDRYLYMVMEYMPGGDLVNLMSNYD-----VPEKWARF 177
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANI---SY 116
YT ++ L IH++ + HRD+KP N+L+D H +K+ DFG+ ++ E + +
Sbjct: 178 YTAEVVLALDAIHSMGFI-HRDVKPDNMLLDKSGH-LKLADFGTCMKM-NKEGMVRCDTA 234
Query: 117 ICSRFYRAPELI---FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
+ + Y +PE++ G Y D WS G L E+L+G F ++ V +I+
Sbjct: 235 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 291
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 31/203 (15%)
Query: 52 MPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK--QLIA 109
MP + + +Q+ G+ Y+H + + HRD+KP+NLL+D +KI DFG A +
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNN 159
Query: 110 GEANISYICSRF-YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVE 168
E ++ +C Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE 217
Query: 169 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR 228
Y+D++ + +PW K++ + L ++L +PS R
Sbjct: 218 -------------------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSAR 253
Query: 229 CTALEACAHPFFDELREPNARLP 251
T + ++++ + A+ P
Sbjct: 254 ITIPDIKKDRWYNKPLKKGAKRP 276
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 25/174 (14%)
Query: 34 VPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVC-HRDLKPQNLLVDPL 92
PE +Y+ + L ++ Y++Q+ +G+ ++ + R C HRDL +N+L+
Sbjct: 136 APEDLYKDF---------LTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSE- 183
Query: 93 THQVKICDFGSAKQLIAGEANISYICSRF---YRAPELIFGATEYTTSIDIWSAGCVLAE 149
+ VKICDFG A+ + + +R + APE IF YT D+WS G +L E
Sbjct: 184 KNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWE 242
Query: 150 LL-LGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 202
+ LG +PG V+I + +E R P+YT Q WH
Sbjct: 243 IFSLGASPYPG-------VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 289
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 31/203 (15%)
Query: 52 MPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK--QLIA 109
MP + + +Q+ G+ Y+H + + HRD+KP+NLL+D +KI DFG A +
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNN 159
Query: 110 GEANISYICSRF-YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVE 168
E ++ +C Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE 217
Query: 169 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR 228
Y+D++ + +PW K++ + L ++L +PS R
Sbjct: 218 -------------------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSAR 253
Query: 229 CTALEACAHPFFDELREPNARLP 251
T + ++++ + A+ P
Sbjct: 254 ITIPDIKKDRWYNKPLKKGAKRP 276
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 31/203 (15%)
Query: 52 MPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK--QLIA 109
MP + + +Q+ G+ Y+H + + HRD+KP+NLL+D +KI DFG A +
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNN 159
Query: 110 GEANISYICSRF-YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVE 168
E ++ +C Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE 217
Query: 169 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR 228
Y+D++ + +PW K++ + L ++L +PS R
Sbjct: 218 -------------------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSAR 253
Query: 229 CTALEACAHPFFDELREPNARLP 251
T + ++++ + A+ P
Sbjct: 254 ITIPDIKKDRWYNKPLKKGAKRP 276
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 31/203 (15%)
Query: 52 MPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK--QLIA 109
MP + + +Q+ G+ Y+H + + HRD+KP+NLL+D +KI DFG A +
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNN 159
Query: 110 GEANISYICSRF-YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVE 168
E ++ +C Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE 217
Query: 169 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR 228
Y+D++ + +PW K++ + L ++L +PS R
Sbjct: 218 -------------------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSAR 253
Query: 229 CTALEACAHPFFDELREPNARLP 251
T + ++++ + A+ P
Sbjct: 254 ITIPDIKKDRWYNKPLKKGAKRP 276
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 88/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F ++ L +VMEY P M+ L+ R + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSN-----LYMVMEYAPGGEMFSHLRRIG----RFSEPHARF 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NL++D + +++ DFG AK++ + +C
Sbjct: 146 YAAQIVLTFEYLHSLD-LIYRDLKPENLMIDQQGY-IQVTDFGLAKRV---KGRTWXLCG 200
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 201 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 31/203 (15%)
Query: 52 MPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK--QLIA 109
MP + + +Q+ G+ Y+H + + HRD+KP+NLL+D +KI DFG A +
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNN 158
Query: 110 GEANISYICSRF-YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVE 168
E ++ +C Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 159 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE 216
Query: 169 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR 228
Y+D++ + +PW K++ + L ++L +PS R
Sbjct: 217 -------------------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSAR 252
Query: 229 CTALEACAHPFFDELREPNARLP 251
T + ++++ + A+ P
Sbjct: 253 ITIPDIKKDRWYNKPLKKGAKRP 275
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 76/156 (48%), Gaps = 14/156 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL- 59
+R + H N++ K T + L+ME++P LK Y N+ + +L
Sbjct: 77 LRNLYHENIVKYKGI---CTEDGGNGIKLIMEFLPSGS---LKEYLPKNKNKINLKQQLK 130
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI +G+ Y+ + V HRDL +N+LV+ HQVKI DFG K + + +
Sbjct: 131 YAVQICKGMDYLGSRQYV-HRDLAARNVLVES-EHQVKIGDFGLTKAIETDKEXXTVKDD 188
Query: 120 R----FYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
R F+ APE + + Y S D+WS G L ELL
Sbjct: 189 RDSPVFWYAPECLMQSKFYIAS-DVWSFGVTLHELL 223
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 31/203 (15%)
Query: 52 MPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK--QLIA 109
MP + + +Q+ G+ Y+H + + HRD+KP+NLL+D +KI DFG A +
Sbjct: 100 MPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNN 157
Query: 110 GEANISYICSRF-YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVE 168
E ++ +C Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 158 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE 215
Query: 169 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR 228
Y+D++ + +PW K++ + L ++L +PS R
Sbjct: 216 -------------------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSAR 251
Query: 229 CTALEACAHPFFDELREPNARLP 251
T + ++++ + A+ P
Sbjct: 252 ITIPDIKKDRWYNKPLKKGAKRP 274
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 96/228 (42%), Gaps = 49/228 (21%)
Query: 57 VKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVD------------------------PL 92
+KLY +I + L Y+ + + H DLKP+N+L+D
Sbjct: 139 IKLYCIEILKALNYLRKMS-LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTK 197
Query: 93 THQVKICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL 152
+ +K+ DFG A + + S I +R YRAPE+I + S D+WS GCVLAEL
Sbjct: 198 STGIKLIDFGCAT--FKSDYHGSIINTRQYRAPEVILNLG-WDVSSDMWSFGCVLAELYT 254
Query: 153 GQPLFPGENAVDQLVEIIKVL----------GTPTREEIRCMNPNYTDFRFPQIKAHPWH 202
G LF ++ L + ++ T T + +N + +P+ A +
Sbjct: 255 GSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGS-KYVNKDELKLAWPE-NASSIN 312
Query: 203 KVFH--KRMPPEAI-------DLASRLLQYSPSLRCTALEACAHPFFD 241
+ H K +P I D +LQ P+LR + E H F +
Sbjct: 313 SIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 25/174 (14%)
Query: 34 VPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVC-HRDLKPQNLLVDPL 92
PE +Y+ + L ++ Y++Q+ +G+ ++ + R C HRDL +N+L+
Sbjct: 127 APEDLYKDF---------LTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSE- 174
Query: 93 THQVKICDFGSAKQLIAGEANISYICSRF---YRAPELIFGATEYTTSIDIWSAGCVLAE 149
+ VKICDFG A+ + + +R + APE IF YT D+WS G +L E
Sbjct: 175 KNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWE 233
Query: 150 LL-LGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 202
+ LG +PG V+I + +E R P+YT Q WH
Sbjct: 234 IFSLGASPYPG-------VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 280
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 46/217 (21%)
Query: 38 MYRVLKHYSSANQRMPL----IYVK----LYTYQIFRGLAYIHTVPRVCHRDLKPQNLLV 89
+Y +L++ S M L I+++ Y +I L ++H + +RDLKP+N+++
Sbjct: 96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQ-KGIIYRDLKPENIML 154
Query: 90 DPLTHQVKICDFGSAKQLIAGEANISYICSRF-YRAPELIFGATEYTTSIDIWSAGCVLA 148
+ H VK+ DFG K+ I C Y APE++ + + ++D WS G ++
Sbjct: 155 NHQGH-VKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILM-RSGHNRAVDWWSLGALMY 212
Query: 149 ELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKR 208
++L G P F GEN + +I+K ++ P+
Sbjct: 213 DMLTGAPPFTGENRKKTIDKILKC----------------------KLNLPPY------- 243
Query: 209 MPPEAIDLASRLLQYSPSLRC-----TALEACAHPFF 240
+ EA DL +LL+ + + R A E AHPFF
Sbjct: 244 LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFF 280
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 76/156 (48%), Gaps = 14/156 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL- 59
+R + H N++ K T + L+ME++P LK Y N+ + +L
Sbjct: 65 LRNLYHENIVKYKGI---CTEDGGNGIKLIMEFLPSGS---LKEYLPKNKNKINLKQQLK 118
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI +G+ Y+ + V HRDL +N+LV+ HQVKI DFG K + + +
Sbjct: 119 YAVQICKGMDYLGSRQYV-HRDLAARNVLVES-EHQVKIGDFGLTKAIETDKEXXTVKDD 176
Query: 120 R----FYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
R F+ APE + + Y S D+WS G L ELL
Sbjct: 177 RDSPVFWYAPECLMQSKFYIAS-DVWSFGVTLHELL 211
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 25/174 (14%)
Query: 34 VPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVC-HRDLKPQNLLVDPL 92
PE +Y+ + L ++ Y++Q+ +G+ ++ + R C HRDL +N+L+
Sbjct: 127 APEDLYKDF---------LTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSE- 174
Query: 93 THQVKICDFGSAKQLIAGEANISYICSRF---YRAPELIFGATEYTTSIDIWSAGCVLAE 149
+ VKICDFG A+ + + +R + APE IF YT D+WS G +L E
Sbjct: 175 KNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWE 233
Query: 150 LL-LGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 202
+ LG +PG V+I + +E R P+YT Q WH
Sbjct: 234 IFSLGASPYPG-------VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 280
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 46/217 (21%)
Query: 38 MYRVLKHYSSANQRMPL----IYVK----LYTYQIFRGLAYIHTVPRVCHRDLKPQNLLV 89
+Y +L++ S M L I+++ Y +I L ++H + +RDLKP+N+++
Sbjct: 96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQ-KGIIYRDLKPENIML 154
Query: 90 DPLTHQVKICDFGSAKQLI-AGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLA 148
+ H VK+ DFG K+ I G ++ + Y APE++ + + ++D WS G ++
Sbjct: 155 NHQGH-VKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILM-RSGHNRAVDWWSLGALMY 212
Query: 149 ELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKR 208
++L G P F GEN + +I+K ++ P+
Sbjct: 213 DMLTGAPPFTGENRKKTIDKILKC----------------------KLNLPPY------- 243
Query: 209 MPPEAIDLASRLLQYSPSLRC-----TALEACAHPFF 240
+ EA DL +LL+ + + R A E AHPFF
Sbjct: 244 LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFF 280
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 90/178 (50%), Gaps = 22/178 (12%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
M + P V+ L C F +++ +L +VMEY+P + ++ +Y +P + K
Sbjct: 129 MAFANSPWVVQL-FCAF----QDDKYLYMVMEYMPGGDLVNLMSNYD-----VPEKWAKF 178
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANI----S 115
YT ++ L IH++ + HRD+KP N+L+D H +K+ DFG+ ++ E + +
Sbjct: 179 YTAEVVLALDAIHSMGLI-HRDVKPDNMLLDKHGH-LKLADFGTCMKM--DETGMVHCDT 234
Query: 116 YICSRFYRAPELI---FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
+ + Y +PE++ G Y D WS G L E+L+G F ++ V +I+
Sbjct: 235 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIM 292
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 25/174 (14%)
Query: 34 VPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVC-HRDLKPQNLLVDPL 92
PE +Y+ + L ++ Y++Q+ +G+ ++ + R C HRDL +N+L+
Sbjct: 136 APEDLYKDF---------LTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSE- 183
Query: 93 THQVKICDFGSAKQLIAGEANISYICSRF---YRAPELIFGATEYTTSIDIWSAGCVLAE 149
+ VKICDFG A+ + + +R + APE IF YT D+WS G +L E
Sbjct: 184 KNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWE 242
Query: 150 LL-LGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 202
+ LG +PG V+I + +E R P+YT Q WH
Sbjct: 243 IFSLGASPYPG-------VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 289
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 29/218 (13%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYV---PESMYRVLKHYSSANQRMPLIYV 57
++ +DHPNV+ L NE L +V E V P LK S R
Sbjct: 90 LKKLDHPNVVKLVEVL---DDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQAR------ 140
Query: 58 KLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS-Y 116
Y + +G+ Y+H ++ HRD+KP NLLV H +KI DFG + + +A +S
Sbjct: 141 -FYFQDLIKGIEYLH-YQKIIHRDIKPSNLLVGEDGH-IKIADFGVSNEFKGSDALLSNT 197
Query: 117 ICSRFYRAPELIFGATEYTT--SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEI-IKVL 173
+ + + APE + + + ++D+W+ G L + GQ F E + +I + L
Sbjct: 198 VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQAL 257
Query: 174 GTPTREEI---------RCMNPN-YTDFRFPQIKAHPW 201
P + +I R ++ N + P+IK HPW
Sbjct: 258 EFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPW 295
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 88/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F K+ L +VMEYV M+ L+ R + +
Sbjct: 95 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFAEPHARF 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 146 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 200
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 201 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 88/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F K+ L +VMEYV M+ L+ R + +
Sbjct: 95 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARF 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 146 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 200
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 201 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 88/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F K+ L +VMEYV M+ L+ R + +
Sbjct: 95 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARF 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 146 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 200
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 201 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 88/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F K+ L +VMEYV M+ L+ R + +
Sbjct: 95 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARF 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 146 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 200
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 201 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 17/159 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F K+ L +VMEYV M+ L+ R + +
Sbjct: 95 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARF 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 146 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 200
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF 157
Y APE+I + Y ++D W+ G ++ E+ G P F
Sbjct: 201 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 101/250 (40%), Gaps = 55/250 (22%)
Query: 2 RVMDHPNVI---------SLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRM 52
R + HPN++ S + F + ELF ++V + YS A+
Sbjct: 60 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR----------EFYSEADASH 109
Query: 53 PLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTH--QVKICDFGSAKQLIAG 110
+ QI +AY H+ + HR+LKP+NLL+ VK+ DFG A ++
Sbjct: 110 CI-------QQILESIAYCHS-NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161
Query: 111 EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
EA + + Y +PE + Y+ +DIW+ G +L LL+G P F E+ +I
Sbjct: 162 EAWHGFAGTPGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI- 219
Query: 171 KVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 230
D+ P+ W V PEA L +L +P R T
Sbjct: 220 --------------KAGAYDYPSPE-----WDTV-----TPEAKSLIDSMLTVNPKKRIT 255
Query: 231 ALEACAHPFF 240
A +A P+
Sbjct: 256 ADQALKVPWI 265
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 88/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F K+ L +VMEYV M+ L+ R + +
Sbjct: 95 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARF 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 146 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 200
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 201 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 77/165 (46%), Gaps = 12/165 (7%)
Query: 7 PNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFR 66
P ++ H F T + L VMEYV L ++ R + Y +I
Sbjct: 80 PPFLTQLHSCFQTMDR----LYFVMEYVNGG---DLMYHIQQVGRFKEPHAVFYAAEIAI 132
Query: 67 GLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR-FYRAP 125
GL ++ + + +RDLK N+++D H +KI DFG K+ I C Y AP
Sbjct: 133 GLFFLQS-KGIIYRDLKLDNVMLDSEGH-IKIADFGMCKENIWDGVTTKXFCGTPDYIAP 190
Query: 126 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
E+I Y S+D W+ G +L E+L GQ F GE+ D+L + I
Sbjct: 191 EII-AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-DELFQSI 233
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 88/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F K+ L +VMEYV M+ L+ R + +
Sbjct: 96 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARF 146
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 147 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 201
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 202 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 31/217 (14%)
Query: 52 MPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE 111
+P+ +K + +YIH +CHRD+KP N+L+D +VK+ DFG ++ ++ +
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDK-NGRVKLSDFGESEYMVDKK 206
Query: 112 ANISYICSRFYRAPELIFGATEYT-TSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
S F PE + Y +DIWS G L + F + + LVE+
Sbjct: 207 IKGSRGTYEF-MPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKIS---LVELF 262
Query: 171 KVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKR-------MPPEAIDLASRLLQY 223
+ T E +P + H + + +K+ + E ID L+
Sbjct: 263 NNIRTKNIE-------------YPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRK 309
Query: 224 SPSLRCTALEACAHPFF-----DELREPNARLPNGRP 255
+P+ R T+ +A H + ++LRE + L R
Sbjct: 310 NPAERITSEDALKHEWLADTNIEDLREFSKELYKKRK 346
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 106/241 (43%), Gaps = 46/241 (19%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYS---SANQRMPLIYVKLY 60
+ HP+++ L + F N ++L L M + E M R LK+ S N+ + +
Sbjct: 68 LKHPSILELYNYF---EDSNYVYLVLEMCHNGE-MNRYLKNRVKPFSENE------ARHF 117
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL-IAGEANISYICS 119
+QI G+ Y+H+ + HRDL NLL+ +KI DFG A QL + E + + +
Sbjct: 118 MHQIITGMLYLHS-HGILHRDLTLSNLLLTR-NMNIKIADFGLATQLKMPHEKHYTLCGT 175
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
Y +PE I + + D+WS GC+ LL+G+P F + + L +++
Sbjct: 176 PNYISPE-IATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV--------- 225
Query: 180 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
D+ P + EA DL +LL+ +P+ R + HPF
Sbjct: 226 --------LADYEMPSF------------LSIEAKDLIHQLLRRNPADRLSLSSVLDHPF 265
Query: 240 F 240
Sbjct: 266 M 266
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 88/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F K+ L +VMEYV M+ L+ R + +
Sbjct: 95 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARF 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 146 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 200
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 201 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 17/159 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F K+ L +VMEYV M+ L+ R + +
Sbjct: 116 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFXEPHARF 166
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 167 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 221
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF 157
Y APE+I + Y ++D W+ G ++ E+ G P F
Sbjct: 222 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 117/281 (41%), Gaps = 38/281 (13%)
Query: 2 RVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYT 61
R + HPN++ K + T L +VMEY S + + +A R + +
Sbjct: 70 RSLRHPNIVRFKEVILTPT-----HLAIVMEYA--SGGELFERICNAG-RFSEDEARFFF 121
Query: 62 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPL-THQVKICDFGSAKQLIAGEANISYICSR 120
Q+ G++Y H + +V HRDLK +N L+D ++KI DFG +K + S + +
Sbjct: 122 QQLISGVSYAHAM-QVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTP 180
Query: 121 FYRAPELIFGATEYTTSI-DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
Y APE++ EY + D+WS G L +L+G F + I
Sbjct: 181 AYIAPEVLL-KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH-------- 231
Query: 180 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
R +N Y + I PE L SR+ P+ R + E H +
Sbjct: 232 --RILNVQYAIPDYVHIS-------------PECRHLISRIFVADPAKRISIPEIRNHEW 276
Query: 240 FDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPD 280
F L+ A L N + F+ + + G S E + ++I +
Sbjct: 277 F--LKNLPADLMNDNTMTTQFD-ESDQPGQSIEEIMQIIAE 314
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 88/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F K+ L +VMEYV M+ L+ R + +
Sbjct: 82 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARF 132
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 133 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDEQGY-IQVTDFGFAKRV---KGRTWXLCG 187
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 188 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 237
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 101/250 (40%), Gaps = 55/250 (22%)
Query: 2 RVMDHPNVI---------SLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRM 52
R + HPN++ S + F + ELF ++V + YS A+
Sbjct: 60 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR----------EFYSEADASH 109
Query: 53 PLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTH--QVKICDFGSAKQLIAG 110
+ QI +AY H+ + HR+LKP+NLL+ VK+ DFG A ++
Sbjct: 110 CI-------QQILESIAYCHS-NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161
Query: 111 EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
EA + + Y +PE + Y+ +DIW+ G +L LL+G P F E+ +I
Sbjct: 162 EAWHGFAGTPGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI- 219
Query: 171 KVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 230
D+ P+ W V PEA L +L +P R T
Sbjct: 220 --------------KAGAYDYPSPE-----WDTV-----TPEAKSLIDSMLTVNPKKRIT 255
Query: 231 ALEACAHPFF 240
A +A P+
Sbjct: 256 ADQALKVPWI 265
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 101/250 (40%), Gaps = 55/250 (22%)
Query: 2 RVMDHPNVI---------SLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRM 52
R + HPN++ S + F + ELF ++V + YS A+
Sbjct: 59 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR----------EFYSEADASH 108
Query: 53 PLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTH--QVKICDFGSAKQLIAG 110
+ QI +AY H+ + HR+LKP+NLL+ VK+ DFG A ++
Sbjct: 109 CI-------QQILESIAYCHS-NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 160
Query: 111 EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
EA + + Y +PE + Y+ +DIW+ G +L LL+G P F E+ +I
Sbjct: 161 EAWHGFAGTPGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI- 218
Query: 171 KVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 230
D+ P+ W V PEA L +L +P R T
Sbjct: 219 --------------KAGAYDYPSPE-----WDTV-----TPEAKSLIDSMLTVNPKKRIT 254
Query: 231 ALEACAHPFF 240
A +A P+
Sbjct: 255 ADQALKVPWI 264
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 25/174 (14%)
Query: 34 VPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVC-HRDLKPQNLLVDPL 92
PE +Y+ + L ++ Y++Q+ +G+ ++ + R C HRDL +N+L+
Sbjct: 138 APEDLYKDF---------LTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSE- 185
Query: 93 THQVKICDFGSAKQLIAGEANISYICSRF---YRAPELIFGATEYTTSIDIWSAGCVLAE 149
+ VKICDFG A+ + + +R + APE IF YT D+WS G +L E
Sbjct: 186 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWE 244
Query: 150 LL-LGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 202
+ LG +PG V+I + +E R P+YT Q WH
Sbjct: 245 IFSLGASPYPG-------VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 291
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 88/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F K+ L +VMEYV M+ L+ R + +
Sbjct: 95 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFXEPHARF 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 146 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 200
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 201 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 17/159 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F K+ L +VMEYV M+ L+ R + +
Sbjct: 95 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFXEPHARF 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 146 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 200
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF 157
Y APE+I + Y ++D W+ G ++ E+ G P F
Sbjct: 201 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 31/182 (17%)
Query: 52 MPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK--QLIA 109
MP + + +Q+ G+ Y+H + + HRD+KP+NLL+D +KI DFG A +
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNN 158
Query: 110 GEANISYICSRF-YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVE 168
E ++ +C Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 159 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE 216
Query: 169 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR 228
Y+D++ + +PW K++ + L ++L +PS R
Sbjct: 217 -------------------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSAR 252
Query: 229 CT 230
T
Sbjct: 253 IT 254
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 112/253 (44%), Gaps = 45/253 (17%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVP--ESMYRVLKHYSSANQRMPLIYVK 58
+R HPN+I+LK + + ++ +V E E + ++L+ + + +
Sbjct: 70 LRYGQHPNIITLKDVY-----DDGKYVYVVTELXKGGELLDKILRQKFFSEREASAV--- 121
Query: 59 LYTYQIFRGLAYIHTVPRVCHRDLKPQNLL-VDPLTH--QVKICDFGSAKQLIAGEANIS 115
L+T I + + Y+H V HRDLKP N+L VD + ++ICDFG AKQL A +
Sbjct: 122 LFT--ITKTVEYLH-AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLX 178
Query: 116 YIC-SRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLG-QPLFPGENAVDQLVEIIKVL 173
C + + APE + Y + DIWS G +L L G P G + D EI+ +
Sbjct: 179 TPCYTANFVAPE-VLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPD--DTPEEILARI 235
Query: 174 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 233
G+ +F + W+ V A DL S+ L P R TA
Sbjct: 236 GSG---------------KF-SLSGGYWNSV-----SDTAKDLVSKXLHVDPHQRLTAAL 274
Query: 234 ACAHPF---FDEL 243
HP+ +D+L
Sbjct: 275 VLRHPWIVHWDQL 287
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 31/182 (17%)
Query: 52 MPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK--QLIA 109
MP + + +Q+ G+ Y+H + + HRD+KP+NLL+D +KI DFG A +
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNN 158
Query: 110 GEANISYICSRF-YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVE 168
E ++ +C Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 159 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE 216
Query: 169 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR 228
Y+D++ + +PW K++ + L ++L +PS R
Sbjct: 217 -------------------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSAR 252
Query: 229 CT 230
T
Sbjct: 253 IT 254
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 31/182 (17%)
Query: 52 MPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK--QLIA 109
MP + + +Q+ G+ Y+H + + HRD+KP+NLL+D +KI DFG A +
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNN 159
Query: 110 GEANISYICSRF-YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVE 168
E ++ +C Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE 217
Query: 169 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR 228
Y+D++ + +PW K++ + L ++L +PS R
Sbjct: 218 -------------------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSAR 253
Query: 229 CT 230
T
Sbjct: 254 IT 255
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 21/149 (14%)
Query: 18 STTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRV 77
+ K+ LF+ MEY L H + NQ+ Y +L+ QI L+YIH+ +
Sbjct: 83 AVKKKSTLFIQ--MEYCENGTLYDLIHSENLNQQRDE-YWRLFR-QILEALSYIHS-QGI 137
Query: 78 CHRDLKPQNLLVDPLTHQVKICDFGSAK-------------QLIAGEAN--ISYICSRFY 122
HRDLKP N+ +D + VKI DFG AK Q + G ++ S I + Y
Sbjct: 138 IHRDLKPMNIFIDE-SRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMY 196
Query: 123 RAPELIFGATEYTTSIDIWSAGCVLAELL 151
A E++ G Y ID++S G + E++
Sbjct: 197 VATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 31/182 (17%)
Query: 52 MPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK--QLIA 109
MP + + +Q+ G+ Y+H + + HRD+KP+NLL+D +KI DFG A +
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNN 158
Query: 110 GEANISYICSRF-YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVE 168
E ++ +C Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 159 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE 216
Query: 169 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR 228
Y+D++ + +PW K++ + L ++L +PS R
Sbjct: 217 -------------------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSAR 252
Query: 229 CT 230
T
Sbjct: 253 IT 254
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 31/182 (17%)
Query: 52 MPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK--QLIA 109
MP + + +Q+ G+ Y+H + + HRD+KP+NLL+D +KI DFG A +
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNN 159
Query: 110 GEANISYICSRF-YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVE 168
E ++ +C Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE 217
Query: 169 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR 228
Y+D++ + +PW K++ + L ++L +PS R
Sbjct: 218 -------------------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSAR 253
Query: 229 CT 230
T
Sbjct: 254 IT 255
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 25/174 (14%)
Query: 34 VPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVC-HRDLKPQNLLVDPL 92
PE +Y+ + L ++ Y++Q+ +G+ ++ + R C HRDL +N+L+
Sbjct: 136 APEDLYKDF---------LTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSE- 183
Query: 93 THQVKICDFGSAKQLIAGEANISYICSRF---YRAPELIFGATEYTTSIDIWSAGCVLAE 149
+ VKICDFG A+ + + +R + APE IF YT D+WS G +L E
Sbjct: 184 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWE 242
Query: 150 LL-LGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 202
+ LG +PG V+I + +E R P+YT Q WH
Sbjct: 243 IFSLGASPYPG-------VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 289
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 31/182 (17%)
Query: 52 MPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK--QLIA 109
MP + + +Q+ G+ Y+H + + HRD+KP+NLL+D +KI DFG A +
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNN 158
Query: 110 GEANISYICSRF-YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVE 168
E ++ +C Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 159 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE 216
Query: 169 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR 228
Y+D++ + +PW K++ + L ++L +PS R
Sbjct: 217 -------------------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSAR 252
Query: 229 CT 230
T
Sbjct: 253 IT 254
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 77/165 (46%), Gaps = 12/165 (7%)
Query: 7 PNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFR 66
P ++ H F T + L VMEYV L ++ R + Y +I
Sbjct: 401 PPFLTQLHSCFQTMDR----LYFVMEYVNGG---DLMYHIQQVGRFKEPHAVFYAAEIAI 453
Query: 67 GLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR-FYRAP 125
GL ++ + + +RDLK N+++D H +KI DFG K+ I C Y AP
Sbjct: 454 GLFFLQS-KGIIYRDLKLDNVMLDSEGH-IKIADFGMCKENIWDGVTTKXFCGTPDYIAP 511
Query: 126 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
E+I Y S+D W+ G +L E+L GQ F GE+ D+L + I
Sbjct: 512 EII-AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-DELFQSI 554
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 88/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F K+ L +VMEYV M+ L+ R + +
Sbjct: 90 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFXEPHARF 140
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 141 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 195
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 196 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 245
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 25/174 (14%)
Query: 34 VPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVC-HRDLKPQNLLVDPL 92
PE +Y+ + L ++ Y++Q+ +G+ ++ + R C HRDL +N+L+
Sbjct: 173 APEDLYKDF---------LTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSE- 220
Query: 93 THQVKICDFGSAKQLIAGEANISYICSRF---YRAPELIFGATEYTTSIDIWSAGCVLAE 149
+ VKICDFG A+ + + +R + APE IF YT D+WS G +L E
Sbjct: 221 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWE 279
Query: 150 LL-LGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 202
+ LG +PG V+I + +E R P+YT Q WH
Sbjct: 280 IFSLGASPYPG-------VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 326
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 88/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F K+ L +VMEYV M+ L+ R + +
Sbjct: 95 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFXEPHARF 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 146 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 200
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 201 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 25/174 (14%)
Query: 34 VPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVC-HRDLKPQNLLVDPL 92
PE +Y+ + L ++ Y++Q+ +G+ ++ + R C HRDL +N+L+
Sbjct: 127 APEDLYKDF---------LTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSE- 174
Query: 93 THQVKICDFGSAKQLIAGEANISYICSRF---YRAPELIFGATEYTTSIDIWSAGCVLAE 149
+ VKICDFG A+ + + +R + APE IF YT D+WS G +L E
Sbjct: 175 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWE 233
Query: 150 LL-LGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 202
+ LG +PG V+I + +E R P+YT Q WH
Sbjct: 234 IFSLGASPYPG-------VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 280
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 25/174 (14%)
Query: 34 VPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVC-HRDLKPQNLLVDPL 92
PE +Y+ + L ++ Y++Q+ +G+ ++ + R C HRDL +N+L+
Sbjct: 127 APEDLYKDF---------LTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSE- 174
Query: 93 THQVKICDFGSAKQLIAGEANISYICSRF---YRAPELIFGATEYTTSIDIWSAGCVLAE 149
+ VKICDFG A+ + + +R + APE IF YT D+WS G +L E
Sbjct: 175 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWE 233
Query: 150 LL-LGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 202
+ LG +PG V+I + +E R P+YT Q WH
Sbjct: 234 IFSLGASPYPG-------VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 280
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 109/256 (42%), Gaps = 36/256 (14%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M + HP +I+L F +++ + L++E++ S + ++ + +M V Y
Sbjct: 102 MNQLHHPKLINLHDAF-----EDKYEMVLILEFL--SGGELFDRIAAEDYKMSEAEVINY 154
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVD-PLTHQVKICDFGSAKQLIAGEANISYICS 119
Q GL ++H + H D+KP+N++ + VKI DFG A +L E +
Sbjct: 155 MRQACEGLKHMHE-HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTAT 213
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 179
+ APE++ D+W+ G + LL G F GE+ ++ L +
Sbjct: 214 AEFAAPEIV-DREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVK--------- 263
Query: 180 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 239
RC D+ F + F + PEA D LLQ P R T +A HP+
Sbjct: 264 --RC------DWEFDE-------DAF-SSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPW 307
Query: 240 FD-ELREPNARLPNGR 254
+ +R+P+ R
Sbjct: 308 LKGDHSNLTSRIPSSR 323
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 21/149 (14%)
Query: 18 STTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRV 77
+ K+ LF+ MEY L H + NQ+ Y +L+ QI L+YIH+ +
Sbjct: 83 AVKKKSTLFIQ--MEYCENRTLYDLIHSENLNQQRDE-YWRLFR-QILEALSYIHS-QGI 137
Query: 78 CHRDLKPQNLLVDPLTHQVKICDFGSAK-------------QLIAGEAN--ISYICSRFY 122
HRDLKP N+ +D + VKI DFG AK Q + G ++ S I + Y
Sbjct: 138 IHRDLKPMNIFIDE-SRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMY 196
Query: 123 RAPELIFGATEYTTSIDIWSAGCVLAELL 151
A E++ G Y ID++S G + E++
Sbjct: 197 VATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 81/158 (51%), Gaps = 15/158 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F K+ L +VMEYV M+ L+ R + +
Sbjct: 95 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARF 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ ++
Sbjct: 146 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLAGTPE 203
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF 157
Y APE+I + Y ++D W+ G ++ E+ G P F
Sbjct: 204 --YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 52 MPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE 111
+ L ++ Y++Q+ +G+ ++ + + HRDL +N+L+ + VKICDFG A+ +
Sbjct: 141 LTLEHLICYSFQVAKGMEFLASRKXI-HRDLAARNILLSE-KNVVKICDFGLARDIYKDP 198
Query: 112 ANISYICSRF---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLV 167
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 199 DYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 250
Query: 168 EIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 202
+I + +E R P+YT Q WH
Sbjct: 251 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 285
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 82/159 (51%), Gaps = 17/159 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F K+ L +VMEYV M+ L+ R + +
Sbjct: 95 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARF 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NL++D + +++ DFG AK++ + +C
Sbjct: 146 YAAQIVLTFEYLHSLD-LIYRDLKPENLIIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 200
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF 157
Y APE+I + Y ++D W+ G ++ E+ G P F
Sbjct: 201 TPEYLAPEIII-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 79/169 (46%), Gaps = 17/169 (10%)
Query: 5 DHPNVISLKHCFFSTTSKNELFLNLVMEYV--PESMYRVLKHYSSANQRMPLIYVKLYTY 62
+HP + L CF + + LF VME+V + M+ + K ++R + Y
Sbjct: 82 NHPFLTQLFCCF---QTPDRLFF--VMEFVNGGDLMFHIQK-----SRRFDEARARFYAA 131
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR-F 121
+I L ++H + +RDLK N+L+D H K+ DFG K+ I + C
Sbjct: 132 EIISALMFLHD-KGIIYRDLKLDNVLLDHEGH-CKLADFGMCKEGICNGVTTATFCGTPD 189
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE I Y ++D W+ G +L E+L G F EN D L E I
Sbjct: 190 YIAPE-ILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE-DDLFEAI 236
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 88/172 (51%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F K+ L +VMEYV M+ L+ R + +
Sbjct: 95 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARF 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 146 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 200
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y APE+I + Y ++D W+ G ++ ++ G P F + + Q+ E I
Sbjct: 201 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYQMAAGYPPFFADQPI-QIYEKI 250
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 96/231 (41%), Gaps = 41/231 (17%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYV--PESMYRVLKHYSSANQRMPLIYVKLYTYQ 63
HPN++ L F ++L LVME + E R+ K + I KL +
Sbjct: 65 HPNIVKLHEVFH-----DQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVS-- 117
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTH--QVKICDFGSAKQLIAGEANISYIC-SR 120
++++H V V HRDLKP+NLL ++KI DFG A+ + C +
Sbjct: 118 ---AVSHMHDVG-VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTL 173
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN---AVDQLVEIIKVLGTPT 177
Y APEL+ Y S D+WS G +L +L GQ F + VEI+K +
Sbjct: 174 HYAAPELL-NQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKI---- 228
Query: 178 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR 228
DF F + W K + EA DL LL P+ R
Sbjct: 229 ---------KKGDFSF---EGEAW-----KNVSQEAKDLIQGLLTVDPNKR 262
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 80/158 (50%), Gaps = 15/158 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F K+ L +VMEYV M+ L+ R + +
Sbjct: 95 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARF 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ +
Sbjct: 146 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLXGTPE 203
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF 157
Y APE+I + Y ++D W+ G ++ E+ G P F
Sbjct: 204 --YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE-ANISYICSRF 121
+I +GL Y+H+ ++ HRD+K N+L+ +VK+ DFG A QL + +++ + F
Sbjct: 112 EILKGLDYLHSEKKI-HRDIKAANVLLSE-HGEVKLADFGVAGQLTDTQIKRNTFVGTPF 169
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQP 155
+ APE+I + Y + DIWS G EL G+P
Sbjct: 170 WMAPEVI-KQSAYDSKADIWSLGITAIELARGEP 202
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE-ANISYICSRF 121
+I +GL Y+H+ ++ HRD+K N+L+ +VK+ DFG A QL + +++ + F
Sbjct: 132 EILKGLDYLHSEKKI-HRDIKAANVLLSE-HGEVKLADFGVAGQLTDTQIKRNTFVGTPF 189
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQP 155
+ APE+I + Y + DIWS G EL G+P
Sbjct: 190 WMAPEVI-KQSAYDSKADIWSLGITAIELARGEP 222
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE-ANISYICSRF 121
+I +GL Y+H+ ++ HRD+K N+L+ VK+ DFG A QL + +++ + F
Sbjct: 128 EILKGLDYLHSEKKI-HRDIKAANVLLSE-QGDVKLADFGVAGQLTDTQIKRNTFVGTPF 185
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQP 155
+ APE+I + Y + DIWS G EL G+P
Sbjct: 186 WMAPEVI-QQSAYDSKADIWSLGITAIELAKGEP 218
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
+R + HPN+I+L H F + L L LV ++ L S + ++K
Sbjct: 69 LREIRHPNIITL-HDIFENKTDVVLILELVS---GGELFDFLAEKESLTEDEATQFLK-- 122
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLV------DPLTHQVKICDFGSAKQLIAGEANI 114
QI G+ Y+H+ R+ H DLKP+N+++ +P ++K+ DFG A ++ AG
Sbjct: 123 --QILDGVHYLHS-KRIAHFDLKPENIMLLDKNVPNP---RIKLIDFGIAHKIEAGNEFK 176
Query: 115 SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV 172
+ + + APE++ D+WS G + LL G F GE + L I V
Sbjct: 177 NIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAV 233
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 66/132 (50%), Gaps = 15/132 (11%)
Query: 27 LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQN 86
L LVMEY+P R A R+ + LY+ QI +G+ Y+ + R HRDL +N
Sbjct: 85 LRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLGSR-RCVHRDLAARN 141
Query: 87 LLVDPLTHQVKICDFGSAKQL-------IAGEANISYICSRFYRAPELIFGATEYTTSID 139
+LV+ H VKI DFG AK L + E S I F+ APE + ++ D
Sbjct: 142 ILVESEAH-VKIADFGLAKLLPLDKDXXVVREPGQSPI---FWYAPESL-SDNIFSRQSD 196
Query: 140 IWSAGCVLAELL 151
+WS G VL EL
Sbjct: 197 VWSFGVVLYELF 208
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS-YICSRF 121
+I +GL Y+H+ ++ HRD+K N+L+ +VK+ DFG A QL + + ++ + F
Sbjct: 112 EILKGLDYLHSEKKI-HRDIKAANVLLSE-HGEVKLADFGVAGQLTDTQIKRNXFVGTPF 169
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQP 155
+ APE+I + Y + DIWS G EL G+P
Sbjct: 170 WMAPEVI-KQSAYDSKADIWSLGITAIELARGEP 202
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS-YICSRF 121
+I +GL Y+H+ ++ HRD+K N+L+ +VK+ DFG A QL + + ++ + F
Sbjct: 127 EILKGLDYLHSEKKI-HRDIKAANVLLSE-HGEVKLADFGVAGQLTDTQIKRNXFVGTPF 184
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQP 155
+ APE+I + Y + DIWS G EL G+P
Sbjct: 185 WMAPEVI-KQSAYDSKADIWSLGITAIELARGEP 217
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 66/132 (50%), Gaps = 15/132 (11%)
Query: 27 LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQN 86
L LVMEY+P R A R+ + LY+ QI +G+ Y+ + R HRDL +N
Sbjct: 88 LRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLGSR-RCVHRDLAARN 144
Query: 87 LLVDPLTHQVKICDFGSAKQL-------IAGEANISYICSRFYRAPELIFGATEYTTSID 139
+LV+ H VKI DFG AK L + E S I F+ APE + ++ D
Sbjct: 145 ILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPI---FWYAPESL-SDNIFSRQSD 199
Query: 140 IWSAGCVLAELL 151
+WS G VL EL
Sbjct: 200 VWSFGVVLYELF 211
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 78/159 (49%), Gaps = 22/159 (13%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKL 59
+R + H ++I K C + E L LVMEYVP S+ L +S + L + L
Sbjct: 70 LRTLYHEHIIKYKGC---CEDQGEKSLQLVMEYVPLGSLRDYLPRHS-----IGLAQLLL 121
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ QI G+AY+H+ + HR+L +N+L+D VKI DFG AK + G Y
Sbjct: 122 FAQQICEGMAYLHSQHYI-HRNLAARNVLLDN-DRLVKIGDFGLAKAVPEGH---EYYRV 176
Query: 120 R-------FYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
R F+ APE + Y S D+WS G L ELL
Sbjct: 177 REDGDSPVFWYAPECLKEYKFYYAS-DVWSFGVTLYELL 214
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 35/205 (17%)
Query: 52 MPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE 111
MP + + +Q+ G+ Y+H + + HRD+KP+NLL+D +KI DFG A +
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDE-RDNLKISDFGLAT--VFRY 156
Query: 112 ANISYICSRF-----YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQL 166
N + ++ Y APEL+ + +D+WS G VL +L G+ P + D
Sbjct: 157 NNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSX 214
Query: 167 VEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPS 226
E Y+D++ + +PW K++ + L ++L +PS
Sbjct: 215 QE-------------------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPS 250
Query: 227 LRCTALEACAHPFFDELREPNARLP 251
R T + ++++ + A+ P
Sbjct: 251 ARITIPDIKKDRWYNKPLKKGAKRP 275
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 87/172 (50%), Gaps = 18/172 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F K+ L +VMEYV M+ L+ R + +
Sbjct: 95 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARF 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 146 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 200
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
Y AP +I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 201 TPEYLAPAIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 78/159 (49%), Gaps = 22/159 (13%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKL 59
+R + H ++I K C + + L LVMEYVP S+ L +S + L + L
Sbjct: 87 LRTLYHEHIIKYKGCCEDAGAAS---LQLVMEYVPLGSLRDYLPRHS-----IGLAQLLL 138
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG-------EA 112
+ QI G+AY+H + HRDL +N+L+D VKI DFG AK + G E
Sbjct: 139 FAQQICEGMAYLHAQHYI-HRDLAARNVLLDN-DRLVKIGDFGLAKAVPEGHEXYRVRED 196
Query: 113 NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
S + F+ APE + Y S D+WS G L ELL
Sbjct: 197 GDSPV---FWYAPECLKEYKFYYAS-DVWSFGVTLYELL 231
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 39/245 (15%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVP--ESMYRVLKHYSSANQRMPLIYVK 58
+ + H N++ L F S L ++ E++ + R+ N+R + YV
Sbjct: 55 LNIARHRNILHLHESFESMEE-----LVMIFEFISGLDIFERINTSAFELNEREIVSYV- 108
Query: 59 LYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPL-THQVKICDFGSAKQLIAGEANISYI 117
+Q+ L ++H+ + H D++P+N++ + +KI +FG A+QL G+
Sbjct: 109 ---HQVCEALQFLHS-HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLF 164
Query: 118 CSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 177
+ Y APE + +T+ D+WS G ++ LL G F E Q++E I
Sbjct: 165 TAPEYYAPE-VHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN-QQIIENI------- 215
Query: 178 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 237
MN YT + + K + EA+D RLL R TA EA H
Sbjct: 216 ------MNAEYT-----------FDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH 258
Query: 238 PFFDE 242
P+ +
Sbjct: 259 PWLKQ 263
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 114/270 (42%), Gaps = 43/270 (15%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
+R + HPN+I+L + +N + L++E V ++ L S ++ ++K
Sbjct: 69 LRQVLHPNIITLHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK- 122
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQN-LLVD---PLTHQVKICDFGSAKQLIAGEANIS 115
QI G+ Y+HT ++ H DLKP+N +L+D P+ H +K+ DFG A ++ G +
Sbjct: 123 ---QILDGVNYLHT-KKIAHFDLKPENIMLLDKNIPIPH-IKLIDFGLAHEIEDGVEFKN 177
Query: 116 YICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 175
+ + APE++ D+WS G + LL G F G+ + L I V
Sbjct: 178 IFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV--- 233
Query: 176 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ + + F + A D +LL R T EA
Sbjct: 234 ----------------------SYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEAL 271
Query: 236 AHPFFDELREPNARLPNGRPLPPLFNFKQE 265
HP+ + A + + L NFK++
Sbjct: 272 RHPWITPVDTQQA-MVRRESVVNLENFKKQ 300
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 66/132 (50%), Gaps = 15/132 (11%)
Query: 27 LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQN 86
L LVMEY+P R A R+ + LY+ QI +G+ Y+ + R HRDL +N
Sbjct: 89 LRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLGSR-RCVHRDLAARN 145
Query: 87 LLVDPLTHQVKICDFGSAKQL-------IAGEANISYICSRFYRAPELIFGATEYTTSID 139
+LV+ H VKI DFG AK L + E S I F+ APE + ++ D
Sbjct: 146 ILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPI---FWYAPESL-SDNIFSRQSD 200
Query: 140 IWSAGCVLAELL 151
+WS G VL EL
Sbjct: 201 VWSFGVVLYELF 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 66/132 (50%), Gaps = 15/132 (11%)
Query: 27 LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQN 86
L LVMEY+P R A R+ + LY+ QI +G+ Y+ + R HRDL +N
Sbjct: 101 LRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLGSR-RCVHRDLAARN 157
Query: 87 LLVDPLTHQVKICDFGSAKQL-------IAGEANISYICSRFYRAPELIFGATEYTTSID 139
+LV+ H VKI DFG AK L + E S I F+ APE + ++ D
Sbjct: 158 ILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPI---FWYAPESL-SDNIFSRQSD 212
Query: 140 IWSAGCVLAELL 151
+WS G VL EL
Sbjct: 213 VWSFGVVLYELF 224
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 35/205 (17%)
Query: 52 MPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE 111
MP + + +Q+ G+ Y+H + + HRD+KP+NLL+D +KI DFG A +
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDE-RDNLKISDFGLAT--VFRY 156
Query: 112 ANISYICSRF-----YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQL 166
N + ++ Y APEL+ + +D+WS G VL +L G+ P + D
Sbjct: 157 NNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSC 214
Query: 167 VEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPS 226
E Y+D++ + +PW K++ + L ++L +PS
Sbjct: 215 QE-------------------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPS 250
Query: 227 LRCTALEACAHPFFDELREPNARLP 251
R T + ++++ + A+ P
Sbjct: 251 ARITIPDIKKDRWYNKPLKKGAKRP 275
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 35/205 (17%)
Query: 52 MPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE 111
MP + + +Q+ G+ Y+H + + HRD+KP+NLL+D +KI DFG A +
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDE-RDNLKISDFGLAT--VFRY 157
Query: 112 ANISYICSRF-----YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQL 166
N + ++ Y APEL+ + +D+WS G VL +L G+ P + D
Sbjct: 158 NNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSC 215
Query: 167 VEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPS 226
E Y+D++ + +PW K++ + L ++L +PS
Sbjct: 216 QE-------------------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPS 251
Query: 227 LRCTALEACAHPFFDELREPNARLP 251
R T + ++++ + A+ P
Sbjct: 252 ARITIPDIKKDRWYNKPLKKGAKRP 276
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 77/151 (50%), Gaps = 14/151 (9%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTY 62
++HPN++ L + LVMEY S+Y VL H + + +
Sbjct: 58 VNHPNIVKLYGACLNPVC-------LVMEYAEGGSLYNVL-HGAEPLPYYTAAHAMSWCL 109
Query: 63 QIFRGLAYIHTV-PR-VCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
Q +G+AY+H++ P+ + HRDLKP NLL+ +KICDFG+A + N S
Sbjct: 110 QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK--GSA 167
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ APE +F + Y+ D++S G +L E++
Sbjct: 168 AWMAPE-VFEGSNYSEKCDVFSWGIILWEVI 197
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 35/205 (17%)
Query: 52 MPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE 111
MP + + +Q+ G+ Y+H + + HRD+KP+NLL+D +KI DFG A +
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDE-RDNLKISDFGLAT--VFRY 156
Query: 112 ANISYICSRF-----YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQL 166
N + ++ Y APEL+ + +D+WS G VL +L G+ P + D
Sbjct: 157 NNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSC 214
Query: 167 VEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPS 226
E Y+D++ + +PW K++ + L ++L +PS
Sbjct: 215 QE-------------------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPS 250
Query: 227 LRCTALEACAHPFFDELREPNARLP 251
R T + ++++ + A+ P
Sbjct: 251 ARITIPDIKKDRWYNKPLKKGAKRP 275
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 22/165 (13%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTY 62
++HPN++ L + LVMEY S+Y VL H + + +
Sbjct: 59 VNHPNIVKLYGACLNPVC-------LVMEYAEGGSLYNVL-HGAEPLPYYTAAHAMSWCL 110
Query: 63 QIFRGLAYIHTV-PR-VCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
Q +G+AY+H++ P+ + HRDLKP NLL+ +KICDFG+A + N S
Sbjct: 111 QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK--GSA 168
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELL--------LGQPLF 157
+ APE +F + Y+ D++S G +L E++ +G P F
Sbjct: 169 AWMAPE-VFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF 212
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 56 YVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS 115
Y+ +I +GL Y+H+ R HRD+K N+L+ VK+ DFG A QL + +
Sbjct: 117 YIATILREILKGLDYLHS-ERKIHRDIKAANVLLSE-QGDVKLADFGVAGQLTDTQIKRN 174
Query: 116 -YICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQP 155
++ + F+ APE+I + Y DIWS G EL G+P
Sbjct: 175 XFVGTPFWMAPEVI-KQSAYDFKADIWSLGITAIELAKGEP 214
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 112/280 (40%), Gaps = 56/280 (20%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M V+ HP +++L F NE+ VM Y S + + + + +M Y
Sbjct: 102 MSVLRHPTLVNLHDAF---EDDNEM----VMIYEFMSGGELFEKVADEHNKMSEDEAVEY 154
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLL-VDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Q+ +GL ++H V H DLKP+N++ ++++K+ DFG L ++ +
Sbjct: 155 MRQVCKGLCHMHENNYV-HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGT 213
Query: 120 RFYRAPELIFGA-TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 178
+ APE+ G Y T D+WS G + LL G F GEN + L
Sbjct: 214 AEFAAPEVAEGKPVGYYT--DMWSVGVLSYILLSGLSPFGGENDDETL------------ 259
Query: 179 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHP 238
++ + N D F I + D +LL P+ R T +A HP
Sbjct: 260 RNVKSCDWNMDDSAFSGISE-------------DGKDFIRKLLLADPNTRMTIHQALEHP 306
Query: 239 FFDELREP--NARLPNGR-----------------PLPPL 259
+ P ++++P+ R PLPPL
Sbjct: 307 WLTPGNAPGRDSQIPSSRYTKIRDSIKTKYDAWPEPLPPL 346
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 77/159 (48%), Gaps = 22/159 (13%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKL 59
+R + H ++I K C + E L LVMEYVP S+ L +S + L + L
Sbjct: 70 LRTLYHEHIIKYKGC---CEDQGEKSLQLVMEYVPLGSLRDYLPRHS-----IGLAQLLL 121
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ QI G+AY+H + HR+L +N+L+D VKI DFG AK + G Y
Sbjct: 122 FAQQICEGMAYLHAQHYI-HRNLAARNVLLDN-DRLVKIGDFGLAKAVPEGH---EYYRV 176
Query: 120 R-------FYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
R F+ APE + Y S D+WS G L ELL
Sbjct: 177 REDGDSPVFWYAPECLKEYKFYYAS-DVWSFGVTLYELL 214
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 112/280 (40%), Gaps = 56/280 (20%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M V+ HP +++L F NE+ VM Y S + + + + +M Y
Sbjct: 208 MSVLRHPTLVNLHDAF---EDDNEM----VMIYEFMSGGELFEKVADEHNKMSEDEAVEY 260
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLL-VDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Q+ +GL ++H V H DLKP+N++ ++++K+ DFG L ++ +
Sbjct: 261 MRQVCKGLCHMHENNYV-HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGT 319
Query: 120 RFYRAPELIFGA-TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 178
+ APE+ G Y T D+WS G + LL G F GEN + L
Sbjct: 320 AEFAAPEVAEGKPVGYYT--DMWSVGVLSYILLSGLSPFGGENDDETL------------ 365
Query: 179 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHP 238
++ + N D F I + D +LL P+ R T +A HP
Sbjct: 366 RNVKSCDWNMDDSAFSGISE-------------DGKDFIRKLLLADPNTRMTIHQALEHP 412
Query: 239 FFDELREP--NARLPNGR-----------------PLPPL 259
+ P ++++P+ R PLPPL
Sbjct: 413 WLTPGNAPGRDSQIPSSRYTKIRDSIKTKYDAWPEPLPPL 452
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ + HPNVI+L + +N+ + L++E V ++ L S + ++K
Sbjct: 67 LKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK- 120
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLV---DPLTHQVKICDFGSAKQLIAGEANISY 116
QI G+ Y+H++ ++ H DLKP+N+++ + ++KI DFG A ++ G +
Sbjct: 121 ---QILNGVYYLHSL-QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 176
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G+ + L
Sbjct: 177 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA--------- 226
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 236
+ +N + D F A A D RLL P R T ++
Sbjct: 227 ---NVSAVNYEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQ 270
Query: 237 HPF 239
HP+
Sbjct: 271 HPW 273
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ + HPNVI+L + +N+ + L++E V ++ L S + ++K
Sbjct: 67 LKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK- 120
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLV---DPLTHQVKICDFGSAKQLIAGEANISY 116
QI G+ Y+H++ ++ H DLKP+N+++ + ++KI DFG A ++ G +
Sbjct: 121 ---QILNGVYYLHSL-QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 176
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G+ + L
Sbjct: 177 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA--------- 226
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 236
+ +N + D F A A D RLL P R T ++
Sbjct: 227 ---NVSAVNYEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQ 270
Query: 237 HPF 239
HP+
Sbjct: 271 HPW 273
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 117/277 (42%), Gaps = 47/277 (16%)
Query: 3 VMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES--MYRVLKHYSSANQRMPLIYVKLY 60
++ HP+++ L + S L +V E++ + + ++K + A Y
Sbjct: 82 MLKHPHIVELLETYSSDG-----MLYMVFEFMDGADLCFEIVKR-ADAGFVYSEAVASHY 135
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ--VKICDFGSAKQLIAGEANI---S 115
QI L Y H + HRD+KP+N+L+ + VK+ DFG A QL GE+ +
Sbjct: 136 MRQILEALRYCHD-NNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL--GESGLVAGG 192
Query: 116 YICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 175
+ + + APE++ Y +D+W G +L LL G F G ++L E I + G
Sbjct: 193 RVGTPHFMAPEVV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGI-IKGK 248
Query: 176 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
MNP W + A DL R+L P+ R T EA
Sbjct: 249 YK------MNPR------------QWSHI-----SESAKDLVRRMLMLDPAERITVYEAL 285
Query: 236 AHPFFDELREPNA---RLPNGRPLPPLFNFKQELSGA 269
HP+ E R+ A LP FN +++L GA
Sbjct: 286 NHPWLKE-RDRYAYKIHLPETVEQLRKFNARRKLKGA 321
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ + HPNVI+L + +N+ + L++E V ++ L S + ++K
Sbjct: 68 LKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK- 121
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLV---DPLTHQVKICDFGSAKQLIAGEANISY 116
QI G+ Y+H++ ++ H DLKP+N+++ + ++KI DFG A ++ G +
Sbjct: 122 ---QILNGVYYLHSL-QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G+ + L
Sbjct: 178 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA--------- 227
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 236
+ +N + D F A A D RLL P R T ++
Sbjct: 228 ---NVSAVNYEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 237 HPF 239
HP+
Sbjct: 272 HPW 274
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 3 VMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTY 62
++HP ++++ + T L +VMEYV R + H I V
Sbjct: 68 ALNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC 126
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEAN-----ISYI 117
Q L + H + HRD+KP N+L+ T+ VK+ DFG A+ IA N + I
Sbjct: 127 Q---ALNFSHQ-NGIIHRDVKPANILIS-ATNAVKVVDFGIARA-IADSGNSVXQTAAVI 180
Query: 118 CSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV 163
+ Y +PE G + S D++S GCVL E+L G+P F G++ V
Sbjct: 181 GTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 21/162 (12%)
Query: 4 MDHPNVISLKHCFFS------TTSKNE-------LFLNLVMEYVPESMYRVLKHYSSANQ 50
+DH N++ C+ T+SKN LF+ ME+ + +
Sbjct: 61 LDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQ--MEFCDKGTLEQWIEKRRGEK 118
Query: 51 RMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNL-LVDPLTHQVKICDFGSAKQLIA 109
++ ++L+ QI +G+ YIH+ ++ +RDLKP N+ LVD T QVKI DFG L
Sbjct: 119 LDKVLALELFE-QITKGVDYIHS-KKLINRDLKPSNIFLVD--TKQVKIGDFGLVTSLKN 174
Query: 110 GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ Y +PE I + +Y +D+++ G +LAELL
Sbjct: 175 DGKRXRSKGTLRYMSPEQI-SSQDYGKEVDLYALGLILAELL 215
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ + HPNVI+L + +N+ + L++E V ++ L S + ++K
Sbjct: 68 LKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK- 121
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLV---DPLTHQVKICDFGSAKQLIAGEANISY 116
QI G+ Y+H++ ++ H DLKP+N+++ + ++KI DFG A ++ G +
Sbjct: 122 ---QILNGVYYLHSL-QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G+ + L
Sbjct: 178 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA--------- 227
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 236
+ +N + D F A A D RLL P R T ++
Sbjct: 228 ---NVSAVNYEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 237 HPF 239
HP+
Sbjct: 272 HPW 274
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ + HPNVI+L + +N+ + L++E V ++ L S + ++K
Sbjct: 68 LKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK- 121
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLV---DPLTHQVKICDFGSAKQLIAGEANISY 116
QI G+ Y+H++ ++ H DLKP+N+++ + ++KI DFG A ++ G +
Sbjct: 122 ---QILNGVYYLHSL-QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G+ + L
Sbjct: 178 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA--------- 227
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 236
+ +N + D F A A D RLL P R T ++
Sbjct: 228 ---NVSAVNYEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 237 HPF 239
HP+
Sbjct: 272 HPW 274
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ + HPNVI+L + +N+ + L++E V ++ L S + ++K
Sbjct: 68 LKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK- 121
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLV---DPLTHQVKICDFGSAKQLIAGEANISY 116
QI G+ Y+H++ ++ H DLKP+N+++ + ++KI DFG A ++ G +
Sbjct: 122 ---QILNGVYYLHSL-QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G+ + L
Sbjct: 178 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA--------- 227
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 236
+ +N + D F A A D RLL P R T ++
Sbjct: 228 ---NVSAVNYEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 237 HPF 239
HP+
Sbjct: 272 HPW 274
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ + HPNVI+L + +N+ + L++E V ++ L S + ++K
Sbjct: 68 LKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK- 121
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLV---DPLTHQVKICDFGSAKQLIAGEANISY 116
QI G+ Y+H++ ++ H DLKP+N+++ + ++KI DFG A ++ G +
Sbjct: 122 ---QILNGVYYLHSL-QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G+ + L
Sbjct: 178 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA--------- 227
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 236
+ +N + D F A A D RLL P R T ++
Sbjct: 228 ---NVSAVNYEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 237 HPF 239
HP+
Sbjct: 272 HPW 274
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 17/159 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ ++ P ++ L+ F K+ L +VMEYV M+ L+ R + +
Sbjct: 95 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARF 145
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y QI Y+H++ + +RDLKP+NLL+D + +++ DFG AK++ + +C
Sbjct: 146 YAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAKRV---KGRTWXLCG 200
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF 157
APE+I + Y ++D W+ G ++ E+ G P F
Sbjct: 201 TPEALAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ + HPNVI+L + +N+ + L++E V ++ L S + ++K
Sbjct: 68 LKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK- 121
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLV---DPLTHQVKICDFGSAKQLIAGEANISY 116
QI G+ Y+H++ ++ H DLKP+N+++ + ++KI DFG A ++ G +
Sbjct: 122 ---QILNGVYYLHSL-QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G+ + L
Sbjct: 178 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA--------- 227
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 236
+ +N + D F A A D RLL P R T ++
Sbjct: 228 ---NVSAVNYEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 237 HPF 239
HP+
Sbjct: 272 HPW 274
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 81/160 (50%), Gaps = 14/160 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKL 59
M+ + HPN++ F L++V EY+ S+YR+L H S A +++
Sbjct: 88 MKRLRHPNIV-----LFMGAVTQPPNLSIVTEYLSRGSLYRLL-HKSGAREQLDERRRLS 141
Query: 60 YTYQIFRGLAYIHTV-PRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYIC 118
Y + +G+ Y+H P + HRDLK NLLVD + VK+CDFG ++ L A S
Sbjct: 142 MAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDK-KYTVKVCDFGLSR-LKASXFLXSKXA 199
Query: 119 SRF--YRAPELIFGATEYTTSIDIWSAGCVLAEL-LLGQP 155
+ + APE++ S D++S G +L EL L QP
Sbjct: 200 AGTPEWMAPEVLRDEPSNEKS-DVYSFGVILWELATLQQP 238
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 85/189 (44%), Gaps = 30/189 (15%)
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR-FY 122
+ + LAY+H V HRD+K ++L+ L +VK+ DFG Q+ + ++
Sbjct: 150 VLQALAYLHA-QGVIHRDIKSDSILL-TLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYW 207
Query: 123 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 182
APE+I + Y T +DIWS G ++ E++ G+P + ++ V + + +R
Sbjct: 208 MAPEVI-SRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM------------KRLR 254
Query: 183 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 242
P P++K HKV P D R+L P R TA E HPF +
Sbjct: 255 DSPP-------PKLKNS--HKV-----SPVLRDFLERMLVRDPQERATAQELLDHPFLLQ 300
Query: 243 LREPNARLP 251
P +P
Sbjct: 301 TGLPECLVP 309
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 106/279 (37%), Gaps = 80/279 (28%)
Query: 38 MYRVLKHY------SSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNL---- 87
++ VL H+ S Q +PL VK Q+ +GL Y+HT R+ H D+KP+N+
Sbjct: 123 VFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSV 182
Query: 88 --------------------------------------LVDPL------THQVKICDFGS 103
LV+PL +VKI D G+
Sbjct: 183 NEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGN 242
Query: 104 AKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF---PGE 160
A + I +R YR+ E++ G+ Y T DIWS C+ EL G LF GE
Sbjct: 243 A--CWVHKHFTEDIQTRQYRSLEVLIGSG-YNTPADIWSTACMAFELATGDYLFEPHSGE 299
Query: 161 NAV---DQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQ-------IKAHPW--------H 202
D + II++LG R+ I + Y+ F + K PW
Sbjct: 300 EYTRDEDHIALIIELLGKVPRKLI--VAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEK 357
Query: 203 KVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 241
+ + D +L+ P R TA E HP+ +
Sbjct: 358 YEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN 396
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 106/279 (37%), Gaps = 80/279 (28%)
Query: 38 MYRVLKHY------SSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNL---- 87
++ VL H+ S Q +PL VK Q+ +GL Y+HT R+ H D+KP+N+
Sbjct: 107 VFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSV 166
Query: 88 --------------------------------------LVDPL------THQVKICDFGS 103
LV+PL +VKI D G+
Sbjct: 167 NEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGN 226
Query: 104 AKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF---PGE 160
A + I +R YR+ E++ G+ Y T DIWS C+ EL G LF GE
Sbjct: 227 A--CWVHKHFTEDIQTRQYRSLEVLIGSG-YNTPADIWSTACMAFELATGDYLFEPHSGE 283
Query: 161 NAV---DQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQ-------IKAHPW--------H 202
D + II++LG R+ I + Y+ F + K PW
Sbjct: 284 EYTRDEDHIALIIELLGKVPRKLI--VAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEK 341
Query: 203 KVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 241
+ + D +L+ P R TA E HP+ +
Sbjct: 342 YEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN 380
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 35/184 (19%)
Query: 52 MPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE 111
MP + + +Q+ G+ Y+H + + HRD+KP+NLL+D +KI DFG A +
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDE-RDNLKISDFGLAT--VFRY 156
Query: 112 ANISYICSRF-----YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQL 166
N + ++ Y APEL+ + +D+WS G VL +L G+ P + D
Sbjct: 157 NNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSC 214
Query: 167 VEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPS 226
E Y+D++ + +PW K++ + L ++L +PS
Sbjct: 215 QE-------------------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPS 250
Query: 227 LRCT 230
R T
Sbjct: 251 ARIT 254
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ + HPNVI+L + +N+ + L++E V ++ L S + ++K
Sbjct: 68 LKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK- 121
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLV---DPLTHQVKICDFGSAKQLIAGEANISY 116
QI G+ Y+H++ ++ H DLKP+N+++ + ++KI DFG A ++ G +
Sbjct: 122 ---QILNGVYYLHSL-QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G+ + L
Sbjct: 178 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA--------- 227
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 236
+ +N + D F A A D RLL P R T ++
Sbjct: 228 ---NVSAVNYEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 237 HPF 239
HP+
Sbjct: 272 HPW 274
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ + HPNVI+L + +N+ + L++E V ++ L S + ++K
Sbjct: 68 LKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK- 121
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLV---DPLTHQVKICDFGSAKQLIAGEANISY 116
QI G+ Y+H++ ++ H DLKP+N+++ + ++KI DFG A ++ G +
Sbjct: 122 ---QILNGVYYLHSL-QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G+ + L
Sbjct: 178 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA--------- 227
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 236
+ +N + D F A A D RLL P R T ++
Sbjct: 228 ---NVSAVNYEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 237 HPF 239
HP+
Sbjct: 272 HPW 274
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ + HPNVI+L + +N+ + L++E V ++ L S + ++K
Sbjct: 68 LKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK- 121
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLV---DPLTHQVKICDFGSAKQLIAGEANISY 116
QI G+ Y+H++ ++ H DLKP+N+++ + ++KI DFG A ++ G +
Sbjct: 122 ---QILNGVYYLHSL-QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G+ + L
Sbjct: 178 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA--------- 227
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 236
+ +N + D F A A D RLL P R T ++
Sbjct: 228 ---NVSAVNYEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 237 HPF 239
HP+
Sbjct: 272 HPW 274
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 90/214 (42%), Gaps = 57/214 (26%)
Query: 17 FSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPR 76
F + N + + +V E + + + + S Q +P+ VK Q+ +GL Y+H+ +
Sbjct: 104 FKISGMNGIHVCMVFEVLGHHLLKWI--IKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCK 161
Query: 77 VCHRDLKPQN----------------------------------------LLVDPLT--- 93
+ H D+KP+N LLV+PL
Sbjct: 162 IIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAVSTAPAADLLVNPLDPRN 221
Query: 94 ---HQVKICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAEL 150
+VKI D G+A + I +R YR+ E++ GA Y+T DIWS C+ EL
Sbjct: 222 ADKIRVKIADLGNA--CWVHKHFTEDIQTRQYRSIEVLIGAG-YSTPADIWSTACMAFEL 278
Query: 151 LLGQPLF---PGEN---AVDQLVEIIKVLGTPTR 178
G LF GE+ D + II++LG+ R
Sbjct: 279 ATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPR 312
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 109/255 (42%), Gaps = 45/255 (17%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
MR H NV+ + + + +EL++ VME++ + ++ N+ +
Sbjct: 82 MRDYQHENVVEMYNSYLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAV 132
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTH--QVKICDFGSAKQLIAGEA--NISY 116
+ + L+ +H V HRD+K ++L LTH +VK+ DFG Q ++ E
Sbjct: 133 CLAVLQALSVLHA-QGVIHRDIKSDSIL---LTHDGRVKLSDFGFCAQ-VSKEVPRRKXL 187
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + ++ APELI Y +DIWS G ++ E++ G+P + E P
Sbjct: 188 VGTPYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------P 231
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 236
+ ++ + N P K HK + P RLL P+ R TA E
Sbjct: 232 PLKAMKMIRDNLP----------PRLKNLHK-VSPSLKGFLDRLLVRDPAQRATAAELLK 280
Query: 237 HPFFDELREPNARLP 251
HPF + P + +P
Sbjct: 281 HPFLAKAGPPASIVP 295
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 109/255 (42%), Gaps = 45/255 (17%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
MR H NV+ + + + +EL++ VME++ + ++ N+ +
Sbjct: 80 MRDYQHENVVEMYNSYLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAV 130
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTH--QVKICDFGSAKQLIAGEA--NISY 116
+ + L+ +H V HRD+K ++L LTH +VK+ DFG Q ++ E
Sbjct: 131 CLAVLQALSVLHA-QGVIHRDIKSDSIL---LTHDGRVKLSDFGFCAQ-VSKEVPRRKXL 185
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + ++ APELI Y +DIWS G ++ E++ G+P + E P
Sbjct: 186 VGTPYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------P 229
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 236
+ ++ + N P K HK + P RLL P+ R TA E
Sbjct: 230 PLKAMKMIRDNLP----------PRLKNLHK-VSPSLKGFLDRLLVRDPAQRATAAELLK 278
Query: 237 HPFFDELREPNARLP 251
HPF + P + +P
Sbjct: 279 HPFLAKAGPPASIVP 293
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 109/255 (42%), Gaps = 45/255 (17%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
MR H NV+ + + + +EL++ VME++ + ++ N+ +
Sbjct: 75 MRDYQHENVVEMYNSYLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAV 125
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTH--QVKICDFGSAKQLIAGEA--NISY 116
+ + L+ +H V HRD+K ++L LTH +VK+ DFG Q ++ E
Sbjct: 126 CLAVLQALSVLHA-QGVIHRDIKSDSIL---LTHDGRVKLSDFGFCAQ-VSKEVPRRKXL 180
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + ++ APELI Y +DIWS G ++ E++ G+P + E P
Sbjct: 181 VGTPYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------P 224
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 236
+ ++ + N P K HK + P RLL P+ R TA E
Sbjct: 225 PLKAMKMIRDNLP----------PRLKNLHK-VSPSLKGFLDRLLVRDPAQRATAAELLK 273
Query: 237 HPFFDELREPNARLP 251
HPF + P + +P
Sbjct: 274 HPFLAKAGPPASIVP 288
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 109/255 (42%), Gaps = 45/255 (17%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
MR H NV+ + + + +EL++ VME++ + ++ N+ +
Sbjct: 71 MRDYQHENVVEMYNSYLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAV 121
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTH--QVKICDFGSAKQLIAGEA--NISY 116
+ + L+ +H V HRD+K ++L LTH +VK+ DFG Q ++ E
Sbjct: 122 CLAVLQALSVLHA-QGVIHRDIKSDSIL---LTHDGRVKLSDFGFCAQ-VSKEVPRRKXL 176
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + ++ APELI Y +DIWS G ++ E++ G+P + E P
Sbjct: 177 VGTPYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------P 220
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 236
+ ++ + N P K HK + P RLL P+ R TA E
Sbjct: 221 PLKAMKMIRDNLP----------PRLKNLHK-VSPSLKGFLDRLLVRDPAQRATAAELLK 269
Query: 237 HPFFDELREPNARLP 251
HPF + P + +P
Sbjct: 270 HPFLAKAGPPASIVP 284
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 109/255 (42%), Gaps = 45/255 (17%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
MR H NV+ + + + +EL++ VME++ + ++ N+ +
Sbjct: 125 MRDYQHENVVEMYNSYLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAV 175
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTH--QVKICDFGSAKQLIAGEA--NISY 116
+ + L+ +H V HRD+K ++L LTH +VK+ DFG Q ++ E
Sbjct: 176 CLAVLQALSVLHA-QGVIHRDIKSDSIL---LTHDGRVKLSDFGFCAQ-VSKEVPRRKXL 230
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + ++ APELI Y +DIWS G ++ E++ G+P + E P
Sbjct: 231 VGTPYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------P 274
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 236
+ ++ + N P K HK + P RLL P+ R TA E
Sbjct: 275 PLKAMKMIRDNLP----------PRLKNLHK-VSPSLKGFLDRLLVRDPAQRATAAELLK 323
Query: 237 HPFFDELREPNARLP 251
HPF + P + +P
Sbjct: 324 HPFLAKAGPPASIVP 338
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 14/160 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKL 59
M+ + HPN++ F L++V EY+ S+YR+L H S A +++
Sbjct: 88 MKRLRHPNIV-----LFMGAVTQPPNLSIVTEYLSRGSLYRLL-HKSGAREQLDERRRLS 141
Query: 60 YTYQIFRGLAYIHTV-PRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE--ANISY 116
Y + +G+ Y+H P + HR+LK NLLVD + VK+CDFG ++ L A ++ S
Sbjct: 142 MAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDK-KYTVKVCDFGLSR-LKASTFLSSKSA 199
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAEL-LLGQP 155
+ + APE++ S D++S G +L EL L QP
Sbjct: 200 AGTPEWMAPEVLRDEPSNEKS-DVYSFGVILWELATLQQP 238
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 59 LYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANI-SYI 117
YT QI GL ++H + +RDLKP+N+L+D V+I D G A +L AG+ Y
Sbjct: 293 FYTAQIVSGLEHLHQ-RNIIYRDLKPENVLLDD-DGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 118 CSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ + APEL+ G EY S+D ++ G L E++
Sbjct: 351 GTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMI 383
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ + HPNVI+L + +N+ + L++E V ++ L S + ++K
Sbjct: 68 LKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK- 121
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLV---DPLTHQVKICDFGSAKQLIAGEANISY 116
QI G+ Y+H++ ++ H DLKP+N+++ + ++KI DFG A ++ G +
Sbjct: 122 ---QILNGVYYLHSL-QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G+ + L
Sbjct: 178 FGTPAFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA--------- 227
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 236
+ +N + D F A A D RLL P R T ++
Sbjct: 228 ---NVSAVNYEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 237 HPF 239
HP+
Sbjct: 272 HPW 274
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 59 LYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANI-SYI 117
YT QI GL ++H + +RDLKP+N+L+D V+I D G A +L AG+ Y
Sbjct: 293 FYTAQIVSGLEHLHQ-RNIIYRDLKPENVLLDD-DGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 118 CSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ + APEL+ G EY S+D ++ G L E++
Sbjct: 351 GTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMI 383
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 14/155 (9%)
Query: 52 MPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE 111
+ L ++ Y++Q+ +G+ ++ + + HRDL +N+L+ + VKI DFG A+ +
Sbjct: 141 LTLEHLIXYSFQVAKGMEFLAS-RKXIHRDLAARNILLSE-KNVVKIXDFGLARDIYKDP 198
Query: 112 ANISYICSRF---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLV 167
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 199 DYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 250
Query: 168 EIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 202
+I + +E R P+YT Q WH
Sbjct: 251 KIDEEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWH 285
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 59 LYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANI-SYI 117
YT QI GL ++H + +RDLKP+N+L+D V+I D G A +L AG+ Y
Sbjct: 293 FYTAQIVSGLEHLHQ-RNIIYRDLKPENVLLDD-DGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 118 CSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ + APEL+ G EY S+D ++ G L E++
Sbjct: 351 GTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMI 383
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 3 VMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTY 62
++HP ++++ + T L +VMEYV R + H I V
Sbjct: 68 ALNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC 126
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEAN-----ISYI 117
Q L + H + HRD+KP N+++ T+ VK+ DFG A+ IA N + I
Sbjct: 127 Q---ALNFSHQ-NGIIHRDVKPANIMIS-ATNAVKVMDFGIARA-IADSGNSVTQTAAVI 180
Query: 118 CSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV 163
+ Y +PE G + S D++S GCVL E+L G+P F G++ V
Sbjct: 181 GTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNL-LVDPLTHQVKICDFGSAKQLIAGEANISYICSRF 121
QI +G+ YIH+ ++ HRDLKP N+ LVD T QVKI DFG L +
Sbjct: 144 QITKGVDYIHS-KKLIHRDLKPSNIFLVD--TKQVKIGDFGLVTSLKNDGKRTRSKGTLR 200
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
Y +PE I + +Y +D+++ G +LAELL
Sbjct: 201 YMSPEQI-SSQDYGKEVDLYALGLILAELL 229
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 3 VMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTY 62
++HP ++++ + T L +VMEYV R + H I V
Sbjct: 68 ALNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC 126
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEAN-----ISYI 117
Q L + H + HRD+KP N+++ T+ VK+ DFG A+ IA N + I
Sbjct: 127 Q---ALNFSHQ-NGIIHRDVKPANIMIS-ATNAVKVMDFGIARA-IADSGNSVTQTAAVI 180
Query: 118 CSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV 163
+ Y +PE G + S D++S GCVL E+L G+P F G++ V
Sbjct: 181 GTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ + HPNVI+L + +N+ + L++E V ++ L S + ++K
Sbjct: 68 LKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK- 121
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLV---DPLTHQVKICDFGSAKQLIAGEANISY 116
QI G+ Y+H++ ++ H DLKP+N+++ + ++KI DFG A ++ G +
Sbjct: 122 ---QILNGVYYLHSL-QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G+ + L
Sbjct: 178 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA--------- 227
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 236
+ +N + D F A A D RLL P R T ++
Sbjct: 228 ---NVSAVNYEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 237 HPF 239
HP+
Sbjct: 272 HPW 274
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 59 LYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANI-SYI 117
YT QI GL ++H + +RDLKP+N+L+D V+I D G A +L AG+ Y
Sbjct: 293 FYTAQIVSGLEHLHQ-RNIIYRDLKPENVLLDD-DGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 118 CSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ + APEL+ G EY S+D ++ G L E++
Sbjct: 351 GTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMI 383
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 18/148 (12%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ--VKICDFGSAKQLIAGEANISYI 117
++YQ+ +G+A++ + HRDL +N+L LTH KICDFG A+ + +
Sbjct: 150 FSYQVAKGMAFLAS-KNCIHRDLAARNIL---LTHGRITKICDFGLARDIKNDSNYVVKG 205
Query: 118 CSRF---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIKVL 173
+R + APE IF YT D+WS G L EL LG +PG + ++IK
Sbjct: 206 NARLPVKWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK-- 262
Query: 174 GTPTREEIRCMNPNYTDFRFPQIKAHPW 201
E R ++P + I W
Sbjct: 263 -----EGFRMLSPEHAPAEMYDIMKTCW 285
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 102/243 (41%), Gaps = 40/243 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
++ + HPNVI+L + +N+ + L+ E V ++ L S + ++K
Sbjct: 68 LKEIQHPNVITLHEVY-----ENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLK- 121
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLV---DPLTHQVKICDFGSAKQLIAGEANISY 116
QI G+ Y+H++ ++ H DLKP+N+++ + ++KI DFG A ++ G +
Sbjct: 122 ---QILNGVYYLHSL-QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G+ + L
Sbjct: 178 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA--------- 227
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 236
+ +N + D F A A D RLL P R T ++
Sbjct: 228 ---NVSAVNYEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 237 HPF 239
HP+
Sbjct: 272 HPW 274
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 18/148 (12%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ--VKICDFGSAKQLIAGEANISYI 117
++YQ+ +G+A++ + HRDL +N+L LTH KICDFG A+ + +
Sbjct: 166 FSYQVAKGMAFLAS-KNCIHRDLAARNIL---LTHGRITKICDFGLARDIKNDSNYVVKG 221
Query: 118 CSRF---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIKVL 173
+R + APE IF YT D+WS G L EL LG +PG + ++IK
Sbjct: 222 NARLPVKWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK-- 278
Query: 174 GTPTREEIRCMNPNYTDFRFPQIKAHPW 201
E R ++P + I W
Sbjct: 279 -----EGFRMLSPEHAPAEMYDIMKTCW 301
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 18/148 (12%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ--VKICDFGSAKQLIAGEANISYI 117
++YQ+ +G+A++ + HRDL +N+L LTH KICDFG A+ + +
Sbjct: 173 FSYQVAKGMAFLAS-KNCIHRDLAARNIL---LTHGRITKICDFGLARDIKNDSNYVVKG 228
Query: 118 CSRF---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIKVL 173
+R + APE IF YT D+WS G L EL LG +PG + ++IK
Sbjct: 229 NARLPVKWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK-- 285
Query: 174 GTPTREEIRCMNPNYTDFRFPQIKAHPW 201
E R ++P + I W
Sbjct: 286 -----EGFRMLSPEHAPAEMYDIMKTCW 308
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 109/255 (42%), Gaps = 45/255 (17%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
MR H NV+ + + + +EL++ VME++ + ++ N+ +
Sbjct: 202 MRDYQHENVVEMYNSYLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAV 252
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTH--QVKICDFGSAKQLIAGEA--NISY 116
+ + L+ +H V HRD+K ++L LTH +VK+ DFG Q ++ E
Sbjct: 253 CLAVLQALSVLHAQ-GVIHRDIKSDSIL---LTHDGRVKLSDFGFCAQ-VSKEVPRRKXL 307
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 176
+ + ++ APELI Y +DIWS G ++ E++ G+P + E P
Sbjct: 308 VGTPYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------P 351
Query: 177 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 236
+ ++ + N P K HK + P RLL P+ R TA E
Sbjct: 352 PLKAMKMIRDNLP----------PRLKNLHK-VSPSLKGFLDRLLVRDPAQRATAAELLK 400
Query: 237 HPFFDELREPNARLP 251
HPF + P + +P
Sbjct: 401 HPFLAKAGPPASIVP 415
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 3 VMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTY 62
++HP ++++ + T L +VMEYV R + H I V
Sbjct: 68 ALNHPAIVAVYATGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC 126
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEAN-----ISYI 117
Q L + H + HRD+KP N+++ T+ VK+ DFG A+ IA N + I
Sbjct: 127 Q---ALNFSHQ-NGIIHRDVKPANIMIS-ATNAVKVMDFGIARA-IADSGNSVTQTAAVI 180
Query: 118 CSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV 163
+ Y +PE G + S D++S GCVL E+L G+P F G++ V
Sbjct: 181 GTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 18/148 (12%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ--VKICDFGSAKQLIAGEANISYI 117
++YQ+ +G+A++ + HRDL +N+L LTH KICDFG A+ + +
Sbjct: 173 FSYQVAKGMAFLAS-KNCIHRDLAARNIL---LTHGRITKICDFGLARHIKNDSNYVVKG 228
Query: 118 CSRF---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIKVL 173
+R + APE IF YT D+WS G L EL LG +PG + ++IK
Sbjct: 229 NARLPVKWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK-- 285
Query: 174 GTPTREEIRCMNPNYTDFRFPQIKAHPW 201
E R ++P + I W
Sbjct: 286 -----EGFRMLSPEHAPAEMYDIMKTCW 308
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 79/165 (47%), Gaps = 13/165 (7%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQ 63
++HP ++++ + T L +VMEYV R + H I V Q
Sbjct: 86 LNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 144
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEAN-----ISYIC 118
L + H + HRD+KP N+++ T+ VK+ DFG A+ IA N + I
Sbjct: 145 ---ALNFSHQ-NGIIHRDVKPANIMISA-TNAVKVMDFGIARA-IADSGNSVTQTAAVIG 198
Query: 119 SRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV 163
+ Y +PE G + S D++S GCVL E+L G+P F G++ V
Sbjct: 199 TAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 242
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 18/148 (12%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ--VKICDFGSAKQLIAGEANISYI 117
++YQ+ +G+A++ + HRDL +N+L LTH KICDFG A+ + +
Sbjct: 168 FSYQVAKGMAFLAS-KNCIHRDLAARNIL---LTHGRITKICDFGLARDIKNDSNYVVKG 223
Query: 118 CSRF---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIKVL 173
+R + APE IF YT D+WS G L EL LG +PG + ++IK
Sbjct: 224 NARLPVKWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK-- 280
Query: 174 GTPTREEIRCMNPNYTDFRFPQIKAHPW 201
E R ++P + I W
Sbjct: 281 -----EGFRMLSPEHAPAEMYDIMKTCW 303
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 3 VMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTY 62
++HP ++++ + T L +VMEYV R + H I V
Sbjct: 68 ALNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC 126
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEAN-----ISYI 117
Q L + H + HRD+KP N+++ T+ VK+ DFG A+ IA N + I
Sbjct: 127 Q---ALNFSHQ-NGIIHRDVKPANIMIS-ATNAVKVMDFGIARA-IADSGNSVTQTAAVI 180
Query: 118 CSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 161
+ Y +PE G + S D++S GCVL E+L G+P F G++
Sbjct: 181 GTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 106/242 (43%), Gaps = 33/242 (13%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M+ ++HP +++L ++S + ++F+ V + L+++ N VKL+
Sbjct: 69 MQGLEHPFLVNL---WYSFQDEEDMFM-----VVDLLLGGDLRYHLQQNVHFKEETVKLF 120
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
++ L Y+ R+ HRD+KP N+L+D H V I DF A L + ++
Sbjct: 121 ICELVMALDYLQN-QRIIHRDMKPDNILLDEHGH-VHITDFNIAAMLPRETQITTMAGTK 178
Query: 121 FYRAPELIFG--ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP-- 176
Y APE+ Y+ ++D WS G ELL G+ + ++ EI+ T
Sbjct: 179 PYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS-KEIVHTFETTVV 237
Query: 177 ------TREEI----RCMNPN-------YTDFR-FPQIKAHPWHKVFHKRMPPEAIDLAS 218
++E + + + PN +D + FP + W VF KR+ P I
Sbjct: 238 TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDINWDAVFQKRLIPGFIPNKG 297
Query: 219 RL 220
RL
Sbjct: 298 RL 299
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 103/244 (42%), Gaps = 42/244 (17%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
+R + H NVI+L + + T + L++E V ++ L S ++ ++K
Sbjct: 69 LRQVLHHNVITLHDVYENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIK- 122
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQN-LLVD---PLTHQVKICDFGSAKQLIAGEANIS 115
QI G+ Y+HT ++ H DLKP+N +L+D P+ H +K+ DFG A ++ G +
Sbjct: 123 ---QILDGVNYLHT-KKIAHFDLKPENIMLLDKNIPIPH-IKLIDFGLAHEIEDGVEFKN 177
Query: 116 YICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 175
+ + APE++ D+WS G + LL G F G+ + L I V
Sbjct: 178 IFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV--- 233
Query: 176 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ + + F + A D +LL R T EA
Sbjct: 234 ----------------------SYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEAL 271
Query: 236 AHPF 239
HP+
Sbjct: 272 RHPW 275
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 102/244 (41%), Gaps = 42/244 (17%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
+R + H NVI+L + +N + L++E V ++ L S ++ ++K
Sbjct: 69 LRQVLHHNVITLHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK- 122
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQN-LLVD---PLTHQVKICDFGSAKQLIAGEANIS 115
QI G+ Y+HT ++ H DLKP+N +L+D P+ H +K+ DFG A ++ G +
Sbjct: 123 ---QILDGVNYLHT-KKIAHFDLKPENIMLLDKNIPIPH-IKLIDFGLAHEIEDGVEFKN 177
Query: 116 YICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 175
+ + APE++ D+WS G + LL G F G+ + L I V
Sbjct: 178 IFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV--- 233
Query: 176 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ + + F A D +LL R T EA
Sbjct: 234 ----------------------SYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEAL 271
Query: 236 AHPF 239
HP+
Sbjct: 272 RHPW 275
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 103/244 (42%), Gaps = 42/244 (17%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
+R + H NVI+L + +N + L++E V ++ L S ++ ++K
Sbjct: 69 LRQVLHHNVITLHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK- 122
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQN-LLVD---PLTHQVKICDFGSAKQLIAGEANIS 115
QI G+ Y+HT ++ H DLKP+N +L+D P+ H +K+ DFG A ++ G +
Sbjct: 123 ---QILDGVNYLHT-KKIAHFDLKPENIMLLDKNIPIPH-IKLIDFGLAHEIEDGVEFKN 177
Query: 116 YICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 175
+ + APE++ D+WS G + LL G F G+ + L I V
Sbjct: 178 IFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV--- 233
Query: 176 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ + + F + A D +LL R T EA
Sbjct: 234 ----------------------SYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEAL 271
Query: 236 AHPF 239
HP+
Sbjct: 272 RHPW 275
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 25/166 (15%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
MR ++HPNV+ F K++ LN + EY+ R + S + + P +
Sbjct: 61 MRCLEHPNVLK----FIGVLYKDKR-LNFITEYIKGGTLRGI--IKSMDSQYPWSQRVSF 113
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEAN------- 113
I G+AY+H++ + HRDL N LV V + DFG A+ ++ +
Sbjct: 114 AKDIASGMAYLHSM-NIIHRDLNSHNCLVRE-NKNVVVADFGLARLMVDEKTQPEGLRSL 171
Query: 114 --------ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ + + ++ APE+I G + Y +D++S G VL E++
Sbjct: 172 KKPDRKKRYTVVGNPYWMAPEMINGRS-YDEKVDVFSFGIVLCEII 216
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 14/156 (8%)
Query: 5 DHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQI 64
DHP ++ L ++ L +++E+ P + P I V Q+
Sbjct: 74 DHPYIVKLLGAYYHDGK-----LWIMIEFCPGGAVDAIMLELDRGLTEPQIQV--VCRQM 126
Query: 65 FRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG-SAKQLIAGEANISYICSRFYR 123
L ++H+ R+ HRDLK N+L+ L +++ DFG SAK L + S+I + ++
Sbjct: 127 LEALNFLHS-KRIIHRDLKAGNVLM-TLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWM 184
Query: 124 APELIF----GATEYTTSIDIWSAGCVLAELLLGQP 155
APE++ T Y DIWS G L E+ +P
Sbjct: 185 APEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEP 220
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 14/156 (8%)
Query: 5 DHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQI 64
DHP ++ L ++ L +++E+ P + P I V Q+
Sbjct: 66 DHPYIVKLLGAYYHDGK-----LWIMIEFCPGGAVDAIMLELDRGLTEPQIQV--VCRQM 118
Query: 65 FRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG-SAKQLIAGEANISYICSRFYR 123
L ++H+ R+ HRDLK N+L+ L +++ DFG SAK L + S+I + ++
Sbjct: 119 LEALNFLHS-KRIIHRDLKAGNVLM-TLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWM 176
Query: 124 APELIF----GATEYTTSIDIWSAGCVLAELLLGQP 155
APE++ T Y DIWS G L E+ +P
Sbjct: 177 APEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEP 212
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 25/179 (13%)
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPL--THQVKICDFGSAKQLIAGEANISYICSRF 121
I + Y+H++ + HRD+KP+NLL +K+ DFG AK+ + + + + +
Sbjct: 170 IGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 228
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y APE + G +Y S D+WS G ++ LL G P F + + + + I
Sbjct: 229 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRI 279
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
R + FP + W +V E L LL+ P+ R T E HP+
Sbjct: 280 R-----MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 325
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 25/179 (13%)
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPL--THQVKICDFGSAKQLIAGEANISYICSRF 121
I + Y+H++ + HRD+KP+NLL +K+ DFG AK+ + + + + +
Sbjct: 131 IGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 189
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y APE + G +Y S D+WS G ++ LL G P F + + + + I
Sbjct: 190 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRI 240
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
R + FP + W +V E L LL+ P+ R T E HP+
Sbjct: 241 R-----MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 286
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 25/179 (13%)
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPL--THQVKICDFGSAKQLIAGEANISYICSRF 121
I + Y+H++ + HRD+KP+NLL +K+ DFG AK+ + + + + +
Sbjct: 176 IGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 234
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y APE + G +Y S D+WS G ++ LL G P F + + + + I
Sbjct: 235 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRI 285
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
R + FP + W +V E L LL+ P+ R T E HP+
Sbjct: 286 R-----MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 331
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 25/179 (13%)
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPL--THQVKICDFGSAKQLIAGEANISYICSRF 121
I + Y+H++ + HRD+KP+NLL +K+ DFG AK+ + + + + +
Sbjct: 130 IGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 188
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y APE + G +Y S D+WS G ++ LL G P F + + + + I
Sbjct: 189 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRI 239
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
R + FP + W +V E L LL+ P+ R T E HP+
Sbjct: 240 R-----MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 285
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 25/179 (13%)
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPL--THQVKICDFGSAKQLIAGEANISYICSRF 121
I + Y+H++ + HRD+KP+NLL +K+ DFG AK+ + + + + +
Sbjct: 125 IGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 183
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y APE + G +Y S D+WS G ++ LL G P F + + + + I
Sbjct: 184 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRI 234
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
R + FP + W +V E L LL+ P+ R T E HP+
Sbjct: 235 R-----MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 280
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 25/179 (13%)
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPL--THQVKICDFGSAKQLIAGEANISYICSRF 121
I + Y+H++ + HRD+KP+NLL +K+ DFG AK+ + + + + +
Sbjct: 132 IGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 190
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y APE + G +Y S D+WS G ++ LL G P F + + + + I
Sbjct: 191 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRI 241
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
R + FP + W +V E L LL+ P+ R T E HP+
Sbjct: 242 R-----MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 287
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 25/179 (13%)
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPL--THQVKICDFGSAKQLIAGEANISYICSRF 121
I + Y+H++ + HRD+KP+NLL +K+ DFG AK+ + + + + +
Sbjct: 126 IGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 184
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y APE + G +Y S D+WS G ++ LL G P F + + + + I
Sbjct: 185 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRI 235
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
R + FP + W +V E L LL+ P+ R T E HP+
Sbjct: 236 R-----MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 25/179 (13%)
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPL--THQVKICDFGSAKQLIAGEANISYICSRF 121
I + Y+H++ + HRD+KP+NLL +K+ DFG AK+ + + + + +
Sbjct: 124 IGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 182
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y APE + G +Y S D+WS G ++ LL G P F + + + + I
Sbjct: 183 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRI 233
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
R + FP + W +V E L LL+ P+ R T E HP+
Sbjct: 234 R-----MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 102/244 (41%), Gaps = 42/244 (17%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
+R + H NVI+L + +N + L++E V ++ L S ++ ++K
Sbjct: 69 LRQVLHHNVITLHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK- 122
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQN-LLVD---PLTHQVKICDFGSAKQLIAGEANIS 115
QI G+ Y+HT ++ H DLKP+N +L+D P+ H +K+ DFG A ++ G +
Sbjct: 123 ---QILDGVNYLHT-KKIAHFDLKPENIMLLDKNIPIPH-IKLIDFGLAHEIEDGVEFKN 177
Query: 116 YICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 175
+ + APE++ D+WS G + LL G F G+ + L I V
Sbjct: 178 IFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV--- 233
Query: 176 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ + + F A D +LL R T EA
Sbjct: 234 ----------------------SYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEAL 271
Query: 236 AHPF 239
HP+
Sbjct: 272 RHPW 275
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 102/244 (41%), Gaps = 42/244 (17%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
+R + H NVI+L + +N + L++E V ++ L S ++ ++K
Sbjct: 69 LRQVLHHNVITLHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK- 122
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQN-LLVD---PLTHQVKICDFGSAKQLIAGEANIS 115
QI G+ Y+HT ++ H DLKP+N +L+D P+ H +K+ DFG A ++ G +
Sbjct: 123 ---QILDGVNYLHT-KKIAHFDLKPENIMLLDKNIPIPH-IKLIDFGLAHEIEDGVEFKN 177
Query: 116 YICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 175
+ + APE++ D+WS G + LL G F G+ + L I V
Sbjct: 178 IFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV--- 233
Query: 176 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
++ + + F A D +LL R T EA
Sbjct: 234 ----------------------SYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEAL 271
Query: 236 AHPF 239
HP+
Sbjct: 272 RHPW 275
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 25/179 (13%)
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPL--THQVKICDFGSAKQLIAGEANISYICSRF 121
I + Y+H++ + HRD+KP+NLL +K+ DFG AK+ + + + + +
Sbjct: 126 IGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 184
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y APE + G +Y S D+WS G ++ LL G P F + + + + I
Sbjct: 185 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRI 235
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
R + FP + W +V E L LL+ P+ R T E HP+
Sbjct: 236 R-----MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 25/179 (13%)
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPL--THQVKICDFGSAKQLIAGEANISYICSRF 121
I + Y+H++ + HRD+KP+NLL +K+ DFG AK+ + + + + +
Sbjct: 140 IGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 198
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y APE + G +Y S D+WS G ++ LL G P F + + + + I
Sbjct: 199 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRI 249
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
R + FP + W +V E L LL+ P+ R T E HP+
Sbjct: 250 R-----MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 295
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 94/193 (48%), Gaps = 16/193 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKL 59
MR +PN+++ + +EL++ VMEY+ S+ V+ ++ +
Sbjct: 71 MRENKNPNIVNYLDSYLVG---DELWV--VMEYLAGGSLTDVVTETCMDEGQIAAV---- 121
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ + L ++H+ +V HRD+K N+L+ + VK+ DFG Q+ ++ S +
Sbjct: 122 -CRECLQALEFLHS-NQVIHRDIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSXMVG 178
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 178
++ APE++ Y +DIWS G + E++ G+P + EN + L +I GTP
Sbjct: 179 TPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPEL 236
Query: 179 EEIRCMNPNYTDF 191
+ ++ + DF
Sbjct: 237 QNPEKLSAIFRDF 249
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 94/193 (48%), Gaps = 16/193 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKL 59
MR +PN+++ + +EL++ VMEY+ S+ V+ ++ +
Sbjct: 71 MRENKNPNIVNYLDSYLVG---DELWV--VMEYLAGGSLTDVVTETCMDEGQIAAV---- 121
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ + L ++H+ +V HRD+K N+L+ + VK+ DFG Q+ ++ S +
Sbjct: 122 -CRECLQALEFLHS-NQVIHRDIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSTMVG 178
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 178
++ APE++ Y +DIWS G + E++ G+P + EN + L +I GTP
Sbjct: 179 TPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPEL 236
Query: 179 EEIRCMNPNYTDF 191
+ ++ + DF
Sbjct: 237 QNPEKLSAIFRDF 249
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 94/193 (48%), Gaps = 16/193 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKL 59
MR +PN+++ + +EL++ VMEY+ S+ V+ ++ +
Sbjct: 71 MRENKNPNIVNYLDSYLVG---DELWV--VMEYLAGGSLTDVVTETCMDEGQIAAV---- 121
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ + L ++H+ +V HRD+K N+L+ + VK+ DFG Q+ ++ S +
Sbjct: 122 -CRECLQALEFLHS-NQVIHRDIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSEMVG 178
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 178
++ APE++ Y +DIWS G + E++ G+P + EN + L +I GTP
Sbjct: 179 TPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPEL 236
Query: 179 EEIRCMNPNYTDF 191
+ ++ + DF
Sbjct: 237 QNPEKLSAIFRDF 249
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 57 VKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISY 116
++ Y +I GL ++H V +RDLKP N+L+D H V+I D G A + + S
Sbjct: 294 MRFYAAEIILGLEHMHN-RFVVYRDLKPANILLDEHGH-VRISDLGLACDFSKKKPHAS- 350
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQ 165
+ + Y APE++ Y +S D +S GC+L +LL G F D+
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 57 VKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISY 116
++ Y +I GL ++H V +RDLKP N+L+D H V+I D G A + + S
Sbjct: 293 MRFYAAEIILGLEHMHN-RFVVYRDLKPANILLDEHGH-VRISDLGLACDFSKKKPHAS- 349
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQ 165
+ + Y APE++ Y +S D +S GC+L +LL G F D+
Sbjct: 350 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 398
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 94/193 (48%), Gaps = 16/193 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKL 59
MR +PN+++ + +EL++ VMEY+ S+ V+ ++ +
Sbjct: 72 MRENKNPNIVNYLDSYLVG---DELWV--VMEYLAGGSLTDVVTETCMDEGQIAAV---- 122
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ + L ++H+ +V HRD+K N+L+ + VK+ DFG Q+ ++ S +
Sbjct: 123 -CRECLQALEFLHS-NQVIHRDIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSXMVG 179
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 178
++ APE++ Y +DIWS G + E++ G+P + EN + L +I GTP
Sbjct: 180 TPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPEL 237
Query: 179 EEIRCMNPNYTDF 191
+ ++ + DF
Sbjct: 238 QNPEKLSAIFRDF 250
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 57 VKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISY 116
++ Y +I GL ++H V +RDLKP N+L+D H V+I D G A + + S
Sbjct: 294 MRFYAAEIILGLEHMHN-RFVVYRDLKPANILLDEHGH-VRISDLGLACDFSKKKPHAS- 350
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQ 165
+ + Y APE++ Y +S D +S GC+L +LL G F D+
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 57 VKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISY 116
++ Y +I GL ++H V +RDLKP N+L+D H V+I D G A + + S
Sbjct: 294 MRFYAAEIILGLEHMHN-RFVVYRDLKPANILLDEHGH-VRISDLGLACDFSKKKPHAS- 350
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQ 165
+ + Y APE++ Y +S D +S GC+L +LL G F D+
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 80/189 (42%), Gaps = 31/189 (16%)
Query: 68 LAYIHTVPRVCHRDLKPQNLLVDP--LTHQVKICDF--GSAKQLIAGEANISY------I 117
L ++HT + HRDLKP+N+L + VKICDF GS +L I+
Sbjct: 124 LDFLHT-KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPC 182
Query: 118 CSRFYRAPELI----FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVD---QLVEII 170
S Y APE++ AT Y D+WS G VL +L G P F G D E+
Sbjct: 183 GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVC 242
Query: 171 KVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 230
+V E I+ + D + I + EA DL S+LL R +
Sbjct: 243 RVCQNKLFESIQEGKYEFPDKDWAHISS-------------EAKDLISKLLVRDAKQRLS 289
Query: 231 ALEACAHPF 239
A + HP+
Sbjct: 290 AAQVLQHPW 298
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 75/160 (46%), Gaps = 24/160 (15%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYR--VLKHYSSANQRMPLIYVK 58
+R + H +++ K C + E + LVMEYVP R + +H Q +
Sbjct: 64 LRTLYHEHIVKYKGC---CEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLL------ 114
Query: 59 LYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG-------E 111
L+ QI G+AY+H + HR L +N+L+D VKI DFG AK + G E
Sbjct: 115 LFAQQICEGMAYLHAQHYI-HRALAARNVLLDN-DRLVKIGDFGLAKAVPEGHEYYRVRE 172
Query: 112 ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
S + F+ APE + Y S D+WS G L ELL
Sbjct: 173 DGDSPV---FWYAPECLKECKFYYAS-DVWSFGVTLYELL 208
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 25/179 (13%)
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPL--THQVKICDFGSAKQLIAGEANISYICSRF 121
I + Y+H++ + HRD+KP+NLL +K+ DFG AK+ + + + +
Sbjct: 124 IGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPY 182
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y APE + G +Y S D+WS G ++ LL G P F + + + + I
Sbjct: 183 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRI 233
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
R + FP + W +V E L LL+ P+ R T E HP+
Sbjct: 234 R-----MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 75/160 (46%), Gaps = 24/160 (15%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYR--VLKHYSSANQRMPLIYVK 58
+R + H +++ K C + E + LVMEYVP R + +H Q +
Sbjct: 65 LRTLYHEHIVKYKGC---CEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLL------ 115
Query: 59 LYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG-------E 111
L+ QI G+AY+H + HR L +N+L+D VKI DFG AK + G E
Sbjct: 116 LFAQQICEGMAYLHAQHYI-HRALAARNVLLDN-DRLVKIGDFGLAKAVPEGHEYYRVRE 173
Query: 112 ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
S + F+ APE + Y S D+WS G L ELL
Sbjct: 174 DGDSPV---FWYAPECLKECKFYYAS-DVWSFGVTLYELL 209
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 33/201 (16%)
Query: 5 DHPNVISLKHCFFSTTSKNELFLNLVMEY-----VPESMYRVLKHYSSANQRMPLIYVKL 59
DHPN++ L F+ +N L+ +++E+ V M + + + + +++
Sbjct: 92 DHPNIVKLLDAFY---YENNLW--ILIEFCAGGAVDAVMLELERPLTESQ-------IQV 139
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG-SAKQLIAGEANISYIC 118
Q L Y+H ++ HRDLK N+L L +K+ DFG SAK + S+I
Sbjct: 140 VCKQTLDALNYLHD-NKIIHRDLKAGNILF-TLDGDIKLADFGVSAKNTRTIQRRDSFIG 197
Query: 119 SRFYRAPELIFGATE----YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIK--- 171
+ ++ APE++ T Y D+WS G L E+ +P N + L++I K
Sbjct: 198 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEP 257
Query: 172 -VLGTPTREEIRCMNPNYTDF 191
L P+R + N+ DF
Sbjct: 258 PTLAQPSR-----WSSNFKDF 273
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 33/201 (16%)
Query: 5 DHPNVISLKHCFFSTTSKNELFLNLVMEY-----VPESMYRVLKHYSSANQRMPLIYVKL 59
DHPN++ L F+ +N L+ +++E+ V M + + + + +++
Sbjct: 92 DHPNIVKLLDAFY---YENNLW--ILIEFCAGGAVDAVMLELERPLTESQ-------IQV 139
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG-SAKQLIAGEANISYIC 118
Q L Y+H ++ HRDLK N+L L +K+ DFG SAK + S+I
Sbjct: 140 VCKQTLDALNYLHD-NKIIHRDLKAGNILF-TLDGDIKLADFGVSAKNTRXIQRRDSFIG 197
Query: 119 SRFYRAPELIFGATE----YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIK--- 171
+ ++ APE++ T Y D+WS G L E+ +P N + L++I K
Sbjct: 198 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEP 257
Query: 172 -VLGTPTREEIRCMNPNYTDF 191
L P+R + N+ DF
Sbjct: 258 PTLAQPSR-----WSSNFKDF 273
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 30/207 (14%)
Query: 3 VMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTY 62
+M+H N+ T+ + LVMEY P L Y S + + +L +
Sbjct: 63 LMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNG---SLXKYLSLHTSDWVSSCRL-AH 118
Query: 63 QIFRGLAYIHT--------VPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA----- 109
+ RGLAY+HT P + HRDL +N+LV V I DFG + +L
Sbjct: 119 SVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV-ISDFGLSMRLTGNRLVR 177
Query: 110 -GE---ANISYICSRFYRAPELIFGATEYTT------SIDIWSAGCVLAELLLG-QPLFP 158
GE A IS + + Y APE++ GA +D+++ G + E+ + LFP
Sbjct: 178 PGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFP 237
Query: 159 GENAVD-QLVEIIKVLGTPTREEIRCM 184
GE+ + Q+ +V PT E+++ +
Sbjct: 238 GESVPEYQMAFQTEVGNHPTFEDMQVL 264
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 111/253 (43%), Gaps = 41/253 (16%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
MR H NV+ + + S +EL++ VME++ + ++ N+ +
Sbjct: 96 MRDYHHDNVVDM---YSSYLVGDELWV--VMEFLEGGALTDIVTHTRMNEEQ----IATV 146
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEA--NISYIC 118
+ R L+Y+H V HRD+K ++L+ ++K+ DFG Q ++ E +
Sbjct: 147 CLSVLRALSYLHN-QGVIHRDIKSDSILLTS-DGRIKLSDFGFCAQ-VSKEVPKRKXLVG 203
Query: 119 SRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 178
+ ++ APE+I Y T +DIWS G ++ E++ G+P + E + +
Sbjct: 204 TPYWMAPEVI-SRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAM------------ 250
Query: 179 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHP 238
IR P P++K HKV + +DL +L PS R TA E HP
Sbjct: 251 RRIRDSLP-------PRVK--DLHKV--SSVLRGFLDL---MLVREPSQRATAQELLGHP 296
Query: 239 FFDELREPNARLP 251
F P+ +P
Sbjct: 297 FLKLAGPPSCIVP 309
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 94/187 (50%), Gaps = 21/187 (11%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQI 64
HP+++ + + T + +VMEYV +S+ R S Q++P+ Y +I
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKR------SKGQKLPVAEAIAYLLEI 191
Query: 65 FRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYI-CSRFYR 123
L+Y+H++ V + DLKP+N+++ Q+K+ D G+ ++ + Y+ + ++
Sbjct: 192 LPALSYLHSIGLV-YNDLKPENIML--TEEQLKLIDLGAVSRI----NSFGYLYGTPGFQ 244
Query: 124 APELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVE---IIKVLGTPTREE 180
APE++ T T + DI++ G LA L L P G VD L E ++K + R
Sbjct: 245 APEIV--RTGPTVATDIYTVGRTLAALTLDLPTRNGRY-VDGLPEDDPVLKTYDSYGRLL 301
Query: 181 IRCMNPN 187
R ++P+
Sbjct: 302 RRAIDPD 308
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 68/136 (50%), Gaps = 12/136 (8%)
Query: 27 LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQN 86
L LVME+ L + N + ++ +I RGL+++H +V HRD+K QN
Sbjct: 102 LWLVMEFCGAGSVTDLIKNTKGNT-LKEEWIAYICREILRGLSHLHQ-HKVIHRDIKGQN 159
Query: 87 LLVDPLTHQVKICDFGSAKQL--IAGEANISYICSRFYRAPELIF-----GATEYTTSID 139
+L+ +VK+ DFG + QL G N ++I + ++ APE+I AT Y D
Sbjct: 160 VLLTE-NAEVKLVDFGVSAQLDRTVGRRN-TFIGTPYWMAPEVIACDENPDAT-YDFKSD 216
Query: 140 IWSAGCVLAELLLGQP 155
+WS G E+ G P
Sbjct: 217 LWSLGITAIEMAEGAP 232
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 105/251 (41%), Gaps = 40/251 (15%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSAN-----QRMPLIYVK 58
++H N+I + F +N+ F LVME KH S + R P +
Sbjct: 86 VEHANIIKVLDIF-----ENQGFFQLVME----------KHGSGLDLFAFIDRHPRLDEP 130
Query: 59 LYTY---QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS 115
L +Y Q+ + Y+ + + HRD+K +N+++ +K+ DFGSA L G+ +
Sbjct: 131 LASYIFRQLVSAVGYLR-LKDIIHRDIKDENIVIAE-DFTIKLIDFGSAAYLERGKLFYT 188
Query: 116 YICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVD---------- 164
+ + Y APE++ G +++WS G L L+ + P E V+
Sbjct: 189 FCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLVS 248
Query: 165 -QLVEIIKVLGTPTREEIRCMNPNYTDFRFPQ---IKAHPWHKVFHKRMPPEAIDLASRL 220
+L+ ++ L P E + TD Q + + W +VF P + A+ L
Sbjct: 249 KELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVNLADYTWEEVFRVNKPESGVLSAASL 308
Query: 221 LQYSPSLRCTA 231
+ SL A
Sbjct: 309 EMGNRSLSDVA 319
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 11/106 (10%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ--VKICDFGSAKQLIAGEANISYI 117
+ YQ+ +G+ ++ HRDL +N+LV TH VKICDFG A+ +++ +
Sbjct: 177 FAYQVAKGMEFLE-FKSCVHRDLAARNVLV---THGKVVKICDFGLARDIMSDSNYVVRG 232
Query: 118 CSRF---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPG 159
+R + APE +F YT D+WS G +L E+ LG +PG
Sbjct: 233 NARLPVKWMAPESLFEGI-YTIKSDVWSYGILLWEIFSLGVNPYPG 277
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 21/169 (12%)
Query: 19 TTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVC 78
T K + L + EY L H + NQ+ Y +L+ QI L+YIH+ +
Sbjct: 82 TAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDE-YWRLFR-QILEALSYIHS-QGII 138
Query: 79 HRDLKPQNLLVDPLTHQVKICDFGSAK-------------QLIAGEAN--ISYICSRFYR 123
HR+LKP N+ +D + VKI DFG AK Q + G ++ S I + Y
Sbjct: 139 HRNLKPXNIFIDE-SRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYV 197
Query: 124 APELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV 172
A E++ G Y ID +S G + E + P G V+ L ++ V
Sbjct: 198 ATEVLDGTGHYNEKIDXYSLGIIFFEXIY--PFSTGXERVNILKKLRSV 244
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 78/181 (43%), Gaps = 25/181 (13%)
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ--VKICDFGSAKQLIAGEANISYICSRF 121
I + Y+H++ + HRD+KP+NLL +K+ DFG AK+ + + + + +
Sbjct: 170 IGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 228
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
Y APE + G +Y S D WS G + LL G P F + + + + I
Sbjct: 229 YVAPE-VLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGL--------AISPGXKTRI 279
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 241
R + FP + W +V E L LL+ P+ R T E HP+
Sbjct: 280 R-----XGQYEFPNPE---WSEV-----SEEVKXLIRNLLKTEPTQRXTITEFXNHPWIX 326
Query: 242 E 242
+
Sbjct: 327 Q 327
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 94/193 (48%), Gaps = 16/193 (8%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKL 59
MR +PN+++ + +EL++ VMEY+ S+ V+ ++ +
Sbjct: 72 MRENKNPNIVNYLDSYLVG---DELWV--VMEYLAGGSLTDVVTETCMDEGQIAAV---- 122
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ + L ++H+ +V HR++K N+L+ + VK+ DFG Q+ ++ S +
Sbjct: 123 -CRECLQALEFLHS-NQVIHRNIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSTMVG 179
Query: 120 R-FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 178
++ APE++ Y +DIWS G + E++ G+P + EN + L +I GTP
Sbjct: 180 TPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPEL 237
Query: 179 EEIRCMNPNYTDF 191
+ ++ + DF
Sbjct: 238 QNPEKLSAIFRDF 250
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Query: 27 LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQN 86
L LVM+Y +L S R+P + Y ++ + +H + V HRD+KP N
Sbjct: 149 LYLVMDYYVGG--DLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYV-HRDIKPDN 205
Query: 87 LLVDPLTHQVKICDFGSAKQLIAGEANISYIC--SRFYRAPELI----FGATEYTTSIDI 140
+L+D H +++ DFGS +L+ S + + Y +PE++ G Y D
Sbjct: 206 ILMDMNGH-IRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDW 264
Query: 141 WSAGCVLAELLLGQPLFPGENAVDQLVEII 170
WS G + E+L G+ F E+ V+ +I+
Sbjct: 265 WSLGVCMYEMLYGETPFYAESLVETYGKIM 294
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 107/246 (43%), Gaps = 44/246 (17%)
Query: 5 DHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQI 64
+HPNVI + T K+ F + +E ++ ++ A+ + I + Q
Sbjct: 76 EHPNVIR-----YFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITL---LQQT 127
Query: 65 FRGLAYIHTVPRVCHRDLKPQNLLVD-PLTH---QVKICDFGSAKQLIAGEANISYIC-- 118
GLA++H++ + HRDLKP N+L+ P H + I DFG K+L G + S
Sbjct: 128 TSGLAHLHSL-NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGV 186
Query: 119 --SRFYRAPELIFGATEY--TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG 174
+ + APE++ + T ++DI+SAGCV ++ + P ++ + I+ LG
Sbjct: 187 PGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFY-YVISEGSHPFGKSLQRQANIL--LG 243
Query: 175 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEA 234
+ + C++P K A +L +++ P R +A
Sbjct: 244 ACS---LDCLHPE-------------------KHEDVIARELIEKMIAMDPQKRPSAKHV 281
Query: 235 CAHPFF 240
HPFF
Sbjct: 282 LKHPFF 287
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ +Q+ + + H V HRD+K +N+L+D ++K+ DFGS L+ + +
Sbjct: 120 FFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFDGT 177
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTR 178
R Y PE I + S +WS G +L +++ G P E + V + + + +
Sbjct: 178 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQ 237
Query: 179 EEIR-CMNPNYTDF-RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 233
IR C+ +D F +I+ HPW + +P E ++ L PS + ALE
Sbjct: 238 HLIRWCLALRPSDRPTFEEIQNHPWMQ--DVLLPQETAEIHLHSLSPGPS-KAAALE 291
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 106/269 (39%), Gaps = 45/269 (16%)
Query: 22 KNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRD 81
++E +L LVMEY +L S +R+P + Y +I + +H + V HRD
Sbjct: 131 QDENYLYLVMEYYVGG--DLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYV-HRD 187
Query: 82 LKPQNLLVDPLTHQVKICDFGSAKQLIAGEA--NISYICSRFYRAPELIFGATEYTT--- 136
+KP N+L+D H +++ DFGS +L A ++ + + Y +PE++
Sbjct: 188 IKPDNILLDRCGH-IRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGS 246
Query: 137 ---SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRF 193
D W+ G E+ GQ F ++ + +I+
Sbjct: 247 YGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIV----------------------- 283
Query: 194 PQIKAHPWHKVFHKRMPPEAIDLASRLL--QYSPSLRCTALEACAHPFFDELREPNARLP 251
K H + + +P EA D RLL + R A + HPFF L R
Sbjct: 284 -HYKEHLSLPLVDEGVPEEARDFIQRLLCPPETRLGRGGAGDFRTHPFFFGLDWDGLR-- 340
Query: 252 NGRPLPPLFNFKQELSGASPELVNKLIPD 280
+PP F + GA+ L+ D
Sbjct: 341 --DSVPP---FTPDFEGATDTCNFDLVED 364
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 33/201 (16%)
Query: 5 DHPNVISLKHCFFSTTSKNELFLNLVMEY-----VPESMYRVLKHYSSANQRMPLIYVKL 59
DHPN++ L F+ +N L+ +++E+ V M + + + + +++
Sbjct: 92 DHPNIVKLLDAFY---YENNLW--ILIEFCAGGAVDAVMLELERPLTESQ-------IQV 139
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG-SAKQLIAGEANISYIC 118
Q L Y+H ++ HRDLK N+L L +K+ DFG SAK + +I
Sbjct: 140 VCKQTLDALNYLHD-NKIIHRDLKAGNILF-TLDGDIKLADFGVSAKNTRXIQRRDXFIG 197
Query: 119 SRFYRAPELIFGATE----YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIK--- 171
+ ++ APE++ T Y D+WS G L E+ +P N + L++I K
Sbjct: 198 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEP 257
Query: 172 -VLGTPTREEIRCMNPNYTDF 191
L P+R + N+ DF
Sbjct: 258 PTLAQPSR-----WSSNFKDF 273
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ +Q+ + + H V HRD+K +N+L+D ++K+ DFGS L+ + +
Sbjct: 162 FFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFDGT 219
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTR 178
R Y PE I + S +WS G +L +++ G P E + V + + + +
Sbjct: 220 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQ 279
Query: 179 EEIR-CMNPNYTDF-RFPQIKAHPW 201
IR C+ +D F +I+ HPW
Sbjct: 280 HLIRWCLALRPSDRPTFEEIQNHPW 304
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ +Q+ + + H V HRD+K +N+L+D ++K+ DFGS L+ + +
Sbjct: 147 FFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFDGT 204
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTR 178
R Y PE I + S +WS G +L +++ G P E + V + + + +
Sbjct: 205 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQ 264
Query: 179 EEIR-CMNPNYTDF-RFPQIKAHPW 201
IR C+ +D F +I+ HPW
Sbjct: 265 HLIRWCLALRPSDRPTFEEIQNHPW 289
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ +Q+ + + H V HRD+K +N+L+D ++K+ DFGS L+ + +
Sbjct: 148 FFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFDGT 205
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTR 178
R Y PE I + S +WS G +L +++ G P E + V + + + +
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQ 265
Query: 179 EEIR-CMNPNYTDF-RFPQIKAHPW 201
IR C+ +D F +I+ HPW
Sbjct: 266 HLIRWCLALRPSDRPTFEEIQNHPW 290
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ +Q+ + + H V HRD+K +N+L+D ++K+ DFGS L+ + +
Sbjct: 147 FFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFDGT 204
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTR 178
R Y PE I + S +WS G +L +++ G P E + V + + + +
Sbjct: 205 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQ 264
Query: 179 EEIR-CMNPNYTDF-RFPQIKAHPW 201
IR C+ +D F +I+ HPW
Sbjct: 265 HLIRWCLALRPSDRPTFEEIQNHPW 289
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ +Q+ + + H V HRD+K +N+L+D ++K+ DFGS L+ + +
Sbjct: 148 FFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFDGT 205
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTR 178
R Y PE I + S +WS G +L +++ G P E + V + + + +
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQ 265
Query: 179 EEIR-CMNPNYTDF-RFPQIKAHPW 201
IR C+ +D F +I+ HPW
Sbjct: 266 HLIRWCLALRPSDRPTFEEIQNHPW 290
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
+R + HPN++ T+ L +VMEY + V+ + Q + +V
Sbjct: 59 LRELKHPNIVRYYDRIIDRTNTT---LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLR 115
Query: 60 YTYQIFRGLAYIHTVP----RVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEA-NI 114
Q+ L H V HRDLKP N+ +D VK+ DFG A+ L E
Sbjct: 116 VMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDG-KQNVKLGDFGLARILNHDEDFAK 174
Query: 115 SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF 157
++ + +Y +PE + Y DIWS GC+L EL P F
Sbjct: 175 EFVGTPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 7/113 (6%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA--KQLIAGEANISYIC-S 119
Q RG+ Y+H + HRDLK N+ + + VKI DFG A K +G + S
Sbjct: 116 QTARGMDYLH-AKSIIHRDLKSNNIFLHE-DNTVKIGDFGLATVKSRWSGSHQFEQLSGS 173
Query: 120 RFYRAPELIF--GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
+ APE+I + Y+ D+++ G VL EL+ GQ + N DQ++E++
Sbjct: 174 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 226
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 7/113 (6%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA--KQLIAGEANISYIC-S 119
Q RG+ Y+H + HRDLK N+ + + VKI DFG A K +G + S
Sbjct: 128 QTARGMDYLH-AKSIIHRDLKSNNIFLHE-DNTVKIGDFGLATEKSRWSGSHQFEQLSGS 185
Query: 120 RFYRAPELIF--GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
+ APE+I + Y+ D+++ G VL EL+ GQ + N DQ++E++
Sbjct: 186 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 7/113 (6%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA--KQLIAGEANISYIC-S 119
Q RG+ Y+H + HRDLK N+ + + VKI DFG A K +G + S
Sbjct: 128 QTARGMDYLH-AKSIIHRDLKSNNIFLHE-DNTVKIGDFGLATEKSRWSGSHQFEQLSGS 185
Query: 120 RFYRAPELIF--GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
+ APE+I + Y+ D+++ G VL EL+ GQ + N DQ++E++
Sbjct: 186 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ +Q+ + + H V HRD+K +N+L+D ++K+ DFGS L+ + +
Sbjct: 162 FFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFDGT 219
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTR 178
R Y PE I + S +WS G +L +++ G P E + V + + + +
Sbjct: 220 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQ 279
Query: 179 EEIR-CMNPNYTDF-RFPQIKAHPW 201
IR C+ +D F +I+ HPW
Sbjct: 280 HLIRWCLALRPSDRPTFEEIQNHPW 304
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ +Q+ + + H V HRD+K +N+L+D ++K+ DFGS L+ + +
Sbjct: 147 FFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFDGT 204
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTR 178
R Y PE I + S +WS G +L +++ G P E + V + + + +
Sbjct: 205 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQ 264
Query: 179 EEIR-CMNPNYTDF-RFPQIKAHPW 201
IR C+ +D F +I+ HPW
Sbjct: 265 HLIRWCLALRPSDRPTFEEIQNHPW 289
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ +Q+ + + H V HRD+K +N+L+D ++K+ DFGS L+ + +
Sbjct: 115 FFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFDGT 172
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTR 178
R Y PE I + S +WS G +L +++ G P E + V + + + +
Sbjct: 173 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQ 232
Query: 179 EEIR-CMNPNYTDF-RFPQIKAHPW 201
IR C+ +D F +I+ HPW
Sbjct: 233 HLIRWCLALRPSDRPTFEEIQNHPW 257
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ +Q+ + + H V HRD+K +N+L+D ++K+ DFGS L+ + +
Sbjct: 119 FFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFDGT 176
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTR 178
R Y PE I + S +WS G +L +++ G P E + V + + + +
Sbjct: 177 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQ 236
Query: 179 EEIR-CMNPNYTDF-RFPQIKAHPW 201
IR C+ +D F +I+ HPW
Sbjct: 237 HLIRWCLALRPSDRPTFEEIQNHPW 261
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 5/148 (3%)
Query: 57 VKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISY 116
+ + +Q+ + + H V HRD+K +N+L+D ++K+ DFGS L+ +
Sbjct: 117 ARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDF 174
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGT 175
+R Y PE I + S +WS G +L +++ G P E + V + + +
Sbjct: 175 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS 234
Query: 176 PTREEIR-CMNPNYTDF-RFPQIKAHPW 201
+ IR C+ +D F +I+ HPW
Sbjct: 235 ECQHLIRWCLALRPSDRPTFEEIQNHPW 262
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 5/148 (3%)
Query: 57 VKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISY 116
+ + +Q+ + + H V HRD+K +N+L+D ++K+ DFGS L+ +
Sbjct: 131 ARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDF 188
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGT 175
+R Y PE I + S +WS G +L +++ G P E + V + + +
Sbjct: 189 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS 248
Query: 176 PTREEIR-CMNPNYTDF-RFPQIKAHPW 201
+ IR C+ +D F +I+ HPW
Sbjct: 249 ECQHLIRWCLALRPSDRPTFEEIQNHPW 276
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 5/148 (3%)
Query: 57 VKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISY 116
+ + +Q+ + + H V HRD+K +N+L+D ++K+ DFGS L+ +
Sbjct: 151 ARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDF 208
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGT 175
+R Y PE I + S +WS G +L +++ G P E + V + + +
Sbjct: 209 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS 268
Query: 176 PTREEIR-CMNPNYTDF-RFPQIKAHPW 201
+ IR C+ +D F +I+ HPW
Sbjct: 269 ECQHLIRWCLALRPSDRPTFEEIQNHPW 296
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ +Q+ + + H V HRD+K +N+L+D ++K+ DFGS L+ + +
Sbjct: 120 FFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFDGT 177
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTR 178
R Y PE I + S +WS G +L +++ G P E + V + + + +
Sbjct: 178 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQ 237
Query: 179 EEIR-CMNPNYTDF-RFPQIKAHPW 201
IR C+ +D F +I+ HPW
Sbjct: 238 HLIRWCLALRPSDRPTFEEIQNHPW 262
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 18/167 (10%)
Query: 2 RVMDHPNVISL-KHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
R+ +HPN++ L +C +K+E +L L+ + +++ ++ + +
Sbjct: 81 RLFNHPNILRLVAYCLRERGAKHEAWL-LLPFFKRGTLWNEIERLKDKGNFLTEDQILWL 139
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGS----------AKQLIAG 110
I RGL IH HRDLKP N+L+ V + D GS ++Q +
Sbjct: 140 LLGICRGLEAIHA-KGYAHRDLKPTNILLGDEGQPV-LMDLGSMNQACIHVEGSRQALTL 197
Query: 111 EANISYICSRFYRAPELIFGATEYTT---SIDIWSAGCVLAELLLGQ 154
+ + C+ YRAPEL F + D+WS GCVL ++ G+
Sbjct: 198 QDWAAQRCTISYRAPEL-FSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ +Q+ + + H V HRD+K +N+L+D ++K+ DFGS L+ + +
Sbjct: 118 FFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFDGT 175
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTR 178
R Y PE I + S +WS G +L +++ G P E + V + + + +
Sbjct: 176 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQ 235
Query: 179 EEIR-CMNPNYTDF-RFPQIKAHPW 201
IR C+ +D F +I+ HPW
Sbjct: 236 HLIRWCLALRPSDRPTFEEIQNHPW 260
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ +Q+ + + H V HRD+K +N+L+D ++K+ DFGS L+ + +
Sbjct: 119 FFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFDGT 176
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTR 178
R Y PE I + S +WS G +L +++ G P E + V + + + +
Sbjct: 177 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQ 236
Query: 179 EEIR-CMNPNYTDF-RFPQIKAHPW 201
IR C+ +D F +I+ HPW
Sbjct: 237 HLIRWCLALRPSDRPTFEEIQNHPW 261
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 5/148 (3%)
Query: 57 VKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISY 116
+ + +Q+ + + H V HRD+K +N+L+D ++K+ DFGS L+ +
Sbjct: 132 ARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDF 189
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGT 175
+R Y PE I + S +WS G +L +++ G P E + V + + +
Sbjct: 190 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS 249
Query: 176 PTREEIR-CMNPNYTDF-RFPQIKAHPW 201
+ IR C+ +D F +I+ HPW
Sbjct: 250 ECQHLIRWCLALRPSDRPTFEEIQNHPW 277
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ +Q+ + + H V HRD+K +N+L+D ++K+ DFGS L+ + +
Sbjct: 115 FFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFDGT 172
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTR 178
R Y PE I + S +WS G +L +++ G P E + V + + + +
Sbjct: 173 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQ 232
Query: 179 EEIR-CMNPNYTDF-RFPQIKAHPW 201
IR C+ +D F +I+ HPW
Sbjct: 233 HLIRWCLALRPSDRPTFEEIQNHPW 257
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 18/159 (11%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQI 64
HPN++S + S K+EL+L VM+ + S+ ++KH + + + + I
Sbjct: 72 HPNIVSY---YTSFVVKDELWL--VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 126
Query: 65 FR----GLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG------EANI 114
R GL Y+H ++ HRD+K N+L+ V+I DFG + L G +
Sbjct: 127 LREVLEGLEYLHKNGQI-HRDVKAGNILLGE-DGSVQIADFGVSAFLATGGDITRNKVRK 184
Query: 115 SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLG 153
+++ + + APE++ Y DIWS G EL G
Sbjct: 185 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 223
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 5/145 (3%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ +Q+ + + H V HRD+K +N+L+D ++K+ DFGS L+ + +
Sbjct: 147 FFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFDGT 204
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTR 178
R Y PE I + S +WS G +L +++ G P E + V + + +
Sbjct: 205 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQ 264
Query: 179 EEIR-CMNPNYTDF-RFPQIKAHPW 201
IR C+ +D F +I+ HPW
Sbjct: 265 HLIRWCLALRPSDRPTFEEIQNHPW 289
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 18/159 (11%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIY----VKLY 60
HPN++S + S K+EL+L VM+ + S+ ++KH + + + +
Sbjct: 67 HPNIVSY---YTSFVVKDELWL--VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 121
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG------EANI 114
++ GL Y+H ++ HRD+K N+L+ V+I DFG + L G +
Sbjct: 122 LREVLEGLEYLHKNGQI-HRDVKAGNILLGE-DGSVQIADFGVSAFLATGGDITRNKVRK 179
Query: 115 SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLG 153
+++ + + APE++ Y DIWS G EL G
Sbjct: 180 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 218
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 5/145 (3%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ +Q+ + + H V HRD+K +N+L+D ++K+ DFGS L+ + +
Sbjct: 148 FFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFDGT 205
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTR 178
R Y PE I + S +WS G +L +++ G P E + V + + +
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQ 265
Query: 179 EEIR-CMNPNYTDF-RFPQIKAHPW 201
IR C+ +D F +I+ HPW
Sbjct: 266 HLIRWCLALRPSDRPTFEEIQNHPW 290
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 5/145 (3%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ +Q+ + + H V HRD+K +N+L+D ++K+ DFGS L+ + +
Sbjct: 148 FFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFDGT 205
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTR 178
R Y PE I + S +WS G +L +++ G P E + V + + +
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQ 265
Query: 179 EEIR-CMNPNYTDF-RFPQIKAHPW 201
IR C+ +D F +I+ HPW
Sbjct: 266 HLIRWCLALRPSDRPTFEEIQNHPW 290
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 72/163 (44%), Gaps = 11/163 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
+R + HPN++ T+ L +VMEY + V+ + Q + +V
Sbjct: 59 LRELKHPNIVRYYDRIIDRTNTT---LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLR 115
Query: 60 YTYQIFRGLAYIHTVP----RVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEA-NI 114
Q+ L H V HRDLKP N+ +D VK+ DFG A+ L +
Sbjct: 116 VMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDG-KQNVKLGDFGLARILNHDTSFAK 174
Query: 115 SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF 157
+++ + +Y +PE + Y DIWS GC+L EL P F
Sbjct: 175 TFVGTPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 5/145 (3%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ +Q+ + + H V HRD+K +N+L+D ++K+ DFGS L+ + +
Sbjct: 167 FFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFDGT 224
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTR 178
R Y PE I + S +WS G +L +++ G P E + V + + +
Sbjct: 225 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQ 284
Query: 179 EEIR-CMNPNYTDF-RFPQIKAHPW 201
IR C+ +D F +I+ HPW
Sbjct: 285 HLIRWCLALRPSDRPTFEEIQNHPW 309
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 5/145 (3%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ +Q+ + + H V HRD+K +N+L+D ++K+ DFGS L+ + +
Sbjct: 162 FFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFDGT 219
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTR 178
R Y PE I + S +WS G +L +++ G P E + V + + +
Sbjct: 220 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQ 279
Query: 179 EEIR-CMNPNYTDF-RFPQIKAHPW 201
IR C+ +D F +I+ HPW
Sbjct: 280 HLIRWCLALRPSDRPTFEEIQNHPW 304
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 72/163 (44%), Gaps = 11/163 (6%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKL 59
+R + HPN++ T+ L +VMEY + V+ + Q + +V
Sbjct: 59 LRELKHPNIVRYYDRIIDRTNTT---LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLR 115
Query: 60 YTYQIFRGLAYIHTVP----RVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEA-NI 114
Q+ L H V HRDLKP N+ +D VK+ DFG A+ L +
Sbjct: 116 VMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDG-KQNVKLGDFGLARILNHDTSFAK 174
Query: 115 SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF 157
+++ + +Y +PE + Y DIWS GC+L EL P F
Sbjct: 175 AFVGTPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 5/145 (3%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ +Q+ + + H V HRD+K +N+L+D ++K+ DFGS L+ + +
Sbjct: 115 FFWQVLEAVRHCHNXG-VLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFDGT 172
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTR 178
R Y PE I + S +WS G +L +++ G P E + V + + +
Sbjct: 173 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQ 232
Query: 179 EEIR-CMNPNYTDF-RFPQIKAHPW 201
IR C+ +D F +I+ HPW
Sbjct: 233 HLIRWCLALRPSDRPTFEEIQNHPW 257
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 5/145 (3%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ +Q+ + + H V HRD+K +N+L+D ++K+ DFGS L+ + +
Sbjct: 142 FFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFDGT 199
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTR 178
R Y PE I + S +WS G +L +++ G P E + V + + +
Sbjct: 200 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQ 259
Query: 179 EEIR-CMNPNYTDF-RFPQIKAHPW 201
IR C+ +D F +I+ HPW
Sbjct: 260 HLIRWCLALRPSDRPTFEEIQNHPW 284
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 5/148 (3%)
Query: 57 VKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISY 116
+ + +Q+ + + H V HRD+K +N+L+D ++K+ DFGS L+ +
Sbjct: 132 ARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDF 189
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGT 175
+R Y PE I + S +WS G +L +++ G P E + V + +
Sbjct: 190 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSX 249
Query: 176 PTREEIR-CMNPNYTDF-RFPQIKAHPW 201
+ IR C+ +D F +I+ HPW
Sbjct: 250 ECQHLIRWCLALRPSDRPTFEEIQNHPW 277
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 5/145 (3%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ +Q+ + + H V HRD+K +N+L+D ++K+ DFGS L+ + +
Sbjct: 134 FFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFDGT 191
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTR 178
R Y PE I + S +WS G +L +++ G P E + V + + +
Sbjct: 192 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQ 251
Query: 179 EEIR-CMNPNYTDF-RFPQIKAHPW 201
IR C+ +D F +I+ HPW
Sbjct: 252 HLIRWCLALRPSDRPTFEEIQNHPW 276
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 114/277 (41%), Gaps = 47/277 (16%)
Query: 3 VMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES--MYRVLKHYSSANQRMPLIYVKLY 60
++ HP+++ L + S L +V E++ + + ++K + A Y
Sbjct: 82 MLKHPHIVELLETYSSDG-----MLYMVFEFMDGADLCFEIVKR-ADAGFVYSEAVASHY 135
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ--VKICDFGSAKQLIAGEANI---S 115
QI L Y H + HRD+KP +L+ + VK+ FG A QL GE+ +
Sbjct: 136 MRQILEALRYCHD-NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GESGLVAGG 192
Query: 116 YICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 175
+ + + APE++ Y +D+W G +L LL G F G ++L E I + G
Sbjct: 193 RVGTPHFMAPEVV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGI-IKGK 248
Query: 176 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
MNP W + A DL R+L P+ R T EA
Sbjct: 249 YK------MNPR------------QWSHI-----SESAKDLVRRMLMLDPAERITVYEAL 285
Query: 236 AHPFFDELREPNA---RLPNGRPLPPLFNFKQELSGA 269
HP+ E R+ A LP FN +++L GA
Sbjct: 286 NHPWLKE-RDRYAYKIHLPETVEQLRKFNARRKLKGA 321
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 34/202 (16%)
Query: 5 DHPNVISLKHCFFSTTSKNELFLNLVMEY-----VPESMYRVLKHYSSANQRMPLIYVKL 59
DHPN++ L F+ +N L+ +++E+ V M + + + + +++
Sbjct: 65 DHPNIVKLLDAFY---YENNLW--ILIEFCAGGAVDAVMLELERPLTESQ-------IQV 112
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG-SAKQLIAG-EANISYI 117
Q L Y+H ++ HRDLK N+L L +K+ DFG SAK + S+I
Sbjct: 113 VCKQTLDALNYLHD-NKIIHRDLKAGNILF-TLDGDIKLADFGVSAKNTRTXIQRRDSFI 170
Query: 118 CSRFYRAPELIFGATE----YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIK-- 171
+ ++ APE++ T Y D+WS G L E+ +P N + L++I K
Sbjct: 171 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE 230
Query: 172 --VLGTPTREEIRCMNPNYTDF 191
L P+R + N+ DF
Sbjct: 231 PPTLAQPSR-----WSSNFKDF 247
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 4/131 (3%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPL--THQVKICDFGSAKQLIAGEANISYICSR 120
QI G+ Y+H + H DLKPQN+L+ + +KI DFG ++++ + +
Sbjct: 139 QILEGVYYLHQ-NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTP 197
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 180
Y APE I TT+ D+W+ G + LL F GE+ + + I +V + E
Sbjct: 198 EYLAPE-ILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEET 256
Query: 181 IRCMNPNYTDF 191
++ TDF
Sbjct: 257 FSSVSQLATDF 267
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 21/139 (15%)
Query: 26 FLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKP 84
++N+ ME + S+ +++K + L Y+ Q GL Y+HT R+ H D+K
Sbjct: 140 WVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG----QALEGLEYLHT-RRILHGDVKA 194
Query: 85 QNLLVDPLTHQVKICDFGSA---------KQLIAGEANISYI-CSRFYRAPELIFGATEY 134
N+L+ + +CDFG A K L+ G+ YI + + APE++ G
Sbjct: 195 DNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD----YIPGTETHMAPEVVMGKP-C 249
Query: 135 TTSIDIWSAGCVLAELLLG 153
+DIWS+ C++ +L G
Sbjct: 250 DAKVDIWSSCCMMLHMLNG 268
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 114/277 (41%), Gaps = 47/277 (16%)
Query: 3 VMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPES--MYRVLKHYSSANQRMPLIYVKLY 60
++ HP+++ L + S L +V E++ + + ++K + A Y
Sbjct: 84 MLKHPHIVELLETYSSDG-----MLYMVFEFMDGADLCFEIVKR-ADAGFVYSEAVASHY 137
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ--VKICDFGSAKQLIAGEANI---S 115
QI L Y H + HRD+KP +L+ + VK+ FG A QL GE+ +
Sbjct: 138 MRQILEALRYCHD-NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GESGLVAGG 194
Query: 116 YICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 175
+ + + APE++ Y +D+W G +L LL G F G ++L E I + G
Sbjct: 195 RVGTPHFMAPEVV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGI-IKGK 250
Query: 176 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 235
MNP W + A DL R+L P+ R T EA
Sbjct: 251 YK------MNPR------------QWSHI-----SESAKDLVRRMLMLDPAERITVYEAL 287
Query: 236 AHPFFDELREPNA---RLPNGRPLPPLFNFKQELSGA 269
HP+ E R+ A LP FN +++L GA
Sbjct: 288 NHPWLKE-RDRYAYKIHLPETVEQLRKFNARRKLKGA 323
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 21/139 (15%)
Query: 26 FLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKP 84
++N+ ME + S+ +++K + L Y+ Q GL Y+HT R+ H D+K
Sbjct: 138 WVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG----QALEGLEYLHT-RRILHGDVKA 192
Query: 85 QNLLVDPLTHQVKICDFGSA---------KQLIAGEANISYI-CSRFYRAPELIFGATEY 134
N+L+ + +CDFG A K L+ G+ YI + + APE++ G
Sbjct: 193 DNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD----YIPGTETHMAPEVVMGKP-C 247
Query: 135 TTSIDIWSAGCVLAELLLG 153
+DIWS+ C++ +L G
Sbjct: 248 DAKVDIWSSCCMMLHMLNG 266
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 21/139 (15%)
Query: 26 FLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKP 84
++N+ ME + S+ +++K + L Y+ Q GL Y+HT R+ H D+K
Sbjct: 124 WVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG----QALEGLEYLHT-RRILHGDVKA 178
Query: 85 QNLLVDPLTHQVKICDFGSA---------KQLIAGEANISYI-CSRFYRAPELIFGATEY 134
N+L+ + +CDFG A K L+ G+ YI + + APE++ G
Sbjct: 179 DNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD----YIPGTETHMAPEVVMGKP-C 233
Query: 135 TTSIDIWSAGCVLAELLLG 153
+DIWS+ C++ +L G
Sbjct: 234 DAKVDIWSSCCMMLHMLNG 252
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 10/155 (6%)
Query: 22 KNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRD 81
++E L LVM+Y +L S ++P + Y ++ + IH + V HRD
Sbjct: 144 QDENHLYLVMDYYVGG--DLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYV-HRD 200
Query: 82 LKPQNLLVDPLTHQVKICDFGSA-KQLIAGEANISY-ICSRFYRAPELI----FGATEYT 135
+KP N+L+D H +++ DFGS K G S + + Y +PE++ G +Y
Sbjct: 201 IKPDNVLLDVNGH-IRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYG 259
Query: 136 TSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
D WS G + E+L G+ F E+ V+ +I+
Sbjct: 260 PECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 294
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 10/155 (6%)
Query: 22 KNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRD 81
++E L LVM+Y +L S ++P + Y ++ + IH + V HRD
Sbjct: 160 QDENHLYLVMDYYVGG--DLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYV-HRD 216
Query: 82 LKPQNLLVDPLTHQVKICDFGSA-KQLIAGEANISY-ICSRFYRAPELI----FGATEYT 135
+KP N+L+D H +++ DFGS K G S + + Y +PE++ G +Y
Sbjct: 217 IKPDNVLLDVNGH-IRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYG 275
Query: 136 TSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
D WS G + E+L G+ F E+ V+ +I+
Sbjct: 276 PECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 310
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 80/173 (46%), Gaps = 37/173 (21%)
Query: 2 RVMDHPNVISLKHCFFSTTSKNEL------FLNLVMEYVPESMYRVLKHYSSANQRMPL- 54
++ HPN++ C ++ K E FL L+ E + LK S R PL
Sbjct: 81 KLSGHPNIVQF--CSAASIGKEESDTGQAEFL-LLTELCKGQLVEFLKKMES---RGPLS 134
Query: 55 --IYVKLYTYQIFRGLAYIH-TVPRVCHRDLKPQNLLVDPLTHQ--VKICDFGSAKQL-- 107
+K++ YQ R + ++H P + HRDLK +NLL L++Q +K+CDFGSA +
Sbjct: 135 CDTVLKIF-YQTCRAVQHMHRQKPPIIHRDLKVENLL---LSNQGTIKLCDFGSATTISH 190
Query: 108 -----------IAGEANISYICSRFYRAPELIFGATEY--TTSIDIWSAGCVL 147
E I+ + YR PE+I + + DIW+ GC+L
Sbjct: 191 YPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 9/165 (5%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
++ + HPN++ + ST K + + LV E LK Y + + ++ +
Sbjct: 79 LKGLQHPNIVRFYDSWESTV-KGKKCIVLVTELXTSG---TLKTYLKRFKVXKIKVLRSW 134
Query: 61 TYQIFRGLAYIHT-VPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
QI +GL ++HT P + HRDLK N+ + T VKI D G A A A + I +
Sbjct: 135 CRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK-AVIGT 193
Query: 120 RFYRAPELIFGATEYTTSIDIWSAG-CVLAELLLGQPLFPGENAV 163
+ APE +Y S+D+++ G C L P +NA
Sbjct: 194 PEFXAPEXY--EEKYDESVDVYAFGXCXLEXATSEYPYSECQNAA 236
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 5/145 (3%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ +Q+ + + H V HRD+K +N+L+D ++K+ DFGS L+ + +
Sbjct: 135 FFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFDGT 192
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTR 178
R Y PE I + S +WS G +L +++ G P E + V + + +
Sbjct: 193 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQ 252
Query: 179 EEIR-CMNPNYTDF-RFPQIKAHPW 201
IR C+ D F +I+ HPW
Sbjct: 253 HLIRWCLALRPXDRPTFEEIQNHPW 277
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 7/104 (6%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ +QI +G+ Y+ + ++ HRDL +N+LV ++KI DFG ++ + ++ +
Sbjct: 155 FAWQISQGMQYLAEM-KLVHRDLAARNILVAE-GRKMKISDFGLSRDVYEEDSXVKRSQG 212
Query: 120 RF---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPG 159
R + A E +F YTT D+WS G +L E++ LG +PG
Sbjct: 213 RIPVKWMAIESLFDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 16/160 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M MDHP+++ L S T + LV + +P H N L+ +
Sbjct: 71 MASMDHPHLVRLLGVCLSPT------IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLN--W 122
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI +G+ Y+ R+ HRDL +N+LV H VKI DFG A+ L E + +
Sbjct: 123 CVQIAKGMMYLEE-RRLVHRDLAARNVLVKSPNH-VKITDFGLARLLEGDEKEYNADGGK 180
Query: 121 F---YRAPELIFGATEYTTSIDIWSAGCVLAELLL--GQP 155
+ A E I ++T D+WS G + EL+ G+P
Sbjct: 181 MPIKWMALECIH-YRKFTHQSDVWSYGVTIWELMTFGGKP 219
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 16/160 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M MDHP+++ L S T + LV + +P H N L+ +
Sbjct: 94 MASMDHPHLVRLLGVCLSPT------IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLN--W 145
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI +G+ Y+ R+ HRDL +N+LV H VKI DFG A+ L E + +
Sbjct: 146 CVQIAKGMMYLEE-RRLVHRDLAARNVLVKSPNH-VKITDFGLARLLEGDEKEYNADGGK 203
Query: 121 F---YRAPELIFGATEYTTSIDIWSAGCVLAELLL--GQP 155
+ A E I ++T D+WS G + EL+ G+P
Sbjct: 204 MPIKWMALECIH-YRKFTHQSDVWSYGVTIWELMTFGGKP 242
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 19/157 (12%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
MR DHP+++ L ++N +++ +ME R + + L + LY
Sbjct: 445 MRQFDHPHIVKL----IGVITENPVWI--IMELCTLGELRSFLQVRKFS--LDLASLILY 496
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
YQ+ LAY+ + R HRD+ +N+LV T VK+ DFG ++ + E + Y S+
Sbjct: 497 AYQLSTALAYLES-KRFVHRDIAARNVLVSA-TDCVKLGDFGLSRYM---EDSTYYKASK 551
Query: 121 F-----YRAPELIFGATEYTTSIDIWSAGCVLAELLL 152
+ APE I +T++ D+W G + E+L+
Sbjct: 552 GKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILM 587
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 21/139 (15%)
Query: 26 FLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKP 84
++N+ ME + S+ +++K + L Y+ Q GL Y+H+ R+ H D+K
Sbjct: 159 WVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLG----QALEGLEYLHSR-RILHGDVKA 213
Query: 85 QNLLVDPLTHQVKICDFGSA---------KQLIAGEANISYI-CSRFYRAPELIFGATEY 134
N+L+ +CDFG A K L+ G+ YI + + APE++ G +
Sbjct: 214 DNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGD----YIPGTETHMAPEVVLGRS-C 268
Query: 135 TTSIDIWSAGCVLAELLLG 153
+D+WS+ C++ +L G
Sbjct: 269 DAKVDVWSSCCMMLHMLNG 287
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 20/175 (11%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
MR DHP+++ L ++N +++ +ME R + + L + LY
Sbjct: 65 MRQFDHPHIVKL----IGVITENPVWI--IMELCTLGELRSFLQVRKFS--LDLASLILY 116
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
YQ+ LAY+ + R HRD+ +N+LV T VK+ DFG ++ + E + Y S+
Sbjct: 117 AYQLSTALAYLES-KRFVHRDIAARNVLVSA-TDCVKLGDFGLSRYM---EDSTYYKASK 171
Query: 121 F-----YRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEI 169
+ APE I +T++ D+W G + E+L+ G F G D + I
Sbjct: 172 GKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 21/139 (15%)
Query: 26 FLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKP 84
++N+ ME + S+ +++K + L Y+ Q GL Y+H+ R+ H D+K
Sbjct: 140 WVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLG----QALEGLEYLHSR-RILHGDVKA 194
Query: 85 QNLLVDPLTHQVKICDFGSA---------KQLIAGEANISYI-CSRFYRAPELIFGATEY 134
N+L+ +CDFG A K L+ G+ YI + + APE++ G +
Sbjct: 195 DNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGD----YIPGTETHMAPEVVLGRS-C 249
Query: 135 TTSIDIWSAGCVLAELLLG 153
+D+WS+ C++ +L G
Sbjct: 250 DAKVDVWSSCCMMLHMLNG 268
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 7/104 (6%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ +QI +G+ Y+ + ++ HRDL +N+LV ++KI DFG ++ + ++ +
Sbjct: 155 FAWQISQGMQYLAEM-KLVHRDLAARNILVAE-GRKMKISDFGLSRDVYEEDSYVKRSQG 212
Query: 120 RF---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPG 159
R + A E +F YTT D+WS G +L E++ LG +PG
Sbjct: 213 RIPVKWMAIESLFDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ +QI +G+ Y+ + V HRDL +N+LV ++KI DFG ++ + ++ +
Sbjct: 155 FAWQISQGMQYLAEMSLV-HRDLAARNILVAE-GRKMKISDFGLSRDVYEEDSXVKRSQG 212
Query: 120 RF---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPG 159
R + A E +F YTT D+WS G +L E++ LG +PG
Sbjct: 213 RIPVKWMAIESLFDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 80/190 (42%), Gaps = 25/190 (13%)
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVD--PLTHQVKICDFGSAKQL-IAGEAN------- 113
+ L ++H + HRDLKP+N+L + VKICDFG + + G+ +
Sbjct: 120 VASALDFLHN-KGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPEL 178
Query: 114 ISYICSRFYRAPELIFGATE----YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEI 169
++ S Y APE++ +E Y D+WS G +L LL G P F G D +
Sbjct: 179 LTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWD- 237
Query: 170 IKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC 229
+ P + + + + FP W + A DL S+LL R
Sbjct: 238 -RGEACPACQNMLFESIQEGKYEFPD---KDW-----AHISCAAKDLISKLLVRDAKQRL 288
Query: 230 TALEACAHPF 239
+A + HP+
Sbjct: 289 SAAQVLQHPW 298
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 79/190 (41%), Gaps = 25/190 (13%)
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVD--PLTHQVKICDF--GSAKQLIAGEANISY--- 116
+ L ++H + HRDLKP+N+L + VKICDF GS +L + IS
Sbjct: 120 VASALDFLHN-KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPEL 178
Query: 117 ---ICSRFYRAPELIFGATE----YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEI 169
S Y APE++ +E Y D+WS G +L LL G P F G D +
Sbjct: 179 LTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWD- 237
Query: 170 IKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC 229
+ P + + + + FP W + A DL S+LL R
Sbjct: 238 -RGEACPACQNMLFESIQEGKYEFPD---KDW-----AHISCAAKDLISKLLVRDAKQRL 288
Query: 230 TALEACAHPF 239
+A + HP+
Sbjct: 289 SAAQVLQHPW 298
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 18/172 (10%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIY----VKL 59
M HPN++ + F S L +VM+Y + N + +++ +
Sbjct: 80 MKHPNIVQYRESFEENGS-----LYIVMDYCEGG-----DLFKRINAQKGVLFQEDQILD 129
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG-EANISYIC 118
+ QI L ++H ++ HRD+K QN+ + V++ DFG A+ L + E + I
Sbjct: 130 WFVQICLALKHVHD-RKILHRDIKSQNIFLTK-DGTVQLGDFGIARVLNSTVELARACIG 187
Query: 119 SRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
+ +Y +PE I Y DIW+ GCVL EL + F + + +++II
Sbjct: 188 TPYYLSPE-ICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKII 238
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 25/160 (15%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRV---LKHYSSANQRMPLIYV 57
MR DHP+++ L ++N +++ +ME R ++ YS + L +
Sbjct: 68 MRQFDHPHIVKL----IGVITENPVWI--IMELCTLGELRSFLQVRKYS-----LDLASL 116
Query: 58 KLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYI 117
LY YQ+ LAY+ + R HRD+ +N+LV VK+ DFG ++ + E + Y
Sbjct: 117 ILYAYQLSTALAYLES-KRFVHRDIAARNVLVSS-NDCVKLGDFGLSRYM---EDSTYYK 171
Query: 118 CSRF-----YRAPELIFGATEYTTSIDIWSAGCVLAELLL 152
S+ + APE I +T++ D+W G + E+L+
Sbjct: 172 ASKGKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILM 210
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 25/160 (15%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRV---LKHYSSANQRMPLIYV 57
MR DHP+++ L ++N +++ +ME R ++ YS + L +
Sbjct: 67 MRQFDHPHIVKL----IGVITENPVWI--IMELCTLGELRSFLQVRKYS-----LDLASL 115
Query: 58 KLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYI 117
LY YQ+ LAY+ + R HRD+ +N+LV VK+ DFG ++ + E + Y
Sbjct: 116 ILYAYQLSTALAYLES-KRFVHRDIAARNVLVSS-NDCVKLGDFGLSRYM---EDSTYYK 170
Query: 118 CSRF-----YRAPELIFGATEYTTSIDIWSAGCVLAELLL 152
S+ + APE I +T++ D+W G + E+L+
Sbjct: 171 ASKGKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILM 209
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 24/184 (13%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQR-MPLIYVKL 59
M+ +DHP+++ L + ++ME P Y L HY N+ + ++ + L
Sbjct: 63 MKNLDHPHIVKLIGIIEEEPTW------IIMELYP---YGELGHYLERNKNSLKVLTLVL 113
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y+ QI + +AY+ ++ V HRD+ +N+LV VK+ DFG ++ I E +
Sbjct: 114 YSLQICKAMAYLESINCV-HRDIAVRNILVAS-PECVKLGDFGLSR-YIEDEDYYKASVT 170
Query: 120 RF---YRAPELIFGATEYTTSIDIWSAGCVLAELLL--GQPLFPGENAVDQLVEIIKVLG 174
R + +PE I +TT+ D+W + E+L QP F EN ++I VL
Sbjct: 171 RLPIKWMSPESI-NFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK-----DVIGVLE 224
Query: 175 TPTR 178
R
Sbjct: 225 KGDR 228
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 26/178 (14%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRV---LKHYSSANQRMPLIYV 57
MR DHP+++ L ++N +++ +ME R ++ YS + L +
Sbjct: 70 MRQFDHPHIVKL----IGVITENPVWI--IMELCTLGELRSFLQVRKYS-----LDLASL 118
Query: 58 KLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYI 117
LY YQ+ LAY+ + R HRD+ +N+LV VK+ DFG ++ + E + Y
Sbjct: 119 ILYAYQLSTALAYLES-KRFVHRDIAARNVLVSS-NDCVKLGDFGLSRYM---EDSTYYK 173
Query: 118 CSRF-----YRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEI 169
S+ + APE I +T++ D+W G + E+L+ G F G D + I
Sbjct: 174 ASKGKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 230
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 25/160 (15%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRV---LKHYSSANQRMPLIYV 57
MR DHP+++ L ++N +++ +ME R ++ YS + L +
Sbjct: 62 MRQFDHPHIVKL----IGVITENPVWI--IMELCTLGELRSFLQVRKYS-----LDLASL 110
Query: 58 KLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYI 117
LY YQ+ LAY+ + R HRD+ +N+LV VK+ DFG ++ + E + Y
Sbjct: 111 ILYAYQLSTALAYLES-KRFVHRDIAARNVLVSS-NDCVKLGDFGLSRYM---EDSTYYK 165
Query: 118 CSRF-----YRAPELIFGATEYTTSIDIWSAGCVLAELLL 152
S+ + APE I +T++ D+W G + E+L+
Sbjct: 166 ASKGKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILM 204
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 26/178 (14%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRV---LKHYSSANQRMPLIYV 57
MR DHP+++ L ++N +++ +ME R ++ YS + L +
Sbjct: 65 MRQFDHPHIVKL----IGVITENPVWI--IMELCTLGELRSFLQVRKYS-----LDLASL 113
Query: 58 KLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYI 117
LY YQ+ LAY+ + R HRD+ +N+LV VK+ DFG ++ + E + Y
Sbjct: 114 ILYAYQLSTALAYLES-KRFVHRDIAARNVLVSS-NDCVKLGDFGLSRYM---EDSTYYK 168
Query: 118 CSRF-----YRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEI 169
S+ + APE I +T++ D+W G + E+L+ G F G D + I
Sbjct: 169 ASKGKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 24/184 (13%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQR-MPLIYVKL 59
M+ +DHP+++ L + ++ME P Y L HY N+ + ++ + L
Sbjct: 79 MKNLDHPHIVKLIGIIEEEPTW------IIMELYP---YGELGHYLERNKNSLKVLTLVL 129
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y+ QI + +AY+ ++ V HRD+ +N+LV VK+ DFG ++ I E +
Sbjct: 130 YSLQICKAMAYLESINCV-HRDIAVRNILVAS-PECVKLGDFGLSR-YIEDEDYYKASVT 186
Query: 120 RF---YRAPELIFGATEYTTSIDIWSAGCVLAELLL--GQPLFPGENAVDQLVEIIKVLG 174
R + +PE I +TT+ D+W + E+L QP F EN ++I VL
Sbjct: 187 RLPIKWMSPESI-NFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK-----DVIGVLE 240
Query: 175 TPTR 178
R
Sbjct: 241 KGDR 244
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 26/178 (14%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRV---LKHYSSANQRMPLIYV 57
MR DHP+++ L ++N +++ +ME R ++ YS + L +
Sbjct: 93 MRQFDHPHIVKL----IGVITENPVWI--IMELCTLGELRSFLQVRKYS-----LDLASL 141
Query: 58 KLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYI 117
LY YQ+ LAY+ + R HRD+ +N+LV VK+ DFG ++ + E + Y
Sbjct: 142 ILYAYQLSTALAYLES-KRFVHRDIAARNVLVSS-NDCVKLGDFGLSRYM---EDSTYYK 196
Query: 118 CSRF-----YRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEI 169
S+ + APE I +T++ D+W G + E+L+ G F G D + I
Sbjct: 197 ASKGKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 253
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 26/178 (14%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRV---LKHYSSANQRMPLIYV 57
MR DHP+++ L ++N +++ +ME R ++ YS + L +
Sbjct: 65 MRQFDHPHIVKL----IGVITENPVWI--IMELCTLGELRSFLQVRKYS-----LDLASL 113
Query: 58 KLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYI 117
LY YQ+ LAY+ + R HRD+ +N+LV VK+ DFG ++ + E + Y
Sbjct: 114 ILYAYQLSTALAYLES-KRFVHRDIAARNVLVSS-NDCVKLGDFGLSRYM---EDSTYYK 168
Query: 118 CSRF-----YRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEI 169
S+ + APE I +T++ D+W G + E+L+ G F G D + I
Sbjct: 169 ASKGKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 24/184 (13%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQR-MPLIYVKL 59
M+ +DHP+++ L + ++ME P Y L HY N+ + ++ + L
Sbjct: 67 MKNLDHPHIVKLIGIIEEEPTW------IIMELYP---YGELGHYLERNKNSLKVLTLVL 117
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
Y+ QI + +AY+ ++ V HRD+ +N+LV VK+ DFG ++ I E +
Sbjct: 118 YSLQICKAMAYLESINCV-HRDIAVRNILVAS-PECVKLGDFGLSR-YIEDEDYYKASVT 174
Query: 120 RF---YRAPELIFGATEYTTSIDIWSAGCVLAELLL--GQPLFPGENAVDQLVEIIKVLG 174
R + +PE I +TT+ D+W + E+L QP F EN ++I VL
Sbjct: 175 RLPIKWMSPESI-NFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK-----DVIGVLE 228
Query: 175 TPTR 178
R
Sbjct: 229 KGDR 232
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +D+P+V L ++T + L+M+ +P +L + + Y+ +
Sbjct: 73 MASVDNPHVCRLLGICLTST------VQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNW 124
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI +G+ Y+ R+ HRDL +N+LV H VKI DFG AK L A E +
Sbjct: 125 CVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 121 F---YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ A E I YT D+WS G + EL+
Sbjct: 183 VPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 215
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 32/205 (15%)
Query: 45 YSSANQRMPLIYVKLYTYQIFRGLA----YIHTVPRVCHRDLKPQNLLVDPLTHQ--VKI 98
+S +R + + +I R + ++H+ + HRD+KP+NLL +K+
Sbjct: 114 FSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS-HNIAHRDVKPENLLYTSKEKDAVLKL 172
Query: 99 CDFGSAKQLIAGEANISYIC-SRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF 157
DFG AK+ + + C + +Y APE + G +Y S D+WS G ++ LL G P F
Sbjct: 173 TDFGFAKETT--QNALQTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGFPPF 229
Query: 158 PGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLA 217
+ + + IR + FP + W +V +A L
Sbjct: 230 YSNTG--------QAISPGMKRRIR-----LGQYGFPNPE---WSEV-----SEDAKQLI 268
Query: 218 SRLLQYSPSLRCTALEACAHPFFDE 242
LL+ P+ R T + HP+ ++
Sbjct: 269 RLLLKTDPTERLTITQFMNHPWINQ 293
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +D+P+V L ++T + L+M+ +P +L + + Y+ +
Sbjct: 73 MASVDNPHVCRLLGICLTST------VQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNW 124
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI +G+ Y+ R+ HRDL +N+LV H VKI DFG AK L A E +
Sbjct: 125 CVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 121 F---YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ A E I YT D+WS G + EL+
Sbjct: 183 VPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 215
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 32/205 (15%)
Query: 45 YSSANQRMPLIYVKLYTYQIFRGLA----YIHTVPRVCHRDLKPQNLLVDPLTHQ--VKI 98
+S +R + + +I R + ++H+ + HRD+KP+NLL +K+
Sbjct: 95 FSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS-HNIAHRDVKPENLLYTSKEKDAVLKL 153
Query: 99 CDFGSAKQLIAGEANISYIC-SRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF 157
DFG AK+ + + C + +Y APE + G +Y S D+WS G ++ LL G P F
Sbjct: 154 TDFGFAKETT--QNALQTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGFPPF 210
Query: 158 PGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLA 217
+ + + IR + FP + W +V +A L
Sbjct: 211 YSNTG--------QAISPGMKRRIR-----LGQYGFPNPE---WSEV-----SEDAKQLI 249
Query: 218 SRLLQYSPSLRCTALEACAHPFFDE 242
LL+ P+ R T + HP+ ++
Sbjct: 250 RLLLKTDPTERLTITQFMNHPWINQ 274
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +D+P+V L ++T + L+M+ +P +L + + Y+ +
Sbjct: 75 MASVDNPHVCRLLGICLTST------VQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNW 126
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI +G+ Y+ R+ HRDL +N+LV H VKI DFG AK L A E +
Sbjct: 127 CVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGK 184
Query: 121 F---YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ A E I YT D+WS G + EL+
Sbjct: 185 VPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 217
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +D+P+V L ++T + L+M+ +P +L + + Y+ +
Sbjct: 72 MASVDNPHVCRLLGICLTST------VQLIMQLMP--FGXLLDYVREHKDNIGSQYLLNW 123
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI +G+ Y+ R+ HRDL +N+LV H VKI DFG AK L A E +
Sbjct: 124 CVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 121 F---YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ A E I YT D+WS G + EL+
Sbjct: 182 VPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 214
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 19/157 (12%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
MR DHP+++ L ++N +++ +ME R + + L + LY
Sbjct: 445 MRQFDHPHIVKL----IGVITENPVWI--IMELCTLGELRSFLQVRKFS--LDLASLILY 496
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
YQ+ LAY+ + R HRD+ +N+LV VK+ DFG ++ + E + Y S+
Sbjct: 497 AYQLSTALAYLES-KRFVHRDIAARNVLVSS-NDCVKLGDFGLSRYM---EDSTYYKASK 551
Query: 121 F-----YRAPELIFGATEYTTSIDIWSAGCVLAELLL 152
+ APE I +T++ D+W G + E+L+
Sbjct: 552 GKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILM 587
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 18/158 (11%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL- 59
MR ++HPNV++L + L P + L + + QR P + +
Sbjct: 76 MRGLNHPNVLALIGIMLPPEGLPHVLL-------PYMCHGDLLQFIRSPQRNPTVKDLIS 128
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ Q+ RG+ Y+ + HRDL +N ++D + VK+ DFG A+ ++ E S
Sbjct: 129 FGLQVARGMEYL-AEQKFVHRDLAARNCMLDE-SFTVKVADFGLARDILDRE-YYSVQQH 185
Query: 120 RFYRAPELIFGATE------YTTSIDIWSAGCVLAELL 151
R R P + + A E +TT D+WS G +L ELL
Sbjct: 186 RHARLP-VKWTALESLQTYRFTTKSDVWSFGVLLWELL 222
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 99/228 (43%), Gaps = 29/228 (12%)
Query: 1 MRVMDHPNVISLKH-CFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ HPNV+SL C S S + +P + L+++ P + +
Sbjct: 86 MKDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVKDLI 137
Query: 60 -YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYIC 118
+ Q+ +G+ ++ + + HRDL +N ++D VK+ DFG A+ ++ E + +
Sbjct: 138 GFGLQVAKGMKFLAS-KKFVHRDLAARNCMLDE-KFTVKVADFGLARDMLDKEFDSVHNK 195
Query: 119 SRF-----YRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKV 172
+ + A E + ++TT D+WS G +L EL+ G P +P N D V ++
Sbjct: 196 TGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-- 252
Query: 173 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 220
+ R + P Y ++ WH M P +L SR+
Sbjct: 253 ------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 292
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
++ Q+ +G+A++ + HRD+ +N+L+ H KI DFG A+ ++ I +
Sbjct: 171 FSSQVAQGMAFLAS-KNCIHRDVAARNVLLTN-GHVAKIGDFGLARDIMNDSNYIVKGNA 228
Query: 120 RF---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIK 171
R + APE IF YT D+WS G +L E+ LG +PG + +++K
Sbjct: 229 RLPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 283
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 29/228 (12%)
Query: 1 MRVMDHPNVISLKH-CFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ HPNV+SL C S S + +P + L+++ P + +
Sbjct: 84 MKDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVKDLI 135
Query: 60 -YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYIC 118
+ Q+ +G+ Y+ + + HRDL +N ++D VK+ DFG A+ + E +
Sbjct: 136 GFGLQVAKGMKYLAS-KKFVHRDLAARNCMLDE-KFTVKVADFGLARDMYDKEXXSVHNK 193
Query: 119 SRF-----YRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKV 172
+ + A E + ++TT D+WS G +L EL+ G P +P N D V ++
Sbjct: 194 TGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-- 250
Query: 173 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 220
+ R + P Y ++ WH M P +L SR+
Sbjct: 251 ------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 290
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +D+P+V L ++T + L+M+ +P +L + + Y+ +
Sbjct: 71 MASVDNPHVCRLLGICLTST------VQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNW 122
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI +G+ Y+ R+ HRDL +N+LV H VKI DFG AK L A E +
Sbjct: 123 CVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 121 F---YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ A E I YT D+WS G + EL+
Sbjct: 181 VPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +D+P+V L ++T + L+M+ +P +L + + Y+ +
Sbjct: 73 MASVDNPHVCRLLGICLTST------VQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNW 124
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI +G+ Y+ R+ HRDL +N+LV H VKI DFG AK L A E +
Sbjct: 125 CVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 182
Query: 121 F---YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ A E I YT D+WS G + EL+
Sbjct: 183 VPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 215
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +D+P+V L ++T + L+M+ +P +L + + Y+ +
Sbjct: 74 MASVDNPHVCRLLGICLTST------VQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNW 125
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI +G+ Y+ R+ HRDL +N+LV H VKI DFG AK L A E +
Sbjct: 126 CVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 121 F---YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ A E I YT D+WS G + EL+
Sbjct: 184 VPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 216
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
++ Q+ +G+A++ + HRD+ +N+L+ H KI DFG A+ ++ I +
Sbjct: 157 FSSQVAQGMAFLAS-KNCIHRDVAARNVLLTN-GHVAKIGDFGLARDIMNDSNYIVKGNA 214
Query: 120 RF---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPG 159
R + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 215 RLPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 257
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +D+P+V L ++T + L+M+ +P +L + + Y+ +
Sbjct: 75 MASVDNPHVCRLLGICLTST------VQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNW 126
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI +G+ Y+ R+ HRDL +N+LV H VKI DFG AK L A E +
Sbjct: 127 CVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 184
Query: 121 F---YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ A E I YT D+WS G + EL+
Sbjct: 185 VPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 217
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
++ Q+ +G+A++ + HRD+ +N+L+ H KI DFG A+ ++ I +
Sbjct: 165 FSSQVAQGMAFLAS-KNCIHRDVAARNVLLTN-GHVAKIGDFGLARDIMNDSNYIVKGNA 222
Query: 120 RF---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPG 159
R + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 223 RLPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 265
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
++ Q+ +G+A++ + HRD+ +N+L+ H KI DFG A+ ++ I +
Sbjct: 169 FSSQVAQGMAFLAS-KNCIHRDVAARNVLLTN-GHVAKIGDFGLARDIMNDSNYIVKGNA 226
Query: 120 RF---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPG 159
R + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 227 RLPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 269
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +D+P+V L ++T + L+M+ +P +L + + Y+ +
Sbjct: 72 MASVDNPHVCRLLGICLTST------VQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNW 123
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI +G+ Y+ R+ HRDL +N+LV H VKI DFG AK L A E +
Sbjct: 124 CVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 121 F---YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ A E I YT D+WS G + EL+
Sbjct: 182 VPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 214
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
++ Q+ +G+A++ + HRD+ +N+L+ H KI DFG A+ ++ I +
Sbjct: 163 FSSQVAQGMAFLAS-KNCIHRDVAARNVLLTN-GHVAKIGDFGLARDIMNDSNYIVKGNA 220
Query: 120 RF---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPG 159
R + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 221 RLPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 263
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
++ Q+ +G+A++ + HRD+ +N+L+ H KI DFG A+ ++ I +
Sbjct: 169 FSSQVAQGMAFLAS-KNCIHRDVAARNVLLTN-GHVAKIGDFGLARDIMNDSNYIVKGNA 226
Query: 120 RF---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPG 159
R + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 227 RLPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 269
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +D+P+V L ++T + L+M+ +P +L + + Y+ +
Sbjct: 78 MASVDNPHVCRLLGICLTST------VQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNW 129
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI +G+ Y+ R+ HRDL +N+LV H VKI DFG AK L A E +
Sbjct: 130 CVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 121 F---YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ A E I YT D+WS G + EL+
Sbjct: 188 VPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 220
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 94/231 (40%), Gaps = 35/231 (15%)
Query: 1 MRVMDHPNVISLKH-CFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ HPNV+SL C S S + +P + L+++ P + +
Sbjct: 77 MKDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVKDLI 128
Query: 60 -YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYIC 118
+ Q+ +G+ Y+ + + HRDL +N ++D VK+ DFG A+ + E Y
Sbjct: 129 GFGLQVAKGMKYLAS-KKFVHRDLAARNCMLDE-KFTVKVADFGLARDMYDKE----YYS 182
Query: 119 SRFYRAPEL--------IFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEI 169
+L ++TT D+WS G +L EL+ G P +P N D V +
Sbjct: 183 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 242
Query: 170 IKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 220
+ + R + P Y ++ WH M P +L SR+
Sbjct: 243 L--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 283
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 9/114 (7%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLV-DPLTHQVKICDFGSA--KQLIAGEANISYIC- 118
Q +G+ Y+H + HRDLK N+ + + LT VKI DFG A K +G +
Sbjct: 132 QTAQGMDYLH-AKSIIHRDLKSNNIFLHEDLT--VKIGDFGLATEKSRWSGSHQFEQLSG 188
Query: 119 SRFYRAPELIFGATE--YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
S + APE+I + Y+ D+++ G VL EL+ GQ + N DQ++ ++
Sbjct: 189 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 242
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 94/231 (40%), Gaps = 35/231 (15%)
Query: 1 MRVMDHPNVISLKH-CFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ HPNV+SL C S S + +P + L+++ P + +
Sbjct: 103 MKDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVKDLI 154
Query: 60 -YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYIC 118
+ Q+ +G+ Y+ + + HRDL +N ++D VK+ DFG A+ + E Y
Sbjct: 155 GFGLQVAKGMKYLAS-KKFVHRDLAARNCMLDE-KFTVKVADFGLARDMYDKE----YYS 208
Query: 119 SRFYRAPEL--------IFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEI 169
+L ++TT D+WS G +L EL+ G P +P N D V +
Sbjct: 209 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 268
Query: 170 IKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 220
+ + R + P Y ++ WH M P +L SR+
Sbjct: 269 L--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 309
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 9/114 (7%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLV-DPLTHQVKICDFGSA--KQLIAGEANISYIC- 118
Q +G+ Y+H + HRDLK N+ + + LT VKI DFG A K +G +
Sbjct: 139 QTAQGMDYLH-AKSIIHRDLKSNNIFLHEDLT--VKIGDFGLATVKSRWSGSHQFEQLSG 195
Query: 119 SRFYRAPELIFGATE--YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
S + APE+I + Y+ D+++ G VL EL+ GQ + N DQ++ ++
Sbjct: 196 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 249
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 9/114 (7%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLV-DPLTHQVKICDFGSA--KQLIAGEANISYIC- 118
Q +G+ Y+H + HRDLK N+ + + LT VKI DFG A K +G +
Sbjct: 140 QTAQGMDYLH-AKSIIHRDLKSNNIFLHEDLT--VKIGDFGLATEKSRWSGSHQFEQLSG 196
Query: 119 SRFYRAPELIFGATE--YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
S + APE+I + Y+ D+++ G VL EL+ GQ + N DQ++ ++
Sbjct: 197 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 250
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 94/231 (40%), Gaps = 35/231 (15%)
Query: 1 MRVMDHPNVISLKH-CFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ HPNV+SL C S S + +P + L+++ P + +
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVKDLI 136
Query: 60 -YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYIC 118
+ Q+ +G+ Y+ + + HRDL +N ++D VK+ DFG A+ + E Y
Sbjct: 137 GFGLQVAKGMKYLAS-KKFVHRDLAARNCMLDE-KFTVKVADFGLARDMYDKE----YYS 190
Query: 119 SRFYRAPEL--------IFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEI 169
+L ++TT D+WS G +L EL+ G P +P N D V +
Sbjct: 191 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 250
Query: 170 IKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 220
+ + R + P Y ++ WH M P +L SR+
Sbjct: 251 L--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 291
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 94/231 (40%), Gaps = 35/231 (15%)
Query: 1 MRVMDHPNVISLKH-CFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ HPNV+SL C S S + +P + L+++ P + +
Sbjct: 83 MKDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVKDLI 134
Query: 60 -YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYIC 118
+ Q+ +G+ Y+ + + HRDL +N ++D VK+ DFG A+ + E Y
Sbjct: 135 GFGLQVAKGMKYLAS-KKFVHRDLAARNCMLDE-KFTVKVADFGLARDMYDKE----YYS 188
Query: 119 SRFYRAPEL--------IFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEI 169
+L ++TT D+WS G +L EL+ G P +P N D V +
Sbjct: 189 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 248
Query: 170 IKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 220
+ + R + P Y ++ WH M P +L SR+
Sbjct: 249 L--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 289
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 9/114 (7%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLV-DPLTHQVKICDFGSA--KQLIAGEANISYIC- 118
Q +G+ Y+H + HRDLK N+ + + LT VKI DFG A K +G +
Sbjct: 140 QTAQGMDYLH-AKSIIHRDLKSNNIFLHEDLT--VKIGDFGLATVKSRWSGSHQFEQLSG 196
Query: 119 SRFYRAPELIFGATE--YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
S + APE+I + Y+ D+++ G VL EL+ GQ + N DQ++ ++
Sbjct: 197 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 250
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 94/231 (40%), Gaps = 35/231 (15%)
Query: 1 MRVMDHPNVISLKH-CFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ HPNV+SL C S S + +P + L+++ P + +
Sbjct: 82 MKDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVKDLI 133
Query: 60 -YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYIC 118
+ Q+ +G+ Y+ + + HRDL +N ++D VK+ DFG A+ + E Y
Sbjct: 134 GFGLQVAKGMKYLAS-KKFVHRDLAARNCMLDE-KFTVKVADFGLARDMYDKE----YYS 187
Query: 119 SRFYRAPEL--------IFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEI 169
+L ++TT D+WS G +L EL+ G P +P N D V +
Sbjct: 188 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 247
Query: 170 IKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 220
+ + R + P Y ++ WH M P +L SR+
Sbjct: 248 L--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 288
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 94/231 (40%), Gaps = 35/231 (15%)
Query: 1 MRVMDHPNVISLKH-CFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ HPNV+SL C S S + +P + L+++ P + +
Sbjct: 104 MKDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVKDLI 155
Query: 60 -YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYIC 118
+ Q+ +G+ Y+ + + HRDL +N ++D VK+ DFG A+ + E Y
Sbjct: 156 GFGLQVAKGMKYLAS-KKFVHRDLAARNCMLDE-KFTVKVADFGLARDMYDKE----YYS 209
Query: 119 SRFYRAPEL--------IFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEI 169
+L ++TT D+WS G +L EL+ G P +P N D V +
Sbjct: 210 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 269
Query: 170 IKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 220
+ + R + P Y ++ WH M P +L SR+
Sbjct: 270 L--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 310
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 94/231 (40%), Gaps = 35/231 (15%)
Query: 1 MRVMDHPNVISLKH-CFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ HPNV+SL C S S + +P + L+++ P + +
Sbjct: 84 MKDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVKDLI 135
Query: 60 -YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYIC 118
+ Q+ +G+ Y+ + + HRDL +N ++D VK+ DFG A+ + E Y
Sbjct: 136 GFGLQVAKGMKYLAS-KKFVHRDLAARNCMLDE-KFTVKVADFGLARDMYDKE----YYS 189
Query: 119 SRFYRAPEL--------IFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEI 169
+L ++TT D+WS G +L EL+ G P +P N D V +
Sbjct: 190 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 249
Query: 170 IKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 220
+ + R + P Y ++ WH M P +L SR+
Sbjct: 250 L--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 290
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 94/231 (40%), Gaps = 35/231 (15%)
Query: 1 MRVMDHPNVISLKH-CFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ HPNV+SL C S S + +P + L+++ P + +
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVKDLI 136
Query: 60 -YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYIC 118
+ Q+ +G+ Y+ + + HRDL +N ++D VK+ DFG A+ + E Y
Sbjct: 137 GFGLQVAKGMKYLAS-KKFVHRDLAARNCMLDE-KFTVKVADFGLARDMYDKE----YYS 190
Query: 119 SRFYRAPEL--------IFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEI 169
+L ++TT D+WS G +L EL+ G P +P N D V +
Sbjct: 191 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 250
Query: 170 IKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 220
+ + R + P Y ++ WH M P +L SR+
Sbjct: 251 L--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 291
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 9/114 (7%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLV-DPLTHQVKICDFGSA--KQLIAGEANISYIC- 118
Q +G+ Y+H + HRDLK N+ + + LT VKI DFG A K +G +
Sbjct: 114 QTAQGMDYLHA-KSIIHRDLKSNNIFLHEDLT--VKIGDFGLATVKSRWSGSHQFEQLSG 170
Query: 119 SRFYRAPELIFGATE--YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
S + APE+I + Y+ D+++ G VL EL+ GQ + N DQ++ ++
Sbjct: 171 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 224
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 9/114 (7%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLV-DPLTHQVKICDFGSA--KQLIAGEANISYIC- 118
Q +G+ Y+H + HRDLK N+ + + LT VKI DFG A K +G +
Sbjct: 112 QTAQGMDYLHA-KSIIHRDLKSNNIFLHEDLT--VKIGDFGLATEKSRWSGSHQFEQLSG 168
Query: 119 SRFYRAPELIFGATE--YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
S + APE+I + Y+ D+++ G VL EL+ GQ + N DQ++ ++
Sbjct: 169 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 9/114 (7%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLV-DPLTHQVKICDFGSA--KQLIAGEANISYIC- 118
Q +G+ Y+H + HRDLK N+ + + LT VKI DFG A K +G +
Sbjct: 117 QTAQGMDYLHA-KSIIHRDLKSNNIFLHEDLT--VKIGDFGLATVKSRWSGSHQFEQLSG 173
Query: 119 SRFYRAPELIFGATE--YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
S + APE+I + Y+ D+++ G VL EL+ GQ + N DQ++ ++
Sbjct: 174 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 227
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 94/231 (40%), Gaps = 35/231 (15%)
Query: 1 MRVMDHPNVISLKH-CFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ HPNV+SL C S S + +P + L+++ P + +
Sbjct: 80 MKDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVKDLI 131
Query: 60 -YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYIC 118
+ Q+ +G+ Y+ + + HRDL +N ++D VK+ DFG A+ + E Y
Sbjct: 132 GFGLQVAKGMKYLAS-KKFVHRDLAARNCMLDE-KFTVKVADFGLARDMYDKE----YYS 185
Query: 119 SRFYRAPEL--------IFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEI 169
+L ++TT D+WS G +L EL+ G P +P N D V +
Sbjct: 186 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 245
Query: 170 IKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 220
+ + R + P Y ++ WH M P +L SR+
Sbjct: 246 L--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 286
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 9/114 (7%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLV-DPLTHQVKICDFGSA--KQLIAGEANISYIC- 118
Q +G+ Y+H + HRDLK N+ + + LT VKI DFG A K +G +
Sbjct: 117 QTAQGMDYLHA-KSIIHRDLKSNNIFLHEDLT--VKIGDFGLATVKSRWSGSHQFEQLSG 173
Query: 119 SRFYRAPELIFGATE--YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
S + APE+I + Y+ D+++ G VL EL+ GQ + N DQ++ ++
Sbjct: 174 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 227
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 9/114 (7%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLV-DPLTHQVKICDFGSA--KQLIAGEANISYIC- 118
Q +G+ Y+H + HRDLK N+ + + LT VKI DFG A K +G +
Sbjct: 112 QTAQGMDYLHA-KSIIHRDLKSNNIFLHEDLT--VKIGDFGLATVKSRWSGSHQFEQLSG 168
Query: 119 SRFYRAPELIFGATE--YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
S + APE+I + Y+ D+++ G VL EL+ GQ + N DQ++ ++
Sbjct: 169 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 9/114 (7%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLV-DPLTHQVKICDFGSA--KQLIAGEANISYIC- 118
Q +G+ Y+H + HRDLK N+ + + LT VKI DFG A K +G +
Sbjct: 112 QTAQGMDYLHA-KSIIHRDLKSNNIFLHEDLT--VKIGDFGLATVKSRWSGSHQFEQLSG 168
Query: 119 SRFYRAPELIFGATE--YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
S + APE+I + Y+ D+++ G VL EL+ GQ + N DQ++ ++
Sbjct: 169 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 29/228 (12%)
Query: 1 MRVMDHPNVISLKH-CFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ HPNV+SL C S S + +P + L+++ P + +
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVKDLI 136
Query: 60 -YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYIC 118
+ Q+ +G+ ++ + + HRDL +N ++D VK+ DFG A+ + E + +
Sbjct: 137 GFGLQVAKGMKFLAS-KKFVHRDLAARNCMLDE-KFTVKVADFGLARDMYDKEFDSVHNK 194
Query: 119 SRF-----YRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKV 172
+ + A E + ++TT D+WS G +L EL+ G P +P N D V ++
Sbjct: 195 TGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-- 251
Query: 173 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 220
+ R + P Y ++ WH M P +L SR+
Sbjct: 252 ------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 291
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 29/228 (12%)
Query: 1 MRVMDHPNVISLKH-CFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ HPNV+SL C S S + +P + L+++ P + +
Sbjct: 144 MKDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVKDLI 195
Query: 60 -YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYIC 118
+ Q+ +G+ ++ + + HRDL +N ++D VK+ DFG A+ + E + +
Sbjct: 196 GFGLQVAKGMKFLAS-KKFVHRDLAARNCMLDE-KFTVKVADFGLARDMYDKEFDSVHNK 253
Query: 119 SRF-----YRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKV 172
+ + A E + ++TT D+WS G +L EL+ G P +P N D V ++
Sbjct: 254 TGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-- 310
Query: 173 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 220
+ R + P Y ++ WH M P +L SR+
Sbjct: 311 ------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 350
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 29/228 (12%)
Query: 1 MRVMDHPNVISLKH-CFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ HPNV+SL C S S + +P + L+++ P + +
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVKDLI 136
Query: 60 -YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYIC 118
+ Q+ +G+ ++ + + HRDL +N ++D VK+ DFG A+ + E + +
Sbjct: 137 GFGLQVAKGMKFLAS-KKFVHRDLAARNCMLDE-KFTVKVADFGLARDMYDKEFDSVHNK 194
Query: 119 SRF-----YRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKV 172
+ + A E + ++TT D+WS G +L EL+ G P +P N D V ++
Sbjct: 195 TGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-- 251
Query: 173 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 220
+ R + P Y ++ WH M P +L SR+
Sbjct: 252 ------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 291
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 29/228 (12%)
Query: 1 MRVMDHPNVISLKH-CFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ HPNV+SL C S S + +P + L+++ P + +
Sbjct: 83 MKDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVKDLI 134
Query: 60 -YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYIC 118
+ Q+ +G+ ++ + + HRDL +N ++D VK+ DFG A+ + E + +
Sbjct: 135 GFGLQVAKGMKFLAS-KKFVHRDLAARNCMLDE-KFTVKVADFGLARDMYDKEFDSVHNK 192
Query: 119 SRF-----YRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKV 172
+ + A E + ++TT D+WS G +L EL+ G P +P N D V ++
Sbjct: 193 TGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-- 249
Query: 173 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 220
+ R + P Y ++ WH M P +L SR+
Sbjct: 250 ------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 289
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 29/228 (12%)
Query: 1 MRVMDHPNVISLKH-CFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ HPNV+SL C S S + +P + L+++ P + +
Sbjct: 86 MKDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVKDLI 137
Query: 60 -YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYIC 118
+ Q+ +G+ ++ + + HRDL +N ++D VK+ DFG A+ + E + +
Sbjct: 138 GFGLQVAKGMKFLAS-KKFVHRDLAARNCMLDE-KFTVKVADFGLARDMYDKEFDSVHNK 195
Query: 119 SRF-----YRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKV 172
+ + A E + ++TT D+WS G +L EL+ G P +P N D V ++
Sbjct: 196 TGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-- 252
Query: 173 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 220
+ R + P Y ++ WH M P +L SR+
Sbjct: 253 ------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 292
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 83/173 (47%), Gaps = 17/173 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKL 59
++ ++H N++ L TT+++++ L+ME+ P S+Y VL+ S+A +P +
Sbjct: 61 LKKLNHKNIVKLFAIEEETTTRHKV---LIMEFCPCGSLYTVLEEPSNA-YGLPESEFLI 116
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLL--VDPLTHQV-KICDFGSAKQLIAGEANISY 116
+ G+ ++ + HR++KP N++ + V K+ DFG+A++L E +S
Sbjct: 117 VLRDVVGGMNHLRE-NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSL 175
Query: 117 ICSRFYRAPELIFGAT-------EYTTSIDIWSAGCVLAELLLGQ-PLFPGEN 161
+ Y P++ A +Y ++D+WS G G P P E
Sbjct: 176 YGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEG 228
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 29/228 (12%)
Query: 1 MRVMDHPNVISLKH-CFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKL 59
M+ HPNV+SL C S S + +P + L+++ P + +
Sbjct: 90 MKDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVKDLI 141
Query: 60 -YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYIC 118
+ Q+ +G+ ++ + + HRDL +N ++D VK+ DFG A+ + E + +
Sbjct: 142 GFGLQVAKGMKFLAS-KKFVHRDLAARNCMLDE-KFTVKVADFGLARDMYDKEFDSVHNK 199
Query: 119 SRF-----YRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKV 172
+ + A E + ++TT D+WS G +L EL+ G P +P N D V ++
Sbjct: 200 TGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-- 256
Query: 173 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 220
+ R + P Y ++ WH M P +L SR+
Sbjct: 257 ------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 296
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +D+P+V L ++T + L+ + +P +L + + Y+ +
Sbjct: 73 MASVDNPHVCRLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNW 124
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI +G+ Y+ R+ HRDL +N+LV H VKI DFG AK L A E +
Sbjct: 125 CVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 121 F---YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ A E I YT D+WS G + EL+
Sbjct: 183 VPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 215
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 84/177 (47%), Gaps = 19/177 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKL 59
+R H N++ F +K+ L +V ++ S+Y+ L + Q LI +
Sbjct: 86 LRKTRHVNIL----LFMGYMTKDNL--AIVTQWCEGSSLYKHLHVQETKFQMFQLIDIAR 139
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLV-DPLTHQVKICDFG--SAKQLIAGEANISY 116
T Q G+ Y+H + HRD+K N+ + + LT VKI DFG + K +G +
Sbjct: 140 QTAQ---GMDYLHA-KNIIHRDMKSNNIFLHEGLT--VKIGDFGLATVKSRWSGSQQVEQ 193
Query: 117 -ICSRFYRAPELIFGATE--YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 170
S + APE+I ++ D++S G VL EL+ G+ + N DQ++ ++
Sbjct: 194 PTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMV 250
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +D+P+V L ++T + L+ + +P +L + + Y+ +
Sbjct: 71 MASVDNPHVCRLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNW 122
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI +G+ Y+ R+ HRDL +N+LV H VKI DFG AK L A E +
Sbjct: 123 CVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGK 180
Query: 121 F---YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ A E I YT D+WS G + EL+
Sbjct: 181 VPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 19/102 (18%)
Query: 66 RGLAYIHT---------VPRVCHRDLKPQN-LLVDPLTHQVKICDFGSAKQLIAGEA--- 112
RGLAY+H P + HRD+K +N LL + LT I DFG A + AG++
Sbjct: 132 RGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLT--ACIADFGLALKFEAGKSAGD 189
Query: 113 NISYICSRFYRAPELIFGATEYTTS----IDIWSAGCVLAEL 150
+ +R Y APE++ GA + ID+++ G VL EL
Sbjct: 190 THGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 20/175 (11%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
MR DHP+++ L ++N +++ +ME R + + L + LY
Sbjct: 65 MRQFDHPHIVKL----IGVITENPVWI--IMELCTLGELRSFLQVRKFS--LDLASLILY 116
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
YQ+ LAY+ + R HRD+ +N+LV VK+ DFG ++ + E + S+
Sbjct: 117 AYQLSTALAYLES-KRFVHRDIAARNVLVSS-NDCVKLGDFGLSRYM---EDSTXXKASK 171
Query: 121 F-----YRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEI 169
+ APE I +T++ D+W G + E+L+ G F G D + I
Sbjct: 172 GKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +D+P+V L ++T + L+ + +P +L + + Y+ +
Sbjct: 78 MASVDNPHVCRLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNW 129
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI +G+ Y+ R+ HRDL +N+LV H VKI DFG AK L A E +
Sbjct: 130 CVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGK 187
Query: 121 F---YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ A E I YT D+WS G + EL+
Sbjct: 188 VPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 220
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +D+P+V L ++T + L+ + +P +L + + Y+ +
Sbjct: 71 MASVDNPHVCRLLGICLTST------VQLITQLMP--FGXLLDYVREHKDNIGSQYLLNW 122
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI +G+ Y+ R+ HRDL +N+LV H VKI DFG AK L A E +
Sbjct: 123 CVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 121 F---YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ A E I YT D+WS G + EL+
Sbjct: 181 VPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 29/169 (17%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVP--ESMYRVLKHYSSANQRMPLIY-V 57
M ++HPN++ L + +VME+VP + +R+L ++ P+ + V
Sbjct: 77 MSNLNHPNIVKLYGLMHNPP-------RMVMEFVPCGDLYHRLL------DKAHPIKWSV 123
Query: 58 KL-YTYQIFRGLAYIHTV-PRVCHRDLKPQNLLVDPLTHQVKIC----DFGSAKQLIAGE 111
KL I G+ Y+ P + HRDL+ N+ + L +C DFG+++Q +
Sbjct: 124 KLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSV--- 180
Query: 112 ANISYICSRF-YRAPELIFGATE--YTTSIDIWSAGCVLAELLLGQPLF 157
++S + F + APE I GA E YT D +S +L +L G+ F
Sbjct: 181 HSVSGLLGNFQWMAPETI-GAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ QI +G++Y+ V R+ HRDL +N+LV H VKI DFG A+ L E
Sbjct: 124 WCMQIAKGMSYLEDV-RLVHRDLAARNVLVKSPNH-VKITDFGLARLLDIDETEYHADGG 181
Query: 120 RF---YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ + A E I +T D+WS G + EL+
Sbjct: 182 KVPIKWMALESIL-RRRFTHQSDVWSYGVTVWELM 215
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 78/158 (49%), Gaps = 16/158 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKL 59
++ ++H N++ L TT+++++ L+ME+ P S+Y VL+ S+A +P +
Sbjct: 61 LKKLNHKNIVKLFAIEEETTTRHKV---LIMEFCPCGSLYTVLEEPSNA-YGLPESEFLI 116
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLL--VDPLTHQV-KICDFGSAKQLIAGEANISY 116
+ G+ ++ + HR++KP N++ + V K+ DFG+A++L E +
Sbjct: 117 VLRDVVGGMNHLRE-NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXL 175
Query: 117 ICSRFYRAPELIFGAT-------EYTTSIDIWSAGCVL 147
+ Y P++ A +Y ++D+WS G
Sbjct: 176 YGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTF 213
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +D+P+V L ++T + L+ + +P +L + + Y+ +
Sbjct: 105 MASVDNPHVCRLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNW 156
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI +G+ Y+ R+ HRDL +N+LV H VKI DFG AK L A E +
Sbjct: 157 CVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 214
Query: 121 F---YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ A E I YT D+WS G + EL+
Sbjct: 215 VPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 247
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +D+P+V L ++T + L+ + +P +L + + Y+ +
Sbjct: 74 MASVDNPHVCRLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNW 125
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI +G+ Y+ R+ HRDL +N+LV H VKI DFG AK L A E +
Sbjct: 126 CVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 121 F---YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ A E I YT D+WS G + EL+
Sbjct: 184 VPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 216
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +D+P+V L ++T + L+ + +P +L + + Y+ +
Sbjct: 81 MASVDNPHVCRLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNW 132
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI +G+ Y+ R+ HRDL +N+LV H VKI DFG AK L A E +
Sbjct: 133 CVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 190
Query: 121 F---YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ A E I YT D+WS G + EL+
Sbjct: 191 VPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 223
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +D+P+V L ++T + L+ + +P +L + + Y+ +
Sbjct: 74 MASVDNPHVCRLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNW 125
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI +G+ Y+ R+ HRDL +N+LV H VKI DFG AK L A E +
Sbjct: 126 CVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 121 F---YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ A E I YT D+WS G + EL+
Sbjct: 184 VPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 216
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +D+P+V L ++T + L+ + +P +L + + Y+ +
Sbjct: 96 MASVDNPHVCRLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNW 147
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI +G+ Y+ R+ HRDL +N+LV H VKI DFG AK L A E +
Sbjct: 148 CVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 205
Query: 121 F---YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ A E I YT D+WS G + EL+
Sbjct: 206 VPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 238
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +D+P+V L ++T + L+ + +P +L + + Y+ +
Sbjct: 74 MASVDNPHVCRLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNW 125
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI +G+ Y+ R+ HRDL +N+LV H VKI DFG AK L A E +
Sbjct: 126 CVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 121 F---YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ A E I YT D+WS G + EL+
Sbjct: 184 VPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 216
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +D+P+V L ++T + L+ + +P +L + + Y+ +
Sbjct: 73 MASVDNPHVCRLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNW 124
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI +G+ Y+ R+ HRDL +N+LV H VKI DFG AK L A E +
Sbjct: 125 CVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 182
Query: 121 F---YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ A E I YT D+WS G + EL+
Sbjct: 183 VPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 215
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +D+P+V L ++T + L+ + +P +L + + Y+ +
Sbjct: 77 MASVDNPHVCRLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNW 128
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI +G+ Y+ R+ HRDL +N+LV H VKI DFG AK L A E +
Sbjct: 129 CVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 186
Query: 121 F---YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ A E I YT D+WS G + EL+
Sbjct: 187 VPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 219
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +D+P+V L ++T + L+ + +P +L + + Y+ +
Sbjct: 71 MASVDNPHVCRLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNW 122
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI +G+ Y+ R+ HRDL +N+LV H VKI DFG AK L A E +
Sbjct: 123 CVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 121 F---YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ A E I YT D+WS G + EL+
Sbjct: 181 VPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +D+P+V L ++T + L+ + +P +L + + Y+ +
Sbjct: 71 MASVDNPHVCRLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNW 122
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI +G+ Y+ R+ HRDL +N+LV H VKI DFG AK L A E +
Sbjct: 123 CVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 121 F---YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ A E I YT D+WS G + EL+
Sbjct: 181 VPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +D+P+V L ++T + L+ + +P +L + + Y+ +
Sbjct: 78 MASVDNPHVCRLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNW 129
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI +G+ Y+ R+ HRDL +N+LV H VKI DFG AK L A E +
Sbjct: 130 CVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 121 F---YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ A E I YT D+WS G + EL+
Sbjct: 188 VPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 220
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +D+P+V L ++T + L+ + +P +L + + Y+ +
Sbjct: 78 MASVDNPHVCRLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNW 129
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI +G+ Y+ R+ HRDL +N+LV H VKI DFG AK L A E +
Sbjct: 130 CVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 121 F---YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ A E I YT D+WS G + EL+
Sbjct: 188 VPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 220
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +D+P+V L ++T + L+ + +P +L + + Y+ +
Sbjct: 71 MASVDNPHVCRLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNW 122
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI +G+ Y+ R+ HRDL +N+LV H VKI DFG AK L A E +
Sbjct: 123 CVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 121 F---YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ A E I YT D+WS G + EL+
Sbjct: 181 VPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +D+P+V L ++T + L+ + +P +L + + Y+ +
Sbjct: 65 MASVDNPHVCRLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNW 116
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI +G+ Y+ R+ HRDL +N+LV H VKI DFG AK L A E +
Sbjct: 117 CVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 174
Query: 121 F---YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ A E I YT D+WS G + EL+
Sbjct: 175 VPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 207
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 66 RGLAYIHT--VPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYIC--SRF 121
RGLAY+H P++ HRD+K N+L+D V + DFG AK + + ++ +
Sbjct: 150 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDXHVXXAVRGTIG 208
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF 157
+ APE + + + D++ G +L EL+ GQ F
Sbjct: 209 HIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 243
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Query: 66 RGLAYIHT--VPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF-- 121
RGLAY+H P++ HRD+K N+L+D V + DFG AK + + ++
Sbjct: 142 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDXHVXXAVRGXIG 200
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF 157
+ APE + + + D++ G +L EL+ GQ F
Sbjct: 201 HIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 235
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIF 65
HP VI L F E F+ ++ +P + L Y + + + + Q+
Sbjct: 97 HPGVIRLLDWF----ETQEGFMLVLERPLPA---QDLFDYITEKGPLGEGPSRCFFGQVV 149
Query: 66 RGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAP 125
+ + H+ V HRD+K +N+L+D K+ DFGS L+ E + +R Y P
Sbjct: 150 AAIQHCHSR-GVVHRDIKDENILIDLRRGCAKLIDFGSGA-LLHDEPYTDFDGTRVYSPP 207
Query: 126 ELIFGATEYTTSIDIWSAGCVLAELLLGQ 154
E I + +WS G +L +++ G
Sbjct: 208 EWISRHQYHALPATVWSLGILLYDMVCGD 236
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 77/154 (50%), Gaps = 14/154 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M + HP ++ F+ SK E + +V EY+ +L + S + + +
Sbjct: 57 MMKLSHPKLVK----FYGVCSK-EYPIYIVTEYISNGC--LLNYLRSHGKGLEPSQLLEM 109
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
Y + G+A++ + + HRDL +N LVD VK+ DFG + ++ + +S + ++
Sbjct: 110 CYDVCEGMAFLES-HQFIHRDLAARNCLVDR-DLCVKVSDFGMTRYVL-DDQYVSSVGTK 166
Query: 121 F---YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
F + APE +F +Y++ D+W+ G ++ E+
Sbjct: 167 FPVKWSAPE-VFHYFKYSSKSDVWAFGILMWEVF 199
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 69/154 (44%), Gaps = 14/154 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +D+P+V L ++T + L+ + +P +L + + Y+ +
Sbjct: 68 MASVDNPHVCRLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNW 119
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
QI G+ Y+ R+ HRDL +N+LV H VKI DFG AK L A E +
Sbjct: 120 CVQIAEGMNYLED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 177
Query: 121 F---YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ A E I YT D+WS G + EL+
Sbjct: 178 VPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 210
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 29/169 (17%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVP--ESMYRVLKHYSSANQRMPLIY-V 57
M ++HPN++ L + +VME+VP + +R+L ++ P+ + V
Sbjct: 77 MSNLNHPNIVKLYGLMHNPP-------RMVMEFVPCGDLYHRLL------DKAHPIKWSV 123
Query: 58 KL-YTYQIFRGLAYIHTV-PRVCHRDLKPQNLLVDPLTHQVKIC----DFGSAKQLIAGE 111
KL I G+ Y+ P + HRDL+ N+ + L +C DFG ++Q +
Sbjct: 124 KLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSV--- 180
Query: 112 ANISYICSRF-YRAPELIFGATE--YTTSIDIWSAGCVLAELLLGQPLF 157
++S + F + APE I GA E YT D +S +L +L G+ F
Sbjct: 181 HSVSGLLGNFQWMAPETI-GAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 78/157 (49%), Gaps = 18/157 (11%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKL 59
M DHPN+I L+ ++ L + +V EY+ S+ L+ + M L+ +
Sbjct: 104 MGQFDHPNIIRLE----GVVTRGRLAM-IVTEYMENGSLDTFLRTHDGQFTIMQLVGM-- 156
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
+ G+ Y+ + V HRDL +N+LVD K+ DFG ++ ++ + + +Y +
Sbjct: 157 -LRGVGAGMRYLSDLGYV-HRDLAARNVLVDS-NLVCKVSDFGLSR-VLEDDPDAAYTTT 212
Query: 120 RF-----YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ APE I T ++++ D+WS G V+ E+L
Sbjct: 213 GGKIPIRWTAPEAIAFRT-FSSASDVWSFGVVMWEVL 248
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 49/204 (24%)
Query: 68 LAYIHTVPR--VCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANI---SYICSRFY 122
L +HT+ + + H DLKP N L+ + +K+ DFG A Q+ ++ S + + Y
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 194
Query: 123 RAPELIFGATE----------YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV 172
PE I + + D+WS GC+L + G+ P + ++Q+ ++ +
Sbjct: 195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAI 252
Query: 173 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL---LQYSPSLRC 229
+ +PN+ + FP I PE DL L L+ P R
Sbjct: 253 I-----------DPNH-EIEFPDI--------------PEK-DLQDVLKCCLKRDPKQRI 285
Query: 230 TALEACAHPFFDELREPNARLPNG 253
+ E AHP+ P ++ G
Sbjct: 286 SIPELLAHPYVQIQTHPVNQMAKG 309
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 49/204 (24%)
Query: 68 LAYIHTVPR--VCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANI---SYICSRFY 122
L +HT+ + + H DLKP N L+ + +K+ DFG A Q+ ++ S + + Y
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 175
Query: 123 RAPELIFGATE----------YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV 172
PE I + + D+WS GC+L + G+ P + ++Q+ ++ +
Sbjct: 176 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAI 233
Query: 173 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL---LQYSPSLRC 229
+ +PN+ + FP I PE DL L L+ P R
Sbjct: 234 I-----------DPNH-EIEFPDI--------------PEK-DLQDVLKCCLKRDPKQRI 266
Query: 230 TALEACAHPFFDELREPNARLPNG 253
+ E AHP+ P ++ G
Sbjct: 267 SIPELLAHPYVQIQTHPVNQMAKG 290
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 49/204 (24%)
Query: 68 LAYIHTVPR--VCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANI---SYICSRFY 122
L +HT+ + + H DLKP N L+ + +K+ DFG A Q+ ++ S + + Y
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 178
Query: 123 RAPELIFGATE----------YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV 172
PE I + + D+WS GC+L + G+ P + ++Q+ ++ +
Sbjct: 179 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAI 236
Query: 173 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL---LQYSPSLRC 229
+ +PN+ + FP I PE DL L L+ P R
Sbjct: 237 I-----------DPNH-EIEFPDI--------------PEK-DLQDVLKCCLKRDPKQRI 269
Query: 230 TALEACAHPFFDELREPNARLPNG 253
+ E AHP+ P ++ G
Sbjct: 270 SIPELLAHPYVQIQTHPVNQMAKG 293
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 16/102 (15%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEA---------- 112
QI + ++H+ + HRDLKP N+ + VK+ DFG + E
Sbjct: 126 QIAEAVEFLHS-KGLMHRDLKPSNIFF-TMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 113 ---NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ + ++ Y +PE I G + Y+ +DI+S G +L ELL
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNS-YSHKVDIFSLGLILFELL 224
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE----------- 111
QI + ++H+ + HRDLKP N+ + VK+ DFG + E
Sbjct: 172 QIAEAVEFLHS-KGLMHRDLKPSNIFF-TMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 229
Query: 112 --ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ + ++ Y +PE I G Y+ +DI+S G +L ELL
Sbjct: 230 YATHXGQVGTKLYMSPEQIHG-NNYSHKVDIFSLGLILFELL 270
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 49/204 (24%)
Query: 68 LAYIHTVPR--VCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANI---SYICSRFY 122
L +HT+ + + H DLKP N L+ + +K+ DFG A Q+ ++ S + + Y
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 174
Query: 123 RAPELIFGATE----------YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV 172
PE I + + D+WS GC+L + G+ P + ++Q+ ++ +
Sbjct: 175 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAI 232
Query: 173 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL---LQYSPSLRC 229
+ +PN+ + FP I PE DL L L+ P R
Sbjct: 233 I-----------DPNH-EIEFPDI--------------PEK-DLQDVLKCCLKRDPKQRI 265
Query: 230 TALEACAHPFFDELREPNARLPNG 253
+ E AHP+ P ++ G
Sbjct: 266 SIPELLAHPYVQIQTHPVNQMAKG 289
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 49/204 (24%)
Query: 68 LAYIHTVPR--VCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANI---SYICSRFY 122
L +HT+ + + H DLKP N L+ + +K+ DFG A Q+ ++ S + + Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 222
Query: 123 RAPELIFGATE----------YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV 172
PE I + + D+WS GC+L + G+ P + ++Q+ ++ +
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAI 280
Query: 173 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL---LQYSPSLRC 229
+ +PN+ + FP I PE DL L L+ P R
Sbjct: 281 I-----------DPNH-EIEFPDI--------------PEK-DLQDVLKCCLKRDPKQRI 313
Query: 230 TALEACAHPFFDELREPNARLPNG 253
+ E AHP+ P ++ G
Sbjct: 314 SIPELLAHPYVQIQTHPVNQMAKG 337
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 67 GLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK--QLIAGEANISYIC-SRFYR 123
G+ ++H + HRD+K N+L+D KI DFG A+ + A S I + Y
Sbjct: 136 GINFLHENHHI-HRDIKSANILLDE-AFTAKISDFGLARASEKFAQXVXXSRIVGTTAYX 193
Query: 124 APELIFGATEYTTSIDIWSAGCVLAELLLGQP 155
APE + G E T DI+S G VL E++ G P
Sbjct: 194 APEALRG--EITPKSDIYSFGVVLLEIITGLP 223
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 23/160 (14%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPES-------MYRVLK---HYSSANQRMPLI 55
HPN+I+L ++ +L L +EY P RVL+ ++ AN +
Sbjct: 75 HPNIINL-----LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 129
Query: 56 YVKL---YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG-SAKQLIAGE 111
+ + + RG+ Y+ + + HRDL +N+LV + KI DFG S Q + +
Sbjct: 130 SSQQLLHFAADVARGMDYL-SQKQFIHRDLAARNILVGE-NYVAKIADFGLSRGQEVYVK 187
Query: 112 ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ + R+ L + YTT+ D+WS G +L E++
Sbjct: 188 KTMGRLPVRWMAIESLNYSV--YTTNSDVWSYGVLLWEIV 225
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 49/204 (24%)
Query: 68 LAYIHTVPR--VCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANI---SYICSRFY 122
L +HT+ + + H DLKP N L+ + +K+ DFG A Q+ ++ S + + Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 222
Query: 123 RAPELIFGATE----------YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV 172
PE I + + D+WS GC+L + G+ P + ++Q+ ++ +
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAI 280
Query: 173 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL---LQYSPSLRC 229
+ +PN+ + FP I PE DL L L+ P R
Sbjct: 281 I-----------DPNH-EIEFPDI--------------PEK-DLQDVLKCCLKRDPKQRI 313
Query: 230 TALEACAHPFFDELREPNARLPNG 253
+ E AHP+ P ++ G
Sbjct: 314 SIPELLAHPYVQIQTHPVNQMAKG 337
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 49/204 (24%)
Query: 68 LAYIHTVPR--VCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANI---SYICSRFY 122
L +HT+ + + H DLKP N L+ + +K+ DFG A Q+ ++ S + + Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNY 222
Query: 123 RAPELIFGATE----------YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV 172
PE I + + D+WS GC+L + G+ P + ++Q+ ++ +
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAI 280
Query: 173 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL---LQYSPSLRC 229
+ +PN+ + FP I PE DL L L+ P R
Sbjct: 281 I-----------DPNH-EIEFPDI--------------PEK-DLQDVLKCCLKRDPKQRI 313
Query: 230 TALEACAHPFFDELREPNARLPNG 253
+ E AHP+ P ++ G
Sbjct: 314 SIPELLAHPYVQIQTHPVNQMAKG 337
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 16/156 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKL 59
M DHPN+I L+ ++ L + +V EY+ S+ L+ + M L+ +
Sbjct: 104 MGQFDHPNIIRLE----GVVTRGRLAM-IVTEYMENGSLDTFLRTHDGQFTIMQLVGM-- 156
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG-EANISYIC 118
+ G+ Y+ + V HRDL +N+LVD K+ DFG ++ L +A +
Sbjct: 157 -LRGVGAGMRYLSDLGYV-HRDLAARNVLVDS-NLVCKVSDFGLSRVLEDDPDAAXTTTG 213
Query: 119 SRF---YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ + APE I T ++++ D+WS G V+ E+L
Sbjct: 214 GKIPIRWTAPEAIAFRT-FSSASDVWSFGVVMWEVL 248
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 23/160 (14%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPES-------MYRVLK---HYSSANQRMPLI 55
HPN+I+L ++ +L L +EY P RVL+ ++ AN +
Sbjct: 85 HPNIINL-----LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 139
Query: 56 YVKL---YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG-SAKQLIAGE 111
+ + + RG+ Y+ + + HRDL +N+LV + KI DFG S Q + +
Sbjct: 140 SSQQLLHFAADVARGMDYL-SQKQFIHRDLAARNILVGE-NYVAKIADFGLSRGQEVYVK 197
Query: 112 ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ + R+ L + YTT+ D+WS G +L E++
Sbjct: 198 KTMGRLPVRWMAIESLNYSV--YTTNSDVWSYGVLLWEIV 235
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 67 GLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK--QLIAGEANISYIC-SRFYR 123
G+ ++H + HRD+K N+L+D KI DFG A+ + A S I + Y
Sbjct: 145 GINFLHENHHI-HRDIKSANILLDE-AFTAKISDFGLARASEKFAQTVMXSRIVGTTAYM 202
Query: 124 APELIFGATEYTTSIDIWSAGCVLAELLLGQP 155
APE + G E T DI+S G VL E++ G P
Sbjct: 203 APEALRG--EITPKSDIYSFGVVLLEIITGLP 232
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 83/204 (40%), Gaps = 49/204 (24%)
Query: 68 LAYIHTVPR--VCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANI---SYICSRFY 122
L +HT+ + + H DLKP N L+ + +K+ DFG A Q+ + S + + Y
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNY 194
Query: 123 RAPELIFGATE----------YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV 172
PE I + + D+WS GC+L + G+ P + ++Q+ ++ +
Sbjct: 195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAI 252
Query: 173 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL---LQYSPSLRC 229
+ +PN+ + FP I PE DL L L+ P R
Sbjct: 253 I-----------DPNH-EIEFPDI--------------PEK-DLQDVLKCCLKRDPKQRI 285
Query: 230 TALEACAHPFFDELREPNARLPNG 253
+ E AHP+ P ++ G
Sbjct: 286 SIPELLAHPYVQIQTHPVNQMAKG 309
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE---ANISYICS 119
Q+ G+AY+ + + HRDL +N LV VKI DFG ++ + + + A+ +
Sbjct: 182 QVAAGMAYL-SERKFVHRDLATRNCLVGE-NMVVKIADFGLSRNIYSADYYKADGNDAIP 239
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ PE IF YTT D+W+ G VL E+
Sbjct: 240 IRWMPPESIF-YNRYTTESDVWAYGVVLWEIF 270
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 67 GLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG---SAKQLIAGEANISYICSRFYR 123
G+ ++H + HRD+K N+L+D KI DFG ++++ + + Y
Sbjct: 145 GINFLHENHHI-HRDIKSANILLDE-AFTAKISDFGLARASEKFAQTVMXXRIVGTTAYM 202
Query: 124 APELIFGATEYTTSIDIWSAGCVLAELLLGQP 155
APE + G E T DI+S G VL E++ G P
Sbjct: 203 APEALRG--EITPKSDIYSFGVVLLEIITGLP 232
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 67 GLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG---SAKQLIAGEANISYICSRFYR 123
G+ ++H + HRD+K N+L+D KI DFG ++++ + + Y
Sbjct: 139 GINFLHENHHI-HRDIKSANILLDE-AFTAKISDFGLARASEKFAQXVMXXRIVGTTAYM 196
Query: 124 APELIFGATEYTTSIDIWSAGCVLAELLLGQP 155
APE + G E T DI+S G VL E++ G P
Sbjct: 197 APEALRG--EITPKSDIYSFGVVLLEIITGLP 226
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 70/179 (39%), Gaps = 46/179 (25%)
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPL--THQVKICDFGSAKQLIAGEANISYICSRF 121
I + Y+H++ + HRD+KP+NLL +K+ DFG AK+ GE
Sbjct: 126 IGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTGE---------- 173
Query: 122 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 181
+Y S D+WS G ++ LL G P F + + + + I
Sbjct: 174 -----------KYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRI 214
Query: 182 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 240
R + FP + W +V E L LL+ P+ R T E HP+
Sbjct: 215 R-----MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 260
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 29/169 (17%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVP--ESMYRVLKHYSSANQRMPLIY-V 57
M ++HPN++ L + +VME+VP + +R+L ++ P+ + V
Sbjct: 77 MSNLNHPNIVKLYGLMHNPP-------RMVMEFVPCGDLYHRLL------DKAHPIKWSV 123
Query: 58 KL-YTYQIFRGLAYIHTV-PRVCHRDLKPQNLLVDPLTHQVKIC----DFGSAKQLIAGE 111
KL I G+ Y+ P + HRDL+ N+ + L +C DF ++Q +
Sbjct: 124 KLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSV--- 180
Query: 112 ANISYICSRF-YRAPELIFGATE--YTTSIDIWSAGCVLAELLLGQPLF 157
++S + F + APE I GA E YT D +S +L +L G+ F
Sbjct: 181 HSVSGLLGNFQWMAPETI-GAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 18/103 (17%)
Query: 66 RGLAYIHT----------VPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE---A 112
RGL+Y+H P + HRD K +N+L+ V + DFG A + G+
Sbjct: 123 RGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAV-LADFGLAVRFEPGKPPGD 181
Query: 113 NISYICSRFYRAPELIFGATEYTTS----IDIWSAGCVLAELL 151
+ +R Y APE++ GA + ID+++ G VL EL+
Sbjct: 182 THGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELV 224
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 118/304 (38%), Gaps = 56/304 (18%)
Query: 2 RVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYT 61
++ +HPN++ + F + NEL++ + + H+ + + Y+
Sbjct: 81 KLFNHPNIVPYRATFIA---DNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYI---L 134
Query: 62 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF 121
+ + L YIH + V HR +K ++L+ + +V + S +I+ + F
Sbjct: 135 QGVLKALDYIHHMGYV-HRSVKASHILIS-VDGKVYLSGLRSNLSMIS-HGQRQRVVHDF 191
Query: 122 ---------YRAPELIFGATE-YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIK 171
+ +PE++ + Y DI+S G EL G F A L+E K
Sbjct: 192 PKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLE--K 249
Query: 172 VLGT------------------PTR--------EEIRCMNPNYTDFRFPQIKAHPWHKVF 205
+ GT P+R + + P ++ P +HP+H+ F
Sbjct: 250 LNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSP---SHPYHRTF 306
Query: 206 HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL-REPNARLPN-GRPLPPLFNFK 263
P + LQ +P R +A H FF ++ R + LP RP+ P+ NF+
Sbjct: 307 ----SPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRASEALPELLRPVTPITNFE 362
Query: 264 QELS 267
S
Sbjct: 363 GSQS 366
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 18/170 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKN---ELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYV 57
M+ HPNVI L +S+ + + M+Y Y + + + +PL +
Sbjct: 90 MKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTL 149
Query: 58 KLYTYQIFRGLAYIHTVPRVCHRDLKPQN-LLVDPLTHQVKICDFGSAKQLIAGEANISY 116
+ I G+ Y+ HRDL +N +L D +T V + DFG +K++ +G+ Y
Sbjct: 150 LKFMVDIALGMEYLSN-RNFLHRDLAARNCMLRDDMT--VCVADFGLSKKIYSGDY---Y 203
Query: 117 ICSRFYRAPELIFGATE------YTTSIDIWSAGCVLAELLL-GQPLFPG 159
R + P + + A E YT+ D+W+ G + E+ G +PG
Sbjct: 204 RQGRIAKMP-VKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPG 252
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 118/304 (38%), Gaps = 56/304 (18%)
Query: 2 RVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYT 61
++ +HPN++ + F + NEL++ + + H+ + + Y+
Sbjct: 65 KLFNHPNIVPYRATFIA---DNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYI---L 118
Query: 62 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF 121
+ + L YIH + V HR +K ++L+ + +V + S +I+ + F
Sbjct: 119 QGVLKALDYIHHMGYV-HRSVKASHILIS-VDGKVYLSGLRSNLSMIS-HGQRQRVVHDF 175
Query: 122 ---------YRAPELIFGATE-YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIK 171
+ +PE++ + Y DI+S G EL G F A L+E K
Sbjct: 176 PKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLE--K 233
Query: 172 VLGT------------------PTR--------EEIRCMNPNYTDFRFPQIKAHPWHKVF 205
+ GT P+R + + P ++ P +HP+H+ F
Sbjct: 234 LNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSP---SHPYHRTF 290
Query: 206 HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL-REPNARLPN-GRPLPPLFNFK 263
P + LQ +P R +A H FF ++ R + LP RP+ P+ NF+
Sbjct: 291 ----SPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRASEALPELLRPVTPITNFE 346
Query: 264 QELS 267
S
Sbjct: 347 GSQS 350
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKL 59
M DHPNVI L+ +T + ++ E++ S+ L+ + + +I +
Sbjct: 88 MGQFDHPNVIHLEGVVTKSTP-----VMIITEFMENGSLDSFLRQ---NDGQFTVIQLVG 139
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
I G+ Y+ + V HRDL +N+LV+ K+ DFG ++ L ++ +Y +
Sbjct: 140 MLRGIAAGMKYLADMNYV-HRDLAARNILVNS-NLVCKVSDFGLSRFLEDDTSDPTYTSA 197
Query: 120 RF------YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ APE I ++T++ D+WS G V+ E++
Sbjct: 198 LGGKIPIRWTAPEAI-QYRKFTSASDVWSYGIVMWEVM 234
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 22/155 (14%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQ 63
+DH +++ L ++ L LV +Y+P + +L H + + + Q
Sbjct: 90 LDHAHIVRLLGLCPGSS------LQLVTQYLP--LGSLLDHVRQHRGALGPQLLLNWGVQ 141
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA-------KQLIAGEANISY 116
I +G+ Y+ V HR+L +N+L+ + QV++ DFG A KQL+ EA
Sbjct: 142 IAKGMYYLEEHGMV-HRNLAARNVLLKSPS-QVQVADFGVADLLPPDDKQLLYSEAKTPI 199
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
++ + FG +YT D+WS G + EL+
Sbjct: 200 ---KWMALESIHFG--KYTHQSDVWSYGVTVWELM 229
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 23/160 (14%)
Query: 6 HPNVISLKHCFFSTTSKNELFLNLVMEYVPES-------MYRVLK---HYSSANQRMPLI 55
HPN+I+L ++ +L L +EY P RVL+ ++ AN +
Sbjct: 82 HPNIINL-----LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 136
Query: 56 YVKL---YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG-SAKQLIAGE 111
+ + + RG+ Y+ + + HR+L +N+LV + KI DFG S Q + +
Sbjct: 137 SSQQLLHFAADVARGMDYL-SQKQFIHRNLAARNILVGE-NYVAKIADFGLSRGQEVYVK 194
Query: 112 ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ + R+ L + YTT+ D+WS G +L E++
Sbjct: 195 KTMGRLPVRWMAIESLNYSV--YTTNSDVWSYGVLLWEIV 232
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 22/155 (14%)
Query: 4 MDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQ 63
+DH +++ L ++ L LV +Y+P + +L H + + + Q
Sbjct: 72 LDHAHIVRLLGLCPGSS------LQLVTQYLP--LGSLLDHVRQHRGALGPQLLLNWGVQ 123
Query: 64 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA-------KQLIAGEANISY 116
I +G+ Y+ V HR+L +N+L+ + QV++ DFG A KQL+ EA
Sbjct: 124 IAKGMYYLEEHGMV-HRNLAARNVLLKSPS-QVQVADFGVADLLPPDDKQLLYSEAKTPI 181
Query: 117 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
++ + FG +YT D+WS G + EL+
Sbjct: 182 ---KWMALESIHFG--KYTHQSDVWSYGVTVWELM 211
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 78 CHRDLKPQNLLV--DPLTHQVKICDFGSAKQLIAGEANI--SYICSRFYRAPELIFGATE 133
HRD+KP+N+LV D + + DFG A + + + + +Y APE F +
Sbjct: 156 THRDVKPENILVSADDFAY---LVDFGIASATTDEKLTQLGNTVGTLYYXAPER-FSESH 211
Query: 134 YTTSIDIWSAGCVLAELLLGQPLFPGEN 161
T DI++ CVL E L G P + G+
Sbjct: 212 ATYRADIYALTCVLYECLTGSPPYQGDQ 239
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 73/178 (41%), Gaps = 20/178 (11%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +DH N+I L + K +V E P + +L L + Y
Sbjct: 75 MHSLDHRNLIRLYGVVLTPPMK------MVTELAP--LGSLLDRLRKHQGHFLLGTLSRY 126
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
Q+ G+ Y+ + R HRDL +NLL+ VKI DFG + L + + Y+
Sbjct: 127 AVQVAEGMGYLES-KRFIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDH--YVMQE 182
Query: 121 FYR------APELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIK 171
+ APE + T ++ + D W G L E+ GQ + G N L +I K
Sbjct: 183 HRKVPFAWCAPESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 239
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 72/176 (40%), Gaps = 16/176 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +DH N+I L + K +V E P + +L L + Y
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMK------MVTELAP--LGSLLDRLRKHQGHFLLGTLSRY 116
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
Q+ G+ Y+ + R HRDL +NLL+ VKI DFG + L + + R
Sbjct: 117 AVQVAEGMGYLES-KRFIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHXVMQEHR 174
Query: 121 ----FYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIK 171
+ APE + T ++ + D W G L E+ GQ + G N L +I K
Sbjct: 175 KVPFAWCAPESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 72/176 (40%), Gaps = 16/176 (9%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +DH N+I L + K +V E P + +L L + Y
Sbjct: 75 MHSLDHRNLIRLYGVVLTPPMK------MVTELAP--LGSLLDRLRKHQGHFLLGTLSRY 126
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
Q+ G+ Y+ + R HRDL +NLL+ VKI DFG + L + + R
Sbjct: 127 AVQVAEGMGYLES-KRFIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHXVMQEHR 184
Query: 121 ----FYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIK 171
+ APE + T ++ + D W G L E+ GQ + G N L +I K
Sbjct: 185 KVPFAWCAPESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 239
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 73/178 (41%), Gaps = 20/178 (11%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +DH N+I L + K +V E P + +L L + Y
Sbjct: 69 MHSLDHRNLIRLYGVVLTPPMK------MVTELAP--LGSLLDRLRKHQGHFLLGTLSRY 120
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
Q+ G+ Y+ + R HRDL +NLL+ VKI DFG + L + + Y+
Sbjct: 121 AVQVAEGMGYLES-KRFIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDH--YVMQE 176
Query: 121 FYR------APELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIK 171
+ APE + T ++ + D W G L E+ GQ + G N L +I K
Sbjct: 177 HRKVPFAWCAPESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 233
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 73/178 (41%), Gaps = 20/178 (11%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +DH N+I L + K +V E P + +L L + Y
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMK------MVTELAP--LGSLLDRLRKHQGHFLLGTLSRY 116
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
Q+ G+ Y+ + R HRDL +NLL+ VKI DFG + L + + Y+
Sbjct: 117 AVQVAEGMGYLES-KRFIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDH--YVMQE 172
Query: 121 FYR------APELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIK 171
+ APE + T ++ + D W G L E+ GQ + G N L +I K
Sbjct: 173 HRKVPFAWCAPESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 73/178 (41%), Gaps = 20/178 (11%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +DH N+I L + K +V E P + +L L + Y
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMK------MVTELAP--LGSLLDRLRKHQGHFLLGTLSRY 116
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
Q+ G+ Y+ + R HRDL +NLL+ VKI DFG + L + + Y+
Sbjct: 117 AVQVAEGMGYLES-KRFIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDH--YVMQE 172
Query: 121 FYR------APELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIK 171
+ APE + T ++ + D W G L E+ GQ + G N L +I K
Sbjct: 173 HRKVPFAWCAPESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 73/178 (41%), Gaps = 20/178 (11%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLY 60
M +DH N+I L + K +V E P + +L L + Y
Sbjct: 69 MHSLDHRNLIRLYGVVLTPPMK------MVTELAP--LGSLLDRLRKHQGHFLLGTLSRY 120
Query: 61 TYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSR 120
Q+ G+ Y+ + R HRDL +NLL+ VKI DFG + L + + Y+
Sbjct: 121 AVQVAEGMGYLES-KRFIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDH--YVMQE 176
Query: 121 FYR------APELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIK 171
+ APE + T ++ + D W G L E+ GQ + G N L +I K
Sbjct: 177 HRKVPFAWCAPESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 233
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEA---NISYICS 119
+I G+AY++ + HRDL +N +V VKI DFG + + + +
Sbjct: 135 EIADGMAYLNA-KKFVHRDLAARNCMV-AHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 192
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAEL 150
+ APE + +TTS D+WS G VL E+
Sbjct: 193 VRWMAPESLKDGV-FTTSSDMWSFGVVLWEI 222
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEA---NISYICS 119
+I G+AY++ + HRDL +N +V VKI DFG + + + +
Sbjct: 138 EIADGMAYLNA-KKFVHRDLAARNCMV-AHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 195
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAEL 150
+ APE + +TTS D+WS G VL E+
Sbjct: 196 VRWMAPESLKDGV-FTTSSDMWSFGVVLWEI 225
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEA---NISYICS 119
+I G+AY++ + HRDL +N +V VKI DFG + + + +
Sbjct: 138 EIADGMAYLNA-KKFVHRDLAARNCMV-AHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 195
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAEL 150
+ APE + +TTS D+WS G VL E+
Sbjct: 196 VRWMAPESLKDGV-FTTSSDMWSFGVVLWEI 225
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE---ANISYICS 119
+I G+AY++ + HRDL +N +V VKI DFG + + + +
Sbjct: 138 EIADGMAYLNA-KKFVHRDLAARNCMV-AHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 195
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAEL 150
+ APE + +TTS D+WS G VL E+
Sbjct: 196 VRWMAPESLKDGV-FTTSSDMWSFGVVLWEI 225
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE---ANISYICS 119
+I G+AY++ + HRDL +N +V VKI DFG + + + +
Sbjct: 137 EIADGMAYLNA-KKFVHRDLAARNCMV-AHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 194
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAEL 150
+ APE + +TTS D+WS G VL E+
Sbjct: 195 VRWMAPESLKDGV-FTTSSDMWSFGVVLWEI 224
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 22/106 (20%)
Query: 64 IFRGLAYIHT-------VPRVCHRDLKPQNLLVDPLTHQVKICDFG-------SAKQLIA 109
I GLA++H P + HRDLK +N+LV Q I D G S QL
Sbjct: 114 IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKK-NGQCCIADLGLAVMHSQSTNQLDV 172
Query: 110 GEANISYICSRFYRAPELIFGATEYT-----TSIDIWSAGCVLAEL 150
G N + ++ Y APE++ + +DIW+ G VL E+
Sbjct: 173 G--NNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 22/106 (20%)
Query: 64 IFRGLAYIHT-------VPRVCHRDLKPQNLLVDPLTHQVKICDFG-------SAKQLIA 109
I GLA++H P + HRDLK +N+LV Q I D G S QL
Sbjct: 114 IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKK-NGQCCIADLGLAVMHSQSTNQLDV 172
Query: 110 GEANISYICSRFYRAPELIFGATEYT-----TSIDIWSAGCVLAEL 150
G N + ++ Y APE++ + +DIW+ G VL E+
Sbjct: 173 G--NNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 22/106 (20%)
Query: 64 IFRGLAYIHT-------VPRVCHRDLKPQNLLVDPLTHQVKICDFG-------SAKQLIA 109
I GLA++H P + HRDLK +N+LV Q I D G S QL
Sbjct: 143 IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKK-NGQCCIADLGLAVMHSQSTNQLDV 201
Query: 110 GEANISYICSRFYRAPELIFGATEYT-----TSIDIWSAGCVLAEL 150
G N + ++ Y APE++ + +DIW+ G VL E+
Sbjct: 202 G--NNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG----EANISYIC 118
+I G+AY++ + HRDL +N +V VKI DFG + + + +
Sbjct: 138 EIADGMAYLNA-KKFVHRDLAARNCMV-AHDFTVKIGDFGMTRDIYETAYYRKGGKGLLP 195
Query: 119 SRFYRAPELIFGATEYTTSIDIWSAGCVLAEL 150
R + APE + +TTS D+WS G VL E+
Sbjct: 196 VR-WMAPESLKDGV-FTTSSDMWSFGVVLWEI 225
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 66 RGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG-SAKQLIAGEANISYIC--SRFY 122
RGL Y+HT + HRD+K N+L+D KI DFG S K G+ ++ + + Y
Sbjct: 150 RGLHYLHTRA-IIHRDVKSINILLDE-NFVPKITDFGISKKGTELGQTHLXXVVKGTLGY 207
Query: 123 RAPELIFGATEYTTSIDIWSAGCVLAELL 151
PE F T D++S G VL E+L
Sbjct: 208 IDPEY-FIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 78/192 (40%), Gaps = 43/192 (22%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE---ANISYICS 119
+I G+AY++ + HR+L +N +V VKI DFG + + + +
Sbjct: 139 EIADGMAYLNA-KKFVHRNLAARNCMV-AHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 196
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAEL--LLGQPLFPGENAVDQLVEIIKVLGTPT 177
+ APE + +TTS D+WS G VL E+ L QP N +Q+++ +
Sbjct: 197 VRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN--EQVLKFV------- 246
Query: 178 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA- 236
M+ Y D P P DL Q++P++R T LE
Sbjct: 247 ------MDGGYLD--------QP------DNCPERVTDLMRMCWQFNPNMRPTFLEIVNL 286
Query: 237 -----HPFFDEL 243
HP F E+
Sbjct: 287 LKDDLHPSFPEV 298
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 78/192 (40%), Gaps = 43/192 (22%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE---ANISYICS 119
+I G+AY++ + HR+L +N +V VKI DFG + + + +
Sbjct: 138 EIADGMAYLNA-KKFVHRNLAARNCMV-AHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 195
Query: 120 RFYRAPELIFGATEYTTSIDIWSAGCVLAEL--LLGQPLFPGENAVDQLVEIIKVLGTPT 177
+ APE + +TTS D+WS G VL E+ L QP N +Q+++ +
Sbjct: 196 VRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN--EQVLKFV------- 245
Query: 178 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA- 236
M+ Y D P P DL Q++P++R T LE
Sbjct: 246 ------MDGGYLD--------QP------DNCPERVTDLMRMCWQFNPNMRPTFLEIVNL 285
Query: 237 -----HPFFDEL 243
HP F E+
Sbjct: 286 LKDDLHPSFPEV 297
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 18/158 (11%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKL 59
M DHPNVI L+ +T + ++ E++ S+ L+ + + +I +
Sbjct: 62 MGQFDHPNVIHLEGVVTKSTP-----VMIITEFMENGSLDSFLRQ---NDGQFTVIQLVG 113
Query: 60 YTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 119
I G+ Y+ + V HR L +N+LV+ K+ DFG ++ L ++ +Y +
Sbjct: 114 MLRGIAAGMKYLADMNYV-HRALAARNILVNS-NLVCKVSDFGLSRFLEDDTSDPTYTSA 171
Query: 120 RF------YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ APE I ++T++ D+WS G V+ E++
Sbjct: 172 LGGKIPIRWTAPEAI-QYRKFTSASDVWSYGIVMWEVM 208
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE----ANISYIC 118
+I G+AY++ + HRDL +N +V VKI DFG + + + +
Sbjct: 131 EIADGMAYLNA-NKFVHRDLAARNCMVAE-DFTVKIGDFGMTRDIXETDXXRKGGKGLLP 188
Query: 119 SRFYRAPELIFGATEYTTSIDIWSAGCVLAEL 150
R+ L G +TT D+WS G VL E+
Sbjct: 189 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEI 218
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 28/150 (18%)
Query: 35 PESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTH 94
P++M V A + L + QI G+ Y+ + HRDL +N LV
Sbjct: 113 PDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS-QHFVHRDLATRNCLVGA-NL 170
Query: 95 QVKICDFGSAKQLIAGEANISYICSRFYRA------------PELIFGATEYTTSIDIWS 142
VKI DFG ++ + + + +YR PE I ++TT D+WS
Sbjct: 171 LVKIGDFGMSRDVYS---------TDYYRVGGHTMLPIRWMPPESIM-YRKFTTESDVWS 220
Query: 143 AGCVLAELLL--GQPLFPGENAVDQLVEII 170
G +L E+ QP F N +++E I
Sbjct: 221 FGVILWEIFTYGKQPWFQLSNT--EVIECI 248
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE----ANISYIC 118
+I G+AY++ + HRDL +N +V VKI DFG + + + +
Sbjct: 140 EIADGMAYLNA-NKFVHRDLAARNCMVAE-DFTVKIGDFGMTRDIXETDXXRKGGKGLLP 197
Query: 119 SRFYRAPELIFGATEYTTSIDIWSAGCVLAEL 150
R+ L G +TT D+WS G VL E+
Sbjct: 198 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEI 227
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE----ANISYIC 118
+I G+AY++ + HRDL +N +V VKI DFG + + + +
Sbjct: 139 EIADGMAYLNA-NKFVHRDLAARNCMVAE-DFTVKIGDFGMTRDIYETDYYRKGGKGLLP 196
Query: 119 SRFYRAPELIFGATEYTTSIDIWSAGCVLAEL 150
R+ L G +TT D+WS G VL E+
Sbjct: 197 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEI 226
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE----ANISYIC 118
+I G+AY++ + HRDL +N +V VKI DFG + + + +
Sbjct: 146 EIADGMAYLNA-NKFVHRDLAARNCMVAE-DFTVKIGDFGMTRDIYETDYYRKGGKGLLP 203
Query: 119 SRFYRAPELIFGATEYTTSIDIWSAGCVLAEL 150
R+ L G +TT D+WS G VL E+
Sbjct: 204 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEI 233
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE----ANISYIC 118
+I G+AY++ + HRDL +N +V VKI DFG + + + +
Sbjct: 168 EIADGMAYLNA-NKFVHRDLAARNCMVAE-DFTVKIGDFGMTRDIYETDYYRKGGKGLLP 225
Query: 119 SRFYRAPELIFGATEYTTSIDIWSAGCVLAEL 150
R+ L G +TT D+WS G VL E+
Sbjct: 226 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEI 255
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE----ANISYIC 118
+I G+AY++ + HRDL +N +V VKI DFG + + + +
Sbjct: 146 EIADGMAYLNA-NKFVHRDLAARNCMVAE-DFTVKIGDFGMTRDIYETDYYRKGGKGLLP 203
Query: 119 SRFYRAPELIFGATEYTTSIDIWSAGCVLAEL 150
R+ L G +TT D+WS G VL E+
Sbjct: 204 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEI 233
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE----ANISYIC 118
+I G+AY++ + HRDL +N +V VKI DFG + + + +
Sbjct: 137 EIADGMAYLNA-NKFVHRDLAARNCMVAE-DFTVKIGDFGMTRDIYETDYYRKGGKGLLP 194
Query: 119 SRFYRAPELIFGATEYTTSIDIWSAGCVLAEL 150
R+ L G +TT D+WS G VL E+
Sbjct: 195 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEI 224
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE----ANISYIC 118
+I G+AY++ + HRDL +N +V VKI DFG + + + +
Sbjct: 133 EIADGMAYLNA-NKFVHRDLAARNCMVAE-DFTVKIGDFGMTRDIYETDYYRKGGKGLLP 190
Query: 119 SRFYRAPELIFGATEYTTSIDIWSAGCVLAEL 150
R+ L G +TT D+WS G VL E+
Sbjct: 191 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEI 220
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 22/212 (10%)
Query: 1 MRVMDHPNVISLKHCFFSTTSKNELFLNLV----MEYVPESMYRVLKHYSSANQRMPLIY 56
M+ DHP+V L + +K L + +V M++ + + +PL
Sbjct: 79 MKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQT 138
Query: 57 VKLYTYQIFRGLAYIHTVPRVCHRDLKPQN-LLVDPLTHQVKICDFGSAKQLIAGEANIS 115
+ + I G+ Y+ + HRDL +N +L + +T V + DFG ++++ +G+
Sbjct: 139 LVRFMVDIACGMEYLSS-RNFIHRDLAARNCMLAEDMT--VCVADFGLSRKIYSGDYYRQ 195
Query: 116 YICSRF---YRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPG-ENAVDQLVEII 170
S+ + A E + YT D+W+ G + E++ GQ + G ENA EI
Sbjct: 196 GCASKLPVKWLALESL-ADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA-----EIY 249
Query: 171 KVL--GTPTREEIRCMNPNYTDFRFPQIKAHP 200
L G ++ CM Y D + A P
Sbjct: 250 NYLIGGNRLKQPPECMEEVY-DLMYQCWSADP 280
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE----ANISYIC 118
+I G+AY++ + HRDL +N +V VKI DFG + + + +
Sbjct: 139 EIADGMAYLNA-NKFVHRDLAARNCMVAE-DFTVKIGDFGMTRDIYETDYYRKGGKGLLP 196
Query: 119 SRFYRAPELIFGATEYTTSIDIWSAGCVLAEL 150
R+ L G +TT D+WS G VL E+
Sbjct: 197 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEI 226
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE----ANISYIC 118
+I G+AY++ + HRDL +N +V VKI DFG + + + +
Sbjct: 140 EIADGMAYLNA-NKFVHRDLAARNCMVAE-DFTVKIGDFGMTRDIYETDYYRKGGKGLLP 197
Query: 119 SRFYRAPELIFGATEYTTSIDIWSAGCVLAEL 150
R+ L G +TT D+WS G VL E+
Sbjct: 198 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEI 227
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE----ANISYIC 118
+I G+AY++ + HRDL +N +V VKI DFG + + + +
Sbjct: 136 EIADGMAYLNA-NKFVHRDLAARNCMVAE-DFTVKIGDFGMTRDIYETDYYRKGGKGLLP 193
Query: 119 SRFYRAPELIFGATEYTTSIDIWSAGCVLAEL 150
R+ L G +TT D+WS G VL E+
Sbjct: 194 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEI 223
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 66 RGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYI-----CSR 120
RGL Y+HT + HRD+K N+L+D KI DFG +K+ E + +++ +
Sbjct: 150 RGLHYLHTRA-IIHRDVKSINILLDE-NFVPKITDFGISKK--GTELDQTHLXXVVKGTL 205
Query: 121 FYRAPELIFGATEYTTSIDIWSAGCVLAELL 151
Y PE F T D++S G VL E+L
Sbjct: 206 GYIDPEY-FIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 28/122 (22%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFY 122
QI G+ Y+ + HRDL +N LV VKI DFG ++ + + + +Y
Sbjct: 136 QIAAGMVYLAS-QHFVHRDLATRNCLVGE-NLLVKIGDFGMSRDVYS---------TDYY 184
Query: 123 RA------------PELIFGATEYTTSIDIWSAGCVLAELLL--GQPLFPGENAVDQLVE 168
R PE I ++TT D+WS G VL E+ QP + N ++++E
Sbjct: 185 RVGGHTMLPIRWMPPESIM-YRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN--NEVIE 241
Query: 169 II 170
I
Sbjct: 242 CI 243
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE----ANISYIC 118
+I G+AY++ + HRDL +N V VKI DFG + + + +
Sbjct: 133 EIADGMAYLNA-NKFVHRDLAARNCXVAE-DFTVKIGDFGMTRDIYETDYYRKGGKGLLP 190
Query: 119 SRFYRAPELIFGATEYTTSIDIWSAGCVLAEL 150
R+ L G +TT D+WS G VL E+
Sbjct: 191 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEI 220
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 24/104 (23%)
Query: 67 GLAYIHT-------VPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE-----ANI 114
GLA++H P + HRD K +N+LV Q I D G A G N
Sbjct: 117 GLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKS-NLQCCIADLGLAVMHSQGSDYLDIGNN 175
Query: 115 SYICSRFYRAPELI--------FGATEYTTSIDIWSAGCVLAEL 150
+ ++ Y APE++ F + ++T DIW+ G VL E+
Sbjct: 176 PRVGTKRYMAPEVLDEQIRTDCFESYKWT---DIWAFGLVLWEI 216
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 24/141 (17%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVD-PLT---HQVKICDFGSAKQLIAGEANISYIC 118
Q+ + Y+HT + +RD+KP+N LV P T H + I DFG AK+ I E +I
Sbjct: 108 QLITRMEYVHT-KSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPETK-KHIP 165
Query: 119 SRFYRAPELIFGATEYTT-----------SIDIWSAGCVLAELLLGQPLFPGENAVDQLV 167
YR + + G Y + D+ + G + L G + G A D L
Sbjct: 166 ---YREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKA-DTLK 221
Query: 168 EIIKVLGTPTRE---EIRCMN 185
E + +G R E+ C N
Sbjct: 222 ERYQKIGDTKRATPIEVLCEN 242
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
Q+ G+ Y+ + V HRDL +N LV VKI DFG ++ + + + + R
Sbjct: 166 QVAAGMVYLAGLHFV-HRDLATRNCLVGQ-GLVVKIGDFGMSRDIYS--TDYYRVGGRTM 221
Query: 122 ----YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ PE I ++TT D+WS G VL E+
Sbjct: 222 LPIRWMPPESIL-YRKFTTESDVWSFGVVLWEIF 254
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
Q+ G+ Y+ + V HRDL +N LV VKI DFG ++ + + + + R
Sbjct: 137 QVAAGMVYLAGLHFV-HRDLATRNCLVGQ-GLVVKIGDFGMSRDIYS--TDYYRVGGRTM 192
Query: 122 ----YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ PE I ++TT D+WS G VL E+
Sbjct: 193 LPIRWMPPESIL-YRKFTTESDVWSFGVVLWEIF 225
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRF- 121
Q+ G+ Y+ + V HRDL +N LV VKI DFG ++ + + + + R
Sbjct: 143 QVAAGMVYLAGLHFV-HRDLATRNCLVGQ-GLVVKIGDFGMSRDIYS--TDYYRVGGRTM 198
Query: 122 ----YRAPELIFGATEYTTSIDIWSAGCVLAELL 151
+ PE I ++TT D+WS G VL E+
Sbjct: 199 LPIRWMPPESIL-YRKFTTESDVWSFGVVLWEIF 231
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 34.7 bits (78), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 27/167 (16%)
Query: 3 VMDHPNVIS-LKHCFFSTTSKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLY 60
+M H N++ + T S +L+L + +Y S+Y LK + + M +KL
Sbjct: 87 LMRHENILGFIAADIKGTGSWTQLYL--ITDYHENGSLYDYLKSTTLDAKSM----LKL- 139
Query: 61 TYQIFRGLAYIHT-------VPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA--GE 111
Y GL ++HT P + HRDLK +N+LV I D G A + I+ E
Sbjct: 140 AYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKK-NGTCCIADLGLAVKFISDTNE 198
Query: 112 ANI---SYICSRFYRAPELI---FGATEYTTSI--DIWSAGCVLAEL 150
+I + + ++ Y PE++ + + I D++S G +L E+
Sbjct: 199 VDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLV----DPLTHQVKICDFGSAKQLIAGEAN 113
Q+ + Y+H+ + +RD+KP+N L+ + H + I DFG AK+ I E
Sbjct: 105 QLLSRMEYVHS-KNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETK 158
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 8/51 (15%)
Query: 39 YRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLV 89
YR++ ++ A + L+ Q+ RGL YIH++ V H D+KP N+ +
Sbjct: 104 YRIMSYFKEAELKDLLL-------QVGRGLRYIHSMSLV-HMDIKPSNIFI 146
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 8/51 (15%)
Query: 39 YRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLV 89
YR++ ++ A + L+ Q+ RGL YIH++ V H D+KP N+ +
Sbjct: 104 YRIMSYFKEAELKDLLL-------QVGRGLRYIHSMSLV-HMDIKPSNIFI 146
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 8/51 (15%)
Query: 39 YRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLV 89
YR++ ++ A + L+ Q+ RGL YIH++ V H D+KP N+ +
Sbjct: 106 YRIMSYFKEAELKDLLL-------QVGRGLRYIHSMSLV-HMDIKPSNIFI 148
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 8/51 (15%)
Query: 39 YRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLV 89
YR++ ++ A + L+ Q+ RGL YIH++ V H D+KP N+ +
Sbjct: 102 YRIMSYFKEAELKDLLL-------QVGRGLRYIHSMSLV-HMDIKPSNIFI 144
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 49 NQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLV--DPLTHQVKICDFGSAKQ 106
++++ L V + Q+ + ++H+ HRD+KP N L+ +QV I DFG AK+
Sbjct: 97 SRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK 155
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 29 LVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLL 88
+VME + S+ + ++ +++ L V L Q+ + YIH+ HRD+KP N L
Sbjct: 82 MVMELLGPSLEDL---FNFCSRKFSLKTVLLLADQMISRIEYIHS-KNFIHRDVKPDNFL 137
Query: 89 V--DPLTHQVKICDFGSAKQ 106
+ + V I DFG AK+
Sbjct: 138 MGLGKKGNLVYIIDFGLAKK 157
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 29 LVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLL 88
+VME + S+ + ++ +++ L V L Q+ + YIH+ HRD+KP N L
Sbjct: 82 MVMELLGPSLEDL---FNFCSRKFSLKTVLLLADQMISRIEYIHS-KNFIHRDVKPDNFL 137
Query: 89 V--DPLTHQVKICDFGSAKQ 106
+ + V I DFG AK+
Sbjct: 138 MGLGKKGNLVYIIDFGLAKK 157
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 59/141 (41%), Gaps = 24/141 (17%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLV----DPLTHQVKICDFGSAKQLIAGEANISYIC 118
Q+ + Y+H+ + +RD+KP+N L+ + + I DFG AK+ I E +I
Sbjct: 113 QLISRMEYVHS-KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPETK-KHIP 170
Query: 119 SRFYRAPELIFGATEYTT-----------SIDIWSAGCVLAELLLGQPLFPGENAVDQLV 167
YR + + G Y + D+ + G + L G + G A D L
Sbjct: 171 ---YREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKA-DTLK 226
Query: 168 EIIKVLGTPTRE---EIRCMN 185
E + +G R E+ C N
Sbjct: 227 ERYQKIGDTKRATPIEVLCEN 247
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 29 LVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLL 88
+VME + S+ + ++ +++ L V L Q+ + YIH+ HRD+KP N L
Sbjct: 80 MVMELLGPSLEDL---FNFCSRKFSLKTVLLLADQMISRIEYIHS-KNFIHRDVKPDNFL 135
Query: 89 V--DPLTHQVKICDFGSAKQ 106
+ + V I DFG AK+
Sbjct: 136 MGLGKKGNLVYIIDFGLAKK 155
>pdb|1QO0|A Chain A, Amide Receptor Of The Amidase Operon Of Pseudomonas
Aeruginosa (Amic) Complexed With The Positive Regulator
Amir.
pdb|1QO0|B Chain B, Amide Receptor Of The Amidase Operon Of Pseudomonas
Aeruginosa (Amic) Complexed With The Positive Regulator
Amir.
pdb|1PEA|A Chain A, Amide ReceptorNEGATIVE REGULATOR OF THE AMIDASE OPERON OF
Pseudomonas Aeruginosa (Amic) Complexed With Acetamide
Length = 385
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 17/114 (14%)
Query: 143 AGCVLAELLLGQPLFPGENAVDQLVEII----------KVLGTPTREEIRCMNPNYTDFR 192
G VL E+ + PL+P ++ + + VE I V+GT T E R + Y D R
Sbjct: 168 GGTVLEEIYI--PLYPSDDDLQRAVERIYQARADVVFSTVVGTGTAELYRAIARRYGDGR 225
Query: 193 FPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA----LEACAHPFFDE 242
P I + + +M + + + Y S+ A ++AC H FF E
Sbjct: 226 RPPIASLTTSEAEVAKMESDVAEGQVVVAPYFSSIDTPASRAFVQAC-HGFFPE 278
>pdb|1QNL|A Chain A, Amide ReceptorNEGATIVE REGULATOR OF THE AMIDASE OPERON OF
Pseudomonas Aeruginosa (Amic) Complexed With Butyramide
Length = 385
Score = 31.6 bits (70), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 17/114 (14%)
Query: 143 AGCVLAELLLGQPLFPGENAVDQLVEII----------KVLGTPTREEIRCMNPNYTDFR 192
G VL E+ + PL+P ++ + + VE I V+GT T E R + Y D R
Sbjct: 168 GGTVLEEIYI--PLYPSDDDLQRAVERIYQARADVVFSTVVGTGTAELYRAIARRYGDGR 225
Query: 193 FPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA----LEACAHPFFDE 242
P I + + +M + + + Y S+ A ++AC H FF E
Sbjct: 226 RPPIASLTTSEAEVAKMESDVAEGQVVVAPYFSSIDTPASRAFVQAC-HGFFPE 278
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 18/101 (17%)
Query: 67 GLAYIH-------TVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISY--- 116
GLA++H P + HRDLK +N+LV I D G A + + I
Sbjct: 151 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK-NGTCCIADLGLAVRHDSATDTIDIAPN 209
Query: 117 --ICSRFYRAPELIFGAT-----EYTTSIDIWSAGCVLAEL 150
+ ++ Y APE++ + E DI++ G V E+
Sbjct: 210 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 18/101 (17%)
Query: 67 GLAYIHT-------VPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISY--- 116
GLA++H P + HRDLK +N+LV I D G A + + I
Sbjct: 113 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK-NGTCCIADLGLAVRHDSATDTIDIAPN 171
Query: 117 --ICSRFYRAPELIFGAT-----EYTTSIDIWSAGCVLAEL 150
+ ++ Y APE++ + E DI++ G V E+
Sbjct: 172 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 18/101 (17%)
Query: 67 GLAYIHT-------VPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISY--- 116
GLA++H P + HRDLK +N+LV I D G A + + I
Sbjct: 112 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK-NGTCCIADLGLAVRHDSATDTIDIAPN 170
Query: 117 --ICSRFYRAPELIFGAT-----EYTTSIDIWSAGCVLAEL 150
+ ++ Y APE++ + E DI++ G V E+
Sbjct: 171 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 18/101 (17%)
Query: 67 GLAYIHT-------VPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISY--- 116
GLA++H P + HRDLK +N+LV I D G A + + I
Sbjct: 138 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK-NGTCCIADLGLAVRHDSATDTIDIAPN 196
Query: 117 --ICSRFYRAPELIFGAT-----EYTTSIDIWSAGCVLAEL 150
+ ++ Y APE++ + E DI++ G V E+
Sbjct: 197 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 18/101 (17%)
Query: 67 GLAYIHT-------VPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISY--- 116
GLA++H P + HRDLK +N+LV I D G A + + I
Sbjct: 118 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK-NGTCCIADLGLAVRHDSATDTIDIAPN 176
Query: 117 --ICSRFYRAPELIFGAT-----EYTTSIDIWSAGCVLAEL 150
+ ++ Y APE++ + E DI++ G V E+
Sbjct: 177 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 18/101 (17%)
Query: 67 GLAYIH-------TVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISY--- 116
GLA++H P + HRDLK +N+LV I D G A + + I
Sbjct: 115 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK-NGTCCIADLGLAVRHDSATDTIDIAPN 173
Query: 117 --ICSRFYRAPELIFGAT-----EYTTSIDIWSAGCVLAEL 150
+ ++ Y APE++ + E DI++ G V E+
Sbjct: 174 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 24/141 (17%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLV----DPLTHQVKICDFGSAKQLIAGEANISYIC 118
Q+ + Y+H+ + +RD+KP+N L+ + + I DF AK+ I E +I
Sbjct: 113 QLISRMEYVHS-KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETK-KHIP 170
Query: 119 SRFYRAPELIFGATEYTT-----------SIDIWSAGCVLAELLLGQPLFPGENAVDQLV 167
YR + + G Y + D+ + G + L G + G A D L
Sbjct: 171 ---YREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKA-DTLK 226
Query: 168 EIIKVLGTPTRE---EIRCMN 185
E + +G R E+ C N
Sbjct: 227 ERYQKIGDTKRATPIEVLCEN 247
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 24/141 (17%)
Query: 63 QIFRGLAYIHTVPRVCHRDLKPQNLLV----DPLTHQVKICDFGSAKQLIAGEANISYIC 118
Q+ + Y+H+ + +RD+KP+N L+ + + I DF AK+ I E +I
Sbjct: 134 QLISRMEYVHS-KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETK-KHIP 191
Query: 119 SRFYRAPELIFGATEYTT-----------SIDIWSAGCVLAELLLGQPLFPGENAVDQLV 167
YR + + G Y + D+ + G + L G + G A D L
Sbjct: 192 ---YREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKA-DTLK 247
Query: 168 EIIKVLGTPTRE---EIRCMN 185
E + +G R E+ C N
Sbjct: 248 ERYQKIGDTKRATPIEVLCEN 268
>pdb|2GEE|A Chain A, Crystal Structure Of Human Type Iii Fibronectin
Extradomain B And Domain 8
Length = 203
Score = 28.1 bits (61), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 175 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSP 225
TPT + P TD RF I + PP +IDL + L++YSP
Sbjct: 104 TPTTLTQQTAVPPPTDLRFTNIGPDTMRVTW---APPPSIDLTNFLVRYSP 151
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.140 0.437
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,206,949
Number of Sequences: 62578
Number of extensions: 392138
Number of successful extensions: 3616
Number of sequences better than 100.0: 936
Number of HSP's better than 100.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 432
Number of HSP's that attempted gapping in prelim test: 1546
Number of HSP's gapped (non-prelim): 972
length of query: 296
length of database: 14,973,337
effective HSP length: 98
effective length of query: 198
effective length of database: 8,840,693
effective search space: 1750457214
effective search space used: 1750457214
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 51 (24.3 bits)