BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>022501
MDVQVIANLEELKLSGKDITMICHDHLPKHLFQNLKSLEIVSDKSDNFSIGFLQRFHNVE
RLKLRNSSYKEIFSNGEVEKQAGMLTQIKSLKLWELSNLLHIWEQCYKLDSVFQNLETLE
IWWCNNLINLVPSSASFENLTTLEVSYCQRLKNLVSSSTAKSLVCLMKLRIDGCKLMTEI
ISSEGDVEEDEIVFSRLKWLSLECLDSLTSFCSGNCTFKFPSLEDLFVIDCPKMMIFSFG
VLSTPRLREVRKNWGLDKGCWEGNLNTTIQKLCNNKLPPMVPFSSRFLYLRLLCHQ

High Scoring Gene Products

Symbol, full name Information P value
AT2G14080 protein from Arabidopsis thaliana 5.8e-06
AT1G61300 protein from Arabidopsis thaliana 0.00044
AT1G61180 protein from Arabidopsis thaliana 0.00070
RPS2
AT4G26090
protein from Arabidopsis thaliana 0.00071

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  022501
        (296 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2053405 - symbol:AT2G14080 species:3702 "Arabi...   138  5.8e-06   1
TAIR|locus:2197739 - symbol:AT1G61300 species:3702 "Arabi...   119  0.00044   1
TAIR|locus:2008440 - symbol:AT1G61180 species:3702 "Arabi...   118  0.00070   1
TAIR|locus:2005517 - symbol:RPS2 "RESISTANT TO P. SYRINGA...   118  0.00071   1


>TAIR|locus:2053405 [details] [associations]
            symbol:AT2G14080 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005622
            "intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
            [GO:0006952 "defense response" evidence=IEA;ISS] [GO:0007165
            "signal transduction" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0043531 "ADP
            binding" evidence=IEA] Pfam:PF00560 InterPro:IPR000157
            InterPro:IPR001611 InterPro:IPR000767 InterPro:IPR002182
            InterPro:IPR003593 Pfam:PF00931 Pfam:PF01582 PRINTS:PR00364
            PROSITE:PS50104 SMART:SM00255 SMART:SM00382 GO:GO:0005524
            GO:GO:0007165 EMBL:CP002685 GO:GO:0006952 GO:GO:0043531
            GO:GO:0005622 GO:GO:0017111 InterPro:IPR011713 Pfam:PF07725
            SUPFAM:SSF52200 IPI:IPI00529099 RefSeq:NP_179024.1 UniGene:At.43244
            ProteinModelPortal:F4IFF6 SMR:F4IFF6 PRIDE:F4IFF6
            EnsemblPlants:AT2G14080.1 GeneID:815893 KEGG:ath:AT2G14080
            OMA:PMTCFPS ArrayExpress:F4IFF6 Uniprot:F4IFF6
        Length = 1215

 Score = 138 (53.6 bits), Expect = 5.8e-06, P = 5.8e-06
 Identities = 67/229 (29%), Positives = 101/229 (44%)

Query:     9 LEELKLSGKDITMICHDHLPKHLFQNLKSLEIVSDKSDNFSIGFLQRFHNVERLKLRNSS 68
             L EL + G  +  +  +  P    +NLK +++ S K+    +  L    N+E L L   S
Sbjct:   653 LVELNMWGSKLEKLWEEIQP---LRNLKRMDLFSSKNLK-ELPDLSSATNLEVLNLNGCS 708

Query:    69 YKEIFSNGEVEKQAGMLTQIKSLKLWELSNLLHIWEQCYKLDSVFQNLETLEIWWCNNLI 128
                  S  E+    G  T++  LKL ELS    + E    + +   NL+T++   C NL+
Sbjct:   709 -----SLVELPFSIGNATKL--LKL-ELSGCSSLLELPSSIGNAI-NLQTIDFSHCENLV 759

Query:   129 NLVPSSASFENLTTLEVSYCQRLKNLVSSSTAKSLVCLMKLRIDGCKLMTEIISSEGDVE 188
              L  S  +  NL  L++S C  LK L SS    +   L KL +  C  + E+ SS G+  
Sbjct:   760 ELPSSIGNATNLKELDLSCCSSLKELPSS--IGNCTNLKKLHLICCSSLKELPSSIGNC- 816

Query:   189 EDEIVFSRLKWLSLECLDSLTSFCS--GNCTFKFPSLEDLFVIDCPKMM 235
                   + LK L L C  SL    S  GN      +LE L +  C  ++
Sbjct:   817 ------TNLKELHLTCCSSLIKLPSSIGNAI----NLEKLILAGCESLV 855


>TAIR|locus:2197739 [details] [associations]
            symbol:AT1G61300 species:3702 "Arabidopsis thaliana"
            [GO:0006952 "defense response" evidence=IEA;ISS] [GO:0043531 "ADP
            binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
            InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931 PRINTS:PR00364
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886
            GO:GO:0005524 GO:GO:0006952 GO:GO:0043531 EMBL:AC004255
            HOGENOM:HOG000238348 ProtClustDB:CLSN2681834 EMBL:AK226587
            EMBL:AY099608 EMBL:AY128858 IPI:IPI00535662 RefSeq:NP_176325.2
            UniGene:At.36488 UniGene:At.74126 ProteinModelPortal:O64790
            SMR:O64790 PaxDb:O64790 EnsemblPlants:AT1G61300.1 GeneID:842424
            KEGG:ath:AT1G61300 TAIR:At1g61300 eggNOG:KOG4658 InParanoid:O64790
            OMA:WITSEEN PhylomeDB:O64790 Genevestigator:O64790
            GermOnline:AT1G61300 Uniprot:O64790
        Length = 762

 Score = 119 (46.9 bits), Expect = 0.00044, P = 0.00044
 Identities = 58/224 (25%), Positives = 96/224 (42%)

Query:    34 NLKSLEIVSDK--SDNFSIGFLQRFHNVERLKLRNS---SYKEIFSNG-EVEKQAGMLTQ 87
             +L+ L ++  K   D   +  LQ+  N++ L +  S   S  +  +N   +    G L +
Sbjct:   517 SLRLLRLLGSKVHGDASVLKELQKLQNLQHLAITLSAELSLNQRLANLISILGIEGFLQK 576

Query:    88 IKSLK-LWELSNLLHIWEQCYKLDSVFQNLETLEIWWCNNLINLVPSSASFENLTTLEVS 146
                L  L  + NL  +W +    +S F  ++  E    ++ + + P    F NL+ L +S
Sbjct:   577 PFDLSFLASMENLSSLWVK----NSYFSEIKCRESETASSYLRINPKIPCFTNLSRLGLS 632

Query:   147 YCQRLKNLVSSSTAKSLVCLMKLRIDGCKLMTEIISSEGDVEEDEIV-FSRLKWLSLECL 205
              C  +K+L     A +LV L    I+  + + EII+ E       I  F +L+ L L  L
Sbjct:   633 KCHSIKDLTWILFAPNLVYLY---IEDSREVGEIINKEKATNLTSITPFLKLERLILYNL 689

Query:   206 DSLTSFCSGNCTFKFPSLEDLFVIDCPKMMIFSFGVLSTPRLRE 249
               L S         FP L  + V+DCPK+        S P + E
Sbjct:   690 PKLESIYWS--PLHFPRLLIIHVLDCPKLRKLPLNATSVPLVEE 731


>TAIR|locus:2008440 [details] [associations]
            symbol:AT1G61180 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0006952
            "defense response" evidence=IEA;ISS] [GO:0043531 "ADP binding"
            evidence=IEA] InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931
            PRINTS:PR00364 EMBL:CP002684 GO:GO:0005886 GO:GO:0006952
            GO:GO:0043531 HOGENOM:HOG000238348 EMBL:AC002294
            ProtClustDB:CLSN2681834 IPI:IPI00657523 RefSeq:NP_001031216.1
            UniGene:At.21819 UniGene:At.67768 ProteinModelPortal:Q2V4G0
            SMR:Q2V4G0 PRIDE:Q2V4G0 EnsemblPlants:AT1G61180.2 GeneID:842411
            KEGG:ath:AT1G61180 OMA:WASATTI Genevestigator:Q2V4G0 Uniprot:Q2V4G0
        Length = 899

 Score = 118 (46.6 bits), Expect = 0.00070, P = 0.00070
 Identities = 68/253 (26%), Positives = 112/253 (44%)

Query:     9 LEELK-LSGKDITM---ICHDHLPKHLFQNLKSLEIVSDK--SDNFSIGFLQRFHNVERL 62
             L+ELK L+  D+T    +C       L  +L+ L ++  K   D   +  LQ+  N++ L
Sbjct:   600 LKELKKLTFLDLTYTDRLCSISGISRLL-SLRLLRLLGSKVHGDASVLKELQQLQNLQEL 658

Query:    63 KLRNSSYKEIFS-NGEVEKQAGMLTQIKSL-KLWELSNLLHIWEQCYKL---DSVFQNLE 117
              +  S+  E+ S +  + K    L     L K ++LS L  + E    L   +S F  ++
Sbjct:   659 AITVSA--ELISLDQRLAKLISNLCIEGFLQKPFDLSFLASM-ENLSSLRVENSYFSEIK 715

Query:   118 TLEIWWCNNLINLVPSSASFENLTTLEVSYCQRLKNLVSSSTAKSLVCLMKLRIDGCKLM 177
               E    ++ + + P    F NL+ LE+  C  +K+L     A +LV L+   I+  + +
Sbjct:   716 CRESETESSYLRINPKIPCFTNLSRLEIMKCHSMKDLTWILFAPNLVVLL---IEDSREV 772

Query:   178 TEIISSEGDVEEDEIV-FSRLKWLSLECLDSLTSFCSGNCTFKFPSLEDLFVIDCPKMMI 236
              EII+ E       I  F +L+WL L  L  L S         FP L  + V +CPK+  
Sbjct:   773 GEIINKEKATNLTSITPFLKLEWLILYNLPKLESIYWS--PLPFPVLLTMDVSNCPKLRK 830

Query:   237 FSFGVLSTPRLRE 249
                   S  ++ E
Sbjct:   831 LPLNATSVSKVEE 843


>TAIR|locus:2005517 [details] [associations]
            symbol:RPS2 "RESISTANT TO P. SYRINGAE 2" species:3702
            "Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0006952 "defense response" evidence=ISS;TAS]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0043531 "ADP binding" evidence=IEA] [GO:0009626 "plant-type
            hypersensitive response" evidence=IMP] [GO:0016045 "detection of
            bacterium" evidence=RCA;IMP] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0042742 "defense response to bacterium" evidence=RCA;IMP]
            [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612 "protein
            targeting to membrane" evidence=RCA] [GO:0009595 "detection of
            biotic stimulus" evidence=RCA] [GO:0009617 "response to bacterium"
            evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
            evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
            acid mediated signaling pathway" evidence=RCA] [GO:0009863
            "salicylic acid mediated signaling pathway" evidence=RCA]
            [GO:0009867 "jasmonic acid mediated signaling pathway"
            evidence=RCA] [GO:0009963 "positive regulation of flavonoid
            biosynthetic process" evidence=RCA] [GO:0010200 "response to
            chitin" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
            metabolic process" evidence=RCA] [GO:0010363 "regulation of
            plant-type hypersensitive response" evidence=RCA] [GO:0031347
            "regulation of defense response" evidence=RCA] [GO:0031348
            "negative regulation of defense response" evidence=RCA] [GO:0043069
            "negative regulation of programmed cell death" evidence=RCA]
            [GO:0043900 "regulation of multi-organism process" evidence=RCA]
            [GO:0045087 "innate immune response" evidence=RCA] [GO:0050776
            "regulation of immune response" evidence=RCA] [GO:0050832 "defense
            response to fungus" evidence=RCA] [GO:0051707 "response to other
            organism" evidence=RCA] InterPro:IPR000767 InterPro:IPR002182
            InterPro:IPR003593 Pfam:PF00931 PRINTS:PR00364 SMART:SM00382
            GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0016045
            EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161564 GO:GO:0042742
            eggNOG:COG4886 GO:GO:0043531 EMBL:AL049483 GO:GO:0009626
            GO:GO:0017111 UniGene:At.46720 UniGene:At.69675 EMBL:U14158
            EMBL:U12860 EMBL:AF368301 EMBL:AF487797 EMBL:AF487798 EMBL:AF487799
            EMBL:AF487800 EMBL:AF487801 EMBL:AF487802 EMBL:AF487803
            EMBL:AF487804 EMBL:AF487805 EMBL:AF487806 EMBL:AF487807
            EMBL:AF487808 EMBL:AF487809 EMBL:AF487810 EMBL:AF487811
            EMBL:AF487812 EMBL:AF487813 EMBL:AF487814 EMBL:AF487815
            EMBL:AF487816 EMBL:AF487817 EMBL:AF487818 EMBL:AF487819
            EMBL:AF487820 EMBL:AF487821 EMBL:AF487822 EMBL:AF487823
            EMBL:AK117214 EMBL:BT005972 EMBL:U97217 IPI:IPI00547830 PIR:A54809
            RefSeq:NP_194339.1 UniGene:At.75226 PDB:2FT5 PDBsum:2FT5
            ProteinModelPortal:Q42484 SMR:Q42484 DIP:DIP-53465N IntAct:Q42484
            STRING:Q42484 EnsemblPlants:AT4G26090.1 GeneID:828715
            KEGG:ath:AT4G26090 TAIR:At4g26090 InParanoid:Q42484 KO:K13459
            OMA:AFNNDLE PhylomeDB:Q42484 ProtClustDB:CLSN2685902
            Genevestigator:Q42484 GermOnline:AT4G26090 Uniprot:Q42484
        Length = 909

 Score = 118 (46.6 bits), Expect = 0.00071, P = 0.00071
 Identities = 37/129 (28%), Positives = 60/129 (46%)

Query:   115 NLETLEIWWCNNLINLVPSSAS---FENLTTLEVSYCQRLKNLVSSSTAKSLVCLMKLRI 171
             +LE L +   +NL  +  +S S     N+  + +S+C +LKN+   S  + L  L  + +
Sbjct:   746 SLEVLTLHSLHNLTRVWGNSVSQDCLRNIRCINISHCNKLKNV---SWVQKLPKLEVIEL 802

Query:   172 DGCKLMTEIISS-EGDVEEDEIVFSRLKWLSLECLDSLTSFCSGNCTFKFPSLEDLFVID 230
               C+ + E+IS  E    ED  +F  LK L    L  L S       F F  +E L + +
Sbjct:   803 FDCREIEELISEHESPSVEDPTLFPSLKTLRTRDLPELNSILPSR--FSFQKVETLVITN 860

Query:   231 CPKMMIFSF 239
             CP++    F
Sbjct:   861 CPRVKKLPF 869


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.136   0.420    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      296       296   0.00093  115 3  11 22  0.49    33
                                                     33  0.44    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  615 (65 KB)
  Total size of DFA:  233 KB (2126 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  27.52u 0.10s 27.62t   Elapsed:  00:00:14
  Total cpu time:  27.52u 0.10s 27.62t   Elapsed:  00:00:14
  Start:  Fri May 10 03:01:24 2013   End:  Fri May 10 03:01:38 2013

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