Query 022502
Match_columns 296
No_of_seqs 301 out of 1384
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 04:02:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022502.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022502hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00052 prolyl 4-hydroxylase; 100.0 9.4E-80 2E-84 567.2 24.6 269 25-296 37-308 (310)
2 KOG1591 Prolyl 4-hydroxylase a 100.0 1.2E-51 2.7E-56 376.0 16.6 209 20-247 75-288 (289)
3 smart00702 P4Hc Prolyl 4-hydro 100.0 1.4E-36 3E-41 260.8 18.2 174 42-242 1-178 (178)
4 PRK05467 Fe(II)-dependent oxyg 100.0 9.4E-29 2E-33 218.8 14.9 168 44-247 2-182 (226)
5 PHA02813 hypothetical protein; 99.7 6.9E-18 1.5E-22 155.5 11.4 137 66-242 35-181 (354)
6 PHA02869 C4L/C10L-like gene fa 99.7 6.4E-18 1.4E-22 157.6 11.1 140 67-244 45-192 (418)
7 PF13640 2OG-FeII_Oxy_3: 2OG-F 99.7 1.8E-16 3.9E-21 123.2 6.4 91 122-242 1-100 (100)
8 COG3128 PiuC Uncharacterized i 99.6 2.6E-15 5.5E-20 126.7 9.3 169 42-246 2-184 (229)
9 smart00254 ShKT ShK toxin doma 99.1 3.4E-11 7.4E-16 74.9 1.0 33 256-296 1-33 (33)
10 KOG3710 EGL-Nine (EGLN) protei 99.1 2.7E-09 5.9E-14 93.1 12.4 164 43-245 54-241 (280)
11 PF01549 ShK: ShK domain-like; 98.8 1.4E-09 3E-14 69.5 0.2 36 255-296 1-38 (38)
12 PF13661 2OG-FeII_Oxy_4: 2OG-F 98.6 5.4E-08 1.2E-12 71.0 4.4 52 119-174 10-65 (70)
13 PF03336 Pox_C4_C10: Poxvirus 98.6 3E-07 6.5E-12 85.2 9.8 127 84-243 39-169 (339)
14 COG3751 EGL-9 Predicted prolin 98.5 1.9E-06 4.1E-11 77.4 11.7 101 121-245 137-242 (252)
15 PF03171 2OG-FeII_Oxy: 2OG-Fe( 98.4 1.9E-07 4.2E-12 71.9 3.3 90 120-242 2-97 (98)
16 PHA02866 Hypothetical protein; 98.3 3.1E-06 6.8E-11 76.9 8.6 136 65-242 30-168 (333)
17 TIGR02408 ectoine_ThpD ectoine 98.0 8.8E-05 1.9E-09 68.2 12.6 194 35-241 22-247 (277)
18 PF09859 Oxygenase-NA: Oxygena 97.8 8E-05 1.7E-09 62.4 7.3 102 121-243 63-172 (173)
19 PF13759 2OG-FeII_Oxy_5: Putat 97.7 8E-05 1.7E-09 57.9 5.6 93 125-237 5-98 (101)
20 KOG3844 Predicted component of 97.7 0.00066 1.4E-08 64.2 11.8 176 40-249 33-223 (476)
21 PF05721 PhyH: Phytanoyl-CoA d 97.5 0.0004 8.8E-09 59.3 8.4 170 44-232 6-206 (211)
22 TIGR02466 conserved hypothetic 97.3 0.0013 2.9E-08 57.7 8.3 95 124-238 100-195 (201)
23 TIGR01762 chlorin-enz chlorina 97.1 0.025 5.5E-07 52.3 15.5 187 38-241 11-247 (288)
24 PF13532 2OG-FeII_Oxy_2: 2OG-F 96.8 0.005 1.1E-07 53.0 8.0 153 44-232 2-177 (194)
25 PF12851 Tet_JBP: Oxygenase do 96.3 0.016 3.4E-07 49.6 7.2 79 132-242 86-170 (171)
26 PRK15401 alpha-ketoglutarate-d 96.0 0.24 5.2E-06 43.9 13.5 160 40-232 16-196 (213)
27 PHA02923 hypothetical protein; 95.6 0.083 1.8E-06 48.6 8.9 101 98-243 43-145 (315)
28 KOG3200 Uncharacterized conser 94.4 0.15 3.3E-06 43.4 6.8 94 38-140 8-108 (224)
29 COG3826 Uncharacterized protei 93.9 0.27 5.8E-06 42.3 7.2 103 120-243 124-234 (236)
30 KOG3371 Uncharacterized conser 92.9 0.032 7E-07 50.0 0.3 47 236-296 14-62 (243)
31 PF06822 DUF1235: Protein of u 88.5 3.2 7E-05 37.8 8.7 108 98-246 32-140 (266)
32 KOG3959 2-Oxoglutarate- and ir 85.6 1.2 2.5E-05 39.9 4.2 113 24-142 48-176 (306)
33 COG3145 AlkB Alkylated DNA rep 85.2 16 0.00035 31.9 11.1 98 85-210 71-170 (194)
34 PLN02485 oxidoreductase 83.2 7.9 0.00017 36.4 9.0 48 196-244 237-288 (329)
35 PLN02984 oxidoreductase, 2OG-F 82.1 13 0.00028 35.3 10.0 87 121-243 201-298 (341)
36 PLN03001 oxidoreductase, 2OG-F 80.7 13 0.00028 33.9 9.1 47 196-243 163-213 (262)
37 KOG4176 Uncharacterized conser 80.1 31 0.00067 32.6 11.6 117 98-246 189-307 (323)
38 PLN02639 oxidoreductase, 2OG-F 77.8 19 0.00041 34.0 9.7 88 121-243 191-288 (337)
39 PHA02985 hypothetical protein; 77.4 17 0.00037 33.1 8.6 106 98-245 39-144 (271)
40 PLN00417 oxidoreductase, 2OG-F 77.2 16 0.00034 34.8 8.9 88 121-243 204-301 (348)
41 PF10057 DUF2294: Uncharacteri 77.0 7 0.00015 31.1 5.6 90 1-115 1-91 (118)
42 PF14033 DUF4246: Protein of u 76.9 9.2 0.0002 38.3 7.5 100 126-244 359-479 (501)
43 PLN02904 oxidoreductase 75.8 23 0.00049 33.8 9.7 87 121-243 209-305 (357)
44 PLN02299 1-aminocyclopropane-1 75.5 28 0.0006 32.7 10.0 89 121-244 159-257 (321)
45 PLN02216 protein SRG1 74.0 19 0.00042 34.3 8.7 47 196-243 258-308 (357)
46 COG4340 Uncharacterized protei 73.4 5.9 0.00013 34.3 4.4 64 156-243 148-215 (226)
47 COG5285 Protein involved in bi 72.2 17 0.00038 33.7 7.5 98 133-246 133-233 (299)
48 PLN02276 gibberellin 20-oxidas 71.5 27 0.00058 33.3 9.0 88 120-243 206-303 (361)
49 TIGR00568 alkb DNA alkylation 71.4 42 0.00091 28.5 9.3 41 99-139 74-114 (169)
50 PLN02912 oxidoreductase, 2OG-F 70.9 20 0.00044 34.0 8.0 88 121-244 198-295 (348)
51 PLN02403 aminocyclopropanecarb 70.9 18 0.00038 33.7 7.4 48 196-244 201-253 (303)
52 PLN02365 2-oxoglutarate-depend 70.9 23 0.00051 32.8 8.3 47 196-243 199-249 (300)
53 KOG4459 Membrane-associated pr 70.2 0.9 2E-05 44.3 -1.3 74 150-246 364-437 (471)
54 PLN02947 oxidoreductase 68.6 41 0.00088 32.3 9.6 87 121-243 226-322 (374)
55 PLN02515 naringenin,2-oxogluta 67.8 29 0.00063 33.1 8.3 48 196-244 244-295 (358)
56 PLN02758 oxidoreductase, 2OG-F 66.9 34 0.00074 32.6 8.7 46 196-242 260-309 (361)
57 PLN02750 oxidoreductase, 2OG-F 66.9 49 0.0011 31.3 9.7 48 196-244 242-293 (345)
58 PLN02997 flavonol synthase 65.7 25 0.00053 33.1 7.3 88 121-244 184-281 (325)
59 KOG0143 Iron/ascorbate family 65.4 33 0.00072 32.2 8.1 87 121-241 177-273 (322)
60 PF02668 TauD: Taurine catabol 65.3 6.7 0.00014 34.6 3.3 38 195-240 219-258 (258)
61 COG2850 Uncharacterized conser 64.7 15 0.00033 35.1 5.6 41 98-142 100-141 (383)
62 PTZ00273 oxidase reductase; Pr 64.5 39 0.00084 31.5 8.4 47 196-244 226-276 (320)
63 PLN02254 gibberellin 3-beta-di 64.3 52 0.0011 31.4 9.3 87 121-242 211-307 (358)
64 PF10014 2OG-Fe_Oxy_2: 2OG-Fe 63.1 4.9 0.00011 35.0 1.9 56 151-231 124-179 (195)
65 cd00250 CAS_like Clavaminic ac 58.2 15 0.00031 33.1 4.2 40 195-242 218-260 (262)
66 PLN02393 leucoanthocyanidin di 56.6 92 0.002 29.7 9.6 48 196-244 261-312 (362)
67 PLN02704 flavonol synthase 55.5 36 0.00077 32.1 6.5 48 196-244 246-297 (335)
68 PLN03178 leucoanthocyanidin di 54.5 38 0.00082 32.3 6.6 48 196-244 258-309 (360)
69 PLN02156 gibberellin 2-beta-di 52.3 1.5E+02 0.0033 27.9 10.2 48 196-244 228-279 (335)
70 PF11403 Yeast_MT: Yeast metal 48.2 7.7 0.00017 23.9 0.5 15 269-294 11-25 (40)
71 COG3491 PcbC Isopenicillin N s 46.2 83 0.0018 29.6 7.1 89 119-242 173-271 (322)
72 PRK09553 tauD taurine dioxygen 37.7 24 0.00053 32.1 2.3 34 134-173 95-128 (277)
73 PLN03002 oxidoreductase, 2OG-F 36.4 1.2E+02 0.0027 28.4 6.9 91 121-243 183-284 (332)
74 KOG1971 Lysyl hydroxylase [Pos 31.8 40 0.00087 32.8 2.7 78 150-244 280-357 (415)
75 PF08562 Crisp: Crisp; InterP 27.1 24 0.00051 24.4 0.3 29 258-294 21-49 (55)
76 COG4902 Uncharacterized protei 25.4 1.3E+02 0.0029 25.1 4.4 54 5-65 5-60 (189)
77 TIGR02410 carnitine_TMLD trime 24.9 87 0.0019 29.8 3.8 39 195-242 311-349 (362)
78 PF07894 DUF1669: Protein of u 24.6 86 0.0019 29.1 3.5 19 47-65 47-65 (284)
79 PF07350 DUF1479: Protein of u 24.5 46 0.00099 32.6 1.8 41 196-245 318-359 (416)
80 PF08686 PLAC: PLAC (protease 24.0 44 0.00095 20.6 1.0 32 255-294 1-33 (34)
81 PF00642 zf-CCCH: Zinc finger 24.0 52 0.0011 18.8 1.3 16 260-275 3-18 (27)
82 PF05906 DUF865: Herpesvirus-7 22.6 62 0.0013 19.4 1.4 15 196-210 16-32 (35)
83 PLN03207 stomagen; Provisional 22.5 66 0.0014 24.9 1.9 17 2-18 7-23 (113)
84 cd00250 CAS_like Clavaminic ac 22.2 99 0.0022 27.6 3.5 37 131-173 94-130 (262)
85 PRK09965 3-phenylpropionate di 21.9 1.3E+02 0.0028 23.0 3.6 49 155-232 4-52 (106)
86 TIGR02409 carnitine_bodg gamma 21.3 1.2E+02 0.0025 28.9 3.8 39 196-242 313-353 (366)
87 PF01448 ELM2: ELM2 domain; I 21.2 1.5E+02 0.0033 19.8 3.4 44 17-65 8-53 (55)
No 1
>PLN00052 prolyl 4-hydroxylase; Provisional
Probab=100.00 E-value=9.4e-80 Score=567.22 Aligned_cols=269 Identities=61% Similarity=1.127 Sum_probs=247.7
Q ss_pred CCCcccCCceeEEeecCCcEEEEcCCCCHHHHHHHHHHHhcccccceeeeCCCCcccccccccccccccCCCchHHHHHH
Q 022502 25 SSTAIINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGI 104 (296)
Q Consensus 25 ~~~~~~~p~kve~ls~~P~i~ii~nfLs~~Ec~~li~~a~~~~~~s~v~~~~~g~~~~~~~R~s~~~~l~~~~d~v~~~i 104 (296)
.++..++|.|||+||++|+|++|+||||++||++||+++++++++|+++++.+|+...+++|+|.++|++..+++++++|
T Consensus 37 ~~~~~~~~~kve~lS~~P~i~~~~nfLs~~Ecd~Li~la~~~l~~S~v~~~~~g~~~~s~~RTS~~~~l~~~~dpvv~~I 116 (310)
T PLN00052 37 AAAPPFNASRVKAVSWQPRIFVYKGFLSDAECDHLVKLAKKKIQRSMVADNKSGKSVMSEVRTSSGMFLDKRQDPVVSRI 116 (310)
T ss_pred cCCCCcCCceEEEecCCCCEEEECCcCCHHHHHHHHHhcccccccceeecCCCCccccCCCEEecceeecCCCCHHHHHH
Confidence 34557899999999999999999999999999999999999999999988777777788899999999998789999999
Q ss_pred HHHHHHhcCCCCCCCCcceEEeeCCCCcccccccccCCcCcccCCCceeEEEEEeecCCCCCcccccCCCCCCCCCCCCC
Q 022502 105 EDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPA 184 (296)
Q Consensus 105 ~~Ri~~~~~~p~~~~E~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~~GGeT~Fp~~~~~~~~~~~~ 184 (296)
++||++++++|..+.|++||+||++||+|++|+|++.+..+...+++|++|||+||||+++||||+||..+....+ +
T Consensus 117 ~~Ria~~t~lp~~~~E~lQVlrY~~Gq~Y~~H~D~~~~~~~~~~gg~R~aTvL~YLndv~~GGeT~FP~~~~~~~~---~ 193 (310)
T PLN00052 117 EERIAAWTFLPEENAENIQILRYEHGQKYEPHFDYFHDKINQALGGHRYATVLMYLSTVDKGGETVFPNAEGWENQ---P 193 (310)
T ss_pred HHHHHHHhCCCcccCcceEEEecCCCCCCCCCCCccccccccccCCceeEEEEEEeccCCCCCceecCCccccccc---c
Confidence 9999999999999999999999999999999999987643344578999999999999999999999997543332 4
Q ss_pred CCCcchhhhcCCeeEecccccEEEeeecCCCCCCCCCccccCCcccccceEEEEEEeeccccccccC---CccccccCcc
Q 022502 185 TNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVDSFDKIVE---EGGDCTDNNA 261 (296)
Q Consensus 185 ~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~~~~~~~~---~~~~C~d~~~ 261 (296)
+++.+++|++.+++|+|++|+||+|+|+++||++|+.++|+||||++|+||++|+|||.++++.+.. .+..|.|+++
T Consensus 194 ~~~~~s~c~~~gl~VkPkkG~ALlF~nl~~dG~~D~~SlHagcPVi~G~Kw~atkWi~~~~~~~~~~~~~~~~~C~d~~~ 273 (310)
T PLN00052 194 KDDTFSECAHKGLAVKPVKGDAVLFFSLHIDGVPDPLSLHGSCPVIEGEKWSAPKWIHIRSYEHPPVVPKDTEGCADKSA 273 (310)
T ss_pred cccchhhhhcCCeEeccCcceEEEEeccCCCCCCCcccccCCCeeecCeEEEEEEeeecccccCCCcCCccCCCCcCCcc
Confidence 5678999999999999999999999999999999999999999999999999999999999976543 4679999999
Q ss_pred ccHHHhhcCccccCcccccccccCcchhhhhcCCC
Q 022502 262 SCERWAALGECTKNPEYMVGSAQLPGFCRRSCKVC 296 (296)
Q Consensus 262 ~C~~Wa~~geC~~n~~~m~~~~~~~~~C~~sC~~C 296 (296)
+|+.||+.|||++||.||+|+++++++|+||||.|
T Consensus 274 ~C~~Wa~~GeC~~Np~yM~g~~~~~~~C~~SC~~C 308 (310)
T PLN00052 274 HCAEWAAAGECEKNPVYMVGAEGAPGNCRKSCGVC 308 (310)
T ss_pred cChhHhhCCccccChHhhcCCCCCCChhhcccccc
Confidence 99999999999999999999999999999999999
No 2
>KOG1591 consensus Prolyl 4-hydroxylase alpha subunit [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-51 Score=376.01 Aligned_cols=209 Identities=54% Similarity=0.932 Sum_probs=187.3
Q ss_pred hhccCCCCcccCCceeEEeecCCcEEEEcCCCCHHHHHHHHHHHhcccccceee-eCCCCcccccccccccccccCCCch
Q 022502 20 IRKSFSSTAIINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVA-DNLSGESKLSDVRTSSGTFIPKGKD 98 (296)
Q Consensus 20 ~~~~~~~~~~~~p~kve~ls~~P~i~ii~nfLs~~Ec~~li~~a~~~~~~s~v~-~~~~g~~~~~~~R~s~~~~l~~~~d 98 (296)
.|+..+++..++|.|+|+|||+|+|++||||||++||++|+.++++++++++|. +..+|....+.+|+|+++|+....+
T Consensus 75 ~~~~~~~~~~~ap~k~E~lsw~P~~~~yhd~ls~~e~d~l~~lak~~l~~stv~~~~~~~~~~~~~~R~S~~t~l~~~~~ 154 (289)
T KOG1591|consen 75 CRNRAGPFLRLAPVKLEELSWDPRVVLYHDFLSDEECDHLISLAKPKLERSTVVADKGTGHSTTSAVRTSSGTFLPDGAS 154 (289)
T ss_pred cccccCcceeecchhhhhcccCCceEeehhcCCHHHHHHHHHhhhhhhhceeeeccCCcccccceeeEecceeEecCCCC
Confidence 344344788999999999999999999999999999999999999999999995 4444666666789999999998789
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCcceEEeeCCCCcccccccccCC---c-CcccCCCceeEEEEEeecCCCCCcccccCCC
Q 022502 99 AIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYFSD---K-VNIVRGGHRLATVLMYLSDVAKGGETVFPNA 174 (296)
Q Consensus 99 ~v~~~i~~Ri~~~~~~p~~~~E~~qv~rY~~G~~y~~H~D~~~~---~-~~~~~~~~R~~T~liYLND~~~GGeT~Fp~~ 174 (296)
+++++|++||++++++|.++.|.+||++|+.||+|.+|+|++.. . .....+++|++|+|+||+|+++||+|+||..
T Consensus 155 ~~~~~i~~ri~~~T~l~~e~~E~lqVlnYg~Gg~Y~~H~D~~~~~~~~~~~~~~~g~RiaT~l~yls~v~~GG~TvFP~~ 234 (289)
T KOG1591|consen 155 PVVSRIEQRIADLTGLPVENGESLQVLNYGLGGHYEPHYDYFLPEEDETFNGLNGGNRIATVLMYLSDVEQGGETVFPNL 234 (289)
T ss_pred HHHHHHHHHHHhccCCCcccCccceEEEecCCccccccccccccccchhhhhcccCCcceeEEEEecccCCCCcccCCCC
Confidence 99999999999999999999999999999999999999999952 1 1234578999999999999999999999997
Q ss_pred CCCCCCCCCCCCCcchhhhcCCeeEecccccEEEeeecCCCCCCCCCccccCCcccccceEEEEEEeeccccc
Q 022502 175 EEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVDSFD 247 (296)
Q Consensus 175 ~~~~~~~~~~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~~~~ 247 (296)
. ..++|+|++|+|++|+|+++||..|++++|++|||..|+||++|+|||.+.++
T Consensus 235 ~-------------------~~~~V~PkkGdal~wfnl~~~~~~d~~S~H~~CPv~~G~kw~~~~wi~~~~~~ 288 (289)
T KOG1591|consen 235 G-------------------MKPAVKPKKGDALFWFNLHPDGEGDPRSLHGGCPVLVGSKWIATKWIHEKNQE 288 (289)
T ss_pred C-------------------CcccccCCCCCeeEEEEccCCCCCCccccccCCCeeeccceeeeeeeeecccc
Confidence 2 12499999999999999999999999999999999999999999999998753
No 3
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.
Probab=100.00 E-value=1.4e-36 Score=260.85 Aligned_cols=174 Identities=39% Similarity=0.636 Sum_probs=150.6
Q ss_pred CcEEEEcCCCCHHHHHHHHHHHhcccccceeeeCCCCcccccccccccccccCCCc-hHHHHHHHHHHHHhcCCC---CC
Q 022502 42 PRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGK-DAIIAGIEDKIATWTFLP---KE 117 (296)
Q Consensus 42 P~i~ii~nfLs~~Ec~~li~~a~~~~~~s~v~~~~~g~~~~~~~R~s~~~~l~~~~-d~v~~~i~~Ri~~~~~~p---~~ 117 (296)
|.|++++||||++||++||+++++...++.+..+..+....+++|+|..+|+...+ +++++.|++||+.+++++ ..
T Consensus 1 P~i~~~~~~ls~~ec~~li~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~l~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 80 (178)
T smart00702 1 PGVVVFHDFLSPAECQKLLEEAEPLGWRGEVTRGDTNPNHDSKYRQSNGTWLELLKGDLVIERIRQRLADFLGLLRGLPL 80 (178)
T ss_pred CcEEEECCCCCHHHHHHHHHHhhhhcccceeecCCCCccccCCCEeecceecCCCCCCHHHHHHHHHHHHHHCCCchhhc
Confidence 78999999999999999999999987788877544332256789999999998754 789999999999999988 67
Q ss_pred CCCcceEEeeCCCCcccccccccCCcCcccCCCceeEEEEEeecCCCCCcccccCCCCCCCCCCCCCCCCcchhhhcCCe
Q 022502 118 NGEDIQVLRYEHGQKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAKKGI 197 (296)
Q Consensus 118 ~~E~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~c~~~~~ 197 (296)
..+.+|+++|.+|++|.+|+|...... .++|.+|+++||||+++||+|.||..+. ....
T Consensus 81 ~~~~~~~~~Y~~g~~~~~H~D~~~~~~----~~~r~~T~~~yLn~~~~GG~~~f~~~~~-----------------~~~~ 139 (178)
T smart00702 81 SAEDAQVARYGPGGHYGPHVDNFEDDE----NGDRIATFLLYLNDVEEGGELVFPGLGL-----------------MVCA 139 (178)
T ss_pred cCcceEEEEECCCCcccCcCCCCCCCC----CCCeEEEEEEEeccCCcCceEEecCCCC-----------------ccce
Confidence 899999999999999999999986431 2589999999999999999999998631 0256
Q ss_pred eEecccccEEEeeecCCCCCCCCCccccCCcccccceEEEEEEee
Q 022502 198 AVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIH 242 (296)
Q Consensus 198 ~V~P~~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~ 242 (296)
.|+|++|++|+|++.. +.++|+++||++|+||++++|+|
T Consensus 140 ~v~P~~G~~v~f~~~~------~~~~H~v~pv~~G~r~~~~~W~~ 178 (178)
T smart00702 140 TVKPKKGDLLFFPSGR------GRSLHGVCPVTRGSRWAITGWIR 178 (178)
T ss_pred EEeCCCCcEEEEeCCC------CCccccCCcceeCCEEEEEEEEC
Confidence 9999999999998742 37999999999999999999996
No 4
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional
Probab=99.96 E-value=9.4e-29 Score=218.85 Aligned_cols=168 Identities=23% Similarity=0.259 Sum_probs=128.8
Q ss_pred EEEEcCCCCHHHHHHHHHHHhc-ccccceeeeCCCCcccccccccccccccCCCchHHHHHHHHHHHHhc---------C
Q 022502 44 AFVYEGFLTDLECDHLINLAKS-QLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWT---------F 113 (296)
Q Consensus 44 i~ii~nfLs~~Ec~~li~~a~~-~~~~s~v~~~~~g~~~~~~~R~s~~~~l~~~~d~v~~~i~~Ri~~~~---------~ 113 (296)
|++|+|+||++||+++++..+. .+.+..+.. | ...+++|++..+-. ++++++.|.++|.... .
T Consensus 2 i~~I~~vLs~eec~~~~~~le~~~~~dg~~ta---G-~~~~~vKnN~ql~~---d~~~a~~l~~~i~~~L~~~~l~~sa~ 74 (226)
T PRK05467 2 LLHIPDVLSPEEVAQIRELLDAAEWVDGRVTA---G-AQAAQVKNNQQLPE---DSPLARELGNLILDALTRNPLFFSAA 74 (226)
T ss_pred eeeecccCCHHHHHHHHHHHHhcCCccCCcCc---C-ccchhcccccccCC---CCHHHHHHHHHHHHHHhcCchhhhhc
Confidence 7899999999999999999876 465554432 2 23567888776643 3567777777776542 3
Q ss_pred CCCCCCCcceEEeeCCCCcccccccccCCcCc-ccCCCceeEEEEEeecCCC--CCcccccCCCCCCCCCCCCCCCCcch
Q 022502 114 LPKENGEDIQVLRYEHGQKYEPHYDYFSDKVN-IVRGGHRLATVLMYLSDVA--KGGETVFPNAEEPPRRRTPATNDDLS 190 (296)
Q Consensus 114 ~p~~~~E~~qv~rY~~G~~y~~H~D~~~~~~~-~~~~~~R~~T~liYLND~~--~GGeT~Fp~~~~~~~~~~~~~~~~~~ 190 (296)
+|.. ..+++|.||.+|++|++|+|+...... .....+|.+|+++||||++ +||||+|+...
T Consensus 75 lp~~-i~~~~f~rY~~G~~y~~H~D~~~~~~~~~~~~~rs~lS~~lyLnd~~~yeGGEl~~~~~~--------------- 138 (226)
T PRK05467 75 LPRK-IHPPLFNRYEGGMSYGFHVDNAVRSLPGTGGRVRTDLSATLFLSDPDDYDGGELVIEDTY--------------- 138 (226)
T ss_pred cccc-cccceEEEECCCCccCccccCCcccCCCCCcceeEEEEEEEEeCCCCCCcCCceEEecCC---------------
Confidence 3433 357899999999999999999865321 1112356899999999874 89999998742
Q ss_pred hhhcCCeeEecccccEEEeeecCCCCCCCCCccccCCcccccceEEEEEEeeccccc
Q 022502 191 ECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVDSFD 247 (296)
Q Consensus 191 ~c~~~~~~V~P~~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~~~~ 247 (296)
+...|+|++|++|+|++ .++|+|+||++|+||+++.|++..=.+
T Consensus 139 ----g~~~Vkp~aG~~vlfps---------~~lH~v~pVt~G~R~~~~~Wi~S~v~~ 182 (226)
T PRK05467 139 ----GEHRVKLPAGDLVLYPS---------TSLHRVTPVTRGVRVASFFWIQSLVRD 182 (226)
T ss_pred ----CcEEEecCCCeEEEECC---------CCceeeeeccCccEEEEEecHHHHcCC
Confidence 25789999999999986 699999999999999999999765443
No 5
>PHA02813 hypothetical protein; Provisional
Probab=99.75 E-value=6.9e-18 Score=155.47 Aligned_cols=137 Identities=23% Similarity=0.244 Sum_probs=106.2
Q ss_pred ccccceeeeCCCC-cccccccccccccccCCCchHHHHHHHHHHHHh-----cCCC----CCCCCcceEEeeCCCCcccc
Q 022502 66 QLKRSAVADNLSG-ESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATW-----TFLP----KENGEDIQVLRYEHGQKYEP 135 (296)
Q Consensus 66 ~~~~s~v~~~~~g-~~~~~~~R~s~~~~l~~~~d~v~~~i~~Ri~~~-----~~~p----~~~~E~~qv~rY~~G~~y~~ 135 (296)
.+.+|.+.+..+| +....++|+++++.++.. +.|++||+.+ .+.+ ++.+|.++++||.+|++|++
T Consensus 35 ~~~~s~i~~~~~~ge~l~~~iRnNkrviid~~-----~~L~erIr~~Lp~~l~~~~lv~~V~vnerirfyrY~kGq~F~~ 109 (354)
T PHA02813 35 IWEESKVFDHEKGGEVINTNERQCKQYIIRGL-----DDIFKVIRKKLLLSFEFPQKISDIILDNTITLIKYEKGDFFNN 109 (354)
T ss_pred CccccceeccccCceEEccccccceEEEEcCH-----HHHHHHHHHhhHHHhcCCccceeEEEcceEEEEEECCCcccCc
Confidence 5788888875544 556788999999998742 4555555443 2333 46789999999999999999
Q ss_pred cccccCCcCcccCCCceeEEEEEeecCCCCCcccccCCCCCCCCCCCCCCCCcchhhhcCCeeEecccccEEEeeecCCC
Q 022502 136 HYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTN 215 (296)
Q Consensus 136 H~D~~~~~~~~~~~~~R~~T~liYLND~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~ 215 (296)
|.|+..... .....+|+|+|||++++||||.|...+ .-.|. .|++|+|.
T Consensus 110 H~Dg~~~r~----k~~s~~tLLLYLN~~~~GGeT~f~~~~--------------------~tsI~--~g~dlLFd----- 158 (354)
T PHA02813 110 HRDFIHFKS----KNCYCYHLVLYLNNTSKGGNTNIHIKD--------------------NTIFS--TKNDVLFD----- 158 (354)
T ss_pred ccCCceeec----CCceEEEEEEEEeccCCCCceEEEcCC--------------------CceEe--ecceEEEe-----
Confidence 999876431 123899999999999999999998742 12455 99999994
Q ss_pred CCCCCCccccCCcccccceEEEEEEee
Q 022502 216 AIPDPVSLHSGCPVIEGEKWSATKWIH 242 (296)
Q Consensus 216 g~~D~~~lH~g~PV~~G~K~i~~~Wi~ 242 (296)
+...|+|.+|.+|.||+|..=+-
T Consensus 159 ----h~l~Heg~~V~sG~KyVa~~~V~ 181 (354)
T PHA02813 159 ----KTLNHSSDIITDGEKNIALINVV 181 (354)
T ss_pred ----cccccCCcEeccCeEEEEEEEEE
Confidence 68999999999999998866543
No 6
>PHA02869 C4L/C10L-like gene family protein; Provisional
Probab=99.75 E-value=6.4e-18 Score=157.60 Aligned_cols=140 Identities=20% Similarity=0.223 Sum_probs=112.0
Q ss_pred cccceeeeCCCC-cccccccccccccccCCCchHHHHHHHHHHHHh-----cCC--CCCCCCcceEEeeCCCCccccccc
Q 022502 67 LKRSAVADNLSG-ESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATW-----TFL--PKENGEDIQVLRYEHGQKYEPHYD 138 (296)
Q Consensus 67 ~~~s~v~~~~~g-~~~~~~~R~s~~~~l~~~~d~v~~~i~~Ri~~~-----~~~--p~~~~E~~qv~rY~~G~~y~~H~D 138 (296)
+.+|.+.+..+| +......|.|+++.+. +.+.+.|++||+.+ .+. .++.+|.++++||.+||+|++|.|
T Consensus 45 ~~~s~i~~~~~g~e~~~~~~~ksKqii~e---~~La~~L~erlr~lLp~~lk~~v~~V~lnerirfyrY~kGq~F~~H~D 121 (418)
T PHA02869 45 CEDSKIFFPEKRTELLSIKDRKSKQIVFE---NSLNDDLLKKLHALIYDELSTVVDSVTVENTVTLIMYEKGDYFARHRD 121 (418)
T ss_pred cccceeeccccCceeEeeccccceeEEec---hHHHHHHHHHHHHhhhHHhhCccceEEEcceEEEEEECCCCccccccc
Confidence 578888876666 3345567899888775 45677777777664 232 456789999999999999999999
Q ss_pred ccCCcCcccCCCceeEEEEEeecCCCCCcccccCCCCCCCCCCCCCCCCcchhhhcCCeeEecccccEEEeeecCCCCCC
Q 022502 139 YFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIP 218 (296)
Q Consensus 139 ~~~~~~~~~~~~~R~~T~liYLND~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~ 218 (296)
+.... .+....+|+|+|||++++||||.|.... ...|+|++| |+|
T Consensus 122 g~~~r----s~e~s~~tLLLYLNd~~~GGET~f~~~~--------------------~~sI~pksg--LLF--------- 166 (418)
T PHA02869 122 FSTVF----SKNIICVHLLLYLEQPETGGETVIYIDN--------------------NTSVKLKTD--HLF--------- 166 (418)
T ss_pred Cceec----CCCEEEEEEEEEEeccCCCCceEEEeCC--------------------CceEecCCC--eEe---------
Confidence 87643 2456789999999999999999999732 577999999 888
Q ss_pred CCCccccCCcccccceEEEEEEeecc
Q 022502 219 DPVSLHSGCPVIEGEKWSATKWIHVD 244 (296)
Q Consensus 219 D~~~lH~g~PV~~G~K~i~~~Wi~~~ 244 (296)
++...|+|.+|.+|.||+|..-+..+
T Consensus 167 dh~l~Heg~~V~sG~KyVartDVmyr 192 (418)
T PHA02869 167 DKTIEHESITVESGRKCVALFDVLLE 192 (418)
T ss_pred ccccccCCcEeecCeEEEEEEEEEEE
Confidence 46899999999999999999877543
No 7
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A ....
Probab=99.65 E-value=1.8e-16 Score=123.17 Aligned_cols=91 Identities=37% Similarity=0.590 Sum_probs=69.8
Q ss_pred ceEEeeCCCCcccccccccCCcCcccCCCceeEEEEEeecCCC---CCcccccCCCCCCCCCCCCCCCCcchhhhcCCee
Q 022502 122 IQVLRYEHGQKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVA---KGGETVFPNAEEPPRRRTPATNDDLSECAKKGIA 198 (296)
Q Consensus 122 ~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~---~GGeT~Fp~~~~~~~~~~~~~~~~~~~c~~~~~~ 198 (296)
+|+.+|.+|++|+||.|... ...+.+|+|+|||+++ +||+|+|.... ... . ....
T Consensus 1 ~~~~~y~~G~~~~~H~D~~~-------~~~~~~t~llyL~~~~~~~~GG~l~~~~~~-~~~-------~-------~~~~ 58 (100)
T PF13640_consen 1 MQLNRYPPGGFFGPHTDNSY-------DPHRRVTLLLYLNDPEWEFEGGELEFYPSK-DSD-------D-------VSRE 58 (100)
T ss_dssp -EEEEEETTEEEEEEESSSC-------CCSEEEEEEEESS-CS-HCEE--EEETTTS--TS-------S-------TCEE
T ss_pred CEEEEECcCCEEeeeECCCC-------CCcceEEEEEEECCCCcccCCCEEEEeccc-cCC-------C-------cceE
Confidence 58999999999999999854 2579999999999887 99999998642 000 0 1233
Q ss_pred E-----ecccccEEEeeecCCCCCCCCCccccCCcc-cccceEEEEEEee
Q 022502 199 V-----KPRRGDALLFFSLHTNAIPDPVSLHSGCPV-IEGEKWSATKWIH 242 (296)
Q Consensus 199 V-----~P~~G~alvF~n~~~~g~~D~~~lH~g~PV-~~G~K~i~~~Wi~ 242 (296)
+ +|+.|++|+|.+ ..++|++.|| ..|.|++++.|++
T Consensus 59 ~~~~~~~p~~g~~v~F~~--------~~~~H~v~~v~~~~~R~~l~~~~~ 100 (100)
T PF13640_consen 59 VEDFDIVPKPGRLVIFPS--------DNSLHGVTPVGEGGRRYSLTFWFH 100 (100)
T ss_dssp EGGGSEE-BTTEEEEEES--------CTCEEEEEEE-EESEEEEEEEEEE
T ss_pred EEeccccCCCCEEEEEeC--------CCCeecCcccCCCCCEEEEEEEEC
Confidence 3 399999999986 3799999999 8999999999986
No 8
>COG3128 PiuC Uncharacterized iron-regulated protein [Function unknown]
Probab=99.61 E-value=2.6e-15 Score=126.73 Aligned_cols=169 Identities=21% Similarity=0.265 Sum_probs=115.3
Q ss_pred CcEEEEcCCCCHHHHHHHHHHHhc-ccccceeeeCCCCcccccccccccccccCCCchHHHHHHHHHH----HH---hc-
Q 022502 42 PRAFVYEGFLTDLECDHLINLAKS-QLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKI----AT---WT- 112 (296)
Q Consensus 42 P~i~ii~nfLs~~Ec~~li~~a~~-~~~~s~v~~~~~g~~~~~~~R~s~~~~l~~~~d~v~~~i~~Ri----~~---~~- 112 (296)
+..+.|+.+||+++|.+|.+..+. .+....+.. | ..-..+|++..+-.+ .+..+.+.+-| .+ +.
T Consensus 2 ~m~lhIp~VLs~a~va~iRa~l~~A~w~dGrat~---g-~q~a~vk~n~qlp~~---s~l~~~vg~~il~al~~~plff~ 74 (229)
T COG3128 2 IMMLHIPEVLSEAQVARIRAALEQAEWVDGRATQ---G-PQGAQVKNNLQLPQD---SALARELGNEILQALTAHPLFFA 74 (229)
T ss_pred ceEEechhhCCHHHHHHHHHHHhhcccccccccc---C-cchhhhhccccCCcc---cHHHHHHHHHHHHHHHhchhHHH
Confidence 346779999999999999988764 343333321 1 122344555443322 33433333322 22 11
Q ss_pred -CCCCCCCCcceEEeeCCCCcccccccccCCcCcccCC--CceeEEEEEeecCCC--CCcccccCCCCCCCCCCCCCCCC
Q 022502 113 -FLPKENGEDIQVLRYEHGQKYEPHYDYFSDKVNIVRG--GHRLATVLMYLSDVA--KGGETVFPNAEEPPRRRTPATND 187 (296)
Q Consensus 113 -~~p~~~~E~~qv~rY~~G~~y~~H~D~~~~~~~~~~~--~~R~~T~liYLND~~--~GGeT~Fp~~~~~~~~~~~~~~~ 187 (296)
-+|. ..++.+|.+|..|.+|.+|+|+.....+...+ -...++..++|+|++ +|||++..+..
T Consensus 75 aALp~-t~~~P~Fn~Y~eg~~f~fHvDgavr~~hp~~~~~lrtdls~tlfl~DPedYdGGeLVv~dtY------------ 141 (229)
T COG3128 75 AALPR-TCLPPLFNRYQEGDFFGFHVDGAVRSIHPGSGFRLRTDLSCTLFLSDPEDYDGGELVVNDTY------------ 141 (229)
T ss_pred hhccc-ccCCchhhhccCCCcccccccCcccccCCCCCceeEeeeeeeeecCCccccCCceEEEeccc------------
Confidence 2332 45789999999999999999997653121111 123567789999986 79999987643
Q ss_pred cchhhhcCCeeEecccccEEEeeecCCCCCCCCCccccCCcccccceEEEEEEeecccc
Q 022502 188 DLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVDSF 246 (296)
Q Consensus 188 ~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~~~ 246 (296)
+...||-.+|++|+|++ .++|++.||++|+++....|+..--+
T Consensus 142 -------g~h~VklPAGdLVlypS---------tSlH~VtPVTRg~R~asffW~qslir 184 (229)
T COG3128 142 -------GNHRVKLPAGDLVLYPS---------TSLHEVTPVTRGERFASFFWIQSLIR 184 (229)
T ss_pred -------cceEEeccCCCEEEccc---------ccceeccccccCceEEEeeehHHHhh
Confidence 26889999999999997 79999999999999999999975433
No 9
>smart00254 ShKT ShK toxin domain. ShK toxin domain
Probab=99.07 E-value=3.4e-11 Score=74.91 Aligned_cols=33 Identities=42% Similarity=1.112 Sum_probs=31.8
Q ss_pred cccCccccHHHhhcCccccCcccccccccCcchhhhhcCCC
Q 022502 256 CTDNNASCERWAALGECTKNPEYMVGSAQLPGFCRRSCKVC 296 (296)
Q Consensus 256 C~d~~~~C~~Wa~~geC~~n~~~m~~~~~~~~~C~~sC~~C 296 (296)
|.|.+..|+.|| .|+| +||.||. .+|+||||+|
T Consensus 1 C~D~~~~C~~wa-~~~C-~~~~~~~------~~C~ktCg~C 33 (33)
T smart00254 1 CVDRHPDCAAWA-KGFC-TNPFYMK------SNCPKTCGFC 33 (33)
T ss_pred CCCCcccCcchh-hCcC-CChhHHH------hhhhhhcccC
Confidence 889999999999 9999 8899999 9999999998
No 10
>KOG3710 consensus EGL-Nine (EGLN) protein [Signal transduction mechanisms]
Probab=99.05 E-value=2.7e-09 Score=93.12 Aligned_cols=164 Identities=20% Similarity=0.342 Sum_probs=112.9
Q ss_pred cEEEEcCCCCHHHHHHHHHHHhc-----ccccceeeeCCCCcccccccccccccccCCCch-------------HHHHHH
Q 022502 43 RAFVYEGFLTDLECDHLINLAKS-----QLKRSAVADNLSGESKLSDVRTSSGTFIPKGKD-------------AIIAGI 104 (296)
Q Consensus 43 ~i~ii~nfLs~~Ec~~li~~a~~-----~~~~s~v~~~~~g~~~~~~~R~s~~~~l~~~~d-------------~v~~~i 104 (296)
.+.+++|||-.+-=..+.+..+. .+.+..++.++.. ..+++|..+..|+...+. +++...
T Consensus 54 g~~vvd~flg~~~g~~v~~ev~~l~~~G~f~dgql~~~~~~--~~k~iRgd~i~wi~G~e~gc~~i~~L~s~~d~~i~h~ 131 (280)
T KOG3710|consen 54 GICVVDNFLGSETGKFILKEVEALYETGAFRDGQLVSPDAF--HSKDIRGDKITWVGGNEPGCETIMLLPSPIDSVILHC 131 (280)
T ss_pred ceEEEechhhHHHHHHHHHHHHHHHhccCccCceeccCcCC--cchhhccCCceEecCCCCCccceeeecccchhhhhhh
Confidence 47889999998877766666654 3455555543222 345899999999985431 111111
Q ss_pred HHHHHHhcCCCCCCCCcceEEeeC-CCCcccccccccCCcCcccCCCceeEEEEEeecC---CC-CCcc-cccCCCCCCC
Q 022502 105 EDKIATWTFLPKENGEDIQVLRYE-HGQKYEPHYDYFSDKVNIVRGGHRLATVLMYLSD---VA-KGGE-TVFPNAEEPP 178 (296)
Q Consensus 105 ~~Ri~~~~~~p~~~~E~~qv~rY~-~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND---~~-~GGe-T~Fp~~~~~~ 178 (296)
..|+-.. ...-..-.|..|. .|-.|-.|+|+.. +..|-+|.+.|||. +. .||- -.||.....
T Consensus 132 ~~r~~~~----~~gRtkAMVAcYPGNGtgYVrHVDNP~-------gDGRcITcIYYlNqNWD~kv~Gg~Lri~pe~~~~- 199 (280)
T KOG3710|consen 132 NGRLGSY----IIGRTKAMVACYPGNGTGYVRHVDNPH-------GDGRCITCIYYLNQNWDVKVHGGILRIFPEGSTT- 199 (280)
T ss_pred ccccccc----cccceeEEEEEecCCCceeeEeccCCC-------CCceEEEEEEEcccCcceeeccceeEeccCCCCc-
Confidence 1111110 1113456688998 5778999999854 45799999999994 43 4555 468875321
Q ss_pred CCCCCCCCCcchhhhcCCeeEecccccEEEeeecCCCCCCCCCccccCCcccccceEEEEEEeeccc
Q 022502 179 RRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVDS 245 (296)
Q Consensus 179 ~~~~~~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~~ 245 (296)
-..|.|+-+++||||| |.+-.|++.|+.. .||.+|.|+-...
T Consensus 200 -----------------~adieP~fdrLlffwS-------drrnPhev~Pa~~-tryaitvwyfda~ 241 (280)
T KOG3710|consen 200 -----------------FADIEPKFDRLLFFWS-------DRRNPHEVQPAYA-TRYAITVWYFDAK 241 (280)
T ss_pred -----------------ccccCcCCCeEEEEEe-------cCCCccccccccc-cceEEEEEEeccc
Confidence 4679999999999998 6788999999997 6999999986543
No 11
>PF01549 ShK: ShK domain-like; InterPro: IPR003582 The ShK toxin domain is found in metridin, a toxin from Metridium senile (brown sea anemone) and in ShK, a structurally defined polypeptide from the sea anemone Stoichactis helianthus (Stichodactyla helianthus) (Caribbean sea anemone). ShK is a powerful inhibitor of T lymphocyte voltage-gated potassium channels, in particular Kv1.3 []. It has been proposed that structural analogues may have use as an immunosuppressants for the prevention of graft rejection and for the treatment of autoimmune diseases []. The ShK toxin domain, is also found in one or more copies as a C-terminal domain in the metallopeptidases of Caenorhabditis elegans. The metallopeptidases belonging to MEROPS peptidase families: M10A, M12A and M14A. The majority belonging to M12A, the astacin/adamalysin family of metallopeptidases.; PDB: 1BGK_A 2K72_A.
Probab=98.77 E-value=1.4e-09 Score=69.52 Aligned_cols=36 Identities=36% Similarity=0.963 Sum_probs=29.2
Q ss_pred ccccCccccHHHhhcCccccCc--ccccccccCcchhhhhcCCC
Q 022502 255 DCTDNNASCERWAALGECTKNP--EYMVGSAQLPGFCRRSCKVC 296 (296)
Q Consensus 255 ~C~d~~~~C~~Wa~~geC~~n~--~~m~~~~~~~~~C~~sC~~C 296 (296)
.|.|.++.|+.|+..|+|.++. .||. .+|++|||+|
T Consensus 1 ~C~D~~~~C~~~~~~g~C~~~~~~~~m~------~~C~~tCg~C 38 (38)
T PF01549_consen 1 NCRDKNPNCATWANNGFCTNPFYQDFMR------KNCPKTCGFC 38 (38)
T ss_dssp ---S-HCHHHHHHCCTTTTTSH--HHHH------CCTTTTTT--
T ss_pred CCCCchhhhhhhhhhhhhcccccchhhh------chhcccCcCC
Confidence 4899999999999999999998 9999 9999999998
No 12
>PF13661 2OG-FeII_Oxy_4: 2OG-Fe(II) oxygenase superfamily
Probab=98.60 E-value=5.4e-08 Score=70.95 Aligned_cols=52 Identities=29% Similarity=0.511 Sum_probs=43.4
Q ss_pred CCcceEEeeCCCCcccccccccCCcCcccCCCceeEEEEEeec----CCCCCcccccCCC
Q 022502 119 GEDIQVLRYEHGQKYEPHYDYFSDKVNIVRGGHRLATVLMYLS----DVAKGGETVFPNA 174 (296)
Q Consensus 119 ~E~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLN----D~~~GGeT~Fp~~ 174 (296)
.+.+++.+|..|++|++|+|..... .+.+|.+|+||||| +..+||++.|...
T Consensus 10 ~~~~~~~~~~~g~~~~~H~D~~~~~----~~~~r~~t~llYLn~~w~~d~~Gg~~~f~~~ 65 (70)
T PF13661_consen 10 RPNFRFYRYRRGDFFGWHVDADPSS----SGKRRFLTLLLYLNEDWDEDFGGGELFFDDD 65 (70)
T ss_pred CcceeEEEcCCCCEeeeeEcCCccc----cccceeEEEEEEecccccCccCCcEEEEeCC
Confidence 4678999999999999999997653 15789999999999 4457888888875
No 13
>PF03336 Pox_C4_C10: Poxvirus C4/C10 protein; InterPro: IPR005004 This is a family of proteins expressed by members of the Poxviridae.
Probab=98.58 E-value=3e-07 Score=85.17 Aligned_cols=127 Identities=20% Similarity=0.271 Sum_probs=90.7
Q ss_pred ccccccccccCC-CchHHHHHHHHHHHHhc-C--CCCCCCCcceEEeeCCCCcccccccccCCcCcccCCCceeEEEEEe
Q 022502 84 DVRTSSGTFIPK-GKDAIIAGIEDKIATWT-F--LPKENGEDIQVLRYEHGQKYEPHYDYFSDKVNIVRGGHRLATVLMY 159 (296)
Q Consensus 84 ~~R~s~~~~l~~-~~d~v~~~i~~Ri~~~~-~--~p~~~~E~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liY 159 (296)
..|.|..+.+.. ..+++.+.|++-|..-. . -.+...+.+.+++|++|++|+.|.|..... .....-.++++|
T Consensus 39 ~~r~sk~iv~~~~~~~dI~~~ik~~l~~~lk~~v~~V~V~n~iTfikY~kGd~f~~~~d~~~~~----~~n~~~y~LvLy 114 (339)
T PF03336_consen 39 EFRKSKQIVIEDSLNDDIFSKIKNLLYDELKNVVEDVIVDNTITFIKYEKGDFFDNHRDFIKRD----SKNCLEYHLVLY 114 (339)
T ss_pred cccccceEEEeccchHHHHHHHHHHHHHHhhcceeEEEEcceEEEEEEccCcchhhhcccceec----cCCceEEEEEEE
Confidence 378888876662 24678888777665422 2 123456789999999999999999954321 235678999999
Q ss_pred ecCCCCCcccccCCCCCCCCCCCCCCCCcchhhhcCCeeEecccccEEEeeecCCCCCCCCCccccCCcccccceEEEEE
Q 022502 160 LSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATK 239 (296)
Q Consensus 160 LND~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~ 239 (296)
|+.+++||+|.+.-.+.. .-.+++ ++-|+| |....|++.+|.+|.|++|..
T Consensus 115 L~~~~~GGktkiyi~~~~------------------~tvI~~--~~DvLF---------dKsl~h~s~~V~~G~K~VAl~ 165 (339)
T PF03336_consen 115 LNNPENGGKTKIYIDPND------------------NTVIST--SEDVLF---------DKSLNHESIIVEEGRKIVALF 165 (339)
T ss_pred EeccCCCceEEEEECCCC------------------ceeeec--cccEEE---------eccccccceEeccCeEEEEEE
Confidence 999999999997632111 212433 667788 468999999999999999765
Q ss_pred Eeec
Q 022502 240 WIHV 243 (296)
Q Consensus 240 Wi~~ 243 (296)
=+-.
T Consensus 166 dV~i 169 (339)
T PF03336_consen 166 DVII 169 (339)
T ss_pred EEEE
Confidence 5433
No 14
>COG3751 EGL-9 Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones]
Probab=98.47 E-value=1.9e-06 Score=77.44 Aligned_cols=101 Identities=26% Similarity=0.289 Sum_probs=76.7
Q ss_pred cceEEeeCCCCcccccccccCCcCcccCCCceeEEEEEeecCC---CCCccc-ccCCCCCCCCCCCCCCCCcchhhhcCC
Q 022502 121 DIQVLRYEHGQKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDV---AKGGET-VFPNAEEPPRRRTPATNDDLSECAKKG 196 (296)
Q Consensus 121 ~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~---~~GGeT-~Fp~~~~~~~~~~~~~~~~~~~c~~~~ 196 (296)
..|+.-|.+|.+|..|-|.+.+ ...|.+|.++|+|.. +.|||. .|+....... -+..-
T Consensus 137 e~~~~~y~~G~~l~~H~D~~~~------~~~R~~~yv~y~~r~wkpe~GGeL~l~~s~~~~~~------------~~~~~ 198 (252)
T COG3751 137 EGQITVYNPGCFLLKHDDNGRD------KDIRLATYVYYLTREWKPEYGGELRLFHSLQKNNT------------AADSF 198 (252)
T ss_pred eeeeeEecCCceeEeecccCCC------ccceEEEEEeccCCCCCcCCCCceeeccccccccc------------ccccc
Confidence 5899999999999999999864 357999999999974 689999 6776421000 00124
Q ss_pred eeEecccccEEEeeecCCCCCCCCCccccCCccc-ccceEEEEEEeeccc
Q 022502 197 IAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVI-EGEKWSATKWIHVDS 245 (296)
Q Consensus 197 ~~V~P~~G~alvF~n~~~~g~~D~~~lH~g~PV~-~G~K~i~~~Wi~~~~ 245 (296)
.++.|+-+.+++|-+-. ..+.|.+.+|. .+.|.+++.|++...
T Consensus 199 ~ti~P~fn~lv~F~s~~------~Hs~h~V~~~~~~~~RlsV~GW~r~~~ 242 (252)
T COG3751 199 KTIAPVFNSLVFFKSRP------SHSVHSVEEPYAAADRLSVTGWFRRPG 242 (252)
T ss_pred cccCCCCceEEEEEecC------CccceeccccccccceEEEeeEEecCC
Confidence 68999999999997632 23788888854 468999999998664
No 15
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit. The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=98.41 E-value=1.9e-07 Score=71.91 Aligned_cols=90 Identities=26% Similarity=0.363 Sum_probs=56.6
Q ss_pred CcceEEeeC---CCCcccccccccCCcCcccCCCceeEEEEEeecCCCCCcccccCCCCCCCCCCCCCCCCcchhhhcCC
Q 022502 120 EDIQVLRYE---HGQKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAKKG 196 (296)
Q Consensus 120 E~~qv~rY~---~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~c~~~~ 196 (296)
+.+++++|. .+..+.+|.|.. .+.+|++++ +++|++.|...+ ..
T Consensus 2 ~~~~~~~Y~~~~~~~~~~~H~D~~----------~~~~Til~~----~~~~gL~~~~~~-------------------~~ 48 (98)
T PF03171_consen 2 SQLRLNRYPPPENGVGIGPHTDDE----------DGLLTILFQ----DEVGGLQVRDDG-------------------EW 48 (98)
T ss_dssp -EEEEEEE-SCCGCEEEEEEEES------------SSEEEEEE----TSTS-EEEEETT-------------------EE
T ss_pred CEEEEEECCCcccCCceeCCCcCC----------CCeEEEEec----ccchheeccccc-------------------cc
Confidence 468999999 889999999973 478999999 678888888642 14
Q ss_pred eeEecccccEEEeeec-C--CCCCCCCCccccCCcccccceEEEEEEee
Q 022502 197 IAVKPRRGDALLFFSL-H--TNAIPDPVSLHSGCPVIEGEKWSATKWIH 242 (296)
Q Consensus 197 ~~V~P~~G~alvF~n~-~--~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~ 242 (296)
+.|.|..+.+++..-. . -.+......+|+++++.+|.|++++.|++
T Consensus 49 ~~v~~~~~~~~v~~G~~l~~~t~g~~~~~~HrV~~~~~~~R~s~~~f~~ 97 (98)
T PF03171_consen 49 VDVPPPPGGFIVNFGDALEILTNGRYPATLHRVVPPTEGERYSLTFFLR 97 (98)
T ss_dssp EE----TTCEEEEEBHHHHHHTTTSS----EEEE--STS-EEEEEEEEE
T ss_pred cCccCccceeeeeceeeeecccCCccCCceeeeEcCCCCCEEEEEEEEC
Confidence 6677777665555421 1 12334678999999999999999999985
No 16
>PHA02866 Hypothetical protein; Provisional
Probab=98.29 E-value=3.1e-06 Score=76.85 Aligned_cols=136 Identities=16% Similarity=0.220 Sum_probs=93.7
Q ss_pred cccccceeeeCCCC-cccccccccccccccCCCchHHHHHHHHHHHHhcC--CCCCCCCcceEEeeCCCCcccccccccC
Q 022502 65 SQLKRSAVADNLSG-ESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTF--LPKENGEDIQVLRYEHGQKYEPHYDYFS 141 (296)
Q Consensus 65 ~~~~~s~v~~~~~g-~~~~~~~R~s~~~~l~~~~d~v~~~i~~Ri~~~~~--~p~~~~E~~qv~rY~~G~~y~~H~D~~~ 141 (296)
..|.+|.+.+...| +......|.|.++ +++..++. |+.++.. ..+...+.+.+.+|..|.+|.-|.|-..
T Consensus 30 ~~w~~s~i~~~~~~i~~~~~~~~k~k~~------~~v~~~v~-~~~~~~~~~~dv~v~~~~t~vk~~kg~~fdn~~~~~~ 102 (333)
T PHA02866 30 NSWEDSDILRHRQFIPCEILVLEKSERT------KQVFGAVK-RVLASSLTDYDVYVCEHLTIVKCFKGVGFDNRFSILT 102 (333)
T ss_pred hccchhhhhhhccCCceeeeehhhhhhh------HHHHHHHH-HHHhccCCCccEEEeeeEEEEEEecccccccceeEEE
Confidence 34888988875555 3334455666544 67887777 5544421 1223456789999999999999999865
Q ss_pred CcCcccCCCceeEEEEEeecCCCCCcccccCCCCCCCCCCCCCCCCcchhhhcCCeeEecccccEEEeeecCCCCCCCCC
Q 022502 142 DKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPV 221 (296)
Q Consensus 142 ~~~~~~~~~~R~~T~liYLND~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~D~~ 221 (296)
.. ....+-.++++||+.+++||+|.++-.+ -++--.+ +=++| |..
T Consensus 103 ~~----~~~~~~Y~LvLyL~~p~~GGkt~iyv~~---------------------~t~i~~~-~DvLF---------DKs 147 (333)
T PHA02866 103 ED----RHRGREYTLVLHLSSPKNGGKTDVCVGD---------------------KTVISTA-DDFLL---------EKR 147 (333)
T ss_pred ec----cCCceEEEEEEEEeccccCCceEEEeCC---------------------CceEeec-cceee---------ecc
Confidence 42 1245789999999999999999998532 1111122 33455 568
Q ss_pred ccccCCcccccceEEEEEEee
Q 022502 222 SLHSGCPVIEGEKWSATKWIH 242 (296)
Q Consensus 222 ~lH~g~PV~~G~K~i~~~Wi~ 242 (296)
..|+..-|.+|.|.+|..=+-
T Consensus 148 l~h~S~~V~~G~K~Vali~V~ 168 (333)
T PHA02866 148 SEQLSNVVQEGEKIVVAVKVF 168 (333)
T ss_pred ccccceeeecCcEEEEEEEEE
Confidence 999999999999988765443
No 17
>TIGR02408 ectoine_ThpD ectoine hydroxylase. Both ectoine and hydroxyectoine are compatible solvents that serve as protectants against osmotic and thermal stresses. A number of genomes synthesize ectoine. This enzyme allows conversion of ectoine to hydroxyectoine, which may be more effective for some purposes, and is found in a subset of ectoine-producing organisms.
Probab=98.02 E-value=8.8e-05 Score=68.17 Aligned_cols=194 Identities=12% Similarity=0.094 Sum_probs=97.3
Q ss_pred eEEeecCCcEEEEcCCCCHHHHHHHHHHHhcccccceeeeCCCCc--ccccccccccccccCCCchHHHH------HHHH
Q 022502 35 VKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGE--SKLSDVRTSSGTFIPKGKDAIIA------GIED 106 (296)
Q Consensus 35 ve~ls~~P~i~ii~nfLs~~Ec~~li~~a~~~~~~s~v~~~~~g~--~~~~~~R~s~~~~l~~~~d~v~~------~i~~ 106 (296)
++.+..+-+ +++++||+++|++.|.+..+..+....+.....+. ......|.. +.....++++. .|.+
T Consensus 22 i~~f~~dGy-vvl~~vls~eev~~lr~~i~~~~~~~~~~~~~~~~~~~~~~~~r~~---~~~~~~~~~~~~l~~~p~l~~ 97 (277)
T TIGR02408 22 LQSYERDGF-LLLENLFSDDEVAALLAEVERMTRDPAIVRDEEAITEPGSNAVRSI---FEVHVLSPILARLVRDPRVAN 97 (277)
T ss_pred HHHHHHCCE-EECcccCCHHHHHHHHHHHHHHHhcccccCCCcceecCCCCceEEE---ecccccCHHHHHHHcChHHHH
Confidence 334444554 68999999999999999887654321111000000 000112211 11111234333 2344
Q ss_pred HHHHhcCCCCCCCCcceEEeeC-CCCcccccccccCCcCcccCCCceeEEEEEeecCCC-CCccccc-CCCCCCCCC-CC
Q 022502 107 KIATWTFLPKENGEDIQVLRYE-HGQKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVA-KGGETVF-PNAEEPPRR-RT 182 (296)
Q Consensus 107 Ri~~~~~~p~~~~E~~qv~rY~-~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~-~GGeT~F-p~~~~~~~~-~~ 182 (296)
.++++.|-+.......-+.+.. .|+.+.||.|...-.........+.+|+.|+|.|+. +.|.+.| |.+...... .+
T Consensus 98 ~~~~LlG~~~~l~~~~l~~kp~~~g~~~~WHQD~~~w~~~~~~p~~~~vt~wiaLdD~t~eNG~l~vIPGSH~~~~~~~~ 177 (277)
T TIGR02408 98 AARQILGSDVYVHQSRINMKPGFKGTGFYWHSDFETWHAEDGMPSMRAVSCSIALTDNNETNGPLMLVPGSHRTFISCVG 177 (277)
T ss_pred HHHHHcCCCeEEEeeeeeecCCCCCCCccCCcCCccccccCCCCCcCeEEEEEEcccCCCCCCCEEEecCCCCCcccCCc
Confidence 4555665432221111123344 256788999974311000011236899999999986 4466665 654322000 00
Q ss_pred -CCC---CCcc-------hh-------hhc-CCeeEecccccEEEeeecCCCCCCCCCccccCCccccc-ceEEEEEEe
Q 022502 183 -PAT---NDDL-------SE-------CAK-KGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEG-EKWSATKWI 241 (296)
Q Consensus 183 -~~~---~~~~-------~~-------c~~-~~~~V~P~~G~alvF~n~~~~g~~D~~~lH~g~PV~~G-~K~i~~~Wi 241 (296)
.+. +..+ .+ ... .-+.+.-++|++|+|. ..++|++-|-.+. .|+++..=+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~~~aGDvl~f~---------~~~~H~S~~N~s~~~R~~l~l~y 247 (277)
T TIGR02408 178 ETPRDNYKQSLKKQEYGVPDPVSLTKLADQGGISTFTGKAGSAVWFD---------CNTMHGSGSNITPWPRSNVFMVF 247 (277)
T ss_pred cccchhhhhhhhhhhcCCCCHHHHHHHHHhCCceeeccCCceEEEEc---------cccccCCCCCCCCCcceeEEEEE
Confidence 000 0000 00 001 1235666999999996 4799999998875 566655444
No 18
>PF09859 Oxygenase-NA: Oxygenase, catalysing oxidative methylation of damaged DNA; InterPro: IPR018655 This family of various hypothetical prokaryotic proteins, has no known function.
Probab=97.79 E-value=8e-05 Score=62.44 Aligned_cols=102 Identities=25% Similarity=0.308 Sum_probs=74.4
Q ss_pred cceEEeeCCCCcccccccccCCcCcccCCCceeEEEEEeecCC---CCCcccccCCCCCCCCCCCCCCCCcchhhhcCCe
Q 022502 121 DIQVLRYEHGQKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDV---AKGGETVFPNAEEPPRRRTPATNDDLSECAKKGI 197 (296)
Q Consensus 121 ~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~---~~GGeT~Fp~~~~~~~~~~~~~~~~~~~c~~~~~ 197 (296)
..-+++|++|++=..|.|..-+.. =-+-+++-||++ ++|||.++-...+.. | ....
T Consensus 63 tplllrY~~gdyn~LHqdlyGe~v-------FPlQvv~lLs~Pg~DftGGEFVltEQrPR~-Q-------------SR~~ 121 (173)
T PF09859_consen 63 TPLLLRYGPGDYNCLHQDLYGEHV-------FPLQVVILLSEPGEDFTGGEFVLTEQRPRM-Q-------------SRAM 121 (173)
T ss_pred chhhheeCCCCccccccCCCCCcc-------cCeEEEEEcCCCCCcccCceEEEEEecCCc-c-------------Cccc
Confidence 467899999999999999864311 124677889985 589999987654322 1 1367
Q ss_pred eEecccccEEEeeec-CCC-C---CCCCCccccCCcccccceEEEEEEeec
Q 022502 198 AVKPRRGDALLFFSL-HTN-A---IPDPVSLHSGCPVIEGEKWSATKWIHV 243 (296)
Q Consensus 198 ~V~P~~G~alvF~n~-~~~-g---~~D~~~lH~g~PV~~G~K~i~~~Wi~~ 243 (296)
.+.+.+|+|+||..- .|- | ---..+-|++.+|.+|+++.+-.=||.
T Consensus 122 V~~L~qGda~if~t~~RPv~G~rG~yRv~~RHgVS~vrsG~R~tLgliFHD 172 (173)
T PF09859_consen 122 VLPLRQGDALIFATNHRPVRGARGYYRVNMRHGVSRVRSGERHTLGLIFHD 172 (173)
T ss_pred cCCcCCCCEEEEecCCCCcCCCccceecccccccccccccceEEEEEEeec
Confidence 899999999999742 221 2 222357899999999999999887764
No 19
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A.
Probab=97.70 E-value=8e-05 Score=57.91 Aligned_cols=93 Identities=24% Similarity=0.252 Sum_probs=46.0
Q ss_pred EeeCCCCcccccccccCCcCcccCCCceeEEEEEeecCCCCCcccccCCCCCCCCCCCCCCCCcchhhhcCCeeEecccc
Q 022502 125 LRYEHGQKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRRG 204 (296)
Q Consensus 125 ~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~c~~~~~~V~P~~G 204 (296)
..|.+|++-.+|.= ....++.++||+.++..|.+.|.+..................-......|+|+.|
T Consensus 5 ni~~~g~~~~~H~H-----------~~s~~SgVyYv~~p~~~~~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~G 73 (101)
T PF13759_consen 5 NIYRKGGYNEPHNH-----------PNSWLSGVYYVQVPEGSGPLRFHDPRGSFSFGAPFDNYDQNDLNSPYYIVEPEEG 73 (101)
T ss_dssp EEE-TT--EEEE-------------TT-SEEEEEECE--TTS-SEEEE-TTCCCGTTS----TTTTCCC-SEEEE---TT
T ss_pred EEeCCCCccCceEC-----------CCcCEEEEEEEECCCCCCceeeeCCCccceecccccccccCcccCceEEeCCCCC
Confidence 45677877777653 2357999999998888888999764322110000000000111123678999999
Q ss_pred cEEEeeecCCCCCCCCCccccCCccccc-ceEEE
Q 022502 205 DALLFFSLHTNAIPDPVSLHSGCPVIEG-EKWSA 237 (296)
Q Consensus 205 ~alvF~n~~~~g~~D~~~lH~g~PV~~G-~K~i~ 237 (296)
++|||++ .+.|++.|-... .|+++
T Consensus 74 ~lvlFPs---------~l~H~v~p~~~~~~Risi 98 (101)
T PF13759_consen 74 DLVLFPS---------WLWHGVPPNNSDEERISI 98 (101)
T ss_dssp EEEEEET---------TSEEEE----SSS-EEEE
T ss_pred EEEEeCC---------CCEEeccCcCCCCCEEEE
Confidence 9999997 699999998875 56554
No 20
>KOG3844 consensus Predicted component of NuA3 histone acetyltransferase complex [Chromatin structure and dynamics]
Probab=97.65 E-value=0.00066 Score=64.22 Aligned_cols=176 Identities=20% Similarity=0.299 Sum_probs=106.0
Q ss_pred cCCc-EEEEcCCCCHHHHHHHHHHHhc--cccccee--ee-CCCCcccccccccccccccCC---CchHHHHHHHHHHHH
Q 022502 40 WKPR-AFVYEGFLTDLECDHLINLAKS--QLKRSAV--AD-NLSGESKLSDVRTSSGTFIPK---GKDAIIAGIEDKIAT 110 (296)
Q Consensus 40 ~~P~-i~ii~nfLs~~Ec~~li~~a~~--~~~~s~v--~~-~~~g~~~~~~~R~s~~~~l~~---~~d~v~~~i~~Ri~~ 110 (296)
..|+ =+++++|+.+...+.+.+..+. ++++-.. .. ..+| +.++-.++-.+. -.+.+......-|+.
T Consensus 33 ngPf~h~~i~~~vnd~~l~~vrkei~~~~~f~~k~tDlyr~~Qtg-----dL~nl~~le~p~lf~~r~~Lyke~r~~~q~ 107 (476)
T KOG3844|consen 33 NGPFNHFIIRDFVNDSLLRVVRKEIHGSIHFTEKETDLYRVLQTG-----DLANLEGLEFPALFSFRDSLYKEARGEIQD 107 (476)
T ss_pred cCCCcceeeeccCCHHHHHHHHHHHhhccchhhhcchhhheeccc-----cccccccccchhHHHHHHHHHHHHHHHHHh
Confidence 4455 3789999998877777755443 2332111 00 0011 122222211000 001122233334455
Q ss_pred hcCCCCCCCCcceEEeeCCCCcccccccccCCcCcccCCCceeEEEEEeecCCC----CCcccc-cCCCCCCCCCCCCCC
Q 022502 111 WTFLPKENGEDIQVLRYEHGQKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVA----KGGETV-FPNAEEPPRRRTPAT 185 (296)
Q Consensus 111 ~~~~p~~~~E~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~----~GGeT~-Fp~~~~~~~~~~~~~ 185 (296)
++|--..-.-++.+..|..|.+--.|-|-. +.|.+++++||-|.. .||++. ||.... .| ++
T Consensus 108 vtg~~s~sk~Dms~s~Y~kgd~LL~HDD~i---------etRriaFilYL~~~Dwds~~GG~L~Lf~~d~~--~~---P~ 173 (476)
T KOG3844|consen 108 VTGGLSTSKIDMSGSYYRKGDHLLCHDDVI---------ETRRIAFILYLVDPDWDSEYGGELRLFPDDCP--SQ---PK 173 (476)
T ss_pred ccCccccceeeeceeeeeccceeccccccc---------cceEEEEEEEecCcccccccCceeEecccccc--cC---cc
Confidence 564333334578899999999999998864 468999999999875 488876 554321 11 00
Q ss_pred CCcchhhhcCCeeEecccccEEEeeecCCCCCCCCCccccCCcccccc-eEEEEEEeeccccccc
Q 022502 186 NDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGE-KWSATKWIHVDSFDKI 249 (296)
Q Consensus 186 ~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~-K~i~~~Wi~~~~~~~~ 249 (296)
+ --.++.|+-...++|.- -+-+.|.+..|.+-+ |..++.|+|......|
T Consensus 174 ----s----~~asl~P~~Nql~fFeV-------sp~SFH~V~Ev~sde~RlSIsGWfH~p~~~eP 223 (476)
T KOG3844|consen 174 ----S----VAASLEPQWNQLVFFEV-------SPISFHDVEEVLSDEPRLSISGWFHFPQIGEP 223 (476)
T ss_pred ----c----hhhccCcccceEEEEEe-------cccchhhHHHHhccCcceeEeeeecCCccCCC
Confidence 0 12468899999888864 257999999999765 4999999998765433
No 21
>PF05721 PhyH: Phytanoyl-CoA dioxygenase (PhyH); InterPro: IPR008775 This family is made up of several eukaryotic phytanoyl-CoA dioxygenase (PhyH) proteins as well as a number of bacterial deoxygenases. PhyH is a peroxisomal enzyme catalysing the first step of phytanic acid alpha-oxidation. PhyH deficiency causes Refsum's disease (RD) which is an inherited neurological syndrome biochemically characterised by the accumulation of phytanic acid in plasma and tissues [].; PDB: 3GJA_A 3EMR_A 3OBZ_A 2OPW_A 3NNL_B 3NNF_A 3NNM_B 3NNJ_A 2FCV_B 2FCU_A ....
Probab=97.54 E-value=0.0004 Score=59.28 Aligned_cols=170 Identities=16% Similarity=0.093 Sum_probs=84.8
Q ss_pred EEEEcCCCCHHHHHHHHHHHhcc----ccc---ceeeeCCCCcccccccccccccccCCCc---hHHH-H-HHHHHHHHh
Q 022502 44 AFVYEGFLTDLECDHLINLAKSQ----LKR---SAVADNLSGESKLSDVRTSSGTFIPKGK---DAII-A-GIEDKIATW 111 (296)
Q Consensus 44 i~ii~nfLs~~Ec~~li~~a~~~----~~~---s~v~~~~~g~~~~~~~R~s~~~~l~~~~---d~v~-~-~i~~Ri~~~ 111 (296)
.++++|+|+++|++.|.+..... ... ..+... +. .......++.... +.+. . .+.+.++++
T Consensus 6 yvvi~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (211)
T PF05721_consen 6 YVVIRNVLSPEEVERLREELDRLDDRALEPDQDVSDFFD--ES-----FFGDYTEQLAKSPNFYDLFLHPPRILDLVRAL 78 (211)
T ss_dssp EEEETTSS-HHHHHHHHHHHHHHHHHHTTTTTSCEEEES--TS-----CCCTCCCCGCCCHHHHHHHHTHHHHHHHHHHH
T ss_pred EEEECCcCCHHHHHHHHHHHHHHHhhhhccccccccccc--cc-----cccccccccccchhhHHHHhhHHHHHHHHHHh
Confidence 57899999999999999998763 111 111100 00 0001111111100 1111 2 455556666
Q ss_pred cCCCCC----CCCcce-EEeeC-CCCcc-cccccccCCcCcccCCCceeEEEEEeecCCC-CCccccc-CCCCCCCCC--
Q 022502 112 TFLPKE----NGEDIQ-VLRYE-HGQKY-EPHYDYFSDKVNIVRGGHRLATVLMYLSDVA-KGGETVF-PNAEEPPRR-- 180 (296)
Q Consensus 112 ~~~p~~----~~E~~q-v~rY~-~G~~y-~~H~D~~~~~~~~~~~~~R~~T~liYLND~~-~GGeT~F-p~~~~~~~~-- 180 (296)
.+.... ....++ +.+-. .|... .||.|...-.. ....+.+|+.|+|.|+. +.|.+.+ |.+......
T Consensus 79 ~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~wH~D~~~~~~---~~~~~~~~~wi~L~d~~~~~G~~~v~pGSH~~~~~~~ 155 (211)
T PF05721_consen 79 LGSDVFVQNWLQSMYQDIVKPPGPGAAVQPWHQDAPYWHT---DPPENQLTVWIALDDITPENGPLEVVPGSHKWGVEPH 155 (211)
T ss_dssp HTSSEEEE--EEEEEEEEEE-TTTTC-EEEEBEHHHCSTE---ESSSCEEEEEEESS-BBTTCTCEEEETTGCCSCCEEE
T ss_pred hCCcchhhhhhHHHHHhhhhccccCCCCCCCCCCCccccc---CCccceEEEEEeeccCCcccCceEeecCCcCCCcccc
Confidence 664421 111221 23322 46665 89999876421 11578999999999984 5555655 543321110
Q ss_pred -CCCCCCCc--c----hhh-hcCCeeEecccccEEEeeecCCCCCCCCCccccCCccccc
Q 022502 181 -RTPATNDD--L----SEC-AKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEG 232 (296)
Q Consensus 181 -~~~~~~~~--~----~~c-~~~~~~V~P~~G~alvF~n~~~~g~~D~~~lH~g~PV~~G 232 (296)
........ . ... ....+.+..++|++|||. ..++|++-|-.+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gdvl~~~---------~~~~H~s~~N~s~ 206 (211)
T PF05721_consen 156 EERFPEEDFPEEDDEESDEDEDEWVPVPMKAGDVLFFH---------SRLIHGSGPNTSD 206 (211)
T ss_dssp CCCCCCCCCCCCHHHHHHHHCSGCEEE-BSTTEEEEEE---------TTSEEEEE-B-SS
T ss_pred cccccccccccccccccccccCceEEeecCCCeEEEEc---------CCccccCCCCCCc
Confidence 00010000 0 111 123578999999999996 4899999986653
No 22
>TIGR02466 conserved hypothetical protein. This family consists of uncharacterized proteins in Caulobacter crescentus CB15, Bdellovibrio bacteriovorus HD100, Synechococcus sp. WH 8102 (2), Silicibacter pomeroyi DSS-3 (2), and Hyphomonas neptunium ATCC 15444. The context of nearby genes differs substantially between members and does point to any specific biological role.
Probab=97.27 E-value=0.0013 Score=57.68 Aligned_cols=95 Identities=20% Similarity=0.227 Sum_probs=60.3
Q ss_pred EEeeCCCCcccccccccCCcCcccCCCceeEEEEEeecCCCCCcccccCCCCCCCCCCCCCCCCcchhhhcCCeeEeccc
Q 022502 124 VLRYEHGQKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRR 203 (296)
Q Consensus 124 v~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~c~~~~~~V~P~~ 203 (296)
+.++.+|++-..|+= .+-.++-++||+.++.+|.+.|-+.........++............+.|+|+.
T Consensus 100 ~ni~~~Gg~h~~H~H-----------p~~~lSgvyYl~~p~~~g~~~f~~p~~~~~~~~~~~~~~~~~~~~~~~~v~P~~ 168 (201)
T TIGR02466 100 VNILPQGGTHSPHLH-----------PGSVISGTYYVQTPENCGAIKFEDPRLDDMMAAPMRIPNAKRAVQRFVYVPPQE 168 (201)
T ss_pred EEEcCCCCccCceEC-----------CCceEEEEEEEeCCCCCCceeEecCcchhhhccccccCccccccCccEEECCCC
Confidence 556778887666652 245899999999988888888854321100000000000001112356799999
Q ss_pred ccEEEeeecCCCCCCCCCccccCCcccc-cceEEEE
Q 022502 204 GDALLFFSLHTNAIPDPVSLHSGCPVIE-GEKWSAT 238 (296)
Q Consensus 204 G~alvF~n~~~~g~~D~~~lH~g~PV~~-G~K~i~~ 238 (296)
|++|||+| .+.|++.|-.. ++|+++.
T Consensus 169 G~lvlFPS---------~L~H~v~p~~~~~~RISiS 195 (201)
T TIGR02466 169 GRVLLFES---------WLRHEVPPNESEEERISVS 195 (201)
T ss_pred CeEEEECC---------CCceecCCCCCCCCEEEEE
Confidence 99999997 69999999885 4676653
No 23
>TIGR01762 chlorin-enz chlorinating enzymes. This model represents a a group of highly homologous enzymes related to dioxygenases which chlorinate amino acid methyl groups. BarB1 and BarB2 are proposed to trichlorinate one of the methyl groups of a leucine residue in the biosynthesis of barbamide in the cyanobacterium Lyngbya majuscula. SyrB2 is proposed to chlorinate the methyl group of threonine in the biosynthesis of syringomycin in Pseudomonas syringae. CmaB is proposed to chlorinate the beta-methyl group of alloisoleucine in the process of ring closure in the biosynthesis of coronamic acid, a component of coronatine also in Pseudomonas syringae.
Probab=97.11 E-value=0.025 Score=52.34 Aligned_cols=187 Identities=11% Similarity=0.076 Sum_probs=96.0
Q ss_pred eecCCcEEEEcCCCCHHHHHHHHHHHhcccc-cceeeeCCCCcccccccccccccccCCCchHHH------HHHHHHHHH
Q 022502 38 ISWKPRAFVYEGFLTDLECDHLINLAKSQLK-RSAVADNLSGESKLSDVRTSSGTFIPKGKDAII------AGIEDKIAT 110 (296)
Q Consensus 38 ls~~P~i~ii~nfLs~~Ec~~li~~a~~~~~-~s~v~~~~~g~~~~~~~R~s~~~~l~~~~d~v~------~~i~~Ri~~ 110 (296)
...+- .++++++||++|++.|.+.++..+. ++.......+. ..|.. |-....++.+ .+|.+.+++
T Consensus 11 y~e~G-yv~~~~~~s~eei~~L~~~~~~~l~~~~~~~~~~~~~----~~~~~---~~~~~~~~~~~~l~~~~~l~~~~~~ 82 (288)
T TIGR01762 11 FEKNG-FIGPFTLYSPEEMKETWKRIRLRLLDRSAAPYQDLGG----TNIAN---YDRHLDDDFLASHICRPEICHRVES 82 (288)
T ss_pred HHhCC-EEeCcCCCCHHHHHHHHHHHHHHhhccccccccCCCC----ceeEe---eeecccCHHHHHHhcCHHHHHHHHH
Confidence 33344 4579999999999999998865332 21111000011 11111 1010112222 234455556
Q ss_pred hcCCCCCCCCcceEEeeCCCCcccccccccCCcCcc--------cCCCceeEEEEEeecCCC-CCccccc-CCCCCCCCC
Q 022502 111 WTFLPKENGEDIQVLRYEHGQKYEPHYDYFSDKVNI--------VRGGHRLATVLMYLSDVA-KGGETVF-PNAEEPPRR 180 (296)
Q Consensus 111 ~~~~p~~~~E~~qv~rY~~G~~y~~H~D~~~~~~~~--------~~~~~R~~T~liYLND~~-~GGeT~F-p~~~~~~~~ 180 (296)
+.|-++...-..-+.+...++...||.|...-.... .....+.+|+.|-|.|+. +-|.+.| |.+......
T Consensus 83 llG~~v~l~~~~~~~K~pg~~~~~wHQD~~y~~~~~~~~~~~p~~~~~~~~vt~wiaLdd~t~eNG~L~viPGSH~~~~~ 162 (288)
T TIGR01762 83 ILGPNVLCWRTEFFPKYPGDEGTDWHQADTFANASGKPQLVWPENEEFGGTITVWTAFTDATIENGCMQFIPGTHNSMNY 162 (288)
T ss_pred HhCCcEEeeeceeeeeCCCCCCCCCCccCcccccCCcccccccccCCCCCeEEEEEEcccCCcccCCEEEECCCCCCCCC
Confidence 666443222222344555445578999965421100 011247899999999985 4555544 443321100
Q ss_pred -------CCCC-----------------------CCCcchhhhcCCeeEecccccEEEeeecCCCCCCCCCccccCCccc
Q 022502 181 -------RTPA-----------------------TNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVI 230 (296)
Q Consensus 181 -------~~~~-----------------------~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~D~~~lH~g~PV~ 230 (296)
..+. .+..+.......+.+.-++|++++|. ..++|++.|-+
T Consensus 163 ~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~l~~d~~~~~~~~~~v~~~lkaGd~~~f~---------~~t~HgS~~N~ 233 (288)
T TIGR01762 163 DETRRMTFEPDANNSVVKGGVRRGFFGYDYRQLQIDENWKPDEASAVPMQMKAGQFIIFW---------STLMHASYPNS 233 (288)
T ss_pred CcccccccCccccccccccccccccccccchhhcccccCCccccceeeeeeCCceEEEEC---------CCceecCCCCC
Confidence 0000 00001111112467777899999995 47999999998
Q ss_pred ccc--eEEEEE-Ee
Q 022502 231 EGE--KWSATK-WI 241 (296)
Q Consensus 231 ~G~--K~i~~~-Wi 241 (296)
+.. |+.++. |+
T Consensus 234 S~~~~R~~~~~ry~ 247 (288)
T TIGR01762 234 GESQMRMGFASRYV 247 (288)
T ss_pred CCCceEEEEEEEEc
Confidence 853 555433 55
No 24
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A ....
Probab=96.84 E-value=0.005 Score=52.97 Aligned_cols=153 Identities=18% Similarity=0.192 Sum_probs=75.1
Q ss_pred EEEEcCCCCHHHHHHHHHHHhcc--cccceeeeCCCCcccc---------------cccccccc-----cccCCCchHHH
Q 022502 44 AFVYEGFLTDLECDHLINLAKSQ--LKRSAVADNLSGESKL---------------SDVRTSSG-----TFIPKGKDAII 101 (296)
Q Consensus 44 i~ii~nfLs~~Ec~~li~~a~~~--~~~s~v~~~~~g~~~~---------------~~~R~s~~-----~~l~~~~d~v~ 101 (296)
+++++||||++|.+.|++..... +....... ++... ..++-+.. .-++. ..+.+
T Consensus 2 ~~~~~~fls~~e~~~l~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~y~y~~~~~~~~~~~~~-~p~~l 77 (194)
T PF13532_consen 2 LYYIPNFLSEEEAAELLNELRESAPFRQPTYPM---GKVYSLPRKLCGGLSWVGDGPSYRYSGKRPVRSKPWPP-FPEWL 77 (194)
T ss_dssp EEEETTSS-HHHHHHHHHHHHHHS--B-GCCCC---CCECCECCE-SSEEEEEECT--CCCTCC-EECCCEBSC-CHHHH
T ss_pred EEEECCCCCHHHHHHHHHHHHhhCCCcCCeEcC---CCEEccceecceeeEEECCCCCeEcCCccccCCCCCCC-ccHHH
Confidence 68999999999999999998742 11111100 11000 01111110 01110 12345
Q ss_pred HHHHHHHHHhcC-CCCCCCCcceEEeeCCCCcccccccccCCcCcccCCCceeEEEEEeecCCCCCcccccCCCCCCCCC
Q 022502 102 AGIEDKIATWTF-LPKENGEDIQVLRYEHGQKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRR 180 (296)
Q Consensus 102 ~~i~~Ri~~~~~-~p~~~~E~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~~GGeT~Fp~~~~~~~~ 180 (296)
..+.+++....+ .+........|..|..|+.-.+|.|.... ..+..++|+-+ |+..+|-.......
T Consensus 78 ~~~~~~~~~~~~~~~~~~~n~~liN~Y~~g~~i~~H~D~~~~-----~~~~~I~slSL-------G~~~~~~f~~~~~~- 144 (194)
T PF13532_consen 78 SRLLERLVEATGIPPGWRPNQCLINYYRDGSGIGPHSDDEEY-----GFGPPIASLSL-------GSSRVFRFRNKSDD- 144 (194)
T ss_dssp HHHHHHHHHHHT-SHSS--SEEEEEEESSTT-EEEE---TTC------CCSEEEEEEE-------ES-EEEEEEECGGT-
T ss_pred HHHHHHHHHHhccccCCCCCEEEEEecCCCCCcCCCCCcccc-----cCCCcEEEEEE-------ccCceEEEeeccCC-
Confidence 556666655444 22222345677899999999999998632 12456677665 33333322110000
Q ss_pred CCCCCCCcchhhhcCCeeEecccccEEEeeecCCCCCCCCCccccCCccccc
Q 022502 181 RTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEG 232 (296)
Q Consensus 181 ~~~~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~D~~~lH~g~PV~~G 232 (296)
+..+.|.-..|+++++.. ...... |++.|+..+
T Consensus 145 -------------~~~~~~~L~~gsl~vm~g-----~~r~~~-H~I~~~~~~ 177 (194)
T PF13532_consen 145 -------------DEPIEVPLPPGSLLVMSG-----EARYDW-HGIPPVKKD 177 (194)
T ss_dssp -------------S-EEEEEE-TTEEEEEET-----THHHHE-EEE-S-SCE
T ss_pred -------------CccEEEEcCCCCEEEeCh-----HHhhhe-eEcccccCC
Confidence 025788999999999962 222345 999998874
No 25
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro []. Interestingly TET2 is considered as an oncogene, as it is found mutated in some types of cancer []. This entry represents the double-stranded beta helix (DSBH) fold of the 2-oxoglutarate (2OG) - Fe(II) oxygenases. DSBH comprises a part of the catalytic domain in TETS. It is found in many organisms including fruit fly, African malaria mosquito, zebrafish, mouse and human.
Probab=96.27 E-value=0.016 Score=49.63 Aligned_cols=79 Identities=25% Similarity=0.293 Sum_probs=58.7
Q ss_pred cccccccccCCcCcccCCCceeEEEEEeecCC-CCCcccccCCCCCCCCCCCCCCCCcchhhhcCCeeEecccccEEEee
Q 022502 132 KYEPHYDYFSDKVNIVRGGHRLATVLMYLSDV-AKGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFF 210 (296)
Q Consensus 132 ~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~-~~GGeT~Fp~~~~~~~~~~~~~~~~~~~c~~~~~~V~P~~G~alvF~ 210 (296)
....|.|.... +--+++++-|.-. ++||..++|..+..- .|++|.|..|++|+|-
T Consensus 86 ~t~~HrD~~~~--------~~~~~~~~t~~~gd~~~g~l~lp~~~~~~----------------~g~~~~~~~GtVl~~~ 141 (171)
T PF12851_consen 86 CTHSHRDTHNM--------PNGYDVLCTLGRGDYDGGRLELPGLDPNI----------------LGVAFAYQPGTVLIFC 141 (171)
T ss_pred CccceecCCCC--------CCCeEEEEecCCccccCceEecccccccc----------------CCEEEecCCCcEEEEc
Confidence 34578887432 2346777666543 889999999832111 2899999999999996
Q ss_pred ecCCCCCCCCCccccCCcccc-----cceEEEEEEee
Q 022502 211 SLHTNAIPDPVSLHSGCPVIE-----GEKWSATKWIH 242 (296)
Q Consensus 211 n~~~~g~~D~~~lH~g~PV~~-----G~K~i~~~Wi~ 242 (296)
. ...+|++.||.. |+|+.+.-+.|
T Consensus 142 ~--------~~~~Hgvtpv~~~~~~~~~R~slvfy~h 170 (171)
T PF12851_consen 142 A--------KRELHGVTPVESPNRNHGTRISLVFYQH 170 (171)
T ss_pred c--------cceeeecCcccCCCCCCCeEEEEEEEeE
Confidence 4 368999999997 99999987765
No 26
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional
Probab=96.01 E-value=0.24 Score=43.87 Aligned_cols=160 Identities=17% Similarity=0.181 Sum_probs=90.1
Q ss_pred cCCcEEEEcCCCCHHHHHHHHHHHhc-----ccccceeeeCC--------CCc----cccccccccccc-ccCCCc---h
Q 022502 40 WKPRAFVYEGFLTDLECDHLINLAKS-----QLKRSAVADNL--------SGE----SKLSDVRTSSGT-FIPKGK---D 98 (296)
Q Consensus 40 ~~P~i~ii~nfLs~~Ec~~li~~a~~-----~~~~s~v~~~~--------~g~----~~~~~~R~s~~~-~l~~~~---d 98 (296)
..|.++++++|+ .+|.++|++..+. .+..-.+-++. -|. +....+|-|... .-.... .
T Consensus 16 ~~~g~~~~~~~~-~~~~~~l~~~~~~~~~~~p~~~~~~~gg~~msv~mt~~G~~~W~~d~~~YrYs~~~~~~~~pwp~~P 94 (213)
T PRK15401 16 LAPGAVLLRGFA-LAAAEALLAAIEAVAAQAPFRHMVTPGGYTMSVAMTNCGALGWVTDRRGYRYSPIDPLTGKPWPAMP 94 (213)
T ss_pred cCCCcEEeCCCC-HHHHHHHHHHHHHHHhcCCccceecCCCCcceeEEeccccceEecCCCCcccCCcCCCCCCCCCCch
Confidence 457899999996 8888888777654 12221111000 010 001123333211 000011 2
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCcceEEeeCCCCcccccccccCCcCcccCCCceeEEEEEeecCCCCCcccccCCCCCCC
Q 022502 99 AIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPP 178 (296)
Q Consensus 99 ~v~~~i~~Ri~~~~~~p~~~~E~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~~GGeT~Fp~~~~~~ 178 (296)
+.+..|.++++...+.+....+..-|..|.+|+.-.+|.|..... ...-++++.+ |.+-.|-......
T Consensus 95 ~~l~~L~~~~~~~~~~~~~~p~a~LvN~Y~~G~~mg~H~D~~E~~-----~~~pI~SvSL-------G~~~~F~~~~~~~ 162 (213)
T PRK15401 95 ASFLALAQRAAAAAGFPGFQPDACLINRYAPGAKLSLHQDKDERD-----FRAPIVSVSL-------GLPAVFQFGGLKR 162 (213)
T ss_pred HHHHHHHHHHHHHcCCCCCCCCEEEEEeccCcCccccccCCCccc-----CCCCEEEEeC-------CCCeEEEecccCC
Confidence 367888899988777643344568889999999999999974211 1223444442 3344554321000
Q ss_pred CCCCCCCCCcchhhhcCCeeEecccccEEEeeecCCCCCCCCCccccCCccccc
Q 022502 179 RRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEG 232 (296)
Q Consensus 179 ~~~~~~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~D~~~lH~g~PV~~G 232 (296)
. +...+|.-.-|++||+- |. ....+|++-++..|
T Consensus 163 ~--------------~~~~~l~L~~Gdllvm~-----G~-sr~~~HgVp~~~~~ 196 (213)
T PRK15401 163 S--------------DPLQRILLEHGDVVVWG-----GP-SRLRYHGILPLKAG 196 (213)
T ss_pred C--------------CceEEEEeCCCCEEEEC-----ch-HhheeccCCcCCCC
Confidence 0 01468999999999994 32 23567999888765
No 27
>PHA02923 hypothetical protein; Provisional
Probab=95.57 E-value=0.083 Score=48.57 Aligned_cols=101 Identities=16% Similarity=0.151 Sum_probs=68.1
Q ss_pred hHHHHHHHHHHHHhcCC--CCCCCCcceEEeeCCCCcccccccccCCcCcccCCCceeEEEEEeecCCCCCcccccCCCC
Q 022502 98 DAIIAGIEDKIATWTFL--PKENGEDIQVLRYEHGQKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAE 175 (296)
Q Consensus 98 d~v~~~i~~Ri~~~~~~--p~~~~E~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~~GGeT~Fp~~~ 175 (296)
+++...|++.|-.-... .+.....+.+..|++|.+ -|. . ....-..+++||+.+++||+|.|+..+
T Consensus 43 ~di~~~ir~liy~elk~v~~V~V~n~iT~ikYekgd~--~~l--~--------~~~~~y~LvLyL~~p~~GGt~i~~~~~ 110 (315)
T PHA02923 43 IDISECIREILYKQFKNVRNIEVSSTISFIKYNPFND--TTL--T--------DDNMGYYLVIYLNRPKSGKTLIYPTPE 110 (315)
T ss_pred hHHHHHHHHHHHHhccCcceEEEeceEEEEEEcCCCc--cee--e--------cCceEEEEEEEEeccCCCCeEEEecCC
Confidence 56777777766543221 122345688999999985 111 0 123778899999999999999998753
Q ss_pred CCCCCCCCCCCCcchhhhcCCeeEecccccEEEeeecCCCCCCCCCccccCCcccccceEEEEEEeec
Q 022502 176 EPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIHV 243 (296)
Q Consensus 176 ~~~~~~~~~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~ 243 (296)
++--.+ +=++| |....|+..-|.+|.|.+|.. +-.
T Consensus 111 ----------------------t~i~~~-~DvLF---------dKsl~h~s~~V~~G~K~VAl~-V~l 145 (315)
T PHA02923 111 ----------------------TVITSS-EDIMF---------SKSLNFRFENVKRGYKLVMCS-ISL 145 (315)
T ss_pred ----------------------CeEeec-cceee---------ecccccceeeeecCcEEEEEE-EEE
Confidence 111122 23456 568999999999999998776 543
No 28
>KOG3200 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.41 E-value=0.15 Score=43.43 Aligned_cols=94 Identities=19% Similarity=0.241 Sum_probs=59.4
Q ss_pred eecCCcEEEEcCCCCHHHHHHHHHHHhcc----ccc---ceeeeCCCCcccccccccccccccCCCchHHHHHHHHHHHH
Q 022502 38 ISWKPRAFVYEGFLTDLECDHLINLAKSQ----LKR---SAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIAT 110 (296)
Q Consensus 38 ls~~P~i~ii~nfLs~~Ec~~li~~a~~~----~~~---s~v~~~~~g~~~~~~~R~s~~~~l~~~~d~v~~~i~~Ri~~ 110 (296)
+...|.+++|+||+++||-..++.-.+.. |+. -.+. +- |..+ -....++..-.+-++.+..+|..
T Consensus 8 V~~~pt~~YIPnfIt~EEe~~~lshIe~ap~pkW~~L~NRRLq-Ny-GGvv------h~~glipeelP~wLq~~v~kinn 79 (224)
T KOG3200|consen 8 VKSAPTMIYIPNFITEEEENLYLSHIENAPQPKWRVLANRRLQ-NY-GGVV------HKTGLIPEELPPWLQYYVDKINN 79 (224)
T ss_pred ecccceEEEcCCccChHHHHHHHHHHhcCCCchhHHHHhhhhh-hc-CCcc------ccCCcCccccCHHHHHHHHHhhc
Confidence 55678999999999999999888877642 210 0011 00 1111 01123333234566777777776
Q ss_pred hcCCCCCCCCcceEEeeCCCCccccccccc
Q 022502 111 WTFLPKENGEDIQVLRYEHGQKYEPHYDYF 140 (296)
Q Consensus 111 ~~~~p~~~~E~~qv~rY~~G~~y~~H~D~~ 140 (296)
+.-++. .....-|..|.+||---||.|+.
T Consensus 80 lglF~s-~~NHVLVNeY~pgqGImPHtDGP 108 (224)
T KOG3200|consen 80 LGLFKS-PANHVLVNEYLPGQGIMPHTDGP 108 (224)
T ss_pred ccccCC-CcceeEeecccCCCCcCcCCCCC
Confidence 544432 34457788999999999999984
No 29
>COG3826 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.86 E-value=0.27 Score=42.31 Aligned_cols=103 Identities=20% Similarity=0.234 Sum_probs=71.9
Q ss_pred CcceEEeeCCCCcccccccccCCcCcccCCCceeEEEEEeecCCC---CCcccccCCCCCCCCCCCCCCCCcchhhhcCC
Q 022502 120 EDIQVLRYEHGQKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVA---KGGETVFPNAEEPPRRRTPATNDDLSECAKKG 196 (296)
Q Consensus 120 E~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~---~GGeT~Fp~~~~~~~~~~~~~~~~~~~c~~~~ 196 (296)
...-++.|.+|.+=-.|.|-.-+. -=-+.+.|-|+|+. .|||.+.-...+.. | ..+
T Consensus 124 pTpLlLqYgpgD~NcLHQDLYGel-------vFPLQvailLsePg~DfTGGEF~lvEQRPR~-Q-------------Sr~ 182 (236)
T COG3826 124 PTPLLLQYGPGDYNCLHQDLYGEL-------VFPLQVAILLSEPGTDFTGGEFVLVEQRPRM-Q-------------SRP 182 (236)
T ss_pred CCceeEEecCCccchhhhhhhhce-------eeeeeEEEeccCCCCcccCceEEEEeccccc-c-------------cCC
Confidence 345689999999999999976431 11355777799874 79998775543221 1 135
Q ss_pred eeEecccccEEEeeecC-C-CCC---CCCCccccCCcccccceEEEEEEeec
Q 022502 197 IAVKPRRGDALLFFSLH-T-NAI---PDPVSLHSGCPVIEGEKWSATKWIHV 243 (296)
Q Consensus 197 ~~V~P~~G~alvF~n~~-~-~g~---~D~~~lH~g~PV~~G~K~i~~~Wi~~ 243 (296)
-.|.-.+|++++|--.+ | +|+ .-...-|.+.-+.+|+++.+-.=||.
T Consensus 183 ~vvpLrqG~g~vFavr~RPv~gtrG~~r~~lRHGvS~lRSG~R~t~GiIFHD 234 (236)
T COG3826 183 TVVPLRQGDGVVFAVRDRPVQGTRGWYRVPLRHGVSRLRSGERHTVGIIFHD 234 (236)
T ss_pred ceeeccCCceEEEEeecCcccCccCccccchhcchhhhhcccceeeEEEeec
Confidence 67888999999997432 1 232 22346799999999999998877764
No 30
>KOG3371 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.93 E-value=0.032 Score=49.99 Aligned_cols=47 Identities=23% Similarity=0.477 Sum_probs=35.4
Q ss_pred EEEEEeeccccccccCCccccccCccccHHHhhcCc--cccCcccccccccCcchhhhhcCCC
Q 022502 236 SATKWIHVDSFDKIVEEGGDCTDNNASCERWAALGE--CTKNPEYMVGSAQLPGFCRRSCKVC 296 (296)
Q Consensus 236 i~~~Wi~~~~~~~~~~~~~~C~d~~~~C~~Wa~~ge--C~~n~~~m~~~~~~~~~C~~sC~~C 296 (296)
+++.|+...+ ...|.|....|..|.+.+. |.. -.|.. .||++||+.|
T Consensus 14 ~~~~~~~~~~-------~~~c~di~~~c~~w~~s~~~~r~~-~~f~~------~nc~~Sc~~c 62 (243)
T KOG3371|consen 14 CLFGLMGRKC-------ARKCRDIYKSCDRWKRSDHSSRPI-TEFFD------LNCATSCGNC 62 (243)
T ss_pred ccceeehhhh-------hhhhhhhhhhhhhhhhcCccccch-hHHhh------hhhhhhccCc
Confidence 4556775544 3469999999999999884 333 35566 8999999998
No 31
>PF06822 DUF1235: Protein of unknown function (DUF1235); InterPro: IPR009641 This family contains a number of poxviral proteins, which include Vaccinia virus, A37, the function of which is unknown.
Probab=88.46 E-value=3.2 Score=37.79 Aligned_cols=108 Identities=22% Similarity=0.309 Sum_probs=78.9
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCcceEEeeCCCCcccc-cccccCCcCcccCCCceeEEEEEeecCCCCCcccccCCCCC
Q 022502 98 DAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEP-HYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEE 176 (296)
Q Consensus 98 d~v~~~i~~Ri~~~~~~p~~~~E~~qv~rY~~G~~y~~-H~D~~~~~~~~~~~~~R~~T~liYLND~~~GGeT~Fp~~~~ 176 (296)
..+++.|++.+. -+.-..+.+++..|+.|+-++. +.+ .....++|+-|.....||..++-....
T Consensus 32 ~~i~~EI~kh~~----e~V~~~~~i~i~~f~~~~~~~~~~~~-----------~~~~sr~lvCi~sakkGG~iii~~~~~ 96 (266)
T PF06822_consen 32 KIILSEIEKHIN----EPVYVNNLISIQVFDKGQCYKSRIQD-----------NSSLSRILVCIQSAKKGGCIIIRNTIS 96 (266)
T ss_pred HHHHHHHHHhcC----CeEEecCcEEEEEEeCCCceeccccC-----------CCcceeEEEEeeccccCCeEEEeeccc
Confidence 345666666653 3444567899999999998753 222 246788999999999999877654321
Q ss_pred CCCCCCCCCCCcchhhhcCCeeEecccccEEEeeecCCCCCCCCCccccCCcccccceEEEEEEeecccc
Q 022502 177 PPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVDSF 246 (296)
Q Consensus 177 ~~~~~~~~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~~~ 246 (296)
. ..-.++|..|.||+-- |..-..+.+|++|.-.+++.=+...+.
T Consensus 97 ~-----------------~kkii~~~~~~aVlLs---------pl~~y~Vs~V~~G~~i~i~l~idIPSm 140 (266)
T PF06822_consen 97 N-----------------DKKIITPNQNMAVLLS---------PLADYDVSNVTKGSMIIIVLDIDIPSM 140 (266)
T ss_pred C-----------------CceEEecCCCeEEEec---------chhheEEEEecCCcEEEEEEEeccCcc
Confidence 1 2578999999999974 567788999999998888777765544
No 32
>KOG3959 consensus 2-Oxoglutarate- and iron-dependent dioxygenase-related proteins [General function prediction only]
Probab=85.57 E-value=1.2 Score=39.93 Aligned_cols=113 Identities=21% Similarity=0.285 Sum_probs=61.1
Q ss_pred CCCCcccCCce-eEEeec-----CCcEEEEcCCCCHHHHHHHHHHHhcc-cccceeee--CCCCccc---cccccccccc
Q 022502 24 FSSTAIINPSK-VKQISW-----KPRAFVYEGFLTDLECDHLINLAKSQ-LKRSAVAD--NLSGESK---LSDVRTSSGT 91 (296)
Q Consensus 24 ~~~~~~~~p~k-ve~ls~-----~P~i~ii~nfLs~~Ec~~li~~a~~~-~~~s~v~~--~~~g~~~---~~~~R~s~~~ 91 (296)
.++|..+...+ -|-+|. -|.|.+++||||.+|=..|++..... +.-|.-.. .+-|-.+ .+..|+..
T Consensus 48 ~~gwd~~~e~~d~e~~~~d~~~p~pG~~lie~Fls~~Eea~l~~~~D~~pW~~SQSGRRKQdyGPKvNFkk~Klkt~~-- 125 (306)
T KOG3959|consen 48 SSGWDIIDESTDCESVSTDGSIPIPGLTLIENFLSESEEAKLLNMIDTVPWAQSQSGRRKQDYGPKVNFKKKKLKTDT-- 125 (306)
T ss_pred hcccccccccccccccccCCccccCCeeehhhhhccchHhHHHHHhccCchhhhcccccccccCCccchhhhhhccCc--
Confidence 44555444433 333333 37899999999999999999998652 32222111 1112212 12334433
Q ss_pred ccCCCchHHHHHHHHHHHHhcCCCCCCCCcce--EEeeC--CCCcccccccccCC
Q 022502 92 FIPKGKDAIIAGIEDKIATWTFLPKENGEDIQ--VLRYE--HGQKYEPHYDYFSD 142 (296)
Q Consensus 92 ~l~~~~d~v~~~i~~Ri~~~~~~p~~~~E~~q--v~rY~--~G~~y~~H~D~~~~ 142 (296)
|.. .....+.+.+|+..+-.+.. ..++. =+.|+ +|.--+||.|..+.
T Consensus 126 F~G--~P~~~~~v~rrm~~yp~l~g--fqp~EqCnLeYep~kgsaIdpH~DD~Wi 176 (306)
T KOG3959|consen 126 FVG--MPEYADMVLRRMSEYPVLKG--FQPFEQCNLEYEPVKGSAIDPHQDDMWI 176 (306)
T ss_pred ccC--CchHHHHHHHHhhccchhhc--cCcHHHcCcccccccCCccCccccchhh
Confidence 332 23456666777766532211 11111 23476 48889999998653
No 33
>COG3145 AlkB Alkylated DNA repair protein [DNA replication, recombination, and repair]
Probab=85.24 E-value=16 Score=31.85 Aligned_cols=98 Identities=19% Similarity=0.214 Sum_probs=59.4
Q ss_pred cccccccccCCCchHHHHHHHHHHHHhcCCCCCCCCcceEEeeCCCCcccccccccCCcCcccCCCce--eEEEEEeecC
Q 022502 85 VRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYFSDKVNIVRGGHR--LATVLMYLSD 162 (296)
Q Consensus 85 ~R~s~~~~l~~~~d~v~~~i~~Ri~~~~~~p~~~~E~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~R--~~T~liYLND 162 (296)
+|.+....+.....+....+...+...++.+....|..-+..|.+|..-.+|.|-... ..+ ++++-+
T Consensus 71 y~y~~~~p~~~~p~p~l~~~~~~~~~~~g~~~~~~ea~Lvn~Y~pGd~ig~HqD~~e~-------~~~~~v~slSL---- 139 (194)
T COG3145 71 YRYSLRSPLTGKPWPPLLALFHDLFGAAGYPFEGPEAVLVNRYRPGASIGWHQDKDEE-------DDRPPVASLSL---- 139 (194)
T ss_pred ccccccccCCCCCCCccHHHHHHHHHHhcCCCCChhheeEEeccCCCccccccccccc-------cCCCceEEEec----
Confidence 4444444443322244445566666677888777788999999999999999997543 223 333332
Q ss_pred CCCCcccccCCCCCCCCCCCCCCCCcchhhhcCCeeEecccccEEEee
Q 022502 163 VAKGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFF 210 (296)
Q Consensus 163 ~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~c~~~~~~V~P~~G~alvF~ 210 (296)
|....|-....... +...++.-..|++|++-
T Consensus 140 ---g~~~~F~~~~~~r~--------------~~~~~~~L~~Gdvvvm~ 170 (194)
T COG3145 140 ---GAPCIFRLRGRRRR--------------GPGLRLRLEHGDVVVMG 170 (194)
T ss_pred ---CCCeEEEeccccCC--------------CCceeEEecCCCEEEec
Confidence 22233422111100 12688999999999994
No 34
>PLN02485 oxidoreductase
Probab=83.15 E-value=7.9 Score=36.36 Aligned_cols=48 Identities=13% Similarity=0.033 Sum_probs=32.6
Q ss_pred CeeEecccccEEEeee----cCCCCCCCCCccccCCcccccceEEEEEEeecc
Q 022502 196 GIAVKPRRGDALLFFS----LHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVD 244 (296)
Q Consensus 196 ~~~V~P~~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~ 244 (296)
.+.|+|..|.+||--- .+.+| .-..++|++.+....+||++.-+++-.
T Consensus 237 Wi~V~p~pg~~vVNiGD~L~~~TnG-~~~St~HRVv~~~~~~R~Si~~F~~p~ 288 (329)
T PLN02485 237 WIWAIPIPGTFVCNIGDMLKIWSNG-VYQSTLHRVINNSPKYRVCVAFFYETN 288 (329)
T ss_pred EEECCCCCCcEEEEhHHHHHHHHCC-EeeCCCceecCCCCCCeEEEEEEecCC
Confidence 6899999998887421 11222 234688999865555799998887643
No 35
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=82.11 E-value=13 Score=35.28 Aligned_cols=87 Identities=22% Similarity=0.261 Sum_probs=52.7
Q ss_pred cceEEeeCCCC------cccccccccCCcCcccCCCceeEEEEEeecCCCCCcccccCCCCCCCCCCCCCCCCcchhhhc
Q 022502 121 DIQVLRYEHGQ------KYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAK 194 (296)
Q Consensus 121 ~~qv~rY~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~c~~ 194 (296)
.+++++|.+-. .-.+|.|+. .+|+|+- | ..||=-+....
T Consensus 201 ~lRl~~YPp~~~~~~~~g~~aHTD~g------------~lTlL~Q--d-~v~GLQV~~~g-------------------- 245 (341)
T PLN02984 201 VIRVYRYPQCSNEAEAPGMEVHTDSS------------VISILNQ--D-EVGGLEVMKDG-------------------- 245 (341)
T ss_pred eEEEEeCCCCCCcccccCccCccCCC------------ceEEEEe--C-CCCCeeEeeCC--------------------
Confidence 58899997632 234677752 5777754 3 24663333221
Q ss_pred CCeeEecccccEEEeee----cCCCCCCCCCccccCC-cccccceEEEEEEeec
Q 022502 195 KGIAVKPRRGDALLFFS----LHTNAIPDPVSLHSGC-PVIEGEKWSATKWIHV 243 (296)
Q Consensus 195 ~~~~V~P~~G~alvF~n----~~~~g~~D~~~lH~g~-PV~~G~K~i~~~Wi~~ 243 (296)
..+.|+|..|.+||--- .+.||. -..++|++- +-...+||++.-+++-
T Consensus 246 ~Wv~V~p~pgalVVNiGD~Le~wTNg~-~kSt~HRVv~~~~~~~R~Sia~F~~P 298 (341)
T PLN02984 246 EWFNVKPIANTLVVNLGDMMQVISDDE-YKSVLHRVGKRNKKKERYSICYFVFP 298 (341)
T ss_pred ceEECCCCCCeEEEECChhhhhhcCCe-eeCCCCccccCCCCCCeEEEEEEecC
Confidence 26899999999888531 112221 246889994 3334578888887753
No 36
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=80.70 E-value=13 Score=33.94 Aligned_cols=47 Identities=15% Similarity=0.170 Sum_probs=31.9
Q ss_pred CeeEecccccEEEeee----cCCCCCCCCCccccCCcccccceEEEEEEeec
Q 022502 196 GIAVKPRRGDALLFFS----LHTNAIPDPVSLHSGCPVIEGEKWSATKWIHV 243 (296)
Q Consensus 196 ~~~V~P~~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~ 243 (296)
-+.|+|..|..||--- .+.|| .-..++|++.-....+||++.-+++-
T Consensus 163 Wi~V~p~p~a~vVNiGD~l~~~tng-~~~S~~HRVv~~~~~~R~Sia~F~~p 213 (262)
T PLN03001 163 WLMVPPISDAILIIIADQTEIITNG-NYKSAQHRAIANANKARLSVATFHDP 213 (262)
T ss_pred EEECCCCCCcEEEEccHHHHHHhCC-ccccccceEEcCCCCCEEEEEEEEcC
Confidence 6899999998887421 11222 23468899975555679999888753
No 37
>KOG4176 consensus Uncharacterized conserved protein [Function unknown]
Probab=80.14 E-value=31 Score=32.55 Aligned_cols=117 Identities=19% Similarity=0.293 Sum_probs=73.5
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCcceEEeeCCCCcccccccccCCcCcccCCCceeEEEEEeecCCC--CCcccccCCCC
Q 022502 98 DAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVA--KGGETVFPNAE 175 (296)
Q Consensus 98 d~v~~~i~~Ri~~~~~~p~~~~E~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~--~GGeT~Fp~~~ 175 (296)
.++++-|.+|+-.|--+|. .-+.+-|..|++|+.-.+|+|... .. |-...+.+|++.. -|=....-...
T Consensus 189 Ps~~~~ii~rlv~~~~ip~-~pd~~~iN~Ye~G~~i~ph~~~~~-------F~-~Pi~slS~lSe~~m~Fg~~~~~~~~~ 259 (323)
T KOG4176|consen 189 PSLFKSIIDRLVSWRVIPE-RPDQCTINFYEPGDGIPPHIDHSA-------FL-DPISSLSFLSECTMEFGHGLLSDNIG 259 (323)
T ss_pred chHHHHHHHHhhhhccCCC-CCCeeEEEeeCCCCCCCCCCChHH-------hc-CceEEEEeecceeEEecccccccCcc
Confidence 3577888888888877776 456788999999999999996532 22 3444555677752 12222211110
Q ss_pred CCCCCCCCCCCCcchhhhcCCeeEecccccEEEeeecCCCCCCCCCccccCCcccccceEEEEEEeecccc
Q 022502 176 EPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVDSF 246 (296)
Q Consensus 176 ~~~~~~~~~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~~~ 246 (296)
. .. +-+++.-+.|.+++-.+...| -..|+++|+. .|.+..++.+.++.
T Consensus 260 ~------------~~----g~~s~p~~~g~~lvi~~~~ad-----~~~~~~~~~~--~kRisitfrki~~~ 307 (323)
T KOG4176|consen 260 N------------FR----GSLSLPLRYGSVLVIRGRSAD-----VAPHCIRPSR--NKRISITFRKIRPD 307 (323)
T ss_pred c------------cc----cccccccccCeEEEeCCCccc-----ccccccCCCC--CceEEEEEEEeccC
Confidence 0 00 125666677887777643322 5779999843 57788888877764
No 38
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=77.82 E-value=19 Score=33.96 Aligned_cols=88 Identities=20% Similarity=0.243 Sum_probs=53.3
Q ss_pred cceEEeeCCCC------cccccccccCCcCcccCCCceeEEEEEeecCCCCCcccccCCCCCCCCCCCCCCCCcchhhhc
Q 022502 121 DIQVLRYEHGQ------KYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAK 194 (296)
Q Consensus 121 ~~qv~rY~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~c~~ 194 (296)
.+++.+|.+-. ...+|.|.. .+|+|+ .|...||=-++.+.
T Consensus 191 ~lrl~~YP~~~~~~~~~g~~~HTD~g------------~lTlL~--qd~~v~GLQV~~~g-------------------- 236 (337)
T PLN02639 191 HMAVNYYPPCPEPELTYGLPAHTDPN------------ALTILL--QDQQVAGLQVLKDG-------------------- 236 (337)
T ss_pred EEEEEcCCCCCCcccccCCCCCcCCC------------ceEEEE--ecCCcCceEeecCC--------------------
Confidence 57888888631 134676652 577764 34334563334321
Q ss_pred CCeeEecccccEEEeee----cCCCCCCCCCccccCCcccccceEEEEEEeec
Q 022502 195 KGIAVKPRRGDALLFFS----LHTNAIPDPVSLHSGCPVIEGEKWSATKWIHV 243 (296)
Q Consensus 195 ~~~~V~P~~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~ 243 (296)
..+.|+|..|.+||--- .+.|| .-..++|++-.....+||++.-+++-
T Consensus 237 ~Wi~V~p~pg~lVVNiGD~L~~~TNG-~~kSt~HRVv~~~~~~R~Sia~F~~p 288 (337)
T PLN02639 237 KWVAVNPHPGAFVINIGDQLQALSNG-RYKSVWHRAVVNTDKERMSVASFLCP 288 (337)
T ss_pred eEEeccCCCCeEEEechhHHHHHhCC-eeeccCcccccCCCCCEEEEEEEecC
Confidence 26899999999888421 11222 23468999854344689999888864
No 39
>PHA02985 hypothetical protein; Provisional
Probab=77.41 E-value=17 Score=33.06 Aligned_cols=106 Identities=18% Similarity=0.182 Sum_probs=75.6
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCcceEEeeCCCCcccccccccCCcCcccCCCceeEEEEEeecCCCCCcccccCCCCCC
Q 022502 98 DAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEP 177 (296)
Q Consensus 98 d~v~~~i~~Ri~~~~~~p~~~~E~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~~GGeT~Fp~~~~~ 177 (296)
..+++.|++++. .++-..+.+++..|+.|+.|.. . ...++..+|+-+.....||..+--+-...
T Consensus 39 ~~I~~EI~~~i~----E~V~~~n~i~i~~f~~~~~~~~-~-----------~~~~~SkilICiqsAkkGG~iIi~~~~~~ 102 (271)
T PHA02985 39 KIILDEIEQYID----ETVLVKNLISIEVFNKKKKYYQ-N-----------IPSRLSKIIICIQSAKKGGCIIIINNITN 102 (271)
T ss_pred hHHHHHHHHhcC----CeEEecceeEEEEEcCCcceEe-e-----------CCCCceeEEEEEeecccCCEEEEeccccc
Confidence 456666776663 3333457799999999866532 1 13567889999999999998776332110
Q ss_pred CCCCCCCCCCcchhhhcCCeeEecccccEEEeeecCCCCCCCCCccccCCcccccceEEEEEEeeccc
Q 022502 178 PRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVDS 245 (296)
Q Consensus 178 ~~~~~~~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~~ 245 (296)
.--.++|..|.||+-- |.+-..+.+|.+|.-.++..=+...+
T Consensus 103 -----------------~K~ii~~~~n~aVlLS---------PLs~Y~Vs~V~kGsli~i~l~idIPS 144 (271)
T PHA02985 103 -----------------NKKIITLNINHIIILS---------PLSKYTVSKVSKGSLIIIVLDIDIPS 144 (271)
T ss_pred -----------------CceEEecCCCeEEEec---------chhhceEEEecCCcEEEEEEEecCCc
Confidence 2467999999999974 46788899999999887777665544
No 40
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=77.17 E-value=16 Score=34.77 Aligned_cols=88 Identities=19% Similarity=0.129 Sum_probs=54.5
Q ss_pred cceEEeeCCC------CcccccccccCCcCcccCCCceeEEEEEeecCCCCCcccccCCCCCCCCCCCCCCCCcchhhhc
Q 022502 121 DIQVLRYEHG------QKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAK 194 (296)
Q Consensus 121 ~~qv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~c~~ 194 (296)
.+++.+|.+- -.-.+|.|.. .+|+| +.|...||=-+....
T Consensus 204 ~lRl~~YPp~~~~~~~~g~~~HTD~g------------~lTlL--~qd~~v~GLQV~~~g-------------------- 249 (348)
T PLN00417 204 DTRFNMYPPCPRPDKVIGVKPHADGS------------AFTLL--LPDKDVEGLQFLKDG-------------------- 249 (348)
T ss_pred eeeeeecCCCCCcccccCCcCccCCC------------ceEEE--EecCCCCceeEeECC--------------------
Confidence 3789999752 1234677752 57766 444345663333221
Q ss_pred CCeeEecccccEEEeee----cCCCCCCCCCccccCCcccccceEEEEEEeec
Q 022502 195 KGIAVKPRRGDALLFFS----LHTNAIPDPVSLHSGCPVIEGEKWSATKWIHV 243 (296)
Q Consensus 195 ~~~~V~P~~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~ 243 (296)
..+.|+|..|.+||--- .+.+| .-..++|++-+...++||++.-+++-
T Consensus 250 ~Wi~V~p~pg~lVVNiGD~Le~~Tng-~~kSt~HRVv~~~~~~R~Si~fF~~P 301 (348)
T PLN00417 250 KWYKAPIVPDTILINVGDQMEIMSNG-IYKSPVHRVVTNREKERISVATFCIP 301 (348)
T ss_pred eEEECCCCCCcEEEEcChHHHHHhCC-eecccceEEecCCCCCEEEEEEEecC
Confidence 26899999999887421 11222 23578999976556789999888864
No 41
>PF10057 DUF2294: Uncharacterized conserved protein (DUF2294); InterPro: IPR018745 This domain of unknown function is found in a family of hypothetical bacterial proteins with no known function. It is also found at the C terminus of proteins provisionally annotated as response regulators.
Probab=77.00 E-value=7 Score=31.11 Aligned_cols=90 Identities=21% Similarity=0.197 Sum_probs=58.7
Q ss_pred CCchhhhHHHHHHHHhhhhhhccCCCCcccCCceeEEeecCCc-EEEEcCCCCHHHHHHHHHHHhcccccceeeeCCCCc
Q 022502 1 MSPTRLSLNFFFLLSFSLLIRKSFSSTAIINPSKVKQISWKPR-AFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGE 79 (296)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~kve~ls~~P~-i~ii~nfLs~~Ec~~li~~a~~~~~~s~v~~~~~g~ 79 (296)
|.||+-.+---+.-.+.++.++.++.. |..+...=.++. |+.+.++||+.|-.-+-. . .|.
T Consensus 1 m~~tk~~lE~~is~~i~k~~ke~~GkG----P~~i~~~i~~~~iiv~l~g~LTp~Ek~L~~~-~-------------~g~ 62 (118)
T PF10057_consen 1 MKKTKGELEQEISNAIRKFYKEYFGKG----PKSIKVTISDDMIIVRLEGFLTPAEKFLAET-E-------------EGR 62 (118)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHhCCC----CcEEEEEEECCEEEEEEECCCCHHHHHHHhC-c-------------chH
Confidence 788888888888888999999999887 666665434444 566999999998654332 0 122
Q ss_pred ccccccccccccccCCCchHHHHHHHHHHHHhcCCC
Q 022502 80 SKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLP 115 (296)
Q Consensus 80 ~~~~~~R~s~~~~l~~~~d~v~~~i~~Ri~~~~~~p 115 (296)
......|+.- + ......+...|..++|..
T Consensus 63 ~lv~~~R~~l---~----~~~~~~l~~~ie~i~g~~ 91 (118)
T PF10057_consen 63 ELVKQVRTSL---I----ESLKPELKEMIEEILGVK 91 (118)
T ss_pred HHHHHHHHHH---H----HHHHHHHHHHHHHHhCCe
Confidence 2233445431 1 234456667777777764
No 42
>PF14033 DUF4246: Protein of unknown function (DUF4246)
Probab=76.87 E-value=9.2 Score=38.27 Aligned_cols=100 Identities=17% Similarity=0.192 Sum_probs=57.2
Q ss_pred eeCCCCcccccccccCCcCcccCCCceeEEEEEeecCCC-CCcccccCCCCC-CC-------CCCC------CCCCCcch
Q 022502 126 RYEHGQKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVA-KGGETVFPNAEE-PP-------RRRT------PATNDDLS 190 (296)
Q Consensus 126 rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~-~GGeT~Fp~~~~-~~-------~~~~------~~~~~~~~ 190 (296)
.|..| .||+++.. +.+-.+|.|+|+.... ....+.|-.... .. .|.+ +-.-....
T Consensus 359 ~Y~gg---~WHvEG~l-------NE~IvATalYyyd~eNIT~s~L~FR~~~~d~~~~~~~~~~q~~~~~~~~~~g~~~~~ 428 (501)
T PF14033_consen 359 EYPGG---SWHVEGQL-------NEHIVATALYYYDSENITESRLSFRQQTDDPDLDQELSYEQDDHEWLERVFGIEDGG 428 (501)
T ss_pred CCCCC---CccccCCc-------ccceeEEEEEEEecCccCCCceEeeeeccCccccccccccccchhHHHHhcCCCCCc
Confidence 45544 68998854 3577899999996432 333455533221 10 0100 00000001
Q ss_pred hhhcCCeeEecccccEEEeeecCCCCCCCCCccccCCcc------cccceEEEEEEeecc
Q 022502 191 ECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPV------IEGEKWSATKWIHVD 244 (296)
Q Consensus 191 ~c~~~~~~V~P~~G~alvF~n~~~~g~~D~~~lH~g~PV------~~G~K~i~~~Wi~~~ 244 (296)
.|-+.-=+|.-+.|++|+|+|+ ..|.+.|. ..|.+-+++-|+-..
T Consensus 429 ~~~q~~Gsv~~~~gr~i~fPN~---------~qhrv~~f~L~D~tkpGhrkil~lfLvDP 479 (501)
T PF14033_consen 429 PAVQELGSVETKEGRLIAFPNT---------LQHRVSPFELADPTKPGHRKILALFLVDP 479 (501)
T ss_pred cceEEcCcEEccCCcEEeccch---------hhhccCCccccCCCCCCcEEEEEEEecCC
Confidence 2222233688899999999995 56777654 469888998887443
No 43
>PLN02904 oxidoreductase
Probab=75.82 E-value=23 Score=33.80 Aligned_cols=87 Identities=15% Similarity=0.156 Sum_probs=53.0
Q ss_pred cceEEeeCCCC------cccccccccCCcCcccCCCceeEEEEEeecCCCCCcccccCCCCCCCCCCCCCCCCcchhhhc
Q 022502 121 DIQVLRYEHGQ------KYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAK 194 (296)
Q Consensus 121 ~~qv~rY~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~c~~ 194 (296)
.+++.+|.+-. .-.+|.|. -.+|+|+ .|+ ||=-+....+
T Consensus 209 ~lrl~~YPp~p~~~~~~g~~~HtD~------------g~lTlL~--qd~--~GLQV~~~~g------------------- 253 (357)
T PLN02904 209 VMAVNCYPACPEPEIALGMPPHSDF------------GSLTILL--QSS--QGLQIMDCNK------------------- 253 (357)
T ss_pred EEEeeecCCCCCcccccCCcCccCC------------CceEEEe--cCC--CeeeEEeCCC-------------------
Confidence 47888898621 23367775 2578885 453 5533333211
Q ss_pred CCeeEecccccEEEeee----cCCCCCCCCCccccCCcccccceEEEEEEeec
Q 022502 195 KGIAVKPRRGDALLFFS----LHTNAIPDPVSLHSGCPVIEGEKWSATKWIHV 243 (296)
Q Consensus 195 ~~~~V~P~~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~ 243 (296)
..+.|+|..|.+||--- .+.+| .-..++|++-.....+||++.-+++-
T Consensus 254 ~Wi~V~p~pgalVVNiGD~Le~~TNG-~~kSt~HRVv~~~~~~R~Si~~F~~p 305 (357)
T PLN02904 254 NWVCVPYIEGALIVQLGDQVEVMSNG-IYKSVVHRVTVNKDYKRLSFASLHSL 305 (357)
T ss_pred CEEECCCCCCeEEEEccHHHHHHhCC-eeeccCCcccCCCCCCEEEEEEeecC
Confidence 26899999999888421 01122 23578999964445689999888753
No 44
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase
Probab=75.47 E-value=28 Score=32.67 Aligned_cols=89 Identities=17% Similarity=0.200 Sum_probs=55.2
Q ss_pred cceEEeeCCCC------cccccccccCCcCcccCCCceeEEEEEeecCCCCCcccccCCCCCCCCCCCCCCCCcchhhhc
Q 022502 121 DIQVLRYEHGQ------KYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAK 194 (296)
Q Consensus 121 ~~qv~rY~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~c~~ 194 (296)
.+++.+|.+-. ...+|.|.. .+|+| +.|...||=-+....
T Consensus 159 ~lRl~~YPp~~~~~~~~G~~~HTD~g------------~lTlL--~qd~~v~GLQV~~~g-------------------- 204 (321)
T PLN02299 159 GTKVSNYPPCPKPDLVKGLRAHTDAG------------GIILL--FQDDKVSGLQLLKDG-------------------- 204 (321)
T ss_pred eeeeEecCCCCCcccccCccCccCCC------------eEEEE--EecCCCCCcCcccCC--------------------
Confidence 37889998521 244777762 57777 454344563333221
Q ss_pred CCeeEecccccEEEeee----cCCCCCCCCCccccCCcccccceEEEEEEeecc
Q 022502 195 KGIAVKPRRGDALLFFS----LHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVD 244 (296)
Q Consensus 195 ~~~~V~P~~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~ 244 (296)
..+.|+|..|.+||--- ...||. -...+|++.....++||++.-+++-.
T Consensus 205 ~Wi~V~p~pg~lvVNiGD~l~~~Tng~-~kS~~HRVv~~~~~~R~Si~~F~~p~ 257 (321)
T PLN02299 205 EWVDVPPMRHSIVVNLGDQLEVITNGK-YKSVMHRVVAQTDGNRMSIASFYNPG 257 (321)
T ss_pred eEEECCCCCCeEEEEeCHHHHHHhCCc-eecccceeecCCCCCEEEEEEEecCC
Confidence 26889999988887421 112332 35689999755567899998888643
No 45
>PLN02216 protein SRG1
Probab=74.04 E-value=19 Score=34.29 Aligned_cols=47 Identities=21% Similarity=0.213 Sum_probs=31.2
Q ss_pred CeeEecccccEEEeee----cCCCCCCCCCccccCCcccccceEEEEEEeec
Q 022502 196 GIAVKPRRGDALLFFS----LHTNAIPDPVSLHSGCPVIEGEKWSATKWIHV 243 (296)
Q Consensus 196 ~~~V~P~~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~ 243 (296)
.+.|+|..|..||--- ...|| .-..++|++-.....+|+++.-+++-
T Consensus 258 Wi~V~p~pgalvVNiGD~L~~~TNG-~~kS~~HRVv~~~~~~R~Si~~F~~P 308 (357)
T PLN02216 258 WVSVKPLPNALVVNVGDILEIITNG-TYRSIEHRGVVNSEKERLSVATFHNT 308 (357)
T ss_pred EEECCCCCCeEEEEcchhhHhhcCC-eeeccCceeecCCCCCEEEEEEEecC
Confidence 6899999998887421 11222 23568899854445679888887753
No 46
>COG4340 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=73.43 E-value=5.9 Score=34.31 Aligned_cols=64 Identities=22% Similarity=0.336 Sum_probs=38.3
Q ss_pred EEEeecCCC--CCcccccCCCCCCCCCCCCCCCCcchhhhcCCeeEecccccEEEeeecCCCCCCCCCccccCCcccccc
Q 022502 156 VLMYLSDVA--KGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGE 233 (296)
Q Consensus 156 ~liYLND~~--~GGeT~Fp~~~~~~~~~~~~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~ 233 (296)
+.|.+-|-+ .||||..+..+... .+..---..|.+++-. |++.+|.+||+..-+
T Consensus 148 I~I~~vDR~NI~gGet~lY~~~~~~----------------p~f~kvl~pGe~~~l~--------Dh~~~H~~tpi~p~t 203 (226)
T COG4340 148 IIIMLVDRQNIDGGETDLYAPDGAS----------------PGFFKVLAPGEAVFLD--------DHRVLHGVTPIVPST 203 (226)
T ss_pred EEEEEeeeccccCceEEEEccCCCC----------------cceEEeccCCcEEEec--------cchhcccccceeccc
Confidence 445555544 79999887643211 1344444567777653 789999999987431
Q ss_pred --eEEEEEEeec
Q 022502 234 --KWSATKWIHV 243 (296)
Q Consensus 234 --K~i~~~Wi~~ 243 (296)
+-.+.-|+-.
T Consensus 204 ~~q~g~mdvfvl 215 (226)
T COG4340 204 SRQRGAMDVFVL 215 (226)
T ss_pred hhhccceeEEEE
Confidence 1145556543
No 47
>COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=72.21 E-value=17 Score=33.65 Aligned_cols=98 Identities=22% Similarity=0.227 Sum_probs=60.9
Q ss_pred ccccccccCCcCcccCCCceeEEEEEeecCCC-CCccccc-CCCCCCCCCCCCCCCCcchhhh-cCCeeEecccccEEEe
Q 022502 133 YEPHYDYFSDKVNIVRGGHRLATVLMYLSDVA-KGGETVF-PNAEEPPRRRTPATNDDLSECA-KKGIAVKPRRGDALLF 209 (296)
Q Consensus 133 y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~-~GGeT~F-p~~~~~~~~~~~~~~~~~~~c~-~~~~~V~P~~G~alvF 209 (296)
=.||.|+.... .+..-...+.+=|-|.. +-|.|.+ |.+...... +++...+.-. +..+-|.-.+||+|+|
T Consensus 133 t~~HqD~~~~~----~~~~~lV~~wiAl~d~~~dnGat~vvPgSH~~~~~---~~r~d~~~y~~~~~~pv~lekGDallF 205 (299)
T COG5285 133 TRWHQDYPLVS----PGYPALVNAWIALCDFTEDNGATLVVPGSHKWDVI---PERPDHETYLERNAVPVELEKGDALLF 205 (299)
T ss_pred ccccccccccc----CCccceEEEEEeccccccccCceEEEecccccccC---CCCCCccchhhhcceeeeecCCCEEEE
Confidence 46899965431 23455677888888874 5677765 665432110 1111111111 2367788899999999
Q ss_pred eecCCCCCCCCCccccCCcccccceEEEEEEeecccc
Q 022502 210 FSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVDSF 246 (296)
Q Consensus 210 ~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~~~ 246 (296)
. +.++|++---+.+.+..+.+......+
T Consensus 206 ~---------~~L~HaA~aNrT~~~R~A~~~~~~~~~ 233 (299)
T COG5285 206 N---------GSLWHAAGANRTSADRVALTLQFTVSF 233 (299)
T ss_pred c---------chhhhhhhcCCCCcccceEEEEEeecc
Confidence 4 589999999888876666665555554
No 48
>PLN02276 gibberellin 20-oxidase
Probab=71.52 E-value=27 Score=33.35 Aligned_cols=88 Identities=26% Similarity=0.280 Sum_probs=53.9
Q ss_pred CcceEEeeCCCC------cccccccccCCcCcccCCCceeEEEEEeecCCCCCcccccCCCCCCCCCCCCCCCCcchhhh
Q 022502 120 EDIQVLRYEHGQ------KYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECA 193 (296)
Q Consensus 120 E~~qv~rY~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~c~ 193 (296)
.-+++.+|.+.. .-.+|.|+ -.+|+|+- | ..||=-++...
T Consensus 206 ~~lrl~~YP~~~~~~~~~g~~~HTD~------------g~lTlL~Q--d-~v~GLQV~~~g------------------- 251 (361)
T PLN02276 206 SIMRCNYYPPCQEPELTLGTGPHCDP------------TSLTILHQ--D-QVGGLQVFVDN------------------- 251 (361)
T ss_pred ceeeeEeCCCCCCcccccCCccccCC------------ceeEEEEe--c-CCCceEEEECC-------------------
Confidence 347888887531 13466665 25777753 4 35664444321
Q ss_pred cCCeeEecccccEEEeee----cCCCCCCCCCccccCCcccccceEEEEEEeec
Q 022502 194 KKGIAVKPRRGDALLFFS----LHTNAIPDPVSLHSGCPVIEGEKWSATKWIHV 243 (296)
Q Consensus 194 ~~~~~V~P~~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~ 243 (296)
..+.|+|..|.+||--- .+.+| .-..++|++-.-...+||++.-+++-
T Consensus 252 -~Wi~V~p~pgalVVNiGD~L~~~TNG-~~kSt~HRVv~~~~~~R~Sia~F~~P 303 (361)
T PLN02276 252 -KWRSVRPRPGALVVNIGDTFMALSNG-RYKSCLHRAVVNSERERRSLAFFLCP 303 (361)
T ss_pred -EEEEcCCCCCeEEEEcHHHHHHHhCC-ccccccceeecCCCCCEEEEEEEecC
Confidence 26899999999988531 11222 23578999864445679988888753
No 49
>TIGR00568 alkb DNA alkylation damage repair protein AlkB. Proteins in this family have an as of yet undetermined function in the repair of alkylation damage to DNA. Alignment and family designation based on phylogenomic analysis of Jonathan A. Eisen (PhD Thesis, Stanford University, 1999).
Probab=71.43 E-value=42 Score=28.52 Aligned_cols=41 Identities=22% Similarity=0.268 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCcceEEeeCCCCcccccccc
Q 022502 99 AIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDY 139 (296)
Q Consensus 99 ~v~~~i~~Ri~~~~~~p~~~~E~~qv~rY~~G~~y~~H~D~ 139 (296)
+.+..|.++|++..+++....+..-|..|.+|+.-.+|.|.
T Consensus 74 ~~L~~L~~~v~~~~g~~~~~~n~~LvN~Y~~Gd~mg~H~D~ 114 (169)
T TIGR00568 74 QDLGDLCERVATAAGFPDFQPDACLVNRYAPGATLSLHQDR 114 (169)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCEEEEEeecCCCcccccccc
Confidence 67888999999888775445567788899999999999995
No 50
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=70.89 E-value=20 Score=33.99 Aligned_cols=88 Identities=24% Similarity=0.264 Sum_probs=53.9
Q ss_pred cceEEeeCCC------CcccccccccCCcCcccCCCceeEEEEEeecCCCCCcccccCCCCCCCCCCCCCCCCcchhhhc
Q 022502 121 DIQVLRYEHG------QKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAK 194 (296)
Q Consensus 121 ~~qv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~c~~ 194 (296)
.+++.+|.+- -.-.+|.|. -.+|+|+- | ..||=-++...
T Consensus 198 ~lrl~~YPp~~~~~~~~G~~~HtD~------------g~lTlL~Q--d-~v~GLQV~~~g-------------------- 242 (348)
T PLN02912 198 HMAINYYPPCPQPELTYGLPGHKDA------------NLITVLLQ--D-EVSGLQVFKDG-------------------- 242 (348)
T ss_pred eeeeeecCCCCChhhcCCcCCCcCC------------CceEEEEE--C-CCCceEEEECC--------------------
Confidence 4788889862 123467765 25777743 4 34664444321
Q ss_pred CCeeEecccccEEEeee----cCCCCCCCCCccccCCcccccceEEEEEEeecc
Q 022502 195 KGIAVKPRRGDALLFFS----LHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVD 244 (296)
Q Consensus 195 ~~~~V~P~~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~ 244 (296)
..+.|+|..|.+||--- .+.|| .-..++|++-....++||++.-+++-.
T Consensus 243 ~Wi~V~p~pgalvVNiGD~L~~~TNG-~~kSt~HRVv~~~~~~R~Sia~F~~p~ 295 (348)
T PLN02912 243 KWIAVNPIPNTFIVNLGDQMQVISND-KYKSVLHRAVVNTDKERISIPTFYCPS 295 (348)
T ss_pred cEEECCCcCCeEEEEcCHHHHHHhCC-EEEcccccccCCCCCCEEEEEEEecCC
Confidence 26899999998887421 11222 234689998644456899998888643
No 51
>PLN02403 aminocyclopropanecarboxylate oxidase
Probab=70.87 E-value=18 Score=33.75 Aligned_cols=48 Identities=13% Similarity=0.205 Sum_probs=31.0
Q ss_pred CeeEeccccc-EEEeee----cCCCCCCCCCccccCCcccccceEEEEEEeecc
Q 022502 196 GIAVKPRRGD-ALLFFS----LHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVD 244 (296)
Q Consensus 196 ~~~V~P~~G~-alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~ 244 (296)
.+.|.|..|. .||--- ...+| .-..++|++-....++||++.-+++-.
T Consensus 201 Wi~V~p~p~~~lvVNvGD~L~~~Tng-~~~S~~HRVv~~~~~~R~Si~~F~~p~ 253 (303)
T PLN02403 201 WVPIPPSKNNTIFVNTGDQLEVLSNG-RYKSTLHRVMADKNGSRLSIATFYNPA 253 (303)
T ss_pred EEECCCCCCCEEEEEehHHHHHHhCC-eeecccceeecCCCCCEEEEEEEEcCC
Confidence 6889999864 444210 11222 235688999866667899998888643
No 52
>PLN02365 2-oxoglutarate-dependent dioxygenase
Probab=70.85 E-value=23 Score=32.77 Aligned_cols=47 Identities=15% Similarity=0.012 Sum_probs=31.7
Q ss_pred CeeEecccccEEEeee----cCCCCCCCCCccccCCcccccceEEEEEEeec
Q 022502 196 GIAVKPRRGDALLFFS----LHTNAIPDPVSLHSGCPVIEGEKWSATKWIHV 243 (296)
Q Consensus 196 ~~~V~P~~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~ 243 (296)
.+.|.|..|.+||--- .+.|| .-..++|++......+||++.-+++-
T Consensus 199 Wi~V~p~pga~vVNiGD~l~~~TNG-~~~St~HRVv~~~~~~R~Si~~F~~p 249 (300)
T PLN02365 199 FVPVDPLPGTLLVNLGDVATAWSNG-RLCNVKHRVQCKEATMRISIASFLLG 249 (300)
T ss_pred EEecCCCCCeEEEEhhHHHHHHhCC-ceecccceeEcCCCCCEEEEEEEecC
Confidence 6899999999888321 11222 23578999975445579998888753
No 53
>KOG4459 consensus Membrane-associated proteoglycan Leprecan [Function unknown]
Probab=70.17 E-value=0.9 Score=44.28 Aligned_cols=74 Identities=23% Similarity=0.299 Sum_probs=57.8
Q ss_pred CceeEEEEEeecCCCCCcccccCCCCCCCCCCCCCCCCcchhhhcCCeeEecccccEEEeeecCCCCCCCCCccccCCcc
Q 022502 150 GHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPV 229 (296)
Q Consensus 150 ~~R~~T~liYLND~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~D~~~lH~g~PV 229 (296)
+-+....++|+||+++||+..|...+..+ ....++|+-|+.+-|.+- ....|...+|
T Consensus 364 ~~~~~~a~~~~~dd~~~~el~~t~~d~~t----------------~~a~~k~~~~re~~~~~g-------~e~~~~~~~~ 420 (471)
T KOG4459|consen 364 TELDYFALLYLNDDFEGGELLFTEPDAKT----------------YTAISKPECGRECAFSSG-------AENPHGVKAV 420 (471)
T ss_pred HHHHhhccHhhcCccccccceecCCcccc----------------hhhccccccccchhhhcc-------ccCccchhhh
Confidence 45678899999999999999996543322 257799999999999652 2456999999
Q ss_pred cccceEEEEEEeecccc
Q 022502 230 IEGEKWSATKWIHVDSF 246 (296)
Q Consensus 230 ~~G~K~i~~~Wi~~~~~ 246 (296)
++|..=.+.-|....+-
T Consensus 421 ~kg~e~~~~lw~~~~~~ 437 (471)
T KOG4459|consen 421 TKGLECAVALWPTLAPL 437 (471)
T ss_pred hhhhHHhhhcCcccChh
Confidence 99988778889877654
No 54
>PLN02947 oxidoreductase
Probab=68.56 E-value=41 Score=32.34 Aligned_cols=87 Identities=18% Similarity=0.222 Sum_probs=52.3
Q ss_pred cceEEeeCCCC------cccccccccCCcCcccCCCceeEEEEEeecCCCCCcccccCCCCCCCCCCCCCCCCcchhhhc
Q 022502 121 DIQVLRYEHGQ------KYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAK 194 (296)
Q Consensus 121 ~~qv~rY~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~c~~ 194 (296)
-+++.+|.+.. ...+|.|. -.+|+|+- ++ .||=-++.+.
T Consensus 226 ~lrln~YPp~p~~~~~~G~~~HTD~------------g~lTlL~Q-d~--v~GLQV~~~g-------------------- 270 (374)
T PLN02947 226 MMVVNCYPACPEPELTLGMPPHSDY------------GFLTLLLQ-DE--VEGLQIMHAG-------------------- 270 (374)
T ss_pred eeeeecCCCCCCcccccCCCCccCC------------CceEEEEe-cC--CCCeeEeECC--------------------
Confidence 46777887631 23456665 36788855 33 4564344321
Q ss_pred CCeeEecccccEEEeee----cCCCCCCCCCccccCCcccccceEEEEEEeec
Q 022502 195 KGIAVKPRRGDALLFFS----LHTNAIPDPVSLHSGCPVIEGEKWSATKWIHV 243 (296)
Q Consensus 195 ~~~~V~P~~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~ 243 (296)
..+.|+|..|.+||--- ...||. -...+|++-.....+|+++.-+++-
T Consensus 271 ~Wi~V~p~pga~VVNvGD~Lq~~SNG~-~kS~~HRVv~~~~~~R~Sia~F~~P 322 (374)
T PLN02947 271 RWVTVEPIPGSFVVNVGDHLEIFSNGR-YKSVLHRVRVNSTKPRISVASLHSL 322 (374)
T ss_pred EEEeCCCCCCeEEEEeCceeeeeeCCE-EeccccccccCCCCCEEEEEEEecC
Confidence 26889999988777321 112232 2468899964445679998888754
No 55
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase
Probab=67.76 E-value=29 Score=33.13 Aligned_cols=48 Identities=15% Similarity=0.104 Sum_probs=32.8
Q ss_pred CeeEecccccEEEeee----cCCCCCCCCCccccCCcccccceEEEEEEeecc
Q 022502 196 GIAVKPRRGDALLFFS----LHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVD 244 (296)
Q Consensus 196 ~~~V~P~~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~ 244 (296)
.+.|+|..|.+||=-- ...||. -..++|++-....++||++.-+++-.
T Consensus 244 Wi~Vpp~pgalVVNiGD~L~~~TNG~-~kSt~HRVv~~~~~~R~Si~~F~~P~ 295 (358)
T PLN02515 244 WITVQPVEGAFVVNLGDHGHYLSNGR-FKNADHQAVVNSNCSRLSIATFQNPA 295 (358)
T ss_pred EEECCCCCCeEEEEccHHHHHHhCCe-eeeecceEECCCCCCEEEEEEEecCC
Confidence 6889999998887421 112332 35789998655557899998888643
No 56
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=66.91 E-value=34 Score=32.63 Aligned_cols=46 Identities=15% Similarity=0.152 Sum_probs=30.8
Q ss_pred CeeEecccccEEEeee----cCCCCCCCCCccccCCcccccceEEEEEEee
Q 022502 196 GIAVKPRRGDALLFFS----LHTNAIPDPVSLHSGCPVIEGEKWSATKWIH 242 (296)
Q Consensus 196 ~~~V~P~~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~ 242 (296)
.+.|+|..|..||--- ...|| .-...+|++-.....+||++.-+++
T Consensus 260 Wi~V~p~pgalVVNiGD~L~~~SNG-~~kS~~HRVv~~~~~~R~Sia~F~~ 309 (361)
T PLN02758 260 WVPVHPVPNALVINIGDTLEVLTNG-KYKSVEHRAVTNKEKDRLSIVTFYA 309 (361)
T ss_pred EEeCCCCCCeEEEEccchhhhhcCC-eeecccceeecCCCCCEEEEEEEec
Confidence 6889999998887431 11222 2357899997544457888887775
No 57
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=66.89 E-value=49 Score=31.26 Aligned_cols=48 Identities=19% Similarity=0.109 Sum_probs=32.4
Q ss_pred CeeEecccccEEEeee----cCCCCCCCCCccccCCcccccceEEEEEEeecc
Q 022502 196 GIAVKPRRGDALLFFS----LHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVD 244 (296)
Q Consensus 196 ~~~V~P~~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~ 244 (296)
.+.|+|..|..||=-- .+.|| .-..++|++......+||++.-+++-.
T Consensus 242 Wi~V~p~pg~~vVNiGD~L~~~Tng-~~~St~HRVv~~~~~~R~Si~~F~~P~ 293 (345)
T PLN02750 242 WIPVKPIPDAFIINIGNCMQVWTND-LYWSAEHRVVVNSQKERFSIPFFFFPS 293 (345)
T ss_pred EEEccCCCCeEEEEhHHHHHHHhCC-eeecccceeccCCCCCEEEEEEeecCC
Confidence 6899999998887310 11222 235689999755556899988887543
No 58
>PLN02997 flavonol synthase
Probab=65.66 E-value=25 Score=33.11 Aligned_cols=88 Identities=16% Similarity=0.108 Sum_probs=53.7
Q ss_pred cceEEeeCCCC------cccccccccCCcCcccCCCceeEEEEEeecCCCCCcccccCCCCCCCCCCCCCCCCcchhhhc
Q 022502 121 DIQVLRYEHGQ------KYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAK 194 (296)
Q Consensus 121 ~~qv~rY~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~c~~ 194 (296)
-+++.+|.+-. .-.+|.|. -.+|+|+- | ..||=-+..+.
T Consensus 184 ~lRl~~YP~~~~~~~~~g~~~HTD~------------g~lTlL~Q--d-~v~GLQV~~~g-------------------- 228 (325)
T PLN02997 184 VLRVNFYPPTQDTELVIGAAAHSDM------------GAIALLIP--N-EVPGLQAFKDE-------------------- 228 (325)
T ss_pred eeeeecCCCCCCcccccCccCccCC------------CceEEEec--C-CCCCEEEeECC--------------------
Confidence 47888898631 24567775 25777743 3 24663333321
Q ss_pred CCeeEecccccEEEeee----cCCCCCCCCCccccCCcccccceEEEEEEeecc
Q 022502 195 KGIAVKPRRGDALLFFS----LHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVD 244 (296)
Q Consensus 195 ~~~~V~P~~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~ 244 (296)
..+.|+|..|.+||--- ...|| .-..++|++..-...+||++.-+++-.
T Consensus 229 ~Wi~V~p~pgalvVNiGD~Le~~TNG-~~kSt~HRVv~~~~~~R~Si~fF~~P~ 281 (325)
T PLN02997 229 QWLDLNYINSAVVVIIGDQLMRMTNG-RFKNVLHRAKTDKERLRISWPVFVAPR 281 (325)
T ss_pred cEEECCCCCCeEEEEechHHHHHhCC-ccccccceeeCCCCCCEEEEEEEecCC
Confidence 26899999998887431 11223 235688999754445799888887543
No 59
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=65.43 E-value=33 Score=32.24 Aligned_cols=87 Identities=25% Similarity=0.258 Sum_probs=55.0
Q ss_pred cceEEeeCCCC------cccccccccCCcCcccCCCceeEEEEEeecCCCCCcccccCCCCCCCCCCCCCCCCcchhhhc
Q 022502 121 DIQVLRYEHGQ------KYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAK 194 (296)
Q Consensus 121 ~~qv~rY~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~c~~ 194 (296)
-+++.+|.+-- -..+|.|.. .+|+| |.|...||--+|...+
T Consensus 177 ~~r~n~Yp~cp~pe~~lGl~~HtD~~------------~lTiL--lqd~~V~GLQv~~~dg------------------- 223 (322)
T KOG0143|consen 177 VMRLNYYPPCPEPELTLGLGAHTDKS------------FLTIL--LQDDDVGGLQVFTKDG------------------- 223 (322)
T ss_pred EEEEeecCCCcCccccccccCccCcC------------ceEEE--EccCCcCceEEEecCC-------------------
Confidence 57788888631 245677752 36666 5555668876775111
Q ss_pred CCeeEecccccEEEeee----cCCCCCCCCCccccCCcccccceEEEEEEe
Q 022502 195 KGIAVKPRRGDALLFFS----LHTNAIPDPVSLHSGCPVIEGEKWSATKWI 241 (296)
Q Consensus 195 ~~~~V~P~~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi 241 (296)
..+.|+|..|..||=-- ...|| .-...+|++..-...+|+++..++
T Consensus 224 ~Wi~V~P~p~a~vVNiGD~l~~lSNG-~ykSv~HRV~~n~~~~R~Sia~F~ 273 (322)
T KOG0143|consen 224 KWIDVPPIPGAFVVNIGDMLQILSNG-RYKSVLHRVVVNGEKERISVAFFV 273 (322)
T ss_pred eEEECCCCCCCEEEEcccHHhHhhCC-cccceEEEEEeCCCCceEEEEEEe
Confidence 27999999977666210 01233 234688999987777787777665
No 60
>PF02668 TauD: Taurine catabolism dioxygenase TauD, TfdA family; InterPro: IPR003819 This family consists of TauD/TfdA taurine catabolism dioxygenases. The Escherichia coli tauD gene is required for the utilization of taurine (2-aminoethanesulphonic acid) as a sulphur source and is expressed only under conditions of sulphate starvation. TauD is an alpha-ketoglutarate-dependent dioxygenase catalyzing the oxygenolytic release of sulphite from taurine []. The 2,4-dichlorophenoxyacetic acid/alpha-ketoglutarate dioxygenase from Burkholderia sp. (strain RASC) also belongs to this family []. TfdA from Ralstonia eutropha (Alcaligenes eutrophus) is a 2,4-D monooxygenase [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3SWT_B 3R1J_A 1GVG_A 1DRT_A 1DS1_A 1DS0_A 1DRY_A 3V15_A 3PVJ_D 3V17_A ....
Probab=65.31 E-value=6.7 Score=34.58 Aligned_cols=38 Identities=18% Similarity=0.302 Sum_probs=29.0
Q ss_pred CCeeEecccccEEEeeecCCCCCCCCCccccCCcc--cccceEEEEEE
Q 022502 195 KGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPV--IEGEKWSATKW 240 (296)
Q Consensus 195 ~~~~V~P~~G~alvF~n~~~~g~~D~~~lH~g~PV--~~G~K~i~~~W 240 (296)
..+.++-++|++|+|.| .+.+|+..+. ..|.|+..+.|
T Consensus 219 ~~~~~~~~~GDlli~dN--------~~~lHgR~~~~~~~~~R~L~R~~ 258 (258)
T PF02668_consen 219 YTYRHRWQPGDLLIWDN--------HRVLHGRTAFDDPDGDRHLLRVW 258 (258)
T ss_dssp GEEEEE--TTEEEEEET--------TTEEEEE--E-STTSSEEEEEEE
T ss_pred hcccccCCCceEEEEcC--------CeeEecCCCCCCCCCCEEEEEeC
Confidence 35678889999999987 5899999998 67899999888
No 61
>COG2850 Uncharacterized conserved protein [Function unknown]
Probab=64.67 E-value=15 Score=35.07 Aligned_cols=41 Identities=24% Similarity=0.521 Sum_probs=28.6
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCcceEEeeC-CCCcccccccccCC
Q 022502 98 DAIIAGIEDKIATWTFLPKENGEDIQVLRYE-HGQKYEPHYDYFSD 142 (296)
Q Consensus 98 d~v~~~i~~Ri~~~~~~p~~~~E~~qv~rY~-~G~~y~~H~D~~~~ 142 (296)
++-+.++++ .+.++|--...++.|. |. +||.|++|+|....
T Consensus 100 ~p~v~~l~~---~FrflP~wr~ddiMIS-~a~~GGgvg~H~D~YDV 141 (383)
T COG2850 100 HPEVAALME---PFRFLPDWRIDDIMIS-FAAPGGGVGPHFDQYDV 141 (383)
T ss_pred CHHHHHHHH---HhccCccccccceEEE-EecCCCccCccccchhe
Confidence 344555554 4556776666777777 66 79999999998653
No 62
>PTZ00273 oxidase reductase; Provisional
Probab=64.53 E-value=39 Score=31.53 Aligned_cols=47 Identities=15% Similarity=0.175 Sum_probs=31.3
Q ss_pred CeeEecccccEEEeee----cCCCCCCCCCccccCCcccccceEEEEEEeecc
Q 022502 196 GIAVKPRRGDALLFFS----LHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVD 244 (296)
Q Consensus 196 ~~~V~P~~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~ 244 (296)
-+.|+|..|.+||--- ...+| .-..++|++... ..+||++.-+++-.
T Consensus 226 Wi~V~p~pg~lvVNvGD~l~~~TnG-~~kSt~HRVv~~-~~~R~Si~~F~~p~ 276 (320)
T PTZ00273 226 WMDVPPLEGSFVVNIGDMMEMWSNG-RYRSTPHRVVNT-GVERYSMPFFCEPN 276 (320)
T ss_pred EEeCCCCCCeEEEEHHHHHHHHHCC-eeeCCCccccCC-CCCeEEEEEEEcCC
Confidence 6889999999887421 11223 234689999743 45798888887543
No 63
>PLN02254 gibberellin 3-beta-dioxygenase
Probab=64.25 E-value=52 Score=31.40 Aligned_cols=87 Identities=23% Similarity=0.289 Sum_probs=52.7
Q ss_pred cceEEeeCCCC------cccccccccCCcCcccCCCceeEEEEEeecCCCCCcccccCCCCCCCCCCCCCCCCcchhhhc
Q 022502 121 DIQVLRYEHGQ------KYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAK 194 (296)
Q Consensus 121 ~~qv~rY~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~c~~ 194 (296)
.+++.+|.+-. .-.+|.|. -.+|+|+- ++ .||=-++...+
T Consensus 211 ~lRl~~YPp~p~~~~~~G~~~HtD~------------g~lTiL~Q-d~--v~GLQV~~~~~------------------- 256 (358)
T PLN02254 211 ALQLNSYPVCPDPDRAMGLAPHTDS------------SLLTILYQ-SN--TSGLQVFREGV------------------- 256 (358)
T ss_pred eEEEecCCCCCCcccccCcCCccCC------------CcEEEEec-CC--CCCceEECCCC-------------------
Confidence 46788888621 24567765 35788764 32 35644443321
Q ss_pred CCeeEecccccEEEeee----cCCCCCCCCCccccCCcccccceEEEEEEee
Q 022502 195 KGIAVKPRRGDALLFFS----LHTNAIPDPVSLHSGCPVIEGEKWSATKWIH 242 (296)
Q Consensus 195 ~~~~V~P~~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~ 242 (296)
..+.|+|..|.+||--- .+.|| .-...+|++-.-...+|+++.-+++
T Consensus 257 ~Wi~V~p~pgalVVNiGD~lq~~SNg-~~kS~~HRVv~~~~~~R~Sia~F~~ 307 (358)
T PLN02254 257 GWVTVPPVPGSLVVNVGDLLHILSNG-RFPSVLHRAVVNKTRHRISVAYFYG 307 (358)
T ss_pred EEEEcccCCCCEEEEhHHHHHHHhCC-eeccccceeecCCCCCEEEEEEEec
Confidence 26899999999988421 11223 2357899995433457888887774
No 64
>PF10014 2OG-Fe_Oxy_2: 2OG-Fe dioxygenase; InterPro: IPR018724 Members of this family of hypothetical bacterial proteins have no known function. Some are described as putative biofilm formation or putative agglutination proteins. ; PDB: 3PL0_B.
Probab=63.14 E-value=4.9 Score=35.00 Aligned_cols=56 Identities=20% Similarity=0.186 Sum_probs=31.8
Q ss_pred ceeEEEEEeecCCCCCcccccCCCCCCCCCCCCCCCCcchhhhcCCeeEecccccEEEeeecCCCCCCCCCccccCCccc
Q 022502 151 HRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVI 230 (296)
Q Consensus 151 ~R~~T~liYLND~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~D~~~lH~g~PV~ 230 (296)
...++.+|--+.+ +||+|.....+... .....--..|+.+++. |...+|.+.||.
T Consensus 124 d~v~~~li~r~Ni-~GG~s~i~~~~~~~----------------~~~~~l~~p~d~l~~~--------D~~~~H~vtpI~ 178 (195)
T PF10014_consen 124 DFVFIHLINRHNI-EGGESQIYDNDKEI----------------LFFFTLLEPGDTLLVD--------DRRVWHYVTPIR 178 (195)
T ss_dssp SEEEEEEEEEESE-EE--EEEEETTSSE----------------EEEE---STTEEEEEE--------TTTEEEEE--EE
T ss_pred CEEEEEEEcCCCc-cCceEEEEeCCCCc----------------ceEEEecCCCCEEEEe--------CCcceECCCcee
Confidence 4556666666565 88988764432110 1234455669999985 689999999998
Q ss_pred c
Q 022502 231 E 231 (296)
Q Consensus 231 ~ 231 (296)
.
T Consensus 179 ~ 179 (195)
T PF10014_consen 179 P 179 (195)
T ss_dssp E
T ss_pred c
Confidence 4
No 65
>cd00250 CAS_like Clavaminic acid synthetase (CAS) -like; CAS is a trifunctional Fe(II)/ 2-oxoglutarate (2OG) oxygenase carrying out three reactions in the biosynthesis of clavulanic acid, an inhibitor of class A serine beta-lactamases. In general, Fe(II)-2OG oxygenases catalyze a hydroxylation reaction, which leads to the incorporation of an oxygen atom from dioxygen into a hydroxyl group and conversion of 2OG to succinate and CO2
Probab=58.23 E-value=15 Score=33.07 Aligned_cols=40 Identities=25% Similarity=0.483 Sum_probs=33.3
Q ss_pred CCeeEecccccEEEeeecCCCCCCCCCccccCCcccc---cceEEEEEEee
Q 022502 195 KGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIE---GEKWSATKWIH 242 (296)
Q Consensus 195 ~~~~V~P~~G~alvF~n~~~~g~~D~~~lH~g~PV~~---G~K~i~~~Wi~ 242 (296)
..+.++-++|++|+|.| .+.+|+-.+-.. +.||....|+.
T Consensus 218 ~~~~~~l~~Gdivi~DN--------~r~lHgR~~f~~~~~~~R~L~r~~i~ 260 (262)
T cd00250 218 NQLTVKLEPGDLLIFDN--------RRVLHGRTAFSPRYGGDRWLKGCYVD 260 (262)
T ss_pred hEEEEEcCCCCEEEEec--------hhhhcCCCCCCCCCCCceEEEEEEec
Confidence 45788999999999987 589999988764 57999999984
No 66
>PLN02393 leucoanthocyanidin dioxygenase like protein
Probab=56.60 E-value=92 Score=29.68 Aligned_cols=48 Identities=19% Similarity=0.061 Sum_probs=31.2
Q ss_pred CeeEecccccEEEeee----cCCCCCCCCCccccCCcccccceEEEEEEeecc
Q 022502 196 GIAVKPRRGDALLFFS----LHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVD 244 (296)
Q Consensus 196 ~~~V~P~~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~ 244 (296)
.+.|+|..|.+||--- .+.+| .-..++|++-.-...+||++.-+++-.
T Consensus 261 W~~V~p~pgalVVNiGD~l~~~Tng-~~kSt~HRVv~~~~~~R~SiafF~~P~ 312 (362)
T PLN02393 261 WITVKPVPDAFIVNIGDQIQVLSNA-IYKSVEHRVIVNSAKERVSLAFFYNPK 312 (362)
T ss_pred EEECCCCCCeEEEEcchhhHhhcCC-eeeccceecccCCCCCEEEEEEEecCC
Confidence 6889999998887421 11122 225688999543445799988887543
No 67
>PLN02704 flavonol synthase
Probab=55.48 E-value=36 Score=32.09 Aligned_cols=48 Identities=15% Similarity=0.071 Sum_probs=32.3
Q ss_pred CeeEecccccEEEeee----cCCCCCCCCCccccCCcccccceEEEEEEeecc
Q 022502 196 GIAVKPRRGDALLFFS----LHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVD 244 (296)
Q Consensus 196 ~~~V~P~~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~ 244 (296)
-+.|+|..|.+||--- .+.|| .-..++|++...-..+||++.-+++-.
T Consensus 246 Wi~V~p~pg~lvVNvGD~L~~~TNg-~~kSt~HRVv~~~~~~R~Si~~F~~p~ 297 (335)
T PLN02704 246 WFDVKYIPNALVIHIGDQIEILSNG-KYKSVLHRTTVNKEKTRMSWPVFLEPP 297 (335)
T ss_pred EEeCCCCCCeEEEEechHHHHHhCC-eeecccceeecCCCCCeEEEEEEecCC
Confidence 6899999998887431 11222 235689999654456799998888643
No 68
>PLN03178 leucoanthocyanidin dioxygenase; Provisional
Probab=54.52 E-value=38 Score=32.28 Aligned_cols=48 Identities=15% Similarity=0.068 Sum_probs=31.8
Q ss_pred CeeEecccccEEEeee----cCCCCCCCCCccccCCcccccceEEEEEEeecc
Q 022502 196 GIAVKPRRGDALLFFS----LHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVD 244 (296)
Q Consensus 196 ~~~V~P~~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~ 244 (296)
.+.|+|..|.+||--- .+.|| .-..++|++-.-...+||++.-+++-.
T Consensus 258 Wi~V~p~pg~lvVNiGD~L~~~TNG-~~kSt~HRVv~~~~~~R~Si~~F~~P~ 309 (360)
T PLN03178 258 WVTAKCVPDSIVVHIGDTLEILSNG-RYKSILHRGLVNKEKVRISWAVFCEPP 309 (360)
T ss_pred EEEcCCCCCeEEEEccHHHHHHhCC-ccccccceeecCCCCCeEEEEEEecCC
Confidence 6899999998887321 01222 235789997533345799999888644
No 69
>PLN02156 gibberellin 2-beta-dioxygenase
Probab=52.34 E-value=1.5e+02 Score=27.94 Aligned_cols=48 Identities=13% Similarity=0.064 Sum_probs=33.3
Q ss_pred CeeEecccccEEEeee----cCCCCCCCCCccccCCcccccceEEEEEEeecc
Q 022502 196 GIAVKPRRGDALLFFS----LHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVD 244 (296)
Q Consensus 196 ~~~V~P~~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~ 244 (296)
.+.|.|..|.+||--- .+.||. -..+.|++......+||++.-+++-.
T Consensus 228 Wi~Vpp~pga~VVNiGD~l~~wTNg~-~kSt~HRVv~~~~~~R~SiafF~~P~ 279 (335)
T PLN02156 228 WVDVPPDHSSFFVLVGDTLQVMTNGR-FKSVKHRVVTNTKRSRISMIYFAGPP 279 (335)
T ss_pred EEEccCCCCcEEEEhHHHHHHHhCCe-eeccceeeecCCCCCEEEEEEeecCC
Confidence 6899999999888421 112232 35789999866666899988887533
No 70
>PF11403 Yeast_MT: Yeast metallothionein; InterPro: IPR022710 Metallothioneins are characterised by an abundance of cysteine residues and a lack of generic secondary structure motifs. This protein functions in primary metal storage, transport and detoxification []. For the first 40 residues in the protein the polypeptide wraps around the metal by forming two large parallel loops separated by a deep cleft containing the metal cluster []. ; PDB: 1AQS_A 1AQR_A 1RJU_V 1FMY_A 1AOO_A 1AQQ_A.
Probab=48.17 E-value=7.7 Score=23.88 Aligned_cols=15 Identities=40% Similarity=1.057 Sum_probs=8.6
Q ss_pred cCccccCcccccccccCcchhhhhcC
Q 022502 269 LGECTKNPEYMVGSAQLPGFCRRSCK 294 (296)
Q Consensus 269 ~geC~~n~~~m~~~~~~~~~C~~sC~ 294 (296)
-|.|.+| ..|+|||.
T Consensus 11 cgscknn-----------eqcqkscs 25 (40)
T PF11403_consen 11 CGSCKNN-----------EQCQKSCS 25 (40)
T ss_dssp SSTTTT------------TTSTTS-S
T ss_pred cCCccCh-----------HHHhhcCC
Confidence 4567666 66777774
No 71
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only]
Probab=46.21 E-value=83 Score=29.59 Aligned_cols=89 Identities=24% Similarity=0.299 Sum_probs=58.0
Q ss_pred CCcceEEeeCC------CCcccccccccCCcCcccCCCceeEEEEEeecCCCCCcccccCCCCCCCCCCCCCCCCcchhh
Q 022502 119 GEDIQVLRYEH------GQKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSEC 192 (296)
Q Consensus 119 ~E~~qv~rY~~------G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~c 192 (296)
.+.++++||.. ++.-+.|.|+. .+|+| +.| ..||=-+.+...
T Consensus 173 ~~~~RLlrYP~~~~~~~~~~~GaHtD~G------------~lTLl--~Qd-~~~GLqv~~~~g----------------- 220 (322)
T COG3491 173 NSVLRLLRYPSRPAREGADGVGAHTDYG------------LLTLL--FQD-DVGGLEVRPPNG----------------- 220 (322)
T ss_pred hheEEEEecCCCcccccccccccccCCC------------eEEEE--Eec-ccCCeEEecCCC-----------------
Confidence 45699999993 23446777763 34544 334 467766665532
Q ss_pred hcCCeeEecccccEEEeee----cCCCCCCCCCccccCCcccccceEEEEEEee
Q 022502 193 AKKGIAVKPRRGDALLFFS----LHTNAIPDPVSLHSGCPVIEGEKWSATKWIH 242 (296)
Q Consensus 193 ~~~~~~V~P~~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~ 242 (296)
..+.|.|..|..||..- ...+| .=..+.|+++--..=+||++--++.
T Consensus 221 --~Wl~v~P~pgtlvVNiGdmLe~~Tng-~lrST~HRV~~~~~~~R~SipfF~~ 271 (322)
T COG3491 221 --GWLDVPPIPGTLVVNIGDMLERWTNG-RLRSTVHRVRNPPGVDRYSIPFFLE 271 (322)
T ss_pred --CeeECCCCCCeEEEeHHHHHHHHhCC-eeccccceeecCCCccceeeeeecc
Confidence 26999999999999752 12223 2357899998766448888766654
No 72
>PRK09553 tauD taurine dioxygenase; Reviewed
Probab=37.69 E-value=24 Score=32.14 Aligned_cols=34 Identities=21% Similarity=0.205 Sum_probs=25.0
Q ss_pred cccccccCCcCcccCCCceeEEEEEeecCCCCCcccccCC
Q 022502 134 EPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPN 173 (296)
Q Consensus 134 ~~H~D~~~~~~~~~~~~~R~~T~liYLND~~~GGeT~Fp~ 173 (296)
.||.|..... ..-.+++|.-+.-+.+||+|.|-+
T Consensus 95 ~wHtD~sy~~------~pp~~~~L~~~~~p~~GG~T~fad 128 (277)
T PRK09553 95 NWHTDVTFIE------TPPLGAILAAKQLPSTGGDTLWAS 128 (277)
T ss_pred CCeecccCee------CCCceeEEEEEecCCCCCccHhhh
Confidence 4999997653 123477777777778999999954
No 73
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=36.36 E-value=1.2e+02 Score=28.43 Aligned_cols=91 Identities=21% Similarity=0.280 Sum_probs=52.3
Q ss_pred cceEEeeCCCC-------cccccccccCCcCcccCCCceeEEEEEeecCCCCCcccccCCCCCCCCCCCCCCCCcchhhh
Q 022502 121 DIQVLRYEHGQ-------KYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECA 193 (296)
Q Consensus 121 ~~qv~rY~~G~-------~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~c~ 193 (296)
.+++++|.+-. ...+|.|. -.+|+|+ .| ..||=-++.......
T Consensus 183 ~lrl~~YP~~~~~~~~~~g~~~HTD~------------g~lTlL~--qd-~v~GLQV~~~~~~~~--------------- 232 (332)
T PLN03002 183 TMRLLRYQGISDPSKGIYACGAHSDF------------GMMTLLA--TD-GVMGLQICKDKNAMP--------------- 232 (332)
T ss_pred heeeeeCCCCCCcccCccccccccCC------------CeEEEEe--eC-CCCceEEecCCCCCC---------------
Confidence 47889997631 13467765 2678884 34 246644443210000
Q ss_pred cCCeeEecccccEEEeee----cCCCCCCCCCccccCCcccccceEEEEEEeec
Q 022502 194 KKGIAVKPRRGDALLFFS----LHTNAIPDPVSLHSGCPVIEGEKWSATKWIHV 243 (296)
Q Consensus 194 ~~~~~V~P~~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~ 243 (296)
...+.|.|..|..||--- .+.+| .-..++|++.. -..+||++.-+++-
T Consensus 233 g~Wi~Vpp~pg~~VVNiGD~L~~wTng-~~kSt~HRVv~-~~~~R~Sia~F~~p 284 (332)
T PLN03002 233 QKWEYVPPIKGAFIVNLGDMLERWSNG-FFKSTLHRVLG-NGQERYSIPFFVEP 284 (332)
T ss_pred CcEEECCCCCCeEEEEHHHHHHHHhCC-eeECcCCeecC-CCCCeeEEEEEecC
Confidence 126889999998887421 11222 12468899953 34578888877753
No 74
>KOG1971 consensus Lysyl hydroxylase [Posttranslational modification, protein turnover, chaperones]
Probab=31.78 E-value=40 Score=32.77 Aligned_cols=78 Identities=22% Similarity=0.288 Sum_probs=47.2
Q ss_pred CceeEEEEEeecCCCCCcccccCCCCCCCCCCCCCCCCcchhhhcCCeeEecccccEEEeeecCCCCCCCCCccccCCcc
Q 022502 150 GHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPV 229 (296)
Q Consensus 150 ~~R~~T~liYLND~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~D~~~lH~g~PV 229 (296)
..|..|+.+||.+..+||+..|-.......... .+.| .-+...=.-|.+++..+ .+.|...+.
T Consensus 280 ~~~e~~l~v~l~nq~~gG~L~~~~~~~~~h~~~---~~~~-----EiFdn~h~p~qa~LHrg---------~~~~~a~~~ 342 (415)
T KOG1971|consen 280 DAREVGLFVCLSNQFEGGELLFTGKYCTKHLRT---DDLW-----EIFDNSHDPGQAYLHRG---------YHKHGARAT 342 (415)
T ss_pred chhhcceeEEecccccCCeeEeeccccccccCC---Cchh-----hhccCcCCCccceecCc---------chhcccccc
Confidence 468999999999999999999976532221100 0000 01222223366666654 456666666
Q ss_pred cccceEEEEEEeecc
Q 022502 230 IEGEKWSATKWIHVD 244 (296)
Q Consensus 230 ~~G~K~i~~~Wi~~~ 244 (296)
+.|..+.-..|+...
T Consensus 343 ~~~~~~~nv~~~~~~ 357 (415)
T KOG1971|consen 343 IVGQPCPNVYWFPIS 357 (415)
T ss_pred CCCCCCCceeeehhH
Confidence 667767777787443
No 75
>PF08562 Crisp: Crisp; InterPro: IPR013871 This entry is found on Crisp proteins which contain IPR001283 from INTERPRO and has been termed the Crisp domain. It is found in the mammalian reproductive tract and the venom of reptiles, and has been shown to regulate ryanodine receptor Ca2+ signalling []. It contains 10 conserved cysteines which are all involved in disulphide bonds and is structurally related to the ion channel inhibitor toxins BgK and ShK []. ; PDB: 3MZ8_B 1XX5_B 2GIZ_A 1XTA_A 1RC9_A 2A05_A 2CQ7_A 2DDA_C 2EPF_A 2DDB_C ....
Probab=27.14 E-value=24 Score=24.39 Aligned_cols=29 Identities=21% Similarity=0.582 Sum_probs=24.0
Q ss_pred cCccccHHHhhcCccccCcccccccccCcchhhhhcC
Q 022502 258 DNNASCERWAALGECTKNPEYMVGSAQLPGFCRRSCK 294 (296)
Q Consensus 258 d~~~~C~~Wa~~geC~~n~~~m~~~~~~~~~C~~sC~ 294 (296)
|...+|..-.+.--|+. .+|. .+|+.||.
T Consensus 21 D~~sNC~~l~~~~~C~~--~~~k------~~C~AtC~ 49 (55)
T PF08562_consen 21 DKYSNCKSLKKQWGCQH--PYVK------SNCKATCF 49 (55)
T ss_dssp -SSTTHHHHHHHSTTTS--HHHH------HHSHHHHH
T ss_pred ccccccHHHHHhcCCCC--hHHh------cCCCCeeC
Confidence 56788999999988988 5688 89999984
No 76
>COG4902 Uncharacterized protein conserved in archaea [Function unknown]
Probab=25.42 E-value=1.3e+02 Score=25.10 Aligned_cols=54 Identities=24% Similarity=0.258 Sum_probs=36.7
Q ss_pred hhhHHHHHHHHhhhhhh--ccCCCCcccCCceeEEeecCCcEEEEcCCCCHHHHHHHHHHHhc
Q 022502 5 RLSLNFFFLLSFSLLIR--KSFSSTAIINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKS 65 (296)
Q Consensus 5 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~kve~ls~~P~i~ii~nfLs~~Ec~~li~~a~~ 65 (296)
-.|+.||.++.|++.+- .++.++. .|+.++.. +.+.+..||++|...||..-+.
T Consensus 5 i~~~~~~~l~l~t~v~~~~~~~~gt~--~~s~~~~~-----~~l~~~plsdeE~nsLiyMrEE 60 (189)
T COG4902 5 ISSLTFFVLLLITAVVGISGCQEGTN--SESTDTSG-----VTLQDSPLSDEEINSLIYMREE 60 (189)
T ss_pred hhhhHHHHHHHHHHHHhhhhhccCCC--CCCccchh-----hcccCCCCChHHHhhHHHHHHH
Confidence 35788888888877654 3444443 35444433 3456778999999999988764
No 77
>TIGR02410 carnitine_TMLD trimethyllysine dioxygenase. Members of this family with known function act as trimethyllysine dioxygenase, an enzyme in the pathway for carnitine biosynthesis from lysine. This enzyme is homologous to gamma-butyrobetaine,2-oxoglutarate dioxygenase, which catalyzes the last step in carnitine biosynthesis. Members of this family appear to be eukaryotic only.
Probab=24.89 E-value=87 Score=29.79 Aligned_cols=39 Identities=26% Similarity=0.302 Sum_probs=31.7
Q ss_pred CCeeEecccccEEEeeecCCCCCCCCCccccCCcccccceEEEEEEee
Q 022502 195 KGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIH 242 (296)
Q Consensus 195 ~~~~V~P~~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~ 242 (296)
..+.++=+.|++|+|.| .+.+|+...-. |.||..-.++-
T Consensus 311 ~~~~~~l~pGd~vi~DN--------~rvLHgRtaf~-g~R~L~G~Y~d 349 (362)
T TIGR02410 311 NEIEFKLRPGTVLIFDN--------WRVLHSRTSFT-GYRRMCGCYLT 349 (362)
T ss_pred cEEEEEcCCccEEEEee--------EEEeecCCCcC-CceEEEEEEEc
Confidence 45788899999999987 58999999875 88877766663
No 78
>PF07894 DUF1669: Protein of unknown function (DUF1669); InterPro: IPR012461 This family is composed of sequences derived from hypothetical eukaryotic proteins of unknown function. Some members of this family are annotated as being potential phospholipases but no literature was found to support this.
Probab=24.55 E-value=86 Score=29.07 Aligned_cols=19 Identities=21% Similarity=0.296 Sum_probs=17.2
Q ss_pred EcCCCCHHHHHHHHHHHhc
Q 022502 47 YEGFLTDLECDHLINLAKS 65 (296)
Q Consensus 47 i~nfLs~~Ec~~li~~a~~ 65 (296)
+.+|||++|.+.|.+.++.
T Consensus 47 ~~~FLS~~Ei~~I~~~~~~ 65 (284)
T PF07894_consen 47 ERDFLSSEEIQYILENAED 65 (284)
T ss_pred CCCCCCHHHHHHHHHhccC
Confidence 4699999999999999986
No 79
>PF07350 DUF1479: Protein of unknown function (DUF1479); InterPro: IPR010856 This family consists of several hypothetical Enterobacterial proteins, of around 420 residues in length. Members of this family are often known as YbiU. The function of this family is unknown.; PDB: 2CSG_A 2DBI_A 2DBN_A.
Probab=24.55 E-value=46 Score=32.55 Aligned_cols=41 Identities=17% Similarity=0.229 Sum_probs=20.2
Q ss_pred CeeEe-cccccEEEeeecCCCCCCCCCccccCCcccccceEEEEEEeeccc
Q 022502 196 GIAVK-PRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVDS 245 (296)
Q Consensus 196 ~~~V~-P~~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~~ 245 (296)
-+.|. -++||.|+|+. ++.|++.++..|..+..+.+|-.-|
T Consensus 318 mv~iP~v~PGD~V~WHc---------D~iH~Vd~~h~g~~~ssV~Yipa~P 359 (416)
T PF07350_consen 318 MVSIPDVEPGDYVFWHC---------DLIHAVDPEHNGKGDSSVMYIPACP 359 (416)
T ss_dssp -EE---B-TT-EEEEET---------T--EEE--BSS-SS---EEE--B-E
T ss_pred cccCCCCCCCCeEEEeC---------CccccccccCCCCCCCCeeEecCCC
Confidence 45665 35699999974 7999999999999999988874433
No 80
>PF08686 PLAC: PLAC (protease and lacunin) domain; InterPro: IPR010909 The PLAC (protease and lacunin) domain is a six-cysteine region of about 40 residues that is present at or near the C-terminal of various enzymes and matrix proteins, including: mammalian PACE4 (paired basic amino acid cleaving enzyme 4), mammalian PCSK5 (proprotein convertase subtilisin/kexin type 5), mammalian metalloproteinases ADAMTS-2, -3, -10, -12, -14, -16, -17, and -19, and manduca Sexta matrix protein lacunin []. The PLAC domain is often associated with other domains, such as the thrombospondin type I repeat (TSP1) (IPR000884 from INTERPRO), the Kunitz proteinase inhibitor domain (IPR002223 from INTERPRO), the Ig-like domain (IPR007110 from INTERPRO), the WAP domain (IPR008197 from INTERPRO), the subtilase domain (IPR000209 from INTERPRO), or the ADAM-type metalloprotease domain (IPR001590 from INTERPRO).; GO: 0008233 peptidase activity
Probab=24.04 E-value=44 Score=20.59 Aligned_cols=32 Identities=31% Similarity=0.710 Sum_probs=25.7
Q ss_pred ccccCcc-ccHHHhhcCccccCcccccccccCcchhhhhcC
Q 022502 255 DCTDNNA-SCERWAALGECTKNPEYMVGSAQLPGFCRRSCK 294 (296)
Q Consensus 255 ~C~d~~~-~C~~Wa~~geC~~n~~~m~~~~~~~~~C~~sC~ 294 (296)
+|.|... .|..=.+.+-|.. +-| . ..|-+||.
T Consensus 1 ~C~D~~~~~C~lV~q~~lC~~-~~Y-~------~~CC~SC~ 33 (34)
T PF08686_consen 1 ECKDKPRFNCSLVVQARLCSY-KYY-R------QFCCRSCS 33 (34)
T ss_pred CCCCCCCccchhhhhcCCCCc-HHH-H------HHHHHhhC
Confidence 4899988 9999999999965 343 4 68999985
No 81
>PF00642 zf-CCCH: Zinc finger C-x8-C-x5-C-x3-H type (and similar); InterPro: IPR000571 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents C-x8-C-x5-C-x3-H (CCCH) type Zinc finger (Znf) domains. Proteins containing CCCH Znf domains include Znf proteins from eukaryotes involved in cell cycle or growth phase-related regulation, e.g. human TIS11B (butyrate response factor 1), a probable regulatory protein involved in regulating the response to growth factors, and the mouse TTP growth factor-inducible nuclear protein, which has the same function. The mouse TTP protein is induced by growth factors. Another protein containing this domain is the human splicing factor U2AF 35kDa subunit, which plays a critical role in both constitutive and enhancer-dependent splicing by mediating essential protein-protein interactions and protein-RNA interactions required for 3' splice site selection. It has been shown that different CCCH-type Znf proteins interact with the 3'-untranslated region of various mRNA [, ]. This type of Znf is very often present in two copies. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003676 nucleic acid binding, 0008270 zinc ion binding; PDB: 1M9O_A 1RGO_A 2CQE_A 2FC6_A 2D9M_A 2E5S_A 2RHK_C 2D9N_A 3D2S_A 3D2Q_C ....
Probab=23.98 E-value=52 Score=18.83 Aligned_cols=16 Identities=19% Similarity=0.478 Sum_probs=10.6
Q ss_pred ccccHHHhhcCccccC
Q 022502 260 NASCERWAALGECTKN 275 (296)
Q Consensus 260 ~~~C~~Wa~~geC~~n 275 (296)
...|..|++.|.|...
T Consensus 3 ~~~C~~f~~~g~C~~G 18 (27)
T PF00642_consen 3 TKLCRFFMRTGTCPFG 18 (27)
T ss_dssp SSB-HHHHHTS--TTG
T ss_pred cccChhhccCCccCCC
Confidence 3579999999999875
No 82
>PF05906 DUF865: Herpesvirus-7 repeat of unknown function (DUF865)
Probab=22.57 E-value=62 Score=19.40 Aligned_cols=15 Identities=33% Similarity=0.671 Sum_probs=12.6
Q ss_pred CeeEeccc--ccEEEee
Q 022502 196 GIAVKPRR--GDALLFF 210 (296)
Q Consensus 196 ~~~V~P~~--G~alvF~ 210 (296)
.++++|.+ |.||+|.
T Consensus 16 pltfkpvkttgtavvfs 32 (35)
T PF05906_consen 16 PLTFKPVKTTGTAVVFS 32 (35)
T ss_pred ccceeeeeccceEEEee
Confidence 68889887 9999994
No 83
>PLN03207 stomagen; Provisional
Probab=22.49 E-value=66 Score=24.92 Aligned_cols=17 Identities=47% Similarity=0.717 Sum_probs=11.0
Q ss_pred CchhhhHHHHHHHHhhh
Q 022502 2 SPTRLSLNFFFLLSFSL 18 (296)
Q Consensus 2 ~~~~~~~~~~~~~~~~~ 18 (296)
.-|.+++++||||.+-+
T Consensus 7 ~~tt~~~~lffLl~~ll 23 (113)
T PLN03207 7 TATTRCLTLFFLLFFLL 23 (113)
T ss_pred cccchhHHHHHHHHHHH
Confidence 34566777777776644
No 84
>cd00250 CAS_like Clavaminic acid synthetase (CAS) -like; CAS is a trifunctional Fe(II)/ 2-oxoglutarate (2OG) oxygenase carrying out three reactions in the biosynthesis of clavulanic acid, an inhibitor of class A serine beta-lactamases. In general, Fe(II)-2OG oxygenases catalyze a hydroxylation reaction, which leads to the incorporation of an oxygen atom from dioxygen into a hydroxyl group and conversion of 2OG to succinate and CO2
Probab=22.19 E-value=99 Score=27.59 Aligned_cols=37 Identities=22% Similarity=0.228 Sum_probs=27.2
Q ss_pred CcccccccccCCcCcccCCCceeEEEEEeecCCCCCcccccCC
Q 022502 131 QKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPN 173 (296)
Q Consensus 131 ~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~~GGeT~Fp~ 173 (296)
....+|+|..... ..-.+++|.-|....+||+|.|-+
T Consensus 94 ~~l~~HtD~~y~~------~pp~~~~L~cl~~~~~GG~T~~vd 130 (262)
T cd00250 94 TLLPLHTDLAYHE------YRPGLQILHCLRNTATGGATLLVD 130 (262)
T ss_pred CCcCccccCCCCC------CCCceEEEEEeccCCCCCcceeee
Confidence 5566899987642 223467777788888999999976
No 85
>PRK09965 3-phenylpropionate dioxygenase ferredoxin subunit; Provisional
Probab=21.90 E-value=1.3e+02 Score=22.99 Aligned_cols=49 Identities=16% Similarity=0.148 Sum_probs=31.9
Q ss_pred EEEEeecCCCCCcccccCCCCCCCCCCCCCCCCcchhhhcCCeeEecccccEEEeeecCCCCCCCCCccccCCccccc
Q 022502 155 TVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEG 232 (296)
Q Consensus 155 T~liYLND~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~D~~~lH~g~PV~~G 232 (296)
+.+.-++|..+|+...|.... .+.|.-..|....|.| ...|.++|+..|
T Consensus 4 ~~v~~~~~l~~g~~~~~~~~~--------------------~i~v~~~~g~~~A~~~---------~CpH~g~~L~~G 52 (106)
T PRK09965 4 IYACPVADLPEGEALRVDTSP--------------------VIALFNVGGEFYAIDD---------RCSHGNASLSEG 52 (106)
T ss_pred EEeeeHHHcCCCCeEEEeCCC--------------------eEEEEEECCEEEEEeC---------cCCCCCCCCCce
Confidence 345567777777766664310 3455555777777754 688999998654
No 86
>TIGR02409 carnitine_bodg gamma-butyrobetaine hydroxylase. Members of this protein family are gamma-butyrobetaine hydroxylase, both bacterial and eukarytotic. This enzyme catalyzes the last step in the conversion of lysine to carnitine. Carnitine can serve as a compatible solvent in bacteria and also participates in fatty acid metabolism.
Probab=21.26 E-value=1.2e+02 Score=28.93 Aligned_cols=39 Identities=23% Similarity=0.280 Sum_probs=30.9
Q ss_pred CeeEecccccEEEeeecCCCCCCCCCccccCCccc--ccceEEEEEEee
Q 022502 196 GIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVI--EGEKWSATKWIH 242 (296)
Q Consensus 196 ~~~V~P~~G~alvF~n~~~~g~~D~~~lH~g~PV~--~G~K~i~~~Wi~ 242 (296)
.+.++=++|++|+|.| .+.+|+..+-. .|.|+..-.++.
T Consensus 313 ~~~~~l~pGd~vi~DN--------~rvlH~R~af~~~~~~R~L~g~Y~d 353 (366)
T TIGR02409 313 KFTFKLEPGDLVLFDN--------TRLLHARDAFSNPEGKRHLQGCYAD 353 (366)
T ss_pred EEEEEcCCCcEEEEec--------eEEeecCCCcCCCCCceEEEEEEEc
Confidence 4677888999999987 58999998875 577777666663
No 87
>PF01448 ELM2: ELM2 domain; InterPro: IPR000949 The ELM2 (Egl-27 and MTA1 homology 2) domain is a small domain of unknown function. It is found in the MTA1 protein that is part of the NuRD complex []. The domain is usually found to the N terminus of a myb-like DNA binding domain and a GATA binding domain. ELM2, in some instances, is also found associated with the ARID DNA binding domain IPR001606 from INTERPRO. This suggests that ELM2 may also be involved in DNA binding, or perhaps is a protein-protein interaction domain.
Probab=21.17 E-value=1.5e+02 Score=19.77 Aligned_cols=44 Identities=18% Similarity=0.338 Sum_probs=28.7
Q ss_pred hhhhhccCCCCcccCCce--eEEeecCCcEEEEcCCCCHHHHHHHHHHHhc
Q 022502 17 SLLIRKSFSSTAIINPSK--VKQISWKPRAFVYEGFLTDLECDHLINLAKS 65 (296)
Q Consensus 17 ~~~~~~~~~~~~~~~p~k--ve~ls~~P~i~ii~nfLs~~Ec~~li~~a~~ 65 (296)
-+.|+........-.... -++|-|.| .+.+++.+.+.++..|+.
T Consensus 8 QA~IP~~~~~~~~~~~~~~~~e~lvW~P-----~~~~~d~~l~~yl~~A~s 53 (55)
T PF01448_consen 8 QAEIPELLPDSERDEDQEEDEEELVWSP-----NNPLSDRKLEEYLKVAKS 53 (55)
T ss_pred CCcCCCCccccccccccccccceEeECC-----CCCCCHHHHHHHHHHHHh
Confidence 344444444443323322 56677888 478999999999998864
Done!