BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022503
(296 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q96329|ACOX4_ARATH Acyl-coenzyme A oxidase 4, peroxisomal OS=Arabidopsis thaliana
GN=ACX4 PE=1 SV=1
Length = 436
Score = 470 bits (1210), Expect = e-132, Method: Compositional matrix adjust.
Identities = 221/296 (74%), Positives = 254/296 (85%), Gaps = 3/296 (1%)
Query: 1 MLTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQK 60
MLTIA GSEAQK KYLPSLAQL T+A WALTEP++GSDAS L T ATKVEGGW + GQK
Sbjct: 144 MLTIALCGSEAQKEKYLPSLAQLNTVACWALTEPDNGSDASGLGTTATKVEGGWKINGQK 203
Query: 61 RWIGNSTFADVLVVMARNTTTKKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKV 120
RWIGNSTFAD+L++ ARNTTT +IN FIVKKDAPGL ATKI NKIGLRM+QNGDIL + V
Sbjct: 204 RWIGNSTFADLLIIFARNTTTNQINGFIVKKDAPGLKATKIPNKIGLRMVQNGDILLQNV 263
Query: 121 FVPDEDRLPGFNSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPLAAF 180
FVPDEDRLPG NSFQDT+ L+V+RVMVAWQ IGIS+G+YDMC+RYL ERKQFGAPLAAF
Sbjct: 264 FVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGIYDMCHRYLKERKQFGAPLAAF 323
Query: 181 QITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGRELL 240
Q+ QQKL QMLGN+QAM L+GWRLC++ E G+M+ GQASLGKAW+S++ARET +LGRELL
Sbjct: 324 QLNQQKLVQMLGNVQAMFLMGWRLCKLYETGQMTPGQASLGKAWISSKARETASLGRELL 383
Query: 241 GGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITGFASFKPTSSAQQSRL 296
GGNGI+ DFLV KAFCD EP +T EG+YDIN L+ RE+TG ASFKP A +SRL
Sbjct: 384 GGNGILADFLVAKAFCDLEPIYTYEGTYDINTLVTGREVTGIASFKP---ATRSRL 436
>sp|Q20772|GCDH_CAEEL Probable glutaryl-CoA dehydrogenase, mitochondrial
OS=Caenorhabditis elegans GN=F54D5.7 PE=1 SV=1
Length = 409
Score = 184 bits (468), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 159/286 (55%), Gaps = 5/286 (1%)
Query: 4 IATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAAT--KVEGGWILEGQKR 61
I GSE QK+KY+P LA + + LTEPNHGS+ + T AT + + L G K
Sbjct: 124 IYNYGSEDQKQKYIPDLASGKKIGCFGLTEPNHGSNPGGMETKATWDETTKTYKLNGSKT 183
Query: 62 WIGNSTFADVLVVMARNT-TTKKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKV 120
WI NS +DV+VV AR+ KI FI+++ GLT KIE K+ LR G I V
Sbjct: 184 WISNSPVSDVMVVWARSARHNNKIKGFILERGMKGLTTPKIEGKLSLRASITGQIAMDDV 243
Query: 121 FVPDEDRLPGFNSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPLAAF 180
VP+E+ LP Q L+ AR+ +AW +G + + + +Y ++R+QFG PLA
Sbjct: 244 PVPEENLLPNAEGLQGPFGCLNNARLGIAWGALGAAEECFHLARQYTLDRQQFGRPLAQN 303
Query: 181 QITQQKLAQMLGNIQAMNLVG-WRLCRMCENGKMSLGQASLGKAWVSARARETVALGREL 239
Q+ Q K+A ML I ++ L G R+ R+ + GK+ Q S+ K +A E R++
Sbjct: 304 QLMQLKMADMLTEI-SLGLQGCLRVSRLKDEGKVQSEQISIIKRNSCGKALEVARKARDM 362
Query: 240 LGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITGFASF 285
LGGNGIV ++ + + + E +T EG++D++ LI R ITG F
Sbjct: 363 LGGNGIVDEYHIMRHMVNLETVNTYEGTHDVHALILGRAITGLNGF 408
>sp|Q2KHZ9|GCDH_BOVIN Glutaryl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=GCDH
PE=2 SV=1
Length = 438
Score = 172 bits (437), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/287 (37%), Positives = 150/287 (52%), Gaps = 3/287 (1%)
Query: 1 MLTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAA--TKVEGGWILEG 58
M I GSE QK+KYLP LA+ + + LTEPNHGSD S + T A +IL G
Sbjct: 149 MYPIYAYGSEEQKQKYLPRLAKGELLGCFGLTEPNHGSDPSGMETRARHNPSSRSYILSG 208
Query: 59 QKRWIGNSTFADVLVVMARNTTTKKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFK 118
K WI NS AD+L+V AR I F+++K GL+ +IE K LR G I+
Sbjct: 209 SKTWITNSPVADLLIVWAR-CEDSCIRGFLLEKGMRGLSTPRIEGKFSLRASSTGMIIMD 267
Query: 119 KVFVPDEDRLPGFNSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPLA 178
V VP+E+ LPG + L+ AR + W +G + +Y ++R QFG PLA
Sbjct: 268 DVEVPEENVLPGVSGLAGPFGCLNNARYGITWGVLGAAEFCLHTARQYTLDRIQFGVPLA 327
Query: 179 AFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGRE 238
Q+ Q+KLA ML I +L R+ + K + SL K +A + R+
Sbjct: 328 KNQLIQKKLADMLTEITLGLHACLQLGRLKDQDKAAPEMVSLLKRNNCGKALDIARQARD 387
Query: 239 LLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITGFASF 285
+LGGNGI ++ V + + E +T EG++DI+ LI R ITG +F
Sbjct: 388 MLGGNGISDEYHVIRHVMNLESVNTYEGTHDIHALILGRAITGIQAF 434
>sp|Q54R47|GCDH_DICDI Glutaryl-CoA dehydrogenase, mitochondrial OS=Dictyostelium
discoideum GN=gcdh PE=3 SV=1
Length = 420
Score = 171 bits (433), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 106/286 (37%), Positives = 153/286 (53%), Gaps = 2/286 (0%)
Query: 1 MLTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGG-WILEGQ 59
M I T G++AQK KYL LA + + LTEPN GSD + + T A K G ++L G
Sbjct: 136 MHPINTFGTDAQKSKYLDGLASGDLVGCFGLTEPNAGSDPAGMQTRAVKNSAGNYVLNGT 195
Query: 60 KRWIGNSTFADVLVVMARNTTTKKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKK 119
K WI NS ADV VV A+ I F+++K GL+A KIE K+ LR G I+ +
Sbjct: 196 KTWITNSPIADVFVVWAK-VENGDIRGFVLEKGMKGLSAPKIEGKLSLRASITGMIVMED 254
Query: 120 VFVPDEDRLPGFNSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPLAA 179
V VP P + L+ AR + W ++G + Y +Y ++RKQFG PLAA
Sbjct: 255 VEVPPTAMFPEVKGLRGPFSCLNKARYGIGWGSLGAAEFCYSTARQYGLDRKQFGKPLAA 314
Query: 180 FQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGREL 239
Q+ Q+KLA M I +++ R+ + GK + + SL K ++ + R++
Sbjct: 315 NQLYQKKLADMATEISLGLQACYQVGRLIDAGKATPERISLIKRNSCGKSLDIARQSRDM 374
Query: 240 LGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITGFASF 285
LGGNGI ++ V + + E +T EG++DI+ LI R ITG SF
Sbjct: 375 LGGNGIADEYHVIRHAANLETVNTYEGTHDIHALILGRAITGIPSF 420
>sp|Q60759|GCDH_MOUSE Glutaryl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Gcdh
PE=2 SV=2
Length = 438
Score = 168 bits (426), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/287 (36%), Positives = 149/287 (51%), Gaps = 3/287 (1%)
Query: 1 MLTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAA--TKVEGGWILEG 58
M I T GSE Q++KYLP LA+ + + LTEPNHGSD + T A + L G
Sbjct: 149 MHPIYTYGSEEQRQKYLPGLAKGELLGCFGLTEPNHGSDPGGMETRARHNPSNQSYTLSG 208
Query: 59 QKRWIGNSTFADVLVVMARNTTTKKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFK 118
K WI NS AD+ +V AR I FI++K GL+A +IE K LR G I+
Sbjct: 209 TKTWITNSPVADLFIVWAR-CEDNCIRGFILEKGMRGLSAPRIEGKFSLRASATGMIIMD 267
Query: 119 KVFVPDEDRLPGFNSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPLA 178
V VP+E+ LP +S L+ AR + W +G + +Y ++R QFG PLA
Sbjct: 268 SVEVPEENVLPNVSSLAGPFGCLNTARYGITWGVLGAAEFCLHTARQYALDRIQFGVPLA 327
Query: 179 AFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGRE 238
Q+ Q+KLA ML I +L R+ + K + S+ K +A + R+
Sbjct: 328 RNQLVQKKLADMLTEITLGLHACLQLGRLKDQDKATPEMVSMLKRNNCGKALDIARQARD 387
Query: 239 LLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITGFASF 285
+LGGNGI ++ V + + E +T EG++DI+ LI R ITG +F
Sbjct: 388 ILGGNGISDEYHVIRHAMNLEAVNTYEGTHDIHALILGRAITGIQAF 434
>sp|Q8HXX8|GCDH_MACFA Glutaryl-CoA dehydrogenase, mitochondrial OS=Macaca fascicularis
GN=GCDH PE=2 SV=1
Length = 438
Score = 168 bits (425), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 106/287 (36%), Positives = 152/287 (52%), Gaps = 3/287 (1%)
Query: 1 MLTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAA--TKVEGGWILEG 58
M I GSE Q++KYLP LA+ + + LTEPN GSD S++ T A + L G
Sbjct: 149 MHPIYAYGSEEQRQKYLPRLAKGELLGCFGLTEPNSGSDPSSMETRARYNSSNKSYTLNG 208
Query: 59 QKRWIGNSTFADVLVVMARNTTTKKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFK 118
K WI NS AD+ VV AR +I F+++K GL+A +I+ K LR G I+
Sbjct: 209 TKTWITNSPMADLFVVWAR-CEDGRIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMD 267
Query: 119 KVFVPDEDRLPGFNSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPLA 178
V VP+E+ LPG +S + L+ R +AW +G S +Y ++R QFG PLA
Sbjct: 268 GVEVPEENMLPGASSLGGSFGCLNNGRYGIAWGVLGASEFCLHTARQYALDRMQFGVPLA 327
Query: 179 AFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGRE 238
Q+ Q+KLA ML I +L R+ + K + SL K +A + R+
Sbjct: 328 RNQLIQKKLADMLTEITLGLHACLQLGRLKDQDKAAPEMVSLLKRNNCGKALDIARQARD 387
Query: 239 LLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITGFASF 285
+LGGNGI ++ V + + E +T EG++DI+ LI R ITG +F
Sbjct: 388 MLGGNGISDEYHVIRHAMNLEAVNTYEGTHDIHALILGRAITGIQAF 434
>sp|Q92947|GCDH_HUMAN Glutaryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=GCDH
PE=1 SV=1
Length = 438
Score = 166 bits (421), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/287 (37%), Positives = 151/287 (52%), Gaps = 3/287 (1%)
Query: 1 MLTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAA--TKVEGGWILEG 58
M I GSE Q++KYLP LA+ + + LTEPN GSD S++ T A + L G
Sbjct: 149 MHPIYAYGSEEQRQKYLPQLAKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNG 208
Query: 59 QKRWIGNSTFADVLVVMARNTTTKKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFK 118
K WI NS AD+ VV AR I F+++K GL+A +I+ K LR G I+
Sbjct: 209 TKTWITNSPMADLFVVWAR-CEDGCIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMD 267
Query: 119 KVFVPDEDRLPGFNSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPLA 178
V VP+E+ LPG +S L+ AR +AW +G S +Y ++R QFG PLA
Sbjct: 268 GVEVPEENVLPGASSLGGPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLA 327
Query: 179 AFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGRE 238
Q+ Q+KLA ML I +L R+ + K + SL K +A + R+
Sbjct: 328 RNQLIQKKLADMLTEITLGLHACLQLGRLKDQDKAAPEMVSLLKRNNCGKALDIARQARD 387
Query: 239 LLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITGFASF 285
+LGGNGI ++ V + + E +T EG++DI+ LI R ITG +F
Sbjct: 388 MLGGNGISDEYHVIRHAMNLEAVNTYEGTHDIHALILGRAITGIQAF 434
>sp|P81140|GCDH_PIG Glutaryl-CoA dehydrogenase, mitochondrial (Fragment) OS=Sus scrofa
GN=GCDH PE=1 SV=1
Length = 408
Score = 161 bits (408), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 151/288 (52%), Gaps = 4/288 (1%)
Query: 1 MLTIATSGSEAQKR-KYLPSLAQLTTMASWALTEPNHGSDASALSTAA--TKVEGGWILE 57
M I GSE Q++ KYLP LA+ + + LTEPNHGSD ++ T A + L
Sbjct: 118 MHPIYAYGSEEQQQQKYLPRLAKGELLGCFGLTEPNHGSDPGSMETRALHNPSNRSYTLN 177
Query: 58 GQKRWIGNSTFADVLVVMARNTTTKKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILF 117
G K WI NS AD+ VV AR I F+++K GL+A KIE K LR G I+
Sbjct: 178 GAKTWITNSPVADLFVVWAR-CEDNCIRGFLLEKGMRGLSAPKIEGKFSLRASATGMIIM 236
Query: 118 KKVFVPDEDRLPGFNSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPL 177
V VP+E+ LP +S L+ AR ++W +G + +Y ++R QFG PL
Sbjct: 237 DDVEVPEENVLPKASSLAVPFGCLNNARYGISWGVLGAAEFCLHTARQYTLDRIQFGVPL 296
Query: 178 AAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGR 237
A Q+ Q+KLA ML I +L R+ + K++ SL K +A + R
Sbjct: 297 AKNQLIQRKLADMLTEITLGLHACLQLGRLKDQDKVTPEMVSLLKRNNCGKALDIARQAR 356
Query: 238 ELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITGFASF 285
++LGGNGI ++ V + + E +T EG++DI+ LI R ITG +F
Sbjct: 357 DMLGGNGISDEYHVIRHAMNLEAVNTYEGTHDIHALILGRAITGIQAF 404
>sp|Q9FS88|IVD1_SOLTU Isovaleryl-CoA dehydrogenase 1, mitochondrial OS=Solanum tuberosum
GN=IVD1 PE=2 SV=1
Length = 412
Score = 156 bits (394), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 148/283 (52%), Gaps = 10/283 (3%)
Query: 4 IATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWI 63
+ +G+ QK+KYLP L + + A++EPN GSD ++ A +V+GG++L G K W
Sbjct: 129 LVRNGTPDQKQKYLPKLISGDHIGALAMSEPNAGSDVVSMKCRADRVDGGYVLNGNKMWC 188
Query: 64 GNSTFADVLVVMARNTTT---KKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKV 120
N A+ L+V A+ TT K I AFI++K+ PG + + +K+G+R +++F+
Sbjct: 189 TNGPVANTLIVYAKTDTTAGSKGITAFIIEKEMPGFSTAQKLDKLGMRGSDTCELVFENC 248
Query: 121 FVPDEDRL----PGFNSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAP 176
FVP E+ L G L + R+++A +GI D+ Y+ +R+QFG P
Sbjct: 249 FVPKENVLGQEGKGVYVLMSG---LDLERLVLAAGPVGIMQACMDIVIPYVRQREQFGRP 305
Query: 177 LAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALG 236
+ FQ+ Q KLA M +Q+ + + + C+NGK+ S + RA +
Sbjct: 306 IGEFQLIQGKLADMYTALQSSRSYVYAVAKDCDNGKIDPKDCSGTILLAAERATQVALQA 365
Query: 237 RELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREI 279
+ LGGNG + ++ G+ D + + G+ +I L+ RE+
Sbjct: 366 IQCLGGNGYINEYPTGRLLRDAKMYEIAAGTSEIRRLVIGREL 408
>sp|Q9SWG0|IVD_ARATH Isovaleryl-CoA dehydrogenase, mitochondrial OS=Arabidopsis thaliana
GN=IVD PE=1 SV=2
Length = 409
Score = 151 bits (381), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 145/280 (51%), Gaps = 4/280 (1%)
Query: 4 IATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWI 63
+ +G+ AQK KYLP L + + A++EPN GSD + A KV+GG+IL G K W
Sbjct: 126 LVRNGTAAQKEKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKAEKVDGGYILNGNKMWC 185
Query: 64 GNSTFADVLVVMARNTT---TKKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKV 120
N A+ LVV A+ T +K I AFI++K G + + +K+G+R +++F+
Sbjct: 186 TNGPSAETLVVYAKTDTKAGSKGITAFIIEKGMTGFSTAQKLDKLGMRGSDTCELVFENC 245
Query: 121 FVPDEDRLPGFNSFQDTNIP-LSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPLAA 179
FVP+E+ L + L + R+++A +GI D Y+ +R+QFG P+
Sbjct: 246 FVPEENILDKEGKGVYVLMSGLDLERLVLAAGPLGIMQACLDNVLPYIRQREQFGRPVGE 305
Query: 180 FQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGREL 239
FQ Q K+A M +Q+ + + R C+NGK+ + + RA + +
Sbjct: 306 FQFIQGKVADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGTILCAAERATQVALQAIQC 365
Query: 240 LGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREI 279
LGGNG + ++ G+ D + + G G+ +I ++ RE+
Sbjct: 366 LGGNGYINEYATGRLLRDAKLYEIGAGTSEIRRIVIGREL 405
>sp|Q9FS87|IVD2_SOLTU Isovaleryl-CoA dehydrogenase 2, mitochondrial (Fragment) OS=Solanum
tuberosum GN=IVD2 PE=1 SV=1
Length = 401
Score = 147 bits (371), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 146/280 (52%), Gaps = 4/280 (1%)
Query: 4 IATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWI 63
+ +G+ QK+KYLP L + + A++EP+ GSD ++ A +VEGG++L G K W
Sbjct: 118 LVRNGTHEQKQKYLPKLISGEHVGALAMSEPDAGSDVVSMKCKADRVEGGYVLNGNKMWC 177
Query: 64 GNSTFADVLVVMARNTTT---KKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKV 120
N A LVV A+ T K I AFI++K G + + +K+G+R +++F+
Sbjct: 178 TNGPTAQTLVVYAKTDVTASSKGITAFIIEKGMTGFSTAQKLDKLGMRGSDTCELVFENC 237
Query: 121 FVPDEDRLPGFNSFQDTNIP-LSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPLAA 179
FVP+E+ L + L + R+++A +GI D+ Y+ +R+QFG P+
Sbjct: 238 FVPEENVLGQVGKGVYVLMSGLDLERLVLASGPVGIMQACLDVVLPYVKQREQFGRPIGE 297
Query: 180 FQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGREL 239
FQ Q K+A M ++Q+ + + R C++G ++ + + RA + +
Sbjct: 298 FQFVQGKVADMYTSMQSSRSYLYSVARECDSGTINTKDCAGVILSAAERATQVALQAIQC 357
Query: 240 LGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREI 279
LGGNG V ++ G+ D + + G G+ +I +I RE+
Sbjct: 358 LGGNGYVNEYPTGRFLRDAKLYEIGAGTSEIRRMIIGREL 397
>sp|P12007|IVD_RAT Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus
GN=Ivd PE=1 SV=2
Length = 424
Score = 142 bits (359), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 145/285 (50%), Gaps = 16/285 (5%)
Query: 4 IATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWI 63
I +G+EAQK KYLP L + + A++EPN GSD ++ A K ++L G K WI
Sbjct: 138 IVRNGNEAQKEKYLPKLISGEFIGALAMSEPNAGSDVVSMRLKAEKKGDHYVLNGNKFWI 197
Query: 64 GNSTFADVLVVMARNTTT-----KKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFK 118
N ADVLVV A+ T + I AFIV+KD PG + +K +K+G+R +++F+
Sbjct: 198 TNGPDADVLVVYAKTDLTAVPASRGITAFIVEKDMPGFSTSKKLDKLGMRGSNTCELVFE 257
Query: 119 KVFVPDEDRLPGFNSFQDTNI-----PLSVARVMVAWQTIGISIGVYDMCYRYLMERKQF 173
VP + L S + + L + R+++A +GI V D YL R+ F
Sbjct: 258 DCKVPAANIL----SQESKGVYVLMSGLDLERLVLAGGPLGIMQAVLDHTIPYLHVREAF 313
Query: 174 GAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETV 233
G + FQ+ Q K+A M + A + + R C+ G ++ + G +A V
Sbjct: 314 GQKIGQFQLMQGKMADMYTRLMACRQYVYNVARACDEGHITAKDCA-GVILYTAECATQV 372
Query: 234 AL-GRELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAR 277
AL G + LGGNG + DF +G+ D + + G G+ ++ L+ R
Sbjct: 373 ALDGIQCLGGNGYINDFPMGRFLRDAKLYEIGGGTSEVRRLVIGR 417
>sp|O32176|FADE_BACSU Probable acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168)
GN=fadE PE=2 SV=1
Length = 594
Score = 141 bits (356), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 147/296 (49%), Gaps = 25/296 (8%)
Query: 2 LTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGG--WILEGQ 59
L I GSE QK+KYLP LA +A++ALTEP GSDA T A E G ++L G+
Sbjct: 121 LPIVFFGSEEQKKKYLPGLASGEKIAAYALTEPGSGSDALGAKTTAVLNEAGTHYVLTGE 180
Query: 60 KRWIGNSTFADVLVVMARNTTTKKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKK 119
K+WI NS FADV VV A+ K +AFIV+K+ PG++ E K+G++ ++ +
Sbjct: 181 KQWITNSAFADVFVVYAK-VDGDKFSAFIVEKEFPGVSTGPEEKKMGIKGSSTRTLILDQ 239
Query: 120 VFVPDEDRLP--GFNSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPL 177
VP E+ L G NI L++ R +A TIG S V ++ Y +R+QF P+
Sbjct: 240 AEVPKENLLGEIGKGHVIAFNI-LNIGRYKLAVGTIGASKRVIELSAAYANQRRQFKTPI 298
Query: 178 AAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLG-------------------QA 218
A F +TQ+K+ M + AM +R + E+ +
Sbjct: 299 AGFSLTQEKIGTMASRLYAMESSVYRTVGLFEDNMSQFTAEDLKDGRQIAKSIAEYAIEC 358
Query: 219 SLGKAWVSARARETVALGRELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLI 274
SL K + S V G ++ GG G + ++ V +A+ D EG+ +IN LI
Sbjct: 359 SLNKVFGSETLDYIVDEGVQIHGGYGFMQEYEVERAYRDSRINRIFEGTNEINRLI 414
>sp|P45954|ACDSB_HUMAN Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Homo sapiens GN=ACADSB PE=1 SV=1
Length = 432
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 147/282 (52%), Gaps = 9/282 (3%)
Query: 4 IATSGSEAQKRKYLPSLAQLTT--MASWALTEPNHGSDASALSTAATKVEGGWILEGQKR 61
I G+E QK YLP QLTT + S+ L+E GSD+ AL T A K ++L G K
Sbjct: 150 IRKHGTEEQKATYLP---QLTTEKVGSFCLSEAGAGSDSFALKTRADKEGDYYVLNGSKM 206
Query: 62 WIGNSTFADVLVVMARNTTT---KKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFK 118
WI ++ A + +VMA T K I +F+V +D PGL K ENK+GLR + F+
Sbjct: 207 WISSAEHAGLFLVMANVDPTIGYKGITSFLVDRDTPGLHIGKPENKLGLRASSTCPLTFE 266
Query: 119 KVFVPDEDRLPGF-NSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPL 177
V VP+ + L + ++ L+ R+ +A Q +G++ G +D Y+ ER QFG L
Sbjct: 267 NVKVPEANILGQIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKRL 326
Query: 178 AAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGR 237
FQ Q ++A + ++A L+ + R+ E GK + +AS+ K + S A +T +
Sbjct: 327 FDFQGLQHQVAHVATQLEAARLLTYNAARLLEAGKPFIKEASMAKYYASEIAGQTTSKCI 386
Query: 238 ELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREI 279
E +GG G D+ V K F D + EG+ +I A+ I
Sbjct: 387 EWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQLNTIAKHI 428
>sp|Q5RF40|ACDSB_PONAB Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Pongo abelii GN=ACADSB PE=2 SV=1
Length = 432
Score = 139 bits (350), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 147/282 (52%), Gaps = 9/282 (3%)
Query: 4 IATSGSEAQKRKYLPSLAQLTT--MASWALTEPNHGSDASALSTAATKVEGGWILEGQKR 61
I G+E QK YLP QLTT + S+ L+E GSD+ AL T A K ++L G K
Sbjct: 150 IRKHGTEEQKGTYLP---QLTTEKVGSFCLSEAGAGSDSFALKTRADKEGDYYVLNGSKM 206
Query: 62 WIGNSTFADVLVVMARNTTT---KKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFK 118
WI ++ A + +VMA T K I +F+V +D PGL K ENK+GLR + F+
Sbjct: 207 WISSAEHAGLFLVMANVDPTIGYKGITSFLVDRDTPGLHIGKPENKLGLRASSTCPLTFE 266
Query: 119 KVFVPDEDRLPGF-NSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPL 177
V VP+ + L + ++ L+ R+ +A Q +G++ G +D Y+ ER QFG L
Sbjct: 267 NVKVPETNILGQIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKRL 326
Query: 178 AAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGR 237
FQ Q ++A + ++A L+ + R+ E GK + +AS+ K + S A +T +
Sbjct: 327 FDFQGLQHQVAHVATQLEAARLLTYNAARLLEAGKPFIKEASMAKYYASEIAGQTTSKCI 386
Query: 238 ELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREI 279
E +GG G D+ V K F D + EG+ +I A+ I
Sbjct: 387 EWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQLNTIAKHI 428
>sp|Q54RR5|ACDSB_DICDI Probable short/branched chain specific acyl-CoA dehydrogenase
OS=Dictyostelium discoideum GN=acadsb PE=3 SV=1
Length = 413
Score = 139 bits (350), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/278 (35%), Positives = 144/278 (51%), Gaps = 6/278 (2%)
Query: 8 GSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATK-VEGGWILEGQKRWIGNS 66
GS Q+ KYL LA T+ S+ L+E GSDA AL+T A + +G ++L G K+WI N+
Sbjct: 132 GSIQQREKYLSMLAT-NTVGSFCLSESGSGSDAFALATRAVRQSDGTFVLNGTKQWITNA 190
Query: 67 TFADVLVVMARNTTT---KKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVP 123
A V +VMA + K I AFIV+ + PGL K E+K+G+R +++ V
Sbjct: 191 KEAGVFIVMANVDPSQGYKGITAFIVESNNPGLRIGKKEDKLGIRASSTCEVILDNCVVK 250
Query: 124 DEDRLPGFNSFQDTNIP-LSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPLAAFQI 182
D L I L+ R+ +A Q +G++ GV+D YLMERKQFG P+A FQ
Sbjct: 251 PTDILGELGRGYKIAIEGLNEGRIGIAAQMLGLAQGVFDSTIPYLMERKQFGKPIATFQG 310
Query: 183 TQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGRELLGG 242
Q A + +I+A L+ + R+ E G + QAS+ K S A + + +LGG
Sbjct: 311 MQFTYADLAVDIEAGRLLTYNAARIKEAGLPFVFQASMAKLHCSRVAEKAASACISMLGG 370
Query: 243 NGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREIT 280
G +F K F D + EG+ +I A+EI
Sbjct: 371 VGFTKEFPAEKFFRDSKVGQIYEGTSNIQLQTIAKEIV 408
>sp|Q3SZI8|IVD_BOVIN Isovaleryl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=IVD
PE=2 SV=1
Length = 426
Score = 139 bits (349), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 140/281 (49%), Gaps = 8/281 (2%)
Query: 4 IATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWI 63
I +G+E QK KYLP L + + A++EPN GSD ++ A K ++L G K WI
Sbjct: 140 IVRNGNETQKEKYLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEKKGDHYVLNGNKFWI 199
Query: 64 GNSTFADVLVVMARNTTT-----KKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFK 118
N ADVLVV A+ T + I AFIV+K PG + +K +K+G+R +++F+
Sbjct: 200 TNGPDADVLVVYAKTDVTAVPASRGITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELVFE 259
Query: 119 KVFVPDEDRLPGFNSFQDTNIP-LSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPL 177
VP + L + L + R+++A +GI V D YL R+ FG +
Sbjct: 260 DCEVPAANILGHLGKGVYVLMSGLDLERLVLAGGPLGIMQAVLDHTIPYLHMREAFGQKI 319
Query: 178 AAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVAL-G 236
FQ+ Q K+A M + A + + + C+ G + + G SA VAL G
Sbjct: 320 GHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTTKDCA-GVILYSAECATQVALDG 378
Query: 237 RELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAR 277
+ LGGNG + DF +G+ D + + G G+ ++ L+ R
Sbjct: 379 IQCLGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVIGR 419
>sp|Q9JHI5|IVD_MOUSE Isovaleryl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Ivd
PE=1 SV=1
Length = 424
Score = 137 bits (346), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 144/285 (50%), Gaps = 16/285 (5%)
Query: 4 IATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWI 63
I +G+EAQK KYLP L + + A++EPN GSD ++ A K ++L G K WI
Sbjct: 138 IVRNGNEAQKEKYLPKLISGEFIGALAMSEPNAGSDVVSMKLKAEKKGDHYVLNGNKFWI 197
Query: 64 GNSTFADVLVVMARNTTT-----KKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFK 118
N AD+LVV A+ T + I AFIV+K PG + +K +K+G+R +++F+
Sbjct: 198 TNGPDADILVVYAKTDLTAVPASRGITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELVFE 257
Query: 119 KVFVPDEDRLPGFNSFQDTNI-----PLSVARVMVAWQTIGISIGVYDMCYRYLMERKQF 173
VP + L S + + L + R+++A +GI V D YL R+ F
Sbjct: 258 DCKVPAANVL----SQESKGVYVLMSGLDLERLVLAGGPLGIMQAVLDHTIPYLHVREAF 313
Query: 174 GAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETV 233
G + FQ+ Q K+A M + A + + + C+ G + + + G +A V
Sbjct: 314 GQKIGQFQLMQGKMADMYTRLMASRQYVYNVAKACDEGHI-IPKDCAGVILYAAECATQV 372
Query: 234 AL-GRELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAR 277
AL G + LGGNG + DF +G+ D + + G G+ ++ L+ R
Sbjct: 373 ALDGIQCLGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVIGR 417
>sp|P15651|ACADS_RAT Short-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Rattus norvegicus GN=Acads PE=1 SV=2
Length = 412
Score = 137 bits (345), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 137/274 (50%), Gaps = 6/274 (2%)
Query: 8 GSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNST 67
GS QK++++ + +AL+EP +GSDA A ST A + W+L G K WI NS
Sbjct: 131 GSSQQKQQWITPFTNGDKIGCFALSEPGNGSDAGAASTTAREEGDSWVLNGTKAWITNSW 190
Query: 68 FADVLVVMA---RNTTTKKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPD 124
A VV A R+ K I+AF+V PGLT K E+K+G+R +++F+ +P
Sbjct: 191 EASATVVFASTDRSRQNKGISAFLVPMPTPGLTLGKKEDKLGIRASSTANLIFEDCRIPK 250
Query: 125 EDRL--PGFNSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPLAAFQI 182
E+ L PG F+ L + R+ +A Q +GI+ D +Y R FGAPL Q
Sbjct: 251 ENLLGEPGMG-FKIAMQTLDMGRIGIASQALGIAQASLDCAVKYAENRHAFGAPLTKLQN 309
Query: 183 TQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGRELLGG 242
Q KLA M +++ L+ WR + +N K ++++ K S A ++LGG
Sbjct: 310 IQFKLADMALALESARLLTWRAAMLKDNKKPFTKESAMAKLAASEAATAISHQAIQILGG 369
Query: 243 NGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAA 276
G VT+ + + D EG+ +I L+ A
Sbjct: 370 MGYVTEMPAERYYRDARITEIYEGTSEIQRLVIA 403
>sp|Q5RBD5|IVD_PONAB Isovaleryl-CoA dehydrogenase, mitochondrial OS=Pongo abelii GN=IVD
PE=2 SV=1
Length = 423
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 141/281 (50%), Gaps = 8/281 (2%)
Query: 4 IATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWI 63
+ +G+EAQK KYLP L + + A++EPN GSD ++ A K +IL G K WI
Sbjct: 137 LVRNGNEAQKEKYLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEKKGNHYILNGNKFWI 196
Query: 64 GNSTFADVLVVMARNT-----TTKKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFK 118
N ADVL+V A+ ++ I AFIV+K PG + +K +K+G+R +++F+
Sbjct: 197 TNGPDADVLIVYAKTDLAAVPASRGITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELIFE 256
Query: 119 KVFVPDEDRLPGFNSFQDTNIP-LSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPL 177
VP + L N + L + R+++A +G+ V D YL R+ FG +
Sbjct: 257 DCKVPAANILGHENKGVYVLMSGLDLERLVLAGGPLGLMQAVLDHTIPYLHVREAFGQKI 316
Query: 178 AAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVAL-G 236
FQ+ Q K+A M + A + + + C+ G + + G SA VAL G
Sbjct: 317 GHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCA-GVILYSAECATQVALDG 375
Query: 237 RELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAR 277
+ GGNG + DF +G+ D + + G G+ ++ L+ R
Sbjct: 376 IQCFGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVIGR 416
>sp|Q07417|ACADS_MOUSE Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus
musculus GN=Acads PE=2 SV=2
Length = 412
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 137/274 (50%), Gaps = 6/274 (2%)
Query: 8 GSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNST 67
GS QK++++ + +AL+EP +GSDA A ST A + W+L G K WI NS
Sbjct: 131 GSAQQKQQWITPFTNGDKIGCFALSEPGNGSDAGAASTTAREEGDSWVLNGTKAWITNSW 190
Query: 68 FADVLVVMA---RNTTTKKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPD 124
A VV A R+ K I+AF+V PGLT K E+K+G+R +++F+ +P
Sbjct: 191 EASATVVFASTDRSRQNKGISAFLVPMPTPGLTLGKKEDKLGIRASSTANLIFEDCRIPK 250
Query: 125 EDRL--PGFNSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPLAAFQI 182
E+ L PG F+ L + R+ +A Q +GI+ D +Y R FGAPL Q
Sbjct: 251 ENLLGEPGMG-FKIAMQTLDMGRIGIASQALGIAQASLDCAVKYAENRNAFGAPLTKLQN 309
Query: 183 TQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGRELLGG 242
Q KLA M +++ L+ WR + +N K ++++ K S A ++LGG
Sbjct: 310 IQFKLADMALALESARLLTWRAAMLKDNKKPFTKESAMAKLAASEAATAISHQAIQILGG 369
Query: 243 NGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAA 276
G VT+ + + D EG+ +I L+ A
Sbjct: 370 MGYVTEMPAERYYRDARITEIYEGTSEIQRLVIA 403
>sp|O34421|ACDC_BACSU Probable acyl-CoA dehydrogenase YngJ OS=Bacillus subtilis (strain
168) GN=yngJ PE=3 SV=1
Length = 380
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 139/280 (49%), Gaps = 11/280 (3%)
Query: 8 GSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNST 67
G+E QK+ +L LA T + S+ LTEPN GSDA T A +++ G+K WI N++
Sbjct: 102 GTEEQKQTHLTPLASGTALGSFGLTEPNAGSDAGGTQTKAISNGDEYVINGEKCWITNAS 161
Query: 68 FADVLVVMARNTTTKK----INAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVP 123
+A ++V A K I+A IV D PGLT T +K+G+R +IL + V VP
Sbjct: 162 YARTVIVTAVTGKNKDGKNIISALIVPTDTPGLTITSPYDKMGVRGSNTAEILLEDVRVP 221
Query: 124 DE----DRLPGFNSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPLAA 179
D GF F T L R+ +A +GI+ D Y ERKQFG P+++
Sbjct: 222 AANLLGDPTKGFKQFLYT---LDGGRISIAALAVGIAQAALDASLAYAKERKQFGQPISS 278
Query: 180 FQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGREL 239
FQ Q KLA M I + + + ++ + +A+ K + S A ++
Sbjct: 279 FQAIQFKLADMAMEIDLARQMVLKAAWLKDHNRPFTKEAAYAKLFASEMATRACNQAIQI 338
Query: 240 LGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREI 279
GG+G + ++ V + D + GEG+ +I L+ AR++
Sbjct: 339 HGGSGYMKEYGVERMLRDAKLMEIGEGTSEIQRLVIARQL 378
>sp|P26440|IVD_HUMAN Isovaleryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=IVD
PE=1 SV=1
Length = 423
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 141/281 (50%), Gaps = 8/281 (2%)
Query: 4 IATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWI 63
+ +G+EAQK KYLP L + + A++EPN GSD ++ A K +IL G K WI
Sbjct: 137 LVRNGNEAQKEKYLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEKKGNHYILNGNKFWI 196
Query: 64 GNSTFADVLVVMARNT-----TTKKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFK 118
N ADVL+V A+ ++ I AFIV+K PG + +K +K+G+R +++F+
Sbjct: 197 TNGPDADVLIVYAKTDLAAVPASRGITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELIFE 256
Query: 119 KVFVPDEDRLPGFNSFQDTNIP-LSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPL 177
+P + L N + L + R+++A +G+ V D YL R+ FG +
Sbjct: 257 DCKIPAANILGHENKGVYVLMSGLDLERLVLAGGPLGLMQAVLDHTIPYLHVREAFGQKI 316
Query: 178 AAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVAL-G 236
FQ+ Q K+A M + A + + + C+ G + + G SA VAL G
Sbjct: 317 GHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCA-GVILYSAECATQVALDG 375
Query: 237 RELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAR 277
+ GGNG + DF +G+ D + + G G+ ++ L+ R
Sbjct: 376 IQCFGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVIGR 416
>sp|Q5RAS0|ACADS_PONAB Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pongo
abelii GN=ACADS PE=2 SV=1
Length = 412
Score = 136 bits (342), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 136/274 (49%), Gaps = 6/274 (2%)
Query: 8 GSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNST 67
GS+ QK+K++ + +AL+EP +GSDA A ST A W+L G K WI N+
Sbjct: 131 GSKEQKQKWVTPFTSGDKIGCFALSEPGNGSDAGAASTTARAEGDSWVLNGTKAWITNAW 190
Query: 68 FADVLVVMA---RNTTTKKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPD 124
A VV A R K I+AF+V PGLT K E+K+G+R +++F+ +P
Sbjct: 191 EASAAVVFASTDRALQNKGISAFLVPMPTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPK 250
Query: 125 EDRL--PGFNSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPLAAFQI 182
+ L PG F+ L + R+ +A Q +GI+ D Y R FGAPL Q+
Sbjct: 251 DSILGEPGMG-FKIAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQV 309
Query: 183 TQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGRELLGG 242
Q KLA M +++ L+ WR + +N K + +A++ K S A ++LGG
Sbjct: 310 IQFKLADMALALESARLLTWRAAMLKDNKKPFIKEAAMAKLAASEAATAISHQAIQILGG 369
Query: 243 NGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAA 276
G VT+ + + D EG+ +I L+ A
Sbjct: 370 MGYVTEMPAERHYRDARITEIYEGTSEIQRLVIA 403
>sp|P45857|ACDB_BACSU Acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168) GN=mmgC
PE=2 SV=3
Length = 379
Score = 135 bits (339), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 140/278 (50%), Gaps = 4/278 (1%)
Query: 8 GSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNST 67
G+E QK KY+P+LA + ++ALTEP+ GSDA +L T A K G ++L G K +I N
Sbjct: 100 GNEEQKMKYIPNLASGDHLGAFALTEPHSGSDAGSLRTTAIKKNGKYLLNGSKIFITNGG 159
Query: 68 FADVLVVMARNTTTK---KINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPD 124
AD+ + A + I+AFIV+K+ PG T K E K+GL +++F VP+
Sbjct: 160 AADIYITFALTAPDQGRHGISAFIVEKNTPGFTVGKKERKLGLYGSNTTELIFDNAEVPE 219
Query: 125 EDRL-PGFNSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPLAAFQIT 183
+ L + F L+V R+ +A Q +GI+ + Y +R QFG P+AA Q
Sbjct: 220 ANLLGKEGDGFHIAMANLNVGRIGIAAQALGIAEAALEHAVDYAKQRVQFGRPIAANQGI 279
Query: 184 QQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGRELLGGN 243
KLA M +A + + + G +AS+ K + S A + ++ GG
Sbjct: 280 SFKLADMATRAEAARHLVYHAADLHNRGLNCGKEASMAKQFASDAAVKAALDAVQIYGGY 339
Query: 244 GIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITG 281
G + D+ V + D + EG+ +I LI ++ + G
Sbjct: 340 GYMKDYPVERLLRDAKVTQIYEGTNEIQRLIISKYLLG 377
>sp|Q9VSA3|ACADM_DROME Probable medium-chain specific acyl-CoA dehydrogenase,
mitochondrial OS=Drosophila melanogaster GN=CG12262 PE=1
SV=1
Length = 419
Score = 134 bits (337), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 139/281 (49%), Gaps = 9/281 (3%)
Query: 7 SGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNS 66
SG++ QK+KYL L + +A++ +TEP GSD S + T A K W++ GQK WI N
Sbjct: 132 SGNKEQKKKYLGRLLEEPLVAAYCVTEPGAGSDVSGIKTRAEKKGDEWVINGQKMWITNG 191
Query: 67 TFADVLVVMARNT------TTKKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKV 120
A+ V+AR +K FIV++D+PGLT + E +G R I F+ V
Sbjct: 192 GVANWYFVLARTNPDPKCPPSKAFTGFIVERDSPGLTPGRKELNMGQRASDTRGITFEDV 251
Query: 121 FVPDEDRLPGFNS-FQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPLAA 179
VP E+ L G + F+ R VA +G++ D +Y +ERK FG P+A
Sbjct: 252 RVPKENVLIGEGAGFKIAMGTFDKTRPPVAAGAVGLAQRCLDEALKYALERKTFGVPIAY 311
Query: 180 FQITQQKLAQMLGNIQAMNLVGWRLCR-MCENGKMSLGQASLGKAWVSARARETVALGRE 238
Q Q LA M ++ L WRL + G+ + AS+ K + A + + +
Sbjct: 312 HQAVQFMLADMAIGVETSRLA-WRLSAWEIDQGRRNSYYASIAKCHAADMANKIASDAVQ 370
Query: 239 LLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREI 279
+ GGNG +++ V K D + + EG+ I LI +R +
Sbjct: 371 IFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRLIISRNM 411
>sp|P16219|ACADS_HUMAN Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo
sapiens GN=ACADS PE=1 SV=1
Length = 412
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 135/274 (49%), Gaps = 6/274 (2%)
Query: 8 GSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNST 67
GS+ QK+ ++ + +AL+EP +GSDA A ST A W+L G K WI N+
Sbjct: 131 GSKEQKQAWVTPFTSGDKIGCFALSEPGNGSDAGAASTTARAEGDSWVLNGTKAWITNAW 190
Query: 68 FADVLVVMA---RNTTTKKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPD 124
A VV A R K I+AF+V PGLT K E+K+G+R +++F+ +P
Sbjct: 191 EASAAVVFASTDRALQNKGISAFLVPMPTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPK 250
Query: 125 EDRL--PGFNSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPLAAFQI 182
+ L PG F+ L + R+ +A Q +GI+ D Y R FGAPL Q+
Sbjct: 251 DSILGEPGMG-FKIAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQV 309
Query: 183 TQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGRELLGG 242
Q KLA M +++ L+ WR + +N K + +A++ K S A ++LGG
Sbjct: 310 IQFKLADMALALESARLLTWRAAMLKDNKKPFIKEAAMAKLAASEAATAISHQAIQILGG 369
Query: 243 NGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAA 276
G VT+ + + D EG+ +I L+ A
Sbjct: 370 MGYVTEMPAERHYRDARITEIYEGTSEIQRLVIA 403
>sp|P63427|ACDP_MYCTU Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium
tuberculosis GN=fadE25 PE=3 SV=1
Length = 389
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 135/279 (48%), Gaps = 9/279 (3%)
Query: 8 GSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWI---G 64
GSE K++ LP+LA MAS+AL+E GSDA+++ T A WIL G K WI G
Sbjct: 111 GSEELKKQVLPALAAEGAMASYALSEREAGSDAASMRTRAKADGDHWILNGAKCWITNGG 170
Query: 65 NSTFADVLVVMARNTTTKKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPD 124
ST+ V+ V + I+AF+V KD G T E K+G++ ++ F+ +P
Sbjct: 171 KSTWYTVMAVTDPDRGANGISAFMVHKDDEGFTVGPKERKLGIKGSPTTELYFENCRIPG 230
Query: 125 EDRL---PGFNSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPLAAFQ 181
DR+ PG F+ L R + Q +GI+ G D Y +RKQFG ++ FQ
Sbjct: 231 -DRIIGEPG-TGFKTALATLDHTRPTIGAQAVGIAQGALDAAIAYTKDRKQFGESISTFQ 288
Query: 182 ITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLG-KAWVSARARETVALGRELL 240
Q LA M ++A L+ + E G+ LG S K + S A E +L
Sbjct: 289 AVQFMLADMAMKVEAARLMVYSAAARAERGEPDLGFISAASKCFASDVAMEVTTDAVQLF 348
Query: 241 GGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREI 279
GG G TDF V + D + EG+ I ++ +R +
Sbjct: 349 GGAGYTTDFPVERFMRDAKITQIYEGTNQIQRVVMSRAL 387
>sp|P63428|ACDP_MYCBO Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=fadE25 PE=3 SV=1
Length = 389
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 135/279 (48%), Gaps = 9/279 (3%)
Query: 8 GSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWI---G 64
GSE K++ LP+LA MAS+AL+E GSDA+++ T A WIL G K WI G
Sbjct: 111 GSEELKKQVLPALAAEGAMASYALSEREAGSDAASMRTRAKADGDHWILNGAKCWITNGG 170
Query: 65 NSTFADVLVVMARNTTTKKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPD 124
ST+ V+ V + I+AF+V KD G T E K+G++ ++ F+ +P
Sbjct: 171 KSTWYTVMAVTDPDRGANGISAFMVHKDDEGFTVGPKERKLGIKGSPTTELYFENCRIPG 230
Query: 125 EDRL---PGFNSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPLAAFQ 181
DR+ PG F+ L R + Q +GI+ G D Y +RKQFG ++ FQ
Sbjct: 231 -DRIIGEPG-TGFKTALATLDHTRPTIGAQAVGIAQGALDAAIAYTKDRKQFGESISTFQ 288
Query: 182 ITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLG-KAWVSARARETVALGRELL 240
Q LA M ++A L+ + E G+ LG S K + S A E +L
Sbjct: 289 AVQFMLADMAMKVEAARLMVYSAAARAERGEPDLGFISAASKCFASDVAMEVTTDAVQLF 348
Query: 241 GGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREI 279
GG G TDF V + D + EG+ I ++ +R +
Sbjct: 349 GGAGYTTDFPVERFMRDAKITQIYEGTNQIQRVVMSRAL 387
>sp|P46703|ACDP_MYCLE Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium leprae
(strain TN) GN=fadE25 PE=3 SV=1
Length = 389
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 135/279 (48%), Gaps = 9/279 (3%)
Query: 8 GSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWI---G 64
GSE K++ LPSLA MAS+AL+E GSDA+++ T A WIL G K WI G
Sbjct: 111 GSEELKKQVLPSLAAEGAMASYALSEREAGSDAASMRTRAKADGDDWILNGFKCWITNGG 170
Query: 65 NSTFADVLVVMARNTTTKKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPD 124
ST+ V+ V + I+AFIV KD G + E K+G++ ++ F K +P
Sbjct: 171 KSTWYTVMAVTDPDKGANGISAFIVHKDDEGFSIGPKEKKLGIKGSPTTELYFDKCRIPG 230
Query: 125 EDRL---PGFNSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPLAAFQ 181
DR+ PG F+ L R + Q +GI+ G D Y +RKQFG ++ FQ
Sbjct: 231 -DRIIGEPG-TGFKTALATLDHTRPTIGAQAVGIAQGALDAAIVYTKDRKQFGESISTFQ 288
Query: 182 ITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLG-KAWVSARARETVALGRELL 240
Q LA M ++A L+ + E G+ LG S K + S A E +L
Sbjct: 289 SIQFMLADMAMKVEAARLIVYAAAARAERGEPDLGFISAASKCFASDIAMEVTTDAVQLF 348
Query: 241 GGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREI 279
GG G +DF V + D + EG+ I ++ +R +
Sbjct: 349 GGAGYTSDFPVERFMRDAKITQIYEGTNQIQRVVMSRAL 387
>sp|Q22347|ACADM_CAEEL Probable medium-chain specific acyl-CoA dehydrogenase 10,
mitochondrial OS=Caenorhabditis elegans GN=acdh-10 PE=2
SV=1
Length = 417
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 136/286 (47%), Gaps = 9/286 (3%)
Query: 4 IATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWI 63
+ SG+E QK+KYL +LA +AS+ +TEP GSD + + T K +I+ G K WI
Sbjct: 123 VYISGNEEQKKKYLGALAAEPIIASYCVTEPGAGSDVNGVKTKCEKKGDEYIINGSKAWI 182
Query: 64 GNSTFADVLVVMARNTTTKK------INAFIVKKDAPGLTATKIENKIGLRMLQNGDILF 117
A V+AR+ K AFIV D PG+T K E +G R I F
Sbjct: 183 TGGGHAKWFFVLARSDPNPKTPAGKAFTAFIVDGDTPGITRGKKEKNMGQRCSDTRVITF 242
Query: 118 KKVFVPDEDRL--PGFNSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGA 175
+ V VP E+ L PG F+ + R VA +G+S D +Y +ERK FG
Sbjct: 243 EDVRVPAENVLGAPG-AGFKVAMEAFDMTRPGVAAGALGLSWRCLDESAKYALERKAFGT 301
Query: 176 PLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVAL 235
+A Q Q LA M N++ L+ ++ +N S AS+ K + + A +
Sbjct: 302 VIANHQAVQFMLADMAVNLELARLITYKSANDVDNKVRSSYNASIAKCFAADTANQAATN 361
Query: 236 GRELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITG 281
++ GGNG +++ V K D + + EG+ I ++ +R + G
Sbjct: 362 AVQIFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRIVISRMLLG 407
>sp|Q9DBL1|ACDSB_MOUSE Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Mus musculus GN=Acadsb PE=1 SV=1
Length = 432
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 140/275 (50%), Gaps = 5/275 (1%)
Query: 9 SEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNSTF 68
SE QK YLP L + S+ L+E GSD+ A+ T A K ++L G K WI ++
Sbjct: 155 SEEQKATYLPKLVT-EKLGSFCLSEAGAGSDSFAMKTRADKSGNYYVLNGSKMWISHAEH 213
Query: 69 ADVLVVMAR---NTTTKKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPDE 125
A++ +V A ++ + I F+V +D G K ENK+G+R + F+ V VP+
Sbjct: 214 AELFLVFANVDPSSGYRGITCFLVDRDTEGFQIGKRENKMGIRASSTCQLTFENVKVPET 273
Query: 126 DRLPGF-NSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPLAAFQITQ 184
+ L + ++ L+ R+ +A Q +G++ G +D Y+ ER QFG + FQ Q
Sbjct: 274 NILGKIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERMQFGKRIFDFQGLQ 333
Query: 185 QKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGRELLGGNG 244
++AQ+ ++A L+ + R+ E G+ + +AS+ K + S A T + E +GG G
Sbjct: 334 HQVAQVATQLEATRLLTYNAARLVEAGRPFIKEASMAKYYASEVAGLTTSKCIEWMGGVG 393
Query: 245 IVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREI 279
D+ V K F D + EG+ +I A+ I
Sbjct: 394 YTKDYPVEKFFRDAKIGTIYEGASNIQLNTIAKHI 428
>sp|P11310|ACADM_HUMAN Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo
sapiens GN=ACADM PE=1 SV=1
Length = 421
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 138/284 (48%), Gaps = 7/284 (2%)
Query: 2 LTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKR 61
+ I +G++ QK+KYL + + M ++ +TEP GSD + + T A K +I+ GQK
Sbjct: 131 MPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKM 190
Query: 62 WIGNSTFADVLVVMARNTTTKKINA------FIVKKDAPGLTATKIENKIGLRMLQNGDI 115
WI N A+ ++AR+ K A FIV+ D PG+ + E +G R I
Sbjct: 191 WITNGGKANWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQRCSDTRGI 250
Query: 116 LFKKVFVPDEDRLPGFNS-FQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFG 174
+F+ V VP E+ L G + F+ R +VA +G++ D +Y +ERK FG
Sbjct: 251 VFEDVKVPKENVLIGDGAGFKVAMGAFDKTRPVVAAGAVGLAQRALDEATKYALERKTFG 310
Query: 175 APLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVA 234
L Q LA+M ++ + R ++G+ + AS+ KA+ A +
Sbjct: 311 KLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNTYYASIAKAFAGDIANQLAT 370
Query: 235 LGRELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAARE 278
++LGGNG T++ V K D + + EG+ I LI ARE
Sbjct: 371 DAVQILGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIVARE 414
>sp|P45867|ACDA_BACSU Acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168) GN=acdA
PE=2 SV=1
Length = 379
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 136/278 (48%), Gaps = 12/278 (4%)
Query: 8 GSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNST 67
G+E QK +YL LA + ++ALTE GSDA ++ T A ++ ++L G K +I N
Sbjct: 102 GTEEQKTEYLTQLALGEKIGAFALTEAGSGSDAGSMKTTAERIGDDYVLNGSKVFITNGG 161
Query: 68 FADVLVVMARNTTTKK---INAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPD 124
AD+ +V A KK + AFIV+KD G K E K+G+R +I+F+ VP
Sbjct: 162 VADIYIVFAVTDPEKKKKGVTAFIVEKDFEGFFTGKKEKKLGIRSSPTTEIMFEDCVVPA 221
Query: 125 EDRL----PGFNSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPLAAF 180
RL GF T L R +A Q +GI+ G D +Y ERKQFG +A
Sbjct: 222 SKRLGEEGEGFKIAMKT---LDGGRNGIAAQAVGIAQGALDAALQYAKERKQFGKSIAEQ 278
Query: 181 QITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQAS-LGKAWVSARARETVALGREL 239
Q KLA M I+A L+ ++ + E+ + G+AS + K A + ++
Sbjct: 279 QGIAFKLADMATMIEASRLLTYQAAWL-ESSGLPYGKASAMSKLMAGDTAMKVTTEAVQI 337
Query: 240 LGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAR 277
GG G D+ V + D + EG+ +I L+ +R
Sbjct: 338 FGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISR 375
>sp|A8XNF0|ACAD1_CAEBR Probable medium-chain specific acyl-CoA dehydrogenase 1,
mitochondrial OS=Caenorhabditis briggsae GN=CBG15946
PE=3 SV=1
Length = 417
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 137/286 (47%), Gaps = 9/286 (3%)
Query: 4 IATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWI 63
+ +G+E QK+KYL +LA +AS+ +TEP GSD + + T K +I+ G K WI
Sbjct: 123 VYIAGNEEQKKKYLGALAAEPIIASYCVTEPGAGSDVNGVKTKCEKKGDEYIINGSKAWI 182
Query: 64 GNSTFADVLVVMARNTTTKK------INAFIVKKDAPGLTATKIENKIGLRMLQNGDILF 117
A V+AR+ + K AFIV D PG++ K E +G R I F
Sbjct: 183 TGGGHAKWFFVLARSDSDPKAPAGKAFTAFIVDGDTPGISRGKKEKNMGQRCSDTRTITF 242
Query: 118 KKVFVPDEDRL--PGFNSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGA 175
+ V VP E+ L PG F+ + R VA +G++ D +Y ++RK FG
Sbjct: 243 EDVRVPAENVLGAPG-AGFKVAMGAFDMTRPGVAAGALGLAWRCLDESAKYALQRKAFGT 301
Query: 176 PLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVAL 235
+A Q Q LA M N++ L+ ++ +N S AS+ K + + A +
Sbjct: 302 EIANHQAVQFMLADMAVNLELARLITYKSATDVDNKVRSSYNASIAKCFAADTANQAATN 361
Query: 236 GRELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITG 281
++ GGNG +++ V K D + + EG+ I ++ +R + G
Sbjct: 362 AVQIFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRIVISRMLLG 407
>sp|P70584|ACDSB_RAT Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Rattus norvegicus GN=Acadsb PE=1 SV=1
Length = 432
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 138/276 (50%), Gaps = 5/276 (1%)
Query: 8 GSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNST 67
G+E QK YLP L + S+ L+E GSD+ AL T A K +++ G K WI N+
Sbjct: 154 GTEEQKATYLPKLVT-EKLGSFCLSEAGAGSDSFALKTRADKSGNYYVINGSKMWISNAE 212
Query: 68 FADVLVVMAR---NTTTKKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPD 124
A++ +V A + + I F+V +D G + ENK+G+R + F+ V VP+
Sbjct: 213 HAELFLVFANVDPPSGYRGITCFLVDRDTEGFQIGRRENKMGIRASSTCQLTFENVKVPE 272
Query: 125 EDRLPGF-NSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPLAAFQIT 183
L + ++ L+ R+ +A Q +G++ G +D Y+ ER QFG + FQ
Sbjct: 273 TSVLGKIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERMQFGKRIFDFQGL 332
Query: 184 QQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGRELLGGN 243
Q ++A + ++A L+ + R+ E G+ + +AS+ K + S A T + E +GG
Sbjct: 333 QHQVAHVATQLEAARLLTYNAARLVEAGRPFIKEASMAKYYASEVAGLTTSKCIEWMGGV 392
Query: 244 GIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREI 279
G D+ V K F D + EG+ +I A+ I
Sbjct: 393 GYTKDYPVEKFFRDAKIGTIYEGTSNIQLNTIAKHI 428
>sp|A5A6I0|ACADM_PANTR Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pan
troglodytes GN=ACADM PE=2 SV=1
Length = 421
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 138/284 (48%), Gaps = 7/284 (2%)
Query: 2 LTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKR 61
+ I +G++ QK+KYL + + M ++ +TEP GSD + + T A K +I+ GQK
Sbjct: 131 MPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKM 190
Query: 62 WIGNSTFADVLVVMARNTTTKKINA------FIVKKDAPGLTATKIENKIGLRMLQNGDI 115
WI N A+ ++AR+ K A FIV+ D PG+ + E +G R I
Sbjct: 191 WITNGGKANWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQRCSDTRGI 250
Query: 116 LFKKVFVPDEDRLPGFNS-FQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFG 174
+F+ V VP E+ L G + F+ R +VA +G++ D +Y +ERK FG
Sbjct: 251 VFEDVKVPRENVLIGDGAGFKVAMGAFDKTRPVVAAGAVGLAQRALDEATKYALERKTFG 310
Query: 175 APLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVA 234
L Q LA+M ++ + R ++G+ + AS+ KA+ A +
Sbjct: 311 KLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNTYYASIAKAFAGDIANQLAT 370
Query: 235 LGRELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAARE 278
++LGGNG T++ V K D + + EG+ I LI ARE
Sbjct: 371 DAVQILGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIVARE 414
>sp|Q06319|ACDS_MEGEL Acyl-CoA dehydrogenase, short-chain specific OS=Megasphaera
elsdenii PE=1 SV=1
Length = 383
Score = 125 bits (314), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/273 (33%), Positives = 136/273 (49%), Gaps = 7/273 (2%)
Query: 8 GSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGG-WILEGQKRWIGNS 66
G+EAQK K+L L + T + ++ LTEPN G+DAS T ATK + G + L G K +I N
Sbjct: 105 GTEAQKEKFLVPLVEGTKLGAFGLTEPNAGTDASGQQTIATKNDDGTYTLNGSKIFITNG 164
Query: 67 TFADVLVVMARNTTTKK---INAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVP 123
AD+ +V A +K I AFI++ PG T K E+K+G+ Q +++F+ V VP
Sbjct: 165 GAADIYIVFAMTDKSKGNHGITAFILEDGTPGFTYGKKEDKMGIHTSQTMELVFQDVKVP 224
Query: 124 DEDRL-PGFNSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPLAAFQI 182
E+ L F+ + L R+ VA Q +GI+ Y +R QFG PL FQ
Sbjct: 225 AENMLGEEGKGFKIAMMTLDGGRIGVAAQALGIAEAALADAVEYSKQRVQFGKPLCKFQS 284
Query: 183 TQQKLAQMLGNIQAM-NLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGRELLG 241
KLA M I+A NLV C+ E GK A++ K S A ++ G
Sbjct: 285 ISFKLADMKMQIEAARNLVYKAACKKQE-GKPFTVDAAIAKRVASDVAMRVTTEAVQIFG 343
Query: 242 GNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLI 274
G G ++ V + D + EG+ ++ ++
Sbjct: 344 GYGYSEEYPVARHMRDAKITQIYEGTNEVQLMV 376
>sp|C3UVB0|ACD_DESML Glutaryl-CoA dehydrogenase OS=Desulfococcus multivorans GN=Acd PE=1
SV=1
Length = 389
Score = 125 bits (313), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 146/292 (50%), Gaps = 21/292 (7%)
Query: 3 TIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRW 62
TI T GSEA K+KY+P L+ + + +TEP+ GSD A+S+ A W+L G K W
Sbjct: 100 TILTYGSEALKKKYVPKLSSAEFLGGFGITEPDAGSDVMAMSSTAEDKGDHWLLNGSKTW 159
Query: 63 IGNSTFADVLVVMA---RNTTTKKINAFIVK-KDAPGLTATKIENKIGLRMLQNGDILFK 118
I N+ ADVL+ A + ++ ++AF+++ ++ PG+ + +E K+G G++
Sbjct: 160 ISNAAQADVLIYYAYTDKAAGSRGLSAFVIEPRNFPGIKTSNLE-KLGSHASPTGELFLD 218
Query: 119 KVFVPDEDRL--PG------FNSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMER 170
V VP E+ L PG F S T R+ A +G++ D +Y ER
Sbjct: 219 NVKVPKENILGKPGDGARIVFGSLNHT-------RLSAAAGGVGLAQACLDAAIKYCNER 271
Query: 171 KQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLG-QASLGKAWVSARA 229
+QFG P+ FQ+ Q +AQM ++A L+ ++ + G+++ G ++ K
Sbjct: 272 RQFGKPIGDFQMNQDMIAQMAVEVEAARLLAYKAAAAKDEGRLNNGLDVAMAKYAAGEAV 331
Query: 230 RETVALGRELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITG 281
+ +LG G T++ V + + D ++ EGS +I +I A + G
Sbjct: 332 SKCANYAMRILGAYGYSTEYPVARFYRDAPTYYMVEGSANICKMIIALDQLG 383
>sp|Q5EAD4|ACDSB_BOVIN Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Bos taurus GN=ACADSB PE=2 SV=1
Length = 432
Score = 124 bits (312), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 137/277 (49%), Gaps = 6/277 (2%)
Query: 4 IATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWI 63
I G+E QK YLP LA +S ++E GSD+ A+ T A K +I+ G K WI
Sbjct: 150 IGKYGTEEQKATYLPKLAT-EKASSICISETGAGSDSFAMKTRADKKGDYYIINGSKMWI 208
Query: 64 GNSTFADVLVVMAR---NTTTKKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKV 120
++ A + VVMA + K I F+V D GL K ENK+G+R + F+ V
Sbjct: 209 SSAEIAGLFVVMANADFSAGYKGITCFLVDGDTEGLHVGKPENKLGIRASSTCPVTFENV 268
Query: 121 FVPDEDRLPGF-NSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPLAA 179
VP + L + ++ L+ R+ +A Q +G++ G +D Y+ ERKQFG +
Sbjct: 269 KVPKTNILGQVGHGYKYAIGSLNEGRIGIAAQMLGVAQGCFDYTIPYIKERKQFGRRVFD 328
Query: 180 FQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGREL 239
FQ Q ++A M ++A L+ + R+ E G+ + +AS+ K S A + E
Sbjct: 329 FQGLQHQVAHMATQLEAARLLTYNAARLLEAGRPMIKEASMAKYHASELAGLITSKCIEW 388
Query: 240 LGGNGIVTDFLVGKAFCDFEPFHTGEGSYDIN-NLIA 275
+GG G + V K F D + EG+ +I N IA
Sbjct: 389 MGGVGYTKSYPVEKYFRDAKIGTIYEGTSNIQLNTIA 425
>sp|Q3ZBF6|ACADS_BOVIN Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos
taurus GN=ACADS PE=2 SV=1
Length = 412
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 134/274 (48%), Gaps = 6/274 (2%)
Query: 8 GSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNST 67
G++ QK++++ + +AL+EP +GSDA A +T A W+L G K WI N+
Sbjct: 131 GTKEQKQQWVAPFTSGDKIGCFALSEPGNGSDAGAAATTARADGDSWVLSGTKAWITNAW 190
Query: 68 FADVLVVMA---RNTTTKKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPD 124
A +VV A R+ K I+AF+V PGLT K E+K+G+R +++F+ +P
Sbjct: 191 EASAVVVFASTDRSLHNKGISAFLVPMPTPGLTLGKKEDKLGIRASSTANLIFEDRRIPK 250
Query: 125 EDRL--PGFNSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPLAAFQI 182
+ L PG F+ L R+ +A Q +GI+ D Y R FGAPL Q
Sbjct: 251 DSLLGEPGLG-FKIAMQTLDTGRIGIASQALGIAQAALDCAVTYAENRSAFGAPLTKLQA 309
Query: 183 TQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGRELLGG 242
Q KLA M +++ L+ WR + +N K +A++ K S A ++LGG
Sbjct: 310 IQFKLADMALALESARLLTWRAAMLKDNKKPFTKEAAMAKLAASEAATAITHQAMQILGG 369
Query: 243 NGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAA 276
G V + + + D EG+ +I L+ A
Sbjct: 370 MGYVKEMPAERHYRDARITEIYEGTSEIQRLVVA 403
>sp|P52042|ACDS_CLOAB Acyl-CoA dehydrogenase, short-chain specific OS=Clostridium
acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 /
LMG 5710 / VKM B-1787) GN=bcd PE=3 SV=1
Length = 379
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 139/283 (49%), Gaps = 10/283 (3%)
Query: 4 IATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWI 63
I G+E QK+KYL LA+ + ++ LTEPN G+D+ A T A +++ G K +I
Sbjct: 98 INEHGTEEQKQKYLVPLAKGEKIGAYGLTEPNAGTDSGAQQTVAVLEGDHYVINGSKIFI 157
Query: 64 GNSTFADVLVVMA---RNTTTKKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKV 120
N AD V+ A R TK I+AFI++K G + K+E K+G+R +++F+ +
Sbjct: 158 TNGGVADTFVIFAMTDRTKGTKGISAFIIEKGFKGFSIGKVEQKLGIRASSTTELVFEDM 217
Query: 121 FVPDEDRL----PGFNSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAP 176
VP E+ + GF T L R+ +A Q +GI+ G ++ Y+ ERKQFG
Sbjct: 218 IVPVENMIGKEGKGFPIAMKT---LDGGRIGIAAQALGIAEGAFNEARAYMKERKQFGRS 274
Query: 177 LAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALG 236
L FQ +A M I++ + ++ + + G A+ K + A +
Sbjct: 275 LDKFQGLAWMMADMDVAIESARYLVYKAAYLKQAGLPYTVDAARAKLHAANVAMDVTTKA 334
Query: 237 RELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREI 279
+L GG G D+ V + D + EG+ ++ L+ + +I
Sbjct: 335 VQLFGGYGYTKDYPVERMMRDAKITEIYEGTSEVQKLVISGKI 377
>sp|Q3SZB4|ACADM_BOVIN Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos
taurus GN=ACADM PE=2 SV=1
Length = 421
Score = 122 bits (305), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 138/287 (48%), Gaps = 7/287 (2%)
Query: 2 LTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKR 61
+ + +G++ Q++KYL + + M ++ +TEP GSD + + T A K +I+ GQK
Sbjct: 131 MPVIIAGNDQQQKKYLGRMTEEPLMCAYCVTEPVAGSDVAGIKTKAEKKGDEYIINGQKM 190
Query: 62 WIGNSTFADVLVVMARNT------TTKKINAFIVKKDAPGLTATKIENKIGLRMLQNGDI 115
WI N A+ ++AR+ +K FIV+ D PG+ + E +G R I
Sbjct: 191 WITNGGKANWYFLLARSDPDPKAPASKAFTGFIVEADTPGVQIGRKELNMGQRCSDTRGI 250
Query: 116 LFKKVFVPDEDRLPGFNS-FQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFG 174
+F+ V VP E+ L G + F+ R VA +G++ D +Y +ERK FG
Sbjct: 251 VFEDVRVPKENVLIGEGAGFKIAMGAFDKTRPPVAAAAVGLAQRALDEATKYALERKTFG 310
Query: 175 APLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVA 234
L Q LA+M ++ L R ++G+ + AS+ KA+ A + +
Sbjct: 311 KLLIEHQGISFLLAEMAMKVELARLSYQRAAWEVDSGRRNTYYASIAKAYAGDIANQLAS 370
Query: 235 LGRELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITG 281
++ GGNG T++ V K D + + EG+ I LI ARE G
Sbjct: 371 DAVQIFGGNGFNTEYPVEKLMRDAKIYQIYEGTAQIQRLIIAREHIG 417
>sp|P45952|ACADM_MOUSE Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus
musculus GN=Acadm PE=1 SV=1
Length = 421
Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 137/284 (48%), Gaps = 7/284 (2%)
Query: 2 LTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKR 61
+ + +G++ QK+KYL + + M ++ +TEP+ GSD +A+ T A K +++ GQK
Sbjct: 131 MPVILAGNDQQKKKYLGRMTEQPMMCAYCVTEPSAGSDVAAIKTKAEKKGDEYVINGQKM 190
Query: 62 WIGNSTFADVLVVMARNTTTKKINA------FIVKKDAPGLTATKIENKIGLRMLQNGDI 115
WI N A+ ++AR+ K+ A FIV+ D PG+ K E +G R I
Sbjct: 191 WITNGGKANWYFLLARSNPDPKVPASKAFTGFIVEADTPGIHIGKKELNMGQRCSDTRGI 250
Query: 116 LFKKVFVPDEDRLPGFNS-FQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFG 174
F+ V VP E+ L G + F+ R VA +G++ D +Y ++RK FG
Sbjct: 251 AFEDVRVPKENVLIGEGAGFKIAMGAFDRTRPTVAAGAVGLAQRALDEATKYALDRKTFG 310
Query: 175 APLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVA 234
L Q LA+M ++ L R ++G+ + AS+ KA+ A +
Sbjct: 311 KLLVEHQGVSFLLAEMAMKVELARLSYQRAAWEVDSGRRNTYYASIAKAFAGDIANQLAT 370
Query: 235 LGRELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAARE 278
++ GG G T++ V K D + + EG+ I LI ARE
Sbjct: 371 DAVQIFGGYGFNTEYPVEKLMRDAKIYQIYEGTAQIQRLIIARE 414
>sp|P41367|ACADM_PIG Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus
scrofa GN=ACADM PE=1 SV=3
Length = 421
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 134/281 (47%), Gaps = 7/281 (2%)
Query: 8 GSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNST 67
G+ Q++KYL + + M ++ +TEP GSD + + T A K +I+ GQK WI N
Sbjct: 137 GNYQQQKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGG 196
Query: 68 FADVLVVMARN------TTTKKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVF 121
A+ ++AR+ +K FIV+ D PG+ + E +G R I+F+ V
Sbjct: 197 KANWYFLLARSDPDPKAPASKAFTGFIVEADTPGVQIGRKEINMGQRCSDTRGIVFEDVR 256
Query: 122 VPDEDRLPGFNS-FQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPLAAF 180
VP E+ L G + F+ R VA +G++ D +Y +ERK FG LA
Sbjct: 257 VPKENVLTGEGAGFKIAMGTFDKTRPPVAAGAVGLAQRALDEATKYALERKTFGKLLAEH 316
Query: 181 QITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGRELL 240
Q LA M ++ L R ++G+ + AS+ KA+ + A + ++
Sbjct: 317 QGISFLLADMAMKVELARLSYQRAAWEIDSGRRNTYYASIAKAYAADIANQLATDAVQVF 376
Query: 241 GGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITG 281
GGNG T++ V K D + + EG+ I +I ARE G
Sbjct: 377 GGNGFNTEYPVEKLMRDAKIYQIYEGTAQIQRIIIAREHIG 417
>sp|P79273|ACADS_PIG Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus
scrofa GN=ACADS PE=2 SV=1
Length = 413
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 135/275 (49%), Gaps = 7/275 (2%)
Query: 8 GSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNST 67
GS+ QK++++ + +AL+EP +GSDA A +T A W+L G K WI N+
Sbjct: 131 GSKEQKQQWITPFTSGDKVGCFALSEPGNGSDAGAAATTAQADHDSWVLSGTKAWITNAW 190
Query: 68 FADVLVVMA---RNTTTKKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPD 124
A VV A R+ K I+AF+V GLT K E+K+G+R +++F+ +P
Sbjct: 191 EASAAVVFASTDRSLQNKGISAFLVPMPTAGLTLGKKEDKLGIRASSTANLIFEDCRIPK 250
Query: 125 EDRL--PGFNSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPLAAFQI 182
E+ L PG F+ L + R+ +A + +GIS D Y R+ FG PL Q
Sbjct: 251 ENLLGEPGMG-FKIAMKTLDMGRIGIASKALGISQAALDCAVNYAENRRAFGVPLTKLQG 309
Query: 183 TQQKLAQMLGNIQAMNLVGWRLCRMCENGKMS-LGQASLGKAWVSARARETVALGRELLG 241
Q KLA M +++ L+ WR + +N K + + ++ K S A ++LG
Sbjct: 310 IQFKLADMALALESARLLTWRAAMLKDNKKNPFIKEPAMAKLAASEAATAITHQAIQILG 369
Query: 242 GNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAA 276
G G VT+ + + D EG+ +I L+ A
Sbjct: 370 GMGYVTEMPAERHYRDARITEIYEGTSEIQRLVIA 404
>sp|P08503|ACADM_RAT Medium-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Rattus norvegicus GN=Acadm PE=1 SV=1
Length = 421
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 135/284 (47%), Gaps = 7/284 (2%)
Query: 2 LTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKR 61
+ + +G++ QK+KYL + + M ++ +TEP+ GSD + + T A K +++ GQK
Sbjct: 131 MPVIIAGNDQQKKKYLGRMTEQPMMCAYCVTEPSAGSDVAGIKTKAEKKGDEYVINGQKM 190
Query: 62 WIGNSTFADVLVVMARNTTTKKINA------FIVKKDAPGLTATKIENKIGLRMLQNGDI 115
WI N A+ V+ R+ K+ A FIV+ D PG+ K E +G R I
Sbjct: 191 WITNGGKANWYFVLTRSNPDPKVPASKAFTGFIVEADTPGIHIGKKELNMGQRCSDTRGI 250
Query: 116 LFKKVFVPDEDRLPGFNS-FQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFG 174
F+ V VP E+ L G + F+ R VA +G++ D +Y ++RK FG
Sbjct: 251 TFEDVRVPKENVLIGEGAGFKIAMGAFDRTRPTVAAGAVGLAQRALDEATKYALDRKTFG 310
Query: 175 APLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVA 234
L Q LA+M ++ L R ++G+ + AS+ KA+ A +
Sbjct: 311 KLLVEHQGVSFLLAEMAMKVELARLSYQRAAWEVDSGRRNTYFASIAKAFAGDIANQLAT 370
Query: 235 LGRELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAARE 278
++ GG G T++ V K D + + EG+ I LI ARE
Sbjct: 371 DAVQIFGGYGFNTEYPVEKLMRDAKIYQIYEGTAQIQRLIIARE 414
>sp|Q8HXY8|ACADM_MACFA Medium-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Macaca fascicularis GN=ACADM PE=2 SV=1
Length = 421
Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 135/287 (47%), Gaps = 7/287 (2%)
Query: 2 LTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKR 61
+ I +G+E QK+KYL + + M ++ +TEP GSD + + T A K +I+ GQK
Sbjct: 131 MPIIIAGNEQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKM 190
Query: 62 WIGNSTFADVLVVMARNTTTKKINA------FIVKKDAPGLTATKIENKIGLRMLQNGDI 115
WI N A ++AR+ K A FIV+ D PG+ + E +G R I
Sbjct: 191 WITNGGKASWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQRCSDTRGI 250
Query: 116 LFKKVFVPDEDRLPGFNS-FQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFG 174
+F+ V V E+ L G + F+ R V+ +G++ D +Y +ERK FG
Sbjct: 251 VFEDVKVLKENVLIGDGAGFKIAMGAFDKTRPTVSSGAVGLAQRALDEATKYALERKTFG 310
Query: 175 APLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVA 234
L Q LA+M ++ + R ++G+ + AS+ KA+ A +
Sbjct: 311 KLLIEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNTYYASIAKAFAGDIANQLAT 370
Query: 235 LGRELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITG 281
++ GGNG T++ V K D + + EG+ I LI ARE G
Sbjct: 371 DAVQIFGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIIAREHIG 417
>sp|A8WP91|ACAD2_CAEBR Probable medium-chain specific acyl-CoA dehydrogenase 2,
mitochondrial OS=Caenorhabditis briggsae GN=CBG00953
PE=3 SV=2
Length = 408
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 135/293 (46%), Gaps = 11/293 (3%)
Query: 4 IATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWI 63
+ +G+E QK+KYL +LA +AS+ +TEP GSD + + T K +I+ G K WI
Sbjct: 118 VYIAGNEEQKKKYLGALAAEPIIASYCVTEPGAGSDVNGVKTKCEKKGNEYIINGSKAWI 177
Query: 64 GNSTFADVLVVMARNTTTKK------INAFIVKKDAPGLTATKIENKIGLRMLQNGDILF 117
A V+AR+ K AFIV D G+T K E +G R I F
Sbjct: 178 TGGGHAKWFFVLARSDPNPKTPAGKAFTAFIVDGDTSGITRGKKEKNMGQRCSDTRTITF 237
Query: 118 KKVFVPDEDRL-PGFNSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAP 176
+ V VP+E+ L P F+ + R VA +G+S D +Y ++RK FG
Sbjct: 238 EDVRVPEENVLGPPGAGFKVAMSAFDMTRPGVAAGALGLSWRCLDESAKYALQRKAFGTE 297
Query: 177 LAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALG 236
+A Q Q L+ M N++ L+ ++ +NG S AS + R R + L
Sbjct: 298 IANHQAVQFMLSDMAINLELARLITYKSATDVDNGVRSSYNASKSASQRIPRIRRLLMLF 357
Query: 237 RELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITGFASFKPTS 289
R NG +++ V K D + + EG+ I ++ +R + G + TS
Sbjct: 358 R----CNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRIVISRMLLGHVAQNGTS 406
>sp|Q8HXY7|ACADV_MACFA Very long-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Macaca fascicularis GN=ACADVL PE=2 SV=1
Length = 655
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 141/297 (47%), Gaps = 20/297 (6%)
Query: 8 GSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGG--WILEGQKRWIGN 65
G++AQK KYLP LA T+A++ LTEP+ GSDA+++ T+A G + L G K WI N
Sbjct: 193 GTKAQKEKYLPKLASGETLAAFCLTEPSSGSDAASIRTSAVPSPCGKYYTLNGSKLWISN 252
Query: 66 STFADVLVVMARNTTT--------KKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILF 117
AD+ V A+ T +KI AF+V++ G+T E K+G++ ++LF
Sbjct: 253 GGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGVTHGPPEKKMGIKASNTAEVLF 312
Query: 118 KKVFVPDEDRLPGFNS-FQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAP 176
V VP E+ L S F+ L+ R +A G G+ Y R QFG
Sbjct: 313 DGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMRGIITKAVDYATNRIQFGEK 372
Query: 177 LAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLG-QASLGKAWVSARARETVAL 235
+ F + Q+KLA+M+ + + + + G +A++ K + S A +
Sbjct: 373 IHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGSTDFQIEAAISKIFGSEAAWKVTDE 432
Query: 236 GRELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAA--------REITGFAS 284
+++GG G + + V + D F EG+ DI L A +E++G S
Sbjct: 433 CIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVALQGCMDKGKELSGLGS 489
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.133 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,857,902
Number of Sequences: 539616
Number of extensions: 4081111
Number of successful extensions: 8899
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 8455
Number of HSP's gapped (non-prelim): 180
length of query: 296
length of database: 191,569,459
effective HSP length: 117
effective length of query: 179
effective length of database: 128,434,387
effective search space: 22989755273
effective search space used: 22989755273
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)