Query 022503
Match_columns 296
No_of_seqs 127 out of 1254
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 06:33:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022503.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022503hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ix5_A Acyl-coenzyme A oxidase 100.0 9.3E-60 3.2E-64 431.3 33.4 288 2-289 145-432 (436)
2 3swo_A Glutaryl-COA dehydrogen 100.0 3.9E-59 1.3E-63 423.6 32.9 284 2-287 116-399 (399)
3 3sf6_A Glutaryl-COA dehydrogen 100.0 3.8E-59 1.3E-63 424.0 31.7 282 2-285 121-402 (403)
4 3ii9_A Glutaryl-COA dehydrogen 100.0 4E-59 1.4E-63 423.1 28.8 284 2-285 110-395 (396)
5 1r2j_A Protein FKBI; polyketid 100.0 1.1E-58 3.7E-63 416.1 29.1 279 3-284 85-366 (366)
6 3p4t_A Putative acyl-COA dehyd 100.0 4.6E-58 1.6E-62 417.0 32.7 282 2-284 118-403 (403)
7 2eba_A Putative glutaryl-COA d 100.0 7.4E-58 2.5E-62 413.4 33.5 281 3-284 103-384 (385)
8 2dvl_A Acyl-COA dehydrogenase; 100.0 5.4E-58 1.8E-62 412.5 31.7 278 2-281 94-372 (372)
9 2d29_A Acyl-COA dehydrogenase; 100.0 7.7E-58 2.6E-62 413.5 32.7 281 2-282 98-386 (387)
10 1ukw_A Acyl-COA dehydrogenase; 100.0 5.7E-58 2E-62 413.3 31.0 280 2-281 95-378 (379)
11 3pfd_A Acyl-COA dehydrogenase; 100.0 4E-58 1.4E-62 416.2 29.2 280 2-281 109-393 (393)
12 3r7k_A Probable acyl COA dehyd 100.0 1.3E-57 4.3E-62 414.0 32.1 278 2-279 121-401 (403)
13 1egd_A Medium chain acyl-COA d 100.0 1.6E-57 5.6E-62 412.5 32.4 281 3-283 107-394 (396)
14 1buc_A Butyryl-COA dehydrogena 100.0 2.2E-57 7.4E-62 410.1 31.8 280 2-281 99-383 (383)
15 1siq_A GCD, glutaryl-COA dehyd 100.0 2.4E-57 8.3E-62 410.9 32.2 284 3-287 105-390 (392)
16 3nf4_A Acyl-COA dehydrogenase; 100.0 1.7E-57 5.8E-62 411.3 30.9 280 2-281 106-387 (387)
17 4hr3_A Putative acyl-COA dehyd 100.0 1.3E-57 4.6E-62 415.6 30.0 281 2-282 119-411 (415)
18 2vig_A Short-chain specific ac 100.0 3.4E-57 1.2E-61 409.8 31.2 282 2-283 97-382 (391)
19 2pg0_A Acyl-COA dehydrogenase; 100.0 6.2E-57 2.1E-61 407.4 32.5 278 2-279 100-383 (385)
20 1ivh_A Isovaleryl-COA dehydrog 100.0 2.2E-57 7.7E-62 411.4 29.3 281 2-282 106-392 (394)
21 2jif_A Short/branched chain sp 100.0 5E-57 1.7E-61 410.0 31.1 278 3-281 121-402 (404)
22 3mpi_A Glutaryl-COA dehydrogen 100.0 4.6E-57 1.6E-61 409.8 28.4 284 3-288 100-390 (397)
23 1rx0_A Acyl-COA dehydrogenase 100.0 1.6E-56 5.3E-61 405.6 30.8 280 2-281 109-392 (393)
24 3owa_A Acyl-COA dehydrogenase; 100.0 1.4E-56 4.9E-61 423.1 29.8 279 3-282 125-425 (597)
25 2wbi_A Acyl-COA dehydrogenase 100.0 2.4E-56 8.1E-61 408.6 29.0 280 3-282 126-419 (428)
26 2z1q_A Acyl-COA dehydrogenase; 100.0 4.2E-56 1.4E-60 419.8 28.6 281 2-283 119-416 (577)
27 2uxw_A VERY-long-chain specifi 100.0 3.6E-54 1.2E-58 407.7 28.4 275 2-276 139-425 (607)
28 3mkh_A Nitroalkane oxidase; ox 100.0 2.1E-53 7.2E-58 390.4 27.3 280 3-283 105-418 (438)
29 2c12_A Nitroalkane oxidase; ox 100.0 5.2E-53 1.8E-57 387.8 29.9 284 3-287 103-424 (439)
30 3djl_A Protein AIDB; alpha hel 100.0 3.4E-51 1.2E-55 382.0 25.9 275 2-283 143-443 (541)
31 2ddh_A Acyl-COA oxidase; beta 100.0 5.8E-51 2E-55 388.9 27.5 281 2-282 109-438 (661)
32 1w07_A Acyl-COA oxidase; oxido 100.0 1.2E-50 4.1E-55 387.2 27.5 283 2-284 108-443 (659)
33 2rfq_A 3-HSA hydroxylase, oxyg 100.0 3.9E-50 1.3E-54 364.0 27.1 270 2-286 94-391 (394)
34 3mxl_A Nitrososynthase; flavin 100.0 2.3E-50 7.9E-55 365.6 23.4 268 6-283 106-395 (395)
35 2jbr_A P-hydroxyphenylacetate 100.0 7.9E-50 2.7E-54 364.9 23.7 271 2-287 122-420 (422)
36 2or0_A Hydroxylase; APC7385, r 100.0 9.8E-50 3.4E-54 363.5 23.5 270 2-286 107-406 (414)
37 3m9v_A FAD-dependent oxidoredu 100.0 6.1E-49 2.1E-53 360.9 26.4 273 5-287 116-410 (439)
38 2yyk_A 4-hydroxyphenylacetate- 100.0 2.6E-41 8.8E-46 311.5 25.2 261 9-279 122-422 (481)
39 1u8v_A Gamma-aminobutyrate met 100.0 4.9E-41 1.7E-45 310.1 25.6 270 4-281 120-445 (490)
40 3hwc_A Chlorophenol-4-monooxyg 100.0 5.3E-36 1.8E-40 276.1 27.3 235 7-248 127-392 (515)
41 4g5e_A 2,4,6-trichlorophenol 4 100.0 1E-29 3.6E-34 234.5 26.8 232 11-247 134-392 (517)
42 3owa_A Acyl-COA dehydrogenase; 95.3 0.15 5.1E-06 47.9 11.7 110 173-284 482-594 (597)
43 2uxw_A VERY-long-chain specifi 90.4 8.5 0.00029 36.0 15.1 98 173-290 506-604 (607)
44 2z1q_A Acyl-COA dehydrogenase; 81.9 32 0.0011 31.8 14.2 104 173-286 468-574 (577)
45 1l6x_B Minimized B-domain of p 21.0 59 0.002 17.4 1.8 14 9-22 19-32 (34)
No 1
>2ix5_A Acyl-coenzyme A oxidase 4, peroxisomal; FAD, ACX4, flavin, peroxisome, glyoxysome, fatty acid metabo lipid metabolism, acyl-COA oxidase; HET: CAA FAD; 2.7A {Arabidopsis thaliana} PDB: 2ix6_A*
Probab=100.00 E-value=9.3e-60 Score=431.27 Aligned_cols=288 Identities=75% Similarity=1.209 Sum_probs=274.6
Q ss_pred hhhhhcCCHHHHHHHhHhhhccccceeEEecCCCCCCCcCCCeeEEEEECCEEEEEeEEEeecCCCCCCEEEEEEEeCCC
Q 022503 2 LTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNSTFADVLVVMARNTTT 81 (296)
Q Consensus 2 ~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~gs~~~~~~~~a~~~~~g~~l~G~K~~vt~~~~a~~~lv~a~~~~~ 81 (296)
.+|..+|+++||++|||++++|+.++++++|||+.|||...+.|+|++++|||+|||.|.|+||+..||+++|+++++++
T Consensus 145 ~~l~~~gt~~qk~~~l~~l~~G~~~~a~a~tEp~~GSd~~~~~t~A~~~gdg~vLnG~K~~is~a~~Ad~~lv~Ar~~~~ 224 (436)
T 2ix5_A 145 LTIALCGSEAQKEKYLPSLAQLNTVACWALTEPDNGSDASGLGTTATKVEGGWKINGQKRWIGNSTFADLLIIFARNTTT 224 (436)
T ss_dssp HHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEEETTT
T ss_pred HHHHHhCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCCcccceEEEEEeCCEEEEeeeccCCCCCcccCEEEEEEEECCC
Confidence 35778999999999999999999999999999999999999999999999999999999999999999999999998755
Q ss_pred CCeEEEEEeCCCCCeEEeecccccccccccccceEeeeeeeCCCCCCCCCCChHHhhhhhhHHHHHHHHHHHHHHHHHHH
Q 022503 82 KKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPDEDRLPGFNSFQDTNIPLSVARVMVAWQTIGISIGVYD 161 (296)
Q Consensus 82 ~~~~~flv~~~~~Gv~~~~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~~~~~~~~~~~~~~~~r~~~aa~~~G~~~~~l~ 161 (296)
+++++|+||.+.|||++.+.|+++|++++++++++|+||+||++++++..+++......+...|+.+++.++|+++++++
T Consensus 225 ~~~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~ 304 (436)
T 2ix5_A 225 NQINGFIVKKDAPGLKATKIPNKIGLRMVQNGDILLQNVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGIYD 304 (436)
T ss_dssp SSEEEEEEETTCTTEEEEECCCBSSSTTSCEEEEEEEEEEEEGGGBCTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEECCCCCeEeeccccccCCCcCCceeEEeccEEECHHHcCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999887788888888999999999999999999999
Q ss_pred HHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 022503 162 MCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGRELLG 241 (296)
Q Consensus 162 ~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~K~~a~~~a~~~~~~~~~~~G 241 (296)
.+++|+++|++||+|++++|.+|++|++|.++++++|++++++++.+|.+.+....++++|+++++.+.++++.++|+||
T Consensus 305 ~a~~ya~~R~qfG~pi~~~q~vq~~la~~~~~~~aar~l~~~aa~~~d~g~~~~~~as~aK~~a~e~a~~v~~~a~q~~G 384 (436)
T 2ix5_A 305 MCHRYLKERKQFGAPLAAFQLNQQKLVQMLGNVQAMFLMGWRLCKLYETGQMTPGQASLGKAWISSKARETASLGRELLG 384 (436)
T ss_dssp HHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTG
T ss_pred HHHHHHHhCeeCCcchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999987766778999999999999999999999999
Q ss_pred CCCCcCcChHHHHhhhcCCcccccchHHHHHHHHHHHHhcCcCCCCCC
Q 022503 242 GNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITGFASFKPTS 289 (296)
Q Consensus 242 ~~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~ 289 (296)
|.||+++++++|+|||++...+++|++++++..+++.++|+|++.|..
T Consensus 385 g~G~~~e~~l~r~~Rda~~~~i~~Gt~ei~~~~iar~llgl~~~~~~~ 432 (436)
T 2ix5_A 385 GNGILADFLVAKAFCDLEPIYTYEGTYDINTLVTGREVTGIASFKPAT 432 (436)
T ss_dssp GGGGBGGGSHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHSCCCCSCC-
T ss_pred ccccccCChHHHHHHHhhcceeecCHHHHHHHHHHHHHhCCccccchh
Confidence 999999999999999999999999999999999999999999887443
No 2
>3swo_A Glutaryl-COA dehydrogenase; ssgcid, glutaryl-COA dehdrogenase, mycobacerium smegmatis, S genomics; HET: FDA; 1.45A {Mycobacterium smegmatis}
Probab=100.00 E-value=3.9e-59 Score=423.60 Aligned_cols=284 Identities=31% Similarity=0.478 Sum_probs=273.5
Q ss_pred hhhhhcCCHHHHHHHhHhhhccccceeEEecCCCCCCCcCCCeeEEEEECCEEEEEeEEEeecCCCCCCEEEEEEEeCCC
Q 022503 2 LTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNSTFADVLVVMARNTTT 81 (296)
Q Consensus 2 ~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~gs~~~~~~~~a~~~~~g~~l~G~K~~vt~~~~a~~~lv~a~~~~~ 81 (296)
.+|..+|+++||++|||++.+|+.++++++|||++|||...+.|+|++++|||+|||.|.|+|++..||+++|+++++
T Consensus 116 ~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v~a~~~-- 193 (399)
T 3swo_A 116 FSIYRYGSEEQKNEWLPRLAAGDAIGCFGLTEPDFGSNPAGMRTRARRDGSDWILNGTKMWITNGNLADVATVWAQTD-- 193 (399)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEBCT--
T ss_pred hHHHhcCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCCCccceEEEEEeCCEEEEEEEEEeECCCCccCEEEEEEEeC--
Confidence 357889999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCeEEEEEeCCCCCeEEeecccccccccccccceEeeeeeeCCCCCCCCCCChHHhhhhhhHHHHHHHHHHHHHHHHHHH
Q 022503 82 KKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPDEDRLPGFNSFQDTNIPLSVARVMVAWQTIGISIGVYD 161 (296)
Q Consensus 82 ~~~~~flv~~~~~Gv~~~~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~~~~~~~~~~~~~~~~r~~~aa~~~G~~~~~l~ 161 (296)
+++++|+||++.|||++.+.|+++|+++++++++.|+||+||+++++|.+.++......+...|+.+++.++|+++++++
T Consensus 194 ~g~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~fd~v~Vp~~~~lg~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~ 273 (399)
T 3swo_A 194 DGIRGFLVPTDTPGFTANEIHRKLSLRASVTSELVLDNVRLPASAQLPLAEGLSAPLSCLNEARFGIVFGALGAARDSLE 273 (399)
T ss_dssp TSCEEEEEETTSTTEEEEECCCBSSCCSSCEEEEEEEEEEECGGGBCTTCCSTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEeCCCCCeEeecCcCcccCCCCceeEEEEccEEEcHHHcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999886778888889999999999999999999999
Q ss_pred HHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 022503 162 MCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGRELLG 241 (296)
Q Consensus 162 ~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~K~~a~~~a~~~~~~~~~~~G 241 (296)
.+++|+++|++||+|++++|.+|++|+++.++++++|++++++++.+|.+.+....++++|+++++.+.++++.++|+||
T Consensus 274 ~a~~~a~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~aK~~a~~~a~~v~~~a~q~~G 353 (399)
T 3swo_A 274 TTIAYTQSREVFDKPLSNYQLTQEKLANMTVELGKGMLLAIHLGRIKDAEGVRPEQISLGKLNNVREAIAIARECRTLLG 353 (399)
T ss_dssp HHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHhcCeeCCcchhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999998778888999999999999999999999999
Q ss_pred CCCCcCcChHHHHhhhcCCcccccchHHHHHHHHHHHHhcCcCCCC
Q 022503 242 GNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITGFASFKP 287 (296)
Q Consensus 242 ~~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~ 287 (296)
|.||+++++++|+|||++...+++|++++++..+++.++|+|++.+
T Consensus 354 g~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~llg~p~~~~ 399 (399)
T 3swo_A 354 GSGITLEYSPLRHANNLESVLTYEGTSEMHLLSIGKALTGKAAFRS 399 (399)
T ss_dssp GGGGBSSSTHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHSCCCCC-
T ss_pred cccccCCCcHHHHHHHhhcceeecCHHHHHHHHHHHHHcCcccccC
Confidence 9999999999999999999999999999999999999999998754
No 3
>3sf6_A Glutaryl-COA dehydrogenase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: FDA; 1.70A {Mycobacterium smegmatis}
Probab=100.00 E-value=3.8e-59 Score=424.03 Aligned_cols=282 Identities=35% Similarity=0.549 Sum_probs=272.9
Q ss_pred hhhhhcCCHHHHHHHhHhhhccccceeEEecCCCCCCCcCCCeeEEEEECCEEEEEeEEEeecCCCCCCEEEEEEEeCCC
Q 022503 2 LTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNSTFADVLVVMARNTTT 81 (296)
Q Consensus 2 ~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~gs~~~~~~~~a~~~~~g~~l~G~K~~vt~~~~a~~~lv~a~~~~~ 81 (296)
.+|..+|+++||++|||++.+|+.++++++|||++|||...+.|+|++++|||+|||.|.|+|++..||+++|+++++
T Consensus 121 ~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~ar~~-- 198 (403)
T 3sf6_A 121 YAIHAFGSDEQKDQWLPDMASGHRIGCFGLTEPDHGSDPAGMRTRATRSGDDWILTGTKMWITNGSVADVAVVWARTD-- 198 (403)
T ss_dssp HHHHHHCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETGGGCSEEEEEEEET--
T ss_pred HHHHHhCCHHHHHHHHHHHhCCCceEEEEEccCCCCCCchhcEEEEEEECCEEEEEEEEEeecCCcccCEEEEEEEeC--
Confidence 457889999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCeEEEEEeCCCCCeEEeecccccccccccccceEeeeeeeCCCCCCCCCCChHHhhhhhhHHHHHHHHHHHHHHHHHHH
Q 022503 82 KKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPDEDRLPGFNSFQDTNIPLSVARVMVAWQTIGISIGVYD 161 (296)
Q Consensus 82 ~~~~~flv~~~~~Gv~~~~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~~~~~~~~~~~~~~~~r~~~aa~~~G~~~~~l~ 161 (296)
+++++|+||++.|||++.+.|+++|++++++++++|+||+||+++++|.+.++......+...|+.+++.++|+++++++
T Consensus 199 ~g~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~fd~v~Vp~~~~lg~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~ 278 (403)
T 3sf6_A 199 EGIRGFVVPTDTPGFTANTIKSKMSLRASVTSELVLDGVRLPDSARLPGATSLGAPLRCLNEARFGIVFGALGAARDCLE 278 (403)
T ss_dssp TEEEEEEEETTSTTEEEEECCSCSSCTTSCEEEEEEEEEEEEGGGBCTTCCSTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEECCCCCeEecCCCCccCCCCCceeEEEEccEEEcHHHccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999887778888889999999999999999999999
Q ss_pred HHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 022503 162 MCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGRELLG 241 (296)
Q Consensus 162 ~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~K~~a~~~a~~~~~~~~~~~G 241 (296)
.+++|+++|++||+|++++|.+|++|+++.++++++|++++++++.+|.+.+....++++|+++++.+.++++.++|+||
T Consensus 279 ~a~~ya~~R~~fg~pi~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~aK~~a~~~a~~v~~~a~q~~G 358 (403)
T 3sf6_A 279 TALAYACSREQFDRPIGGFQLTQQKLADMTLEYGKGFLLALHLGRQKDAGELAPEQVSLGKLNNVREAIEIARTARTVLG 358 (403)
T ss_dssp HHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHhhCcccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999988888888999999999999999999999999
Q ss_pred CCCCcCcChHHHHhhhcCCcccccchHHHHHHHHHHHHhcCcCC
Q 022503 242 GNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITGFASF 285 (296)
Q Consensus 242 ~~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~~~~~~l~~~~~ 285 (296)
|.||+++++++|+|||++...+++|++++++..+++.++|+|++
T Consensus 359 g~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~llgl~~~ 402 (403)
T 3sf6_A 359 ASGITGEYPVMRHANNLESVLTYEGTSEMHTLIIGQALTGVGAF 402 (403)
T ss_dssp GGGGSTTSSHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHSCCCC
T ss_pred CeEccccCcHHHHHhhcccceeecCHHHHHHHHHHHHHhCcccc
Confidence 99999999999999999999999999999999999999999986
No 4
>3ii9_A Glutaryl-COA dehydrogenase; slipchip, microfluidics, screening, optimization, protein crystallization, structural genomics; HET: PGE PG4; 1.74A {Burkholderia pseudomallei 1710B} PDB: 3eon_A* 3eom_A* 3gqt_A* 3gnc_A* 3d6b_A
Probab=100.00 E-value=4e-59 Score=423.10 Aligned_cols=284 Identities=40% Similarity=0.621 Sum_probs=266.9
Q ss_pred hhhhhcCCHHHHHHHhHhhhccccceeEEecCCCCCCCcCCCeeEEEEECCEEEEEeEEEeecCCCCCCEEEEEEEeCCC
Q 022503 2 LTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNSTFADVLVVMARNTTT 81 (296)
Q Consensus 2 ~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~gs~~~~~~~~a~~~~~g~~l~G~K~~vt~~~~a~~~lv~a~~~~~ 81 (296)
.+|..+|+++||++|||.+++|+.++++++|||++|||...+.|+|++++|||+|||+|.|+|++..||+++|+++++++
T Consensus 110 ~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v~a~~~~~ 189 (396)
T 3ii9_A 110 VPIFEFGSDAQKEKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRARKVPGGYSLSGSKMWITNSPIADVFVVWAKLDED 189 (396)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHTSSCEEEECCCCC------CCCCEEEEETTEEEEEEEEEEEETGGGCSEEEEEEEEEET
T ss_pred HHHHHhCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCChhhCeeEEEEeCCEEEEEEEEEeECCCccCCEEEEEEEecCC
Confidence 45889999999999999999999999999999999999999999999999999999999999999999999999998522
Q ss_pred --CCeEEEEEeCCCCCeEEeecccccccccccccceEeeeeeeCCCCCCCCCCChHHhhhhhhHHHHHHHHHHHHHHHHH
Q 022503 82 --KKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPDEDRLPGFNSFQDTNIPLSVARVMVAWQTIGISIGV 159 (296)
Q Consensus 82 --~~~~~flv~~~~~Gv~~~~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~~~~~~~~~~~~~~~~r~~~aa~~~G~~~~~ 159 (296)
+++++|+||++.|||++.+.|+++|++++++++++||||+||++++++...++......+...|+.+++.++|+++++
T Consensus 190 g~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~l~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~a 269 (396)
T 3ii9_A 190 GRDEIRGFILEKGCKGLSAPAIHGKVGLRASITGEIVLDEAFVPEENILPHVKGLRGPFTCLNSARYGIAWGALGAAESC 269 (396)
T ss_dssp TEEEEEEEEEETTCTTEECCBCCCCSSCTTSCEEEEEEEEEEEEGGGBCTTCCSTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEecCCCCeEeccccccccCCcCCeeEEEEccEEECHHHccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 358999999999999999999999999999999999999999999998777888888889999999999999999999
Q ss_pred HHHHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 022503 160 YDMCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGREL 239 (296)
Q Consensus 160 l~~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~K~~a~~~a~~~~~~~~~~ 239 (296)
++.+++|+++|++||+|++++|.+|++|+++.++++++|++++++++.+|.+.+....++++|+++++.+.++++.++|+
T Consensus 270 l~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~aK~~a~~~a~~~~~~a~q~ 349 (396)
T 3ii9_A 270 WHIARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDM 349 (396)
T ss_dssp HHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCeeCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999887788889999999999999999999999
Q ss_pred hCCCCCcCcChHHHHhhhcCCcccccchHHHHHHHHHHHHhcCcCC
Q 022503 240 LGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITGFASF 285 (296)
Q Consensus 240 ~G~~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~~~~~~l~~~~~ 285 (296)
|||.||+++++++|+|||++...+++|++++++..+++.++|+|++
T Consensus 350 ~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~~~~~~ia~~llglp~~ 395 (396)
T 3ii9_A 350 LGGNGISDEFGVARHLVNLEVVNTYEGTHDIHALILGRAQTGIQAF 395 (396)
T ss_dssp HCSCSCSGGGHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHSCCCC
T ss_pred hCcccccCCCcHHHHHhhhcCceeecCHHHHHHHHHHHHHhCcccc
Confidence 9999999999999999999999999999999999999999999986
No 5
>1r2j_A Protein FKBI; polyketide synthase, polyketide, acyl-COA dehydrogenase, , aldehyde dehydrogenase, oxidoreductase; HET: FAD; 2.10A {Streptomyces hygroscopicus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=1.1e-58 Score=416.07 Aligned_cols=279 Identities=23% Similarity=0.322 Sum_probs=258.0
Q ss_pred hhhhcCCHHHHHHHhHhhhccccceeEEecCCCCCCCcCCCeeEEEEECCEEEEEeEEEeecCCCCCCEEEEEEEeCCCC
Q 022503 3 TIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNSTFADVLVVMARNTTTK 82 (296)
Q Consensus 3 ~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~gs~~~~~~~~a~~~~~g~~l~G~K~~vt~~~~a~~~lv~a~~~~~~ 82 (296)
+|. +|+++||++|||++++|+ ++++++|||++|||...+.|+|++++|||+|||.|.|+|++..||+++|++++++ +
T Consensus 85 ~l~-~g~~~q~~~~l~~~~~G~-~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~-~ 161 (366)
T 1r2j_A 85 VQR-LGDAGQRATFLKELTSGK-LAAVGFSERQAGSDLSAMRTRVRLDGDTAVVDGHKVWTTAAAYADHLVVFGLQED-G 161 (366)
T ss_dssp HHH-HSCHHHHHHHHHHTTCC--CEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEETTTTTCSEEEEEEBCSS-S
T ss_pred HHH-hCCHHHHHHHHHHHhCCC-eeEEEeCCCCCCCchhhCEeEEEEeCCEEEEEEEEecccCCcccCEEEEEEEeCC-C
Confidence 567 999999999999999999 9999999999999999999999999999999999999999999999999999864 3
Q ss_pred CeEEEEEeCCCCCeEEeecccccccccccccceEeeeeeeCCCCCCCCC-CChHHh-hhhhhHHHHHHHHHHHHHHHHHH
Q 022503 83 KINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPDEDRLPGF-NSFQDT-NIPLSVARVMVAWQTIGISIGVY 160 (296)
Q Consensus 83 ~~~~flv~~~~~Gv~~~~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~~~-~~~~~~-~~~~~~~r~~~aa~~~G~~~~~l 160 (296)
++++|+||++.|||++.+.|+++|++++++++++||||+||+++++|.+ .++... ...+...|+.+++.++|++++++
T Consensus 162 g~~~flV~~~~~Gv~~~~~~~~~G~r~~~~~~v~f~~v~Vp~~~~lg~~~~g~~~~~~~~l~~~r~~~aa~~~G~a~~al 241 (366)
T 1r2j_A 162 SGAVVVVPADTPGVRVERVPKPSGCRAAGHADLHLDQVRVPAGAVLAGSGASLPMLVAASLAYGRKSVAWGCVGILRACR 241 (366)
T ss_dssp CCEEEEEETTSTTEEEEECSSCSSSTTSCCEEEEEEEEEEEGGGBCTTTTSCTTTTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEECCCCCeEecCCcCCccCCCCCeeEEEEeeEEEcHHHcCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999999999999876 567766 77888999999999999999999
Q ss_pred HHHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 022503 161 DMCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENG-KMSLGQASLGKAWVSARARETVALGREL 239 (296)
Q Consensus 161 ~~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~~-~~~~~~~~~~K~~a~~~a~~~~~~~~~~ 239 (296)
+.+++|+++|++||+|++++|.+|+++++|.++++++|++++++++.+|.+ .+....++++|+++++.+.++++.++|+
T Consensus 242 ~~a~~ya~~R~~fg~~i~~~q~v~~~la~~~~~~~~ar~~~~~aa~~~~~g~~~~~~~~~~aK~~a~~~a~~~~~~a~q~ 321 (366)
T 1r2j_A 242 TAAVAHARTREQFGRPLGDHQLVAGHIADLWTAEQIAARVCEYASDHWDEGSPEMVPATILAKHVAAERAAAGAATAAQV 321 (366)
T ss_dssp HHHHHHHTTCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCccCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999876 5667789999999999999999999999
Q ss_pred hCCCCCcCcChHHHHhhhcCCcccccchHHHHHHHHHHHHhcCcC
Q 022503 240 LGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITGFAS 284 (296)
Q Consensus 240 ~G~~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~~~~~~l~~~~ 284 (296)
+||.||+++++++|+|||++...+++|++++++..+++.++|+|+
T Consensus 322 ~Gg~g~~~~~~~~r~~Rda~~~~~~~G~~~~~~~~ia~~~lgl~~ 366 (366)
T 1r2j_A 322 LASAGAREGHVVERAYRDAKLMEIIEGSSEMCRVMLAQHALALPA 366 (366)
T ss_dssp HGGGGC--CCHHHHHHHHHHHHHHSSSCHHHHHHHHHHHHTTCC-
T ss_pred hCCeeecCCCcHHHHHHhccCceecCCHHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999999874
No 6
>3p4t_A Putative acyl-COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FAO; 1.70A {Mycobacterium smegmatis} PDB: 3oib_A*
Probab=100.00 E-value=4.6e-58 Score=416.97 Aligned_cols=282 Identities=23% Similarity=0.343 Sum_probs=269.8
Q ss_pred hhhhhcCCHHHHHHHhHhhhccccceeEEecCCCCCCCcCCCeeEEEEECCEEEEEeEEEeecCCCCCCEEEEEEEeCCC
Q 022503 2 LTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNSTFADVLVVMARNTTT 81 (296)
Q Consensus 2 ~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~gs~~~~~~~~a~~~~~g~~l~G~K~~vt~~~~a~~~lv~a~~~~~ 81 (296)
.+|..+|+++||++|||++++|+.++++++|||++|||...+.|++++++|||+|||.|.|+|++..||+++|+++++++
T Consensus 118 ~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v~a~~~~~ 197 (403)
T 3p4t_A 118 PHMIASGDQRLIDTYVRPTLRGEKIGALAITEPGGGSDVGHLRTRADLDGDHYVINGAKTYITSGVRADYVVTAARTGGP 197 (403)
T ss_dssp HHHHHHTCHHHHHHTHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEECSSS
T ss_pred HHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccceEEEEEeCCEEEEEEEEEEecCCcccCEEEEEEEeCCC
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999998653
Q ss_pred --CCeEEEEEeCCCCCeEEeecccccccccccccceEeeeeeeCCCCCCCCC-CChHHhhhhhhHHHHHHHHHHHHHHHH
Q 022503 82 --KKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPDEDRLPGF-NSFQDTNIPLSVARVMVAWQTIGISIG 158 (296)
Q Consensus 82 --~~~~~flv~~~~~Gv~~~~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~~~-~~~~~~~~~~~~~r~~~aa~~~G~~~~ 158 (296)
+++++|+||.+.|||++.+.|+++|++++++++++||||+||++++||.+ .++......+...|+.+++.++|++++
T Consensus 198 ~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~ 277 (403)
T 3p4t_A 198 GAGGVSLIVVDKGTPGFEVTRKLDKMGWRSSDTAELSYTDVRVPVANLVGSENTGFAQIAAAFVAERVGLATQAYAGAQR 277 (403)
T ss_dssp SGGGEEEEEEETTCTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEeCCCCCeEecCCCCcccCCCCCeeEEEEcceEecHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999876 567888888999999999999999999
Q ss_pred HHHHHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC-hhHHHHHHHHHHHHHHHHHHHHH
Q 022503 159 VYDMCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMS-LGQASLGKAWVSARARETVALGR 237 (296)
Q Consensus 159 ~l~~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~~~~K~~a~~~a~~~~~~~~ 237 (296)
+++.+++|+++|++||+|++++|.+|++++++.++++++|++++++++.+|.+.+. ...++++|+++++.+.++++.++
T Consensus 278 al~~a~~~a~~R~~fg~pi~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~aK~~a~~~a~~v~~~a~ 357 (403)
T 3p4t_A 278 CLDLTVEWCRNRDTFGRPLISRQAVQNTLAGMARRIDVARVYTRHVVERQLAGETNLIAEVCFAKNTAVEAGEWVANQAV 357 (403)
T ss_dssp HHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCchhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988766 77899999999999999999999
Q ss_pred HHhCCCCCcCcChHHHHhhhcCCcccccchHHHHHHHHHHHHhcCcC
Q 022503 238 ELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITGFAS 284 (296)
Q Consensus 238 ~~~G~~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~~~~~~l~~~~ 284 (296)
|++||.||+++++++|+|||++...+++|++++++..+++.+ |+|+
T Consensus 358 q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~l-glps 403 (403)
T 3p4t_A 358 QLFGGMGYMAESEVERQYRDMRILGIGGGTTEILTSLAAKTL-GFQS 403 (403)
T ss_dssp HHHGGGGGBTTSHHHHHHHHHTTTTTTTSCHHHHHHHHHHHH-TTTC
T ss_pred HhhChhhccCCCcHHHHHHHhhcceeccCHHHHHHHHHHHHc-CCCC
Confidence 999999999999999999999999999999999999999998 8874
No 7
>2eba_A Putative glutaryl-COA dehydrogenase; thermus thermophilius, FAD, STRU genomics, NPPSFA; HET: FAD; 2.21A {Thermus thermophilus}
Probab=100.00 E-value=7.4e-58 Score=413.41 Aligned_cols=281 Identities=34% Similarity=0.576 Sum_probs=264.8
Q ss_pred hhhhcCCHHHHHHHhHhhhccccceeEEecCCCCCCCc-CCCeeEEEEECCEEEEEeEEEeecCCCCCCEEEEEEEeCCC
Q 022503 3 TIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDA-SALSTAATKVEGGWILEGQKRWIGNSTFADVLVVMARNTTT 81 (296)
Q Consensus 3 ~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~gs~~-~~~~~~a~~~~~g~~l~G~K~~vt~~~~a~~~lv~a~~~~~ 81 (296)
+|..+|+++||++|||++.+|+.++++++|||+.|||. ..+.|+|++++|||+|||.|.|+||+..||+++|+++++++
T Consensus 103 ~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~g 182 (385)
T 2eba_A 103 PIYAYGSEEQKREFLPKLARGEMVGCFGLTEPDGGSDPYGNMKTRARREGDTWVLNGTKMWITNGNLAHLAVIWAKDEGG 182 (385)
T ss_dssp HHHHHSCHHHHHHHHHHHHTTSSCEEEECCCTTCTTSTTTTCCCEEEC--CEEEEEEEEEEEETTTTCSEEEEEEECC--
T ss_pred HHHHhCCHHHHHHHHHHHhCCCeEEEEEeCCCCcCCCccccCeeEEEEeCCEEEEEeeeeccCCCcccCEEEEEEEeCCC
Confidence 57789999999999999999999999999999999999 89999999999999999999999999999999999998632
Q ss_pred CCeEEEEEeCCCCCeEEeecccccccccccccceEeeeeeeCCCCCCCCCCChHHhhhhhhHHHHHHHHHHHHHHHHHHH
Q 022503 82 KKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPDEDRLPGFNSFQDTNIPLSVARVMVAWQTIGISIGVYD 161 (296)
Q Consensus 82 ~~~~~flv~~~~~Gv~~~~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~~~~~~~~~~~~~~~~r~~~aa~~~G~~~~~l~ 161 (296)
.+++|+||++.|||++.+.|+++|+++++++++.|+||+||+++++..+.++......+...|+.+++.++|+++++++
T Consensus 183 -~~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~l~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~ 261 (385)
T 2eba_A 183 -EVLGFLVPTDTPGFQAREVKRKMSLRASVTSELVLEEVRVPESLRLPKALGLKAPLSCLTQARFGIAWGAMGALEAVYE 261 (385)
T ss_dssp --EEEEEEETTSTTEEEEECCSBSSSCSSCEEEEEEEEEEEEGGGBCTTCCSTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -cEEEEEEeCCCCCeEecccccccccccCceeEEEEccEEEcHHHccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3889999999999999999999999999999999999999999999444677777788888999999999999999999
Q ss_pred HHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 022503 162 MCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGRELLG 241 (296)
Q Consensus 162 ~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~K~~a~~~a~~~~~~~~~~~G 241 (296)
.+++|+++|++||+|++++|.+|++++++.++++++|++++++++.+|.+.+....++++|.++++.+.++++.++|+||
T Consensus 262 ~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~g~~~~~~~~~aK~~a~~~a~~v~~~a~q~~G 341 (385)
T 2eba_A 262 EAVAFAKSRSTFGEPLAKKQLVQAKLAEMLAWHTEGLLLAWRLARLKDEGKLTPAQVSLAKRQNVWKALQAARMARDILG 341 (385)
T ss_dssp HHHHHHHHCBSSSSBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHhhCeeCCeeHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999987777778899999999999999999999999
Q ss_pred CCCCcCcChHHHHhhhcCCcccccchHHHHHHHHHHHHhcCcC
Q 022503 242 GNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITGFAS 284 (296)
Q Consensus 242 ~~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~~~~~~l~~~~ 284 (296)
|.||+++++++|+|||++...+++|++++++..+++.++|+|+
T Consensus 342 g~g~~~~~~l~r~~Rda~~~~~~~G~~~~~~~~ia~~llgl~~ 384 (385)
T 2eba_A 342 GSGITLEYHAIRHMLNLETVYTYEGTHDVHTLVLGREITGLNA 384 (385)
T ss_dssp GGGGBTTSSHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHSCCC
T ss_pred CcccCCcChHHHHHHhccCceeeCChHHHHHHHHHHHHhCcCC
Confidence 9999999999999999999999999999999999999999885
No 8
>2dvl_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project on protein STR and functional analyses; HET: FAD; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=5.4e-58 Score=412.49 Aligned_cols=278 Identities=35% Similarity=0.509 Sum_probs=266.3
Q ss_pred hhhhhcCCHHHHHHHhHhhhccccceeEEecCCCCCCCcCCCeeEEEEECCEEEEEeEEEeecCCCCCCEEEEEEEeCCC
Q 022503 2 LTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNSTFADVLVVMARNTTT 81 (296)
Q Consensus 2 ~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~gs~~~~~~~~a~~~~~g~~l~G~K~~vt~~~~a~~~lv~a~~~~~ 81 (296)
.+|..+|+++||++|||++.+|+.++++++|||+.|||...+.|+|++++|||+|||.|.|+||+..||+++|++++++
T Consensus 94 ~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~- 172 (372)
T 2dvl_A 94 YMLLRFGSEAQKRRYLVPLARGEWIGAFCLTEPQAGSDAKSLRAEARRVKGGFVLNGVKSWITSAGHAHLYVVMARTEK- 172 (372)
T ss_dssp HHHHHHCCHHHHHHTHHHHHTTSSCEEEECCCSSCSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEEETT-
T ss_pred HHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCChhhCeeEEEEECCEEEEEeEEEeecCCCcCCEEEEEEEeCC-
Confidence 3577899999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CCeEEEEEeCCCCCeEEeecccccccccccccceEeeeeeeCCCCCCCCC-CChHHhhhhhhHHHHHHHHHHHHHHHHHH
Q 022503 82 KKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPDEDRLPGF-NSFQDTNIPLSVARVMVAWQTIGISIGVY 160 (296)
Q Consensus 82 ~~~~~flv~~~~~Gv~~~~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~~~-~~~~~~~~~~~~~r~~~aa~~~G~~~~~l 160 (296)
++++|+||++.|||++.+.|+++|+++++++++.||||+||+++++|.+ .++......+...|+.+++.++|++++++
T Consensus 173 -g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al 251 (372)
T 2dvl_A 173 -GISAFLVEKGTPGLSFGRPEEKMGLHAAHTAEVRLEEVFVPEENLLGEEGRGLAYALAGLDSGRVGVAAQAVGIARGAF 251 (372)
T ss_dssp -EEEEEEEETTCTTEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CcEEEEEeCCCCCeEecCcccccccCcCCeeEEEECcEEeCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999999999999876 56777778888999999999999999999
Q ss_pred HHHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHHHHHHHHHHh
Q 022503 161 DMCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGRELL 240 (296)
Q Consensus 161 ~~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~K~~a~~~a~~~~~~~~~~~ 240 (296)
+.+++|+++|++||+|++++|.+|+++++|.+++++++++++++++.+|.+.+....++++|+++++.+.++++.++|+|
T Consensus 252 ~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~~~~~~a~q~~ 331 (372)
T 2dvl_A 252 EIAKAYAEEREQFGKKLKEHQAIAFKIADMHVKIAAARALVLEAARKKDRGERFTLEASAAKLFASAAAVEVTREAVQVL 331 (372)
T ss_dssp HHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhCcccCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999998877778899999999999999999999999
Q ss_pred CCCCCcCcChHHHHhhhcCCcccccchHHHHHHHHHHHHhc
Q 022503 241 GGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITG 281 (296)
Q Consensus 241 G~~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~~~~~~l~ 281 (296)
||.||+++++++|+|||++...+++|++++++..+++.+++
T Consensus 332 Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 372 (372)
T 2dvl_A 332 GGYGYHRDYRVERYYRDAKVTEIYEGTSEIQRLVIARELYR 372 (372)
T ss_dssp GGGGGSGGGSHHHHHHHHHGGGTTTSCHHHHHHHHHHHHHC
T ss_pred cCeecCCCCcHHHHHHHhhcceecCCHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999875
No 9
>2d29_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: FAD; 1.65A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 PDB: 1ws9_A 2cx9_A*
Probab=100.00 E-value=7.7e-58 Score=413.54 Aligned_cols=281 Identities=33% Similarity=0.510 Sum_probs=267.1
Q ss_pred hhhhhcCCHHHHHHHhHhhhccccceeEEecCCCCCCCcCCCeeEEEEECCEEEEEeEEEeecCCCCCCEEEEEEEeCCC
Q 022503 2 LTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNSTFADVLVVMARNTTT 81 (296)
Q Consensus 2 ~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~gs~~~~~~~~a~~~~~g~~l~G~K~~vt~~~~a~~~lv~a~~~~~ 81 (296)
.+|..+|+++||++|||++++|+.++++++|||++|||...+.|+|++++|||+|||+|.|+||+..||+++|+++++++
T Consensus 98 ~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~ 177 (387)
T 2d29_A 98 GHILLAGSEAQKEAFLPKLASGEALGAWGLTEPGSGSDAAALKTKAEKVEGGWRLNGTKQFITQGSVAGVYVVMARTDPP 177 (387)
T ss_dssp HHHHHHCCHHHHHHHHHHHHTSSSCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEECSCC
T ss_pred HHHHHhCCHHHHHHHHHHHhCCCceEEEEeCCCCCCCCHhhCceEEEEeCCEEEEEeEEeccCCCCcCCEEEEEEEeCCc
Confidence 35778999999999999999999999999999999999999999999999999999999999999999999999998632
Q ss_pred -------CCeEEEEEeCCCCCeEEeecccccccccccccceEeeeeeeCCCCCCCCC-CChHHhhhhhhHHHHHHHHHHH
Q 022503 82 -------KKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPDEDRLPGF-NSFQDTNIPLSVARVMVAWQTI 153 (296)
Q Consensus 82 -------~~~~~flv~~~~~Gv~~~~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~~~-~~~~~~~~~~~~~r~~~aa~~~ 153 (296)
+++++|+||++.|||++.+.|+++|++++++++++||||+||+++++|.+ .++......+...|+.+++.++
T Consensus 178 ~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~ 257 (387)
T 2d29_A 178 PSPERKHQGISAFAFFRPERGLKVGRKEEKLGLTASDTAQLILEDLFVPEEALLGERGKGFYDVLRVLDGGRIGIAAMAV 257 (387)
T ss_dssp SCGGGTTTTEEEEEEECCSSSEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCCeEEEEEeCCCCCeeccCcccccCCCCCCeeEEEEeeEEECHHHcCCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 26999999999999999999999999999999999999999999999876 5677777888999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHHHH
Q 022503 154 GISIGVYDMCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETV 233 (296)
Q Consensus 154 G~~~~~l~~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~K~~a~~~a~~~~ 233 (296)
|+++++++.+++|+++|++||+|++++|.+|++++++.++++++|++++++++.+|.+.+....++++|+++++.+.+++
T Consensus 258 G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~~~~ 337 (387)
T 2d29_A 258 GLGQAALDYALAYAKGREAFGRPIAEFEGVSFKLAEAATELEAARLLYLKAAELKDAGRPFTLEAAQAKLFASEAAVKAC 337 (387)
T ss_dssp HHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCccCCcchHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999877667789999999999999999
Q ss_pred HHHHHHhCCCCCcCcChHHHHhhhcCCcccccchHHHHHHHHHHHHhcC
Q 022503 234 ALGRELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITGF 282 (296)
Q Consensus 234 ~~~~~~~G~~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~~~~~~l~~ 282 (296)
+.++|++||.||+++++++|+|||++...+++|++++++..+++.+++.
T Consensus 338 ~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~G~~~i~~~~ia~~~l~~ 386 (387)
T 2d29_A 338 DEAIQILGGYGYVKDYPVERYWRDARLTRIGEGTSEILKLVIARRLLEA 386 (387)
T ss_dssp HHHHHHHGGGGGSTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHHT
T ss_pred HHHHHhcCCeecCCCChHHHHHHHhhCccccCCHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999998863
No 10
>1ukw_A Acyl-COA dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 2.40A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=5.7e-58 Score=413.29 Aligned_cols=280 Identities=33% Similarity=0.494 Sum_probs=266.8
Q ss_pred hhhhhcCCHHHHHHHhHhhhccccceeEEecCCCCCCCcCCCeeEEEEECCEEEEEeEEEeecCCCCCCEEEEEEEeCCC
Q 022503 2 LTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNSTFADVLVVMARNTTT 81 (296)
Q Consensus 2 ~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~gs~~~~~~~~a~~~~~g~~l~G~K~~vt~~~~a~~~lv~a~~~~~ 81 (296)
.+|..+|+++||++|||++++|+.++++++|||++|||...+.|+|++++|||+|||.|.|+||+..||+++|+++++++
T Consensus 95 ~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~ 174 (379)
T 1ukw_A 95 TPVLLAGTEEQKERFLRPLTEKPALAAFALSEPGNGSDAAALKTRAIRQGDHYVLNGTKMWISNGGEAEWVVVFATVNPE 174 (379)
T ss_dssp HHHHHHCCHHHHHHHHGGGTSSSCEEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTEEEEEEEEESCGG
T ss_pred HHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCcChhhCeEEEEEeCCEEEEEEEEecccCCCcCCEEEEEEEcCCC
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999999998632
Q ss_pred ---CCeEEEEEeCCCCCeEEeecccccccccccccceEeeeeeeCCCCCCCCC-CChHHhhhhhhHHHHHHHHHHHHHHH
Q 022503 82 ---KKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPDEDRLPGF-NSFQDTNIPLSVARVMVAWQTIGISI 157 (296)
Q Consensus 82 ---~~~~~flv~~~~~Gv~~~~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~~~-~~~~~~~~~~~~~r~~~aa~~~G~~~ 157 (296)
+++++|+||.+.|||++.+.|+++|+++++++++.||||+||+++++|.+ .++......+...|+.+++.++|+++
T Consensus 175 ~~~~g~~~flV~~~~~Gv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~ 254 (379)
T 1ukw_A 175 LRHKGVVALVVERGTPGFKAIKIHGKMGQRASGTYELVFEDVKVPVENRLGEEGEGFKIAMQTLNKTRIPVAAGSVGVAR 254 (379)
T ss_dssp GGGGGEEEEEEETTCTTEEEEECCCCSSCTTSCEEEEEEEEEEEEGGGEESCTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEEeCCCCCeEecCccccccCCCCCeeEEEEeeEEecHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999876 56777778888999999999999999
Q ss_pred HHHHHHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 022503 158 GVYDMCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGR 237 (296)
Q Consensus 158 ~~l~~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~K~~a~~~a~~~~~~~~ 237 (296)
++++.+++|+++|++||+|++++|.+|++++++.++++++|++++++++.+|.+.+....++++|+++++.+.++++.++
T Consensus 255 ~al~~~~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~g~~~~~~~~~aK~~a~~~a~~~~~~a~ 334 (379)
T 1ukw_A 255 RALDEARKYAKEREAFGEPIANFQAIQFKLVDMLIGIETARMYTYYAAWLADQGLPHAHASAIAKAYASEIAFEAANQAI 334 (379)
T ss_dssp HHHHHHHHHHHHCBSSSSBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998777778899999999999999999999
Q ss_pred HHhCCCCCcCcChHHHHhhhcCCcccccchHHHHHHHHHHHHhc
Q 022503 238 ELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITG 281 (296)
Q Consensus 238 ~~~G~~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~~~~~~l~ 281 (296)
|++||.||+++++++|+|||++...+++|++++++..+++.+++
T Consensus 335 q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 378 (379)
T 1ukw_A 335 QIHGGYGYVREFPVEKLLRDVKLNQIYEGTNEIQRLIIARHILA 378 (379)
T ss_dssp HHHGGGGGSTTSSHHHHHHHHHGGGTTTSCHHHHHHHHHHHHHC
T ss_pred HhhCCeecCCCChHHHHHHHhcCceecCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999876
No 11
>3pfd_A Acyl-COA dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: FDA; 2.10A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=4e-58 Score=416.16 Aligned_cols=280 Identities=30% Similarity=0.428 Sum_probs=265.5
Q ss_pred hhhhhcCCHHHHHHHhHhhhccccceeEEecCCCCCCCcCCCeeEEEEECCEEEEEeEEEeecCCCCCCEEEEEEEeCCC
Q 022503 2 LTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNSTFADVLVVMARNTTT 81 (296)
Q Consensus 2 ~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~gs~~~~~~~~a~~~~~g~~l~G~K~~vt~~~~a~~~lv~a~~~~~ 81 (296)
.+|..+|+++||++|||++.+|+.++++++|||++|||...+.|+|++++|||+|||.|.|+||+..||+++|+++++++
T Consensus 109 ~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~ 188 (393)
T 3pfd_A 109 MGLILRGSEELKKQVLPAVASGEAMASYALSEREAGSDAASMRTRAVADGDDWILNGSKCWITNGGKSTWYTVMAVTDPD 188 (393)
T ss_dssp HHHHHHCCHHHHHHHHHHHHTTSCCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEESCGG
T ss_pred HHHHHhCCHHHHHHHHHHHhCCCceeEEEEcCCCCCCCcccCeeEEEEcCCEEEEeeEEEEecCCcccCEEEEEEEeCCC
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999999998643
Q ss_pred ---CCeEEEEEeCCCCCeEEeecccccccccccccceEeeeeeeCCCCCCCCC-CChHHhhhhhhHHHHHHHHHHHHHHH
Q 022503 82 ---KKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPDEDRLPGF-NSFQDTNIPLSVARVMVAWQTIGISI 157 (296)
Q Consensus 82 ---~~~~~flv~~~~~Gv~~~~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~~~-~~~~~~~~~~~~~r~~~aa~~~G~~~ 157 (296)
+++++|+||++.|||++.+.|+++|+++++++++.||||+||++++||.+ .++......+...|+.+++.++|+++
T Consensus 189 ~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~ 268 (393)
T 3pfd_A 189 KGANGISAFMVHKDDEGFTVGPKERKLGIKGSPTTELYFENCRIPGDRIIGEPGTGFKTALATLDHTRPTIGAQAVGIAQ 268 (393)
T ss_dssp GGGGGEEEEEEETTSTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCCCceEEEEEECCCCCeEecCCCCcccCCCCCceEEEEccEEEcHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999876 57788888899999999999999999
Q ss_pred HHHHHHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-ChhHHHHHHHHHHHHHHHHHHHH
Q 022503 158 GVYDMCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKM-SLGQASLGKAWVSARARETVALG 236 (296)
Q Consensus 158 ~~l~~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~~~~-~~~~~~~~K~~a~~~a~~~~~~~ 236 (296)
++++.+++|+++|.+||+|++++|.+|++|+++.++++++|++++++++.+|.+.+ ....++++|+++++.+.++++.+
T Consensus 269 ~al~~a~~~a~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~~~aK~~a~~~a~~~~~~a 348 (393)
T 3pfd_A 269 GALDAAIAYTKERKQFGRPVSDNQGVQFMLADMAMKIEAARLMVYSAAARAERGEGDLGFISAASKCFASDVAMEVTTDA 348 (393)
T ss_dssp HHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998765 56788999999999999999999
Q ss_pred HHHhCCCCCcCcChHHHHhhhcCCcccccchHHHHHHHHHHHHhc
Q 022503 237 RELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITG 281 (296)
Q Consensus 237 ~~~~G~~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~~~~~~l~ 281 (296)
+|++||.||+++++++|+|||++...+++|++++++.+|++.++|
T Consensus 349 ~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~ll~ 393 (393)
T 3pfd_A 349 VQLFGGYGYTQDFPVERMMRDAKITQIYEGTNQIQRVVMSRALLR 393 (393)
T ss_dssp HHHTGGGGGBTTSSHHHHHHHHHHHTTSSSCHHHHHHHHHHHHTC
T ss_pred HHHhchhhccCCChHHHHHHhhcceeeecCHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999986
No 12
>3r7k_A Probable acyl COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FDA; 2.50A {Mycobacterium abscessus}
Probab=100.00 E-value=1.3e-57 Score=414.04 Aligned_cols=278 Identities=23% Similarity=0.354 Sum_probs=266.9
Q ss_pred hhhhhcCCHHHHHHHhHhhhccccceeEEecCCCCCCCcCCCeeEEEEECCEEEEEeEEEeecCCCCCCEEEEEEEeCCC
Q 022503 2 LTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNSTFADVLVVMARNTTT 81 (296)
Q Consensus 2 ~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~gs~~~~~~~~a~~~~~g~~l~G~K~~vt~~~~a~~~lv~a~~~~~ 81 (296)
.+|..+|+++||++|||++++|+.++++++|||++|||...+.|+|++++|||+|||.|.|+|++..||+++|+++++++
T Consensus 121 ~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v~a~~~~~ 200 (403)
T 3r7k_A 121 PHIAANGSDALIERYVRPTLAGKMIGSLGVTEPGAGSDVANLRTRAVREGDTYVVNGAKTFITSGVRADFVTTAVRTGGP 200 (403)
T ss_dssp HHHHHHCCHHHHHHHHHHHHTTSCCEEEECCBTTBSSCGGGCCCEEEECSSEEEEEEEEEEEETTTTCSEEEEEEECSSS
T ss_pred HHHHHhCCHHHHHHHHHHHhCCCeeEEEEecCCCCCCChhhceEEEEEECCEEEEEEEEEcccCCccCCEEEEEEEcCCC
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999998652
Q ss_pred --CCeEEEEEeCCCCCeEEeecccccccccccccceEeeeeeeCCCCCCCCC-CChHHhhhhhhHHHHHHHHHHHHHHHH
Q 022503 82 --KKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPDEDRLPGF-NSFQDTNIPLSVARVMVAWQTIGISIG 158 (296)
Q Consensus 82 --~~~~~flv~~~~~Gv~~~~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~~~-~~~~~~~~~~~~~r~~~aa~~~G~~~~ 158 (296)
+++++|+||++.|||++.+.|+++|++++++++++||||+||+++++|.. .++......+...|+.+++.++|++++
T Consensus 201 ~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~ 280 (403)
T 3r7k_A 201 GYGGVSLLVIDKNSPGFEVSRRLDKMGWRCSDTAELSFVDVRVPADNLVGAENSGFLQIMQQFQAERLGIAVQAYATAGR 280 (403)
T ss_dssp SGGGEEEEEEETTCTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEeCCCCCeEecCcccccCCCCCCceEEEEeeEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999876 567888888999999999999999999
Q ss_pred HHHHHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 022503 159 VYDMCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGRE 238 (296)
Q Consensus 159 ~l~~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~K~~a~~~a~~~~~~~~~ 238 (296)
+++.+++|+++|++||+|++++|.+|++|++|.++++++|++++++++.+|.+.+....++++|+++++.+.++++.++|
T Consensus 281 al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~aK~~a~~~a~~v~~~a~q 360 (403)
T 3r7k_A 281 ALDLAKSWARERETFGRPLTGRQIIRHKLAEMARQVDVACTYTRAVMQRWLAGEDVVAEVSMAKNTAVYACDYVVNEAVQ 360 (403)
T ss_dssp HHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCccCCCchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998777888999999999999999999999
Q ss_pred HhCCCCCcCcChHHHHhhhcCCcccccchHHHHHHHHHHHH
Q 022503 239 LLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREI 279 (296)
Q Consensus 239 ~~G~~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~~~~~~ 279 (296)
+|||.||+++++++|+|||++...+++|++++++..|++.+
T Consensus 361 ~~Gg~G~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~l 401 (403)
T 3r7k_A 361 IFGGMGYMRESEIERHYRDCRILGIGGGTNEIMNEVIAKRI 401 (403)
T ss_dssp HHGGGGGBTTSHHHHHHHHHTTTTTTTSCHHHHHHHHHHHH
T ss_pred hcCCeEecCCchHHHHHHHhCcceeecCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999876
No 13
>1egd_A Medium chain acyl-COA dehydrogenase; flavoprotein, electron transfer; HET: FAD; 2.40A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 1egc_A* 1ege_A* 1t9g_A* 2a1t_A* 1udy_A* 3mdd_A* 3mde_A*
Probab=100.00 E-value=1.6e-57 Score=412.51 Aligned_cols=281 Identities=30% Similarity=0.443 Sum_probs=267.3
Q ss_pred hhhhcCCHHHHHHHhHhhhccccceeEEecCCCCCCCcCCCeeEEEEECCEEEEEeEEEeecCCCCCCEEEEEEEeCCC-
Q 022503 3 TIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNSTFADVLVVMARNTTT- 81 (296)
Q Consensus 3 ~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~gs~~~~~~~~a~~~~~g~~l~G~K~~vt~~~~a~~~lv~a~~~~~- 81 (296)
+|..+|+++||++|||++++|+.++++++|||++|||...+.|+|++++|||+|||.|.|+||+..||+++|+++++++
T Consensus 107 ~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~ 186 (396)
T 1egd_A 107 PIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFLLARSDPDP 186 (396)
T ss_dssp HHHHHCCHHHHHHHHHHHHHSCCCEEEECCBTTBSSSGGGCCCEEEECSSEEEEEEEEEEEETTTTCSEEEEEEECCCCT
T ss_pred HHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCcchhhCeeEEEEeCCEEEEEEEEEcccCCcccCEEEEEEEeCCCC
Confidence 4778999999999999999999999999999999999999999999999999999999999999999999999998643
Q ss_pred -----CCeEEEEEeCCCCCeEEeecccccccccccccceEeeeeeeCCCCCCCCC-CChHHhhhhhhHHHHHHHHHHHHH
Q 022503 82 -----KKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPDEDRLPGF-NSFQDTNIPLSVARVMVAWQTIGI 155 (296)
Q Consensus 82 -----~~~~~flv~~~~~Gv~~~~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~~~-~~~~~~~~~~~~~r~~~aa~~~G~ 155 (296)
.++++|+||.+.|||++.+.|+++|++++++++++||||+||++++||.+ .++......+...|+.+++.++|+
T Consensus 187 ~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~ 266 (396)
T 1egd_A 187 KAPANKAFTGFIVEADTPGIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVAMGAFDKERPVVAAGAVGL 266 (396)
T ss_dssp TSCGGGTEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGBSSSTTBHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCeEEEEEeCCCCCeeeCCccccccccCCCeeEEEECcEEECHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999876 567777788889999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHHHHHH
Q 022503 156 SIGVYDMCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVAL 235 (296)
Q Consensus 156 ~~~~l~~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~K~~a~~~a~~~~~~ 235 (296)
++++++.+++|+++|++||+|++++|.+|++|+++.+++++++++++++++.+|.+.+....++++|+++++.+.++++.
T Consensus 267 a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~~~~~~ 346 (396)
T 1egd_A 267 AQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNTYYASIAKAFAGDIANQLATD 346 (396)
T ss_dssp HHHHHHHHHHHHTTCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999987777778999999999999999999
Q ss_pred HHHHhCCCCCcCcChHHHHhhhcCCcccccchHHHHHHHHHHHHhcCc
Q 022503 236 GRELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITGFA 283 (296)
Q Consensus 236 ~~~~~G~~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~~~~~~l~~~ 283 (296)
++|++||.||+++++++|+|||++...+++|++++++..+++.+++..
T Consensus 347 a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~~~ 394 (396)
T 1egd_A 347 AVQILGGNGFNTEYPVEKLMRDAKIYQIYGGTSQIQRLIVAREHIDKY 394 (396)
T ss_dssp HHHHHGGGTTBTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHHTT
T ss_pred HHHHhCcccccCCChHHHHHHHhhCeeecCCHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999998743
No 14
>1buc_A Butyryl-COA dehydrogenase; acyl-COA dehydrogenase short-chain acyl-COA dehydrogenase, flavoprotein, oxidoreductase; HET: CAA FAD; 2.50A {Megasphaera elsdenii} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=2.2e-57 Score=410.11 Aligned_cols=280 Identities=31% Similarity=0.430 Sum_probs=266.3
Q ss_pred hhhhhcCCHHHHHHHhHhhhccccceeEEecCCCCCCCcCCCeeEEEEE-CCEEEEEeEEEeecCCCCCCEEEEEEEeCC
Q 022503 2 LTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKV-EGGWILEGQKRWIGNSTFADVLVVMARNTT 80 (296)
Q Consensus 2 ~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~gs~~~~~~~~a~~~-~~g~~l~G~K~~vt~~~~a~~~lv~a~~~~ 80 (296)
.+|..+|+++||++|||++.+|+.++++++|||++|||...+.|+|+++ +|||+|||.|.|+||+..||+++|++++++
T Consensus 99 ~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~ 178 (383)
T 1buc_A 99 NPIWQFGTEAQKEKFLVPLVEGTKLGAFGLTEPNAGTDASGQQTIATKNDDGTYTLNGSKIFITNGGAADIYIVFAMTDK 178 (383)
T ss_dssp HHHHHHCCHHHHHHTHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEECTTSCEEEEEEEEEEETTTTCSEEEEEEESCS
T ss_pred HHHHHhCCHHHHHHHHHHHhCCCeeEEEEeCCCCCCCChhhCEeEEEEcCCCEEEEEEEEeccCCCCcCCEEEEEEEeCC
Confidence 3577899999999999999999999999999999999999999999999 999999999999999999999999999863
Q ss_pred C---CCeEEEEEeCCCCCeEEeecccccccccccccceEeeeeeeCCCCCCCCC-CChHHhhhhhhHHHHHHHHHHHHHH
Q 022503 81 T---KKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPDEDRLPGF-NSFQDTNIPLSVARVMVAWQTIGIS 156 (296)
Q Consensus 81 ~---~~~~~flv~~~~~Gv~~~~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~~~-~~~~~~~~~~~~~r~~~aa~~~G~~ 156 (296)
+ +++++|+||++.|||++.+.|+++|+++++++++.|+||+||++++||.+ .++......+...|+.+++.++|++
T Consensus 179 ~~~~~g~~~flV~~~~~Gv~v~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a 258 (383)
T 1buc_A 179 SKGNHGITAFILEDGTPGFTYGKKEDKMGIHTSQTMELVFQDVKVPAENMLGEEGKGFKIAMMTLDGGRIGVAAQALGIA 258 (383)
T ss_dssp SSSTTSEEEEEEETTCTTEEEEEECCCSSCTTSCEEEEEEEEEEECGGGEESCTTBHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCceEEEEEECCCCCeEecCccccccccCCceeEEEEccEEeCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 46999999999999999999999999999999999999999999999876 5677777888899999999999999
Q ss_pred HHHHHHHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHHHHHHH
Q 022503 157 IGVYDMCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALG 236 (296)
Q Consensus 157 ~~~l~~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~K~~a~~~a~~~~~~~ 236 (296)
+++++.+++|+++|++||+|++++|.+|++++++.++++++|++++++++.+|.+.+....++++|+++++.+.++++.+
T Consensus 259 ~~al~~~~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~~ar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~~~~~~a 338 (383)
T 1buc_A 259 EAALADAVEYSKQRVQFGKPLCKFQSISFKLADMKMQIEAARNLVYKAACKKQEGKPFTVDAAIAKRVASDVAMRVTTEA 338 (383)
T ss_dssp HHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999877777889999999999999999999
Q ss_pred HHHhCCCCCcCcChHHHHhhhcCCcccccchHHHHHHHHHHHHhc
Q 022503 237 RELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITG 281 (296)
Q Consensus 237 ~~~~G~~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~~~~~~l~ 281 (296)
+|++||.||+++++++|+|||++...+++|++++++..+++.++|
T Consensus 339 ~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 383 (383)
T 1buc_A 339 VQIFGGYGYSEEYPVARHMRDAKITQIYEGTNEVQLMVTGGALLR 383 (383)
T ss_dssp HHHHGGGGGSTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHTC
T ss_pred HHhcCCeecCCCChHHHHHHHhhcccccCCHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999875
No 15
>1siq_A GCD, glutaryl-COA dehydrogenase; acyl-COA dehydrogenase, decarboxylation, flavin protein, oxidoreductase; HET: FAD; 2.10A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 2r0n_A* 1sir_A* 2r0m_A*
Probab=100.00 E-value=2.4e-57 Score=410.93 Aligned_cols=284 Identities=37% Similarity=0.533 Sum_probs=270.1
Q ss_pred hhhhcCCHHHHHHHhHhhhccccceeEEecCCCCCCCcCCCeeEEEEE--CCEEEEEeEEEeecCCCCCCEEEEEEEeCC
Q 022503 3 TIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKV--EGGWILEGQKRWIGNSTFADVLVVMARNTT 80 (296)
Q Consensus 3 ~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~gs~~~~~~~~a~~~--~~g~~l~G~K~~vt~~~~a~~~lv~a~~~~ 80 (296)
+|..+|+++||++|||++++|+.++++++|||+.|||...+.|+|+++ +|||+|||.|.|+||+..||+++|++++++
T Consensus 105 ~l~~~g~~~q~~~~l~~l~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~a~~~~ 184 (392)
T 1siq_A 105 PIYAYGSEEQRQKYLPQLAKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARCED 184 (392)
T ss_dssp HHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEEEEEEEEETGGGCSEEEEEEEETT
T ss_pred HHHHhCCHHHHHHHHHHHhCCCeEEEEEECCCCCCcCccccEEEEEEeCCCCEEEEEEEEEeecCCcccCEEEEEEEECC
Confidence 577899999999999999999999999999999999999999999999 999999999999999999999999999864
Q ss_pred CCCeEEEEEeCCCCCeEEeecccccccccccccceEeeeeeeCCCCCCCCCCChHHhhhhhhHHHHHHHHHHHHHHHHHH
Q 022503 81 TKKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPDEDRLPGFNSFQDTNIPLSVARVMVAWQTIGISIGVY 160 (296)
Q Consensus 81 ~~~~~~flv~~~~~Gv~~~~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~~~~~~~~~~~~~~~~r~~~aa~~~G~~~~~l 160 (296)
+++++|+||++.|||++.+.|+++|+++++++++.||||+||++++++...++......+...|+.+++.++|++++++
T Consensus 185 -g~~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al 263 (392)
T 1siq_A 185 -GCIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVPEENVLPGASSLGGPFGCLNNARYGIAWGVLGASEFCL 263 (392)
T ss_dssp -SCEEEEEEETTCTTEECCBCCCCSSSTTSCEEEEEEEEEEEEGGGBCTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCEEEEEEeCCCCCeEeccccccccccCCceEEEEEccEEECHHHcCCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4589999999999999999999999999999999999999999999987777777677788899999999999999999
Q ss_pred HHHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHHHHHHHHHHh
Q 022503 161 DMCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGRELL 240 (296)
Q Consensus 161 ~~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~K~~a~~~a~~~~~~~~~~~ 240 (296)
+.+++|+++|++||+|++++|.+|+++++|.+++++++++++++++.+|.+.+....++++|+++++.+.++++.++|++
T Consensus 264 ~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~~ar~~~~~aa~~~d~~~~~~~~~~~aK~~~~~~a~~v~~~a~q~~ 343 (392)
T 1siq_A 264 HTARQYALDRMQFGVPLARNQLIQKKLADMLTEITLGLHACLQLGRLKDQDKAAPEMVSLLKRNNCGKALDIARQARDML 343 (392)
T ss_dssp HHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999998777777889999999999999999999999
Q ss_pred CCCCCcCcChHHHHhhhcCCcccccchHHHHHHHHHHHHhcCcCCCC
Q 022503 241 GGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITGFASFKP 287 (296)
Q Consensus 241 G~~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~ 287 (296)
||.||+++++++|+|||++...+++|++++++..+++.++|+|++..
T Consensus 344 Gg~g~~~~~~l~r~~Rd~~~~~~~~G~~~~~~~~i~~~llgl~~~~~ 390 (392)
T 1siq_A 344 GGNGISDEYHVIRHAMNLEAVNTYEGTHDIHALILGRAITGIQAFTA 390 (392)
T ss_dssp GGGGGSGGGSHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHSCCCSCC
T ss_pred CCccccCCCcHHHHHhhCcCCeeecCcHHHHHHHHHHHHhCcccccc
Confidence 99999999999999999999999999999999999999999987643
No 16
>3nf4_A Acyl-COA dehydrogenase; seattle structural genomics center for infectious disease, S FAD, FADH, tuberculosis, oxidoredu; HET: FAD; 2.35A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=1.7e-57 Score=411.34 Aligned_cols=280 Identities=26% Similarity=0.411 Sum_probs=260.4
Q ss_pred hhhhhcCCHHHHHHHhHhhhccccceeEEecCCCCCCCcCCCeeEEEEECCEEEEEeEEEeecCCCCCCEEEEEEEeC-C
Q 022503 2 LTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNSTFADVLVVMARNT-T 80 (296)
Q Consensus 2 ~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~gs~~~~~~~~a~~~~~g~~l~G~K~~vt~~~~a~~~lv~a~~~-~ 80 (296)
.+|..+|+++||++|||++++|+.++++++|||++|||...+.|+|++++|||+|||.|.|+|++..||+++|+++++ +
T Consensus 106 ~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~ 185 (387)
T 3nf4_A 106 HPLLVFGTEEQKKRWLPGMLSGEQIGAYSLSEPQAGSDAAALRCAATPTDGGYVINGSKSWITHGGKADFYTLFARTGEG 185 (387)
T ss_dssp HHHHHHSCHHHHHHHHHHHTTSSCCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEECC--
T ss_pred HHHHHhCCHHHHHHHHHHHhCCCeeEEEEEcCCCCCCChhhCEEEEEEeCCEEEEEeEEecccCCcccCEEEEEEEeCCC
Confidence 467889999999999999999999999999999999999999999999999999999999999999999999999986 3
Q ss_pred CCCeEEEEEeCCCCCeEEeecccccccccccccceEeeeeeeCCCCCCCCC-CChHHhhhhhhHHHHHHHHHHHHHHHHH
Q 022503 81 TKKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPDEDRLPGF-NSFQDTNIPLSVARVMVAWQTIGISIGV 159 (296)
Q Consensus 81 ~~~~~~flv~~~~~Gv~~~~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~~~-~~~~~~~~~~~~~r~~~aa~~~G~~~~~ 159 (296)
.+++++|+||.+.|||++.+.|+++|+++++++++.||||+||+++++|.. .++......+...|+.+++.++|+++++
T Consensus 186 ~~g~~~flV~~~~pGv~~~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~a 265 (387)
T 3nf4_A 186 SRGVSCFLVPADQPGLSFGKPEEKMGLHAVPTTSAFYDNARIDADRRIGEEGQGLQIAFSALDSGRLGIAAVATGLAQAA 265 (387)
T ss_dssp CCCEEEEEEETTCTTEEECCCCCBSSCCSSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEECCCCCeEecCcccccccCCCCeeEEEEeeEEecHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 367999999999999999999999999999999999999999999999876 5678888889999999999999999999
Q ss_pred HHHHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 022503 160 YDMCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGREL 239 (296)
Q Consensus 160 l~~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~K~~a~~~a~~~~~~~~~~ 239 (296)
++.+++|+++|++||+|++++|.+|++++++.++++++|++++++++.+|.+.+....++++|+++++.+.++++.++|+
T Consensus 266 l~~a~~~a~~R~~fg~~i~~~q~v~~~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~~aK~~a~~~a~~~~~~a~q~ 345 (387)
T 3nf4_A 266 LDEAVAYANERTAFGRKIIDHQGLGFLLADMAAAVATARATYLDAARRRDQGRPYSQQASIAKLTATDAAMKVTTDAVQV 345 (387)
T ss_dssp HHHHHHHHHC------CTTTC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCeeCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999987778889999999999999999999999
Q ss_pred hCCCCCcCcChHHHHhhhcCCcccccchHHHHHHHHHHHHhc
Q 022503 240 LGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITG 281 (296)
Q Consensus 240 ~G~~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~~~~~~l~ 281 (296)
|||.||+++++++|+|||++...+++|++++++..|++.+++
T Consensus 346 ~Gg~G~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~l~~ 387 (387)
T 3nf4_A 346 FGGVGYTRDYRVERYMREAKIMQIFEGTNQIQRLVIARGLTR 387 (387)
T ss_dssp HGGGGGBTTSSHHHHHHHHHHHTTSSSCHHHHHHHHHHTTC-
T ss_pred hCcHhhcCCCcHHHHHhHhhcCeeecChHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999998764
No 17
>4hr3_A Putative acyl-COA dehydrogenase; ssgcid, seattle structural genomics center for infectious DI niaid; HET: FAD; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=1.3e-57 Score=415.57 Aligned_cols=281 Identities=21% Similarity=0.327 Sum_probs=267.1
Q ss_pred hhhhhcCCHHHHHHHhHhhhccccceeEEecCCC-CCCCcCCCeeEEEEECCEEEEEeEEEeecCCCC--CCEEEEEEEe
Q 022503 2 LTIATSGSEAQKRKYLPSLAQLTTMASWALTEPN-HGSDASALSTAATKVEGGWILEGQKRWIGNSTF--ADVLVVMARN 78 (296)
Q Consensus 2 ~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~-~gs~~~~~~~~a~~~~~g~~l~G~K~~vt~~~~--a~~~lv~a~~ 78 (296)
.+|..+|+++||++|||++++|+.++++++|||+ +|||...+.|+|++++|||+|||.|.|+||+.+ ||+++|++++
T Consensus 119 ~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~~gsd~~~~~t~A~~~g~g~~lnG~K~~is~a~~~~Ad~~~v~a~~ 198 (415)
T 4hr3_A 119 EVLHRYGSQEQKEVWLEPLLEGDIRSAFCMTEPDVASSDATNMAATAVVEGDEVVINGRKWWSTGVGHPDCKVIIFMGLT 198 (415)
T ss_dssp HHHHHHCCHHHHHHTHHHHHTTSCEEEEECCCTTSCTTSGGGCCCEEEEETTEEEEEEEEEEEETTTSTTEEEEEEEEEC
T ss_pred HHHHHhCCHHHHHHHHHHHhCCCceeEEEEcCCCCCCCchhhCeeEEEEECCEEEEeeEEeeECCCCCCCCCEEEEEEEe
Confidence 4688999999999999999999999999999999 999999999999999999999999999999966 9999999998
Q ss_pred CCC----CCeEEEEEeCCCCCeEEeeccccccccccc--ccceEeeeeeeCCCCCCCCC-CChHHhhhhhhHHHHHHHHH
Q 022503 79 TTT----KKINAFIVKKDAPGLTATKIENKIGLRMLQ--NGDILFKKVFVPDEDRLPGF-NSFQDTNIPLSVARVMVAWQ 151 (296)
Q Consensus 79 ~~~----~~~~~flv~~~~~Gv~~~~~~~~~g~~~~~--~~~~~f~~v~Vp~~~~l~~~-~~~~~~~~~~~~~r~~~aa~ 151 (296)
+++ +++++|+||++.|||++.+.|+++|+++++ +++++|+||+||++++||.+ .++......+...|+.+++.
T Consensus 199 ~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~g~r~~~~~~~~v~fddv~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~ 278 (415)
T 4hr3_A 199 DPNAHRYARHSMVLVPMDTPGITVERMLPTMGFYDEPGGHGVVSFDNVRLPADAFIAGPGKGFEIAQGRLGPGRVHHAMR 278 (415)
T ss_dssp CTTSCTTSSEEEEEEETTSTTEEEEEECCBTTBCCTTTCEEEEEEEEEEEEGGGBSSCTTCHHHHHHHHCSHHHHHHHHH
T ss_pred CCCCCCCCceEEEEEEcCCCceEecCCCCccccCCCCCCeeEEEEccEEECHHHcCCCCCchHHHHHHHHhHHHHHHHHH
Confidence 643 579999999999999999999999999987 99999999999999999876 57788888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCChhHHHHHHHHHHHHH
Q 022503 152 TIGISIGVYDMCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCEN--GKMSLGQASLGKAWVSARA 229 (296)
Q Consensus 152 ~~G~~~~~l~~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~--~~~~~~~~~~~K~~a~~~a 229 (296)
++|+++++++.+++|+++|++||+|++++|.+|++|++|.++++++|++++++++.+|. +.+....++++|+++++.+
T Consensus 279 ~~G~a~~al~~a~~~a~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~~aK~~a~e~a 358 (415)
T 4hr3_A 279 LIGLAEVALEHACRRGLDRTAFGKPLVNLGGNRERIADARIAINQTRLLVLHAAWLLDTVGIMGALSAVSEIKVAAPNMA 358 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHCEETTEEGGGSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCccCCCcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999987 4456778999999999999
Q ss_pred HHHHHHHHHHhCCCCCcCcChHHHHhhhcCCcccccchHHHHHHHHHHHHhcC
Q 022503 230 RETVALGRELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITGF 282 (296)
Q Consensus 230 ~~~~~~~~~~~G~~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~~~~~~l~~ 282 (296)
.++++.++|++||.||+++++++|+|||++...+++|++++++..+++.++|.
T Consensus 359 ~~v~~~a~qi~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~~l~~ 411 (415)
T 4hr3_A 359 QQVIDMAIQIHGGGGLSNDFPLAAAWVNARALRLADGPDEVHRGVVARIELAK 411 (415)
T ss_dssp HHHHHHHHHHTGGGGGSSSSSHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCccccCCCchHHHHHHHhhhheeecCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999984
No 18
>2vig_A Short-chain specific acyl-COA dehydrogenase,; fatty acid metabolism, FAD, polymorphism, flavoprotein, mitochondrion, disease mutation; HET: FAD COS; 1.9A {Homo sapiens} PDB: 1jqi_A*
Probab=100.00 E-value=3.4e-57 Score=409.76 Aligned_cols=282 Identities=31% Similarity=0.456 Sum_probs=267.7
Q ss_pred hhhhhcCCHHHHHHHhHhhhccccceeEEecCCCCCCCcCCCeeEEEEECCEEEEEeEEEeecCCCCCCEEEEEEEeCCC
Q 022503 2 LTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNSTFADVLVVMARNTTT 81 (296)
Q Consensus 2 ~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~gs~~~~~~~~a~~~~~g~~l~G~K~~vt~~~~a~~~lv~a~~~~~ 81 (296)
.+|..+|+++||++|||++++|+.++++++|||++|||...+.|+|++++|||+|||.|.|+||+..||+++|+++++++
T Consensus 97 ~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~ 176 (391)
T 2vig_A 97 GPILKFGSKEQKQAWVTPFTSGDKIGCFALSEPGNGSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFASTDRA 176 (391)
T ss_dssp HHHHHHCCHHHHHHHTGGGSSSSCCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEECCSS
T ss_pred HHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCCCcccceeEEEEeCCEEEEeeEEEeecCCCcCCEEEEEEEeCCC
Confidence 35778999999999999999999999999999999999999999999999999999999999999999999999998632
Q ss_pred ---CCeEEEEEeCCCCCeEEeecccccccccccccceEeeeeeeCCCCCCCCC-CChHHhhhhhhHHHHHHHHHHHHHHH
Q 022503 82 ---KKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPDEDRLPGF-NSFQDTNIPLSVARVMVAWQTIGISI 157 (296)
Q Consensus 82 ---~~~~~flv~~~~~Gv~~~~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~~~-~~~~~~~~~~~~~r~~~aa~~~G~~~ 157 (296)
+++++|+||++.|||++.+.|+++|+++++++++.||||+||+++++|.+ .++......+...|+.+++.++|+++
T Consensus 177 ~~~~g~~~flV~~~~pGv~v~~~~~~~g~r~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~ 256 (391)
T 2vig_A 177 LQNKSISAFLVPMPTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGEPGMGFKIAMQTLDMGRIGIASQALGIAQ 256 (391)
T ss_dssp STTSCEEEEEEESSCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTBHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEEeCCCCCeEecCccccccCCCCCeeEEEECcEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37899999999999999999999999999999999999999999999876 56777778888999999999999999
Q ss_pred HHHHHHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 022503 158 GVYDMCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGR 237 (296)
Q Consensus 158 ~~l~~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~K~~a~~~a~~~~~~~~ 237 (296)
++++.+++|+++|++||+|++++|.+|++|+++.++++++|++++++++.+|.+.+....++++|+++++.+.++++.++
T Consensus 257 ~al~~a~~ya~~R~~fg~~i~~~q~v~~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~~~~~~a~ 336 (391)
T 2vig_A 257 TALDCAVNYAENRMAFGAPLTKLQVIQFKLADMALALESARLLTWRAAMLKDNKKPFIKEAAMAKLAASEAATAISHQAI 336 (391)
T ss_dssp HHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998776677899999999999999999999
Q ss_pred HHhCCCCCcCcChHHHHhhhcCCcccccchHHHHHHHHHHHHhcCc
Q 022503 238 ELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITGFA 283 (296)
Q Consensus 238 ~~~G~~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~~~~~~l~~~ 283 (296)
|++||.||+++++++|+|||++...+++|++++++..+++.+++..
T Consensus 337 q~~Gg~g~~~~~~~~r~~Rda~~~~i~~G~~~~~~~~ia~~~l~~~ 382 (391)
T 2vig_A 337 QILGGMGYVTEMPAERHYRDARITEIYEGTSEIQRLVIAGHLLRSY 382 (391)
T ss_dssp HHHGGGGGBTTSSHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHHH
T ss_pred HhhCCeEecCCChHHHHHHHhhcceeecCHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999998753
No 19
>2pg0_A Acyl-COA dehydrogenase; GK1316, geobacillus kaustophilus HTA structural genomics, PSI, protein structure initiative; HET: FAD; 1.80A {Geobacillus kaustophilus}
Probab=100.00 E-value=6.2e-57 Score=407.36 Aligned_cols=278 Identities=27% Similarity=0.419 Sum_probs=264.5
Q ss_pred hhhhhcCCHHHHHHHhHhhhccccceeEEecCCCCCCCcCCCeeEEEEECCEEEEEeEEEeecCCCCCCEEEEEEEeCCC
Q 022503 2 LTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNSTFADVLVVMARNTTT 81 (296)
Q Consensus 2 ~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~gs~~~~~~~~a~~~~~g~~l~G~K~~vt~~~~a~~~lv~a~~~~~ 81 (296)
.+|..+|+++||++|||++++|+.++++++|||++|||...+.|+|++++|||+|||+|.|+|++..||+++|+++++++
T Consensus 100 ~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~ 179 (385)
T 2pg0_A 100 PYIASYGTEEQKQKWLPKCVTGELITAIAMTEPGAGSDLANISTTAVKDGDYYIVNGQKTFITNGIHADLIVVACKTDPQ 179 (385)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEETTTTTCSEEEEEEESCTT
T ss_pred HHHHHhCCHHHHHHHHHHHhCCCeEEEEEeCCCCCCcCHhhCeEEEEEcCCEEEEEeEEecccCCcccCEEEEEEEeCCc
Confidence 35778999999999999999999999999999999999999999999999999999999999999999999999998633
Q ss_pred -----CCeEEEEEeCCCCCeEEeecccccccccccccceEeeeeeeCCCCCCCCC-CChHHhhhhhhHHHHHHHHHHHHH
Q 022503 82 -----KKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPDEDRLPGF-NSFQDTNIPLSVARVMVAWQTIGI 155 (296)
Q Consensus 82 -----~~~~~flv~~~~~Gv~~~~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~~~-~~~~~~~~~~~~~r~~~aa~~~G~ 155 (296)
.++++|+||++.|||++.+.|+++|+++++++++.||||+||++++||.+ .++......+...|+.+++.++|+
T Consensus 180 ~~~~~~g~~~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~ 259 (385)
T 2pg0_A 180 AKPPHRGISLLVVERDTPGFTRGRKLEKVGLHAQDTAELFFQDAKVPAYNLLGEEGKGFYYLMEKLQQERLVVAIAAQTA 259 (385)
T ss_dssp CSSGGGGEEEEEEETTCTTEEECCCCCBSSCTTSCCEEEEEEEEEEEGGGEESCTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCceEEEEEeCCCCCeEecCCccccccCCCceEEEEEcceEEcHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 26899999999999999999999999999999999999999999999876 567777788889999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHHHHHH
Q 022503 156 SIGVYDMCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVAL 235 (296)
Q Consensus 156 ~~~~l~~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~K~~a~~~a~~~~~~ 235 (296)
++++++.+++|+++|++||+|++++|.+|++++++.++++++|++++++++.+|.+.+....++++|+++++.+.++++.
T Consensus 260 a~~al~~a~~ya~~R~~fg~~i~~~q~v~~~la~~~~~~~aar~~~~~aa~~~d~g~~~~~~~~~aK~~a~e~a~~~~~~ 339 (385)
T 2pg0_A 260 AEVMFSLTKQYVKQRTAFGKRVSEFQTVQFRLAEMATEIALGRTFVDRVIEEHMAGKQIVTEVSMAKWWITEMAKRVAAE 339 (385)
T ss_dssp HHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCccCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988777788999999999999999999
Q ss_pred HHHHhCCCCCcCcChHHHHhhhcCCcccccchHHHHHHHHHHHH
Q 022503 236 GRELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREI 279 (296)
Q Consensus 236 ~~~~~G~~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~~~~~~ 279 (296)
++|++||.||+++++++|+|||++...+++|++++++..+++.+
T Consensus 340 a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~l 383 (385)
T 2pg0_A 340 AMQLHGGYGYMEEYEIARRYRDIPVSAIYAGTNEMMKTIIARQL 383 (385)
T ss_dssp HHHHTGGGGGBTTSHHHHHHHHGGGGGTTTSCHHHHHHHHHHHT
T ss_pred HHHHhCccccCCCCcHHHHHhhhcCceeecCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999864
No 20
>1ivh_A Isovaleryl-COA dehydrogenase; oxidoreductase, acyl-COA dehydrogenase, flavoprotein, isovaleric acidemia; HET: FAD COS; 2.60A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=2.2e-57 Score=411.35 Aligned_cols=281 Identities=29% Similarity=0.480 Sum_probs=267.4
Q ss_pred hhhhhcCCHHHHHHHhHhhhccccceeEEecCCCCCCCcCCCeeEEEEECCEEEEEeEEEeecCCCCCCEEEEEEEeCCC
Q 022503 2 LTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNSTFADVLVVMARNTTT 81 (296)
Q Consensus 2 ~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~gs~~~~~~~~a~~~~~g~~l~G~K~~vt~~~~a~~~lv~a~~~~~ 81 (296)
.+|..+|+++||++|||++.+|+.++++++|||+.|||...+.|+|++++|||+|||.|.|+||+..||+++|+++++++
T Consensus 106 ~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~vs~~~~Ad~~~v~ar~~~~ 185 (394)
T 1ivh_A 106 NQLVRNGNEAQKEKYLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYAKTDLA 185 (394)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECSSEEEEEEEEEEEETGGGCSEEEEEEESCTT
T ss_pred HHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCcCcccceEEEEEcCCEEEEEeEEEeeCCCCcCCEEEEEEEeCCc
Confidence 35778999999999999999999999999999999999999999999999999999999999999999999999998643
Q ss_pred -----CCeEEEEEeCCCCCeEEeecccccccccccccceEeeeeeeCCCCCCCCC-CChHHhhhhhhHHHHHHHHHHHHH
Q 022503 82 -----KKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPDEDRLPGF-NSFQDTNIPLSVARVMVAWQTIGI 155 (296)
Q Consensus 82 -----~~~~~flv~~~~~Gv~~~~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~~~-~~~~~~~~~~~~~r~~~aa~~~G~ 155 (296)
+++++|+||++.|||++.+.|+++|+++++++++.||||+||+++++|.+ .++......+...|+.+++.++|+
T Consensus 186 ~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~ 265 (394)
T 1ivh_A 186 AVPASRGITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERLVLAGGPLGL 265 (394)
T ss_dssp CSSGGGGEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESCTTCHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred ccCCCCCeEEEEEeCCCCCeEeccccccccCCCCCeeEEEECcEEEcHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999999999999999999876 567777788889999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHHHHHH
Q 022503 156 SIGVYDMCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVAL 235 (296)
Q Consensus 156 ~~~~l~~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~K~~a~~~a~~~~~~ 235 (296)
++++++.+++|+++|++||+|++++|.+|++++++.++++++|++++++++.+|.+.+....++++|+++++.+.++++.
T Consensus 266 a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~~~~~~ 345 (394)
T 1ivh_A 266 MQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVILYSAECATQVALD 345 (394)
T ss_dssp HHHHHHHHHHHHTTCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCeeCCcchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999987777778999999999999999999
Q ss_pred HHHHhCCCCCcCcChHHHHhhhcCCcccccchHHHHHHHHHHHHhcC
Q 022503 236 GRELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITGF 282 (296)
Q Consensus 236 ~~~~~G~~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~~~~~~l~~ 282 (296)
++|++||.||+++++++|+|||++...+++|++++++..+++.+++.
T Consensus 346 a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~~Gt~~i~~~~ia~~ll~~ 392 (394)
T 1ivh_A 346 GIQCFGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVIGRAFNAD 392 (394)
T ss_dssp HHHHHGGGGGBTTSTHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHTC
T ss_pred HHHhcCCccccCCchHHHHHHhcccccccCChHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999863
No 21
>2jif_A Short/branched chain specific acyl-COA dehydrogen; mitochondrion, oxidoreductase, transit peptide, fatty acid metabolism, FAD, flavoprotein; HET: FAD COS; 2.0A {Homo sapiens}
Probab=100.00 E-value=5e-57 Score=410.02 Aligned_cols=278 Identities=34% Similarity=0.492 Sum_probs=263.6
Q ss_pred hhhhcCCHHHHHHHhHhhhccccceeEEecCCCCCCCcCCCeeEEEEECCEEEEEeEEEeecCCCCCCEEEEEEEeCCC-
Q 022503 3 TIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNSTFADVLVVMARNTTT- 81 (296)
Q Consensus 3 ~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~gs~~~~~~~~a~~~~~g~~l~G~K~~vt~~~~a~~~lv~a~~~~~- 81 (296)
+|..+|+++||++|||++.+|+ ++++++|||+.|||...+.|+|++++|||+|||.|.|+||+..||+++|+++++++
T Consensus 121 ~l~~~g~~~qk~~~l~~~~~g~-~~~~a~tEp~~Gsd~~~~~t~A~~~g~g~vlnG~K~~is~a~~Ad~~~v~ar~~~~~ 199 (404)
T 2jif_A 121 LIRKHGTEEQKATYLPQLTTEK-VGSFCLSEAGAGSDSFALKTRADKEGDYYVLNGSKMWISSAEHAGLFLVMANVDPTI 199 (404)
T ss_dssp HHHHHCCHHHHHHHHHHHHHTC-CEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEESCGGG
T ss_pred HHHHhCCHHHHHHHHHHHhCCC-cceEEecCCCCCCChhhceeEEEEeCCEEEEEeEEEeecCCcccCEEEEEEEeCCCC
Confidence 5678999999999999999986 78999999999999999999999999999999999999999999999999998532
Q ss_pred --CCeEEEEEeCCCCCeEEeecccccccccccccceEeeeeeeCCCCCCCCC-CChHHhhhhhhHHHHHHHHHHHHHHHH
Q 022503 82 --KKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPDEDRLPGF-NSFQDTNIPLSVARVMVAWQTIGISIG 158 (296)
Q Consensus 82 --~~~~~flv~~~~~Gv~~~~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~~~-~~~~~~~~~~~~~r~~~aa~~~G~~~~ 158 (296)
+++++|+||++.|||++.+.|+++|+++++++++.||||+||++++||.+ .++......+...|+.+++.++|++++
T Consensus 200 ~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~ 279 (404)
T 2jif_A 200 GYKGITSFLVDRDTPGLHIGKPENKLGLRASSTCPLTFENVKVPEANILGQIGHGYKYAIGSLNEGRIGIAAQMLGLAQG 279 (404)
T ss_dssp GGGGEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEecCCCCeEeccCcccccCCCCceEEEEEccEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999876 567777788889999999999999999
Q ss_pred HHHHHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 022503 159 VYDMCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGRE 238 (296)
Q Consensus 159 ~l~~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~K~~a~~~a~~~~~~~~~ 238 (296)
+++.+++|+++|.+||+|++++|.+|+++++|.++++++|++++++++.+|.+.+....++++|+++++.+.++++.++|
T Consensus 280 al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~e~a~~v~~~a~q 359 (404)
T 2jif_A 280 CFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTYNAARLLEAGKPFIKEASMAKYYASEIAGQTTSKCIE 359 (404)
T ss_dssp HHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcccCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988777778999999999999999999999
Q ss_pred HhCCCCCcCcChHHHHhhhcCCcccccchHHHHHHHHHHHHhc
Q 022503 239 LLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITG 281 (296)
Q Consensus 239 ~~G~~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~~~~~~l~ 281 (296)
++||.||+++++++|+|||++...+++|++++++..|++.+++
T Consensus 360 ~~Gg~G~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~~~~ 402 (404)
T 2jif_A 360 WMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQLNTIAKHIDA 402 (404)
T ss_dssp HHGGGGGBTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHH
T ss_pred hcCcceecCCCcHHHHHhhccceeecCCHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999998864
No 22
>3mpi_A Glutaryl-COA dehydrogenase; alpha-beta fold, oxidoreductase; HET: FAD GRA; 2.05A {Desulfococcus multivorans} PDB: 3mpj_A*
Probab=100.00 E-value=4.6e-57 Score=409.82 Aligned_cols=284 Identities=28% Similarity=0.471 Sum_probs=269.2
Q ss_pred hhhhcCCHHHHHHHhHhhhccccceeEEecCCCCCCCcCCCeeEEEEECCEEEEEeEEEeecCCCCCCEEEEEEEeCCC-
Q 022503 3 TIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNSTFADVLVVMARNTTT- 81 (296)
Q Consensus 3 ~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~gs~~~~~~~~a~~~~~g~~l~G~K~~vt~~~~a~~~lv~a~~~~~- 81 (296)
+|..+|+++||++|||.+.+|+.++++++|||+.|||...+.|+|++++|||+|||.|.|+||+..||+++|+++++++
T Consensus 100 ~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~ 179 (397)
T 3mpi_A 100 TILTYGSEALKKKYVPKLSSAEFLGGFGITEPDAGSDVMAMSSTAEDKGDHWLLNGSKTWISNAAQADVLIYYAYTDKAA 179 (397)
T ss_dssp HHHHHSCHHHHHHHHHHHHTTSSCCCEECCBTTBSSCGGGCCCEEEECSSEEEEEEEEEEEETTTTCSSEEEEEESCGGG
T ss_pred HHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccCeEEEEEeCCEEEEEEEEEeeCCCcccCEEEEEEEcCCCC
Confidence 6889999999999999999999999999999999999999999999999999999999999999999999999998642
Q ss_pred --CCeEEEEE-eCCCCCeEEeecccccccccccccceEeeeeeeCCCCCCCCC-CChHHhhhhhhHHHHHHHHHHHHHHH
Q 022503 82 --KKINAFIV-KKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPDEDRLPGF-NSFQDTNIPLSVARVMVAWQTIGISI 157 (296)
Q Consensus 82 --~~~~~flv-~~~~~Gv~~~~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~~~-~~~~~~~~~~~~~r~~~aa~~~G~~~ 157 (296)
+++++|+| |.+.|||++ +.|+++|++++++++++||||+||+++++|.+ .++......+...|+.+++.++|+++
T Consensus 180 ~~~g~~~flV~~~~~~Gv~v-~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~~~g~~~~~~~~~~~r~~~aa~~lG~a~ 258 (397)
T 3mpi_A 180 GSRGLSAFVIEPRNFPGIKT-SNLEKLGSHASPTGELFLDNVKVPKENILGKPGDGARIVFGSLNHTRLSAAAGGVGLAQ 258 (397)
T ss_dssp GGGSEEEEEECTTTSTTEEE-EECCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEEcCCCCCeEe-ccCccccCcCCceeEEEEeeEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47899999 999999999 99999999999999999999999999999876 56777888889999999999999999
Q ss_pred HHHHHHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCChhHHHHHHHHHHHHHHHHHHHH
Q 022503 158 GVYDMCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENG-KMSLGQASLGKAWVSARARETVALG 236 (296)
Q Consensus 158 ~~l~~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~~-~~~~~~~~~~K~~a~~~a~~~~~~~ 236 (296)
++++.+++|+++|++||+|++++|.+|++++++.++++++|++++++++.+|.+ .+....++++|+++++.+.++++.+
T Consensus 259 ~al~~a~~~a~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~~~aK~~a~~~a~~~~~~a 338 (397)
T 3mpi_A 259 ACLDAAIKYCNERRQFGKPIGDFQMNQDMIAQMAVEVEAARLLAYKAAAAKDEGRLNNGLDVAMAKYAAGEAVSKCANYA 338 (397)
T ss_dssp HHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTEEHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCcccCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999987 5667789999999999999999999
Q ss_pred HHHhCCCCCcCcChHHHHhhhcCCcccccchHHHHHHHHH-HHHhcCcCCCCC
Q 022503 237 RELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAA-REITGFASFKPT 288 (296)
Q Consensus 237 ~~~~G~~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~~~-~~~l~~~~~~~~ 288 (296)
+|++||.||+++++++|+|||++...+++|++++++..|+ +.+ |+|+.+.+
T Consensus 339 ~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~~l-gl~~~~~~ 390 (397)
T 3mpi_A 339 MRILGAYGYSTEYPVARFYRDAPTYYMVEGSANICKMIIALDQL-GVRKANRK 390 (397)
T ss_dssp HHHHGGGGGSTTSHHHHHHHHTTHHHHSSSCHHHHHHHHHHHHH-TSSCCEEC
T ss_pred HHHhCCeeecCCCCHHHHHhhccceeeecCHHHHHHHHHHHHhc-CCCccccc
Confidence 9999999999999999999999999999999999999999 666 99876543
No 23
>1rx0_A Acyl-COA dehydrogenase family member 8, mitochondrial; flavoprotein, coenzyme A, oxidoreductase; HET: FAD 2MC; 1.77A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=1.6e-56 Score=405.62 Aligned_cols=280 Identities=28% Similarity=0.403 Sum_probs=264.1
Q ss_pred hhhhhcCCHHHHHHHhHhhhccccceeEEecCCCCCCCcCCCeeEEEEECCEEEEEeEEEeecCCCCCCEEEEEEEeCCC
Q 022503 2 LTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNSTFADVLVVMARNTTT 81 (296)
Q Consensus 2 ~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~gs~~~~~~~~a~~~~~g~~l~G~K~~vt~~~~a~~~lv~a~~~~~ 81 (296)
.+|..+|+++||++|||++++|+.++++++|||+.|||...+.|+|++++|||+|||.|.|+||+..||+++|+++++++
T Consensus 109 ~~l~~~g~~~qk~~~l~~~~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~~~~ 188 (393)
T 1rx0_A 109 WMIDSFGNEEQRHKFCPPLCTMEKFASYCLTEPGSGSDAASLLTSAKKQGDHYILNGSKAFISGAGESDIYVVMCRTGGP 188 (393)
T ss_dssp HHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEESSSS
T ss_pred HHHHHHCCHHHHHHHHHHHhCCCceEEEEecCCCCCcCcccceeEEEEcCCEEEEEeEEEeecCCccCCEEEEEEEcCCC
Confidence 35778999999999999999999999999999999999999999999999999999999999999999999999998643
Q ss_pred --CCeEEEEEeCCCCCeEEeecccccccccccccceEeeeeeeCCCCCCCCC-CChHHhhhhhhHHHHHHHHHHHHHHHH
Q 022503 82 --KKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPDEDRLPGF-NSFQDTNIPLSVARVMVAWQTIGISIG 158 (296)
Q Consensus 82 --~~~~~flv~~~~~Gv~~~~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~~~-~~~~~~~~~~~~~r~~~aa~~~G~~~~ 158 (296)
+++++|+||.+.|||++.+.++++|++++++++++||||+||+++++|.. .++......+...|+.+++.++|++++
T Consensus 189 ~~~g~~~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~ 268 (393)
T 1rx0_A 189 GPKGISCIVVEKGTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGSEGQGFLIAVRGLNGGRINIASCSLGAAHA 268 (393)
T ss_dssp SGGGEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEeCCCCCeEecCcccccccCCCCceEEEEcCeEeCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999999999999999999875 567777777888999999999999999
Q ss_pred HHHHHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-ChhHHHHHHHHHHHHHHHHHHHHH
Q 022503 159 VYDMCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKM-SLGQASLGKAWVSARARETVALGR 237 (296)
Q Consensus 159 ~l~~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~~~~-~~~~~~~~K~~a~~~a~~~~~~~~ 237 (296)
+++.+++|+++|.+||+|++++|.+|+++++|.++++++|++++++++.+|.+.+ ....++++|+++++.+.++++.++
T Consensus 269 al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~aK~~a~~~a~~v~~~a~ 348 (393)
T 1rx0_A 269 SVILTRDHLNVRKQFGEPLASNQYLQFTLADMATRLVAARLMVRNAAVALQEERKDAVALCSMAKLFATDECFAICNQAL 348 (393)
T ss_dssp HHHHHHHHHHHCEETTEEGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCccCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998643 356789999999999999999999
Q ss_pred HHhCCCCCcCcChHHHHhhhcCCcccccchHHHHHHHHHHHHhc
Q 022503 238 ELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITG 281 (296)
Q Consensus 238 ~~~G~~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~~~~~~l~ 281 (296)
|++||.||+++++++|+|||++...+++|++++++..+++.+++
T Consensus 349 q~~Gg~g~~~~~~l~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 392 (393)
T 1rx0_A 349 QMHGGYGYLKDYAVQQYVRDSRVHQILEGSNEVMRILISRSLLQ 392 (393)
T ss_dssp HHTGGGGGBTTSTHHHHHHHHHHTTTSSSCHHHHHHHHHHHHHH
T ss_pred HhcCCeeecCCChHHHHHHhccCceecCChHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999875
No 24
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=100.00 E-value=1.4e-56 Score=423.08 Aligned_cols=279 Identities=31% Similarity=0.451 Sum_probs=263.2
Q ss_pred hhhhcCCHHHHHHHhHhhhccccceeEEecCCCCCCCcCCCeeEEEEE--CCEEEEEeEEEeecCCCCCCEEEEEEEeCC
Q 022503 3 TIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKV--EGGWILEGQKRWIGNSTFADVLVVMARNTT 80 (296)
Q Consensus 3 ~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~gs~~~~~~~~a~~~--~~g~~l~G~K~~vt~~~~a~~~lv~a~~~~ 80 (296)
+|..+|+++||++|||++++|++++++++|||++|||...+.|+|+++ +++|+|||.|.|+||+..||+++|++++++
T Consensus 125 ~l~~~Gt~eQk~~~Lp~la~Ge~~~a~alTEp~aGSD~~~~~T~A~~~~dG~~yvLnG~K~~is~a~~Ad~~lV~Art~~ 204 (597)
T 3owa_A 125 PIVLFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDG 204 (597)
T ss_dssp HHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECTTSSEEEEEEEEEEEETTTTCSEEEEEEEETT
T ss_pred HHHHcCCHHHHHHHHHHHhCCCcceeeEecCCCCCCCcccceeEEEEeCCCCEEEEeeEEEEeCCCccCCEEEEEEEeCC
Confidence 577899999999999999999999999999999999999999999985 456999999999999999999999999864
Q ss_pred CCCeEEEEEeCCCCCeEEeecccccccccccccceEeeeeeeCCCCCCCCC-CChHHhhhhhhHHHHHHHHHHHHHHHHH
Q 022503 81 TKKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPDEDRLPGF-NSFQDTNIPLSVARVMVAWQTIGISIGV 159 (296)
Q Consensus 81 ~~~~~~flv~~~~~Gv~~~~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~~~-~~~~~~~~~~~~~r~~~aa~~~G~~~~~ 159 (296)
+++++|+||++.|||++.+.|+++|+++++++++.|+||+||++++||.. .++......+..+|+.+++.++|+++++
T Consensus 205 -~g~s~flV~~~~pGv~v~~~~~~~Glrgs~t~~v~fddV~VP~~~lLG~~g~G~~~~~~~l~~~R~~~aa~~lG~a~~a 283 (597)
T 3owa_A 205 -EHFSAFIVEKDYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNILNIGRYKLGVGTVGSAKRA 283 (597)
T ss_dssp -TEEEEEEEETTSTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CceEEEEEeCCCCCeEEecccccccCCCCCceEEEEeceeecHHHhcCcccchHHHHHHhhHhHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999876 5778888899999999999999999999
Q ss_pred HHHHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-------------------CChhHHHH
Q 022503 160 YDMCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGK-------------------MSLGQASL 220 (296)
Q Consensus 160 l~~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~~~-------------------~~~~~~~~ 220 (296)
++.+++|+++|.+||+|++++|.+|+++++|.++++++|++++++++.+|.+. +....+++
T Consensus 284 l~~a~~ya~~R~qfG~pi~~~q~vq~~LA~m~~~~~aar~l~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 363 (597)
T 3owa_A 284 VEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSL 363 (597)
T ss_dssp HHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHCHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHhCeeCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccchhhhhhhhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888642 23456899
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCcCcChHHHHhhhcCCcccccchHHHHHHHHHHHHhcC
Q 022503 221 GKAWVSARARETVALGRELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITGF 282 (296)
Q Consensus 221 ~K~~a~~~a~~~~~~~~~~~G~~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~~~~~~l~~ 282 (296)
+|+++++.+.++++.++|+|||+||+++++++|+|||++...+++|++++++..+++.+++.
T Consensus 364 aK~~ase~a~~v~~~a~qi~GG~G~~~e~~ler~~RDar~~~i~eGt~ei~r~~Ia~~ll~~ 425 (597)
T 3owa_A 364 NKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRK 425 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGGGBTTSHHHHHHHHHGGGGTSSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhCCccccccChHHHHHHHhhhhheeCcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998875
No 25
>2wbi_A Acyl-COA dehydrogenase family member 11; human, phosphoprotein, oxidoreducta; HET: FAD; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.4e-56 Score=408.58 Aligned_cols=280 Identities=19% Similarity=0.300 Sum_probs=263.5
Q ss_pred hhhhcCCHHHHHHHhHhhhccccceeEEecCCC-CCCCcCCCeeEEEEECCEEEEEeEEEeecCCCC--CCEEEEEEEeC
Q 022503 3 TIATSGSEAQKRKYLPSLAQLTTMASWALTEPN-HGSDASALSTAATKVEGGWILEGQKRWIGNSTF--ADVLVVMARNT 79 (296)
Q Consensus 3 ~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~-~gs~~~~~~~~a~~~~~g~~l~G~K~~vt~~~~--a~~~lv~a~~~ 79 (296)
+|..+|+++||++|||++++|+.++++++|||+ +|||...+.|+|++++|||+|||.|.|+||+.. ||+++|+++++
T Consensus 126 ~l~~~g~~~qk~~~l~~l~~G~~~~~~a~tEp~~aGsd~~~~~t~A~~~~~g~~lnG~K~~is~a~~~~Ad~~~v~art~ 205 (428)
T 2wbi_A 126 VLHLYGSEEQKKQWLEPLLQGNITSCFCMTEPDVASSDATNIECSIQRDEDSYVINGKKWWSSGAGNPKCKIAIVLGRTQ 205 (428)
T ss_dssp HHHHHCCHHHHHHTHHHHHHTSSEEEEECCCTTSCTTSGGGCCCEEEEETTEEEEEEEEEEEETTTSTTEEEEEEEEECC
T ss_pred HHHHhCCHHHHHHHHHHHhCCCeEEEEEEecCCcCCCCcccceEEEEEeCCEEEEEeEEeccCCCCCCcCCEEEEEEEeC
Confidence 577899999999999999999999999999999 899999999999999999999999999999987 99999999986
Q ss_pred CC-----CCeEEEEEeCCCCCeEEeeccccccccccc---ccceEeeeeeeCCCCCCCCC-CChHHhhhhhhHHHHHHHH
Q 022503 80 TT-----KKINAFIVKKDAPGLTATKIENKIGLRMLQ---NGDILFKKVFVPDEDRLPGF-NSFQDTNIPLSVARVMVAW 150 (296)
Q Consensus 80 ~~-----~~~~~flv~~~~~Gv~~~~~~~~~g~~~~~---~~~~~f~~v~Vp~~~~l~~~-~~~~~~~~~~~~~r~~~aa 150 (296)
++ +++++|+||.+.|||++.+.|+++|+++++ ++++.||||+||++++||.. .++......+...|+.+++
T Consensus 206 ~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~~~~v~fddv~VP~~~~lg~~g~g~~~~~~~l~~~r~~~aa 285 (428)
T 2wbi_A 206 NTSLSRHKQHSMILVPMNTPGVKIIRPLSVFGYTDNFHGGHFEIHFNQVRVPATNLILGEGRGFEISQGRLGPGRIHHCM 285 (428)
T ss_dssp CTTSCGGGCEEEEEEETTSTTEEEEEECCBTTBCCGGGCCEEEEEEEEEEEEGGGBCSCTTCHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCCceEEEEEECCCCcEEecCCCCccccCCCCCCCeEEEEeCceEECHHHhcCCccchHHHHHHHHHhHHHHHHH
Confidence 43 368999999999999999999999999995 89999999999999999876 5677777888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc-C-CCChhHHHHHHHHHHHH
Q 022503 151 QTIGISIGVYDMCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCEN-G-KMSLGQASLGKAWVSAR 228 (296)
Q Consensus 151 ~~~G~~~~~l~~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~-~-~~~~~~~~~~K~~a~~~ 228 (296)
.++|+++++++.+++|+++|++||+|++++|.+|+++++|.++++++|++++++++.+|. + .+....++++|+++++.
T Consensus 286 ~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~g~~~~~~~~~~aK~~a~e~ 365 (428)
T 2wbi_A 286 RTVGLAERALQIMCERATQRIAFKKKLYAHEVVAHWIAESRIAIEKIRLLTLKAAHSMDTLGSAGAKKEIAMIKVAAPRA 365 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhCcccCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999886 2 34566789999999999
Q ss_pred HHHHHHHHHHHhCCCCCcCcChHHHHhhhcCCcccccchHHHHHHHHHHHHhcC
Q 022503 229 ARETVALGRELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITGF 282 (296)
Q Consensus 229 a~~~~~~~~~~~G~~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~~~~~~l~~ 282 (296)
+.++++.++|+|||.||+++++++|+|||++...+++|++++++..+++.+++.
T Consensus 366 a~~v~~~a~q~~Gg~G~~~~~~~~r~~Rda~~~~i~~G~~~~~~~~ia~~~l~~ 419 (428)
T 2wbi_A 366 VSKIVDWAIQVCGGAGVSQDYPLANMYAITRVLRLADGPDEVHLSAIATMELRD 419 (428)
T ss_dssp HHHHHHHHHHHTGGGGGSTTSSHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCcccCCCCcHHHHHHHHhhcEecCChHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999875
No 26
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=4.2e-56 Score=419.79 Aligned_cols=281 Identities=31% Similarity=0.445 Sum_probs=263.9
Q ss_pred hhhhhcCCHHHHHHHhHhhhccccceeEEecCCCCCCCcCCCeeEEEEE--CCEEEEEeEEEeecCCCCCCEEEEEEEeC
Q 022503 2 LTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKV--EGGWILEGQKRWIGNSTFADVLVVMARNT 79 (296)
Q Consensus 2 ~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~gs~~~~~~~~a~~~--~~g~~l~G~K~~vt~~~~a~~~lv~a~~~ 79 (296)
.+|..+||++||++|||++++|++++++++|||++|||...+.|+|+++ +++|+|||.|.|+||++.||+++|+++++
T Consensus 119 ~~l~~~Gt~eQk~~~Lp~l~~G~~~~a~alTEp~aGSD~~~~~t~A~~~~dG~~~vLnG~K~~it~a~~Ad~~~V~Ar~~ 198 (577)
T 2z1q_A 119 LPLVYFGTEEQKRKYLPKLASGEWIAAYCLTEPGSGSDALAAKTRATLSEDGKHYILNGVKQWISNAGFAHLFTVFAKVD 198 (577)
T ss_dssp HHHHHHCCHHHHHTTHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECTTSSEEEEEEEEEEEETTTTCSEEEEEEEET
T ss_pred HHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccCeeEEEEeCCCCEEEEEEEeeCCCCCCccCEEEEEEEeC
Confidence 4678899999999999999999999999999999999999999999984 55799999999999999999999999986
Q ss_pred CCCCeEEEEEeCCCCCeEEeecccccccccccccceEeeeeeeCCCCCCCCC-CChHHhhhhhhHHHHHHHHHHHHHHHH
Q 022503 80 TTKKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPDEDRLPGF-NSFQDTNIPLSVARVMVAWQTIGISIG 158 (296)
Q Consensus 80 ~~~~~~~flv~~~~~Gv~~~~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~~~-~~~~~~~~~~~~~r~~~aa~~~G~~~~ 158 (296)
+ +++++|+||++.|||++.+.|+++|+++++++++.|+||+||.+++||.. .++......+..+|+.+++.++|++++
T Consensus 199 g-~gis~flVp~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~VP~~~llg~~g~g~~~~~~~l~~~R~~~aa~~~G~a~~ 277 (577)
T 2z1q_A 199 G-EHFTAFLVERDTPGLSFGPEEKKMGIKASSTRQVILEDVKVPVENVLGEIGKGHKIAFNVLNVGRYKLGAGAVGGAKR 277 (577)
T ss_dssp T-TEEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESCTTCTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C-CeeEEEEEeCCCCCeEecCCCCCCCCCCCceeEEEecceeccHHHccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 67999999999999999999999999999999999999999999999876 678888888999999999999999999
Q ss_pred HHHHHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--------------CCChhHHHHHHHH
Q 022503 159 VYDMCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENG--------------KMSLGQASLGKAW 224 (296)
Q Consensus 159 ~l~~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~~--------------~~~~~~~~~~K~~ 224 (296)
+++.+++|+++|.+||+||+++|.+|++|++|.+.+++++++++++++.+|.+ .+....++++|++
T Consensus 278 al~~a~~ya~~R~qfg~pi~~~q~vq~~La~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~a~aK~~ 357 (577)
T 2z1q_A 278 ALELSAQYATQRVQFGRPIGRFGLIQQKLGEMASRIYAAESAVYRTVGLIDEALLGKKGPEAVMAGIEEYAVEASIIKVL 357 (577)
T ss_dssp HHHHHHHHHHHCBCSSSBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHHHhCccCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccchhhhhcchhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988764 2344678999999
Q ss_pred HHHHHHHHHHHHHHHhCCCCCcCcChHHHHhhhcCCcccccchHHHHHHHHHHHHhcCc
Q 022503 225 VSARARETVALGRELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITGFA 283 (296)
Q Consensus 225 a~~~a~~~~~~~~~~~G~~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~~~~~~l~~~ 283 (296)
+++.+.++++.++|+|||+||+++++++|+|||++...+++|++++++..+++.+++..
T Consensus 358 ase~a~~v~~~a~qi~GG~G~~~e~~l~r~~Rda~~~~i~eGt~~i~~~~ia~~~l~~~ 416 (577)
T 2z1q_A 358 GSEVLDYVVDEGVQIHGGYGYSQEYPIERAYRDARINRIFEGTNEINRLLIPGMLLRRA 416 (577)
T ss_dssp HHHHHHHHHHHHHHHHGGGGGBTTSHHHHHHHHHGGGGTTTSCHHHHHHHTTGGGSCC-
T ss_pred HHHHHHHHHHHHHHHhCCeeecCCChHHHHHhhCcceeeeCcHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999888653
No 27
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=100.00 E-value=3.6e-54 Score=407.74 Aligned_cols=275 Identities=30% Similarity=0.424 Sum_probs=258.2
Q ss_pred hhhhhcCCHHHHHHHhHhhhccccceeEEecCCCCCCCcCCCeeEEEEEC--CEEEEEeEEEeecCCCCCCEEEEEEEeC
Q 022503 2 LTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVE--GGWILEGQKRWIGNSTFADVLVVMARNT 79 (296)
Q Consensus 2 ~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~gs~~~~~~~~a~~~~--~g~~l~G~K~~vt~~~~a~~~lv~a~~~ 79 (296)
.+|..||+++||++|||++++|++++++++|||++|||...+.|+|++++ ++|+|||.|.|+|++..||+++|+++++
T Consensus 139 ~~l~~~Gt~eqk~~~Lp~l~~G~~~~~~alTEp~aGSD~~~~~t~A~~~~dG~~y~LnG~K~~is~~~~Ad~~lV~Ar~~ 218 (607)
T 2uxw_A 139 KGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTP 218 (607)
T ss_dssp HHHHHHCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEECTTSSEEEEEEEEEEEETTTTCSEEEEEEEEE
T ss_pred HHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccceeEEEEeCCCCEEEEEeEEEeecCCcccCEEEEEEEec
Confidence 56888999999999999999999999999999999999999999999963 4799999999999999999999999974
Q ss_pred C--------CCCeEEEEEeCCCCCeEEeecccccccccccccceEeeeeeeCCCCCCCCC-CChHHhhhhhhHHHHHHHH
Q 022503 80 T--------TKKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPDEDRLPGF-NSFQDTNIPLSVARVMVAW 150 (296)
Q Consensus 80 ~--------~~~~~~flv~~~~~Gv~~~~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~~~-~~~~~~~~~~~~~r~~~aa 150 (296)
+ .+++++|+||++.|||++.+.|+++|+++++++++.|+||+||.++++|.+ .++......+...|+.+++
T Consensus 219 ~~~~~~g~~~~gis~flVp~~~~Gv~v~~~~~~~G~rg~~t~~v~fddv~VP~~~llG~~g~G~~~~~~~l~~~Rl~~aa 298 (607)
T 2uxw_A 219 VTDPATGAVKEKITAFVVERGFGGITHGPPEKKMGIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAA 298 (607)
T ss_dssp EECTTTCCEEEEEEEEEEEGGGSSEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCcccCCCCCceEEEEEeCCCCCeEEecCccccCCCCCCeeEEEeccEEecHHHhcCCCCchHHHHHHHHHHHHHHHHH
Confidence 2 246899999999999999999999999999999999999999999999876 5788888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CChhHHHHHHHHHHHHH
Q 022503 151 QTIGISIGVYDMCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGK-MSLGQASLGKAWVSARA 229 (296)
Q Consensus 151 ~~~G~~~~~l~~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~~~-~~~~~~~~~K~~a~~~a 229 (296)
.++|+++++++.+++|+++|.+||+||+++|.+|++|++|.+.+++++++++++++.+|.+. +....++++|+++++.+
T Consensus 299 ~~~G~a~~al~~a~~ya~~R~qfG~pi~~~~~vq~~La~~~~~~eaaral~~~aa~~~d~~~~~~~~~~~~aK~~~se~a 378 (607)
T 2uxw_A 299 ALAGTMRGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGATDFQIEAAISKIFGSEAA 378 (607)
T ss_dssp HHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccccCCchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998763 34567899999999999
Q ss_pred HHHHHHHHHHhCCCCCcCcChHHHHhhhcCCcccccchHHHHHHHHH
Q 022503 230 RETVALGRELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAA 276 (296)
Q Consensus 230 ~~~~~~~~~~~G~~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~~~ 276 (296)
.++++.++|++||.||+++++++|+|||++...+++|++++++..++
T Consensus 379 ~~v~~~a~qv~GG~G~~~e~~l~r~~Rda~~~~i~eGt~~i~~~~ia 425 (607)
T 2uxw_A 379 WKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVA 425 (607)
T ss_dssp HHHHHHHHHHHTHHHHSSTTSHHHHHHHHGGGGTSSSCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCccccCccHHHHHHHhcccceeeCChHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988774
No 28
>3mkh_A Nitroalkane oxidase; oxidoreductase flavoenzyme, acyl-COA dehydrogen flavoprotein, oxidoreductase; HET: FAD; 2.00A {Podospora anserina}
Probab=100.00 E-value=2.1e-53 Score=390.42 Aligned_cols=280 Identities=17% Similarity=0.217 Sum_probs=259.9
Q ss_pred hhhhcCCHHHHHHHhHhhhcc--ccceeEEecCCCCCC-----CcCCCeeEEEEECCEEEEEeEEEeecCCC-----CCC
Q 022503 3 TIATSGSEAQKRKYLPSLAQL--TTMASWALTEPNHGS-----DASALSTAATKVEGGWILEGQKRWIGNST-----FAD 70 (296)
Q Consensus 3 ~l~~~g~~~q~~~~l~~i~~g--~~~~~~a~te~~~gs-----~~~~~~~~a~~~~~g~~l~G~K~~vt~~~-----~a~ 70 (296)
+|..+|+++ |++|||++++| +.++++++|||++|| |...+.|+|++++|||+|||+|.|+||+. .||
T Consensus 105 ~l~~~g~~~-~~~~l~~~~~G~g~~~~~~a~tEp~~gs~~~~sd~~~~~t~A~~~g~g~~lnG~K~~is~a~~~~~~~Ad 183 (438)
T 3mkh_A 105 PINLAAGPQ-HAEFLAPFLSGEGSPLASLVFSEPGGVANALEKGAPGFQTTARLEGDEWVINGEKMWATNCAGWDFKGCD 183 (438)
T ss_dssp HHHHHCCGG-GHHHHGGGSSSCSCCCEEEECCCTTCCTTTTCTTSCCCSCEEEEETTEEEEEEEECSCTTTTCTTSSCCS
T ss_pred HHHhhCCHH-HHHHHHHHhcCCCCceEEEEEccCCCCCCccccccccceeEEEEeCCEEEEEeEEEEecCCCccccccCc
Confidence 467899999 99999999986 589999999999998 58899999999999999999999999997 899
Q ss_pred EEEEEEEeCC---------CCCeEEEEEeCCC-----CC-eEEeecccccccccccccceEeeeeeeCCCCCCCCC-CCh
Q 022503 71 VLVVMARNTT---------TKKINAFIVKKDA-----PG-LTATKIENKIGLRMLQNGDILFKKVFVPDEDRLPGF-NSF 134 (296)
Q Consensus 71 ~~lv~a~~~~---------~~~~~~flv~~~~-----~G-v~~~~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~~~-~~~ 134 (296)
+++|++++++ .+++++|+||++. || |++.+.|+++|+++++++++.|+||+||++++||.+ .++
T Consensus 184 ~~~v~a~~~~~~~~~~~~~~~g~~~flV~~~~~~~~~pG~v~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~~~g~ 263 (438)
T 3mkh_A 184 LACVVCRDATTPLEEGQDPENKVMIILVTRADLDRNGEGSFEVLRHVATPGHTSVSGPHVRYTNVRVPTKNVLCPAGQGA 263 (438)
T ss_dssp EEEEEEEECSSCCCTTCCGGGGEEEEEEEHHHHHHHCTTSEEEEECCCCSSCTTCCCCEEEEEEEEEEGGGEEECTTTHH
T ss_pred EEEEEEEecCcccCcccCCCCceEEEEEecCccccCCCCcEEecCcCCCcCCcCCCceEEEECcEEECHHHcCCCCCchH
Confidence 9999999842 1468999999875 98 999999999999999999999999999999999876 577
Q ss_pred HHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhC-cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 022503 135 QDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFG-APLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKM 213 (296)
Q Consensus 135 ~~~~~~~~~~r~~~aa~~~G~~~~~l~~~~~~~~~r~~~~-~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~~~~ 213 (296)
......+...|+.+++.++|+++++++.+++|+++|++|| +|++++|.+|++|++|.++++++|++++++++.+|.+.+
T Consensus 264 ~~~~~~l~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~~g~~pi~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~ 343 (438)
T 3mkh_A 264 KVAFGAFDGSAVLVGAMGVGLMRAAFDAALKFAKEDNRGGAVPLLERQAFADLLSGVKIQTEAARALTWKAAHAMENGPG 343 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCSSCGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcEeCCCeeccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 8888889999999999999999999999999999999999 999999999999999999999999999999999998754
Q ss_pred C----hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcChHHHHhhhcCCcccccchH-HHHHHHHHHHHhcCc
Q 022503 214 S----LGQASLGKAWVSARARETVALGRELLGGNGIVTDFLVGKAFCDFEPFHTGEGSY-DINNLIAAREITGFA 283 (296)
Q Consensus 214 ~----~~~~~~~K~~a~~~a~~~~~~~~~~~G~~g~~~~~~l~r~~rd~~~~~~~~g~~-~~~~~~~~~~~l~~~ 283 (296)
. ...++++|+++++.+.++++.++|++||.||+++++++|+|||++...+++|++ ++++.++++.+++..
T Consensus 344 ~~~~~~~~~~~aK~~a~e~a~~~~~~a~q~~Gg~G~~~~~~l~r~~Rda~~~~i~~Gt~~~v~~~~i~r~ll~~~ 418 (438)
T 3mkh_A 344 DYDARRELALAAKVFCSEAAVKACTDVINAVGISAYDLQRPFSDLLNTAVVLPIFDGGNVGIRRRHLQQLMLKPT 418 (438)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGCTTSSHHHHHHHHTHHHHSSSCTTTTHHHHHHHHHHSTT
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhccCCCcHHHHHHHhheeeeecCChHHHHHHHHHHHHHhcc
Confidence 3 224678999999999999999999999999999999999999999999999999 999999999999975
No 29
>2c12_A Nitroalkane oxidase; oxidoreductase, flavoenzyme, acyl-COA dehydrogenase, long cell EDGE, FAD, inhibitor, flavoprotein; HET: SPM FAD PE4; 2.07A {Fusarium oxysporum} SCOP: a.29.3.1 e.6.1.1 PDB: 2c0u_A* 2zaf_A* 2reh_A* 3d9g_A* 3d9f_A* 3d9d_A* 3d9e_A* 3fcj_A*
Probab=100.00 E-value=5.2e-53 Score=387.83 Aligned_cols=284 Identities=18% Similarity=0.261 Sum_probs=260.4
Q ss_pred hhhhcCCHHHHHHHhHhhh--ccccceeEEecCCCCCC-----CcCCCeeEEEEECCEEEEEeEEEeecCCC-----CCC
Q 022503 3 TIATSGSEAQKRKYLPSLA--QLTTMASWALTEPNHGS-----DASALSTAATKVEGGWILEGQKRWIGNST-----FAD 70 (296)
Q Consensus 3 ~l~~~g~~~q~~~~l~~i~--~g~~~~~~a~te~~~gs-----~~~~~~~~a~~~~~g~~l~G~K~~vt~~~-----~a~ 70 (296)
+|..+|+++||++|||+++ +|+.++++++|||+.|| |...+.|+|++++|||+|||+|.|+||+. .||
T Consensus 103 ~l~~~g~~~q~~~~l~~~~~~~G~~~~~~a~tEp~~Gs~~~~sd~~~~~t~A~~~~~g~~lnG~K~~is~~~~~~~~~Ad 182 (439)
T 2c12_A 103 PVILCDSPSLQEKFLKPFISGEGEPLASLMHSEPNGTANWLQKGGPGLQTTARKVGNEWVISGEKLWPSNSGGWDYKGAD 182 (439)
T ss_dssp HHHHSSCHHHHHHHTGGGGSSCSCCCEEEECCCTTCSTTTTCTTSCCCSCEEEEETTEEEEEEEEECCTTTTTTTSSCCS
T ss_pred HHHHhCCHHHHHHHHHHHhhcCCCEEEEEEecCCCCCCCccccccccceeEEEEcCCEEEEEeEEEeecCCCccccccCc
Confidence 5778999999999999999 69999999999999987 57788999999999999999999999997 899
Q ss_pred EEEEEEEe-C----CC-------CCeEEEEEeCCCC------CeEEeecccccccccccccceEeeeeeeCCCCCCCCC-
Q 022503 71 VLVVMARN-T----TT-------KKINAFIVKKDAP------GLTATKIENKIGLRMLQNGDILFKKVFVPDEDRLPGF- 131 (296)
Q Consensus 71 ~~lv~a~~-~----~~-------~~~~~flv~~~~~------Gv~~~~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~~~- 131 (296)
+++|++++ + ++ +++++|+||.+.| |+++.+.|+++|+++++++++.|+||+||++++||.+
T Consensus 183 ~~~v~ar~~~~~~~~~~~~~~~~~g~~~flV~~~~pGv~~~~Gv~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~~ 262 (439)
T 2c12_A 183 LACVVCRVSDDPSKPQDPNVDPATQIAVLLVTRETIANNKKDAYQILGEPELAGHITTSGPHTRFTEFHVPHENLLCTPG 262 (439)
T ss_dssp EEEEEEEECSCTTSCCCTTSCGGGGEEEEEECHHHHHTSCGGGEEEEECCCBSSCTTCCCCEEEEEEEEEEGGGBCSCTT
T ss_pred EEEEEEEcCCcccCccccccCCCCceEEEEEECCCCcccCCCceEeCCcccccccCCCCceEEEEccEEecHHHcCCCCC
Confidence 99999998 5 21 3689999999998 8889999999999999999999999999999999876
Q ss_pred CChH-HhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 022503 132 NSFQ-DTNIPLSVARVMVAWQTIGISIGVYDMCYRYLME-RKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCE 209 (296)
Q Consensus 132 ~~~~-~~~~~~~~~r~~~aa~~~G~~~~~l~~~~~~~~~-r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d 209 (296)
.++. .....+...|+.+++.++|+++++++.+++|+++ |.+||+|++++|.+|++|+++.++++++|++++++++.++
T Consensus 263 ~g~~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~rr~~~G~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~ 342 (439)
T 2c12_A 263 LKAQGLVETAFAMSAALVGAMAIGTARAAFEEALVFAKSDTRGGSKHIIEHQSVADKLIDCKIRLETSRLLVWKAVTTLE 342 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSSCGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhceeeCCeehhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4566 7778889999999999999999999999999997 7789999999999999999999999999999999999998
Q ss_pred cCCCC----hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcChHHHHhhhcCCcccccchH-HHHHHHHHHHHhcCcC
Q 022503 210 NGKMS----LGQASLGKAWVSARARETVALGRELLGGNGIVTDFLVGKAFCDFEPFHTGEGSY-DINNLIAAREITGFAS 284 (296)
Q Consensus 210 ~~~~~----~~~~~~~K~~a~~~a~~~~~~~~~~~G~~g~~~~~~l~r~~rd~~~~~~~~g~~-~~~~~~~~~~~l~~~~ 284 (296)
.+.+. ...++++|+++++.+.++++.++|++||.||+++++++|+|||++...+++|++ ++++..+++ +++.|.
T Consensus 343 ~~~~~~~~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~~G~~~~~~~~~i~~-~l~~~~ 421 (439)
T 2c12_A 343 DEALEWKVKLEMAMQTKIYTTDVAVECVIDAMKAVGMKSYAKDMSFPRLLNEVMCYPLFDGGNIGLRRRQMQR-VMALED 421 (439)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGGBTTSSHHHHHHHHTTTTTSSSCTTTTHHHHHHH-HHTSTT
T ss_pred CCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCceEEcCCChHHHHHHhhhcceeecCChHHHHHHHHHH-HHhccc
Confidence 76543 235789999999999999999999999999999999999999999999999988 699988876 566888
Q ss_pred CCC
Q 022503 285 FKP 287 (296)
Q Consensus 285 ~~~ 287 (296)
+.|
T Consensus 422 ~~~ 424 (439)
T 2c12_A 422 YEP 424 (439)
T ss_dssp CCT
T ss_pred chh
Confidence 877
No 30
>3djl_A Protein AIDB; alpha helix, beta-barrel, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.70A {Escherichia coli} PDB: 3u33_A*
Probab=100.00 E-value=3.4e-51 Score=381.99 Aligned_cols=275 Identities=19% Similarity=0.213 Sum_probs=258.8
Q ss_pred hhhhhcCCHHHHHHHhHhhhcccc-------------ceeEEecCCCCCCCcCCCeeEEEEE-CCEEEEEeEEEeecCCC
Q 022503 2 LTIATSGSEAQKRKYLPSLAQLTT-------------MASWALTEPNHGSDASALSTAATKV-EGGWILEGQKRWIGNST 67 (296)
Q Consensus 2 ~~l~~~g~~~q~~~~l~~i~~g~~-------------~~~~a~te~~~gs~~~~~~~~a~~~-~~g~~l~G~K~~vt~~~ 67 (296)
..|..+| ++||++|||.+.+|+. ++++++|||++|||...+.|+|+++ +|+|+|||.|+|+| +.
T Consensus 143 ~~L~~~g-~eqk~~~lp~l~sge~~p~~~~~~~~~g~~~~~a~TEp~~GSDl~~~~T~A~~~~~g~y~LnG~K~f~S-a~ 220 (541)
T 3djl_A 143 PLLLQML-PAPFQDWTTPLLSDRYDSHLLPGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFS-VP 220 (541)
T ss_dssp HHHHHHC-CGGGGGGHHHHTCSCCCCCSSCGGGSSSCCEEEECCBTTBSSCGGGCCCEEEECTTSCEEEEEEEEEEE-CT
T ss_pred HHHHHcC-HHHHHHHHHHHhCCCcccccccccccccceeEEEeccCCcCCCcccceeEEEEcCCCeEEEEEEEEeec-cc
Confidence 4577889 9999999999999998 7899999999999999999999999 78899999999999 89
Q ss_pred CCCEEEEEEEeCCCCCeEEEEEeCCCC-----CeEEeecccccccccccccceEeeeeeeCCCCCCCCC-CChHHhhhhh
Q 022503 68 FADVLVVMARNTTTKKINAFIVKKDAP-----GLTATKIENKIGLRMLQNGDILFKKVFVPDEDRLPGF-NSFQDTNIPL 141 (296)
Q Consensus 68 ~a~~~lv~a~~~~~~~~~~flv~~~~~-----Gv~~~~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~~~-~~~~~~~~~~ 141 (296)
.||+++|+++++ +++++|+||++.| ||++.+.|+++|+++++++++.|+||+ ++++|.+ .++......+
T Consensus 221 ~Ad~~lVlArt~--~Gis~flVp~~~p~~~~~Gv~i~~~~~~~G~rgt~s~~v~fddv~---~~llG~~g~G~~~~~~~l 295 (541)
T 3djl_A 221 QSDAHLVLAQTA--GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAI---GWLLGLEGEGIRLILKMG 295 (541)
T ss_dssp TSSEEEEEEEET--TEEEEEEEESBCTTSCBCSEEEEEECCCSSCTTSCEEEEEEEEEE---EEEESSTTCHHHHTHHHH
T ss_pred ccCEEEEEEEEC--CceEEEEEecCCCCCCcCCeEEeeccccCCCcCCceeEEEEccce---eeeeecCCchHHHHHHHH
Confidence 999999999995 6899999999998 999999999999999999999999996 7889876 6788888899
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------h
Q 022503 142 SVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMS------L 215 (296)
Q Consensus 142 ~~~r~~~aa~~~G~~~~~l~~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~~~~~------~ 215 (296)
...|+..++.++|+++++++.+++|+++|.+||+|+.++|.+|++|+++.+++++++++++++++.+|.+.+. .
T Consensus 296 ~~~Rl~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~p~vq~~La~~~~~~eaaral~~~aa~~~d~~~~~~~~~~~~ 375 (541)
T 3djl_A 296 GMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTALLFRLARAWDRRADAKEALWAR 375 (541)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCccCCCchhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999986432 2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcChHHHHhhhcCCcccccchHHHHHHHHHHHHhcCc
Q 022503 216 GQASLGKAWVSARARETVALGRELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINNLIAAREITGFA 283 (296)
Q Consensus 216 ~~~~~~K~~a~~~a~~~~~~~~~~~G~~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~~~~~~l~~~ 283 (296)
..++++|+++++.+.++++.+++++||.||+++++++|+|||++...+++|++++++..++|.+++.|
T Consensus 376 ~~~~~aK~~ase~a~~~~~~a~q~~Gg~G~~~e~~l~r~~Rda~~~~i~eGt~ei~~~~i~r~l~~~~ 443 (541)
T 3djl_A 376 LFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPRLYREMPVNSIWEGSGNIMCLDVLRVLNKQA 443 (541)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGGGSTTSHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCeeecCCCcHHHHHHhhhhhheeCCcHHHHHHHHHHHHHhCc
Confidence 35789999999999999999999999999999999999999999999999999999999999998876
No 31
>2ddh_A Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundle, oxidoreductase; HET: FAD HXD; 2.07A {Rattus norvegicus} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 1is2_A*
Probab=100.00 E-value=5.8e-51 Score=388.93 Aligned_cols=281 Identities=23% Similarity=0.297 Sum_probs=252.4
Q ss_pred hhhhhcCCHHHHHHHhHhhhccccceeEEecCCCCCCCcCCCeeEEEEE--CCEEEEE-----eEEEeecC-CCCCCEEE
Q 022503 2 LTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKV--EGGWILE-----GQKRWIGN-STFADVLV 73 (296)
Q Consensus 2 ~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~gs~~~~~~~~a~~~--~~g~~l~-----G~K~~vt~-~~~a~~~l 73 (296)
.+|..+||++||++|||.+.+|+.++|+++|||++|||...+.|+|+++ +|+|+|| |.|+|+|| +..||+++
T Consensus 109 ~~i~~~Gt~eq~~~~L~~i~~Ge~~g~~a~TE~g~GSd~~~l~TtA~~d~~~~~~vLntP~~~G~K~wis~~a~~Ad~~v 188 (661)
T 2ddh_A 109 PTLLHQATAEQQERFFMPAWNLEITGTYAQTEMGHGTHLRGLETTATYDPKTQEFILNSPTVTSIKWWPGGLGKTSNHAI 188 (661)
T ss_dssp HHHC-CCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEECCSSTTSEECCTTTTTTCSEEE
T ss_pred HHHHHhCCHHHHHHHHHHHhCCCeeEEEeeccCCcCcCcccceeEEEEcCCCCeEEEcCCCCCeEEEecCCCcccCCEEE
Confidence 4678899999999999999999999999999999999999999999999 7899999 99999999 78999999
Q ss_pred EEEEeCCC---CCeEEEEEeC-C------CCCeEEeecccccccccccccceEeeeeeeCCCCCCCCC-----CC-----
Q 022503 74 VMARNTTT---KKINAFIVKK-D------APGLTATKIENKIGLRMLQNGDILFKKVFVPDEDRLPGF-----NS----- 133 (296)
Q Consensus 74 v~a~~~~~---~~~~~flv~~-~------~~Gv~~~~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~~~-----~~----- 133 (296)
|+|+++.+ .++++|+||. + .|||++.+.|+++|+++++++++.|+||+||++++|+.. .|
T Consensus 189 V~Ar~~~~~~~~G~~~FlVp~rd~~~~~~~pGV~v~~~~~k~Gl~g~~~~~v~Fd~VrVP~~~lLg~~~~v~~~G~~~~~ 268 (661)
T 2ddh_A 189 VLAQLITQGECYGLHAFVVPIREIGTHKPLPGITVGDIGPKFGYEEMDNGYLKMDNYRIPRENMLMKYAQVKPDGTYVKP 268 (661)
T ss_dssp EEEEEEETTEEEEEEEEEEECBCTTTCCBCTTEEEEECCCCSSCTTCCCEEEEESSEEEEGGGBCCSSCEECTTCCEECC
T ss_pred EEEEEccCCCCCceEEEEEecccccCCCCCCCeEEecCcccccCCCCcceEEEeccEEECHHHhcCcccccCCCCceecc
Confidence 99998532 3789999994 4 799999999999999999999999999999999999863 23
Q ss_pred --hHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhCc-------ccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 022503 134 --FQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGA-------PLAAFQITQQKLAQMLGNIQAMNLVGWRL 204 (296)
Q Consensus 134 --~~~~~~~~~~~r~~~aa~~~G~~~~~l~~~~~~~~~r~~~~~-------~~~~~~~~q~~l~~~~~~~~a~~~~~~~~ 204 (296)
+......+..+|+.+++.++|+++++++.+++|++.|++||+ |+.++|.+|++|+++.+++++++.+++++
T Consensus 269 ~~~~~~~~~l~~~R~~iaa~~~G~a~~al~~a~~ya~~R~qfg~~~~~~e~~i~~~q~vq~rLa~~~a~~~aar~~~~~a 348 (661)
T 2ddh_A 269 LSNKLTYGTMVFVRSFLVGNAAQSLSKACTIAIRYSAVRRQSEIKQSEPEPQILDFQTQQYKLFPLLATAYAFHFVGRYM 348 (661)
T ss_dssp C--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSCSSTTSCCCBGGGSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556677899999999999999999999999999999998 89999999999999999999999999999
Q ss_pred HHHHHc-------CCC-----ChhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcChHHHHhhhcCCcccccchHHHHH
Q 022503 205 CRMCEN-------GKM-----SLGQASLGKAWVSARARETVALGRELLGGNGIVTDFLVGKAFCDFEPFHTGEGSYDINN 272 (296)
Q Consensus 205 ~~~~d~-------~~~-----~~~~~~~~K~~a~~~a~~~~~~~~~~~G~~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~ 272 (296)
++.++. +.. ....++++|.++++.+.++++.|+++|||+||+.+++++++|||++...+++|++++++
T Consensus 349 a~~~~~~~~~~~~g~~~~~~~~~~~aa~aK~~at~~a~~~~~~a~q~~GG~G~~~~~~l~r~~rda~~~~~~eG~~~vl~ 428 (661)
T 2ddh_A 349 KETYLRINESIGQGDLSELPELHALTAGLKAFTTWTANAGIEECRMACGGHGYSHSSGIPNIYVTFTPACTFEGENTVMM 428 (661)
T ss_dssp HHHHHC----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHSGGGSHHHHHHHHGGGGTSSSCHHHHH
T ss_pred HHHHHHHHHHhhcCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccCcHHHHHHhcceeeEecCchHHHH
Confidence 998863 221 23467899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcC
Q 022503 273 LIAAREITGF 282 (296)
Q Consensus 273 ~~~~~~~l~~ 282 (296)
.++++.+++.
T Consensus 429 ~~iar~lL~~ 438 (661)
T 2ddh_A 429 LQTARFLMKI 438 (661)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998875
No 32
>1w07_A Acyl-COA oxidase; oxidoreductase, peroxisomal beta-oxidation, FAD cofactor; HET: FAD; 2.0A {Arabidopsis thaliana} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 2fon_A*
Probab=100.00 E-value=1.2e-50 Score=387.25 Aligned_cols=283 Identities=24% Similarity=0.324 Sum_probs=257.7
Q ss_pred hhhhhcCCHHHHHHHhHhhhccccceeEEecCCCCCCCcCCCeeEEEEE--CCEEEEE-----eEEEeecC-CCCCCEEE
Q 022503 2 LTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKV--EGGWILE-----GQKRWIGN-STFADVLV 73 (296)
Q Consensus 2 ~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~gs~~~~~~~~a~~~--~~g~~l~-----G~K~~vt~-~~~a~~~l 73 (296)
.+|..+|+++||++|||++++|+.++|+++|||++|||...+.|+|+++ +|||+|| |.|+|+|+ +..||+++
T Consensus 108 ~~l~~~Gt~eqk~~~L~~i~~Ge~~~~~a~TEp~~GSd~~~l~TtA~~d~~~~g~vLntP~~~G~K~~is~~a~~Ad~~l 187 (659)
T 1w07_A 108 PAIKGQGTEEQQKKWLSLANKMQIIGCYAQTELGHGSNVQGLETTATLDPKTDEFVIHTPTQTASKWWPGGLGKVSTHAV 187 (659)
T ss_dssp HHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEECCSGGGSEECCTTTTTTCSEEE
T ss_pred HHHHHcCCHHHHHHHhhHHhcCCEEEEEEecCCCCCCCcccceeEEEEcCCCCEEEEcCCCCCeEEEeecCCCCCCCEEE
Confidence 4678899999999999999999999999999999999999999999998 6899999 99999999 89999999
Q ss_pred EEEEeCCC---CCeEEEEEeC-C------CCCeEEeecccccc---cccccccceEeeeeeeCCCCCCCC-------CCC
Q 022503 74 VMARNTTT---KKINAFIVKK-D------APGLTATKIENKIG---LRMLQNGDILFKKVFVPDEDRLPG-------FNS 133 (296)
Q Consensus 74 v~a~~~~~---~~~~~flv~~-~------~~Gv~~~~~~~~~g---~~~~~~~~~~f~~v~Vp~~~~l~~-------~~~ 133 (296)
|+|+++++ .++++|+||. + .|||++.+.|+++| +++++++.+.|+||+||++++|+. +.+
T Consensus 188 V~Ar~~~~~~~~G~~~flVp~r~~~~~~~~pGV~v~~~~~~~G~~~~~g~~~~~v~fd~VrVP~~~lLg~~~~v~~~g~~ 267 (659)
T 1w07_A 188 VYARLITNGKDYGIHGFIVQLRSLEDHSPLPNITVGDIGTKMGNGAYNSMDNGFLMFDHVRIPRDQMLMRLSKVTREGEY 267 (659)
T ss_dssp EEEEEEETTEEEEEEEEEEECBCTTTCCBCTTEEEEECCCBSSSSGGGGSCCEEEEESSEEEEGGGBCCSSEEECTTCCE
T ss_pred EEEEECCCCCCCCeEEEEEEccccCCCCCCCCeEEecCccCccccccCCCCceEEEeccEEECHHHhcCCcCccCCCCce
Confidence 99998532 3689999995 4 69999999999999 999999999999999999999985 222
Q ss_pred h------HHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhCc-------ccccchhHHHHHHHHHHHHHHHHHH
Q 022503 134 F------QDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGA-------PLAAFQITQQKLAQMLGNIQAMNLV 200 (296)
Q Consensus 134 ~------~~~~~~~~~~r~~~aa~~~G~~~~~l~~~~~~~~~r~~~~~-------~~~~~~~~q~~l~~~~~~~~a~~~~ 200 (296)
+ ......+...|+.+++.++|+++++++.+++|++.|++||+ |+.++|.+|++++++.+++++++++
T Consensus 268 ~~~~~~~~~~~~~l~~~R~~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~~e~pi~~~q~vq~rLa~~~a~~~a~~~~ 347 (659)
T 1w07_A 268 VPSDVPKQLVYGTMVYVRQTIVADASNALSRAVCIATRYSAVRRQFGAHNGGIETQVIDYKTQQNRLFPLLASAYAFRFV 347 (659)
T ss_dssp EECSSCGGGCTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSCC---CCCCBGGGSHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCcccchhccHHHHHHHHHHHHHHHHHHHH
Confidence 2 24556678899999999999999999999999999999998 8999999999999999999999999
Q ss_pred HHHHHHHHH-------cCCC-----ChhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcChHHHHhhhcCCcccccchH
Q 022503 201 GWRLCRMCE-------NGKM-----SLGQASLGKAWVSARARETVALGRELLGGNGIVTDFLVGKAFCDFEPFHTGEGSY 268 (296)
Q Consensus 201 ~~~~~~~~d-------~~~~-----~~~~~~~~K~~a~~~a~~~~~~~~~~~G~~g~~~~~~l~r~~rd~~~~~~~~g~~ 268 (296)
++++++.++ .+.+ ....++++|.++++.+.++++.|+++|||+||+.+++++++|||++...+++|++
T Consensus 348 ~~~aa~~~~~~~~~~~~g~~~~~~~~~~~~a~aK~~at~~a~~~~~~a~q~~GG~G~~~~~~l~r~~rda~~~~~~eG~~ 427 (659)
T 1w07_A 348 GEWLKWLYTDVTERLAASDFATLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLWCSGLPELFAVYVPACTYEGDN 427 (659)
T ss_dssp HHHHHHHHHHHHHHTTTTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGBGGGSHHHHHHHHGGGGTTTSCH
T ss_pred HHHHHHHHHHHHHhhhcCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCHHHHHHhcceeEEEeCCh
Confidence 999888763 3332 2456889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCcC
Q 022503 269 DINNLIAAREITGFAS 284 (296)
Q Consensus 269 ~~~~~~~~~~~l~~~~ 284 (296)
++++..+++.+++..+
T Consensus 428 ~v~~~~iar~lL~~~~ 443 (659)
T 1w07_A 428 VVLQLQVARFLMKTVA 443 (659)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999988654
No 33
>2rfq_A 3-HSA hydroxylase, oxygenase; rhodococcus SP. RHA1, structural genomics protein structure initiative, midwest center for structural genomics, MCSG; HET: 1PS; 1.65A {Rhodococcus SP} PDB: 3aff_A 3afe_A
Probab=100.00 E-value=3.9e-50 Score=364.04 Aligned_cols=270 Identities=15% Similarity=0.123 Sum_probs=245.5
Q ss_pred hhhhhcCCHHHHHHHhHhhhccccceeEEecCCCCCCCcCCCeeEEEEECCEEEEEeEEEeecCCCCCCEEEEEEEeCCC
Q 022503 2 LTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNSTFADVLVVMARNTTT 81 (296)
Q Consensus 2 ~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~gs~~~~~~~~a~~~~~g~~l~G~K~~vt~~~~a~~~lv~a~~~~~ 81 (296)
.+|..+|+++||++|+| +|+.++++++| | .|+|++++|||+|||.|.|+||+..||+++|+++++++
T Consensus 94 ~~l~~~g~~~q~~~~l~---~g~~~~~~a~t-p---------~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~~~~ 160 (394)
T 2rfq_A 94 WHLALFSQQAQEDVWGN---DTDVRISSSYA-P---------MGAGQVVDGGYTVNGAWAWSSGCDHASWAVLGGPVIKD 160 (394)
T ss_dssp HHHTTSCHHHHHHHHSS---CTTCCEEEECS-C---------SEEEEEETTEEEEEEEEEEETTGGGCSEEEEEEEEEET
T ss_pred HHHHhCCHHHHHHHhCC---CCCeEEEeccC-C---------CceEEEeCCeEEEeeeEeccCCCcccceEEEeeeecCC
Confidence 35678999999999999 78989999987 3 58999999999999999999999999999999998322
Q ss_pred ---CCeEEEEEeCCCCCeEEeecccccccccccccceEeeeeeeCCCCCCCC--------C-----CChHHhhhhhhHHH
Q 022503 82 ---KKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPDEDRLPG--------F-----NSFQDTNIPLSVAR 145 (296)
Q Consensus 82 ---~~~~~flv~~~~~Gv~~~~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~~--------~-----~~~~~~~~~~~~~r 145 (296)
+++++|+||.+ ||++.+.|+++|+++++++++.||||+||++++++. . .+.......+...|
T Consensus 161 g~~~~~~~flV~~~--gv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~~~g~~~g~~~~~g~~~~~~~~~~~r 238 (394)
T 2rfq_A 161 GRPVDFVSFLIPRE--DYRIDDVWNVVGLRGTGSNTVVVEDVFVPTHRVLSFKAMSNLTAPGLERNTAPVYKMPWGTIHP 238 (394)
T ss_dssp TEEEEEEEEEEEGG--GCEEECCCCBSSCGGGCCEEEEEEEEEEEGGGEEEHHHHHTTCCGGGTTCCCGGGGSCHHHHHH
T ss_pred CCCCceeEEEEEhh--hcEEeCCccccccccCCCCceEEcceEcChHHhcccccccccCCCCcccCCCccccccHHHHHH
Confidence 26899999997 899999999999999999999999999999999964 1 23445556678899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh---hhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH----cCCCC----
Q 022503 146 VMVAWQTIGISIGVYDMCYRYLMERK---QFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCE----NGKMS---- 214 (296)
Q Consensus 146 ~~~aa~~~G~~~~~l~~~~~~~~~r~---~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d----~~~~~---- 214 (296)
+.+++.++|+++++++.+++|+++|. +||+|++++|.+|+++++|.+++++++++++++++.+| .+.+.
T Consensus 239 ~~~aa~~~G~a~~al~~a~~ya~~R~~~~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~g~~~~~~~ 318 (394)
T 2rfq_A 239 TTISAPIVGMAYGAYDAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEASSDIDAAWRQLSGNVADEYALLVAGEEVPFEL 318 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCcCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHH
Confidence 99999999999999999999999999 99999999999999999999999999999999999998 65443
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcChHHHHhhhcCCcccccc-hHHHHHHHHHHHHhcCcCCC
Q 022503 215 LGQASLGKAWVSARARETVALGRELLGGNGIVTDFLVGKAFCDFEPFHTGEG-SYDINNLIAAREITGFASFK 286 (296)
Q Consensus 215 ~~~~~~~K~~a~~~a~~~~~~~~~~~G~~g~~~~~~l~r~~rd~~~~~~~~g-~~~~~~~~~~~~~l~~~~~~ 286 (296)
...++++|+++++.+.++++.++|++||.||+++++++|+|||++...+++| ++++++..+++.++|+|+..
T Consensus 319 ~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~g~~~~~~~~~i~~~llg~~~~~ 391 (394)
T 2rfq_A 319 RLRARRDQVRATGRAISSIDKLFESSGATALANGTPLQRFWRDAHAGRVHAANDPERAYVMYGTGEFGLPITD 391 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTCHHHHHHHHHHHHTTSGGGCHHHHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhChhhhhcCCcHHHHHHHHHHHHcccccCchhHHHHHHHHHhCCCCCC
Confidence 2368899999999999999999999999999999999999999999999999 99999999999999998654
No 34
>3mxl_A Nitrososynthase; flavin monooxygenase, acyl-COA dehydrogenas oxidoreductase; 3.15A {Micromonospora carbonacea}
Probab=100.00 E-value=2.3e-50 Score=365.63 Aligned_cols=268 Identities=17% Similarity=0.185 Sum_probs=237.3
Q ss_pred hcCCHHHH---HHHhHhhhccccceeEEecCCCCCCCcCCCeeEEEEECCEEEEEeEEEeecCCCCCCEEEEEEEeCCC-
Q 022503 6 TSGSEAQK---RKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNSTFADVLVVMARNTTT- 81 (296)
Q Consensus 6 ~~g~~~q~---~~~l~~i~~g~~~~~~a~te~~~gs~~~~~~~~a~~~~~g~~l~G~K~~vt~~~~a~~~lv~a~~~~~- 81 (296)
.+|+++|| ++|||++.+|+.++++++|||++|+ ..+.+ .++|||+|||+|.|+||+..||+++|+++++++
T Consensus 106 ~~g~~~qk~~~~~~l~~~~~g~~~~~~a~tEp~~~~--~~~~t---~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~~~~~ 180 (395)
T 3mxl_A 106 QHGTPPVRAMAERLLRAMAEGEAAVCGALKDAPGVV--TELHS---DGAGGWLLSGRKVLVSMAPIATHFFVHAQRRDDD 180 (395)
T ss_dssp HSSCHHHHHHHHHHHHHHHHTSCCEECCCSBCTTCC--CEEEE---CSSSCEEEEEEEEEETTGGGCSEECCCEEEECTT
T ss_pred hcCCHHHHhHHHHHHHHHhcCCcEEEEEecCCCCCC--CceEE---ecCCEEEEeeEEEEecCccccCEEEEEEEeCCCC
Confidence 56999999 9999999999999999999998753 22222 278899999999999999999999999998643
Q ss_pred --CCeEEEEEeCCCCCeEEeecccccccccccccceEeeeeeeCCCCCCC--CC-CChHHhhhhhhHHHHHHHHHHHHHH
Q 022503 82 --KKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPDEDRLP--GF-NSFQDTNIPLSVARVMVAWQTIGIS 156 (296)
Q Consensus 82 --~~~~~flv~~~~~Gv~~~~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~--~~-~~~~~~~~~~~~~r~~~aa~~~G~~ 156 (296)
+++++|+||++.|||++.+.|+++|++++++++++|+||+||+++++| .. .++..........|+.+++.++|++
T Consensus 181 ~~~g~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~f~~v~Vp~~~~lg~~~~g~g~~~~~~~~~~~r~~~aa~~~G~a 260 (395)
T 3mxl_A 181 GSVFLAVPVVHRDAPGLTVLDNWDGLGMRASGTLEVVFDRCPVRADELLERGPVGARRDAVLAGQTVSSITMLGIYAGIA 260 (395)
T ss_dssp SCEEEECCCEETTCTTEEEECCCCBSSCTTSCCEEEEEEEEEECGGGCCEEEESSCCCTTHHHHHHHHHGGGHHHHHHHH
T ss_pred CCCceEEEEEECCCCceEeCCCchhcCCCCCCcceEEEcceEcCHHHhcCCCCCCccHHHHHhhhHHHHHHHHHHHHHHH
Confidence 358899999999999999999999999999999999999999999997 33 4444333445568899999999999
Q ss_pred HHHHHHHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CCCC------hhHHHHHHHH
Q 022503 157 IGVYDMCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCEN------GKMS------LGQASLGKAW 224 (296)
Q Consensus 157 ~~~l~~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~------~~~~------~~~~~~~K~~ 224 (296)
+++++.+++|++ ++|++++|.+|+++++|.++++++|++++++++.+|. ..+. ...++++|++
T Consensus 261 ~~al~~a~~~a~-----~r~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~ak~~ 335 (395)
T 3mxl_A 261 QAARDIAVGFCA-----GRGGEPRAGARALVAGLDTRLYALRTTVGAALTNADAASVDLSGDPDERGRRMMTPFQYAKMT 335 (395)
T ss_dssp HHHHHHHHHHHH-----TTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc-----CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCccccchhHHHHHHHHHHH
Confidence 999999999998 5689999999999999999999999999999998875 1111 1456789999
Q ss_pred HHHHHHHHHHHHHHHhCCCCCcCcChHHHHhhhcCCcc-cccchHHHHHHHHHHHHhcCc
Q 022503 225 VSARARETVALGRELLGGNGIVTDFLVGKAFCDFEPFH-TGEGSYDINNLIAAREITGFA 283 (296)
Q Consensus 225 a~~~a~~~~~~~~~~~G~~g~~~~~~l~r~~rd~~~~~-~~~g~~~~~~~~~~~~~l~~~ 283 (296)
+++.+.++++.++|++||.||+++++++|+|||++... +++|++++++..+++.+||+|
T Consensus 336 ~~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~~~~~g~~~~~~~~ia~~~Lglp 395 (395)
T 3mxl_A 336 VNELAPAVVDDCLSLVGGLAYTAGHPLSRLYRDVRAGGFMQPYSYVDAVDYLSGQALGLD 395 (395)
T ss_dssp HHHHHHHHHHHHHHHHCGGGGBTTSHHHHHHHHGGGGGGCSSCCHHHHHHHHHHHHSCC-
T ss_pred HHHHHHHHHHHHHHHhChHhccCCCcHHHHHHHHHhccccCCCCHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999 999999999999999999987
No 35
>2jbr_A P-hydroxyphenylacetate hydroxylase C2 oxygenase C; flavoenzyme hydroxylase, oxidoreductase; 2.3A {Acinetobacter baumannii} PDB: 2jbs_A* 2jbt_A*
Probab=100.00 E-value=7.9e-50 Score=364.93 Aligned_cols=271 Identities=15% Similarity=0.094 Sum_probs=246.5
Q ss_pred hhhhhcCCHHHHHHHhHhhhccccceeEEecCCCCCCCcCCCeeEEEEECCEEEEEeEEEeecCCCCCCEEEEEEEeCCC
Q 022503 2 LTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNSTFADVLVVMARNTTT 81 (296)
Q Consensus 2 ~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~gs~~~~~~~~a~~~~~g~~l~G~K~~vt~~~~a~~~lv~a~~~~~ 81 (296)
.+|..+|+++||++|+|. |+.++++++| | .|+|++++|||+|||+|.|+||+..||+++|++++++.
T Consensus 122 ~~l~~~g~~~q~~~~l~~---g~~~~a~a~t-p---------~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~~~~ 188 (422)
T 2jbr_A 122 HQIAMFSKQLQDEIWLKD---PDATASSSIA-P---------FGKVEEVEGGIILNGDYGWSSGCDHAEYAIVGFNRFDA 188 (422)
T ss_dssp HHHTTSCHHHHHHHHTTC---TTCCEEEECS-C---------CSEEEEETTEEEEEEEEEEETTGGGCSEEEEEEEEECT
T ss_pred HHHHhCCHHHHHHHHccC---CCeEEEeecC-C---------CeeEEEeCCEEEEeeeEeeecCCccccEEEEEEEecCC
Confidence 357789999999999997 8889999987 4 57999999999999999999999999999999998532
Q ss_pred ---CCeEEEEEeCCCCCeEEeecccccccccccccceEeeeeeeCCCCCCCCC---------CC-----hHHhhhhhhHH
Q 022503 82 ---KKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPDEDRLPGF---------NS-----FQDTNIPLSVA 144 (296)
Q Consensus 82 ---~~~~~flv~~~~~Gv~~~~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~~~---------~~-----~~~~~~~~~~~ 144 (296)
+++++|+||++ ||++.+.|+++|+++++++++.|+||+||++++|+.. .+ +......+...
T Consensus 189 ~g~~g~~~flV~~~--gv~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~~~~~g~~~g~g~~~~~~~~~~~~~~~~ 266 (422)
T 2jbr_A 189 DGNKIYSFGVIPRS--DYEIVDNWYAQAIKSSGSKMLKLVNVFIPEYRISKAKDMMEGKSAGFGLYPDSKIFYTPYRPYF 266 (422)
T ss_dssp TSCEEEEEEEEEGG--GCEEECCCCBSSSGGGCCEEEEEEEEEEEGGGEEEHHHHHHTCSTTTTSCTTCSSSSSCHHHHH
T ss_pred CCCceeEEEEEEcC--ceEEeCCccccCcCCCCCCcEEEeeEEecHHHeecccccccCCCCcccccCCCcccccchHHHH
Confidence 36899999997 8999999999999999999999999999999999752 23 44556678889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh--hhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH----cCCCC----
Q 022503 145 RVMVAWQTIGISIGVYDMCYRYLMERK--QFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCE----NGKMS---- 214 (296)
Q Consensus 145 r~~~aa~~~G~~~~~l~~~~~~~~~r~--~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d----~~~~~---- 214 (296)
|+.+++.++|+++++++.+++|+++|. +||+|++++|.+|++|++|.++++++|++++++++.+| .+.+.
T Consensus 267 r~~~aa~~lG~a~~al~~a~~ya~~R~~~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~g~~~~~~~ 346 (422)
T 2jbr_A 267 ASGFSAVSLGIAERMIEAFKEKQRNRVRAYTGANVGLATPALMRIAESTHQVAAARALLEKTWEDHRIHGLNHQYPNKET 346 (422)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHTTCBCTTTCCBCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHH
Confidence 999999999999999999999999998 99999999999999999999999999999999999998 55442
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcChHHHHhhhcCCcccccchH-HHHHHHHHHHHhcCcCCCC
Q 022503 215 LGQASLGKAWVSARARETVALGRELLGGNGIVTDFLVGKAFCDFEPFHTGEGSY-DINNLIAAREITGFASFKP 287 (296)
Q Consensus 215 ~~~~~~~K~~a~~~a~~~~~~~~~~~G~~g~~~~~~l~r~~rd~~~~~~~~g~~-~~~~~~~~~~~l~~~~~~~ 287 (296)
...++++|+++++.+.++++.++|++||.||+++++++|+|||++...+++|++ ++++..+++.++|+|+..|
T Consensus 347 ~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~G~~~e~~~~~ia~~~lg~~~~~~ 420 (422)
T 2jbr_A 347 LAFWRTNQAYAVKMCIEAVDRLMAAAGATSFMDNSELQRLFRDAHMTGAHAYTDYDVCAQILGRELMGMEPDPT 420 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSCGGGGBTTCHHHHHHHHHHHHTSSTTTCHHHHHHHHHHHHTTCCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCHHhhhcCCcHHHHHHHHHHHhcCCccchhHHHHHHHHHHhCCCCCCC
Confidence 246889999999999999999999999999999999999999999999999999 9999999999999986543
No 36
>2or0_A Hydroxylase; APC7385, rhodococcus SP. RHA1, structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 2.10A {Rhodococcus SP}
Probab=100.00 E-value=9.8e-50 Score=363.52 Aligned_cols=270 Identities=15% Similarity=0.072 Sum_probs=245.6
Q ss_pred hhhhhcCCHHHHHHHhHhhhccccceeEEecCCCCCCCcCCCeeEEEEECCEEEEEeEEEeecCCCCCCEEEEEEEeCC-
Q 022503 2 LTIATSGSEAQKRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNSTFADVLVVMARNTT- 80 (296)
Q Consensus 2 ~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~gs~~~~~~~~a~~~~~g~~l~G~K~~vt~~~~a~~~lv~a~~~~- 80 (296)
.+|..+|+++||++|+| +|+.++++++| | .|+|++++|||+|||+|.|+||+..||+++|++++++
T Consensus 107 ~~l~~~g~~~q~~~~l~---~g~~~~a~a~t-p---------~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~~~~ 173 (414)
T 2or0_A 107 WELAFADPQVQEEIWGE---DNDTWMASPYA-P---------MGVATPVDGGYVLKGRWSFSSGTDHCQWAFLGAMVGDG 173 (414)
T ss_dssp HHHTTSCHHHHHHHHSS---CTTCCEECCCS-C---------CEEEEEETTEEEEEEEEEEETTGGGCSEEEEEEEECC-
T ss_pred HHHHhCCHHHHHHHHcc---CCCeEEEeccC-C---------CceeEEECCeEEEEeeEeccCCCchhhEEEEEEEecCC
Confidence 35778999999999999 69999999987 4 6899999999999999999999999999999999853
Q ss_pred --CC---CeEEEEEeCCCCCeEEe-ecccccccccccccceEeeeeeeCCCCCCCCC-------------CChHHhhhhh
Q 022503 81 --TK---KINAFIVKKDAPGLTAT-KIENKIGLRMLQNGDILFKKVFVPDEDRLPGF-------------NSFQDTNIPL 141 (296)
Q Consensus 81 --~~---~~~~flv~~~~~Gv~~~-~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~~~-------------~~~~~~~~~~ 141 (296)
.+ ++++|+||++ ||++. +.|+++|+++++++++.||||+||++++|+.. .++......+
T Consensus 174 ~g~~~~~g~~~flV~~~--gv~v~~~~~~~~G~r~~~~~~v~fd~v~VP~~~~lg~~~~~~g~~~g~~~~~g~~~~~~~~ 251 (414)
T 2or0_A 174 EGGIATPSSLHVILPRT--DYQIVEDTWDVIGLRGTGSKDLIVDGAFVPGYRTLNAAKVMDGRAQKEAGRPEPLFNMPYS 251 (414)
T ss_dssp ----CCCSEEEEEEEGG--GCEEETTCCCBSSCGGGCCEEEEEEEEEEEGGGEEEHHHHHHSHHHHHHTCSCSGGGSCHH
T ss_pred CCCcccceeEEEEEEhh--hcEEecCCCccccCcccCCCcEEEccEEecHHHeeccccccccCCCccccCCCccccccHH
Confidence 12 7899999997 89999 89999999999999999999999999999751 2344555677
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-CcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH----cCCCC--
Q 022503 142 SVARVMVAWQTIGISIGVYDMCYRYLMERKQF-GAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCE----NGKMS-- 214 (296)
Q Consensus 142 ~~~r~~~aa~~~G~~~~~l~~~~~~~~~r~~~-~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d----~~~~~-- 214 (296)
...|+.+++.++|+++++++.+++|+++|++| |+|++++|.+|++|+++.++++++|++++++++.+| .+.+.
T Consensus 252 ~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~f~G~~i~~~q~vq~~la~~~~~~~aar~l~~~aa~~~~~~~~~g~~~~~ 331 (414)
T 2or0_A 252 CMFPLGITAAVIGITEGALACHIAVQKDRVAITGQKIKEDPYVLSAIGESAAEINASRVSLIETADRFYDKVDAGKEITF 331 (414)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCTTSCBGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCH
Confidence 88999999999999999999999999999999 999999999999999999999999999999999998 55443
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcChHHHHhhhcCCcccccc-hHHHHHHHHHHHHhcCcCCC
Q 022503 215 --LGQASLGKAWVSARARETVALGRELLGGNGIVTDFLVGKAFCDFEPFHTGEG-SYDINNLIAAREITGFASFK 286 (296)
Q Consensus 215 --~~~~~~~K~~a~~~a~~~~~~~~~~~G~~g~~~~~~l~r~~rd~~~~~~~~g-~~~~~~~~~~~~~l~~~~~~ 286 (296)
...++++|+++++.+.++++.++|++||.||+++++++|+|||++...+++| ++++++..+++.++++|+..
T Consensus 332 ~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~G~t~~~~~~~ia~~~lg~~~~~ 406 (414)
T 2or0_A 332 EERAIGRRTQIAAAWRAVRAADEIFARAGGGALHYKTPMQRFWRDAHAGLAHAVHVPGPTNHASALTQLGGEPQG 406 (414)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGGBTTSSHHHHHHHHHHHHTSGGGCCHHHHHHHHHHHTTCCCCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhChHhhccCCchhHHHHHHHHHHcCCcccchHHHHHHHHHHhCCCCCC
Confidence 2368899999999999999999999999999999999999999999999999 99999999999999998543
No 37
>3m9v_A FAD-dependent oxidoreductase; KIJD3, fatty acyl-COA dehydrogenase family, kijanose, kijani FAD, flavoprotein; HET: TYD; 2.05A {Actinomadura kijaniata}
Probab=100.00 E-value=6.1e-49 Score=360.86 Aligned_cols=273 Identities=17% Similarity=0.216 Sum_probs=235.5
Q ss_pred hhcCCHHH---HHHHhHhhhccccceeEEecCCCCCCCcCCCeeEEEEECCEEEEEeEEEeecCCCCCCEEEEEEEeCCC
Q 022503 5 ATSGSEAQ---KRKYLPSLAQLTTMASWALTEPNHGSDASALSTAATKVEGGWILEGQKRWIGNSTFADVLVVMARNTTT 81 (296)
Q Consensus 5 ~~~g~~~q---~~~~l~~i~~g~~~~~~a~te~~~gs~~~~~~~~a~~~~~g~~l~G~K~~vt~~~~a~~~lv~a~~~~~ 81 (296)
..+|+++| |++||+++.+|+.++++++|||+++ ...+.+ .++|||+|||.|.|+||+.+||+++|+++++++
T Consensus 116 ~~~gt~~q~~~k~~~l~~l~~g~~~~~~a~tEp~~~--~~~~~t---~~~~g~vlnG~K~~~s~a~~Ad~~~v~art~~~ 190 (439)
T 3m9v_A 116 WRHGDERARTLAERILRGMVAGDAVVCSGIKDHHTA--VTTLRP---DGAGGWLLSGRKTLVSMAPVGTHFVINARTDGT 190 (439)
T ss_dssp HHHSCHHHHHHHHHHHHHHHHTCCCEEEECEECTTC--CCEEEE---CSSSCEEEEEEEEEETTGGGCSEEEECEEECC-
T ss_pred HhcCCHHHHHHHHHHHHHHhCCCceEEEeecCCCCC--CCceee---ccCCEEEEEeEEEeecCccccCEEEEEEEecCC
Confidence 46799999 9999999999999999999999864 222222 278889999999999999999999999998643
Q ss_pred ---CCeEEEEEeCCCCCeEEeecccccccccccccceEeeeeeeCCCCCCC--CC-CChHHhhhhhhHHHHHHHHHHHHH
Q 022503 82 ---KKINAFIVKKDAPGLTATKIENKIGLRMLQNGDILFKKVFVPDEDRLP--GF-NSFQDTNIPLSVARVMVAWQTIGI 155 (296)
Q Consensus 82 ---~~~~~flv~~~~~Gv~~~~~~~~~g~~~~~~~~~~f~~v~Vp~~~~l~--~~-~~~~~~~~~~~~~r~~~aa~~~G~ 155 (296)
.++++|+||++.|||++.+.|+++|+++++++++.|+||+||++++|+ .. .++.........+|+.+++.++|+
T Consensus 191 ~~~~g~~~flVp~~~pGv~i~~~~~~~G~~~~~~~~v~fddv~VP~~~~lg~~~~g~g~~~~~~~~~~~r~~~aa~~~G~ 270 (439)
T 3m9v_A 191 DGPPRLASPVVTRDTPGFTVLDNWDGLGMRASGTVDIVFDDCPIPADHVLMRDPVGARNDAVLAGQTVSSVSVLGVYVGV 270 (439)
T ss_dssp -CCCCEEEEEEETTCTTEEECCCCCCSSCTTSCCEEEEEEEEEECGGGEEECCC--CCCGGGHHHHHHHHGGGHHHHHHH
T ss_pred CCCceeEEEEEECCCCCeEECCCcccCCcCCCCceeEEEeeeEcCHHHccCCCCCCchHHHHhhchHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999999999999999997 33 344333333455888999999999
Q ss_pred HHHHHHHHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC------------CCChhHHHHHHH
Q 022503 156 SIGVYDMCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENG------------KMSLGQASLGKA 223 (296)
Q Consensus 156 ~~~~l~~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~~------------~~~~~~~~~~K~ 223 (296)
++++++.+++|++ ++|+.++|.+|++|+++.++++++|++++++++..|.. ......++++|+
T Consensus 271 a~~al~~a~~~a~-----~r~i~~~~~vq~~la~~~~~~~aar~l~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~ak~ 345 (439)
T 3m9v_A 271 AQAAYDTAVAALE-----RRPEPPQAAALTLVAEIDSRLYALRATAGSALTAADALSADLSGDMDERGRQMMRHFQCAKL 345 (439)
T ss_dssp HHHHHHHHHHHHH-----TCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc-----CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhhhHHHHHHHHHH
Confidence 9999999999998 56899999999999999999999999999988877641 011235678899
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCcCcChHHHHhhhcCCcc-cccchHHHHHHHHHHHHhcCcCCCC
Q 022503 224 WVSARARETVALGRELLGGNGIVTDFLVGKAFCDFEPFH-TGEGSYDINNLIAAREITGFASFKP 287 (296)
Q Consensus 224 ~a~~~a~~~~~~~~~~~G~~g~~~~~~l~r~~rd~~~~~-~~~g~~~~~~~~~~~~~l~~~~~~~ 287 (296)
++++.+.++++.++|+|||.||+++++++|+|||++... +++|++++++..+++.++|+|+..+
T Consensus 346 ~a~~~a~~v~~~a~q~~Gg~G~~~~~~l~r~~Rda~~~~~~~~gt~~~~~~~i~~~~lg~~~~~~ 410 (439)
T 3m9v_A 346 AVNRLAPEIVSDCLSLVGGASYTAGHPLARLLRDVQAGRFMQPYAYVDAVDFLSAQALGIERDNN 410 (439)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGGSTTSHHHHHHHHTTGGGTSSSCCHHHHHHHHHHHHTTC-----
T ss_pred HHHHHHHHHHHHHHHHhCHHHhcCCChHHHHHHHHHhhhhhCCCchHHHHHHHHHHHhCCchhHH
Confidence 999999999999999999999999999999999999999 9999999999999999999986543
No 38
>2yyk_A 4-hydroxyphenylacetate-3-hydroxylase; structurome, riken spring-8 center, oxygnase component, 4- hydroxyphenylacetate 3-monooxygenase; 1.60A {Thermus thermophilus} PDB: 2yyl_A* 2yym_A* 2yyi_A* 2yyg_A* 2yyj_A*
Probab=100.00 E-value=2.6e-41 Score=311.48 Aligned_cols=261 Identities=15% Similarity=0.110 Sum_probs=215.6
Q ss_pred CHHHHHHHhHhhhccccceeEEecCCCCC--------CCcCCCeeEEE-EECCEEEEEeEEEeecCCCCCCEEEEEEEeC
Q 022503 9 SEAQKRKYLPSLAQLTTMASWALTEPNHG--------SDASALSTAAT-KVEGGWILEGQKRWIGNSTFADVLVVMARNT 79 (296)
Q Consensus 9 ~~~q~~~~l~~i~~g~~~~~~a~te~~~g--------s~~~~~~~~a~-~~~~g~~l~G~K~~vt~~~~a~~~lv~a~~~ 79 (296)
.+|||++|||++++|++++++++|||+.| ||.. +.++++ +++|||+|||.|.|+|| +.||+++|+++++
T Consensus 122 ~~eqk~~~L~~l~~Ge~~~a~a~TEP~~grs~~~s~gsd~~-~~~~~~~~~gdg~VlnG~K~~iT~-~~Ad~~iV~art~ 199 (481)
T 2yyk_A 122 FAENVRNYYRYLRDQDLATTHALTNPQVNRARPPSGQPDPY-IPVGVVKQTEKGIVVRGARMTATF-PLADEVLIFPSIL 199 (481)
T ss_dssp GHHHHHHHHHHHHHHTCCEEEEECCCCCCTTC----CCCSC-SBCEEEEECSSEEEEEEEEEEEEC-CCSSEEEECCCSC
T ss_pred HHHHHHHHHHHHHcCCeEEEEeeECCCCCCCCCccccCCcc-cceEEEEEECCEEEEEeEEEEecc-ccccEEEEEEecC
Confidence 36999999999999999999999999976 5553 556664 68999999999999999 9999999999985
Q ss_pred C--C--CCeEEEEEeCCCCCeEEee--cccc--------ccccc-ccccceEeeeeeeCCCCCC--CCCC-ChHHh--hh
Q 022503 80 T--T--KKINAFIVKKDAPGLTATK--IENK--------IGLRM-LQNGDILFKKVFVPDEDRL--PGFN-SFQDT--NI 139 (296)
Q Consensus 80 ~--~--~~~~~flv~~~~~Gv~~~~--~~~~--------~g~~~-~~~~~~~f~~v~Vp~~~~l--~~~~-~~~~~--~~ 139 (296)
+ + +++++|+||+++|||++.. .+.. +|.+. .+++++.||||+||++++| |... ++... ..
T Consensus 200 ~~~~~~~~~s~flVp~dtpGv~v~~r~~~~~~~s~~d~~lg~r~~~~~~~v~FddV~VP~e~vl~~G~~~~g~~~~~~~~ 279 (481)
T 2yyk_A 200 LQAGSEKYALAFALPTSTPGLHFVCREALVGGDSPFDHPLSSRVEEMDCLVIFDDVLVPWERVFILGNVELCNNAYGATG 279 (481)
T ss_dssp CCTTCGGGCEEEEEETTCTTEEEEECCCCCCCSCTTTCTTTTTCCCCEEEEEEEEEEEEGGGEEEESCHHHHHHHHHHHT
T ss_pred CCCCCCCeEEEEEEECCCCCEEEEeccccccCCccccccccccCCCCeEEEEEccEEECHHHccCCCCccHHHHHHHHhh
Confidence 2 1 3589999999999999953 3332 45553 6778899999999999998 4432 23333 56
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc---CC--CC
Q 022503 140 PLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCEN---GK--MS 214 (296)
Q Consensus 140 ~~~~~r~~~aa~~~G~~~~~l~~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~---~~--~~ 214 (296)
++..+|+..++..+|.++.+++.+..++.. | +++++|.+|++|++|.++++++|++++++++..|. +. +.
T Consensus 280 ~l~~~r~~~~~~~~g~a~~~lg~a~~~~~~---~--gi~~~q~vq~~laem~~~leaar~l~~~aa~~~d~~~~G~~~~~ 354 (481)
T 2yyk_A 280 ALNHMAHQVVALKTAKTEAFLGVAALMAEG---I--GADVYGHVQEKIAEIIVYLEAMRAFWTRAEEEAKENAYGLLVPD 354 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---T--TGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTSCEECC
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHh---c--ChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCcCcc
Confidence 778899999999999999999999888764 3 39999999999999999999999999999999864 32 34
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcChHHHHhhhcCCcc------cccchHHHHHHHHHHHH
Q 022503 215 LGQASLGKAWVSARARETVALGRELLGGNGIVTDFLVGKAFCDFEPFH------TGEGSYDINNLIAAREI 279 (296)
Q Consensus 215 ~~~~~~~K~~a~~~a~~~~~~~~~~~G~~g~~~~~~l~r~~rd~~~~~------~~~g~~~~~~~~~~~~~ 279 (296)
...++++|+++++.+.++++.++|++||.+++ +|+++.| |.+... ...|.+++++..++|.+
T Consensus 355 ~~~~s~aK~~a~e~a~~v~~~a~qi~Gg~g~~--~p~e~~~-~~~i~~~l~~~l~~~g~~~~~r~~i~rl~ 422 (481)
T 2yyk_A 355 RGALDGARNLYPRLYPRIREILEQIGASGLIT--LPSEKDF-KGPLGPFLEKFLQGAALEAKERVALFRLA 422 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSC--CCCHHHH-HSTTHHHHHHHSCBTTBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccccc--CccHHHh-ChhhhHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 56799999999999999999999999998877 7888888 774433 12388888888888654
No 39
>1u8v_A Gamma-aminobutyrate metabolism dehydratase/isomerase; ALFA-helixes, beta-strands, lyase; HET: FAD; 1.60A {Clostridium aminobutyricum} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=4.9e-41 Score=310.06 Aligned_cols=270 Identities=17% Similarity=0.131 Sum_probs=211.2
Q ss_pred hhhcCC--HHHHHHHhHhhhccccceeEEecCCCCC--------CCc-CCCeeEEEEECCEEEEEeEEEeecCCCCCCEE
Q 022503 4 IATSGS--EAQKRKYLPSLAQLTTMASWALTEPNHG--------SDA-SALSTAATKVEGGWILEGQKRWIGNSTFADVL 72 (296)
Q Consensus 4 l~~~g~--~~q~~~~l~~i~~g~~~~~~a~te~~~g--------s~~-~~~~~~a~~~~~g~~l~G~K~~vt~~~~a~~~ 72 (296)
+..||| ++||++|||++++|++++++++|||+.+ ||. ..+. ++++++|||+|||.|.|+||++.||++
T Consensus 120 ~~~~Gt~~~eqk~~~L~~l~~Ge~~~a~a~TEP~~~rs~~~~~gSD~~~~~~-~a~r~gdg~vlnG~K~~iT~a~~Ad~~ 198 (490)
T 1u8v_A 120 DQKYGTNYHKNFTEYLKYIQENDLIVDGAMTDPKGDRGLAPSAQKDPDLFLR-IVEKREDGIVVRGAKAHQTGSINSHEH 198 (490)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHTCCEEEECCCCCSCTTSCGGGCSSTTSSCE-EEEECSSEEEEEEEECSCTTCTTCSEE
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCceeeeeeeCCCCCCcccccccCCcccceE-EEEEECCEEEEEeEEEEeeCCcccCEE
Confidence 357999 9999999999999999999999999874 564 3333 888999999999999999999999999
Q ss_pred EEEEEeCC----CCCeEEEEEeCCCCCeEEee---cccc----------ccc-cc-ccccceEeeeeeeCCCCCC--CCC
Q 022503 73 VVMARNTT----TKKINAFIVKKDAPGLTATK---IENK----------IGL-RM-LQNGDILFKKVFVPDEDRL--PGF 131 (296)
Q Consensus 73 lv~a~~~~----~~~~~~flv~~~~~Gv~~~~---~~~~----------~g~-~~-~~~~~~~f~~v~Vp~~~~l--~~~ 131 (296)
+|+++++. .++.++|+||+++|||++.+ .+.+ +|+ +. .++++++||||+||++++| |..
T Consensus 199 iV~art~~~~~~~~~~s~flVp~d~pGv~v~~~r~~~~~~~~~~~~d~~lg~~r~~~~~~~v~FddV~VP~e~vl~~g~~ 278 (490)
T 1u8v_A 199 IIMPTIAMTEADKDYAVSFACPSDADGLFMIYGRQSCDTRKMEEGADIDLGNKQFGGQEALVVFDNVFIPNDRIFLCQEY 278 (490)
T ss_dssp EECCSSCCCGGGGGGCEEEEEETTCTTEEEEECCCTTGGGGGSTTCCGGGSSSSCCCCCEEEEEEEEEEEGGGEEEESCG
T ss_pred EEEEecCCCCCCCCeEEEEEEECCCCCEEEEecccccccccccccccCCccccccCCceEEEEECceEeCHHHccCCCCh
Confidence 99998742 13478999999999999954 3433 555 53 5678899999999999998 444
Q ss_pred -CChHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 022503 132 -NSFQDTNIPLSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCEN 210 (296)
Q Consensus 132 -~~~~~~~~~~~~~r~~~aa~~~G~~~~~l~~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~ 210 (296)
.++......+...|+.++++++|.+..++..+...... || ++++|.+|++|++|.++++++|++++++++..|.
T Consensus 279 ~~g~~~~~~~~~~~r~~~~a~~~~~~~~~lG~a~~~~~~---~g--i~~~q~vq~~laem~~~leaar~l~~~aa~~~d~ 353 (490)
T 1u8v_A 279 DFAGMMVERFAGYHRQSYGGCKVGVGDVVIGAAALAADY---NG--AQKASHVKDKLIEMTHLNETLYCCGIACSAEGYP 353 (490)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HT--CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cC--chhcHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 34555566677788877777666666666665543322 33 8999999999999999999999999999998864
Q ss_pred ---CC--CChhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcChHHHHhhhc-----------------CCcccccchH
Q 022503 211 ---GK--MSLGQASLGKAWVSARARETVALGRELLGGNGIVTDFLVGKAFCDF-----------------EPFHTGEGSY 268 (296)
Q Consensus 211 ---~~--~~~~~~~~~K~~a~~~a~~~~~~~~~~~G~~g~~~~~~l~r~~rd~-----------------~~~~~~~g~~ 268 (296)
+. +....++++|+++++.+.++++.++|++||.|++ +|+++.|||. ........+.
T Consensus 354 ~~~g~~~~~~~~~s~aK~~a~e~a~~v~~~a~qi~Gg~g~~--~p~er~~rd~~~~~~~~~~~~~~l~~~~~g~~~~~~~ 431 (490)
T 1u8v_A 354 TAAGNYQIDLLLANVCKQNITRFPYEIVRLAEDIAGGLMVT--MPSEADFKSETVVGRDGETIGDFCNKFFAAAPTCTTE 431 (490)
T ss_dssp CTTSCEECCHHHHHHHHHHHTTHHHHHHHHHHHHHCTHHHH--CCCHHHHTCCCBCSTTSCBHHHHHHHHTCCSTTSCHH
T ss_pred cccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhc--ChHHHHHhCchhccccchhHHHHHHHHhCCCCCCCHH
Confidence 22 3456789999999999999999999999999998 4555555554 4444344444
Q ss_pred HHHHHH-HHHHHhc
Q 022503 269 DINNLI-AAREITG 281 (296)
Q Consensus 269 ~~~~~~-~~~~~l~ 281 (296)
+.++.. +++.+.+
T Consensus 432 dr~~~~rl~~~~~~ 445 (490)
T 1u8v_A 432 ERMRVLRFLENICL 445 (490)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 555444 6665544
No 40
>3hwc_A Chlorophenol-4-monooxygenase component 2; beta barrel, helix bundle, oxidoreductase; 2.50A {Burkholderia cepacia}
Probab=100.00 E-value=5.3e-36 Score=276.05 Aligned_cols=235 Identities=13% Similarity=0.129 Sum_probs=183.6
Q ss_pred cCC--HHHHHHHhHhhhccccceeEEecCCCC--------CCCcCCCeeEEEEECCEEEEEeEEEeecCCCCCCEEEEEE
Q 022503 7 SGS--EAQKRKYLPSLAQLTTMASWALTEPNH--------GSDASALSTAATKVEGGWILEGQKRWIGNSTFADVLVVMA 76 (296)
Q Consensus 7 ~g~--~~q~~~~l~~i~~g~~~~~~a~te~~~--------gs~~~~~~~~a~~~~~g~~l~G~K~~vt~~~~a~~~lv~a 76 (296)
+|+ .+|+++|||.+++|++++++++|||+. |||. .+.+ +++++|||+|||.|.|+||+..||+++|++
T Consensus 127 ~~~~~~eq~~~~L~~l~~Ge~~~a~AltEP~~~rs~~~~~GSD~-~~~~-~~~~gdg~VlnG~K~~iT~a~~Ad~~lV~a 204 (515)
T 3hwc_A 127 EGRNLTQNIHNFLKLLREKDLNCPLNFVDPQTDRSSDAAQARSP-NLRI-VEKTDDGIIVNGVKAVGTGIAFGDYMHIGC 204 (515)
T ss_dssp TTCCHHHHHHHHHHHHHHTTCCCCEECCCCCCCCCSCTTTSCCS-BCEE-EEECSSEEEEEEEEEEEESGGGCSEEEECC
T ss_pred cCCCHHHHHHHHHHHHHcCCcEEEEEeeCCCCCcccccccCCCc-ceEE-EEEECCEEEEEEEEEEECCccccCEEEEEE
Confidence 665 678999999999999999999999986 4676 4443 345689999999999999999999999999
Q ss_pred Ee-CCC--CCeEEEEEeCCCCCeEEeeccccccc-----cc-----ccccceEeeeeeeCCCCCC--CCC-CChHHhhhh
Q 022503 77 RN-TTT--KKINAFIVKKDAPGLTATKIENKIGL-----RM-----LQNGDILFKKVFVPDEDRL--PGF-NSFQDTNIP 140 (296)
Q Consensus 77 ~~-~~~--~~~~~flv~~~~~Gv~~~~~~~~~g~-----~~-----~~~~~~~f~~v~Vp~~~~l--~~~-~~~~~~~~~ 140 (296)
++ ++. +.+++|+||.++|||++...|...|. +. ..++++.||||+||++++| |.. .++..+...
T Consensus 205 ~t~~~~~~~~~s~FlVp~d~pGv~v~~~~~~~G~~~~d~~ls~~~~~~~a~v~FddV~VP~e~vl~~Ge~g~g~~~~~~~ 284 (515)
T 3hwc_A 205 LYRPGIPGEQVIFAAIPTNTPGVTVFCRESTVKNDPAEHPLASQGDELDSTTVFDNVFIPWEQVFHIGNPEHAKLYPQRI 284 (515)
T ss_dssp CCCTTCCGGGCEEEEEETTCTTEEEEECCCCCCSCTTTCTTTTSCCCCEEEEEEEEEEEEGGGEEEESCTTGGGTHHHHH
T ss_pred EecCCCCCCeEEEEEEECCCCCeEEeecccccCccccccccccccCCceEEEEECceEECHHHccCCCCccHHHHHHHHH
Confidence 97 321 23899999999999999877766652 22 2378899999999999999 555 355444333
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc---CC--CCh
Q 022503 141 LSVARVMVAWQTIGISIGVYDMCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCEN---GK--MSL 215 (296)
Q Consensus 141 ~~~~r~~~aa~~~G~~~~~l~~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~---~~--~~~ 215 (296)
+...+....+..+|.+..++..+..++. .|| ++++|.+|++|++|.+.++++|++++++++..+. +. +..
T Consensus 285 ~~~~~r~~~~~~~~~a~~~lG~A~~~~e---~~g--I~~fQ~Vq~kLAem~~~lEaaR~l~~~Aa~~~d~~~~G~~~p~~ 359 (515)
T 3hwc_A 285 FDWVHYHILIRQVLRAELIVGLAILITE---HIG--TSKLPTVSARVAKLVAFHLAMQAHLIASEETGFHTKGGRYKPNP 359 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHT--CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTCCEECCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HcC--CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCH
Confidence 3333222223445555555555544443 233 9999999999999999999999999999998775 32 456
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcCc
Q 022503 216 GQASLGKAWVSARARETVALGRELLGGNGIVTD 248 (296)
Q Consensus 216 ~~~~~~K~~a~~~a~~~~~~~~~~~G~~g~~~~ 248 (296)
..++++|+++++.+.++++.++|++||.+++..
T Consensus 360 ~~as~AK~~ase~~~rv~~~a~qi~GG~~i~~P 392 (515)
T 3hwc_A 360 LIYDFGRAHFLQNQMSVMYELLDLAGRSSLMIP 392 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGGTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCeeeCC
Confidence 679999999999999999999999999999843
No 41
>4g5e_A 2,4,6-trichlorophenol 4-monooxygenase; oxidoreductase; 2.50A {Cupriavidus necator JMP134}
Probab=99.97 E-value=1e-29 Score=234.52 Aligned_cols=232 Identities=13% Similarity=0.084 Sum_probs=187.4
Q ss_pred HHHHHHhHhhhccccceeEEecCCCCC-----CCcCCCee-EEEEECCEEEEEeEEEeecCCCCCCEEEEEEEeCCC---
Q 022503 11 AQKRKYLPSLAQLTTMASWALTEPNHG-----SDASALST-AATKVEGGWILEGQKRWIGNSTFADVLVVMARNTTT--- 81 (296)
Q Consensus 11 ~q~~~~l~~i~~g~~~~~~a~te~~~g-----s~~~~~~~-~a~~~~~g~~l~G~K~~vt~~~~a~~~lv~a~~~~~--- 81 (296)
+....|+..+.++++..+.++|+|... +....+.. ..++++|||+|||.|.|+||++.||+++|++++.+.
T Consensus 134 ~n~~~y~~~~~~~DL~~~~a~~dPk~dRs~~~~~q~d~~l~Vve~~~dGiVVnGaK~~~T~a~~Ad~i~V~a~t~~~~~~ 213 (517)
T 4g5e_A 134 KNIVDFVNFAKKHDLNCAPQFVDPQMDRSNPDAQQRSPGLRVIEKNDKGIVVSGVKAIGTGVAFADWIHIGVFFRPGIPG 213 (517)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCCCC-----------CBCEEEEECSSEEEEEEEEEEEESGGGCSEEEECCCCCTTCCG
T ss_pred HHHHHHHHHHHhcCceeeeeeeCCCCCCCCCchhcCCCceEEEEEcCCeEEEeeEehhhcCccccCEEEEEeecCCCCCc
Confidence 556789999999999999999999642 11111222 455688999999999999999999999999987543
Q ss_pred CCeEEEEEeCCCCCeEEeeccccccccccc----------ccceEeeeeeeCCCCCC--CCCC-ChHHhhhhhhHHHHHH
Q 022503 82 KKINAFIVKKDAPGLTATKIENKIGLRMLQ----------NGDILFKKVFVPDEDRL--PGFN-SFQDTNIPLSVARVMV 148 (296)
Q Consensus 82 ~~~~~flv~~~~~Gv~~~~~~~~~g~~~~~----------~~~~~f~~v~Vp~~~~l--~~~~-~~~~~~~~~~~~r~~~ 148 (296)
++.++|+||.++|||++...+...+.+..+ .+.+.||||+||++++| |.+. ++......+...|...
T Consensus 214 d~~~~F~VP~dtPGv~~i~r~~~~~~~~~d~pl~~r~~e~da~vvFDdV~VP~e~Vf~~Ge~~~~~~~~~~~~~~~~~~~ 293 (517)
T 4g5e_A 214 DQIIFAATPVNTPGVTIVCRESVVKEDPIEHPLASQGDELDGMTVFDNVFIPWSHVFHLGNPEHAKLYPQRVFDWLHYHA 293 (517)
T ss_dssp GGCEEEEEETTCTTEEEEECCCCCCSCTTTCTTGGGCCCCEEEEEEEEEEEEGGGEEEESCTTHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEEecCCCCeEEEecccccCCCccccccccccCCcceEEEecceeccHHHccccCChhHHHHHHHHHHHHHHHHH
Confidence 457899999999999997665554443322 36799999999999998 5543 4566677788888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc---C--CCChhHHHHHHH
Q 022503 149 AWQTIGISIGVYDMCYRYLMERKQFGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCEN---G--KMSLGQASLGKA 223 (296)
Q Consensus 149 aa~~~G~~~~~l~~~~~~~~~r~~~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~---~--~~~~~~~~~~K~ 223 (296)
++..+|.++.++..+..+++.. | +.++|++|++|++|.+.+|+++++++.++..... + .+....++++|+
T Consensus 294 ~~~~~~~~~~~~g~a~~~ae~~---G--i~~fq~Vq~kLaEm~~~~E~~ral~~aaa~~a~~~~~G~~~P~~~~a~~aK~ 368 (517)
T 4g5e_A 294 LIRQSVRAELMAGLAILITEHI---G--TNKIPAVQTRVAKLIGFHQAMLAHIVASEELGFHTPGGAYKPNILIYDFGRA 368 (517)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH---T--CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTCCEECCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh---C--CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcCcCHHHHHHHHH
Confidence 8889999999999888888643 2 8999999999999999999999999988775332 2 255678899999
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCcC
Q 022503 224 WVSARARETVALGRELLGGNGIVT 247 (296)
Q Consensus 224 ~a~~~a~~~~~~~~~~~G~~g~~~ 247 (296)
++++...+++..++|++||.|++-
T Consensus 369 ~a~~~~~rv~~eaiqi~GG~g~~~ 392 (517)
T 4g5e_A 369 LYLENFSQMIYELVDLSGRSALIF 392 (517)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTTCC
T ss_pred HHHHHHHHHHHHHHHHhCCccccC
Confidence 999999999999999999999984
No 42
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=95.31 E-value=0.15 Score=47.91 Aligned_cols=110 Identities=14% Similarity=0.089 Sum_probs=82.8
Q ss_pred hCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCC-hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcCh
Q 022503 173 FGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCEN-GKMS-LGQASLGKAWVSARARETVALGRELLGGNGIVTDFL 250 (296)
Q Consensus 173 ~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~-~~~~-~~~~~~~K~~a~~~a~~~~~~~~~~~G~~g~~~~~~ 250 (296)
+|+.+.+.|.+..+++|+.++++++.+.+.++...+.. +.+. .....+++.|+.+...++-..+.++. ..+.++..
T Consensus 482 ~~~~~~~~q~~l~~~ad~~~~~y~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 559 (597)
T 3owa_A 482 YGKALDKEQEILVNIADIVSNLYAMESAVLRTEKAIKTTGLEKNKQKVLYTEVFCQEAFNEIEAHAKETL--IAVENGDM 559 (597)
T ss_dssp HGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSGGGHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHCCHHH
T ss_pred hCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHH--HhhccchH
Confidence 57889999999999999999999999999999998875 5443 56788999999999999999998888 45555555
Q ss_pred HHHHhhhcCCcccccc-hHHHHHHHHHHHHhcCcC
Q 022503 251 VGKAFCDFEPFHTGEG-SYDINNLIAAREITGFAS 284 (296)
Q Consensus 251 l~r~~rd~~~~~~~~g-~~~~~~~~~~~~~l~~~~ 284 (296)
+...+..++-+.-... .....+..|++.++....
T Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 594 (597)
T 3owa_A 560 LRMMLSSLRKLTRHTPLNVIPKKREIAAKILEDER 594 (597)
T ss_dssp HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHccC
Confidence 5444444443333333 335567788887765443
No 43
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=90.37 E-value=8.5 Score=36.04 Aligned_cols=98 Identities=15% Similarity=0.056 Sum_probs=72.9
Q ss_pred hCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCh-hHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcChH
Q 022503 173 FGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSL-GQASLGKAWVSARARETVALGRELLGGNGIVTDFLV 251 (296)
Q Consensus 173 ~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~~~~K~~a~~~a~~~~~~~~~~~G~~g~~~~~~l 251 (296)
.+..+.+.+.+..+|+++...++.+.+.+.++.+.++.+.+.. ....+++.|+.+...++-..+.++..+.
T Consensus 506 ~~~~~~~~~~~~~rl~d~~~~~y~~~~~l~r~~~~~~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-------- 577 (607)
T 2uxw_A 506 HKKGIVNEQFLLQRLADGAIDLYAMVVVLSRASRSLSEGHPTAQHEKMLCDTWCIEAAARIREGMAALQSDP-------- 577 (607)
T ss_dssp HGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTCT--------
T ss_pred hCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------
Confidence 4678888999999999999999999999999988777665543 4578899999888888877777632210
Q ss_pred HHHhhhcCCcccccchHHHHHHHHHHHHhcCcCCCCCCc
Q 022503 252 GKAFCDFEPFHTGEGSYDINNLIAAREITGFASFKPTSS 290 (296)
Q Consensus 252 ~r~~rd~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~ 290 (296)
...+.+.....|++.++....+..+.|
T Consensus 578 ------------~~~~~~~~~~~ia~~~~~~~~y~~~~p 604 (607)
T 2uxw_A 578 ------------WQQELYRNFKSISKALVERGGVVTSNP 604 (607)
T ss_dssp ------------THHHHHHHHHHHHHHHHHHTSCCSCCT
T ss_pred ------------CCCChHHHHHHHHHHHHHcCCEeccCC
Confidence 012345667788888877766655544
No 44
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=81.89 E-value=32 Score=31.79 Aligned_cols=104 Identities=16% Similarity=0.102 Sum_probs=74.6
Q ss_pred hCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcCh--
Q 022503 173 FGAPLAAFQITQQKLAQMLGNIQAMNLVGWRLCRMCENGKMSLGQASLGKAWVSARARETVALGRELLGGNGIVTDFL-- 250 (296)
Q Consensus 173 ~~~~~~~~~~~q~~l~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~K~~a~~~a~~~~~~~~~~~G~~g~~~~~~-- 250 (296)
++..+.+.|.+..+++++.+.++.+++.+.++.+. .+. ...++++|+.+...++...+.+++-+ +.++.|
T Consensus 468 ~~~~l~~~q~~l~~lad~~~~~~~~~~~l~r~~~~--~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 539 (577)
T 2z1q_A 468 YGQGVEEEQEVLGAVADILIDAYAAESALLRARRL--GGL----APVLARIYLAQALDRAQAGALSVLPR--LVEGDEAR 539 (577)
T ss_dssp HGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHH--CTT----HHHHHHHHHHHHHHHHHHHHHHHGGG--TCCTTTTH
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCc----HHHHHHHHHHHHHHHHHHHHHHHHHH--HHcCCchh
Confidence 35667677899999999999999999999888765 222 78889999999999988887776633 333322
Q ss_pred -HHHHhhhcCCcccccchHHHHHHHHHHHHhcCcCCC
Q 022503 251 -VGKAFCDFEPFHTGEGSYDINNLIAAREITGFASFK 286 (296)
Q Consensus 251 -l~r~~rd~~~~~~~~g~~~~~~~~~~~~~l~~~~~~ 286 (296)
+...+|.. ......+++.+...|++.++....+.
T Consensus 540 ~~~~~~~~~--~~~~~~~~~~~~~~ia~~~~~~~~y~ 574 (577)
T 2z1q_A 540 VVYSAARRL--TKREPGDLVALRRQAAEAVLEAGGYP 574 (577)
T ss_dssp HHHHHHHHH--TCCCCCCHHHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHh--cccCCCChHHHHHHHHHHHHhcCCcC
Confidence 22233333 23345567888889999988765543
No 45
>1l6x_B Minimized B-domain of protein A Z34C; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: k.13.1.1 PDB: 1oqo_C* 1oqx_C* 1zdc_A 1zdd_A
Probab=21.02 E-value=59 Score=17.39 Aligned_cols=14 Identities=21% Similarity=0.363 Sum_probs=11.7
Q ss_pred CHHHHHHHhHhhhc
Q 022503 9 SEAQKRKYLPSLAQ 22 (296)
Q Consensus 9 ~~~q~~~~l~~i~~ 22 (296)
|++||..|+..|.+
T Consensus 19 tEeQrn~yI~slkd 32 (34)
T 1l6x_B 19 NEEQRNAKIKSIRD 32 (34)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHhHHHHHhc
Confidence 68999999988754
Done!