BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022509
(296 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9H6Y7|RN167_HUMAN E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens GN=RNF167 PE=1
SV=1
Length = 350
Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 71/161 (44%), Gaps = 35/161 (21%)
Query: 18 AISFISLLAMSAVLATCFFVRRHRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVED 77
I + +LAM AV+ R R++R RL K I T +
Sbjct: 179 GIVGLLVLAMGAVMIARCIQHRKRLQRN---------------RLTKEQLKQIPTHDYQK 223
Query: 78 NCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKR---------- 127
CAICL++Y G+KLR+LPC H +H+ CVD WLT R CP+CK+
Sbjct: 224 GDQYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDED 283
Query: 128 -------DARTSTGEP---PASESTPLLSSSPASSSILSSI 158
GEP PASE TPLL SSP + S+
Sbjct: 284 QEEETQGQEEGDEGEPRDHPASERTPLLGSSPTLPTSFGSL 324
>sp|Q91XF4|RN167_MOUSE E3 ubiquitin-protein ligase RNF167 OS=Mus musculus GN=Rnf167 PE=2
SV=1
Length = 347
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 69/161 (42%), Gaps = 35/161 (21%)
Query: 18 AISFISLLAMSAVLATCFFVRRHRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVED 77
I + +LAM VL R R++R RL K I T +
Sbjct: 179 GIVGLLVLAMGTVLIVRCIQHRKRLQRN---------------RLTKEQLKQIPTHDYQK 223
Query: 78 NCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG--- 134
CAICL++Y G+KLR+LPC H +H+ CVD WLT R CP+CK+ G
Sbjct: 224 GDEYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEE 283
Query: 135 -----------------EPPASESTPLLSSSPASSSILSSI 158
+ PASE TPLL SSP + S+
Sbjct: 284 QEEETQEQEEGDEGEPRDQPASEWTPLLGSSPTLPTSFGSL 324
>sp|Q06003|GOLI_DROME Protein goliath OS=Drosophila melanogaster GN=gol PE=2 SV=3
Length = 461
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 3/144 (2%)
Query: 6 IPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRREAPRASRGREFHGMSRRLVKA 65
I S ++ ++ISFI L+ +S V ++++R R + + SR ++++ +
Sbjct: 227 ISSLNRTSVLFVSISFIVLMIISLVWLIFYYIQRFRYMQAKDQQSRN--LCSVTKKAIMK 284
Query: 66 MPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVC 125
+P+ E + S CAIC+E Y + +RILPC+H+FH C+D WL RT CP+C
Sbjct: 285 IPTKTGKFSDEKDLDSDCCAICIEAYKPTDTIRILPCKHEFHKNCIDPWLIEHRT-CPMC 343
Query: 126 KRDARTSTGEPPASESTPLLSSSP 149
K D G +L P
Sbjct: 344 KLDVLKFYGYVFLGSEESILEYQP 367
>sp|Q5XIL0|RN167_RAT E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus GN=Rnf167
PE=2 SV=1
Length = 349
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 66/153 (43%), Gaps = 36/153 (23%)
Query: 18 AISFISLLAMSAVLATCFFVRRHRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVED 77
I + +LAM VL R R++R RL K I T +
Sbjct: 179 GIVGLLVLAMGTVLIVRCIQHRKRLQRN---------------RLTKEQLKQIPTHDYQK 223
Query: 78 NCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG--- 134
CAICL++Y G+KLRILPC H +H+ CVD WLT R CP+CK+ G
Sbjct: 224 GDEYDVCAICLDEYEDGDKLRILPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEE 283
Query: 135 ------------------EPPASESTPLLSSSP 149
+ PASE TPLL SSP
Sbjct: 284 QEEETQGQEEEGDEGEPRDQPASEWTPLLGSSP 316
>sp|Q9ULK6|RN150_HUMAN RING finger protein 150 OS=Homo sapiens GN=RNF150 PE=2 SV=2
Length = 438
Score = 78.2 bits (191), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 86/186 (46%), Gaps = 13/186 (6%)
Query: 17 MAISFISLLAMSAVLATCFFVRRHRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVE 76
++ISFI L+ +S ++++R R R R R + + K I E
Sbjct: 212 VSISFIVLMIISLAWLVFYYIQRFRYANARDRNQR-RLGDAAKKAISKLQIRTIKKGDKE 270
Query: 77 DNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGEP 136
CA+C+E Y + +RILPCRH FH CVD WL RT CP+CK + + G P
Sbjct: 271 TESDFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRT-CPMCKMNILKALGIP 329
Query: 137 PASESTPLLSSS-------PASSSILSSIRSSLASSSALHIPPSMSHSPSVSHIHSVAST 189
P ++ L + P ++ I + +++ SS + + P++ +V + V T
Sbjct: 330 PNADCMDDLPTDFEGSLGGPPTNQITGASDTTVNESS-VTLDPAVR---TVGALQVVQDT 385
Query: 190 PYIPQS 195
IPQ
Sbjct: 386 DPIPQE 391
>sp|Q66HG0|RNF13_RAT E3 ubiquitin-protein ligase RNF13 OS=Rattus norvegicus GN=Rnf13
PE=2 SV=1
Length = 380
Score = 77.8 bits (190), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 55/102 (53%), Gaps = 14/102 (13%)
Query: 83 TCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG-------- 134
CAICLE+Y G+KLRILPC H +H CVD WLT + CPVCK+ S G
Sbjct: 239 VCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDS 298
Query: 135 ---EPPASESTPLLSSSPASSSILSSIRSSLASSSALHIPPS 173
E SE TPLL P S+S + SL+ S + H+ S
Sbjct: 299 SQEENQVSEHTPLL---PPSASARTQSFGSLSESHSHHMTES 337
>sp|O54965|RNF13_MOUSE E3 ubiquitin-protein ligase RNF13 OS=Mus musculus GN=Rnf13 PE=1
SV=2
Length = 381
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 53/98 (54%), Gaps = 14/98 (14%)
Query: 83 TCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG-------- 134
CAICLE+Y G+KLRILPC H +H CVD WLT + CPVCK+ S G
Sbjct: 239 VCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDS 298
Query: 135 ---EPPASESTPLLSSSPASSSILSSIRSSLASSSALH 169
E SE TPLL P S+S + SL+ S + H
Sbjct: 299 SQEENQVSEHTPLL---PPSASARTQSFGSLSESHSHH 333
>sp|Q90972|RNF13_CHICK E3 ubiquitin-protein ligase RNF13 OS=Gallus gallus GN=RNF13 PE=1
SV=1
Length = 381
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 43/74 (58%), Gaps = 11/74 (14%)
Query: 83 TCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG-------- 134
CAICL++Y G+KLRILPC H +H CVD WLT + CPVCK+ S G
Sbjct: 239 VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSETDS 298
Query: 135 ---EPPASESTPLL 145
E SE+TPLL
Sbjct: 299 SQEENEVSENTPLL 312
>sp|Q0VD51|RNF13_BOVIN E3 ubiquitin-protein ligase RNF13 OS=Bos taurus GN=RNF13 PE=2 SV=1
Length = 380
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 50/93 (53%), Gaps = 15/93 (16%)
Query: 83 TCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG-------- 134
CAICL++Y G+KLRILPC H +H CVD WLT + CPVCK+ S G
Sbjct: 239 VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDS 298
Query: 135 ---EPPASESTPLL----SSSPASSSILSSIRS 160
E SE TPLL S+S S LS RS
Sbjct: 299 SQEENEVSEHTPLLRPLASASTQSFGALSESRS 331
>sp|Q5DTZ6|RN150_MOUSE RING finger protein 150 OS=Mus musculus GN=Rnf150 PE=2 SV=2
Length = 437
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query: 17 MAISFISLLAMSAVLATCFFVRRHRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVE 76
++ISFI L+ +S ++++R R R R R + + K I E
Sbjct: 211 VSISFIVLMIISLAWLVFYYIQRFRYANARDRNQR-RLGDAAKKAISKLQVRTIRKGDKE 269
Query: 77 DNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGEP 136
CA+C+E Y + +RILPCRH FH CVD WL RT CP+CK + + G P
Sbjct: 270 TESDFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRT-CPMCKMNILKALGIP 328
Query: 137 PASE 140
P ++
Sbjct: 329 PNAD 332
>sp|Q5RCV8|RNF13_PONAB E3 ubiquitin-protein ligase RNF13 OS=Pongo abelii GN=RNF13 PE=2
SV=1
Length = 381
Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 42/74 (56%), Gaps = 11/74 (14%)
Query: 83 TCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG-------- 134
CAICL++Y G+KLRILPC H +H CVD WLT + CPVCK+ S G
Sbjct: 239 VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDS 298
Query: 135 ---EPPASESTPLL 145
E +E TPLL
Sbjct: 299 SQEENEVTEHTPLL 312
>sp|O43567|RNF13_HUMAN E3 ubiquitin-protein ligase RNF13 OS=Homo sapiens GN=RNF13 PE=1
SV=1
Length = 381
Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 42/74 (56%), Gaps = 11/74 (14%)
Query: 83 TCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG-------- 134
CAICL++Y G+KLRILPC H +H CVD WLT + CPVCK+ S G
Sbjct: 239 VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDS 298
Query: 135 ---EPPASESTPLL 145
E +E TPLL
Sbjct: 299 SQEENEVTEHTPLL 312
>sp|Q6NRX0|RN149_XENLA E3 ubiquitin-protein ligase RNF149 OS=Xenopus laevis GN=rnf149 PE=2
SV=1
Length = 397
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 23/128 (17%)
Query: 17 MAISFISLLAMSAVLATCFFVRR----------HRIRREAPRASRGREFHGMSRRLVKAM 66
+AI+FI+++ +S ++++R R+E +A + H R+ K
Sbjct: 199 VAIAFITMMIISLAWLIFYYIQRFLYTGAQCGNQSNRKETKKAISQLQLH----RVKKGE 254
Query: 67 PSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCK 126
+ + + CA+C+E+Y + +RILPC+H FH C+D WL RT CP+CK
Sbjct: 255 KGI--------DIDAENCAVCIENYKTKDLVRILPCKHIFHRLCIDPWLIEHRT-CPMCK 305
Query: 127 RDARTSTG 134
D + G
Sbjct: 306 LDVIKALG 313
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 10/131 (7%)
Query: 12 SAWSIMAIS----FISLLAMSAVLATCFFVRRHRIRREAPRASRGREFHGMSRRLVKAMP 67
SA SI+AI FISL +S L F+ R I R G+ + ++++ P
Sbjct: 47 SADSIIAIVVLAIFISLGMVSCCLHCIFY--REEIGAAGQDVLHSRARRGLEKEVIESFP 104
Query: 68 SLIFTAV--VEDNCTSRTCAICLEDYSVGEKLRILP-CRHKFHAFCVDSWLTSWRTFCPV 124
+ +++ V ++ CAICL ++ E LR +P C H FHA C+D WL+SW T CPV
Sbjct: 105 TFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWST-CPV 163
Query: 125 CKRDARTSTGE 135
C+ + GE
Sbjct: 164 CRANLSLKPGE 174
>sp|Q3U2C5|RN149_MOUSE E3 ubiquitin-protein ligase RNF149 OS=Mus musculus GN=Rnf149 PE=2
SV=3
Length = 394
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 74/142 (52%), Gaps = 8/142 (5%)
Query: 17 MAISFISLLAMSAVLATCFFVRRHRIRREAPRASRGREFHGMSRRLVKAMP-SLIFTAVV 75
+AI+FI+++ +S ++++R + R+ +++++ +P +
Sbjct: 200 VAIAFITMMIISLAWLIFYYIQRFLYTGSQFGSQNHRK---ETKKVIGQLPLHTVKHGEK 256
Query: 76 EDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRD---ARTS 132
+ + CA+C+E++ V + +RILPC+H FH C+D WL RT CP+CK D A
Sbjct: 257 GIDVDAENCAVCIENFKVKDVIRILPCKHIFHRICIDPWLLDHRT-CPMCKLDVIKALGY 315
Query: 133 TGEPPASESTPLLSSSPASSSI 154
G+P ++ P ++P S+
Sbjct: 316 WGDPEDTQELPTPEAAPGRVSV 337
>sp|Q566M8|RN150_DANRE RING finger protein 150 OS=Danio rerio GN=rnf150 PE=2 SV=1
Length = 419
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 2/124 (1%)
Query: 17 MAISFISLLAMSAVLATCFFVRRHRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVE 76
++ISFI L+ +S ++++R R R R R + + + I E
Sbjct: 201 VSISFIILMIISLAWLVFYYIQRFRYANARDRNQR-RLGDAAKKAISQLQVRTIRKGDQE 259
Query: 77 DNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGEP 136
CA+C+E Y + +RILPCRH FH CVD WL RT CP+CK + + G
Sbjct: 260 TESDFDNCAVCIEGYKPNDVVRILPCRHLFHKCCVDPWLVDHRT-CPMCKMNILKALGLT 318
Query: 137 PASE 140
++E
Sbjct: 319 SSAE 322
>sp|Q8NC42|RN149_HUMAN E3 ubiquitin-protein ligase RNF149 OS=Homo sapiens GN=RNF149 PE=2
SV=2
Length = 400
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 16/142 (11%)
Query: 17 MAISFISLLAMSAVLATCFFVRRH-----RIRREAPRASRGREFHGMSRRLVKAMPSLIF 71
+AI+FI+++ +S ++++R +I ++ R + + VK I
Sbjct: 204 VAIAFITMMIISLAWLIFYYIQRFLYTGSQIGSQSHRKETKKVIGQLLLHTVKHGEKGI- 262
Query: 72 TAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRD--- 128
+ + CA+C+E++ V + +RILPC+H FH C+D WL RT CP+CK D
Sbjct: 263 ------DVDAENCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRT-CPMCKLDVIK 315
Query: 129 ARTSTGEPPASESTPLLSSSPA 150
A GEP + P S P
Sbjct: 316 ALGYWGEPGDVQEMPAPESPPG 337
>sp|Q08CG8|RNF44_DANRE RING finger protein 44 OS=Danio rerio GN=rnf44 PE=2 SV=1
Length = 448
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
Query: 57 GMSRRLVKAMPSLIFTAVVEDNCTSRT-CAICLEDYSVGEKLRILPCRHKFHAFCVDSWL 115
G+++ ++ +PS F +E++ + +T C +C D+ + LR+LPC H+FHA CVD WL
Sbjct: 370 GLTKADIEQLPSYRFN--LENHQSEQTLCVVCFSDFESRQLLRVLPCNHEFHAKCVDKWL 427
Query: 116 TSWRTFCPVCKRDA 129
+ RT CP+C+ DA
Sbjct: 428 KTNRT-CPICRADA 440
>sp|Q9LT17|BBR_ARATH E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana
GN=BBR PE=2 SV=1
Length = 340
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 24/125 (19%)
Query: 12 SAWSIM---AISFISLLAMSAVLATCFFVRRHRIRREAPRASRGREFHGMSRRLVKAMPS 68
AW M +S+ LLA+ ++ T E G+S + ++PS
Sbjct: 233 DAWDEMDPDELSYEELLALGDIVGT--------------------ESRGLSADTIASLPS 272
Query: 69 LIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRD 128
+ N T+ +C IC DY E L +LPC+H +H+ C+++WL CPVC +
Sbjct: 273 KRYKEGDNQNGTNESCVICRLDYEDDEDLILLPCKHSYHSECINNWL-KINKVCPVCSAE 331
Query: 129 ARTST 133
TST
Sbjct: 332 VSTST 336
>sp|O22755|ATL44_ARATH RING-H2 finger protein ATL44 OS=Arabidopsis thaliana GN=ATL44 PE=2
SV=1
Length = 185
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 67/120 (55%), Gaps = 14/120 (11%)
Query: 15 SIMAISFISLLAMSAVLATCFFVRRHRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAV 74
S + + I + ++AV+ C ++RR ++P ++G + ++ ++++P FTA
Sbjct: 33 SALLCALICVAGLAAVV-RCAWLRRFTAGGDSPSPNKG-----LKKKALQSLPRSTFTAA 86
Query: 75 ------VEDNCTSRTCAICLEDYSVGEKLRILP-CRHKFHAFCVDSWLTSWRTFCPVCKR 127
+ S CAICL D++ GE++R+LP C H FH C+D WL S R+ CP C+R
Sbjct: 87 ESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVS-RSSCPSCRR 145
>sp|Q4V7B8|RNF44_RAT RING finger protein 44 OS=Rattus norvegicus GN=Rnf44 PE=2 SV=1
Length = 350
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 57 GMSRRLVKAMPSLIFTAVVEDNCTSRT-CAICLEDYSVGEKLRILPCRHKFHAFCVDSWL 115
G+++ ++ +PS F + + + +T C +C D+ V + LR+LPC H+FHA CVD WL
Sbjct: 272 GLTKADIEQLPSYRFNP--DSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWL 329
Query: 116 TSWRTFCPVCKRDA 129
+ RT CP+C+ DA
Sbjct: 330 KANRT-CPICRADA 342
>sp|Q3UHJ8|RNF44_MOUSE RING finger protein 44 OS=Mus musculus GN=Rnf44 PE=2 SV=1
Length = 407
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 57 GMSRRLVKAMPSLIFTAVVEDNCTSRT-CAICLEDYSVGEKLRILPCRHKFHAFCVDSWL 115
G+++ ++ +PS F + + + +T C +C D+ V + LR+LPC H+FHA CVD WL
Sbjct: 329 GLTKADIEQLPSYRFNP--DSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWL 386
Query: 116 TSWRTFCPVCKRDA 129
+ RT CP+C+ DA
Sbjct: 387 KANRT-CPICRADA 399
>sp|Q07G42|RNF12_XENTR E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis GN=rnf12
PE=2 SV=1
Length = 639
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 60 RRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWR 119
R L K + T +N +TC++C+ +Y+ G KLR LPC H++H C+D WL S
Sbjct: 561 RGLTKEQIDNLSTRNFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWL-SEN 619
Query: 120 TFCPVCKR 127
+ CP+C+R
Sbjct: 620 STCPICRR 627
>sp|Q641J8|RF12A_XENLA E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis GN=rnf12-a
PE=1 SV=1
Length = 622
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 60 RRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWR 119
R L K + T +N +TC++C+ +Y+ G KLR LPC H++H C+D WL S
Sbjct: 544 RGLTKEQIDNLSTRNFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHIHCIDRWL-SEN 602
Query: 120 TFCPVCKR 127
+ CP+C+R
Sbjct: 603 STCPICRR 610
>sp|Q7T037|RF12B_XENLA E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b
PE=2 SV=1
Length = 757
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 60 RRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWR 119
R L K + T +N +TC++C+ +Y+ G KLR LPC H++H C+D WL S
Sbjct: 679 RGLTKEQIDNLSTRNYGENDALKTCSVCITEYTEGNKLRKLPCSHEYHIHCIDRWL-SEN 737
Query: 120 TFCPVCKR 127
+ CP+C+R
Sbjct: 738 STCPICRR 745
>sp|Q86XS8|GOLI_HUMAN E3 ubiquitin-protein ligase RNF130 OS=Homo sapiens GN=RNF130 PE=1
SV=1
Length = 419
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Query: 8 SFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRREAPRASRGREFHGMSRRLVKAMP 67
+F + ++ISFI L+ +S+ +F+++ R R R R + + K
Sbjct: 189 NFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTNARDRNQR-RLGDAAKKAISKLTT 247
Query: 68 SLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKR 127
+ E + CA+C+E Y + +RILPC+H FH CVD WL+ T CP+CK
Sbjct: 248 RTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCT-CPMCKL 306
Query: 128 DARTSTGEPP 137
+ + G P
Sbjct: 307 NILKALGIVP 316
>sp|Q9H0F5|RNF38_HUMAN RING finger protein 38 OS=Homo sapiens GN=RNF38 PE=1 SV=4
Length = 515
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 57 GMSRRLVKAMPSLIFTAVVEDNCTSRT-CAICLEDYSVGEKLRILPCRHKFHAFCVDSWL 115
G+++ ++ +PS F ++ + +T C +C+ D+ + LR+LPC H+FHA CVD WL
Sbjct: 437 GLTKADIEQLPSYRFNP--NNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWL 494
Query: 116 TSWRTFCPVCKRDA 129
+ RT CP+C+ DA
Sbjct: 495 KANRT-CPICRADA 507
>sp|Q6Y290|GOLI_RAT E3 ubiquitin-protein ligase RNF130 OS=Rattus norvegicus GN=Rnf130
PE=1 SV=1
Length = 419
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Query: 8 SFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRREAPRASRGREFHGMSRRLVKAMP 67
+F + ++ISFI L+ +S+ +F+++ R R R R + + K
Sbjct: 189 NFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTNARDRNQR-RLGDAAKKAISKLTT 247
Query: 68 SLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKR 127
+ E + CA+C+E Y + +R+LPC+H FH CVD WL+ T CP+CK
Sbjct: 248 RTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLPCKHVFHKSCVDPWLSEHCT-CPMCKL 306
Query: 128 DARTSTGEPP 137
+ + G P
Sbjct: 307 NILKALGIVP 316
>sp|Q9DBU5|RNF6_MOUSE E3 ubiquitin-protein ligase RNF6 OS=Mus musculus GN=Rnf6 PE=1 SV=1
Length = 667
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 55 FHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSW 114
G+++ + + + + D+ + C++C+ DY G KLR LPC H+FH C+D W
Sbjct: 585 IRGLTKEQIDNLSTRSYEQDGVDSELGKVCSVCISDYVAGNKLRQLPCLHEFHIHCIDRW 644
Query: 115 LTSWRTFCPVCKR 127
L S CPVC+R
Sbjct: 645 L-SENCTCPVCRR 656
>sp|Q8VEM1|GOLI_MOUSE E3 ubiquitin-protein ligase RNF130 OS=Mus musculus GN=Rnf130 PE=2
SV=1
Length = 419
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Query: 8 SFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRREAPRASRGREFHGMSRRLVKAMP 67
+F + ++ISFI L+ +S+ +F+++ R R R R + + K
Sbjct: 189 NFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTNARDRNQR-RLGDAAKKAISKLTT 247
Query: 68 SLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKR 127
+ E + CA+C+E Y + +R+LPC+H FH CVD WL+ T CP+CK
Sbjct: 248 RTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLPCKHVFHKSCVDPWLSEHCT-CPMCKL 306
Query: 128 DARTSTGEPP 137
+ + G P
Sbjct: 307 NILKALGIVP 316
>sp|Q8BI21|RNF38_MOUSE RING finger protein 38 OS=Mus musculus GN=Rnf38 PE=2 SV=1
Length = 518
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 57 GMSRRLVKAMPSLIFTAVVEDNCTSRT-CAICLEDYSVGEKLRILPCRHKFHAFCVDSWL 115
G+++ ++ +PS F ++ + +T C +C+ D+ + LR+LPC H+FHA CVD WL
Sbjct: 440 GLTKADIEQLPSYRFNP--SNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWL 497
Query: 116 TSWRTFCPVCKRDA 129
RT CP+C+ DA
Sbjct: 498 KGNRT-CPICRADA 510
>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
Length = 624
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 60 RRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWR 119
R L K + +N +TC++C+ +Y+ G KLR LPC H++H C+D WL+
Sbjct: 546 RGLTKEQIDNLAMRSFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENS 605
Query: 120 TFCPVCKR 127
T CP+C+R
Sbjct: 606 T-CPICRR 612
>sp|Q9WTV7|RNF12_MOUSE E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2
Length = 600
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 60 RRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWR 119
R L K + +N +TC++C+ +Y+ G KLR LPC H++H C+D WL+
Sbjct: 522 RGLTKEQIDNLAMRSFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENS 581
Query: 120 TFCPVCKR 127
T CP+C+R
Sbjct: 582 T-CPICRR 588
>sp|Q9SN28|ATL7_ARATH RING-H2 finger protein ATL7 OS=Arabidopsis thaliana GN=ATL7 PE=2
SV=1
Length = 236
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 19/133 (14%)
Query: 57 GMSRRLVKAMPSLIFTA--VVEDNCTSRTCAICLEDYSVGEKLRILP-CRHKFHAFCVDS 113
G+S+ + + +P +I+ +V+D+ C++CL DY EKL+ +P C H FH C+D
Sbjct: 86 GLSKDIREMLPVVIYKESFIVKDS----QCSVCLGDYQAEEKLQQMPSCGHTFHMECIDL 141
Query: 114 WLTSWRTFCPVCKRDARTSTGEPPASESTPLLSSSPASSSILSSIRSSLASSSALHIPPS 173
WLTS T CP+C R S P+ L S S+ I+SSI +S ++ P S
Sbjct: 142 WLTS-HTTCPLC----RLSLIPKPS------LDLSHQSTEIVSSIENSNGGEASTQ-PDS 189
Query: 174 MSHSPSVSHIHSV 186
S + ++SH V
Sbjct: 190 QSATEAISHTDDV 202
>sp|Q7L0R7|RNF44_HUMAN RING finger protein 44 OS=Homo sapiens GN=RNF44 PE=2 SV=1
Length = 432
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 57 GMSRRLVKAMPSLIFTAVVEDNCTSRT-CAICLEDYSVGEKLRILPCRHKFHAFCVDSWL 115
G+++ ++ +PS F + + + +T C +C D+ + LR+LPC H+FH CVD WL
Sbjct: 354 GLTKADIEQLPSYRFNP--DSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWL 411
Query: 116 TSWRTFCPVCKRDA 129
+ RT CP+C+ DA
Sbjct: 412 KANRT-CPICRADA 424
>sp|E9QAU8|RN165_MOUSE RING finger protein 165 OS=Mus musculus GN=Rnf165 PE=2 SV=1
Length = 347
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 19/99 (19%)
Query: 36 FVRRHRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGE 95
F H+ ++ P+ S+G++ G E++ T C ICL GE
Sbjct: 265 FTFPHKYKKRRPQDSKGKKDEG------------------EESDTDEKCTICLSMLEDGE 306
Query: 96 KLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG 134
+R LPC H FH CVD WL + CP+C+ D T G
Sbjct: 307 DVRRLPCMHLFHQLCVDQWLAMSKK-CPICRVDIETQLG 344
>sp|Q14B02|RN133_MOUSE E3 ubiquitin-protein ligase RNF133 OS=Mus musculus GN=Rnf133 PE=1
SV=1
Length = 382
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 17/173 (9%)
Query: 21 FISLLAMSAVLATCFFVRRHRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVED--- 77
F+S + ++ AT + + IRR R + ++R L KA L + E
Sbjct: 191 FVSFMIVTT--ATLAYFTFYHIRRLWVARIENRRWKRLTRELKKAFGQLQVRVLKEGDEE 248
Query: 78 -NCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG-- 134
N + +C IC E Y E +RIL C+H FH C+D W+ + T CP+CK D + G
Sbjct: 249 VNPNADSCVICFEAYKPNEIVRILTCKHFFHKNCIDPWILAHGT-CPMCKCDILKALGIQ 307
Query: 135 --EPPASESTPLLSSSPASSSILSSIRSSLASSSALHIPPSMSHSPSVSHIHS 185
++S +L S+ ++ S + + +PP+ + S V+H+
Sbjct: 308 MDIEDGTDSLQVLMSNELPGTL-----SPVEEETNYELPPART-SSKVTHVQE 354
>sp|Q5SSZ7|ZNRF3_MOUSE E3 ubiquitin-protein ligase ZNRF3 OS=Mus musculus GN=Znrf3 PE=2
SV=1
Length = 913
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 84 CAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGEPPA 138
CAICLE Y GE+LR++PC H+FH CVD WL T CP C+ + G P A
Sbjct: 290 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHT-CPHCRHNIIEQKGNPGA 343
>sp|Q9ZT49|ATL45_ARATH RING-H2 finger protein ATL45 OS=Arabidopsis thaliana GN=ATL45 PE=2
SV=1
Length = 200
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 66/128 (51%), Gaps = 17/128 (13%)
Query: 15 SIMAISFISLLAMSAVLATCFFVRRHRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAV 74
S + + + + ++AV A C ++RR A G+ ++ ++A+P +TA
Sbjct: 31 SALLCALVCVAGLAAV-ARCAWLRRLTGVNPAAVGEAPPPNKGLKKKALQALPKSTYTAS 89
Query: 75 --------------VEDNCTSRTCAICLEDYSVGEKLRILP-CRHKFHAFCVDSWLTSWR 119
V D +S CAIC+ ++S GE++RILP C H FH C+D WLTS R
Sbjct: 90 ASTAAAADDLPCSSVGDGDSSTECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTS-R 148
Query: 120 TFCPVCKR 127
+ CP C+R
Sbjct: 149 SSCPSCRR 156
>sp|Q9ULT6|ZNRF3_HUMAN E3 ubiquitin-protein ligase ZNRF3 OS=Homo sapiens GN=ZNRF3 PE=1
SV=3
Length = 936
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 84 CAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGEPPA 138
CAICLE Y GE+LR++PC H+FH CVD WL T CP C+ + G P A
Sbjct: 293 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHT-CPHCRHNIIEQKGNPSA 346
>sp|Q9LS99|ATL77_ARATH RING-H2 finger protein ATL77 OS=Arabidopsis thaliana GN=ATL77 PE=2
SV=1
Length = 220
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 16/134 (11%)
Query: 6 IPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRREA------------PRASRGR 53
+P N + +++ + I L + L + +R IR + PR S
Sbjct: 42 VPDKNNLSGNVLMLLSILLCGIICSLGLHYIIRCAFIRSRSFMISDPISIPSTPRDSSVN 101
Query: 54 EFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILP-CRHKFHAFCVD 112
+ G+ ++ +K +P + ++ + C ICL D+ GE+LR+LP C H FH C+D
Sbjct: 102 K--GIKKKALKMLPVVNYSPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCID 159
Query: 113 SWLTSWRTFCPVCK 126
WLT T CP C+
Sbjct: 160 KWLTQHMT-CPKCR 172
>sp|Q6ZSG1|RN165_HUMAN RING finger protein 165 OS=Homo sapiens GN=RNF165 PE=1 SV=1
Length = 346
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 19/99 (19%)
Query: 36 FVRRHRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGE 95
F H+ ++ P+ +G++ G E++ T C ICL GE
Sbjct: 264 FTFPHKYKKRRPQDGKGKKDEG------------------EESDTDEKCTICLSMLEDGE 305
Query: 96 KLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG 134
+R LPC H FH CVD WL + CP+C+ D T G
Sbjct: 306 DVRRLPCMHLFHQLCVDQWLAMSKK-CPICRVDIETQLG 343
>sp|Q9SG96|ATL72_ARATH RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2
SV=1
Length = 181
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 57 GMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILP-CRHKFHAFCVDSWL 115
G+ ++ +K +P ++ + + D + C ICL D+ GEK+R+LP C H FH C+D+WL
Sbjct: 88 GLKKQALKQIPVGLYGSGIID-MKATECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWL 146
Query: 116 TSWRTFCPVCKR 127
S R+ CP C++
Sbjct: 147 LS-RSSCPTCRQ 157
>sp|Q9M2S6|SDIR1_ARATH E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1
PE=1 SV=1
Length = 273
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 83 TCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCK 126
TC++CLE +VGE +R LPC H+FHA C+D WL T CPVCK
Sbjct: 210 TCSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLRQQGT-CPVCK 252
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
SV=2
Length = 349
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 57 GMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILP-CRHKFHAFCVDSWL 115
G+ + + A+P ++ V CA+CL ++S +KLR+LP C H FH C+D+WL
Sbjct: 180 GLDQTAIDALPVFLYGNVTISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWL 239
Query: 116 TSWRTFCPVCKRDARTST 133
S T CP+C+R TS
Sbjct: 240 LSNST-CPLCRRSLSTSN 256
>sp|Q9LM69|ATL80_ARATH RING-H2 finger protein ATL80 OS=Arabidopsis thaliana GN=ATL80 PE=1
SV=1
Length = 197
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 76/139 (54%), Gaps = 19/139 (13%)
Query: 7 PSFENSAWS-------IMAISFISLLAMSAVLAT--CFFVRR----HRI----RREAPRA 49
P+ +NS + I+A +L+ + ++A C ++RR +R + ++P+
Sbjct: 17 PAIDNSTAALNSDLVVILAALLCALICVLGLIAVSRCVWLRRLAAGNRTVSGSQTQSPQP 76
Query: 50 SRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILP-CRHKFHA 108
G+ +++++++P L F+ ++ CAICL ++S G++LR+LP C H FH
Sbjct: 77 PVAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHV 136
Query: 109 FCVDSWLTSWRTFCPVCKR 127
C+D+WL S + CP C++
Sbjct: 137 ACIDTWLGS-HSSCPSCRQ 154
>sp|Q8TEB7|RN128_HUMAN E3 ubiquitin-protein ligase RNF128 OS=Homo sapiens GN=RNF128 PE=1
SV=1
Length = 428
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 2/145 (1%)
Query: 14 WSIMAISFISLLAMSAVLATCFFVRRHRIRREAPRASRGREFHGMSRRLVKAMP-SLIFT 72
+SI +S + +A + F R+R ++ + R+ +++ + + +
Sbjct: 206 YSIFFVSVSFFIITAATVGYFIFYSARRLRNARAQSRKQRQLKADAKKAIGRLQLRTLKQ 265
Query: 73 AVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTS 132
E +CA+C+E Y + +RIL C H FH CVD WL RT CP+CK D +
Sbjct: 266 GDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRT-CPMCKCDILKA 324
Query: 133 TGEPPASESTPLLSSSPASSSILSS 157
G E + P S+ I +S
Sbjct: 325 LGIEVDVEDGSVSLQVPVSNEISNS 349
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 66/136 (48%), Gaps = 21/136 (15%)
Query: 29 AVLATCFFVR-------RHRIRRE---APRASRGREFHGMSRR------LVKAMPSLIFT 72
AVL T FF+ RH R + R R R G SRR +V++ P ++
Sbjct: 51 AVLVTLFFLTGLLSVYIRHCARSNPDSSTRYFRNRANDGSSRRGGLDNAVVESFPVFAYS 110
Query: 73 AVVEDNCTSRT--CAICLEDYSVGEKLRILP-CRHKFHAFCVDSWLTSWRTFCPVCKRDA 129
+V E S+ CAICL + E +R+LP C H FH C+D+WL S T CPVC+ +
Sbjct: 111 SVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHAT-CPVCRSNL 169
Query: 130 RTSTGEP-PASESTPL 144
+ +P + PL
Sbjct: 170 TAKSNKPGDEDDGVPL 185
>sp|P87119|MU145_SCHPO RING finger protein mug145 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=mug145 PE=1 SV=1
Length = 309
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 84 CAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRD 128
C IC DY+ + LR+LPC H FH C+D+W+T+ + CP+C D
Sbjct: 205 CIICYADYAFDDILRVLPCEHVFHTQCIDTWMTTMKASCPLCNED 249
>sp|Q5RF74|RN128_PONAB E3 ubiquitin-protein ligase RNF128 OS=Pongo abelii GN=RNF128 PE=2
SV=1
Length = 428
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 2/145 (1%)
Query: 14 WSIMAISFISLLAMSAVLATCFFVRRHRIRREAPRASRGREFHGMSRRLVKAMP-SLIFT 72
+SI +S + +A + F R+R ++ + R+ +++ + + +
Sbjct: 206 YSIFFVSVSFFIITAATVGYFIFYSARRLRNARAQSRKQRQLKADAKKAIGRLQLRTLKQ 265
Query: 73 AVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTS 132
E +CA+C+E Y + +RIL C H FH CVD WL RT CP+CK D +
Sbjct: 266 GDREIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRT-CPMCKCDILKA 324
Query: 133 TGEPPASESTPLLSSSPASSSILSS 157
G E + P S+ I +S
Sbjct: 325 LGIEVDVEDGSVSLQVPVSNEISNS 349
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.127 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,111,136
Number of Sequences: 539616
Number of extensions: 3821272
Number of successful extensions: 21600
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 233
Number of HSP's successfully gapped in prelim test: 714
Number of HSP's that attempted gapping in prelim test: 17748
Number of HSP's gapped (non-prelim): 2880
length of query: 296
length of database: 191,569,459
effective HSP length: 117
effective length of query: 179
effective length of database: 128,434,387
effective search space: 22989755273
effective search space used: 22989755273
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)