BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>022516
MEWDNIREAAQQETQTQNQNQNQRGGENDNNNVVNGVMYVKVMTDEQLETLRKQIAVYAT
ICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILES
IFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNGG
GGGAGAGAGGADSEVETEVDSLLLHDEHKTTKPENLSSAHSTSQPQHLRNLPPTPRPRDD
DDPMCFHTPADISSSQLHFLGVFSNNPRDDHLTGKMGGMPGSYNLYDHAEDYSMAG

High Scoring Gene Products

Symbol, full name Information P value
WOX13
AT4G35550
protein from Arabidopsis thaliana 1.0e-52
WOX14
AT1G20700
protein from Arabidopsis thaliana 1.2e-40
WOX10
AT1G20710
protein from Arabidopsis thaliana 8.9e-38
WOX8
AT5G45980
protein from Arabidopsis thaliana 8.9e-14
HB-3
homeobox-3
protein from Arabidopsis thaliana 1.9e-13
WOX1
WUSCHEL related homeobox 1
protein from Arabidopsis thaliana 4.3e-13
WOX12
AT5G17810
protein from Arabidopsis thaliana 7.6e-13
WOX7
AT5G05770
protein from Arabidopsis thaliana 8.2e-12
WOX11
AT3G03660
protein from Arabidopsis thaliana 1.6e-11
WOX3
WUSCHEL-related homeobox 3
protein from Oryza sativa Japonica Group 1.7e-11
WOX5
WUSCHEL related homeobox 5
protein from Arabidopsis thaliana 2.8e-11
PRS
PRESSED FLOWER
protein from Arabidopsis thaliana 4.9e-11
WOX4
WUSCHEL related homeobox 4
protein from Arabidopsis thaliana 1.8e-10
PFS2
AT2G01500
protein from Arabidopsis thaliana 4.0e-10
WOX2
WUSCHEL related homeobox 2
protein from Arabidopsis thaliana 1.1e-09
AT5G46010 protein from Arabidopsis thaliana 1.6e-09
WUS
AT2G17950
protein from Arabidopsis thaliana 9.0e-08
WOX1B
WUSCHEL-related homeobox 1B
protein from Oryza sativa Japonica Group 2.1e-07
MIXL1
Uncharacterized protein
protein from Gallus gallus 0.00027
MIXL1
Uncharacterized protein
protein from Gallus gallus 0.00045
CG9876 protein from Drosophila melanogaster 0.00072

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  022516
        (296 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2127968 - symbol:WOX13 "AT4G35550" species:370...   546  1.0e-52   1
TAIR|locus:2030467 - symbol:WOX14 "AT1G20700" species:370...   432  1.2e-40   1
TAIR|locus:2030487 - symbol:WOX10 "AT1G20710" species:370...   405  8.9e-38   1
TAIR|locus:2161353 - symbol:WOX8 "AT5G45980" species:3702...   182  8.9e-14   1
TAIR|locus:2057614 - symbol:HB-3 "homeobox-3" species:370...   181  1.9e-13   1
TAIR|locus:2088550 - symbol:WOX1 "WUSCHEL related homeobo...   177  4.3e-13   1
TAIR|locus:2175941 - symbol:WOX12 "AT5G17810" species:370...   165  7.6e-13   2
TAIR|locus:2166434 - symbol:WOX7 "AT5G05770" species:3702...   160  8.2e-12   1
TAIR|locus:2096429 - symbol:WOX11 "AT3G03660" species:370...   169  1.6e-11   1
UNIPROTKB|Q33DK1 - symbol:WOX3 "WUSCHEL-related homeobox ...   157  1.7e-11   1
TAIR|locus:2074638 - symbol:WOX5 "WUSCHEL related homeobo...   155  2.8e-11   1
TAIR|locus:2065484 - symbol:PRS "PRESSED FLOWER" species:...   163  4.9e-11   1
TAIR|locus:2825767 - symbol:WOX4 "WUSCHEL related homeobo...   160  1.8e-10   1
TAIR|locus:2049547 - symbol:PFS2 "PRETTY FEW SEEDS 2" spe...   159  4.0e-10   1
TAIR|locus:2168504 - symbol:WOX2 "WUSCHEL related homeobo...   155  1.1e-09   1
TAIR|locus:2161388 - symbol:AT5G46010 species:3702 "Arabi...   140  1.6e-09   1
TAIR|locus:2060902 - symbol:WUS "AT2G17950" species:3702 ...   142  9.0e-08   1
UNIPROTKB|Q33DK0 - symbol:WOX1B "WUSCHEL-related homeobox...   139  2.1e-07   1
UNIPROTKB|F1NL46 - symbol:MIXL1 "Uncharacterized protein"...    94  0.00027   1
UNIPROTKB|F1NL45 - symbol:MIXL1 "Uncharacterized protein"...    92  0.00045   1
FB|FBgn0034821 - symbol:CG9876 species:7227 "Drosophila m...   109  0.00072   1


>TAIR|locus:2127968 [details] [associations]
            symbol:WOX13 "AT4G35550" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            EMBL:AL161587 EMBL:AL031135 HOGENOM:HOG000070737 EMBL:AY251404
            EMBL:AY048268 EMBL:BT000538 IPI:IPI00543316 PIR:T04660
            RefSeq:NP_195280.1 UniGene:At.2408 UniGene:At.50397
            ProteinModelPortal:O81788 SMR:O81788 PRIDE:O81788
            EnsemblPlants:AT4G35550.1 GeneID:829707 KEGG:ath:AT4G35550
            TAIR:At4g35550 eggNOG:NOG283530 InParanoid:O81788 OMA:VEMHKTL
            PhylomeDB:O81788 ProtClustDB:CLSN2916183 Genevestigator:O81788
            GermOnline:AT4G35550 Uniprot:O81788
        Length = 268

 Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
 Identities = 118/207 (57%), Positives = 143/207 (69%)

Query:    43 MTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKI 102
             MTDEQ ETLRKQIA+Y TICE+LVEMHK+L+A QDLA  GGR+G +Y DP+M+S G HK+
Sbjct:    38 MTDEQYETLRKQIAIYGTICERLVEMHKTLTAQQDLA--GGRMGGLYADPMMSSLG-HKM 94

Query:   103 SARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRAR 162
             +ARQRWTPTPVQLQILE IFDQGTGTPSKQKIK+IT ELSQHGQI+E NVYNWFQNRRAR
Sbjct:    95 TARQRWTPTPVQLQILERIFDQGTGTPSKQKIKDITEELSQHGQIAEQNVYNWFQNRRAR 154

Query:   163 SKRKQLVSSSANTLHNXXXXXXXXXXXXXDSEVETEVDSLLLHDEHKTTKPENLSSAHST 222
             SKRKQ    S+   +N             +SEVETEV++L   +E +  +PE+L      
Sbjct:   155 SKRKQHGGGSSGN-NNG------------ESEVETEVEAL---NEKRVVRPESLLGLPDG 198

Query:   223 SQPQHLRNLXXXXXXXXXXXXMCFHTP 249
             +   +                +CF +P
Sbjct:   199 NSNNNGLGTTTATTTAPRPEDLCFQSP 225

 Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
 Identities = 45/105 (42%), Positives = 60/105 (57%)

Query:   192 DSEVETEVDSLLLHDEHKTTKPENLSSAHSTSQPQHLRNLXXXXXXXXXXXXMCFHTPAD 251
             +SEVETEV++L   +E +  +PE+L      +   +                +CF +P +
Sbjct:   171 ESEVETEVEAL---NEKRVVRPESLLGLPDGNSNNNGLGTTTATTTAPRPEDLCFQSP-E 226

Query:   252 ISSSQLHFLGVFSNNPRDDHLTGKMGGMPGSYNLYDHAEDYSMAG 296
             ISS  LH L V SN PRD+HL GKMG +  SYNLYDH EDY M+G
Sbjct:   227 ISSD-LHLLDVLSN-PRDEHLVGKMG-LAESYNLYDHVEDYGMSG 268


>TAIR|locus:2030467 [details] [associations]
            symbol:WOX14 "AT1G20700" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0010072 "primary shoot apical meristem
            specification" evidence=IMP] [GO:0009691 "cytokinin biosynthetic
            process" evidence=RCA] InterPro:IPR001356 InterPro:IPR009057
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565
            EMBL:AC069251 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0010072 HOGENOM:HOG000070737
            ProtClustDB:CLSN2914683 eggNOG:NOG283530 EMBL:AJ441297
            IPI:IPI00533426 RefSeq:NP_173493.2 UniGene:At.41695
            ProteinModelPortal:Q9LM84 SMR:Q9LM84 EnsemblPlants:AT1G20700.1
            GeneID:838660 KEGG:ath:AT1G20700 TAIR:At1g20700 InParanoid:Q9LM84
            OMA:SHRISTR PhylomeDB:Q9LM84 Genevestigator:Q9LM84
            GermOnline:AT1G20700 Uniprot:Q9LM84
        Length = 211

 Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 81/132 (61%), Positives = 105/132 (79%)

Query:    43 MTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKI 102
             MT+EQ+E LRKQIAVYA IC+QLV +H SLS++  L++    +   Y DP+  S   H+I
Sbjct:    31 MTEEQMEILRKQIAVYAVICDQLVLLHNSLSSYHPLSSGVRPMVGGYFDPMGASSSSHRI 90

Query:   103 SARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRAR 162
             S R RWTPT  QLQILESI+D+G+GTP++++I+EI  ELS+HGQI+ETNVYNWFQNRRAR
Sbjct:    91 STRHRWTPTSTQLQILESIYDEGSGTPNRRRIREIATELSEHGQITETNVYNWFQNRRAR 150

Query:   163 SKRKQLVSSSAN 174
             SKRKQ  +++AN
Sbjct:   151 SKRKQPQTTTAN 162


>TAIR|locus:2030487 [details] [associations]
            symbol:WOX10 "AT1G20710" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565
            EMBL:AC069251 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            SUPFAM:SSF46689 IPI:IPI00538890 PIR:G86339 RefSeq:NP_173494.1
            UniGene:At.51695 ProteinModelPortal:Q9LM83 SMR:Q9LM83
            EnsemblPlants:AT1G20710.1 GeneID:838661 KEGG:ath:AT1G20710
            TAIR:At1g20710 eggNOG:NOG325202 HOGENOM:HOG000070737
            InParanoid:Q9LM83 OMA:NPRRIKE PhylomeDB:Q9LM83
            ProtClustDB:CLSN2914683 Genevestigator:Q9LM83 Uniprot:Q9LM83
        Length = 197

 Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
 Identities = 76/125 (60%), Positives = 98/125 (78%)

Query:    43 MTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKI 102
             MTDEQ+ETLRKQIA+YA +C+QLV +H SLS+   L++    +   Y DP++ S   H +
Sbjct:    15 MTDEQMETLRKQIAIYAVLCDQLVFLHNSLSSVPLLSSGMNPMRGEYFDPMVASSSAHGM 74

Query:   103 SARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRAR 162
             S R RWTPT  QLQILE+I+ +G+GTP+ ++IKEIT+ELS+HGQI E NVY+WFQNRRAR
Sbjct:    75 STRPRWTPTTTQLQILENIYKEGSGTPNPRRIKEITMELSEHGQIMEKNVYHWFQNRRAR 134

Query:   163 SKRKQ 167
             SKRKQ
Sbjct:   135 SKRKQ 139


>TAIR|locus:2161353 [details] [associations]
            symbol:WOX8 "AT5G45980" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IGI] [GO:0009793 "embryo development ending
            in seed dormancy" evidence=IGI;IMP] [GO:0048825 "cotyledon
            development" evidence=IGI;IMP] [GO:0030010 "establishment of cell
            polarity" evidence=IMP] [GO:0090451 "cotyledon boundary formation"
            evidence=IGI] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008284 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            EMBL:AB006698 GO:GO:0030010 GO:GO:0048825 GO:GO:0090451
            EMBL:AY251400 IPI:IPI00530694 RefSeq:NP_199410.2 UniGene:At.23155
            ProteinModelPortal:Q6X7J5 SMR:Q6X7J5 PRIDE:Q6X7J5
            EnsemblPlants:AT5G45980.1 GeneID:834638 KEGG:ath:AT5G45980
            TAIR:At5g45980 eggNOG:NOG319740 HOGENOM:HOG000154860 OMA:EIQRIRI
            PhylomeDB:Q6X7J5 ProtClustDB:CLSN2680017 Genevestigator:Q6X7J5
            GermOnline:AT5G45980 Uniprot:Q6X7J5
        Length = 325

 Score = 182 (69.1 bits), Expect = 8.9e-14, P = 8.9e-14
 Identities = 34/78 (43%), Positives = 53/78 (67%)

Query:    90 CDPLMTSGGGHKI-SARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQIS 148
             C+ L +S    +I   + RW P P Q++ILESIF+ GT  P +++I+ I + L ++GQI 
Sbjct:    38 CN-LSSSFSSDRIPDPKPRWNPKPEQIRILESIFNSGTINPPREEIQRIRIRLQEYGQIG 96

Query:   149 ETNVYNWFQNRRARSKRK 166
             + NV+ WFQNR++R+K K
Sbjct:    97 DANVFYWFQNRKSRAKHK 114


>TAIR|locus:2057614 [details] [associations]
            symbol:HB-3 "homeobox-3" species:3702 "Arabidopsis
            thaliana" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IMP] [GO:0010075 "regulation of meristem
            growth" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0009793 "embryo development ending in seed dormancy"
            evidence=RCA;IMP] [GO:0009735 "response to cytokinin stimulus"
            evidence=IGI] [GO:0009737 "response to abscisic acid stimulus"
            evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
            [GO:0010093 "specification of floral organ identity" evidence=RCA]
            [GO:0010162 "seed dormancy process" evidence=RCA] [GO:0048440
            "carpel development" evidence=RCA] [GO:0048507 "meristem
            development" evidence=RCA] InterPro:IPR001356 InterPro:IPR009057
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0009735 GO:GO:0008284 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 GO:GO:0009793 Gene3D:1.10.10.60 SUPFAM:SSF46689
            EMBL:U78721 GO:GO:0010075 HOGENOM:HOG000154860
            ProtClustDB:CLSN2680017 EMBL:AY251401 EMBL:AK118501 EMBL:BT005296
            IPI:IPI00546241 PIR:G84750 RefSeq:NP_180944.2 UniGene:At.14699
            ProteinModelPortal:Q6X7J4 SMR:Q6X7J4 IntAct:Q6X7J4
            EnsemblPlants:AT2G33880.1 GeneID:817958 KEGG:ath:AT2G33880
            TAIR:At2g33880 eggNOG:NOG331259 InParanoid:Q6X7J4 OMA:QHGASYY
            PhylomeDB:Q6X7J4 Genevestigator:Q6X7J4 GermOnline:AT2G33880
            Uniprot:Q6X7J4
        Length = 378

 Score = 181 (68.8 bits), Expect = 1.9e-13, P = 1.9e-13
 Identities = 37/119 (31%), Positives = 60/119 (50%)

Query:   105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
             + RW P P Q++ILE+IF+ G   P +++I+ I  +L ++GQ+ + NV+ WFQNR++RSK
Sbjct:    53 KPRWNPKPEQIRILEAIFNSGMVNPPREEIRRIRAQLQEYGQVGDANVFYWFQNRKSRSK 112

Query:   165 RKQLVSSSANTLHNXXXXXXXXXXXXXDSEVETEVDSLLLHDEHKTTKPENLSSAHSTS 223
              K         LHN               +      S       K+TKP    + ++T+
Sbjct:   113 HK------LRLLHNHSKHSLPQTQPQPQPQPSASSSSSSSSSSSKSTKPRKSKNKNNTN 165


>TAIR|locus:2088550 [details] [associations]
            symbol:WOX1 "WUSCHEL related homeobox 1" species:3702
            "Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0048513 "organ development"
            evidence=IGI] [GO:0005829 "cytosol" evidence=IDA]
            InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005829 GO:GO:0005634
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048513
            EMBL:AB019230 EMBL:AY251394 IPI:IPI00529632 RefSeq:NP_188428.3
            UniGene:At.49388 ProteinModelPortal:Q6X7K0 SMR:Q6X7K0 PaxDb:Q6X7K0
            PRIDE:Q6X7K0 EnsemblPlants:AT3G18010.1 GeneID:821325
            KEGG:ath:AT3G18010 TAIR:At3g18010 eggNOG:NOG308045
            HOGENOM:HOG000090885 InParanoid:Q6X7K0 OMA:DEGELQH PhylomeDB:Q6X7K0
            ProtClustDB:CLSN2920267 Genevestigator:Q6X7K0 Uniprot:Q6X7K0
        Length = 350

 Score = 177 (67.4 bits), Expect = 4.3e-13, P = 4.3e-13
 Identities = 30/66 (45%), Positives = 46/66 (69%)

Query:   102 ISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
             +    RW PTP QL++LE ++ QGT TPS   I++IT +L ++G+I   NV+ WFQN +A
Sbjct:    71 VMVSSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKA 130

Query:   162 RSKRKQ 167
             R ++K+
Sbjct:   131 RERQKR 136


>TAIR|locus:2175941 [details] [associations]
            symbol:WOX12 "AT5G17810" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB006706
            EMBL:AY251403 EMBL:AK117910 EMBL:BT006232 IPI:IPI00524309
            RefSeq:NP_001190327.1 RefSeq:NP_197283.2 UniGene:At.31506
            ProteinModelPortal:Q8GY25 SMR:Q8GY25 IntAct:Q8GY25
            EnsemblPlants:AT5G17810.1 EnsemblPlants:AT5G17810.2 GeneID:831649
            KEGG:ath:AT5G17810 TAIR:At5g17810 eggNOG:NOG256790
            HOGENOM:HOG000064623 InParanoid:Q8GY25 OMA:NNGMENL PhylomeDB:Q8GY25
            ProtClustDB:CLSN2680059 Genevestigator:Q8GY25 Uniprot:Q8GY25
        Length = 268

 Score = 165 (63.1 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
 Identities = 32/70 (45%), Positives = 47/70 (67%)

Query:   105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
             R RW+P P Q+ ILESIF+ GT  P K +   I   L + G + + NV+ WFQNRR+RS+
Sbjct:    19 RARWSPKPEQILILESIFNSGTVNPPKDETVRIRKMLEKFGAVGDANVFYWFQNRRSRSR 78

Query:   165 RK--QLVSSS 172
             R+  QL++++
Sbjct:    79 RRHRQLLAAT 88

 Score = 42 (19.8 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
 Identities = 13/43 (30%), Positives = 23/43 (53%)

Query:   253 SSSQL--HFLGVFSNNPRDDHLTGKMGGMPGSYNLYDHAEDYS 293
             SSSQ+   FLG+ S++   ++      GM   + +Y H  D++
Sbjct:   138 SSSQIPSFFLGLSSSSGGCEN----NNGMENLFKMYGHESDHN 176


>TAIR|locus:2166434 [details] [associations]
            symbol:WOX7 "AT5G05770" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB005237
            eggNOG:NOG241769 EMBL:AB493739 IPI:IPI00518458 RefSeq:NP_196196.1
            UniGene:At.54734 ProteinModelPortal:Q9FFK0 SMR:Q9FFK0
            EnsemblPlants:AT5G05770.1 GeneID:830462 KEGG:ath:AT5G05770
            TAIR:At5g05770 InParanoid:Q9FFK0 PhylomeDB:Q9FFK0
            Genevestigator:Q9FFK0 Uniprot:Q9FFK0
        Length = 122

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 30/71 (42%), Positives = 47/71 (66%)

Query:    96 SGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNW 155
             +GGG   +   RW PT  Q+++L  +F  G  TPS  +I++I++ELS +G+I   NV+ W
Sbjct:    18 NGGGGTGAKCGRWNPTVEQVKLLTDLFKAGLRTPSTDQIQKISMELSFYGKIESKNVFYW 77

Query:   156 FQNRRARSKRK 166
             FQN +AR ++K
Sbjct:    78 FQNHKARERQK 88


>TAIR|locus:2096429 [details] [associations]
            symbol:WOX11 "AT3G03660" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0016114 "terpenoid biosynthetic process" evidence=RCA]
            InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 EMBL:CP002686 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC009327
            HOGENOM:HOG000064623 ProtClustDB:CLSN2680059 IPI:IPI00891503
            RefSeq:NP_001118563.1 UniGene:At.40942 ProteinModelPortal:B3H5D3
            SMR:B3H5D3 EnsemblPlants:AT3G03660.2 GeneID:821196
            KEGG:ath:AT3G03660 OMA:ILESIFH ArrayExpress:B3H5D3
            Genevestigator:B3H5D3 Uniprot:B3H5D3
        Length = 297

 Score = 169 (64.5 bits), Expect = 1.6e-11, P = 1.6e-11
 Identities = 33/76 (43%), Positives = 44/76 (57%)

Query:    92 PLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETN 151
             P   SG       R RW+P P Q+ ILESIF  G   P K++   I   L + G + + N
Sbjct:    18 PSSASGSTSAEPVRSRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDAN 77

Query:   152 VYNWFQNRRARSKRKQ 167
             V+ WFQNRR+RS+R+Q
Sbjct:    78 VFYWFQNRRSRSRRRQ 93


>UNIPROTKB|Q33DK1 [details] [associations]
            symbol:WOX3 "WUSCHEL-related homeobox 3" species:39947
            "Oryza sativa Japonica Group" [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 EMBL:DP000010 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:CM000148
            EMBL:DP000011 eggNOG:NOG302146 EMBL:AB218893 EMBL:AM234748
            ProteinModelPortal:Q33DK1 IntAct:Q33DK1
            EnsemblPlants:LOC_Os11g01130.1 EnsemblPlants:LOC_Os12g01120.1
            Gramene:Q33DK1 OMA:SNQLEEW Uniprot:Q33DK1
        Length = 203

 Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 27/60 (45%), Positives = 41/60 (68%)

Query:   107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
             RW PTP QL ILE ++  G  TP+  +I++IT  L+ +G+I   NV+ WFQN +AR +++
Sbjct:     8 RWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHKARERQR 67


>TAIR|locus:2074638 [details] [associations]
            symbol:WOX5 "WUSCHEL related homeobox 5" species:3702
            "Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0009733 "response to auxin stimulus"
            evidence=IEP] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            SUPFAM:SSF46689 EMBL:AC073395 EMBL:AY251398 EMBL:AY150812
            IPI:IPI00524533 RefSeq:NP_187735.2 UniGene:At.39787
            ProteinModelPortal:Q8H1D2 SMR:Q8H1D2 STRING:Q8H1D2
            EnsemblPlants:AT3G11260.1 GeneID:820297 KEGG:ath:AT3G11260
            TAIR:At3g11260 eggNOG:NOG241769 HOGENOM:HOG000238479
            InParanoid:Q8H1D2 OMA:TGTKCGR PhylomeDB:Q8H1D2
            ProtClustDB:CLSN2690857 Genevestigator:Q8H1D2 Uniprot:Q8H1D2
        Length = 182

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 38/129 (29%), Positives = 67/129 (51%)

Query:   107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
             RW PT  QL+IL  +F  G  TP+  +I++I+ ELS +G+I   NV+ WFQN +AR ++K
Sbjct:    24 RWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTELSFYGKIESKNVFYWFQNHKARERQK 83

Query:   167 QL-VSSSANTLHNXXXXXXXXXXXXXDSEVETEV-DSLLLHD----EHKTTKPENLSSAH 220
             +  +S   +  H+             D + E +V ++L L      E   +K + + +  
Sbjct:    84 RRKISIDFDHHHHQPSTRDVFEISEEDCQEEEKVIETLQLFPVNSFEDSNSKVDKMRARG 143

Query:   221 STSQPQHLR 229
             +    +++R
Sbjct:   144 NNQYREYIR 152


>TAIR|locus:2065484 [details] [associations]
            symbol:PRS "PRESSED FLOWER" species:3702 "Arabidopsis
            thaliana" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
            evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0008283 "cell proliferation"
            evidence=IMP] [GO:0009908 "flower development" evidence=IMP]
            [GO:0009943 "adaxial/abaxial axis specification" evidence=IMP]
            [GO:0009947 "centrolateral axis specification" evidence=IMP]
            [GO:0010865 "stipule development" evidence=IMP] [GO:0048513 "organ
            development" evidence=IGI] InterPro:IPR001356 InterPro:IPR009057
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0030154 EMBL:CP002685 GO:GO:0008283
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0009908 EMBL:AC007171 EMBL:AB058920
            EMBL:AY251397 IPI:IPI00536433 PIR:A84687 RefSeq:NP_180429.1
            UniGene:At.28458 ProteinModelPortal:Q9SIB4 SMR:Q9SIB4 STRING:Q9SIB4
            PRIDE:Q9SIB4 EnsemblPlants:AT2G28610.1 GeneID:817410
            KEGG:ath:AT2G28610 TAIR:At2g28610 eggNOG:NOG302146
            InParanoid:Q9SIB4 OMA:PVASTRW ProtClustDB:CLSN2913193
            Genevestigator:Q9SIB4 GO:GO:0009943 GO:GO:0009947 GO:GO:0010865
            Uniprot:Q9SIB4
        Length = 244

 Score = 163 (62.4 bits), Expect = 4.9e-11, P = 4.9e-11
 Identities = 33/74 (44%), Positives = 46/74 (62%)

Query:   104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARS 163
             A  RW PTP QL ILE ++  G  TP+  +I++IT  L+ +G+I   NV+ WFQN +AR 
Sbjct:     5 ASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKARD 64

Query:   164 KRKQLVSSSANTLH 177
             ++K L    A  LH
Sbjct:    65 RQK-LRKKLAKQLH 77


>TAIR|locus:2825767 [details] [associations]
            symbol:WOX4 "WUSCHEL related homeobox 4" species:3702
            "Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0007165 "signal
            transduction" evidence=IEP] [GO:0010067 "procambium histogenesis"
            evidence=IMP] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0007165 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            EMBL:AC083835 GO:GO:0010067 EMBL:AY251396 EMBL:BT010692
            EMBL:BT010974 IPI:IPI00536109 PIR:F96511 RefSeq:NP_175145.2
            UniGene:At.38691 ProteinModelPortal:Q6X7J9 SMR:Q6X7J9 IntAct:Q6X7J9
            EnsemblPlants:AT1G46480.1 GeneID:841113 KEGG:ath:AT1G46480
            GeneFarm:3104 TAIR:At1g46480 eggNOG:NOG268206 HOGENOM:HOG000272700
            InParanoid:Q6X7J9 OMA:ENEYKRT PhylomeDB:Q6X7J9
            ProtClustDB:CLSN2680403 Genevestigator:Q6X7J9 Uniprot:Q6X7J9
        Length = 251

 Score = 160 (61.4 bits), Expect = 1.8e-10, P = 1.8e-10
 Identities = 28/61 (45%), Positives = 43/61 (70%)

Query:   107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
             RW PT  Q+ ILE ++  G  TP+ Q+I+ IT++L ++G+I   NV+ WFQN +AR ++K
Sbjct:    90 RWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKARERQK 149

Query:   167 Q 167
             Q
Sbjct:   150 Q 150


>TAIR|locus:2049547 [details] [associations]
            symbol:PFS2 "PRETTY FEW SEEDS 2" species:3702
            "Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS;NAS] [GO:0005634
            "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0009409 "response
            to cold" evidence=NAS] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0048482 "ovule morphogenesis" evidence=IMP]
            [GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0016049 "cell
            growth" evidence=IMP] [GO:0048314 "embryo sac morphogenesis"
            evidence=IMP] [GO:0048353 "primary endosperm nucleus" evidence=IDA]
            [GO:0048366 "leaf development" evidence=IMP] [GO:0048437 "floral
            organ development" evidence=IMP] [GO:0048446 "petal morphogenesis"
            evidence=RCA;IMP] [GO:0051301 "cell division" evidence=IMP]
            [GO:0048445 "carpel morphogenesis" evidence=RCA] InterPro:IPR001356
            InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0030154 EMBL:CP002685 GO:GO:0051301
            GO:GO:0016049 GO:GO:0043565 GO:GO:0048477 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009965
            EMBL:AC005560 GO:GO:0048446 GO:GO:0048482 EMBL:AY251399
            EMBL:AY885222 EMBL:AY085832 IPI:IPI00544402 PIR:E84425
            RefSeq:NP_565263.1 UniGene:At.42485 ProteinModelPortal:Q9ZVF5
            SMR:Q9ZVF5 STRING:Q9ZVF5 PRIDE:Q9ZVF5 EnsemblPlants:AT2G01500.1
            GeneID:814678 KEGG:ath:AT2G01500 TAIR:At2g01500 eggNOG:NOG239725
            OMA:CDINGND PhylomeDB:Q9ZVF5 ProtClustDB:CLSN2916958
            Genevestigator:Q9ZVF5 GO:GO:0048353 GO:GO:0048314 Uniprot:Q9ZVF5
        Length = 271

 Score = 159 (61.0 bits), Expect = 4.0e-10, P = 4.0e-10
 Identities = 33/91 (36%), Positives = 52/91 (57%)

Query:    86 GNIYCDPLMTSGGGHKISARQ---------RWTPTPVQLQILESIFDQGTGTPSKQKIKE 136
             GN +   +  S G H I  R+         RW PTP Q+  LE ++  GT TP+ ++I++
Sbjct:    31 GNDHHQLITASSGEHDIDERKNNIPAAATLRWNPTPEQITTLEELYRSGTRTPTTEQIQQ 90

Query:   137 ITVELSQHGQISETNVYNWFQNRRARSKRKQ 167
             I  +L ++G+I   NV+ WFQN +AR + K+
Sbjct:    91 IASKLRKYGRIEGKNVFYWFQNHKARERLKR 121


>TAIR|locus:2168504 [details] [associations]
            symbol:WOX2 "WUSCHEL related homeobox 2" species:3702
            "Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0009880 "embryonic pattern specification"
            evidence=IMP] [GO:0009942 "longitudinal axis specification"
            evidence=IMP] [GO:0010654 "apical cell fate commitment"
            evidence=IMP] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IGI] [GO:0048825 "cotyledon development"
            evidence=IGI;IMP] [GO:0080167 "response to karrikin" evidence=IEP]
            [GO:0090451 "cotyledon boundary formation" evidence=IGI]
            InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0008284 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 GO:GO:0080167 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0009942 GO:GO:0048825 EMBL:AB016890 EMBL:AY251392
            EMBL:AY251393 IPI:IPI00526689 RefSeq:NP_200742.2 UniGene:At.49429
            ProteinModelPortal:Q6X7K1 SMR:Q6X7K1 EnsemblPlants:AT5G59340.1
            GeneID:836053 KEGG:ath:AT5G59340 TAIR:At5g59340 eggNOG:NOG294844
            HOGENOM:HOG000090362 InParanoid:Q6X7K1 OMA:RAYGHIE PhylomeDB:Q6X7K1
            ProtClustDB:CLSN2681679 Genevestigator:Q6X7K1 GermOnline:AT5G59340
            GO:GO:0010654 GO:GO:0090451 Uniprot:Q6X7K1
        Length = 260

 Score = 155 (59.6 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 27/65 (41%), Positives = 43/65 (66%)

Query:   103 SARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRAR 162
             ++  RW PT  Q+ +LE+++ +G  TPS  +I++IT  L  +G I   NV+ WFQN +AR
Sbjct:    10 ASSSRWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKAR 69

Query:   163 SKRKQ 167
              ++KQ
Sbjct:    70 QRQKQ 74


>TAIR|locus:2161388 [details] [associations]
            symbol:AT5G46010 species:3702 "Arabidopsis thaliana"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA;TAS] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0005773 "vacuole" evidence=IDA]
            InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 SMART:SM00389
            GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005773
            GO:GO:0043565 GO:GO:0003700 SUPFAM:SSF46689 EMBL:AB006698
            IPI:IPI00544220 RefSeq:NP_199413.1 UniGene:At.55398
            ProteinModelPortal:Q9FNM1 SMR:Q9FNM1 EnsemblPlants:AT5G46010.1
            GeneID:834641 KEGG:ath:AT5G46010 TAIR:At5g46010 InParanoid:Q9FNM1
            PhylomeDB:Q9FNM1 Genevestigator:Q9FNM1 Uniprot:Q9FNM1
        Length = 122

 Score = 140 (54.3 bits), Expect = 1.6e-09, P = 1.6e-09
 Identities = 28/67 (41%), Positives = 42/67 (62%)

Query:   105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQ-ISETNVYNWFQNRRARS 163
             +  W P   Q QILE +F  GT  PS   IK+IT++L  +G+ + + +VY WF NR+  S
Sbjct:    52 KPEWKPNQHQAQILEELFIGGTVNPSLTSIKQITIKLQSYGEEVDDADVYKWFHNRKY-S 110

Query:   164 KRKQLVS 170
             ++ +LVS
Sbjct:   111 RKPKLVS 117


>TAIR|locus:2060902 [details] [associations]
            symbol:WUS "AT2G17950" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA;TAS] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0048653 "anther development" evidence=IMP] [GO:0080166 "stomium
            development" evidence=IMP] [GO:0010492 "maintenance of shoot apical
            meristem identity" evidence=IGI] [GO:0009827 "plant-type cell wall
            modification" evidence=RCA] [GO:0009860 "pollen tube growth"
            evidence=RCA] [GO:0010093 "specification of floral organ identity"
            evidence=RCA] [GO:0048440 "carpel development" evidence=RCA]
            [GO:0019827 "stem cell maintenance" evidence=IMP]
            InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CP002685
            GO:GO:0043565 GO:GO:0048477 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010492 EMBL:AC006201
            EMBL:AJ012310 EMBL:AY086385 IPI:IPI00522840 PIR:D84558 PIR:T00829
            RefSeq:NP_565429.1 UniGene:At.51 ProteinModelPortal:Q9SB92
            SMR:Q9SB92 IntAct:Q9SB92 STRING:Q9SB92 EnsemblPlants:AT2G17950.1
            GeneID:816305 KEGG:ath:AT2G17950 GeneFarm:4830 TAIR:At2g17950
            eggNOG:NOG286377 InParanoid:Q9SB92 OMA:GEDHING PhylomeDB:Q9SB92
            ProtClustDB:CLSN2688215 Genevestigator:Q9SB92 GO:GO:0080166
            Uniprot:Q9SB92
        Length = 292

 Score = 142 (55.0 bits), Expect = 9.0e-08, P = 9.0e-08
 Identities = 28/73 (38%), Positives = 45/73 (61%)

Query:    96 SGGGHKISARQRWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYN 154
             SGG        RWTPT  Q++IL+ ++ +    +P+  +I++IT  L Q G+I   NV+ 
Sbjct:    27 SGGYTCRQTSTRWTPTTEQIKILKELYYNNAIRSPTADQIQKITARLRQFGKIEGKNVFY 86

Query:   155 WFQNRRARSKRKQ 167
             WFQN +AR ++K+
Sbjct:    87 WFQNHKARERQKK 99


>UNIPROTKB|Q33DK0 [details] [associations]
            symbol:WOX1B "WUSCHEL-related homeobox 1B" species:39947
            "Oryza sativa Japonica Group" [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:CM000141 EMBL:AB218894
            ProteinModelPortal:Q33DK0 IntAct:Q33DK0 Gramene:Q33DK0
            Uniprot:Q33DK0
        Length = 289

 Score = 139 (54.0 bits), Expect = 2.1e-07, P = 2.1e-07
 Identities = 25/66 (37%), Positives = 44/66 (66%)

Query:   107 RWTPTPVQLQILESIFDQ-GTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
             RWTPT  Q++IL  ++   G  +P+ ++I+ I   L Q+G+I   NV+ WFQN +AR ++
Sbjct:    35 RWTPTTEQIKILRELYYSCGIRSPNSEQIQRIAAMLRQYGRIEGKNVFYWFQNHKARERQ 94

Query:   166 KQLVSS 171
             K+ +++
Sbjct:    95 KKRLTT 100


>UNIPROTKB|F1NL46 [details] [associations]
            symbol:MIXL1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GeneTree:ENSGT00700000104128 IPI:IPI00572899
            EMBL:AADN02012178 EMBL:AADN02012179 Ensembl:ENSGALT00000038806
            OMA:AFPAGRW ArrayExpress:F1NL46 Uniprot:F1NL46
        Length = 122

 Score = 94 (38.1 bits), Expect = 0.00027, P = 0.00027
 Identities = 26/70 (37%), Positives = 39/70 (55%)

Query:    98 GGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQ 157
             G      R+R + T  QL+ LE +F Q T  P    ++E    L+   QI E+ +  WFQ
Sbjct:    53 GAPSAQRRKRTSFTAAQLETLELVF-QDTMYPDIY-LRE---RLADATQIPESRIQVWFQ 107

Query:   158 NRRARSKRKQ 167
             NRRA+S+R++
Sbjct:   108 NRRAKSRRQR 117


>UNIPROTKB|F1NL45 [details] [associations]
            symbol:MIXL1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GeneTree:ENSGT00700000104128 EMBL:AADN02012178
            EMBL:AADN02012179 IPI:IPI00590510 Ensembl:ENSGALT00000038807
            ArrayExpress:F1NL45 Uniprot:F1NL45
        Length = 116

 Score = 92 (37.4 bits), Expect = 0.00045, P = 0.00045
 Identities = 25/63 (39%), Positives = 38/63 (60%)

Query:   105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
             R+R + T  QL+ LE +F Q T  P    ++E    L+   QI E+ +  WFQNRRA+S+
Sbjct:     5 RKRTSFTAAQLETLELVF-QDTMYPDIY-LRE---RLADATQIPESRIQVWFQNRRAKSR 59

Query:   165 RKQ 167
             R++
Sbjct:    60 RQR 62


>FB|FBgn0034821 [details] [associations]
            symbol:CG9876 species:7227 "Drosophila melanogaster"
            [GO:0005634 "nucleus" evidence=ISS] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=ISS]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:P06601 eggNOG:NOG309174
            EMBL:BT009975 ProteinModelPortal:Q7YU61 SMR:Q7YU61 PRIDE:Q7YU61
            FlyBase:FBgn0034821 InParanoid:Q7YU61 OrthoDB:EOG4NCJWH
            ArrayExpress:Q7YU61 Bgee:Q7YU61 Uniprot:Q7YU61
        Length = 275

 Score = 109 (43.4 bits), Expect = 0.00072, P = 0.00072
 Identities = 35/100 (35%), Positives = 50/100 (50%)

Query:    79 AAAGGRLGNIYCDPLMTSGGGH--KISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKE 136
             A  GG      C   + +GGGH  +   R R T +  QL  LE +F++ T  P    ++E
Sbjct:    91 AGCGGADRPAPCSGNLPAGGGHHSRKPRRNRTTFSSAQLTALEKVFER-THYPDAF-VRE 148

Query:   137 ITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTL 176
                EL+    +SE  V  WFQNRRA+ +R +  S  + TL
Sbjct:   149 ---ELATKVHLSEARVQVWFQNRRAKFRRNER-SVGSRTL 184


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.128   0.373    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      296       239   0.00092  113 3  11 23  0.47    33
                                                     32  0.44    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  21
  No. of states in DFA:  612 (65 KB)
  Total size of DFA:  199 KB (2112 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.88u 0.11s 20.99t   Elapsed:  00:00:01
  Total cpu time:  20.88u 0.11s 20.99t   Elapsed:  00:00:01
  Start:  Fri May 10 03:41:25 2013   End:  Fri May 10 03:41:26 2013

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