BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022517
(296 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6DJ13|ZN830_XENTR Zinc finger protein 830 OS=Xenopus tropicalis GN=znf830 PE=2 SV=1
Length = 357
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 122/278 (43%), Gaps = 47/278 (16%)
Query: 2 DAARKKAI----FRAKLNAQKK----EKRINSPLVRYNEFDQPVCRVCDVVLKSDSQWDA 53
DA +KK + R + A+++ +KRI SPL +YN +C VC++ +KS+ W A
Sbjct: 3 DAGKKKLVQQEELRRLMKAKQRRSCSKKRIESPLAKYNSLGHLLCVVCNIQIKSELLWPA 62
Query: 54 HQASRKHHEAIKNIKAGATGNNSRMVSDAAKPEAGRESSRSESRSASQNAEIESSAKLGK 113
H ++H E + +K G+ + + S + K + R S +Q ++ +
Sbjct: 63 HILGKQHKEKVAELK----GSKANISSPSNKVQLHHIMKRKGSEPENQESKRIKGTEDQP 118
Query: 114 ARTSSVLPSNFFDSQEAKRPK-----TDSVKLV--------------DPDSNKTSGVSAK 154
+ LP FF+++E K S+KL+ + N+ S K
Sbjct: 119 TALKTKLPEGFFETEETSSAKHAAEKAPSLKLLAGDYEDDDEVEGEEYENVNEASTSLQK 178
Query: 155 TQAMKSVVLENEMDELPNGNAVDAKKGQPLKEHP---------EKSKQSVDSEAKQIKGA 205
+ + D LP + ++K PL H EK + D+ A+ A
Sbjct: 179 PAEIPLPPPTSSADRLP-ADFFESK--MPLVSHSGSVLKADIQEKIVERKDNTAE----A 231
Query: 206 LPEGFFDNKEADLLARGIKPVKPDVKDEYKEYEKLIQE 243
LPEGFFD+ EAD R + K + E++E++K I++
Sbjct: 232 LPEGFFDDPEADAKVRKVDAPKDQMDKEWEEFQKEIRQ 269
>sp|Q8R1N0|ZN830_MOUSE Zinc finger protein 830 OS=Mus musculus GN=Znf830 PE=1 SV=1
Length = 363
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 113/260 (43%), Gaps = 34/260 (13%)
Query: 9 IFRAKLNAQKKEKRINSPLVRYNEFDQPVCRVCDVVLKSDSQWDAHQASRKHHEAIKNIK 68
+ R K KRI SP +YN Q C +C+ +KS+ W H ++H E + +K
Sbjct: 24 LMREKQRLSTNRKRIESPFAKYNRLGQLSCALCNTPVKSELLWQTHVLGKQHRERVAELK 83
Query: 69 A--GAT-GNNSRMVSDAAKPEAGR-ESSRSESRSASQNAEIE-----SSAKLGKARTSSV 119
GAT G ++ V A K A ES ++ AS +++ SSA L AR +
Sbjct: 84 GAKGATQGPSTGTVPQATKRRATDVESQDAKKAKASAGPQVQPSTSASSANLDAARAAPS 143
Query: 120 LPS-----NFFD-----SQEAKRPKTDSVKLVDPDSNKTSGVSAKTQAMKSVVLENEMDE 169
P ++ D + + DS K + PD+ A + S VL N+
Sbjct: 144 KPGLGLLPDYDDEEEEEEEGGGEERRDSSKHL-PDAQGKEHSLASPRETTSNVLPND--- 199
Query: 170 LP-NGNAVDAKKGQPLKEHP---EKSK--QSVDSEAKQIKGALPEGFFDNKEADLLARGI 223
P N N A PL H EK++ + V + ALPEGFFD+ E D R +
Sbjct: 200 -PFNTNPPKA----PLVPHSGSIEKAEIHEKVVERRENTAEALPEGFFDDPEVDAKVRKV 254
Query: 224 KPVKPDVKDEYKEYEKLIQE 243
K + E+ E++K +++
Sbjct: 255 DAPKDQMDKEWDEFQKAMRQ 274
>sp|Q63ZM9|ZN830_XENLA Zinc finger protein 830 OS=Xenopus laevis GN=znf830 PE=2 SV=1
Length = 356
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 113/258 (43%), Gaps = 26/258 (10%)
Query: 7 KAIFRAKLNAQKKEKRINSPLVRYNEFDQPVCRVCDVVLKSDSQWDAHQASRKHHEAIKN 66
+ + +AK +KRI SPL +YN C VC+ ++KS+ W AH ++H E +
Sbjct: 16 RKLMKAKQRESSSKKRIESPLAKYNSLGHLSCVVCNSLIKSELLWPAHILGKQHKEKVAE 75
Query: 67 IKAGATGNNSRMVSDAAKPEAGRESSRSESRSASQNAEIESSAKLGKARTSSVLPSNFFD 126
+K G + S + E R + R S Q ++ ++ + +++ LP FF+
Sbjct: 76 LK----GTKATTSSPSNTIEYPRITKRKGSEPEKQESKRTKGSEDHPSASTTKLPEEFFE 131
Query: 127 SQEAKRP-KTDSVKLVDPDSNKTSGVSAKT--------QAMKSVVLENEMDELPNGNAVD 177
++ S+KL+ D A+ +A S++ E+ P ++ D
Sbjct: 132 KEKTSSAGNAPSLKLLAGDYEDVDDDDAEEGEEYENAKEASSSLLKPAEIPLPPPTSSAD 191
Query: 178 A------KKGQPLKEHPEKSKQSVDSEAKQIK------GALPEGFFDNKEADLLARGIKP 225
+ PL H S D + K ++ ALPEGFFD+ E D R +
Sbjct: 192 NLPADFFENKMPLVSH-SGSVLKADIQEKIVERKENTAEALPEGFFDDPEVDAKVRKVDA 250
Query: 226 VKPDVKDEYKEYEKLIQE 243
K + E++E++K I++
Sbjct: 251 PKDQMDKEWEEFQKEIRQ 268
>sp|Q3MHS2|ZN830_RAT Zinc finger protein 830 OS=Rattus norvegicus GN=Znf830 PE=2 SV=1
Length = 370
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 97/257 (37%), Gaps = 45/257 (17%)
Query: 21 KRINSPLVRYNEFDQPVCRVCDVVLKSDSQWDAHQASRKHHEAIKNIKAGATGNNSRMVS 80
KRI SP +YN Q C +C+ +KS+ W H ++H E + +K GA G +
Sbjct: 36 KRIESPFAKYNRLGQLSCALCNTPVKSELLWQTHVLGKQHRERVAELK-GAKGATQGPSA 94
Query: 81 DAAKPEAGRESSRSESRSASQNAEIESSAKLGKARTSSVLPS------NFFDS-QEAKRP 133
A R+++ ES+ AK KA V PS NF S +EA R
Sbjct: 95 GTAPQPTKRKTTDVESQ----------DAKKAKASVDQVQPSTSASSANFEKSGKEATRV 144
Query: 134 KTDSVKL-VDPDSNKTSGVSAKTQAMKSVVLENEMDELPNG------------NAVDAKK 180
+ L + PD + + + + LP+ +
Sbjct: 145 ASSKTGLGLLPDYEEEEEEEEEEELGGGEERRDSSKHLPDAQGREHSLASPRETTSNVLP 204
Query: 181 GQPLKEHPEKS--------------KQSVDSEAKQIKGALPEGFFDNKEADLLARGIKPV 226
P +P K+ + V + ALPEGFFD+ E D R +
Sbjct: 205 NDPFNTNPPKAPLVPHSGSIEKAEIHEKVVERRENTAEALPEGFFDDPEVDAKVRKVDAP 264
Query: 227 KPDVKDEYKEYEKLIQE 243
K + E+ E++K +++
Sbjct: 265 KDQMDKEWDEFQKAMRQ 281
>sp|Q6P0I6|ZN830_DANRE Zinc finger protein 830 OS=Danio rerio GN=znf830 PE=2 SV=1
Length = 326
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 104/262 (39%), Gaps = 81/262 (30%)
Query: 19 KEKRINSPLVRYNEFDQPVCRVCDVVLKSDSQWDAHQASRKHHEAIKNIKAGATGNNSRM 78
++KR+ SP RY+ Q +C +CD +K+ W H ++H + ++ +K+ ++
Sbjct: 31 RQKRVESPFARYSGAGQLMCALCDAPVKNALLWQTHVLGKQHKDKLQELKSRTAPAHTPA 90
Query: 79 V--SDAAKPEAGRESSRSESRSASQNAEIESSAKL------------------------- 111
+ A P A SS + R+A AKL
Sbjct: 91 PAHTPAHTPAAASSSSSTLKRAAEPPPAPGKRAKLQTGAGAGLGLLAGHYDDDDDDEGGA 150
Query: 112 GKARTS----SVLPSNFFDSQEAKRPKTDSVKLVDPDSNKTSGVSAKTQAMKSVVLENEM 167
G+ +T+ S LP++FFDS A P P S+ SG +K + +S
Sbjct: 151 GERKTAPPTDSALPADFFDSGPAPAP---------PISH--SGSVSKAEQQES------- 192
Query: 168 DELPNGNAVDAKKGQPLKEHPEKSKQSVDSEAKQIKGALPEGFFDNKEADLLARGIKPVK 227
+E PE +S LPEGFFD+ D R + K
Sbjct: 193 -----------------QEPPENRPES-----------LPEGFFDDPVRDAQVRQVDTPK 224
Query: 228 PDVKDEYKEYEKLIQEDLKQVD 249
++ E++E++K +++QV+
Sbjct: 225 DQLEREWEEFQK----EMRQVN 242
>sp|Q96NB3|ZN830_HUMAN Zinc finger protein 830 OS=Homo sapiens GN=ZNF830 PE=1 SV=2
Length = 372
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 21 KRINSPLVRYNEFDQPVCRVCDVVLKSDSQWDAHQASRKHHEAIKNIKAG 70
KRI SP +YN Q C +C+ +KS+ W H ++H E + +K
Sbjct: 36 KRIESPFAKYNRLGQLSCALCNTPVKSELLWQTHVLGKQHREKVAELKGA 85
>sp|Q8BXJ8|Z385B_MOUSE Zinc finger protein 385B OS=Mus musculus GN=Znf385b PE=2 SV=1
Length = 482
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 18/98 (18%)
Query: 38 CRVCDVVLKSDSQWDAHQASRKHHEAIKNIKAGATGNNSRMVS--DAAK--------PEA 87
C VC + SDSQ +AH KH + +K ++ AT N +MV D+AK P
Sbjct: 171 CNVCQLRFNSDSQAEAHYKGSKHAKKVKALE--ATKNKPKMVPSKDSAKANPSCSIRPGT 228
Query: 88 GRESSRSESR------SASQNAEIESSAKLGKARTSSV 119
G S +SE + S+SQ + E + L K+ T+ +
Sbjct: 229 GDSSDKSEDKGKIKATSSSQPSGSEGGSFLLKSGTTPL 266
>sp|Q569K4|Z385B_HUMAN Zinc finger protein 385B OS=Homo sapiens GN=ZNF385B PE=2 SV=1
Length = 471
Score = 35.4 bits (80), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 12/70 (17%)
Query: 38 CRVCDVVLKSDSQWDAHQASRKHHEAIKNIKAGATGNNSRMVS--DAAK--------PEA 87
C VC + SDSQ +AH KH + +K + AT N +MV D+AK P
Sbjct: 159 CNVCQLRFNSDSQAEAHYKGSKHAKKVKALD--ATKNKPKMVPSKDSAKANPSCSITPIT 216
Query: 88 GRESSRSESR 97
G S +SE +
Sbjct: 217 GNNSDKSEDK 226
>sp|Q8AVN9|ZN346_XENLA Zinc finger protein 346 OS=Xenopus laevis GN=znf346 PE=1 SV=1
Length = 524
Score = 35.0 bits (79), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 23 INSPLVRYNE--FDQPVCRVCDVVLKSDSQWDAHQASRKHHEAIKNIKA 69
+NS L+R N F C+VC VL S+SQ AH SRKH ++ A
Sbjct: 20 VNS-LIRENSHIFSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMA 67
>sp|B0JZ85|ZN346_XENTR Zinc finger protein 346 OS=Xenopus tropicalis GN=znf346 PE=2 SV=2
Length = 354
Score = 34.7 bits (78), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 27 LVRYNE--FDQPVCRVCDVVLKSDSQWDAHQASRKHHEAIK 65
L+R N F C+VC VL S+SQ AH SRKH ++
Sbjct: 23 LIRENSHIFSDTQCKVCSAVLISESQKLAHYQSRKHANKVR 63
>sp|Q96SQ5|ZN587_HUMAN Zinc finger protein 587 OS=Homo sapiens GN=ZNF587 PE=2 SV=1
Length = 575
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 70/175 (40%), Gaps = 15/175 (8%)
Query: 38 CRVCDVVLKSDSQWDAHQASRKHHEAIKNIKAGATGNN---SRMVSDAAKPEAGRESSRS 94
C +C ++L+ + HQ + HH+ N ++GA G N + + K G + R
Sbjct: 94 CEMCGLILEDVFHFADHQET--HHKQKLN-RSGACGKNLDDTAYLHQHQKQHIGEKFYRK 150
Query: 95 ESRSAS----QNAEIESSAKLGKARTSSVLPSNFFDSQEAKRPKTDSVKLVDP-----DS 145
R AS + + + + VLPS+ +EA KTDS + P +
Sbjct: 151 SVREASFVKKRKLRVSQEPFVFREFGKDVLPSSGLCQEEAAVEKTDSETMHGPPFQEGKT 210
Query: 146 NKTSGVSAKTQAMKSVVLENEMDELPNGNAVDAKKGQPLKEHPEKSKQSVDSEAK 200
N + G K + K V+ ++ +G V + G+ + S D AK
Sbjct: 211 NYSCGKRTKAFSTKHSVIPHQKLFTRDGCYVCSDCGKSFSRYVSFSNHQRDHTAK 265
>sp|Q6ZWR6|SYNE1_MOUSE Nesprin-1 OS=Mus musculus GN=Syne1 PE=1 SV=2
Length = 8799
Score = 32.0 bits (71), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 194 SVDSEAKQIKGALPEGFFDNKEADLLARGIKPVKPDVKDEYKEYEKLIQE------DLKQ 247
S++S+ +Q+ AL + F ++ + R P PD+ YK Y KL+ E +++
Sbjct: 8333 SLESQMRQLDKALDDSRFQIQQTANILRSKTPTGPDLDTSYKGYMKLLGECSGSIDSVRR 8392
Query: 248 VDDRFEEEE 256
++ + EEE
Sbjct: 8393 LEHKLAEEE 8401
>sp|Q9H6B1|Z385D_HUMAN Zinc finger protein 385D OS=Homo sapiens GN=ZNF385D PE=2 SV=1
Length = 395
Score = 31.6 bits (70), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 38 CRVCDVVLKSDSQWDAHQASRKHHEAIKNIKAGATGNNSRMVSDAAK 84
C +C + SDSQ AH KH + +K ++A S D+AK
Sbjct: 82 CNICQLRFNSDSQAAAHYKGTKHAKKLKALEAMKNKQKSVTAKDSAK 128
>sp|Q80UN9|MOD5_MOUSE tRNA dimethylallyltransferase, mitochondrial OS=Mus musculus
GN=Trit1 PE=2 SV=2
Length = 467
Score = 31.6 bits (70), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 37 VCRVCDVVLKSDSQWDAHQASRKHHEAIKNIKAGATGNNSRMVSDAAKPEAGRESSRSES 96
+C +CD ++ D +W AH S+ H +K + S S + P+ E ES
Sbjct: 396 MCDLCDRIIIGDREWAAHLKSKSHLHQLKKRRRLDLDAVSATGSQSNSPDCDPERIEGES 455
Query: 97 RSASQNAEIESSA 109
S N E+++S
Sbjct: 456 -SGQHNQELKASV 467
>sp|Q8NUU7|FNBA_STAAW Fibronectin-binding protein A OS=Staphylococcus aureus (strain MW2)
GN=fnbA PE=3 SV=1
Length = 1015
Score = 31.2 bits (69), Expect = 9.6, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 23/117 (19%)
Query: 78 MVSDAAKPEAGRESSRSESRS------------ASQNAEIESSAKLGKARTSSVLPSNFF 125
+V + AKP+ +E+++S+ S A+QN E+ ++ + RT+S
Sbjct: 117 VVKEEAKPQV-KETTQSQDNSGDQRQVDLTPKKATQNQVAETQVEVAQPRTAS------- 168
Query: 126 DSQEAKRPKTDSVKLVDPDSNKTSGVSAKTQAMKSVVLENEMDELPNGNAVDAKKGQ 182
E+K T S +V+ V T V +E+ E P GN V+ GQ
Sbjct: 169 ---ESKPRVTRSADVVEAKEASDEKVETGTDVTSKVTVESGSIEAPQGNKVEPHAGQ 222
>sp|Q6G6H3|FNBA_STAAS Fibronectin-binding protein A OS=Staphylococcus aureus (strain
MSSA476) GN=fnbA PE=3 SV=1
Length = 1015
Score = 31.2 bits (69), Expect = 9.6, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 23/117 (19%)
Query: 78 MVSDAAKPEAGRESSRSESRS------------ASQNAEIESSAKLGKARTSSVLPSNFF 125
+V + AKP+ +E+++S+ S A+QN E+ ++ + RT+S
Sbjct: 117 VVKEEAKPQV-KETTQSQDNSGDQRQVDLTPKKATQNQVAETQVEVAQPRTAS------- 168
Query: 126 DSQEAKRPKTDSVKLVDPDSNKTSGVSAKTQAMKSVVLENEMDELPNGNAVDAKKGQ 182
E+K T S +V+ V T V +E+ E P GN V+ GQ
Sbjct: 169 ---ESKPRVTRSADVVEAKEASDEKVETGTDVTSKVTVESGSIEAPQGNKVEPHAGQ 222
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.126 0.345
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,903,304
Number of Sequences: 539616
Number of extensions: 4174136
Number of successful extensions: 14957
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 291
Number of HSP's that attempted gapping in prelim test: 14466
Number of HSP's gapped (non-prelim): 692
length of query: 296
length of database: 191,569,459
effective HSP length: 117
effective length of query: 179
effective length of database: 128,434,387
effective search space: 22989755273
effective search space used: 22989755273
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)