Query 022524
Match_columns 295
No_of_seqs 93 out of 106
Neff 5.7
Searched_HMMs 13730
Date Mon Mar 25 06:53:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022524.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/022524hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1seta1 a.2.7.1 (A:1-110) Sery 66.4 20 0.0014 25.7 9.4 75 210-286 11-90 (110)
2 d1ugoa_ a.7.7.1 (A:) BAG-famil 57.4 8 0.00059 28.2 5.2 56 219-279 5-60 (99)
3 d1ivsa1 a.2.7.3 (A:797-862) Va 49.0 31 0.0022 22.5 6.9 23 199-221 44-66 (66)
4 d1ivsa1 a.2.7.3 (A:797-862) Va 42.9 15 0.0011 24.1 4.3 58 197-254 7-64 (66)
5 d1fxkc_ a.2.5.1 (C:) Prefoldin 38.0 56 0.0041 23.6 7.6 90 190-290 18-132 (133)
6 d2gxba1 a.4.5.19 (A:140-198) Z 29.0 6.3 0.00046 26.3 0.3 28 25-61 19-46 (59)
7 d1gs9a_ a.24.1.1 (A:) Apolipop 27.0 1.1E+02 0.008 22.3 14.2 17 240-256 126-142 (144)
8 d1urua_ a.238.1.1 (A:) Amphiph 26.5 1.2E+02 0.0087 22.6 19.2 49 131-179 12-60 (217)
9 d1g73a_ a.7.4.1 (A:) Smac/diab 25.1 1.4E+02 0.01 23.0 8.6 51 236-286 46-105 (157)
10 d1szia_ a.24.23.1 (A:) Mannose 24.6 1.7E+02 0.012 23.7 14.7 148 128-283 49-207 (226)
11 d1gnwa1 a.45.1.1 (A:86-211) Cl 22.9 59 0.0043 23.2 5.1 35 250-284 36-70 (126)
12 d1seta1 a.2.7.1 (A:1-110) Sery 20.2 1.3E+02 0.0097 20.8 8.6 28 192-219 69-96 (110)
No 1
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=66.36 E-value=20 Score=25.72 Aligned_cols=75 Identities=12% Similarity=0.148 Sum_probs=48.2
Q ss_pred HHHHHHHhhhcCCCCCCcHHHHHHHHHHHHHHHHhcHhHHHhhhh----hcCC-CCCHHHHHHHHHHHHHHHHHHHHHHH
Q 022524 210 YNNYKALLNRVGYTPEISHGVLVEMAEHRKELEKKTKPILDTLRS----YQDL-PPDKALAALAIEDKKRQYAAAEKYLE 284 (295)
Q Consensus 210 i~~le~~l~~~g~~~s~sh~~l~~~~e~~~eL~~~~k~L~~kL~s----y~dL-Ppd~~lAr~kiEear~EL~~Le~~l~ 284 (295)
...+...+..+|++.+ ...+.++.+.+.++..++..|..+-.. +.-. +.+.+....+....+.++..++.++.
T Consensus 11 ~e~v~~~l~~R~~~~~--ld~i~~ld~~rr~l~~~~e~l~~~rN~~sk~i~k~~~~~~~~l~~~~k~lk~~i~~le~~~~ 88 (110)
T d1seta1 11 PEVFHRAIREKGVALD--LEALLALDREVQELKKRLQEVQTERNQVAKRVPKAPPEEKEALIARGKALGEEAKRLEEALR 88 (110)
T ss_dssp HHHHHHHHHHTTCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCccC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445667788899754 578999988888777777776665422 2122 23344455666667777777777665
Q ss_pred HH
Q 022524 285 DV 286 (295)
Q Consensus 285 ~~ 286 (295)
..
T Consensus 89 ~~ 90 (110)
T d1seta1 89 EK 90 (110)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 2
>d1ugoa_ a.7.7.1 (A:) BAG-family molecular chaperone regulator-5, BAG-5 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=57.43 E-value=8 Score=28.21 Aligned_cols=56 Identities=18% Similarity=0.252 Sum_probs=38.9
Q ss_pred hcCCCCCCcHHHHHHHHHHHHHHHHhcHhHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHH
Q 022524 219 RVGYTPEISHGVLVEMAEHRKELEKKTKPILDTLRSYQDLPPDKALAALAIEDKKRQYAAA 279 (295)
Q Consensus 219 ~~g~~~s~sh~~l~~~~e~~~eL~~~~k~L~~kL~sy~dLPpd~~lAr~kiEear~EL~~L 279 (295)
..||+....|..|.+. .+...++..|..++..|-+.++|....+.. |.+-+.|-.|
T Consensus 5 ~~~~~~~~~~~sl~~I----~~i~~ev~~L~~~V~~f~~~~~dke~~~L~-E~L~~~LlkL 60 (99)
T d1ugoa_ 5 SSGMDMGNQHPSISRL----QEIQREVKAIEPQVVGFSGLSDDKNYKRLE-RILTKQLFEI 60 (99)
T ss_dssp CCCCCCSCCCTTHHHH----HHHHHHHHHSHHHHHTCCCCTTSSHHHHHH-HHHHHHHHHH
T ss_pred cCCCCCCCCCHHHHHH----HHHHHHHHHHHHHHHHHhCccchHHHHHHH-HHHHHHHHHh
Confidence 3577777788777655 466677778999999999999997655433 3344444333
No 3
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=48.99 E-value=31 Score=22.49 Aligned_cols=23 Identities=17% Similarity=0.382 Sum_probs=15.7
Q ss_pred HHhhHHHHHHHHHHHHHHhhhcC
Q 022524 199 MASKERQYLQQYNNYKALLNRVG 221 (295)
Q Consensus 199 L~aK~~Ey~~ri~~le~~l~~~g 221 (295)
-+.|..+|...+..++..+...|
T Consensus 44 ~k~kl~~~~~~~~~l~~~l~~Lg 66 (66)
T d1ivsa1 44 EEARLKENLEQAERIREALSQIG 66 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhC
Confidence 35667777777777777766554
No 4
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=42.85 E-value=15 Score=24.14 Aligned_cols=58 Identities=14% Similarity=0.149 Sum_probs=35.9
Q ss_pred HHHHhhHHHHHHHHHHHHHHhhhcCCCCCCcHHHHHHHHHHHHHHHHhcHhHHHhhhh
Q 022524 197 AVMASKERQYLQQYNNYKALLNRVGYTPEISHGVLVEMAEHRKELEKKTKPILDTLRS 254 (295)
Q Consensus 197 k~L~aK~~Ey~~ri~~le~~l~~~g~~~s~sh~~l~~~~e~~~eL~~~~k~L~~kL~s 254 (295)
.-|..++..+...+..++..|+.-+|........+.+..+.+.++..++..++..|..
T Consensus 7 ~RL~K~l~kl~~~i~~~~~kL~N~~F~~kAP~~Vv~~~k~kl~~~~~~~~~l~~~l~~ 64 (66)
T d1ivsa1 7 RRQEKRLKELLALAERSQRKLASPGFREKAPKEVVEAEEARLKENLEQAERIREALSQ 64 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSTTHHHHSCTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCChHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3455566666666777777777666643344445555556677777777766666653
No 5
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=38.05 E-value=56 Score=23.60 Aligned_cols=90 Identities=9% Similarity=0.130 Sum_probs=51.6
Q ss_pred HHHHHhHHHHHhhHHHHHHHHHHHHHHhhhc-CCC------C------CCcH--HHH----------HHHHHHHHHHHHh
Q 022524 190 ENWKTNLAVMASKERQYLQQYNNYKALLNRV-GYT------P------EISH--GVL----------VEMAEHRKELEKK 244 (295)
Q Consensus 190 ~~~~r~~k~L~aK~~Ey~~ri~~le~~l~~~-g~~------~------s~sh--~~l----------~~~~e~~~eL~~~ 244 (295)
...+..+..+.....||..-+.+++. +... |.+ + .+.+ ..+ ....+...-+.++
T Consensus 18 ~~l~~~i~~l~~~~~e~~~~~~~L~~-l~~~~~~e~lvplg~~~~v~~~i~~~~~vlV~lG~g~~vE~~~~eA~~~l~~r 96 (133)
T d1fxkc_ 18 ELIQQQMEAVRATISELEILEKTLSD-IQGKDGSETLVPVGAGSFIKAELKDTSEVIMSVGAGVAIKKNFEDAMESIKSQ 96 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HTTCTTCEEEEEEETTEEEEEECCSTTEEEEEEETTEEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hhcCCCCeEEEEcCCceEEEEEecCCCceEEEecCCeeeeecHHHHHHHHHHH
Confidence 45566677788888888766666664 3321 110 0 0000 000 0112455556677
Q ss_pred cHhHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 022524 245 TKPILDTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLHSA 290 (295)
Q Consensus 245 ~k~L~~kL~sy~dLPpd~~lAr~kiEear~EL~~Le~~l~~~~~~~ 290 (295)
++.|++.++.+ ...+...+.++..+..++++.++.+
T Consensus 97 i~~l~~~~~~l----------~~~~~~~~~~i~~l~~~~~~l~~a~ 132 (133)
T d1fxkc_ 97 KNELESTLQKM----------GENLRAITDIMMKLSPQAEELLAAV 132 (133)
T ss_dssp HHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 77777776654 4566677788888888887776643
No 6
>d2gxba1 a.4.5.19 (A:140-198) Z-alpha domain of dsRNA-specific adenosine deaminase, ADAR1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.01 E-value=6.3 Score=26.32 Aligned_cols=28 Identities=25% Similarity=0.291 Sum_probs=23.3
Q ss_pred HHHHHhhcccCCCCCCCCccChHHHHHHHHHHHhhHh
Q 022524 25 KAWLASQFEASAKEVPAFEYTSRSVAHLYNLATLSQA 61 (295)
Q Consensus 25 ~sWL~~~f~~~~~pvP~fErN~~Tl~~L~~La~~nea 61 (295)
.-||+++|+ ||-=|+| ++||.|...+..
T Consensus 19 A~~LA~kl~-----vpKk~iN----r~LYsL~~kgkl 46 (59)
T d2gxba1 19 AHDLSGKLG-----TPKKEIN----RVLYSLAKKGKL 46 (59)
T ss_dssp HHHHHHHHT-----CCHHHHH----HHHHHHHHTTSE
T ss_pred HHHHHHHhC-----CcHHHHH----HHHHHHHHccch
Confidence 359999999 8988998 899999876643
No 7
>d1gs9a_ a.24.1.1 (A:) Apolipoprotein E {Human (Homo sapiens), E4 [TaxId: 9606]}
Probab=26.96 E-value=1.1e+02 Score=22.34 Aligned_cols=17 Identities=24% Similarity=0.386 Sum_probs=9.5
Q ss_pred HHHHhcHhHHHhhhhhc
Q 022524 240 ELEKKTKPILDTLRSYQ 256 (295)
Q Consensus 240 eL~~~~k~L~~kL~sy~ 256 (295)
.+...+..|+.+|.+|.
T Consensus 126 ~l~~~~eel~~kL~py~ 142 (144)
T d1gs9a_ 126 RLLRDADDLQKRLAVYQ 142 (144)
T ss_dssp HHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHhhCcc
Confidence 44555555666666653
No 8
>d1urua_ a.238.1.1 (A:) Amphiphysin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=26.50 E-value=1.2e+02 Score=22.60 Aligned_cols=49 Identities=16% Similarity=0.084 Sum_probs=34.2
Q ss_pred HHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 022524 131 VAMGDISLRKTAVEEKRAKVQKESKILLDYTRKAIARLTYLKRTLGQLE 179 (295)
Q Consensus 131 ~ai~~Lt~e~~~~e~~~~rl~~~i~~L~~~l~k~l~~~~~L~~~L~~L~ 179 (295)
..+-++......++....++.+.++.+...++.-......+.+.+.++-
T Consensus 12 ~~fe~~~~~~~~~e~~l~~l~k~~~~~~~~~~~~~~~~~~~~~~l~~l~ 60 (217)
T d1urua_ 12 EIFDDHLNNFNRQQASANRLQKEFNNYIRCVRAAQAASKTLMDSVCEIY 60 (217)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4455566666777777777878888887777777777676666666553
No 9
>d1g73a_ a.7.4.1 (A:) Smac/diablo {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.12 E-value=1.4e+02 Score=22.96 Aligned_cols=51 Identities=10% Similarity=-0.001 Sum_probs=34.8
Q ss_pred HHHHHHHHhcHhHHHhhhhhcCCCCC---------HHHHHHHHHHHHHHHHHHHHHHHHH
Q 022524 236 EHRKELEKKTKPILDTLRSYQDLPPD---------KALAALAIEDKKRQYAAAEKYLEDV 286 (295)
Q Consensus 236 e~~~eL~~~~k~L~~kL~sy~dLPpd---------~~lAr~kiEear~EL~~Le~~l~~~ 286 (295)
.+|..-...+..|-++-.+|.|=+.. +-.+|+++...|+|+.++|+..-..
T Consensus 46 t~Y~kav~tl~sL~k~y~a~lgk~~~~eed~vWqvII~~R~ev~~~~~e~~~lEs~w~sa 105 (157)
T d1g73a_ 46 TEYTKAVYTLTSLYRQYTSLLGKMNSEEEDEVWQVIIGARAEMTSKHQEYLKLETTWMTA 105 (157)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCchhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555555555566666553333 5679999999999999999877443
No 10
>d1szia_ a.24.23.1 (A:) Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=24.56 E-value=1.7e+02 Score=23.73 Aligned_cols=148 Identities=14% Similarity=0.156 Sum_probs=69.7
Q ss_pred HHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhccccch--------hhHH-HHHHhHH
Q 022524 128 SFLVAMGDISLRKTAVEEKRAKVQKESKILLDYTRKAIAR-LTYLKRTLGQLEDDVAPCE--------AQME-NWKTNLA 197 (295)
Q Consensus 128 sl~~ai~~Lt~e~~~~e~~~~rl~~~i~~L~~~l~k~l~~-~~~L~~~L~~L~~d~~~~~--------~~~~-~~~r~~k 197 (295)
.|-+++..+..-.+...+...+++.-++.+ .+.++.+.- +..-...|.++=.+..... .+.+ --.+.+.
T Consensus 49 Ay~hal~klr~ak~~~qEaLsqL~~tl~Li-e~ak~~v~~~l~~~qekL~q~W~~W~~~~~~~~~~~~~~~e~vEsrtL~ 127 (226)
T d1szia_ 49 AYEHSLGKLQNARQKAQETLQQLTSVLGLM-ESVKQGVDQRLGEGQEKLHQMWLSWNQKTPQDAEKDPAKPEQVEARALS 127 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHC--------------------------------CCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCcCccccchHHHHHHHHHHhhhccCCccccccccHHHHHHHHHH
Confidence 366777777777777776666665555544 333444321 0010101111100111000 0001 1123334
Q ss_pred HHHhhHHHHHHHHHHHHHHhhhcCCCCCCcHHHHHHHHHHHHHHHHhcHhHHHhhhhhcCCCCC-HHHHHHHHHHHHHHH
Q 022524 198 VMASKERQYLQQYNNYKALLNRVGYTPEISHGVLVEMAEHRKELEKKTKPILDTLRSYQDLPPD-KALAALAIEDKKRQY 276 (295)
Q Consensus 198 ~L~aK~~Ey~~ri~~le~~l~~~g~~~s~sh~~l~~~~e~~~eL~~~~k~L~~kL~sy~dLPpd-~~lAr~kiEear~EL 276 (295)
+...=..+++.-...+..+ -.|.+ +.|.+...++...-..+-..=....+|+|||+. +...|-.|..++.-|
T Consensus 128 ~ar~LtqQLqstc~~L~ss--iqGLP-----~~iQdq~~~~r~~~~~L~~~f~~a~Sf~dLs~~~L~~sr~ql~~~~~~l 200 (226)
T d1szia_ 128 MFRDITQQLQSMCVALGAS--IQGLP-----SHVREQAQQARSQVNDLQATFSGIHSFQDLSAGVLAQTRERIARAREAL 200 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHT--TTTSC-----HHHHHHHHHHHHHHHHHHHHGGGCCSGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH--hccCC-----HHHHHHHHHHHHHHHHHHHHHHhcccHhhcCHHHHHHHHHHHHHHHHHH
Confidence 4444455555555444432 34663 344444444444444444555667899999999 566666676776666
Q ss_pred HHHHHHH
Q 022524 277 AAAEKYL 283 (295)
Q Consensus 277 ~~Le~~l 283 (295)
+.+-.++
T Consensus 201 d~lldyl 207 (226)
T d1szia_ 201 DNTVEYV 207 (226)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655443
No 11
>d1gnwa1 a.45.1.1 (A:86-211) Class phi GST {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=22.88 E-value=59 Score=23.24 Aligned_cols=35 Identities=20% Similarity=0.189 Sum_probs=28.9
Q ss_pred HhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 022524 250 DTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLE 284 (295)
Q Consensus 250 ~kL~sy~dLPpd~~lAr~kiEear~EL~~Le~~l~ 284 (295)
.-+.++.|.|||....+..++.+++-|..++..|.
T Consensus 36 ~~~~p~~G~~~d~~~v~~~~~~l~~~l~~le~~L~ 70 (126)
T d1gnwa1 36 QIFKSIYGLTTDEAVVAEEEAKLAKVLDVYEARLK 70 (126)
T ss_dssp HTHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhcccccCCCCCHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34567889999999888888888888888888774
No 12
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=20.17 E-value=1.3e+02 Score=20.83 Aligned_cols=28 Identities=7% Similarity=0.071 Sum_probs=16.7
Q ss_pred HHHhHHHHHhhHHHHHHHHHHHHHHhhh
Q 022524 192 WKTNLAVMASKERQYLQQYNNYKALLNR 219 (295)
Q Consensus 192 ~~r~~k~L~aK~~Ey~~ri~~le~~l~~ 219 (295)
....++.++.++.++......++..+..
T Consensus 69 l~~~~k~lk~~i~~le~~~~~~~~~l~~ 96 (110)
T d1seta1 69 LIARGKALGEEAKRLEEALREKEARLEA 96 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445666666666666666666655543
Done!