Query 022526
Match_columns 295
No_of_seqs 137 out of 1441
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 06:55:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022526.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022526hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zz1_A Histone deacetylase-lik 100.0 2.1E-77 7.2E-82 568.5 23.2 254 33-294 1-283 (369)
2 4a69_A Histone deacetylase 3,; 100.0 2.6E-76 8.8E-81 560.8 23.6 258 33-294 3-274 (376)
3 3max_A HD2, histone deacetylas 100.0 1E-75 3.5E-80 554.3 23.8 258 33-294 3-273 (367)
4 1c3p_A Protein (HDLP (histone 100.0 1E-75 3.5E-80 558.0 22.4 259 33-294 2-273 (375)
5 2pqp_A HD7A, histone deacetyla 100.0 4E-75 1.4E-79 556.2 25.7 288 6-294 8-336 (421)
6 3ew8_A HD8, histone deacetylas 100.0 1.6E-74 5.6E-79 548.6 21.2 258 31-294 12-282 (388)
7 3q9b_A Acetylpolyamine amidohy 100.0 2E-73 6.9E-78 533.9 21.4 254 35-294 1-299 (341)
8 3men_A Acetylpolyamine aminohy 100.0 2.4E-73 8.3E-78 536.3 19.1 254 33-294 20-317 (362)
9 2vqm_A HD4, histone deacetylas 100.0 2.4E-72 8.3E-77 541.0 22.3 265 29-294 4-307 (413)
10 3dff_A Teicoplanin pseudoaglyc 62.5 8.2 0.00028 34.2 4.7 33 251-283 131-163 (273)
11 3dfi_A Pseudoaglycone deacetyl 61.3 9.3 0.00032 33.7 4.9 34 250-283 127-160 (270)
12 4dzz_A Plasmid partitioning pr 55.8 49 0.0017 26.5 8.2 10 191-200 31-40 (206)
13 3kjh_A CO dehydrogenase/acetyl 43.1 16 0.00054 30.4 3.2 18 185-204 24-41 (254)
14 1g3q_A MIND ATPase, cell divis 41.3 22 0.00077 29.5 3.9 15 191-205 32-46 (237)
15 1cp2_A CP2, nitrogenase iron p 41.2 26 0.0009 29.8 4.4 20 191-211 30-49 (269)
16 3pg5_A Uncharacterized protein 41.1 23 0.00079 32.2 4.2 19 191-210 31-49 (361)
17 1hyq_A MIND, cell division inh 40.4 24 0.00081 29.9 4.0 15 191-205 32-46 (263)
18 3q9l_A Septum site-determining 40.2 24 0.00081 29.7 3.9 17 191-207 32-48 (260)
19 3ea0_A ATPase, para family; al 37.1 34 0.0012 28.4 4.4 19 191-209 35-53 (245)
20 1wcv_1 SOJ, segregation protei 36.7 33 0.0011 29.2 4.3 15 191-206 36-50 (257)
21 2afh_E Nitrogenase iron protei 36.1 34 0.0012 29.6 4.3 20 191-211 31-50 (289)
22 2xj4_A MIPZ; replication, cell 34.4 38 0.0013 29.4 4.4 17 191-207 34-50 (286)
23 3hsy_A Glutamate receptor 2; l 31.4 92 0.0032 27.7 6.6 34 177-211 108-141 (376)
24 3la6_A Tyrosine-protein kinase 31.3 37 0.0013 29.9 3.7 14 191-204 122-135 (286)
25 3end_A Light-independent proto 29.9 45 0.0015 29.1 4.1 17 191-208 70-86 (307)
26 2oze_A ORF delta'; para, walke 29.3 47 0.0016 28.7 4.1 17 191-208 66-82 (298)
27 4gpa_A Glutamate receptor 4; P 28.5 1.4E+02 0.0049 26.0 7.3 31 180-210 120-150 (389)
28 3bfv_A CAPA1, CAPB2, membrane 28.3 48 0.0016 28.8 3.9 14 191-204 112-125 (271)
29 2ph1_A Nucleotide-binding prot 27.7 51 0.0017 28.0 4.0 15 191-205 48-62 (262)
30 3k9g_A PF-32 protein; ssgcid, 27.6 48 0.0016 28.1 3.8 18 191-209 56-73 (267)
31 3cio_A ETK, tyrosine-protein k 27.6 48 0.0016 29.3 3.9 15 191-205 134-148 (299)
32 3cwq_A Para family chromosome 26.2 56 0.0019 26.9 3.8 21 184-207 24-44 (209)
33 3fkq_A NTRC-like two-domain pr 25.3 47 0.0016 30.2 3.4 18 191-210 173-190 (373)
34 1uan_A Hypothetical protein TT 24.7 52 0.0018 27.9 3.4 25 258-282 85-109 (227)
35 2ixd_A LMBE-related protein; h 24.6 67 0.0023 27.6 4.1 24 258-281 87-110 (242)
36 4ep4_A Crossover junction endo 24.2 92 0.0031 25.4 4.7 36 243-278 38-73 (166)
37 4h08_A Putative hydrolase; GDS 23.4 88 0.003 24.8 4.5 29 246-278 56-84 (200)
38 3ug7_A Arsenical pump-driving 22.2 1.4E+02 0.0048 26.8 6.0 21 191-213 55-75 (349)
39 1q74_A 1D-MYO-inosityl 2-aceta 21.6 72 0.0025 28.4 3.8 27 255-281 116-144 (303)
40 2h4a_A YRAM (HI1655); perplasm 21.4 35 0.0012 30.5 1.7 41 171-212 104-144 (325)
41 3zq6_A Putative arsenical pump 21.1 74 0.0025 28.2 3.8 20 191-212 43-62 (324)
42 3mnf_A PAC2 family protein; PS 20.5 1.5E+02 0.005 25.6 5.5 91 177-280 22-124 (250)
No 1
>1zz1_A Histone deacetylase-like amidohydrolase; HET: SHH; 1.57A {Alcaligenaceae bacterium} PDB: 1zz0_A* 1zz3_A* 2gh6_A* 2vcg_A*
Probab=100.00 E-value=2.1e-77 Score=568.47 Aligned_cols=254 Identities=22% Similarity=0.340 Sum_probs=234.4
Q ss_pred CceeEEECcccCcccCCCCCC----------------CCCCChHHHHHHHHHHHCCCCCCCeeeCCCCCCHHHHhccCCH
Q 022526 33 FKLPLIYSPDYDISFLGIEKL----------------HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96 (295)
Q Consensus 33 ~~~~vvy~~~~~~h~~~~~~~----------------Hpe~p~R~~~i~~~L~~~gl~~~~~~i~p~~as~eel~~vHs~ 96 (295)
|+++++|||+|..|.++ .+ |||+|+|++.|.++|++.|+++.+++++|++|+.++|++||++
T Consensus 1 m~t~~~y~~~~~~h~~~--~~~~~~~~~g~~~~~~~~Hpe~p~R~~~i~~~l~~~gl~~~~~~~~p~~a~~~~l~~vH~~ 78 (369)
T 1zz1_A 1 MAIGYVWNTLYGWVDTG--TGSLAAANLTARMQPISHHLAHPDTKRRFHELVCASGQIEHLTPIAAVAATDADILRAHSA 78 (369)
T ss_dssp -CEEEECCGGGGGCCCC--SSSSSCCBTTTTBCCCSSCTTCTHHHHHHHHHHHHTTGGGGSEECCCCCCCHHHHHTTSCH
T ss_pred CeEEEEEchHHcccCCC--CcccccccccccccccCCCCCCHHHHHHHHHHHHhcCCCccceEeCCCcCCHHHHHHhccH
Confidence 57899999999999755 45 9999999999999999999998899999999999999999999
Q ss_pred HHHHHHhcCCCccccccCCCccccC-CccccccchhhhHhhhcHHHHHHHHHhh----cCceeeccCCCCCCCccCCCcc
Q 022526 97 SYLKSLQSSPNVSIIIEVPPVALFP-NCLVQRKVLYPFRKQVGGTILAAKLAKE----RGWAINVGGGFHHCSADEGGGF 171 (295)
Q Consensus 97 ~YI~~l~~~~~~~~~~e~~~~~~~~-d~~~~~~~~~~a~~~ag~~l~a~~~~~~----~~~a~~~~~G~HHA~~~~~~GF 171 (295)
+||++|++.+... ....++. ||++++++++++++++|+++.|++.+++ ++||++|||| |||++++++||
T Consensus 79 ~Yv~~l~~~~~~~-----~~~~l~~~dtp~~~~~~~~a~~aaG~~l~aa~~v~~g~~~~afa~~rppG-HHA~~~~a~GF 152 (369)
T 1zz1_A 79 AHLENMKRVSNLP-----TGGDTGDGITMMGNGGLEIARLSAGGAVELTRRVATGELSAGYALVNPPG-HHAPHNAAMGF 152 (369)
T ss_dssp HHHHHHHHHHHST-----TCEECSSSSCEECTTTHHHHHHHHHHHHHHHHHHHTTSCSEEEECCSSCC-TTCCTTCCBTT
T ss_pred HHHHHHHHhCccc-----cceecCCCCCCCChHHHHHHHHHHHHHHHHHHHHHhCCCcceEEEecCCc-cCcCCCCCCCc
Confidence 9999999865311 1223566 9999999999999999999999999987 4689999998 99999999999
Q ss_pred cccccHHHHHHHHHHhcCCCeEEEEecCCcCChhhhHhhhCCCCEEEEEeeCCCCCC-CCccc-------CCceeeeccC
Q 022526 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP-RDYEA-------RRFIDQKVEV 243 (295)
Q Consensus 172 C~~NnvAiaa~~l~~~~~~~rv~IiD~D~HhGnGtq~if~~d~~Vl~~Sih~~~~yP-~~~~~-------~~~~~~NvpL 243 (295)
|+|||+||||++|++++|++||+|||||||||||||+|||+||+|+|+|+|+.++|| ++|.. ++++++||||
T Consensus 153 C~fNnvAiAa~~l~~~~g~~RV~IvD~DvHHGnGTq~iF~~d~~Vl~~SiH~~~~yP~~tG~~~e~G~g~g~g~~vNvPL 232 (369)
T 1zz1_A 153 CIFNNTSVAAGYARAVLGMERVAILDWDVHHGNGTQDIWWNDPSVLTISLHQHLCFPPDSGYSTERGAGNGHGYNINVPL 232 (369)
T ss_dssp BSSCHHHHHHHHHHHTSCCSCEEEEECSSSCCHHHHHHTTTCTTEEEEEEEETTSSSTTCCCTTCCCCGGGTTCEEEEEE
T ss_pred hHhhHHHHHHHHHHHhcCCCeEEEEecCCCCchhhhHHhcCCCCEEEEeccCCCCCCCCCCcccccCCCCCCceEEeeec
Confidence 999999999999999999999999999999999999999999999999999999999 88742 3568999999
Q ss_pred CCCCChhHHHHHHHHHHHHHHhhcCCCEEEEecCCCCCCCCCCCCceeeeC
Q 022526 244 VSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKVKWG 294 (295)
Q Consensus 244 ~~g~~d~~y~~~~~~~l~~~~~~f~PdlIvvsaG~D~~~~Dplg~l~lt~~ 294 (295)
|+|++|++|+.+|++++.|++++|+||+||+|||||+|++||||+|+||++
T Consensus 233 ~~g~~d~~yl~~~~~~v~p~l~~f~PdlIvvsaG~Da~~~DpLg~l~lt~~ 283 (369)
T 1zz1_A 233 PPGSGNAAYLHAMDQVVLPALRAYRPQLIIVGSGFDASMLDPLARMMVTAD 283 (369)
T ss_dssp CTTCBHHHHHHHHHHTHHHHHHHHCCSEEEEEECCTTBTTCTTCCCBBCHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccCCCCCCCCCcccCHH
Confidence 999999999999999999999999999999999999999999999999974
No 2
>4a69_A Histone deacetylase 3,; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.6e-76 Score=560.79 Aligned_cols=258 Identities=23% Similarity=0.391 Sum_probs=233.6
Q ss_pred CceeEEECcccCcccCCCCCCCCCCChHHHHHHHHHHHCCCCCCCeeeCCCCCCHHHHhccCCHHHHHHHhcCCCcccc-
Q 022526 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSII- 111 (295)
Q Consensus 33 ~~~~vvy~~~~~~h~~~~~~~Hpe~p~R~~~i~~~L~~~gl~~~~~~i~p~~as~eel~~vHs~~YI~~l~~~~~~~~~- 111 (295)
.++.++|||+|..|.+ +++|||+|.|+++|.++|++.|+++.+++++|++|+.++|++||+++||++|++.+.....
T Consensus 3 ~~~~~~y~~~~~~~~~--g~~HPe~p~Rl~~i~~~l~~~gl~~~~~~~~p~~At~e~L~~vHs~~Yi~~l~~~~~~~~~~ 80 (376)
T 4a69_A 3 KTVAYFYDPDVGNFHY--GAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQG 80 (376)
T ss_dssp CCEEEECCTTTTCCCC--CTTCSCCTHHHHHHHHHHHHTTGGGGSEEECCCCCCHHHHTTTSCHHHHHHHHHCCTTTGGG
T ss_pred CeEEEEEChHHhCcCC--CCCCCcCHHHHHHHHHHHHhcCCCCCceEeCCCCCCHHHHHHhCCHHHHHHHHHhCcccchh
Confidence 5789999999998864 4789999999999999999999999999999999999999999999999999987753210
Q ss_pred --ccCCCccccCCccccccchhhhHhhhcHHHHHHHHHhhc--CceeeccCCCCCCCccCCCcccccccHHHHHHHHHHh
Q 022526 112 --IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER--GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQ 187 (295)
Q Consensus 112 --~e~~~~~~~~d~~~~~~~~~~a~~~ag~~l~a~~~~~~~--~~a~~~~~G~HHA~~~~~~GFC~~NnvAiaa~~l~~~ 187 (295)
.+.....+++||++++++++++++++||++.|++.++++ ++|++++||+|||++++++|||+|||+||||++|+++
T Consensus 81 ~~~~~~~~~l~~Dtpv~~~~~e~a~~aaGgtl~Aa~~v~~g~~~~A~~~~gG~HHA~~~~a~GFC~~NdvAiAa~~l~~~ 160 (376)
T 4a69_A 81 FTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKY 160 (376)
T ss_dssp GHHHHHHHTCSSSSCCCTTHHHHHHHHHHHHHHHHHHHHTTSCSEEEETTCCCTTCBTTBCBTTBSSCHHHHHHHHHTTT
T ss_pred hhhhhceeccCCCCCcchHHHHHHHHHHHHHHHHHHHHHcCCcceeeeCCCCCCcCCcCCCCcchhhhHHHHHHHHHHHh
Confidence 011112356799999999999999999999999988764 5899999999999999999999999999999999886
Q ss_pred cCCCeEEEEecCCcCChhhhHhhhCCCCEEEEEeeCCC--CCCCCcc-------cCCceeeeccCCCCCChhHHHHHHHH
Q 022526 188 LNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG--IYPRDYE-------ARRFIDQKVEVVSGTTTNEYLKKLDE 258 (295)
Q Consensus 188 ~~~~rv~IiD~D~HhGnGtq~if~~d~~Vl~~Sih~~~--~yP~~~~-------~~~~~~~NvpL~~g~~d~~y~~~~~~ 258 (295)
.+||+|||||||||||||+|||+||+|+|+|+|+.+ |||+||. .++++++|||||+|++|++|+.+|++
T Consensus 161 --~~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~~~~~~fPgtG~~~e~G~g~g~g~~vNvPL~~G~~D~~yl~~~~~ 238 (376)
T 4a69_A 161 --HPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQP 238 (376)
T ss_dssp --CSCEEEEECSSSCCHHHHHHTTTCSSEEEEEEEECSTTCTTCCCCTTCCCCGGGTTSEEEEEECTTCBHHHHHHHHHH
T ss_pred --CCcEEEEeccCCCCcchhhHhcCCCCEEEEecccCCCcCCCCCCCccccCCCCCCceeEeeecCCCCCHHHHHHHHHH
Confidence 489999999999999999999999999999999865 8999874 23568999999999999999999999
Q ss_pred HHHHHHhhcCCCEEEEecCCCCCCCCCCCCceeeeC
Q 022526 259 ALEVAGHTFDPELVIYNAGTDILEGDPLGMLKVKWG 294 (295)
Q Consensus 259 ~l~~~~~~f~PdlIvvsaG~D~~~~Dplg~l~lt~~ 294 (295)
+|.|++++|+||+||+|||||+|++||||+|+||++
T Consensus 239 ~l~p~~~~f~Pd~IvvsaG~Da~~~DpLg~l~Lt~~ 274 (376)
T 4a69_A 239 VINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIR 274 (376)
T ss_dssp HHHHHHHHHCCSEEEEECCGGGBTTCSSCCCBBCHH
T ss_pred HHHHHHHHhCCCEEEEeCcccCCCCCcccCeecCHH
Confidence 999999999999999999999999999999999974
No 3
>3max_A HD2, histone deacetylase 2; class 2, HDAC, foot pocket, hydrolase; HET: LLX NHE; 2.05A {Homo sapiens}
Probab=100.00 E-value=1e-75 Score=554.26 Aligned_cols=258 Identities=24% Similarity=0.407 Sum_probs=234.0
Q ss_pred CceeEEECcccCcccCCCCCCCCCCChHHHHHHHHHHHCCCCCCCeeeCCCCCCHHHHhccCCHHHHHHHhcCCCccccc
Q 022526 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIII 112 (295)
Q Consensus 33 ~~~~vvy~~~~~~h~~~~~~~Hpe~p~R~~~i~~~L~~~gl~~~~~~i~p~~as~eel~~vHs~~YI~~l~~~~~~~~~~ 112 (295)
.+++++|||+|..|+++ ++|||+|.|+++|.++|++.|+++.+++++|++|+.++|++||+++||++|++.++.....
T Consensus 3 ~~v~~~y~~~~~~~~~g--~~HPe~P~Rl~~i~~~L~~~gl~~~~~~~~p~~At~e~L~~vHs~~Yi~~l~~~~~~~~~~ 80 (367)
T 3max_A 3 KKVCYYYDGDIGNYYYG--QGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSE 80 (367)
T ss_dssp CCEEEECCGGGGGCCCC--TTCSCCTHHHHHHHHHHHHTTGGGGSEEECCCCCCHHHHTTTSCHHHHHHHHHCCGGGGGG
T ss_pred CeEEEEECccccCcCCC--CCCCCCHHHHHHHHHHHHhcCCcccCeeeCCCCCCHHHHHhhCCHHHHHHHHHhCccccch
Confidence 57899999999998755 7899999999999999999999999999999999999999999999999999877532110
Q ss_pred ---cCCCccccCCccccccchhhhHhhhcHHHHHHHHHhh--cCceeeccCCCCCCCccCCCcccccccHHHHHHHHHHh
Q 022526 113 ---EVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE--RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQ 187 (295)
Q Consensus 113 ---e~~~~~~~~d~~~~~~~~~~a~~~ag~~l~a~~~~~~--~~~a~~~~~G~HHA~~~~~~GFC~~NnvAiaa~~l~~~ 187 (295)
+.....+.+||++++++++++++++||++.|++.+++ .++|++++||+|||++++++|||+|||+||||++|++.
T Consensus 81 ~~~~~~~~~l~~Dtp~~~~~~e~a~~aaGgsl~aa~~v~~~~~~~Ai~~pgG~HHA~~~~a~GFC~~NdvaiAa~~l~~~ 160 (367)
T 3max_A 81 YSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKY 160 (367)
T ss_dssp CHHHHHHTTCSSSSCCCTTHHHHHHHHHHHHHHHHHHHHTTSCSEEEETTCCCTTCBTTBCBTTBCSCHHHHHHHHHTTT
T ss_pred hhhHhhhcCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcccCcceEecCCCCCCcCCcCCCCCchhhhHHHHHHHHHHHc
Confidence 0011235689999999999999999999999998874 46899999999999999999999999999999999875
Q ss_pred cCCCeEEEEecCCcCChhhhHhhhCCCCEEEEEeeCCC-CCCCCcc-------cCCceeeeccCCCCCChhHHHHHHHHH
Q 022526 188 LNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG-IYPRDYE-------ARRFIDQKVEVVSGTTTNEYLKKLDEA 259 (295)
Q Consensus 188 ~~~~rv~IiD~D~HhGnGtq~if~~d~~Vl~~Sih~~~-~yP~~~~-------~~~~~~~NvpL~~g~~d~~y~~~~~~~ 259 (295)
.+||+|||||||||||||+|||+||+|+|+|+|+.+ +||+||. .++++++|||||+|++|++|+.+|+++
T Consensus 161 --~~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~~~~~fPgtg~~~e~G~g~g~g~~vNvPL~~g~~d~~y~~~~~~~ 238 (367)
T 3max_A 161 --HQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPI 238 (367)
T ss_dssp --CSCEEEEECSSSCCHHHHHHTTTCSSEEEEEEEECSSCTTCCCCTTCCCCGGGTTCEEEEEECTTCCHHHHHHHHHHH
T ss_pred --CCcEEEEecCCCCCchhhHHhcCCCCEEEEecccCCCCCCCCCCccccCCCCCCceEEEEecCCCCCHHHHHHHHHHH
Confidence 489999999999999999999999999999999975 8999874 235689999999999999999999999
Q ss_pred HHHHHhhcCCCEEEEecCCCCCCCCCCCCceeeeC
Q 022526 260 LEVAGHTFDPELVIYNAGTDILEGDPLGMLKVKWG 294 (295)
Q Consensus 260 l~~~~~~f~PdlIvvsaG~D~~~~Dplg~l~lt~~ 294 (295)
|.|++++|+||+||+|||||+|++||||.|+||++
T Consensus 239 ~~~~~~~f~Pd~ivvsaG~D~~~~Dplg~~~lt~~ 273 (367)
T 3max_A 239 ISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVK 273 (367)
T ss_dssp HHHHHHHHCCSEEEEECCGGGBTTCSSCCCCBCHH
T ss_pred HHHHHHHhCCCEEEEECCccCcCCCCCCCeeeCHH
Confidence 99999999999999999999999999999999964
No 4
>1c3p_A Protein (HDLP (histone deacetylase-like protein) ); alpha/beta fold, lyase; 1.80A {Aquifex aeolicus} SCOP: c.42.1.2 PDB: 1c3r_A* 1c3s_A*
Probab=100.00 E-value=1e-75 Score=557.96 Aligned_cols=259 Identities=24% Similarity=0.375 Sum_probs=232.2
Q ss_pred CceeEEECcccCcccCCCCCCCCCCChHHHHHHHHHHHCCCCCCCeeeCCCCCCHHHHhccCCHHHHHHHhcCCCccc--
Q 022526 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSI-- 110 (295)
Q Consensus 33 ~~~~vvy~~~~~~h~~~~~~~Hpe~p~R~~~i~~~L~~~gl~~~~~~i~p~~as~eel~~vHs~~YI~~l~~~~~~~~-- 110 (295)
++++++|||+|..|.+ +++|||+|+|++.|.++|++.|+++.+++++|++|+.++|++||+++||++|++.+....
T Consensus 2 ~~t~~vy~~~~~~h~~--g~~Hpe~p~R~~~i~~~l~~~gl~~~~~~~~p~~at~~~l~~vH~~~Yv~~l~~~~~~~~~~ 79 (375)
T 1c3p_A 2 KKVKLIGTLDYGKYRY--PKNHPLKIPRVSLLLRFKDAMNLIDEKELIKSRPATKEELLLFHTEDYINTLMEAERCQCVP 79 (375)
T ss_dssp CCEEEEECGGGGGSCC--CTTCGGGSCCHHHHHHHHHHTTCCCGGGEEECCCCCHHHHTTTSCHHHHHHHHHHHHHTSCC
T ss_pred ceEEEEECHHHcCCCC--CCCCCCCHHHHHHHHHHHHhcCCCCCCeEeCCCCCCHHHHHHhCCHHHHHHHHHhccccCCC
Confidence 3589999999999864 478999999999999999999999989999999999999999999999999987543210
Q ss_pred cccCCCccc-cCCccccccchhhhHhhhcHHHHHHHHHhhcCceeeccCCCCCCCccCCCcccccccHHHHHHHHHHhcC
Q 022526 111 IIEVPPVAL-FPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN 189 (295)
Q Consensus 111 ~~e~~~~~~-~~d~~~~~~~~~~a~~~ag~~l~a~~~~~~~~~a~~~~~G~HHA~~~~~~GFC~~NnvAiaa~~l~~~~~ 189 (295)
..+.....+ ++||++++++++++++++||++.|++.+++++.|+++|||+|||++++++|||+|||+||||++|+++ +
T Consensus 80 ~~~~~~~~l~~~dtp~~~~~~~~a~~aaGg~l~aa~~v~~g~~a~~ppGG~HHA~~~~a~GFC~fNnvAiAa~~l~~~-g 158 (375)
T 1c3p_A 80 KGAREKYNIGGYENPVSYAMFTGSSLATGSTVQAIEEFLKGNVAFNPAGGMHHAFKSRANGFCYINNPAVGIEYLRKK-G 158 (375)
T ss_dssp TTHHHHHCCSSSSSCSSTTTTHHHHHHHHHHHHHHHHHHTTCEEEETTCCCTTCBTTBCBTTBSSCHHHHHHHHHHHT-T
T ss_pred hHHhhccccCCCCcccChhHHHHHHHHhhHHHHHHHHHHcCCceeecCcccceeeeccCCCceeecHHHHHHHHHHHh-C
Confidence 000001123 58999999999999999999999999999988888888888999999999999999999999999877 5
Q ss_pred CCeEEEEecCCcCChhhhHhhhCCCCEEEEEeeCCC--CCCCCccc--------CCceeeeccCCCCCChhHHHHHHHHH
Q 022526 190 ISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG--IYPRDYEA--------RRFIDQKVEVVSGTTTNEYLKKLDEA 259 (295)
Q Consensus 190 ~~rv~IiD~D~HhGnGtq~if~~d~~Vl~~Sih~~~--~yP~~~~~--------~~~~~~NvpL~~g~~d~~y~~~~~~~ 259 (295)
.+||+|||||||||||||+|||+||+|+|+|+|+.+ |||+||.. ++++++|||||+|++|++|+.+|+++
T Consensus 159 ~~RV~IvD~DvHHGnGtq~iF~~dp~Vl~~SiH~~~~~ffPgtG~~~e~G~~g~g~g~~vNvPL~~g~~D~~yl~a~~~~ 238 (375)
T 1c3p_A 159 FKRILYIDLDAHHCDGVQEAFYDTDQVFVLSLHQSPEYAFPFEKGFLEEIGEGKGKGYNLNIPLPKGLNDNEFLFALEKS 238 (375)
T ss_dssp CCCEEEEECSSSCCHHHHHHHTTCSSEEEEEEEECTTTSTTSSSCCTTCCCCGGGTTSEEEEEECTTCCHHHHHHHHHHH
T ss_pred CCeEEEEecCCCCCHHHHHHhccCCCEEEEecccCCCCCCCCCCCccccCCcCCCCceEEEEeCCCCCCHHHHHHHHHHH
Confidence 799999999999999999999999999999999975 67998731 33689999999999999999999999
Q ss_pred HHHHHhhcCCCEEEEecCCCCCCCCCCCCceeeeC
Q 022526 260 LEVAGHTFDPELVIYNAGTDILEGDPLGMLKVKWG 294 (295)
Q Consensus 260 l~~~~~~f~PdlIvvsaG~D~~~~Dplg~l~lt~~ 294 (295)
|.|++++|+||+||+|||||+|++||||+|+||++
T Consensus 239 l~p~l~~F~PdlIvvsaG~Da~~~DpLg~l~lt~~ 273 (375)
T 1c3p_A 239 LEIVKEVFEPEVYLLQLGTDPLLEDYLSKFNLSNV 273 (375)
T ss_dssp HHHHHHHCCCSEEEEECCSTTBTTCTTCSCCBCHH
T ss_pred HHHHHHHhCCCEEEEECCccccCCCCCCCcccCHH
Confidence 99999999999999999999999999999999974
No 5
>2pqp_A HD7A, histone deacetylase 7A; HDAC, structural genomics, structural genomics consortium, SGC; HET: TSN; 1.80A {Homo sapiens} PDB: 2pqo_A* 2nvr_A 3c0y_A 3c0z_A 3c10_A* 2vqm_A* 2vqj_A* 2vqw_G 2vqq_A* 2vqo_A* 2vqv_A*
Probab=100.00 E-value=4e-75 Score=556.16 Aligned_cols=288 Identities=23% Similarity=0.303 Sum_probs=230.7
Q ss_pred CCCCCCcHHHHhhhhccccccccccC-CCceeEEECcccCcccCC--CCCCCCCCChHHHHHHHHHHHCCCCCCCeeeCC
Q 022526 6 SPSVTTDAETLKRNRILSSKLYFDIP-IFKLPLIYSPDYDISFLG--IEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82 (295)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~vvy~~~~~~h~~~--~~~~Hpe~p~R~~~i~~~L~~~gl~~~~~~i~p 82 (295)
+|.+++..++..+...+++.-.-..| .++++++||++|..|.+. .++.|||+|.|++.|+++|++.||++.+++++|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~vyd~~~l~H~~~~~~~~~HPE~P~Rl~~i~~~L~~~Gl~~~~~~~~p 87 (421)
T 2pqp_A 8 APASLSAPEPASQARVLSSSETPARTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRG 87 (421)
T ss_dssp -------------------------CCTTCEEEECCGGGGGCCCTTCCTTSCSSCTHHHHHHHHHHHHTTCGGGSEEECC
T ss_pred CccccCCCCCCccccccCCCCCCCCCCCCeEEEEECHHHHhhccCCCCCCCCCCCcHHHHHHHHHHHhcCCcccCeeeCC
Confidence 55566666666665556655455566 488999999999999754 346899999999999999999999999999999
Q ss_pred CCCCHHHHhccCCHHHHHHHhcCCCcc-c-------------cc---cCCCccccCCccccc-cchhhhHhhhcHHHHHH
Q 022526 83 LEASKEDLLVVHSESYLKSLQSSPNVS-I-------------II---EVPPVALFPNCLVQR-KVLYPFRKQVGGTILAA 144 (295)
Q Consensus 83 ~~as~eel~~vHs~~YI~~l~~~~~~~-~-------------~~---e~~~~~~~~d~~~~~-~~~~~a~~~ag~~l~a~ 144 (295)
++|++|||++||+++||+.+....... + .. ..+...+++|+++++ .+++++++++|+++.|+
T Consensus 88 ~~At~eeL~~vHs~~YI~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~p~gg~~~D~Dt~~~~~~s~~aa~~aaG~~~~a~ 167 (421)
T 2pqp_A 88 RKASLEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLA 167 (421)
T ss_dssp CCCCHHHHTTTSCHHHHHHHHCCTTCSCCCCHHHHHHHHSCCCCEECTTSCEESSSSCEECTTTHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHhcCCHHHHHhhhcchhhhhhhhcccccccchhhhhhhccccCcCCCCCcccCCccHHHHHHHHHhHHHHHH
Confidence 999999999999999998654321100 0 00 001233567888874 89999999999999999
Q ss_pred HHHhh----cCceeeccCCCCCCCccCCCcccccccHHHHHHHHHHhcCCCeEEEEecCCcCChhhhHhhhCCCCEEEEE
Q 022526 145 KLAKE----RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILD 220 (295)
Q Consensus 145 ~~~~~----~~~a~~~~~G~HHA~~~~~~GFC~~NnvAiaa~~l~~~~~~~rv~IiD~D~HhGnGtq~if~~d~~Vl~~S 220 (295)
+.+++ ++||++|||| |||++++++|||+|||+||||++|+++++++||+|||||||||||||+|||+||+|+|||
T Consensus 168 ~~v~~g~~~~afa~~rPpG-HHA~~~~a~GFC~fNnvAiAa~~l~~~~~~~RV~ivD~DvHHGnGtq~iF~~dp~Vl~~S 246 (421)
T 2pqp_A 168 FKVASRELKNGFAVVRPPG-HHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGNGTQQTFYQDPSVLYIS 246 (421)
T ss_dssp HHHHTTSSSEEEECCSSCC-TTCBTTBCBTTBSSCHHHHHHHHHHHHSTTCCEEEEECSSSCCHHHHHHHTTCTTEEEEE
T ss_pred HHHHcCccccceeeCCCCC-CCCCCCCCCcchhhCHHHHHHHHHHHhcCCCeEEEEecCCCCChhHHHHhcCCCCEEEEe
Confidence 99975 4699999998 999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCC---CCCCCCcc-------cCCceeeeccCCC----CCChhHHHHHHHHHHHHHHhhcCCCEEEEecCCCCCCCC--
Q 022526 221 MFNP---GIYPRDYE-------ARRFIDQKVEVVS----GTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGD-- 284 (295)
Q Consensus 221 ih~~---~~yP~~~~-------~~~~~~~NvpL~~----g~~d~~y~~~~~~~l~~~~~~f~PdlIvvsaG~D~~~~D-- 284 (295)
+|+. +|||++|. .+.++|+||||+. +++|++|+.+|+++|.|++++|+||+||+|||||+|++|
T Consensus 247 ~H~~~~g~~yPgtG~~~e~G~g~g~g~~vNvPl~~gl~~g~~d~~yl~~~~~~l~p~~~~F~PdlIvvsaG~Da~~gD~d 326 (421)
T 2pqp_A 247 LHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPA 326 (421)
T ss_dssp EEECGGGTSTTCCCCTTCCCCGGGTTCEEEEEECSCSSSCCBHHHHHHHHHHTHHHHHHHHCCSEEEEEECCTTBTTCCG
T ss_pred cccCCCCCCCCCCCChhhccCCCCccceeccccCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCEEEEeCCccccccccc
Confidence 9985 59999874 2457899999975 579999999999999999999999999999999999987
Q ss_pred CCCCceeeeC
Q 022526 285 PLGMLKVKWG 294 (295)
Q Consensus 285 plg~l~lt~~ 294 (295)
|||+|+||++
T Consensus 327 pLg~~~lt~~ 336 (421)
T 2pqp_A 327 PLGGYHVSAK 336 (421)
T ss_dssp GGCCCBBCHH
T ss_pred ccCCceeCHH
Confidence 9999999964
No 6
>3ew8_A HD8, histone deacetylase 8; hydrolase, HDAC, metalloenzyme, arginase fold, HDAC8, histon deacetylase, hydroxamate inhibitor, unliganded; HET: B3N; 1.80A {Homo sapiens} SCOP: c.42.1.2 PDB: 3f06_A* 3ezp_A* 3ezt_A* 3f0r_A* 3f07_A* 2v5w_A* 2v5x_A* 3ewf_A* 3mz4_A* 3mz6_A* 3mz7_A* 3rqd_A* 3mz3_A* 1t64_A* 1t67_A* 1t69_A* 1vkg_A* 1w22_A* 3sff_A* 3sfh_A*
Probab=100.00 E-value=1.6e-74 Score=548.58 Aligned_cols=258 Identities=25% Similarity=0.378 Sum_probs=230.3
Q ss_pred CCCceeEEECcccCcccCCCCCCCCCCChHHHHHHHHHHHCCCCCCCeeeCCCCCCHHHHhccCCHHHHHHHhcCCCccc
Q 022526 31 PIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSI 110 (295)
Q Consensus 31 ~~~~~~vvy~~~~~~h~~~~~~~Hpe~p~R~~~i~~~L~~~gl~~~~~~i~p~~as~eel~~vHs~~YI~~l~~~~~~~~ 110 (295)
+..++.++|||+|..|. .+|||+|+|+++|.++|++.|+++.+++++|++|+.++|++||+++||++|++.+....
T Consensus 12 ~~~~~~~~y~~~~~~~~----~~HPe~P~Rl~~i~~ll~~~gl~~~~~~~~p~~At~e~L~~vHs~~Yi~~l~~~~~~~~ 87 (388)
T 3ew8_A 12 QSLVPVYIYSPEYVSMC----DSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGD 87 (388)
T ss_dssp --CCCEEECCHHHHHHH----TTCTTSTTHHHHHHHHHHHTTGGGGSEEECCCCCCHHHHTTTSCHHHHHHHHHHHHHC-
T ss_pred CCCcEEEEEChHHhccC----CCCCCCcHHHHHHHHHHHHcCCcccCeEeCCCCCCHHHHHhhCCHHHHHHHHHhccccc
Confidence 35689999999998863 57999999999999999999999999999999999999999999999999997653221
Q ss_pred c--ccCCCccccCCccccccchhhhHhhhcHHHHHHHHHhhc--CceeeccCCCCCCCccCCCcccccccHHHHHHHHHH
Q 022526 111 I--IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER--GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFV 186 (295)
Q Consensus 111 ~--~e~~~~~~~~d~~~~~~~~~~a~~~ag~~l~a~~~~~~~--~~a~~~~~G~HHA~~~~~~GFC~~NnvAiaa~~l~~ 186 (295)
. .+.....+..||++++++++++++++|+++.|++.++++ ++|++++||+|||++++++|||+|||+||||++|++
T Consensus 88 ~~~~~~~~~~lg~Dtp~~~~~~e~a~~aaGgsl~Aa~~v~~g~~~~Ai~~pGG~HHA~~~~a~GFC~~NdiaiAa~~l~~ 167 (388)
T 3ew8_A 88 DDHPDSIEYGLGYLCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRR 167 (388)
T ss_dssp -------CCSCSSSSCCCTTHHHHHHHHHHHHHHHHHHHHTTSCSEEEETTCCCTTCBTTBCBTTBSSCHHHHHHHHHTT
T ss_pred ccchhhhhccCCCCCCCChhHHHHHHHHHHHHHHHHHHHHcCCCceeeecCCcccceeecCCCCchhhhHHHHHHHHHHh
Confidence 1 011122345799999999999999999999999999975 589999998899999999999999999999999986
Q ss_pred hcCCCeEEEEecCCcCChhhhHhhhCCCCEEEEEeeCC--CCCCCCcc-------cCCceeeeccCCCCCChhHHHHHHH
Q 022526 187 QLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNP--GIYPRDYE-------ARRFIDQKVEVVSGTTTNEYLKKLD 257 (295)
Q Consensus 187 ~~~~~rv~IiD~D~HhGnGtq~if~~d~~Vl~~Sih~~--~~yP~~~~-------~~~~~~~NvpL~~g~~d~~y~~~~~ 257 (295)
. .+||+|||||||||||||+|||+||+|+|+|+|+. +|||+||. .++++++|||||+|++|++|+.+|+
T Consensus 168 ~--~~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~~~~~~fPgtG~~~e~G~g~g~g~~vNvPL~~G~~d~~y~~~~~ 245 (388)
T 3ew8_A 168 K--FERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICE 245 (388)
T ss_dssp T--CSCEEEEECSSSCCHHHHHHTTTCSSEEEEEEEECCTTCTTCCCCTTCCCCGGGTTSEEEEEECTTCCHHHHHHHHH
T ss_pred c--CCeEEEEecCCCCChhHHHHhccCCCEEEEecCCCCCCCCCCCCCcccccCCCCcceeeeccCCCCCCHHHHHHHHH
Confidence 4 68999999999999999999999999999999985 59999874 2456899999999999999999999
Q ss_pred HHHHHHHhhcCCCEEEEecCCCCCCCCCCCCceeeeC
Q 022526 258 EALEVAGHTFDPELVIYNAGTDILEGDPLGMLKVKWG 294 (295)
Q Consensus 258 ~~l~~~~~~f~PdlIvvsaG~D~~~~Dplg~l~lt~~ 294 (295)
++|.|++++|+||+||+|||||+|++||||+|+||++
T Consensus 246 ~~l~p~~~~F~PdlIvvsaG~Da~~~DpLg~l~lt~~ 282 (388)
T 3ew8_A 246 SVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPV 282 (388)
T ss_dssp HHHHHHHHHHCCSEEEEECCSTTBTTCTTCCCCBCHH
T ss_pred HHHHHHHHHhCCCEEEEECCccCCCCCCCCCCcCCHH
Confidence 9999999999999999999999999999999999964
No 7
>3q9b_A Acetylpolyamine amidohydrolase; HDAC, polyamines, arginase fold, deacetylase, hydrolase-HYDR inhibitor complex; HET: B3N; 2.25A {Mycoplana ramosa} PDB: 3q9f_A* 3q9c_A* 3q9e_A*
Probab=100.00 E-value=2e-73 Score=533.92 Aligned_cols=254 Identities=20% Similarity=0.265 Sum_probs=223.3
Q ss_pred eeEEECcccCcccCCCC------CCCCCCChHHHHHHHHHHHCCCCCCCeeeCCCCCCHHHHhccCCHHHHHHHhcCCCc
Q 022526 35 LPLIYSPDYDISFLGIE------KLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNV 108 (295)
Q Consensus 35 ~~vvy~~~~~~h~~~~~------~~Hpe~p~R~~~i~~~L~~~gl~~~~~~i~p~~as~eel~~vHs~~YI~~l~~~~~~ 108 (295)
+.++|||+|..|..+.. ..|||+|+|+++|.++|++.|+. ++++|++|+.++|++||+++||++|++.+..
T Consensus 1 m~~v~~~~~~~H~~~~~~~~G~~~~HPE~P~Rl~~i~~~L~~~gl~---~~~~p~~at~e~L~~vHs~~Yi~~l~~~~~~ 77 (341)
T 3q9b_A 1 MRVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFD---DVVAPARHGLETVLKVHDAGYLNFLETAWDR 77 (341)
T ss_dssp CEEECCGGGGGCCCSCEEETTEEECCSSCTHHHHHHHHHHHHTTCC---CEECCCCCCSTTGGGTSCHHHHHHHHHHHHH
T ss_pred CEEEECcHHhccCCcccccCCCcCCCCCChHHHHHHHHHHHhCCCC---ceeCCCCCCHHHHHHhCCHHHHHHHHHhhhh
Confidence 46899999999975421 25999999999999999999985 5789999999999999999999999875421
Q ss_pred c-----c---ccc-C-----------------CCccccCCccccccchhhhHhhhcHHHHHHHHHhhc---CceeeccCC
Q 022526 109 S-----I---IIE-V-----------------PPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER---GWAINVGGG 159 (295)
Q Consensus 109 ~-----~---~~e-~-----------------~~~~~~~d~~~~~~~~~~a~~~ag~~l~a~~~~~~~---~~a~~~~~G 159 (295)
. . ..+ . +...+++||++++++|+++++++|+++.|++.++++ +||++||||
T Consensus 78 ~~~~~~~~~~~~~~~p~~~~~~~~p~~~~~~~g~~~~d~dt~~~~~~~~aa~~aaG~~l~a~~~v~~g~~~afal~rppG 157 (341)
T 3q9b_A 78 WKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPG 157 (341)
T ss_dssp HHHTTCSSCBCCCBCCCTTCCCCCCSSHHHHHHHTBSBTTCCBCTTHHHHHHHHHHHHHHHHHHHHHTCSEEEECCSSCC
T ss_pred hhhcccccccccccccccccccccccchhcccceeccCCCCCcChhHHHHHHHHHHHHHHHHHHHHhCCCceEecCCCCC
Confidence 0 0 000 0 012357899999999999999999999999999864 689999998
Q ss_pred CCCCCccCCCcccccccHHHHHHHHHHhcCCCeEEEEecCCcCChhhhHhhhCCCCEEEEEeeCC--CCCCC-Ccc----
Q 022526 160 FHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNP--GIYPR-DYE---- 232 (295)
Q Consensus 160 ~HHA~~~~~~GFC~~NnvAiaa~~l~~~~~~~rv~IiD~D~HhGnGtq~if~~d~~Vl~~Sih~~--~~yP~-~~~---- 232 (295)
|||++++++|||+|||+||||++|+++ |++||+|||||+|||||||+|||+||+|+|+|+|+. .+||+ +|.
T Consensus 158 -HHA~~~~a~GFC~~NnvaiAa~~l~~~-g~~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~~~~~~yP~~tG~~~e~ 235 (341)
T 3q9b_A 158 -HHAGIDMFGGYCFINNAAVAAQRLLDK-GAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHGDPAEAFPHFLGYAEET 235 (341)
T ss_dssp -TTCBTTBBBTTBSSCHHHHHHHHHHHT-TCSCEEEEECSSSCCHHHHHHHTTCTTEEEEEEEECGGGSTTCSSCCTTCC
T ss_pred -CCCCCCCCCCccccCHHHHHHHHHHHc-CCCeEEEEecCCCCCcchhHHhcCCCCEEEEeccCCCccCCCCCCCccccc
Confidence 999999999999999999999999986 699999999999999999999999999999999996 49998 553
Q ss_pred ---cCCceeeeccCCCCCChhHHHHHHHHHHHHHHhhcCCCEEEEecCCCCCCCCCCCCceeeeC
Q 022526 233 ---ARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKVKWG 294 (295)
Q Consensus 233 ---~~~~~~~NvpL~~g~~d~~y~~~~~~~l~~~~~~f~PdlIvvsaG~D~~~~Dplg~l~lt~~ 294 (295)
.++++++|||||+|++|++|+.+|+++|. .+++|+||+||+|||||+|++||||+|+||++
T Consensus 236 G~g~g~g~~vNvpL~~g~~d~~y~~~~~~~l~-~l~~f~Pd~ivvsaG~D~~~~Dplg~~~lt~~ 299 (341)
T 3q9b_A 236 GKGAGAGTTANYPMGRGTPYSVWGEALTDSLK-RIAAFGAEAIVVSLGVDTFEQDPISFFKLTSP 299 (341)
T ss_dssp CCGGGTTCEEEEEECTTCBHHHHHHHHHHHHH-HHHHHTCSCEEEEECCTTBTTCTTCCCBBCTT
T ss_pred CCCCCCceeEeeecCCCCChHHHHHHHHHHHH-HHHhhCCCEEEEeCCccccCCCCCCCccCCHH
Confidence 23578999999999999999999999874 67999999999999999999999999999975
No 8
>3men_A Acetylpolyamine aminohydrolase; histone deacetylase; 2.20A {Burkholderia pseudomallei 1710B}
Probab=100.00 E-value=2.4e-73 Score=536.25 Aligned_cols=254 Identities=19% Similarity=0.295 Sum_probs=222.5
Q ss_pred CceeEEECcccCcccCCCC------CCCCCCChHHHHHHHHHHHCCCCCCCeeeCCCCCCHHHHhccCCHHHHHHHhcCC
Q 022526 33 FKLPLIYSPDYDISFLGIE------KLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSP 106 (295)
Q Consensus 33 ~~~~vvy~~~~~~h~~~~~------~~Hpe~p~R~~~i~~~L~~~gl~~~~~~i~p~~as~eel~~vHs~~YI~~l~~~~ 106 (295)
+.+.++|||+|..|..+.. ..|||+|+|+++|.++|++.|+ ++++|++|+.++|++||+++||++|++.+
T Consensus 20 ~~M~~~~~~~~~~H~~~~~~~~G~~~~HPE~P~Rl~~i~~~L~~~gl----~~~~p~~At~e~L~~vHs~~YI~~l~~~~ 95 (362)
T 3men_A 20 GSMLTYFHPDQSLHHPRTYFSRGRMRMPQEVPERAARLVAAAFAMGF----PVREPDDFGIAPIAAVHDTHYLRFLETVH 95 (362)
T ss_dssp -CCEEECCGGGGGCCCCCEEETTEEECCCSCTHHHHHHHHHHHHTTC----CEECCCCCCSHHHHTTSCHHHHHHHHHHH
T ss_pred CceEEEEChHHHhhCCccccccCCcCCCCCChHHHHHHHHHHHhCCC----eEeCCCCCCHHHHHHhCCHHHHHHHHHhh
Confidence 4467999999999975421 2699999999999999999997 68999999999999999999999998754
Q ss_pred Cccc------ccc-CC------------------CccccCCccccccchhhhHhhhcHHHHHHHHHhhc---CceeeccC
Q 022526 107 NVSI------IIE-VP------------------PVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER---GWAINVGG 158 (295)
Q Consensus 107 ~~~~------~~e-~~------------------~~~~~~d~~~~~~~~~~a~~~ag~~l~a~~~~~~~---~~a~~~~~ 158 (295)
.... ..+ ++ ...+++||++++++|+++++++|+++.|++.++++ +||++|||
T Consensus 96 ~~~~~~~~~~~~e~~p~~~p~~~~~p~~~~~~~g~~~~d~Dtpv~~~~~~aa~~aaG~~l~aa~~v~~g~~~afal~rPp 175 (362)
T 3men_A 96 REWKAMPEDWGDEAMSNIFVREPNALRGVLAQAARHLADGSCPVGEHTWRAAYWSAQSALAAAAAVRDGAPAAYALCRPP 175 (362)
T ss_dssp HHHHTSCGGGCSSBCCCBCCCSSCCCCSHHHHHHHHBCBTTCCBCTTHHHHHHHHHHHHHHHHHHHHTTCSEEEECCSSC
T ss_pred hhhhhcccccccccccccccccccccccccccccccccCCCCccchhHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCC
Confidence 2100 000 00 02357899999999999999999999999999864 69999998
Q ss_pred CCCCCCccCCCcccccccHHHHHHHHHHhcCCCeEEEEecCCcCChhhhHhhhCCCCEEEEEeeCC--CCCCC-Ccc---
Q 022526 159 GFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNP--GIYPR-DYE--- 232 (295)
Q Consensus 159 G~HHA~~~~~~GFC~~NnvAiaa~~l~~~~~~~rv~IiD~D~HhGnGtq~if~~d~~Vl~~Sih~~--~~yP~-~~~--- 232 (295)
| |||++++++|||+|||+||||++|+++ .+||+|||||||||||||+|||+||+|+|+|+|+. ++||+ +|.
T Consensus 176 G-HHA~~~~a~GFC~fNnvAiAa~~l~~~--~~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~~~~~~yP~~tG~~~e 252 (362)
T 3men_A 176 G-HHARVDAAGGFCYLNNAAIAAQALRAR--HARVAVLDTDMHHGQGIQEIFYARRDVLYVSIHGDPTNFYPAVAGFDDE 252 (362)
T ss_dssp C-TTCBTTBBBTTBSSCHHHHHHHHHTTT--CSCEEEEECSSSCCHHHHHHTTTCSSEEEEEEEECCTTSTTCSSCCTTC
T ss_pred C-CCCCCCCCCCccccCHHHHHHHHHHHc--CCeEEEEeCcCCCchhHhHHhcCCCCEEEEEecCCCccCCCCCCCcccc
Confidence 7 999999999999999999999999987 59999999999999999999999999999999996 59998 553
Q ss_pred ----cCCceeeeccCCCCCChhHHHHHHHHHHHHHHhhcCCCEEEEecCCCCCCCCCCCCceeeeC
Q 022526 233 ----ARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKVKWG 294 (295)
Q Consensus 233 ----~~~~~~~NvpL~~g~~d~~y~~~~~~~l~~~~~~f~PdlIvvsaG~D~~~~Dplg~l~lt~~ 294 (295)
.++++++|||||+|++|++|+.+|+++| +++++|+||+||||||||+|++||||+|+||++
T Consensus 253 ~G~g~g~g~~vNvPL~~g~~d~~yl~~~~~~l-~~l~~f~PdlIvvsaG~Da~~~Dplg~l~lt~~ 317 (362)
T 3men_A 253 RGAGEGLGYNVNLPMPHGSSEAAFFERVDDAL-RELRRFAPDALVLSLGFDVYRDDPQSQVAVTTD 317 (362)
T ss_dssp CCSGGGTTSEEEEEECTTBCHHHHHHHHHHHH-HHHHHHCCSEEEEEECSTTBTTCTTCCBCBCHH
T ss_pred ccCCCCCceeEeeccCCCCChHHHHHHHHHHH-HHHHhcCCCEEEEECcccCcCCCCCCCccCCHH
Confidence 2357899999999999999999999986 567999999999999999999999999999974
No 9
>2vqm_A HD4, histone deacetylase 4; inhibitor, repressor, chromatin, coiled coil, transcription regulation, UBL conjugation, chromatin regulator; HET: HA3; 1.8A {Homo sapiens} PDB: 2vqj_A* 2vqw_G 2vqq_A* 2vqo_A* 2vqv_A* 3c10_A* 3c0z_A 3c0y_A*
Probab=100.00 E-value=2.4e-72 Score=541.04 Aligned_cols=265 Identities=22% Similarity=0.317 Sum_probs=228.0
Q ss_pred ccCCCceeEEECcccCcccCCCC--CCCCCCChHHHHHHHHHHHCCCCCCCeeeCCCCCCHHHHhccCCHHHHHHHhcCC
Q 022526 29 DIPIFKLPLIYSPDYDISFLGIE--KLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSP 106 (295)
Q Consensus 29 ~~~~~~~~vvy~~~~~~h~~~~~--~~Hpe~p~R~~~i~~~L~~~gl~~~~~~i~p~~as~eel~~vHs~~YI~~l~~~~ 106 (295)
..|.|+|++|||++|..|.++++ ..|||+|+|++.|+++|++.||++.+++++|++|+.++|++||+++||+.++...
T Consensus 4 ~~p~~~Tg~vyd~~~l~H~~~~g~~~~HPE~P~Rl~~i~~~L~~~gl~~~~~~~~p~~At~eeL~~vHs~~Yv~~~~~~~ 83 (413)
T 2vqm_A 4 TKPRFTTGLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNP 83 (413)
T ss_dssp --CCSSEEEECCGGGCSCCCTTC-------CCCHHHHHHHHHHHHTHHHHSEEECCCCCCHHHHTTTSCHHHHHHHHSCG
T ss_pred CCCCCeEEEEEcHHHhccCCCCCCCCCCCCCHHHHHHHHHHHHhCCCCcCCeEeCCCCCCHHHHHHhCCHHHHHHHhcCc
Confidence 56889999999999999987643 5699999999999999999999999999999999999999999999999887654
Q ss_pred Cccccc----------------cCCCccccCCccccc-cchhhhHhhhcHHHHHHHHHhh----cCceeeccCCCCCCCc
Q 022526 107 NVSIII----------------EVPPVALFPNCLVQR-KVLYPFRKQVGGTILAAKLAKE----RGWAINVGGGFHHCSA 165 (295)
Q Consensus 107 ~~~~~~----------------e~~~~~~~~d~~~~~-~~~~~a~~~ag~~l~a~~~~~~----~~~a~~~~~G~HHA~~ 165 (295)
...... ..+...++.|++++. .+++++++++|+++.|++.++. ++||++|||| |||.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~dt~~~~~~s~~aA~laaG~~l~a~~~v~~g~~~~afa~vrppG-HHA~~ 162 (413)
T 2vqm_A 84 LNRQKLDSKKLLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAARLAVGCVVELVFKVATGELKNGFAVVRPPG-HHAEE 162 (413)
T ss_dssp GGGCC----HHHHHHHHHEEECTTSCEEECTTSTHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSEEEECCCSCC-TTCBT
T ss_pred hhhhHhhhhhhccchhhhhhccccCCcCccCCccccchhHHHHHHHHHHHHHHHHHHHhcCCccceeeeccccc-ccCcC
Confidence 221100 012234456776654 6899999999999999999985 3589999987 99999
Q ss_pred cCCCcccccccHHHHHHHHHHhcCCCeEEEEecCCcCChhhhHhhhCCCCEEEEEeeCC---CCCCCCcc-------cCC
Q 022526 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNP---GIYPRDYE-------ARR 235 (295)
Q Consensus 166 ~~~~GFC~~NnvAiaa~~l~~~~~~~rv~IiD~D~HhGnGtq~if~~d~~Vl~~Sih~~---~~yP~~~~-------~~~ 235 (295)
++++|||+|||+||||++++++++++||+|||||||||||||+|||+|++|+|+|+|+. +|||+||. .+.
T Consensus 163 ~~a~GFC~~Nnvaiaa~~~~~~~~~~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~~~~~~f~pgtG~~~e~G~g~g~ 242 (413)
T 2vqm_A 163 STPMGFCYFNSVAVAAKLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGSGAPDEVGTGPGV 242 (413)
T ss_dssp TBCBTTBSSCHHHHHHHHHHHHSCCSCEEEEECSSSCCHHHHHHHTTCTTEEEEEEEECGGGCSTTCCCCTTCCCSGGGT
T ss_pred CCCCCccccchHHHHHHHHHHhcCCCeEEEEecccCCCccHHHHHhcCcccccccchhccCCCCCCCCCCHHHcCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999984 58999874 245
Q ss_pred ceeeeccCC----CCCChhHHHHHHHHHHHHHHhhcCCCEEEEecCCCCCCC--CCCCCceeeeC
Q 022526 236 FIDQKVEVV----SGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEG--DPLGMLKVKWG 294 (295)
Q Consensus 236 ~~~~NvpL~----~g~~d~~y~~~~~~~l~~~~~~f~PdlIvvsaG~D~~~~--Dplg~l~lt~~ 294 (295)
++|+|+||+ ++++|++|+.+|+++|.|++++|+||+||+|||||+|++ ||||+|+||++
T Consensus 243 g~~~n~pl~~g~~~~~~D~~y~~~~~~~v~p~~~~f~PdlivvsaG~Da~~~d~D~lg~~~lt~~ 307 (413)
T 2vqm_A 243 GFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAR 307 (413)
T ss_dssp TCEEEEEECSCSSSCCCHHHHHHHHHHTHHHHHHHHCCSEEEEEECCTTBSSCTTTTCCCCBCHH
T ss_pred ccccccccccccCCCCCHHHHHHHHHHHHHHHHHhcCCCEEEEeCChhhcCCCCCCCCCcccCHH
Confidence 789999986 568999999999999999999999999999999999998 66999999964
No 10
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=62.52 E-value=8.2 Score=34.17 Aligned_cols=33 Identities=18% Similarity=0.296 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCEEEEecCCCCCCC
Q 022526 251 EYLKKLDEALEVAGHTFDPELVIYNAGTDILEG 283 (295)
Q Consensus 251 ~y~~~~~~~l~~~~~~f~PdlIvvsaG~D~~~~ 283 (295)
.+...+.+.|..++++++||+||.-.|.|.|-+
T Consensus 131 ~~~~~l~~~l~~~ir~~~PdvV~t~~~~d~HpD 163 (273)
T 3dff_A 131 DLVGEVADDIRSIIDEFDPTLVVTCAAIGEHPD 163 (273)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEEECCTTCCHH
T ss_pred chHHHHHHHHHHHHHHcCCCEEEECCCCCCChH
Confidence 355666677788899999999999999888743
No 11
>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {Actinoplanes teichomyceticus}
Probab=61.29 E-value=9.3 Score=33.69 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=27.1
Q ss_pred hHHHHHHHHHHHHHHhhcCCCEEEEecCCCCCCC
Q 022526 250 NEYLKKLDEALEVAGHTFDPELVIYNAGTDILEG 283 (295)
Q Consensus 250 ~~y~~~~~~~l~~~~~~f~PdlIvvsaG~D~~~~ 283 (295)
..+...+.+.|..++++++||+|+.-.|.|.|-+
T Consensus 127 ~~~~~~~~~~l~~~ir~~~PdvV~t~~~~d~HpD 160 (270)
T 3dfi_A 127 HDLVAAIREDIESMIAECDPTLVLTCVAIGKHPD 160 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSEEEEECCTTCCHH
T ss_pred cchHHHHHHHHHHHHHHcCCCEEEeCCCCCCChh
Confidence 3455666677788899999999999999888743
No 12
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=55.81 E-value=49 Score=26.46 Aligned_cols=10 Identities=20% Similarity=0.514 Sum_probs=8.9
Q ss_pred CeEEEEecCC
Q 022526 191 SRVMIIDLDA 200 (295)
Q Consensus 191 ~rv~IiD~D~ 200 (295)
+||++||+|-
T Consensus 31 ~~vlliD~D~ 40 (206)
T 4dzz_A 31 YNIAVVDTDP 40 (206)
T ss_dssp CCEEEEECCT
T ss_pred CeEEEEECCC
Confidence 6999999993
No 13
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=43.14 E-value=16 Score=30.43 Aligned_cols=18 Identities=11% Similarity=0.172 Sum_probs=13.4
Q ss_pred HHhcCCCeEEEEecCCcCCh
Q 022526 185 FVQLNISRVMIIDLDAHQGN 204 (295)
Q Consensus 185 ~~~~~~~rv~IiD~D~HhGn 204 (295)
..+.| +||++||+|.. |+
T Consensus 24 la~~g-~~VlliD~D~~-~~ 41 (254)
T 3kjh_A 24 MASDY-DKIYAVDGDPD-SC 41 (254)
T ss_dssp HTTTC-SCEEEEEECTT-SC
T ss_pred HHHCC-CeEEEEeCCCC-cC
Confidence 33445 79999999995 55
No 14
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=41.34 E-value=22 Score=29.45 Aligned_cols=15 Identities=27% Similarity=0.299 Sum_probs=12.8
Q ss_pred CeEEEEecCCcCChh
Q 022526 191 SRVMIIDLDAHQGNG 205 (295)
Q Consensus 191 ~rv~IiD~D~HhGnG 205 (295)
+||++||+|..+|+=
T Consensus 32 ~~VlliD~D~~~~~l 46 (237)
T 1g3q_A 32 RKVLAVDGDLTMANL 46 (237)
T ss_dssp CCEEEEECCTTSCCH
T ss_pred CeEEEEeCCCCCCCh
Confidence 699999999987753
No 15
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=41.25 E-value=26 Score=29.77 Aligned_cols=20 Identities=10% Similarity=0.303 Sum_probs=15.1
Q ss_pred CeEEEEecCCcCChhhhHhhh
Q 022526 191 SRVMIIDLDAHQGNGHEKDFS 211 (295)
Q Consensus 191 ~rv~IiD~D~HhGnGtq~if~ 211 (295)
.||++||+|. +|+.+...+.
T Consensus 30 ~~VlliD~D~-q~~~~~~~~~ 49 (269)
T 1cp2_A 30 KTIMVVGCDP-KADSTRLLLG 49 (269)
T ss_dssp CCEEEEEECT-TSCSSHHHHT
T ss_pred CcEEEEcCCC-CCCHHHHhcC
Confidence 5999999996 4666666554
No 16
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=41.09 E-value=23 Score=32.23 Aligned_cols=19 Identities=26% Similarity=0.412 Sum_probs=15.7
Q ss_pred CeEEEEecCCcCChhhhHhh
Q 022526 191 SRVMIIDLDAHQGNGHEKDF 210 (295)
Q Consensus 191 ~rv~IiD~D~HhGnGtq~if 210 (295)
+||++||+|.. ||.+..++
T Consensus 31 ~rVLlID~D~q-~~~~~~l~ 49 (361)
T 3pg5_A 31 KRVLYVDCDPQ-CNATQLML 49 (361)
T ss_dssp CCEEEEECCTT-CTTHHHHS
T ss_pred CcEEEEEcCCC-CChhhhhc
Confidence 69999999987 77777665
No 17
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=40.43 E-value=24 Score=29.94 Aligned_cols=15 Identities=33% Similarity=0.344 Sum_probs=12.9
Q ss_pred CeEEEEecCCcCChh
Q 022526 191 SRVMIIDLDAHQGNG 205 (295)
Q Consensus 191 ~rv~IiD~D~HhGnG 205 (295)
+||++||+|...||=
T Consensus 32 ~~VlliD~D~~~~~l 46 (263)
T 1hyq_A 32 HDVTIVDADITMANL 46 (263)
T ss_dssp CCEEEEECCCSSSSH
T ss_pred CcEEEEECCCCCCCc
Confidence 699999999987763
No 18
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=40.23 E-value=24 Score=29.71 Aligned_cols=17 Identities=18% Similarity=0.200 Sum_probs=13.7
Q ss_pred CeEEEEecCCcCChhhh
Q 022526 191 SRVMIIDLDAHQGNGHE 207 (295)
Q Consensus 191 ~rv~IiD~D~HhGnGtq 207 (295)
+||++||+|..+||=+.
T Consensus 32 ~~VlliD~D~~~~~~~~ 48 (260)
T 3q9l_A 32 KKTVVIDFAIGLRNLDL 48 (260)
T ss_dssp CCEEEEECCCSSCCHHH
T ss_pred CcEEEEECCCCCCChhH
Confidence 59999999998776443
No 19
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=37.09 E-value=34 Score=28.40 Aligned_cols=19 Identities=16% Similarity=0.127 Sum_probs=15.1
Q ss_pred CeEEEEecCCcCChhhhHh
Q 022526 191 SRVMIIDLDAHQGNGHEKD 209 (295)
Q Consensus 191 ~rv~IiD~D~HhGnGtq~i 209 (295)
+||++||+|...|+=+..+
T Consensus 35 ~~VlliD~D~~~~~l~~~~ 53 (245)
T 3ea0_A 35 IHVLAVDISLPFGDLDMYL 53 (245)
T ss_dssp CCEEEEECCTTTCCGGGGT
T ss_pred CCEEEEECCCCCCCHHHHh
Confidence 6999999999877755443
No 20
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=36.66 E-value=33 Score=29.16 Aligned_cols=15 Identities=53% Similarity=0.975 Sum_probs=12.3
Q ss_pred CeEEEEecCCcCChhh
Q 022526 191 SRVMIIDLDAHQGNGH 206 (295)
Q Consensus 191 ~rv~IiD~D~HhGnGt 206 (295)
+||++||+|. +|+-+
T Consensus 36 ~~VlliD~D~-~~~~~ 50 (257)
T 1wcv_1 36 KRVLLVDLDP-QGNAT 50 (257)
T ss_dssp CCEEEEECCT-TCHHH
T ss_pred CCEEEEECCC-CcCHH
Confidence 6999999998 47654
No 21
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=36.10 E-value=34 Score=29.57 Aligned_cols=20 Identities=20% Similarity=0.350 Sum_probs=14.9
Q ss_pred CeEEEEecCCcCChhhhHhhh
Q 022526 191 SRVMIIDLDAHQGNGHEKDFS 211 (295)
Q Consensus 191 ~rv~IiD~D~HhGnGtq~if~ 211 (295)
.||++||+|.. ++.+..++.
T Consensus 31 ~rVlliD~D~q-~~~~~~~~~ 50 (289)
T 2afh_E 31 KKVMIVGCDPK-ADSTRLILH 50 (289)
T ss_dssp CCEEEEEECSS-SCSSHHHHC
T ss_pred CeEEEEecCCC-CCHHHHhcC
Confidence 69999999975 556665553
No 22
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=34.38 E-value=38 Score=29.39 Aligned_cols=17 Identities=35% Similarity=0.561 Sum_probs=14.0
Q ss_pred CeEEEEecCCcCChhhh
Q 022526 191 SRVMIIDLDAHQGNGHE 207 (295)
Q Consensus 191 ~rv~IiD~D~HhGnGtq 207 (295)
+||++||+|..+|+-+.
T Consensus 34 ~~VlliD~D~~q~~l~~ 50 (286)
T 2xj4_A 34 AKVAVIDLDLRQRTSAR 50 (286)
T ss_dssp CCEEEEECCTTTCHHHH
T ss_pred CcEEEEECCCCCCCHHH
Confidence 59999999997776554
No 23
>3hsy_A Glutamate receptor 2; ligand-gated ION channel, synapse, cell CELL membrane, endoplasmic reticulum, glycoprotein, ION TRA ionic channel; HET: NAG BMA; 1.75A {Rattus norvegicus} PDB: 3h5v_A* 3h5w_A 3o2j_A* 2wjw_A* 2wjx_A 3n6v_A
Probab=31.39 E-value=92 Score=27.68 Aligned_cols=34 Identities=6% Similarity=0.030 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhcCCCeEEEEecCCcCChhhhHhhh
Q 022526 177 ISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211 (295)
Q Consensus 177 vAiaa~~l~~~~~~~rv~IiD~D~HhGnGtq~if~ 211 (295)
.+-++..+.++.|.+||+||- |--.|.+..+.|.
T Consensus 108 ~~~a~~~~~~~~gw~~vaii~-d~~~g~~~~~~~~ 141 (376)
T 3hsy_A 108 LKGALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVL 141 (376)
T ss_dssp CHHHHHHHHHHTTCCEEEEEE-CSTTCSHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEEE-eCchhHHHHHHHH
Confidence 334443344678899999999 8888988777664
No 24
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=31.32 E-value=37 Score=29.92 Aligned_cols=14 Identities=43% Similarity=0.769 Sum_probs=12.2
Q ss_pred CeEEEEecCCcCCh
Q 022526 191 SRVMIIDLDAHQGN 204 (295)
Q Consensus 191 ~rv~IiD~D~HhGn 204 (295)
+||++||+|...++
T Consensus 122 ~rVLLID~D~~~~~ 135 (286)
T 3la6_A 122 KRVLLIDCDMRKGY 135 (286)
T ss_dssp CCEEEEECCTTTCC
T ss_pred CCEEEEeccCCCCC
Confidence 69999999998764
No 25
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=29.89 E-value=45 Score=29.08 Aligned_cols=17 Identities=24% Similarity=0.302 Sum_probs=13.1
Q ss_pred CeEEEEecCCcCChhhhH
Q 022526 191 SRVMIIDLDAHQGNGHEK 208 (295)
Q Consensus 191 ~rv~IiD~D~HhGnGtq~ 208 (295)
+||++||+|. +||-+..
T Consensus 70 ~~VlliD~D~-~~~~~~~ 86 (307)
T 3end_A 70 KRVLQIGCDP-KHDSTFT 86 (307)
T ss_dssp CCEEEEEESS-SCCTTHH
T ss_pred CeEEEEeCCC-CCCHHHH
Confidence 5999999998 5665543
No 26
>2oze_A ORF delta'; para, walker type atpases, DNA segregation, PSM19035, plasmid, DNA binding protein; HET: AGS EPE; 1.83A {Streptococcus pyogenes}
Probab=29.27 E-value=47 Score=28.69 Aligned_cols=17 Identities=24% Similarity=0.366 Sum_probs=13.1
Q ss_pred CeEEEEecCCcCChhhhH
Q 022526 191 SRVMIIDLDAHQGNGHEK 208 (295)
Q Consensus 191 ~rv~IiD~D~HhGnGtq~ 208 (295)
+||++||+|.. |+.|..
T Consensus 66 ~rVlliD~D~q-~~~~~~ 82 (298)
T 2oze_A 66 LKVLMIDKDLQ-ATLTKD 82 (298)
T ss_dssp CCEEEEEECTT-CHHHHH
T ss_pred CeEEEEeCCCC-CCHHHH
Confidence 69999999996 555543
No 27
>4gpa_A Glutamate receptor 4; PBP fold, ligand-gated ION channel, ION transport, transmembrane AMPA receptor regulating proteins, cornichons, ckamp44; HET: NAG; 2.25A {Rattus norvegicus}
Probab=28.48 E-value=1.4e+02 Score=25.97 Aligned_cols=31 Identities=0% Similarity=-0.169 Sum_probs=23.5
Q ss_pred HHHHHHHhcCCCeEEEEecCCcCChhhhHhh
Q 022526 180 CIHYAFVQLNISRVMIIDLDAHQGNGHEKDF 210 (295)
Q Consensus 180 aa~~l~~~~~~~rv~IiD~D~HhGnGtq~if 210 (295)
|+..+.+..+.++|+||--|--.+.|.++++
T Consensus 120 a~~~l~~~~~w~~vaii~~~d~~~~~~~~~~ 150 (389)
T 4gpa_A 120 ALLSLLDHYEWNCFVFLYDTDRGYSILQAIM 150 (389)
T ss_dssp HHHHHHHHTTCCEEEEEECSTTCSHHHHHHH
T ss_pred HHHHHHHHcCCcEEEEEEecchhhHHHHHHH
Confidence 4444677889999999976777788887765
No 28
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=28.31 E-value=48 Score=28.80 Aligned_cols=14 Identities=21% Similarity=0.382 Sum_probs=12.2
Q ss_pred CeEEEEecCCcCCh
Q 022526 191 SRVMIIDLDAHQGN 204 (295)
Q Consensus 191 ~rv~IiD~D~HhGn 204 (295)
+||++||+|...++
T Consensus 112 ~rVLLID~D~~~~~ 125 (271)
T 3bfv_A 112 YKTLIVDGDMRKPT 125 (271)
T ss_dssp CCEEEEECCSSSCC
T ss_pred CeEEEEeCCCCCcc
Confidence 69999999998764
No 29
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=27.69 E-value=51 Score=28.04 Aligned_cols=15 Identities=27% Similarity=0.164 Sum_probs=12.4
Q ss_pred CeEEEEecCCcCChh
Q 022526 191 SRVMIIDLDAHQGNG 205 (295)
Q Consensus 191 ~rv~IiD~D~HhGnG 205 (295)
+||++||+|...++=
T Consensus 48 ~~VlliD~D~~~~~l 62 (262)
T 2ph1_A 48 KKVGILDADFLGPSI 62 (262)
T ss_dssp CCEEEEECCSSCCHH
T ss_pred CeEEEEeCCCCCCCH
Confidence 599999999976553
No 30
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=27.64 E-value=48 Score=28.12 Aligned_cols=18 Identities=22% Similarity=0.386 Sum_probs=13.3
Q ss_pred CeEEEEecCCcCChhhhHh
Q 022526 191 SRVMIIDLDAHQGNGHEKD 209 (295)
Q Consensus 191 ~rv~IiD~D~HhGnGtq~i 209 (295)
+||++||+|.. |+.+..+
T Consensus 56 ~~VlliD~D~~-~~~~~~~ 73 (267)
T 3k9g_A 56 NKVLLIDMDTQ-ASITSYF 73 (267)
T ss_dssp SCEEEEEECTT-CHHHHHT
T ss_pred CCEEEEECCCC-CCHHHHh
Confidence 79999999985 4544443
No 31
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=27.63 E-value=48 Score=29.25 Aligned_cols=15 Identities=33% Similarity=0.640 Sum_probs=12.8
Q ss_pred CeEEEEecCCcCChh
Q 022526 191 SRVMIIDLDAHQGNG 205 (295)
Q Consensus 191 ~rv~IiD~D~HhGnG 205 (295)
+||++||+|...++=
T Consensus 134 ~rVLLID~D~r~~~l 148 (299)
T 3cio_A 134 QKVLFIDADLRRGYS 148 (299)
T ss_dssp CCEEEEECCTTTCCH
T ss_pred CcEEEEECCCCCccH
Confidence 699999999987654
No 32
>3cwq_A Para family chromosome partitioning protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: ADP; 2.47A {Synechocystis SP}
Probab=26.17 E-value=56 Score=26.89 Aligned_cols=21 Identities=14% Similarity=0.207 Sum_probs=14.6
Q ss_pred HHHhcCCCeEEEEecCCcCChhhh
Q 022526 184 AFVQLNISRVMIIDLDAHQGNGHE 207 (295)
Q Consensus 184 l~~~~~~~rv~IiD~D~HhGnGtq 207 (295)
++.+.| ||++||+|.. |+.+.
T Consensus 24 ~la~~g--~VlliD~D~q-~~~~~ 44 (209)
T 3cwq_A 24 YLALQG--ETLLIDGDPN-RSATG 44 (209)
T ss_dssp HHHTTS--CEEEEEECTT-CHHHH
T ss_pred HHHhcC--CEEEEECCCC-CCHHH
Confidence 334456 9999999985 55553
No 33
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=25.27 E-value=47 Score=30.17 Aligned_cols=18 Identities=17% Similarity=0.495 Sum_probs=12.9
Q ss_pred CeEEEEecCCcCChhhhHhh
Q 022526 191 SRVMIIDLDAHQGNGHEKDF 210 (295)
Q Consensus 191 ~rv~IiD~D~HhGnGtq~if 210 (295)
+||++||+| .+|| +...|
T Consensus 173 ~rVlliD~D-~~~~-l~~~l 190 (373)
T 3fkq_A 173 KKVFYLNIE-QCGT-TDVFF 190 (373)
T ss_dssp CCEEEEECC-TTCC-HHHHC
T ss_pred CCEEEEECC-CCCC-HHHHc
Confidence 699999999 6663 33444
No 34
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=24.71 E-value=52 Score=27.89 Aligned_cols=25 Identities=20% Similarity=0.122 Sum_probs=19.1
Q ss_pred HHHHHHHhhcCCCEEEEecCCCCCC
Q 022526 258 EALEVAGHTFDPELVIYNAGTDILE 282 (295)
Q Consensus 258 ~~l~~~~~~f~PdlIvvsaG~D~~~ 282 (295)
+.|..++++++||+|+.-.+.|.|-
T Consensus 85 ~~l~~~ir~~~P~~V~t~~~~d~H~ 109 (227)
T 1uan_A 85 LKLAQALRRLRPRVVFAPLEADRHP 109 (227)
T ss_dssp HHHHHHHHHHCEEEEEEECSCCSSH
T ss_pred HHHHHHHHHhCCCEEEeCCCCCCCh
Confidence 4555677999999999877777663
No 35
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=24.63 E-value=67 Score=27.62 Aligned_cols=24 Identities=21% Similarity=0.170 Sum_probs=18.4
Q ss_pred HHHHHHHhhcCCCEEEEecCCCCC
Q 022526 258 EALEVAGHTFDPELVIYNAGTDIL 281 (295)
Q Consensus 258 ~~l~~~~~~f~PdlIvvsaG~D~~ 281 (295)
+.|..++++++||+|+.-.+.|.|
T Consensus 87 ~~l~~~ir~~~PdvV~t~~~~d~H 110 (242)
T 2ixd_A 87 REIVKVIRTYKPKLVFAPYYEDRH 110 (242)
T ss_dssp HHHHHHHHHHCCSEEEEECSCSSS
T ss_pred HHHHHHHHHcCCCEEEECCCCCCC
Confidence 455567789999999987776765
No 36
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=24.20 E-value=92 Score=25.40 Aligned_cols=36 Identities=17% Similarity=0.206 Sum_probs=26.0
Q ss_pred CCCCCChhHHHHHHHHHHHHHHhhcCCCEEEEecCC
Q 022526 243 VVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGT 278 (295)
Q Consensus 243 L~~g~~d~~y~~~~~~~l~~~~~~f~PdlIvvsaG~ 278 (295)
.+++.+..+=+..+.+-|..++++|+||.+.+-.=|
T Consensus 38 t~~~~~~~~RL~~I~~~l~~~i~~~~Pd~vaiE~~F 73 (166)
T 4ep4_A 38 TSPQEPAKERVGRIHARVLEVLHRFRPEAVAVEEQF 73 (166)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHHHHCCSEEEEECCC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHhCCCEEEEeehh
Confidence 344455666666666778888999999999875433
No 37
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=23.45 E-value=88 Score=24.84 Aligned_cols=29 Identities=10% Similarity=0.186 Sum_probs=15.2
Q ss_pred CCChhHHHHHHHHHHHHHHhhcCCCEEEEecCC
Q 022526 246 GTTTNEYLKKLDEALEVAGHTFDPELVIYNAGT 278 (295)
Q Consensus 246 g~~d~~y~~~~~~~l~~~~~~f~PdlIvvsaG~ 278 (295)
+++...+++.+++ .+...+||+|++..|.
T Consensus 56 ~~~~~~~~~~~~~----~~~~~~pd~Vvi~~G~ 84 (200)
T 4h08_A 56 SVGDPALIEELAV----VLKNTKFDVIHFNNGL 84 (200)
T ss_dssp CTTCHHHHHHHHH----HHHHSCCSEEEECCCS
T ss_pred CccHHHHHHHHHH----HHhcCCCCeEEEEeee
Confidence 3444444444433 2344567777776665
No 38
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=22.15 E-value=1.4e+02 Score=26.79 Aligned_cols=21 Identities=19% Similarity=0.325 Sum_probs=16.2
Q ss_pred CeEEEEecCCcCChhhhHhhhCC
Q 022526 191 SRVMIIDLDAHQGNGHEKDFSSD 213 (295)
Q Consensus 191 ~rv~IiD~D~HhGnGtq~if~~d 213 (295)
+||++||+|.- + +....|..+
T Consensus 55 ~rVLlvD~D~~-~-~l~~~l~~~ 75 (349)
T 3ug7_A 55 LKVVIVSTDPA-H-SLRDIFEQE 75 (349)
T ss_dssp CCEEEEECCTT-C-HHHHHHCSC
T ss_pred CeEEEEeCCCC-C-CHHHHhCCC
Confidence 69999999993 3 777777544
No 39
>1q74_A 1D-MYO-inosityl 2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase (MSHB); rossmann fold, zinc aminohydrolase; HET: PE4; 1.70A {Mycobacterium tuberculosis} SCOP: c.134.1.1 PDB: 1q7t_A*
Probab=21.63 E-value=72 Score=28.35 Aligned_cols=27 Identities=19% Similarity=0.095 Sum_probs=18.4
Q ss_pred HHHHHHHHHHhhcCCCEEEE--ecCCCCC
Q 022526 255 KLDEALEVAGHTFDPELVIY--NAGTDIL 281 (295)
Q Consensus 255 ~~~~~l~~~~~~f~PdlIvv--saG~D~~ 281 (295)
.+.+.|..++++++|++|+. ..|.|.|
T Consensus 116 ~~~~~l~~~ir~~rP~vV~t~~p~g~~~H 144 (303)
T 1q74_A 116 QTVGALVAIIRELRPHVVVTYDPNGGYGH 144 (303)
T ss_dssp HHHHHHHHHHHHHCCSEEEEECTTTTTCC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCCCC
Confidence 34455666789999999886 3455655
No 40
>2h4a_A YRAM (HI1655); perplasmic binding protein, lipoprotein; 1.35A {Haemophilus influenzae} PDB: 3ckm_A
Probab=21.44 E-value=35 Score=30.52 Aligned_cols=41 Identities=5% Similarity=0.097 Sum_probs=33.8
Q ss_pred ccccccHHHHHHHHHHhcCCCeEEEEecCCcCChhhhHhhhC
Q 022526 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212 (295)
Q Consensus 171 FC~~NnvAiaa~~l~~~~~~~rv~IiD~D~HhGnGtq~if~~ 212 (295)
++.-+.+..+++|+.++ |.+||+||.-|-=.|.|..+.|.+
T Consensus 104 ~~~~~~~~~~a~~a~~~-g~k~vail~~~~~yG~~~~~~F~~ 144 (325)
T 2h4a_A 104 LSPEDEAESAANKMWND-GVRNPLVAMPQNDLGQRVGNAFNV 144 (325)
T ss_dssp CCHHHHHHHHHHHHHHT-TCCSCEEEEESSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHc-CCCeEEEEEcCCcHHHHHHHHHHH
Confidence 44555678888998875 899999999999999999998853
No 41
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=21.09 E-value=74 Score=28.23 Aligned_cols=20 Identities=10% Similarity=0.285 Sum_probs=14.8
Q ss_pred CeEEEEecCCcCChhhhHhhhC
Q 022526 191 SRVMIIDLDAHQGNGHEKDFSS 212 (295)
Q Consensus 191 ~rv~IiD~D~HhGnGtq~if~~ 212 (295)
+||++||+|. .+ .....|..
T Consensus 43 ~rVLlvD~D~-~~-~l~~~l~~ 62 (324)
T 3zq6_A 43 KKTLVISTDP-AH-SLSDSLER 62 (324)
T ss_dssp CCEEEEECCS-SC-CHHHHHTS
T ss_pred CcEEEEeCCC-Cc-CHHHHhCC
Confidence 6999999999 43 55566643
No 42
>3mnf_A PAC2 family protein; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.97A {Streptomyces avermitilis}
Probab=20.46 E-value=1.5e+02 Score=25.61 Aligned_cols=91 Identities=14% Similarity=0.057 Sum_probs=52.6
Q ss_pred HHHHHHHHHHhcCCCeEEEEecCCcCChhhhHhhhCCCCEEEEEeeCC---CCCCCCcc------cCCcee---eeccCC
Q 022526 177 ISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNP---GIYPRDYE------ARRFID---QKVEVV 244 (295)
Q Consensus 177 vAiaa~~l~~~~~~~rv~IiD~D~HhGnGtq~if~~d~~Vl~~Sih~~---~~yP~~~~------~~~~~~---~NvpL~ 244 (295)
..+|+.|+.++.+.++|+.||.|-..- |...|-+.++. +. -.||...- ...+.+ +.=+-|
T Consensus 22 g~~a~~hL~~~l~~~~va~id~d~~~d------y~~~rP~v~~~--~g~~~~~~p~~~~~~~~~~d~~~~~~lll~g~eP 93 (250)
T 3mnf_A 22 ASTAVAHLDREWKGEVFAALDAEDYYD------FQVNRPTVWLD--GGVRKITWPTTRLSVVRVGGEKPRDLVLVRGIEP 93 (250)
T ss_dssp HHHHHHHHHHHTTCEEEEECCGGGTCC------TTTSCCEEEEE--TTEEEEECCCEEEEEEEEESSSEEEEEEEEEECC
T ss_pred HHHHHHHHHHHcCCeEEEEEechhccc------cCCCCCEEEEe--CCEEEeecCCceEEEEecCCCCCCcEEEEECCCC
Confidence 357889999999999999999876532 22222233332 21 12442210 111111 122333
Q ss_pred CCCChhHHHHHHHHHHHHHHhhcCCCEEEEecCCCC
Q 022526 245 SGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDI 280 (295)
Q Consensus 245 ~g~~d~~y~~~~~~~l~~~~~~f~PdlIvvsaG~D~ 280 (295)
+ . .| +.|-+.+..++++|+.+.||.-.|+..
T Consensus 94 ~-~---~w-~~f~~~vl~~a~~~gv~~iv~lgg~~~ 124 (250)
T 3mnf_A 94 S-M---RW-RSFCNELLAFAHELGVELVVVLGALLG 124 (250)
T ss_dssp S-S---CH-HHHHHHHHHHHHHHTCCEEEEEEEEEE
T ss_pred c-h---HH-HHHHHHHHHHHHHcCCCEEEEEeCccC
Confidence 2 2 23 455556667789999999999999843
Done!