Your job contains 1 sequence.
>022527
MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGL
GLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN
KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA
LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS
RVEAIQKACMDSGVLNKRKSYIIQSELRYSSTMIVIFFIILAIIFSYLSSTRASK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022527
(295 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2139514 - symbol:SQS1 "squalene synthase 1" sp... 1132 8.2e-115 1
TAIR|locus:2139534 - symbol:SQS2 "squalene synthase 2" sp... 1040 4.6e-105 1
UNIPROTKB|F1NFJ9 - symbol:FDFT1 "Uncharacterized protein"... 667 1.5e-65 1
DICTYBASE|DDB_G0292072 - symbol:fdfT "farnesyl-diphosphat... 658 1.4e-64 1
MGI|MGI:102706 - symbol:Fdft1 "farnesyl diphosphate farne... 640 1.1e-62 1
RGD|61834 - symbol:Fdft1 "farnesyl diphosphate farnesyl t... 638 1.8e-62 1
ZFIN|ZDB-GENE-081104-242 - symbol:si:ch73-107c13.2 "si:ch... 625 4.3e-61 1
UNIPROTKB|E2R6N6 - symbol:FDFT1 "Uncharacterized protein"... 619 1.9e-60 1
UNIPROTKB|B3KQ95 - symbol:FDFT1 "Squalene synthase" speci... 619 1.9e-60 1
UNIPROTKB|B4DT56 - symbol:FDFT1 "cDNA FLJ50660, highly si... 619 1.9e-60 1
UNIPROTKB|B7Z1J3 - symbol:FDFT1 "Squalene synthase" speci... 619 1.9e-60 1
UNIPROTKB|E9PNM1 - symbol:FDFT1 "Squalene synthase" speci... 619 1.9e-60 1
UNIPROTKB|P37268 - symbol:FDFT1 "Squalene synthase" speci... 619 1.9e-60 1
UNIPROTKB|Q6IE76 - symbol:fdft1 "FDFT1 protein" species:9... 615 5.0e-60 1
UNIPROTKB|Q32KR6 - symbol:FDFT1 "Squalene synthase" speci... 614 6.4e-60 1
UNIPROTKB|I3LFX7 - symbol:FDFT1 "Uncharacterized protein"... 605 5.7e-59 1
POMBASE|SPBC646.05c - symbol:erg9 "squalene synthase Erg9... 537 9.2e-52 1
UNIPROTKB|B4DJE5 - symbol:FDFT1 "cDNA FLJ50548, highly si... 535 1.5e-51 1
CGD|CAL0000316 - symbol:ERG9 species:5476 "Candida albica... 518 9.5e-50 1
UNIPROTKB|Q59Y33 - symbol:ERG9 "Putative uncharacterized ... 518 9.5e-50 1
ASPGD|ASPL0000036668 - symbol:AN10396 species:162425 "Eme... 503 3.7e-48 1
SGD|S000001233 - symbol:ERG9 "Farnesyl-diphosphate farnes... 500 7.7e-48 1
UNIPROTKB|Q60AN4 - symbol:sqs "Squalene synthase" species... 154 1.2e-08 1
UNIPROTKB|E9PS69 - symbol:FDFT1 "Squalene synthase" speci... 99 0.00011 1
>TAIR|locus:2139514 [details] [associations]
symbol:SQS1 "squalene synthase 1" species:3702
"Arabidopsis thaliana" [GO:0004310 "farnesyl-diphosphate
farnesyltransferase activity" evidence=IEA;ISS;IDA] [GO:0008610
"lipid biosynthetic process" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016765 "transferase activity, transferring alkyl
or aryl (other than methyl) groups" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0006084 "acetyl-CoA metabolic process"
evidence=RCA] [GO:0006598 "polyamine catabolic process"
evidence=RCA] [GO:0009698 "phenylpropanoid metabolic process"
evidence=RCA] [GO:0016126 "sterol biosynthetic process"
evidence=RCA;TAS] [GO:0016132 "brassinosteroid biosynthetic
process" evidence=RCA] [GO:0042398 "cellular modified amino acid
biosynthetic process" evidence=RCA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=TAS] InterPro:IPR002060
InterPro:IPR006449 InterPro:IPR019845 Pfam:PF00494 PROSITE:PS01044
PROSITE:PS01045 GO:GO:0016021 GO:GO:0005886 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0005789 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016491 GO:GO:0016126
EMBL:AL161585 EMBL:AL023094 GO:GO:0008299 UniPathway:UPA00767
EMBL:D29017 EMBL:X86692 EMBL:AF004560 EMBL:U79159 EMBL:AY099868
EMBL:BT003419 IPI:IPI00526988 PIR:S54251 RefSeq:NP_195190.1
UniGene:At.20898 UniGene:At.67805 ProteinModelPortal:P53799
SMR:P53799 IntAct:P53799 STRING:P53799 PaxDb:P53799 PRIDE:P53799
EnsemblPlants:AT4G34640.1 GeneID:829616 KEGG:ath:AT4G34640
TAIR:At4g34640 eggNOG:COG1562 HOGENOM:HOG000186940
InParanoid:P53799 KO:K00801 OMA:ELEEYCW PhylomeDB:P53799
ProtClustDB:CLSN2685914 BioCyc:ARA:AT4G34640-MONOMER
BioCyc:MetaCyc:AT4G34640-MONOMER Genevestigator:P53799
GermOnline:AT4G34640 GO:GO:0004310 GO:GO:0051996 TIGRFAMs:TIGR01559
Uniprot:P53799
Length = 410
Score = 1132 (403.5 bits), Expect = 8.2e-115, P = 8.2e-115
Identities = 211/264 (79%), Positives = 241/264 (91%)
Query: 1 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGL 60
MDQFHHVS AFLEL KGYQ+AIE+IT+RMGAGMAKFIC+EVE++DDYDEYC+YVAGLVGL
Sbjct: 119 MDQFHHVSAAFLELEKGYQEAIEEITRRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGL 178
Query: 61 GLSKLFYASGTEDLAPD--SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 118
GLSKLF A+G+E L PD ++SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIW KY
Sbjct: 179 GLSKLFLAAGSEVLTPDWEAISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKY 238
Query: 119 VNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGT 178
+KLEDLKYEEN++K+VQCLN+MVTNALMH+EDCLKYM +LRD +IFRFCAIPQIMAIGT
Sbjct: 239 ADKLEDLKYEENTNKSVQCLNEMVTNALMHIEDCLKYMVSLRDPSIFRFCAIPQIMAIGT 298
Query: 179 LALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKT 238
LALCYNN +VFRGVVK+RRGLTAKVIDRT M DVY AFYDFS +LK K++KNDPNA+KT
Sbjct: 299 LALCYNNEQVFRGVVKLRRGLTAKVIDRTKTMADVYGAFYDFSCMLKTKVDKNDPNASKT 358
Query: 239 LSRVEAIQKACMDSGVLNKRKSYI 262
L+R+EA+QK C D+GVL RKSY+
Sbjct: 359 LNRLEAVQKLCRDAGVLQNRKSYV 382
>TAIR|locus:2139534 [details] [associations]
symbol:SQS2 "squalene synthase 2" species:3702
"Arabidopsis thaliana" [GO:0004310 "farnesyl-diphosphate
farnesyltransferase activity" evidence=IEA;IGI;ISS;IDA] [GO:0008610
"lipid biosynthetic process" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016126 "sterol biosynthetic process"
evidence=ISS] InterPro:IPR002060 InterPro:IPR006449 Pfam:PF00494
GO:GO:0016021 EMBL:CP002687 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016126 EMBL:AL161585 EMBL:AL023094 KO:K00801
ProtClustDB:CLSN2685914 GO:GO:0004310 TIGRFAMs:TIGR01559
HSSP:P37268 IPI:IPI00518901 PIR:E85408 PIR:T05285
RefSeq:NP_195191.2 UniGene:At.54604 ProteinModelPortal:O65688
SMR:O65688 STRING:O65688 PRIDE:O65688 EnsemblPlants:AT4G34650.1
GeneID:829617 KEGG:ath:AT4G34650 TAIR:At4g34650 InParanoid:O65688
OMA:SYVNDET PhylomeDB:O65688 ArrayExpress:O65688
Genevestigator:O65688 Uniprot:O65688
Length = 413
Score = 1040 (371.2 bits), Expect = 4.6e-105, P = 4.6e-105
Identities = 198/264 (75%), Positives = 228/264 (86%)
Query: 1 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGL 60
MDQFHHVS AFL+L KGYQ+AIEDITKRMGAGMAKFICKEVE+IDDYDEYC+Y AGLVGL
Sbjct: 119 MDQFHHVSAAFLKLEKGYQEAIEDITKRMGAGMAKFICKEVETIDDYDEYCHYAAGLVGL 178
Query: 61 GLSKLFYASGTEDLAPD--SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 118
GLSK+F AS E L PD +SNS GLFLQKTNII+DYLEDINE PK RMFWPREIW KY
Sbjct: 179 GLSKIFIASELEILTPDWKQISNSTGLFLQKTNIIKDYLEDINERPKSRMFWPREIWGKY 238
Query: 119 VNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGT 178
V+KLED K EE + KAVQCLN+MVTNAL HVEDCLK +++LRD AIF+ CAIPQI+AIGT
Sbjct: 239 VDKLEDFKNEEKATKAVQCLNEMVTNALNHVEDCLKSLASLRDPAIFQSCAIPQIVAIGT 298
Query: 179 LALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKT 238
LALCYNN++VFRGVV++RRGL AKVIDRT M DVY AFYDFS +L+ K++ NDPNA KT
Sbjct: 299 LALCYNNVQVFRGVVRLRRGLIAKVIDRTKTMDDVYGAFYDFSCMLQTKVDNNDPNAMKT 358
Query: 239 LSRVEAIQKACMDSGVLNKRKSYI 262
L+R+E I+K C ++G L+KRKSY+
Sbjct: 359 LNRLETIKKFCKENGGLHKRKSYV 382
>UNIPROTKB|F1NFJ9 [details] [associations]
symbol:FDFT1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004310 "farnesyl-diphosphate farnesyltransferase
activity" evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR002060 InterPro:IPR006449 InterPro:IPR019845
Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045 GO:GO:0005783
GO:GO:0016021 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0008610 GO:GO:0004310 TIGRFAMs:TIGR01559 OMA:ELRHAVC
GeneTree:ENSGT00390000016034 EMBL:AADN02018292 EMBL:AADN02018293
IPI:IPI00570752 Ensembl:ENSGALT00000026894 Uniprot:F1NFJ9
Length = 418
Score = 667 (239.9 bits), Expect = 1.5e-65, P = 1.5e-65
Identities = 134/264 (50%), Positives = 176/264 (66%)
Query: 1 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGL 60
++ F +S F L K YQD I DI +MG GMA+F+ K+V+S ++D YC+YVAGLVG+
Sbjct: 123 LEDFPTISMEFRNLAKVYQDVISDICHKMGVGMAEFLEKKVDSQSEWDRYCHYVAGLVGI 182
Query: 61 GLSKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSK 117
GLS+LF AS ED + D+ L+NSMGLFLQKTNIIRDYLED E R FWPRE+WS+
Sbjct: 183 GLSRLFSASELEDPIVGQDTELANSMGLFLQKTNIIRDYLEDQLE---GREFWPREVWSR 239
Query: 118 YVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIG 177
Y KL DL EN D AVQC+N+++TNAL HV D L Y+S L++ ++F FCAIPQ+MAI
Sbjct: 240 YTKKLSDLTKPENIDMAVQCMNELITNALRHVPDVLTYLSRLKNQSVFNFCAIPQVMAIA 299
Query: 178 TLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK 237
TLA CYNN +VFRGVVK+R+G ++ NM V Y + + KI DP++ K
Sbjct: 300 TLAACYNNKQVFRGVVKIRKGQAVTLMMDATNMQSVKAIMYQYVEEIYQKIPSTDPSSNK 359
Query: 238 TLSRVEAIQKACMDSGVLNKRKSY 261
T + +I+ + SG + R Y
Sbjct: 360 TQQIIASIRAMSLPSGPMASRHHY 383
>DICTYBASE|DDB_G0292072 [details] [associations]
symbol:fdfT "farnesyl-diphosphate
farnesyltransferase" species:44689 "Dictyostelium discoideum"
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA;ISS] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity"
evidence=IEA;ISS] [GO:0051996 "squalene synthase activity"
evidence=IEA] [GO:0006695 "cholesterol biosynthetic process"
evidence=IEA;ISS] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016126 "sterol biosynthetic process" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0008202 "steroid metabolic process" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0006629 "lipid metabolic
process" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR002060
InterPro:IPR006449 InterPro:IPR019845 Pfam:PF00494 PROSITE:PS01044
PROSITE:PS01045 dictyBase:DDB_G0292072 GO:GO:0016021
GenomeReviews:CM000155_GR GO:GO:0005789 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AAFI02000187 GO:GO:0016491
GO:GO:0006695 GO:GO:0008299 UniPathway:UPA00767 eggNOG:COG1562
KO:K00801 GO:GO:0004310 GO:GO:0051996 TIGRFAMs:TIGR01559
RefSeq:XP_629811.1 HSSP:P37268 ProteinModelPortal:Q54DR1
STRING:Q54DR1 EnsemblProtists:DDB0231376 GeneID:8628492
KEGG:ddi:DDB_G0292072 OMA:ELRHAVC ProtClustDB:CLSZ2429473
Uniprot:Q54DR1
Length = 416
Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
Identities = 129/256 (50%), Positives = 176/256 (68%)
Query: 1 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGL 60
++ F V FL LG GY I DIT+RM GM++F+ K V ++ ++D YC+YVAGLVG+
Sbjct: 122 VENFDKVVDVFLGLGDGYCTIIHDITRRMANGMSEFLQKSVVTLPEWDLYCHYVAGLVGI 181
Query: 61 GLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSK 117
GLSK+F+ASG E D SN MGLFLQKTNIIRDYLEDINE K R+FWPR++W++
Sbjct: 182 GLSKIFHASGLESEWFATADDESNQMGLFLQKTNIIRDYLEDINE--K-RIFWPRDVWAR 238
Query: 118 YVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIG 177
Y LE+ K + A+ CLND++TNAL H L YMS L++ + FCAIPQ+MAIG
Sbjct: 239 YTLHLENFKEAKYQIPALHCLNDLITNALSHALIALDYMSRLKNPQVINFCAIPQVMAIG 298
Query: 178 TLALCYNNIEVFRGVVKMRRGLTAKVID--RTNNMTDVYLAFYDFSNILKPKINKNDPNA 235
TL CYNN VF GVVK+R+G A ++D ++ +T Y F+ F+N ++ K+ NDP+A
Sbjct: 299 TLNACYNNYNVFTGVVKIRKGQRALIVDAIQSKGLTATYELFFKFANEMRHKVPPNDPSA 358
Query: 236 TKTLSRVEAIQKACMD 251
KT+ +E+I+K C++
Sbjct: 359 KKTIQHLESIEKLCIE 374
>MGI|MGI:102706 [details] [associations]
symbol:Fdft1 "farnesyl diphosphate farnesyl transferase 1"
species:10090 "Mus musculus" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004310 "farnesyl-diphosphate farnesyltransferase
activity" evidence=ISO] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0006695 "cholesterol biosynthetic process" evidence=ISO]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0008202 "steroid
metabolic process" evidence=IEA] [GO:0008203 "cholesterol metabolic
process" evidence=IEA] [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016126 "sterol biosynthetic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=IEA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0045338 "farnesyl
diphosphate metabolic process" evidence=ISO] [GO:0051996 "squalene
synthase activity" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] InterPro:IPR002060 InterPro:IPR006449
InterPro:IPR019845 Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045
MGI:MGI:102706 GO:GO:0016021 GO:GO:0005789 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016491 GO:GO:0006695
EMBL:CH466535 GO:GO:0045338 GO:GO:0008299 UniPathway:UPA00767
eggNOG:COG1562 HOGENOM:HOG000186940 KO:K00801 GO:GO:0004310
GO:GO:0051996 TIGRFAMs:TIGR01559 HOVERGEN:HBG002370
OrthoDB:EOG4QVCC2 OMA:ELRHAVC CTD:2222 EMBL:D29016 EMBL:AK076062
EMBL:AK146766 EMBL:AK158633 EMBL:AK168629 EMBL:AK169317
EMBL:BC054722 EMBL:BC138301 EMBL:BC138302 IPI:IPI00134836
PIR:S52075 RefSeq:NP_034321.2 UniGene:Mm.474432
ProteinModelPortal:P53798 SMR:P53798 STRING:P53798
PhosphoSite:P53798 PaxDb:P53798 PRIDE:P53798
Ensembl:ENSMUST00000054963 GeneID:14137 KEGG:mmu:14137
GeneTree:ENSGT00390000016034 InParanoid:Q8BPF5 ChEMBL:CHEMBL4778
NextBio:285250 Bgee:P53798 CleanEx:MM_FDFT1 Genevestigator:P53798
GermOnline:ENSMUSG00000021273 Uniprot:P53798
Length = 416
Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
Identities = 128/264 (48%), Positives = 173/264 (65%)
Query: 1 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGL 60
++ F +S F L + YQ I+DI RMG GMA+F+ K+V S D+D+YC+YVAGLVG+
Sbjct: 122 LEDFPTISLEFRNLAEKYQTVIDDICHRMGCGMAEFVDKDVTSKQDWDKYCHYVAGLVGI 181
Query: 61 GLSKLFYASGTED--LAPD-SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSK 117
GLS+LF AS ED + D +NSMGLFLQKTNIIRDYLED E R FWP+E+W +
Sbjct: 182 GLSRLFSASEFEDPIVGEDIECANSMGLFLQKTNIIRDYLEDQQE---GRKFWPQEVWGR 238
Query: 118 YVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIG 177
Y+ KLED EN D AVQCLN+++TN L H+ D L Y+S LR+ ++F FCAIPQ+MAI
Sbjct: 239 YIKKLEDFAKPENVDVAVQCLNELITNTLQHIPDVLTYLSRLRNQSVFNFCAIPQVMAIA 298
Query: 178 TLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK 237
TLA CYNN +VF+GVVK+R+G ++ NM V Y + + +I +DP+++K
Sbjct: 299 TLAACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYIEEIYHRIPNSDPSSSK 358
Query: 238 TLSRVEAIQKACMDSGVLNKRKSY 261
T + I+ + + L R Y
Sbjct: 359 TKQVISKIRTQNLPNCQLISRSHY 382
>RGD|61834 [details] [associations]
symbol:Fdft1 "farnesyl diphosphate farnesyl transferase 1"
species:10116 "Rattus norvegicus" [GO:0004310 "farnesyl-diphosphate
farnesyltransferase activity" evidence=IDA;IMP] [GO:0005783
"endoplasmic reticulum" evidence=ISO] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0006695 "cholesterol
biosynthetic process" evidence=IMP;TAS] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0045338 "farnesyl diphosphate metabolic process"
evidence=IMP] [GO:0051996 "squalene synthase activity" evidence=IEA]
InterPro:IPR002060 InterPro:IPR006449 InterPro:IPR019845
Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045 RGD:61834 GO:GO:0043231
GO:GO:0016021 GO:GO:0005789 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016491 GO:GO:0006695 GO:GO:0045338
GO:GO:0008299 UniPathway:UPA00767 eggNOG:COG1562
HOGENOM:HOG000186940 KO:K00801 GO:GO:0004310 GO:GO:0051996
TIGRFAMs:TIGR01559 HOVERGEN:HBG002370 OrthoDB:EOG4QVCC2 OMA:ELRHAVC
CTD:2222 GeneTree:ENSGT00390000016034 EMBL:M95591 EMBL:BC081810
IPI:IPI00210233 PIR:A45105 RefSeq:NP_062111.1 UniGene:Rn.154404
ProteinModelPortal:Q02769 SMR:Q02769 STRING:Q02769 PRIDE:Q02769
Ensembl:ENSRNOT00000032089 GeneID:29580 KEGG:rno:29580
UCSC:RGD:61834 InParanoid:Q02769 BindingDB:Q02769 ChEMBL:CHEMBL3815
NextBio:609686 Genevestigator:Q02769 GermOnline:ENSRNOG00000021314
Uniprot:Q02769
Length = 416
Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
Identities = 128/264 (48%), Positives = 173/264 (65%)
Query: 1 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGL 60
++ F +S F L + YQ I DI RMG GMA+F+ K+V S D+D+YC+YVAGLVG+
Sbjct: 122 LEDFPTISLEFRNLAEKYQTVIADICHRMGCGMAEFLNKDVTSKQDWDKYCHYVAGLVGI 181
Query: 61 GLSKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSK 117
GLS+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED E R FWP+E+W K
Sbjct: 182 GLSRLFSASEFEDPIVGEDTECANSMGLFLQKTNIIRDYLEDQQE---GRQFWPQEVWGK 238
Query: 118 YVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIG 177
YV KLED EN D AV+CLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI
Sbjct: 239 YVKKLEDFVKPENVDVAVKCLNELITNALQHIPDVITYLSRLRNQSVFNFCAIPQVMAIA 298
Query: 178 TLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK 237
TLA CYNN +VF+GVVK+R+G ++ NM V Y + + ++ +DP+A+K
Sbjct: 299 TLAACYNNHQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYIEEIYHRVPNSDPSASK 358
Query: 238 TLSRVEAIQKACMDSGVLNKRKSY 261
+ I+ + + L R Y
Sbjct: 359 AKQLISNIRTQSLPNCQLISRSHY 382
>ZFIN|ZDB-GENE-081104-242 [details] [associations]
symbol:si:ch73-107c13.2 "si:ch73-107c13.2"
species:7955 "Danio rerio" [GO:0016740 "transferase activity"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA] [GO:0016765 "transferase activity, transferring alkyl
or aryl (other than methyl) groups" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR002060
InterPro:IPR006449 InterPro:IPR019845 Pfam:PF00494 PROSITE:PS01044
PROSITE:PS01045 ZFIN:ZDB-GENE-081104-242 GO:GO:0016021
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0008610
HOGENOM:HOG000186940 KO:K00801 GO:GO:0004310 TIGRFAMs:TIGR01559
HOVERGEN:HBG002370 OrthoDB:EOG4QVCC2 OMA:ELRHAVC
GeneTree:ENSGT00390000016034 EMBL:CU207296 IPI:IPI00507562
RefSeq:NP_001189454.1 UniGene:Dr.20618 Ensembl:ENSDART00000084724
GeneID:571911 KEGG:dre:571911 NextBio:20890752 Uniprot:B8JKU0
Length = 418
Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
Identities = 127/276 (46%), Positives = 186/276 (67%)
Query: 1 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGL 60
++ F +S F LG+ Y++ I DI RMG GMA+F+ K+V S+ ++D+YC+YVAGLVG+
Sbjct: 122 LEDFPTISVEFRNLGQEYREVISDICHRMGVGMAEFLEKKVSSMKEWDKYCHYVAGLVGI 181
Query: 61 GLSKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSK 117
GLS+LF AS E+ + D+ L+NSMGLFLQKTNIIRDYLED + R FWP E WS+
Sbjct: 182 GLSRLFSASQLEEPEVGRDTELANSMGLFLQKTNIIRDYLEDQQQ---GRAFWPEEAWSQ 238
Query: 118 YVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIG 177
Y + LEDL ++ A+ CLN +VT+AL HV D + Y+S LR+ ++F FCAIPQ+MAI
Sbjct: 239 YASGLEDLAQPQHLSSALSCLNLLVTDALRHVPDVMLYLSRLRNQSVFNFCAIPQVMAIA 298
Query: 178 TLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK 237
TL+ CYNN +VF+GVVK+R+G ++ + NM+ VY +S+ + K++ +DP+ K
Sbjct: 299 TLSACYNNPQVFQGVVKIRKGQAVTLMMQATNMSAVYSIITQYSHEILQKVSISDPSREK 358
Query: 238 TLSRVEAIQKACMDSGVLNKRKSYIIQSELRYSSTM 273
TL + I++ + G ++ R + I S + S+ M
Sbjct: 359 TLQILSVIREKSVHEGCVSSRAHHHI-SPVCVSAAM 393
>UNIPROTKB|E2R6N6 [details] [associations]
symbol:FDFT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0008610 "lipid
biosynthetic process" evidence=IEA] [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity" evidence=IEA]
InterPro:IPR002060 InterPro:IPR006449 InterPro:IPR019845
Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045 GO:GO:0005783
GO:GO:0016021 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0008610 KO:K00801 GO:GO:0004310 TIGRFAMs:TIGR01559
OMA:ELRHAVC CTD:2222 GeneTree:ENSGT00390000016034 EMBL:AAEX03014318
RefSeq:XP_534557.2 Ensembl:ENSCAFT00000012705 GeneID:477362
KEGG:cfa:477362 NextBio:20852865 Uniprot:E2R6N6
Length = 417
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 125/264 (47%), Positives = 172/264 (65%)
Query: 1 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGL 60
++ F +S F L + YQ I DI ++MG GMA+F+ K V S ++D+YC+YVAGLVG+
Sbjct: 122 LEDFPTISLEFRNLAEKYQTVIVDICRKMGFGMAEFLDKHVTSEQEWDKYCHYVAGLVGI 181
Query: 61 GLSKLFYASGTED-LAPDSL--SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSK 117
GLS+LF AS ED L + + +NSMGLFLQKTNIIRDYLED E R FWP+E+WSK
Sbjct: 182 GLSRLFSASELEDPLVGEDIECANSMGLFLQKTNIIRDYLEDQRE---GREFWPQEVWSK 238
Query: 118 YVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIG 177
YV KL D +N D AVQCLN+++TNAL H+ + Y+S LR+ ++F FCAIPQ+MAI
Sbjct: 239 YVKKLGDFAKPQNIDSAVQCLNELITNALHHIPHVITYLSRLRNQSVFNFCAIPQVMAIA 298
Query: 178 TLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK 237
TLA CYNN +VF+G+VK+R+G ++ NM V Y + + +I +DP++ K
Sbjct: 299 TLAACYNNQQVFKGIVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPSSDPSSGK 358
Query: 238 TLSRVEAIQKACMDSGVLNKRKSY 261
T + I+ + + L R Y
Sbjct: 359 TRQIISTIRTQNLPNCQLISRSHY 382
>UNIPROTKB|B3KQ95 [details] [associations]
symbol:FDFT1 "Squalene synthase" species:9606 "Homo
sapiens" [GO:0008610 "lipid biosynthetic process" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0045338 "farnesyl diphosphate metabolic process"
evidence=IEA] InterPro:IPR002060 InterPro:IPR006449
InterPro:IPR019845 Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045
GO:GO:0016021 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0008610 GO:GO:0045338 GO:GO:0004310 TIGRFAMs:TIGR01559
HOVERGEN:HBG002370 UniGene:Hs.593928 HGNC:HGNC:3629 ChiTaRS:FDFT1
EMBL:AC069185 EMBL:AK057726 IPI:IPI00909973 SMR:B3KQ95
STRING:B3KQ95 Ensembl:ENST00000538689 Uniprot:B3KQ95
Length = 306
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 126/264 (47%), Positives = 172/264 (65%)
Query: 1 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGL 60
++ F +S F L + YQ I DI +RMG GMA+F+ K V S ++D+YC+YVAGLVG+
Sbjct: 11 LEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGI 70
Query: 61 GLSKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSK 117
GLS+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED R FWP+E+WS+
Sbjct: 71 GLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQG---GREFWPQEVWSR 127
Query: 118 YVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIG 177
YV KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI
Sbjct: 128 YVKKLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIA 187
Query: 178 TLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK 237
TLA CYNN +VF+G VK+R+G ++ NM V Y + + +I +DP+++K
Sbjct: 188 TLAACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSK 247
Query: 238 TLSRVEAIQKACMDSGVLNKRKSY 261
T + I+ + + L R Y
Sbjct: 248 TRQIISTIRTQNLPNCQLISRSHY 271
>UNIPROTKB|B4DT56 [details] [associations]
symbol:FDFT1 "cDNA FLJ50660, highly similar to Squalene
synthetase (EC 2.5.1.21)" species:9606 "Homo sapiens" [GO:0008610
"lipid biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0004310 "farnesyl-diphosphate
farnesyltransferase activity" evidence=IEA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IEA]
[GO:0045338 "farnesyl diphosphate metabolic process" evidence=IEA]
InterPro:IPR002060 InterPro:IPR006449 InterPro:IPR019845
Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045 GO:GO:0016021
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0008610
GO:GO:0045338 GO:GO:0004310 TIGRFAMs:TIGR01559 HOVERGEN:HBG002370
UniGene:Hs.593928 HGNC:HGNC:3629 ChiTaRS:FDFT1 EMBL:AC069185
EMBL:AK300059 EMBL:AK316534 IPI:IPI01012882 SMR:B4DT56
STRING:B4DT56 Ensembl:ENST00000525777 Ensembl:ENST00000528643
Uniprot:B4DT56
Length = 332
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 126/264 (47%), Positives = 172/264 (65%)
Query: 1 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGL 60
++ F +S F L + YQ I DI +RMG GMA+F+ K V S ++D+YC+YVAGLVG+
Sbjct: 37 LEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGI 96
Query: 61 GLSKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSK 117
GLS+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED R FWP+E+WS+
Sbjct: 97 GLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQG---GREFWPQEVWSR 153
Query: 118 YVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIG 177
YV KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI
Sbjct: 154 YVKKLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIA 213
Query: 178 TLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK 237
TLA CYNN +VF+G VK+R+G ++ NM V Y + + +I +DP+++K
Sbjct: 214 TLAACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSK 273
Query: 238 TLSRVEAIQKACMDSGVLNKRKSY 261
T + I+ + + L R Y
Sbjct: 274 TRQIISTIRTQNLPNCQLISRSHY 297
>UNIPROTKB|B7Z1J3 [details] [associations]
symbol:FDFT1 "Squalene synthase" species:9606 "Homo
sapiens" [GO:0008610 "lipid biosynthetic process" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0045338 "farnesyl diphosphate metabolic process"
evidence=IEA] InterPro:IPR002060 InterPro:IPR006449
InterPro:IPR019845 Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045
GO:GO:0016021 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0008610 GO:GO:0045338 GO:GO:0004310 TIGRFAMs:TIGR01559
HOVERGEN:HBG002370 UniGene:Hs.593928 HGNC:HGNC:3629 ChiTaRS:FDFT1
EMBL:AC069185 EMBL:AK293545 EMBL:AK315993 EMBL:AK316351
EMBL:AK316531 IPI:IPI01022304 SMR:B7Z1J3 STRING:B7Z1J3
Ensembl:ENST00000528812 Ensembl:ENST00000530664 Uniprot:B7Z1J3
Length = 353
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 126/264 (47%), Positives = 172/264 (65%)
Query: 1 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGL 60
++ F +S F L + YQ I DI +RMG GMA+F+ K V S ++D+YC+YVAGLVG+
Sbjct: 58 LEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGI 117
Query: 61 GLSKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSK 117
GLS+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED R FWP+E+WS+
Sbjct: 118 GLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQG---GREFWPQEVWSR 174
Query: 118 YVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIG 177
YV KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI
Sbjct: 175 YVKKLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIA 234
Query: 178 TLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK 237
TLA CYNN +VF+G VK+R+G ++ NM V Y + + +I +DP+++K
Sbjct: 235 TLAACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSK 294
Query: 238 TLSRVEAIQKACMDSGVLNKRKSY 261
T + I+ + + L R Y
Sbjct: 295 TRQIISTIRTQNLPNCQLISRSHY 318
>UNIPROTKB|E9PNM1 [details] [associations]
symbol:FDFT1 "Squalene synthase" species:9606 "Homo
sapiens" [GO:0004310 "farnesyl-diphosphate farnesyltransferase
activity" evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR002060 InterPro:IPR006449 InterPro:IPR019845
Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045 GO:GO:0005783
GO:GO:0016021 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0008610 GO:GO:0004310 TIGRFAMs:TIGR01559 HGNC:HGNC:3629
ChiTaRS:FDFT1 EMBL:AC069185 IPI:IPI00976521
ProteinModelPortal:E9PNM1 SMR:E9PNM1 Ensembl:ENST00000525900
ArrayExpress:E9PNM1 Bgee:E9PNM1 Uniprot:E9PNM1
Length = 410
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 126/264 (47%), Positives = 172/264 (65%)
Query: 1 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGL 60
++ F +S F L + YQ I DI +RMG GMA+F+ K V S ++D+YC+YVAGLVG+
Sbjct: 115 LEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGI 174
Query: 61 GLSKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSK 117
GLS+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED R FWP+E+WS+
Sbjct: 175 GLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQG---GREFWPQEVWSR 231
Query: 118 YVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIG 177
YV KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI
Sbjct: 232 YVKKLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIA 291
Query: 178 TLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK 237
TLA CYNN +VF+G VK+R+G ++ NM V Y + + +I +DP+++K
Sbjct: 292 TLAACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSK 351
Query: 238 TLSRVEAIQKACMDSGVLNKRKSY 261
T + I+ + + L R Y
Sbjct: 352 TRQIISTIRTQNLPNCQLISRSHY 375
>UNIPROTKB|P37268 [details] [associations]
symbol:FDFT1 "Squalene synthase" species:9606 "Homo
sapiens" [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0051996
"squalene synthase activity" evidence=IEA] [GO:0045338 "farnesyl
diphosphate metabolic process" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=TAS] [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity" evidence=TAS]
[GO:0005789 "endoplasmic reticulum membrane" evidence=TAS]
[GO:0006695 "cholesterol biosynthetic process" evidence=TAS]
[GO:0044255 "cellular lipid metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0005783 "endoplasmic reticulum" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR002060 InterPro:IPR006449
InterPro:IPR019845 Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045
GO:GO:0016021 GO:GO:0005789 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016491 GO:GO:0044255 GO:GO:0006695
GO:GO:0045338 GO:GO:0008299 UniPathway:UPA00767 eggNOG:COG1562
KO:K00801 GO:GO:0004310 GO:GO:0051996 TIGRFAMs:TIGR01559
HOVERGEN:HBG002370 OrthoDB:EOG4QVCC2 OMA:ELRHAVC EMBL:L06070
EMBL:L06105 EMBL:X69141 EMBL:S76822 EMBL:BC003573 EMBL:BC009251
EMBL:BC029641 IPI:IPI00020944 PIR:A45998 PIR:I38245 PIR:I52090
RefSeq:NP_004453.3 UniGene:Hs.593928 PDB:1EZF PDB:3ASX PDB:3LEE
PDB:3Q2Z PDB:3Q30 PDB:3V66 PDB:3VJ8 PDB:3VJ9 PDB:3VJA PDB:3VJB
PDB:3VJC PDBsum:1EZF PDBsum:3ASX PDBsum:3LEE PDBsum:3Q2Z
PDBsum:3Q30 PDBsum:3V66 PDBsum:3VJ8 PDBsum:3VJ9 PDBsum:3VJA
PDBsum:3VJB PDBsum:3VJC ProteinModelPortal:P37268 SMR:P37268
IntAct:P37268 MINT:MINT-1401726 STRING:P37268 PhosphoSite:P37268
DMDM:585126 PaxDb:P37268 PeptideAtlas:P37268 PRIDE:P37268
DNASU:2222 Ensembl:ENST00000220584 GeneID:2222 KEGG:hsa:2222
UCSC:uc003wuh.3 CTD:2222 GeneCards:GC08P011653 H-InvDB:HIX0168873
HGNC:HGNC:3629 HPA:HPA008874 MIM:184420 neXtProt:NX_P37268
PharmGKB:PA28073 InParanoid:P37268 PhylomeDB:P37268
BioCyc:MetaCyc:HS01329-MONOMER SABIO-RK:P37268 BindingDB:P37268
ChEMBL:CHEMBL3338 ChiTaRS:FDFT1 EvolutionaryTrace:P37268
GenomeRNAi:2222 NextBio:9013 ArrayExpress:P37268 Bgee:P37268
CleanEx:HS_FDFT1 Genevestigator:P37268 GermOnline:ENSG00000079459
Uniprot:P37268
Length = 417
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 126/264 (47%), Positives = 172/264 (65%)
Query: 1 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGL 60
++ F +S F L + YQ I DI +RMG GMA+F+ K V S ++D+YC+YVAGLVG+
Sbjct: 122 LEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGI 181
Query: 61 GLSKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSK 117
GLS+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED R FWP+E+WS+
Sbjct: 182 GLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQG---GREFWPQEVWSR 238
Query: 118 YVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIG 177
YV KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI
Sbjct: 239 YVKKLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIA 298
Query: 178 TLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK 237
TLA CYNN +VF+G VK+R+G ++ NM V Y + + +I +DP+++K
Sbjct: 299 TLAACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSK 358
Query: 238 TLSRVEAIQKACMDSGVLNKRKSY 261
T + I+ + + L R Y
Sbjct: 359 TRQIISTIRTQNLPNCQLISRSHY 382
>UNIPROTKB|Q6IE76 [details] [associations]
symbol:fdft1 "FDFT1 protein" species:9913 "Bos taurus"
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008610 "lipid
biosynthetic process" evidence=IEA] [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity" evidence=IEA]
InterPro:IPR002060 InterPro:IPR006449 InterPro:IPR019845
Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045 GO:GO:0005783
GO:GO:0016021 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0008610 KO:K00801 GO:GO:0004310 TIGRFAMs:TIGR01559
UniGene:Bt.14255 HOVERGEN:HBG002370 OMA:ELRHAVC CTD:2222
GeneTree:ENSGT00390000016034 EMBL:DAAA02021921 EMBL:BN000317
IPI:IPI00852555 RefSeq:NP_001013022.1 SMR:Q6IE76 STRING:Q6IE76
Ensembl:ENSBTAT00000016504 GeneID:281767 KEGG:bta:281767
InParanoid:Q6IE76 ChEMBL:CHEMBL3605 NextBio:20805683 Uniprot:Q6IE76
Length = 417
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 127/264 (48%), Positives = 171/264 (64%)
Query: 1 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGL 60
++ F +S F L + YQ I D+ ++MG GMA+F+ K V S ++D+YC+YVAGLVG+
Sbjct: 122 LEDFPTISLEFRNLAEKYQTVIVDVCQKMGFGMAEFLDKRVTSEREWDKYCHYVAGLVGI 181
Query: 61 GLSKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSK 117
GLS+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED E R FWP+E WSK
Sbjct: 182 GLSRLFSASELEDPLIGEDTERANSMGLFLQKTNIIRDYLEDQRE---GREFWPQETWSK 238
Query: 118 YVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIG 177
YV KL D EN D AVQCLN+++TN L H+ D + Y+S LR+ +IF FCAIPQ+MAI
Sbjct: 239 YVKKLGDFAKPENIDLAVQCLNELITNTLHHIPDVITYLSRLRNQSIFNFCAIPQVMAIA 298
Query: 178 TLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK 237
TLA CYNN +VF+GVVK+R+G ++ NM V + + + +I +DP +TK
Sbjct: 299 TLAACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIHQYMEEIYHRIPNSDPCSTK 358
Query: 238 TLSRVEAIQKACMDSGVLNKRKSY 261
T + I+ + + L R Y
Sbjct: 359 TQQIISTIRTQNLPNCQLVSRSHY 382
>UNIPROTKB|Q32KR6 [details] [associations]
symbol:FDFT1 "Squalene synthase" species:9913 "Bos taurus"
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0051996 "squalene synthase activity" evidence=IEA] [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0006695 "cholesterol
biosynthetic process" evidence=IEA] InterPro:IPR002060
InterPro:IPR006449 InterPro:IPR019845 Pfam:PF00494 PROSITE:PS01044
PROSITE:PS01045 GO:GO:0016021 GO:GO:0005789 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016491 GO:GO:0006695
GO:GO:0008299 UniPathway:UPA00767 eggNOG:COG1562
HOGENOM:HOG000186940 GO:GO:0004310 GO:GO:0051996 TIGRFAMs:TIGR01559
EMBL:BC109959 IPI:IPI01028010 UniGene:Bt.14255
ProteinModelPortal:Q32KR6 SMR:Q32KR6 STRING:Q32KR6 PRIDE:Q32KR6
HOVERGEN:HBG002370 InParanoid:Q32KR6 OrthoDB:EOG4QVCC2
Uniprot:Q32KR6
Length = 417
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 127/264 (48%), Positives = 171/264 (64%)
Query: 1 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGL 60
++ F +S F L + YQ I D+ ++MG GMA+F+ K V S ++D+YC+YVAGLVG+
Sbjct: 122 LEDFPTISLEFRNLAEKYQTVIVDVCQKMGFGMAEFLDKRVTSEREWDKYCHYVAGLVGI 181
Query: 61 GLSKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSK 117
GLS+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED E R FWP+E WSK
Sbjct: 182 GLSRLFPASELEDPLIGEDTERANSMGLFLQKTNIIRDYLEDQRE---GREFWPQETWSK 238
Query: 118 YVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIG 177
YV KL D EN D AVQCLN+++TN L H+ D + Y+S LR+ +IF FCAIPQ+MAI
Sbjct: 239 YVKKLGDFAKPENIDLAVQCLNELITNTLHHIPDVITYLSRLRNQSIFNFCAIPQVMAIA 298
Query: 178 TLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK 237
TLA CYNN +VF+GVVK+R+G ++ NM V + + + +I +DP +TK
Sbjct: 299 TLAACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIHQYMEEIYHRIPNSDPCSTK 358
Query: 238 TLSRVEAIQKACMDSGVLNKRKSY 261
T + I+ + + L R Y
Sbjct: 359 TQQIISTIRTQNLPNCQLVSRSHY 382
>UNIPROTKB|I3LFX7 [details] [associations]
symbol:FDFT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0008610 "lipid
biosynthetic process" evidence=IEA] [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity" evidence=IEA]
InterPro:IPR002060 InterPro:IPR006449 InterPro:IPR019845
Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045 GO:GO:0005783
GO:GO:0016021 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0008610 GO:GO:0004310 TIGRFAMs:TIGR01559 OMA:ELRHAVC
GeneTree:ENSGT00390000016034 EMBL:FP476104
Ensembl:ENSSSCT00000024166 Uniprot:I3LFX7
Length = 417
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 125/264 (47%), Positives = 171/264 (64%)
Query: 1 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGL 60
++ F ++ F L + YQ I D+ ++MG GMA+F+ K V S ++D+YC+YVAGLVG+
Sbjct: 122 LEDFPTIALEFRNLAEKYQVVIVDVCRKMGFGMAEFLNKHVTSEREWDKYCHYVAGLVGI 181
Query: 61 GLSKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSK 117
GLS+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED E R FWP+E+WSK
Sbjct: 182 GLSRLFSASELEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQE---GREFWPQEVWSK 238
Query: 118 YVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIG 177
YV KL D EN D AVQCLN++VT+ L H+ D + Y+S LR+ +IF FCAIPQ+MAI
Sbjct: 239 YVKKLGDFAKPENVDLAVQCLNELVTSTLHHIPDVITYLSRLRNQSIFNFCAIPQVMAIA 298
Query: 178 TLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK 237
TLA CYNN +VF+GVVK+R+G ++ NM V + + + +I +DP + K
Sbjct: 299 TLAACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIHQYMEEIYHRIPDSDPYSAK 358
Query: 238 TLSRVEAIQKACMDSGVLNKRKSY 261
T + I+ + + L R Y
Sbjct: 359 TRQIISTIRTQNLPNCQLISRSHY 382
>POMBASE|SPBC646.05c [details] [associations]
symbol:erg9 "squalene synthase Erg9 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005783
"endoplasmic reticulum" evidence=IGI;IDA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IDA] [GO:0006696 "ergosterol
biosynthetic process" evidence=IGI] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0042175 "nuclear outer membrane-endoplasmic
reticulum membrane network" evidence=IDA] [GO:0051996 "squalene
synthase activity" evidence=IEA] InterPro:IPR002060
InterPro:IPR006449 InterPro:IPR019845 Pfam:PF00494 PROSITE:PS01044
PROSITE:PS01045 PomBase:SPBC646.05c GO:GO:0016021 GO:GO:0005789
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CU329671
GO:GO:0016491 GenomeReviews:CU329671_GR GO:GO:0006696 GO:GO:0008299
UniPathway:UPA00767 eggNOG:COG1562 HOGENOM:HOG000186940 KO:K00801
GO:GO:0004310 GO:GO:0051996 TIGRFAMs:TIGR01559 OMA:ELRHAVC
EMBL:L06071 PIR:B48057 PIR:T40581 RefSeq:NP_595363.1
ProteinModelPortal:P36596 IntAct:P36596 MINT:MINT-3377067
STRING:P36596 EnsemblFungi:SPBC646.05c.1 GeneID:2541110
KEGG:spo:SPBC646.05c OrthoDB:EOG4BP4MQ NextBio:20802223
Uniprot:P36596
Length = 460
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 115/245 (46%), Positives = 160/245 (65%)
Query: 3 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKF--ICKE-----VESIDDYDEYCYYVA 55
+F V +L L +GY++ I +ITK MG GMA + + ++ VE+I+D+++YC+YVA
Sbjct: 121 EFDVVIKEYLNLSEGYRNVISNITKEMGDGMAYYASLAEKNDGFSVETIEDFNKYCHYVA 180
Query: 56 GLVGLGLSKLFYASGTED--LA-PDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPR 112
GLVG+GLS+LF S ED LA ++SNS+GLFLQK NIIRDY ED ++ R FWPR
Sbjct: 181 GLVGIGLSRLFAQSKLEDPDLAHSQAISNSLGLFLQKVNIIRDYREDFDDN---RHFWPR 237
Query: 113 EIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 172
EIWSKY + DL +NS+KA++CL+DM NAL H D L Y+S L+ IF FCAIPQ
Sbjct: 238 EIWSKYTSSFGDLCLPDNSEKALECLSDMTANALTHATDALVYLSQLKTQEIFNFCAIPQ 297
Query: 173 IMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKND 232
+MAI TLA + N +VF+ VK+R+G ++I + N+ +V F ++ + K D
Sbjct: 298 VMAIATLAAVFRNPDVFQTNVKIRKGQAVQIILHSVNLKNVCDLFLRYTRDIHYKNTPKD 357
Query: 233 PNATK 237
PN K
Sbjct: 358 PNFLK 362
>UNIPROTKB|B4DJE5 [details] [associations]
symbol:FDFT1 "cDNA FLJ50548, highly similar to Squalene
synthetase (EC 2.5.1.21)" species:9606 "Homo sapiens" [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] InterPro:IPR002060 InterPro:IPR006449
InterPro:IPR019845 Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045
GO:GO:0005783 GO:GO:0016021 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0008610 HOGENOM:HOG000186940 GO:GO:0004310
TIGRFAMs:TIGR01559 HOVERGEN:HBG002370 UniGene:Hs.593928
HGNC:HGNC:3629 ChiTaRS:FDFT1 EMBL:AC069185 EMBL:AK296043
IPI:IPI00908715 SMR:B4DJE5 STRING:B4DJE5 Ensembl:ENST00000443614
UCSC:uc011kxf.2 Uniprot:B4DJE5
Length = 374
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 108/226 (47%), Positives = 149/226 (65%)
Query: 39 KEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRD 95
K+ + ++D+ YC+YVAGLVG+GLS+LF AS ED + D+ +NSMGLFLQKTNIIRD
Sbjct: 117 KDRQVLEDFPTYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRD 176
Query: 96 YLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKY 155
YLED R FWP+E+WS+YV KL D EN D AVQCLN+++TNAL H+ D + Y
Sbjct: 177 YLEDQQG---GREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHHIPDVITY 233
Query: 156 MSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYL 215
+S LR+ ++F FCAIPQ+MAI TLA CYNN +VF+G VK+R+G ++ NM V
Sbjct: 234 LSRLRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKA 293
Query: 216 AFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRKSY 261
Y + + +I +DP+++KT + I+ + + L R Y
Sbjct: 294 IIYQYMEEIYHRIPDSDPSSSKTRQIISTIRTQNLPNCQLISRSHY 339
>CGD|CAL0000316 [details] [associations]
symbol:ERG9 species:5476 "Candida albicans" [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0006696 "ergosterol
biosynthetic process" evidence=ISS] [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0051996 "squalene
synthase activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0005741 "mitochondrial outer membrane"
evidence=IEA] InterPro:IPR002060 InterPro:IPR006449
InterPro:IPR019845 Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045
CGD:CAL0000316 GO:GO:0005783 GO:GO:0016021 GO:GO:0005886
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0006696
EMBL:AACQ01000103 EMBL:AACQ01000102 KO:K00801 GO:GO:0004310
TIGRFAMs:TIGR01559 RefSeq:XP_714460.1 RefSeq:XP_714509.1
ProteinModelPortal:Q59Y33 STRING:Q59Y33 GeneID:3643854
GeneID:3643913 KEGG:cal:CaO19.11099 KEGG:cal:CaO19.3616
Uniprot:Q59Y33
Length = 448
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 112/260 (43%), Positives = 158/260 (60%)
Query: 3 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYYVAG 56
+F + + L YQD I+ IT +MG GMA +I E V +++DY+ YC+YVAG
Sbjct: 125 EFDKILNVYHRLKPQYQDIIKSITFKMGNGMADYILDEEFNVNGVATVEDYNLYCHYVAG 184
Query: 57 LVGLGLSKLFYAS--GTEDLAPDSLS--NSMGLFLQKTNIIRDYLEDINEIPKCRMFWPR 112
LVG GL+ LF + G + L ++ + +SMGLFLQKTNIIRDY ED+ + R FWPR
Sbjct: 185 LVGEGLTNLFVLANFGDKTLTENNFAKADSMGLFLQKTNIIRDYHEDLQD---GRSFWPR 241
Query: 113 EIWSKYVNKLEDLKYEENSDK---AVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCA 169
EIWSKY L+D + K V C+N++V NAL HV DCL Y+S ++D + F FCA
Sbjct: 242 EIWSKYTENLQDFHKVKTPAKEFAGVSCINELVLNALGHVTDCLDYLSLVKDPSSFSFCA 301
Query: 170 IPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKIN 229
IPQ+MA+ TLA YNN +V GVVK+R+G T ++I + + V F ++ ++ K +
Sbjct: 302 IPQVMAVATLAEVYNNPKVLHGVVKIRKGTTCRLILESRTLPGVVKIFKEYIQVINHKSS 361
Query: 230 KNDPNATKTLSRVEAIQKAC 249
DPN K + I++ C
Sbjct: 362 VRDPNYLKIGIKCGEIEQYC 381
>UNIPROTKB|Q59Y33 [details] [associations]
symbol:ERG9 "Putative uncharacterized protein ERG9"
species:237561 "Candida albicans SC5314" [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity" evidence=ISS]
[GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006696 "ergosterol
biosynthetic process" evidence=ISS] InterPro:IPR002060
InterPro:IPR006449 InterPro:IPR019845 Pfam:PF00494 PROSITE:PS01044
PROSITE:PS01045 CGD:CAL0000316 GO:GO:0005783 GO:GO:0016021
GO:GO:0005886 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0006696 EMBL:AACQ01000103 EMBL:AACQ01000102 KO:K00801
GO:GO:0004310 TIGRFAMs:TIGR01559 RefSeq:XP_714460.1
RefSeq:XP_714509.1 ProteinModelPortal:Q59Y33 STRING:Q59Y33
GeneID:3643854 GeneID:3643913 KEGG:cal:CaO19.11099
KEGG:cal:CaO19.3616 Uniprot:Q59Y33
Length = 448
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 112/260 (43%), Positives = 158/260 (60%)
Query: 3 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYYVAG 56
+F + + L YQD I+ IT +MG GMA +I E V +++DY+ YC+YVAG
Sbjct: 125 EFDKILNVYHRLKPQYQDIIKSITFKMGNGMADYILDEEFNVNGVATVEDYNLYCHYVAG 184
Query: 57 LVGLGLSKLFYAS--GTEDLAPDSLS--NSMGLFLQKTNIIRDYLEDINEIPKCRMFWPR 112
LVG GL+ LF + G + L ++ + +SMGLFLQKTNIIRDY ED+ + R FWPR
Sbjct: 185 LVGEGLTNLFVLANFGDKTLTENNFAKADSMGLFLQKTNIIRDYHEDLQD---GRSFWPR 241
Query: 113 EIWSKYVNKLEDLKYEENSDK---AVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCA 169
EIWSKY L+D + K V C+N++V NAL HV DCL Y+S ++D + F FCA
Sbjct: 242 EIWSKYTENLQDFHKVKTPAKEFAGVSCINELVLNALGHVTDCLDYLSLVKDPSSFSFCA 301
Query: 170 IPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKIN 229
IPQ+MA+ TLA YNN +V GVVK+R+G T ++I + + V F ++ ++ K +
Sbjct: 302 IPQVMAVATLAEVYNNPKVLHGVVKIRKGTTCRLILESRTLPGVVKIFKEYIQVINHKSS 361
Query: 230 KNDPNATKTLSRVEAIQKAC 249
DPN K + I++ C
Sbjct: 362 VRDPNYLKIGIKCGEIEQYC 381
>ASPGD|ASPL0000036668 [details] [associations]
symbol:AN10396 species:162425 "Emericella nidulans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity" evidence=IEA]
[GO:0051996 "squalene synthase activity" evidence=IEA] [GO:0006696
"ergosterol biosynthetic process" evidence=IEA] InterPro:IPR002060
InterPro:IPR006449 InterPro:IPR019845 Pfam:PF00494 PROSITE:PS01044
PROSITE:PS01045 GO:GO:0016021 GO:GO:0005741 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:BN001306 GO:GO:0008610
GO:GO:0004310 TIGRFAMs:TIGR01559 ProteinModelPortal:C8VHP8
EnsemblFungi:CADANIAT00009666 OMA:FNFVAIP Uniprot:C8VHP8
Length = 470
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 110/245 (44%), Positives = 151/245 (61%)
Query: 3 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK------EVESIDDYDEYCYYVAG 56
QFH+V T F + YQ I+DIT +MG GMA + K V+++++YD YCYYVAG
Sbjct: 127 QFHNVVTEFRNMKPAYQVIIKDITDKMGNGMADYARKATFEDASVKTVEEYDLYCYYVAG 186
Query: 57 LVGLGLSKLFYAS--GTEDLAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPRE 113
LVG GL++LF + G L + L SMGLFLQKTNIIRD ED ++ R FWP+
Sbjct: 187 LVGEGLTRLFVEAEFGNPALLKRTRLHKSMGLFLQKTNIIRDIREDEDD---GRRFWPKS 243
Query: 114 IWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQI 173
IWSK+V+ EDL EN + A+ C ++MV NAL HVEDCL Y++ LR+ ++F FCAIPQ
Sbjct: 244 IWSKHVDNFEDLFKPENREAALNCNSEMVLNALEHVEDCLFYLAGLREQSVFNFCAIPQA 303
Query: 174 MAIGTLALCYNNIEVFRGVVKMRRGLTAKVI-DRTNNMTDVYLAFYDFSNILKPKINKND 232
MAI TL LC+ N +F +K+ +G +++ + T N+ + F + + K D
Sbjct: 304 MAIATLELCFRNYTMFERNIKITKGDACQLMTESTQNLRVLCDVFRRYVRRIHKKNTPKD 363
Query: 233 PNATK 237
PN K
Sbjct: 364 PNFLK 368
>SGD|S000001233 [details] [associations]
symbol:ERG9 "Farnesyl-diphosphate farnesyl transferase
(squalene synthase)" species:4932 "Saccharomyces cerevisiae"
[GO:0006629 "lipid metabolic process" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IEA] [GO:0006696 "ergosterol
biosynthetic process" evidence=IMP] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0016765 "transferase activity,
transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] [GO:0051996 "squalene synthase activity"
evidence=IEA;IDA] [GO:0016021 "integral to membrane"
evidence=IEA;IDA] [GO:0016126 "sterol biosynthetic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IDA] [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity"
evidence=IEA;IDA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;IDA] [GO:0006694
"steroid biosynthetic process" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0008202 "steroid metabolic process"
evidence=IEA] InterPro:IPR002060 InterPro:IPR006449
InterPro:IPR019845 Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045
SGD:S000001233 GO:GO:0005783 GO:GO:0016021 GO:GO:0005741
GO:GO:0005789 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
EMBL:BK006934 GO:GO:0016491 EMBL:U00030 GO:GO:0006696 GO:GO:0008299
UniPathway:UPA00767 eggNOG:COG1562 HOGENOM:HOG000186940 KO:K00801
GO:GO:0004310 GO:GO:0051996 TIGRFAMs:TIGR01559 OMA:ELRHAVC
GeneTree:ENSGT00390000016034 OrthoDB:EOG4BP4MQ EMBL:M63979
EMBL:X59959 PIR:S46682 RefSeq:NP_012060.1 ProteinModelPortal:P29704
SMR:P29704 DIP:DIP-4576N IntAct:P29704 MINT:MINT-491875
STRING:P29704 PaxDb:P29704 PeptideAtlas:P29704 EnsemblFungi:YHR190W
GeneID:856597 KEGG:sce:YHR190W CYGD:YHR190w
BioCyc:MetaCyc:YHR190W-MONOMER NextBio:982487 ArrayExpress:P29704
Genevestigator:P29704 GermOnline:YHR190W Uniprot:P29704
Length = 444
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 107/256 (41%), Positives = 156/256 (60%)
Query: 1 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYYV 54
+ F + F +L YQ+ I++IT++MG GMA +I E ++++ DYD YC+YV
Sbjct: 123 LTDFESILIEFHKLKPEYQEVIKEITEKMGNGMADYILDENYNLNGLQTVHDYDVYCHYV 182
Query: 55 AGLVGLGLSKLFYAS--GTEDL-APDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWP 111
AGLVG GL++L + E L + + L SMGLFLQKTNIIRDY ED+ + R FWP
Sbjct: 183 AGLVGDGLTRLIVIAKFANESLYSNEQLYESMGLFLQKTNIIRDYNEDLVD---GRSFWP 239
Query: 112 REIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIP 171
+EIWS+Y +L+D EN + C+N +V NAL HV D L Y++ + + + F+FCAIP
Sbjct: 240 KEIWSQYAPQLKDFMKPENEQLGLDCINHLVLNALSHVIDVLTYLAGIHEQSTFQFCAIP 299
Query: 172 QIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKN 231
Q+MAI TLAL +NN EV G VK+R+G T +I ++ + F + +K K+
Sbjct: 300 QVMAIATLALVFNNREVLHGNVKIRKGTTCYLILKSRTLRGCVEIFDYYLRDIKSKLAVQ 359
Query: 232 DPNATKTLSRVEAIQK 247
DPN K ++ I++
Sbjct: 360 DPNFLKLNIQISKIEQ 375
>UNIPROTKB|Q60AN4 [details] [associations]
symbol:sqs "Squalene synthase" species:243233
"Methylococcus capsulatus str. Bath" [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity" evidence=ISS]
[GO:0019745 "pentacyclic triterpenoid biosynthetic process"
evidence=ISS] InterPro:IPR002060 InterPro:IPR019845 Pfam:PF00494
PROSITE:PS01044 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0019745 EMBL:AE017282
GenomeReviews:AE017282_GR KO:K00801 OMA:ELEEYCW GO:GO:0004310
RefSeq:YP_113313.1 ProteinModelPortal:Q60AN4 GeneID:3102259
KEGG:mca:MCA0813 PATRIC:22605424 HOGENOM:HOG000230420
ProtClustDB:CLSK644100 Uniprot:Q60AN4
Length = 362
Score = 154 (59.3 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 53/172 (30%), Positives = 85/172 (49%)
Query: 19 QDAIEDITKRMGAGMAKFICKEV----ESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDL 74
Q+A+ + M GMA+F K++ E + +YCYYVAG+VG L++LF E
Sbjct: 129 QEALAECVATMSRGMAEFQDKDLRHGLEDLRQMGDYCYYVAGVVGEMLTRLFCHYSPEIA 188
Query: 75 APDS----LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFW-PREIWSKYVNKLEDLKYEE 129
A S L+ S G LQ TNI++D +D + C W P+E++++ L +L+
Sbjct: 189 AHRSRLMELAVSFGQGLQMTNILKDLWDD-HARGVC---WLPQEVFTECGFSLTELRPHH 244
Query: 130 NSDKAVQCLNDMVTNALMHVEDCLKYMSALRDH--AIFRFCAIPQIMAIGTL 179
+ V+ ++ A H+ + L+Y + H I FC MA+ TL
Sbjct: 245 ANPDFVRGFERLIGVAHAHLRNALEYTLLIPRHETGIREFCLWALGMAVLTL 296
>UNIPROTKB|E9PS69 [details] [associations]
symbol:FDFT1 "Squalene synthase" species:9606 "Homo
sapiens" [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] InterPro:IPR002060
Pfam:PF00494 GO:GO:0009058 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 HGNC:HGNC:3629 ChiTaRS:FDFT1
EMBL:AC069185 IPI:IPI00977667 ProteinModelPortal:E9PS69 SMR:E9PS69
Ensembl:ENST00000532266 ArrayExpress:E9PS69 Bgee:E9PS69
Uniprot:E9PS69
Length = 113
Score = 99 (39.9 bits), Expect = 0.00011, P = 0.00011
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 1 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDE 49
++ F +S F L + YQ I DI +RMG GMA+F+ K V S ++D+
Sbjct: 58 LEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDK 106
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.396 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 295 283 0.00084 115 3 11 22 0.47 33
33 0.42 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 24
No. of states in DFA: 608 (65 KB)
Total size of DFA: 205 KB (2115 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.58u 0.12s 23.70t Elapsed: 00:00:02
Total cpu time: 23.58u 0.12s 23.70t Elapsed: 00:00:02
Start: Fri May 10 04:29:05 2013 End: Fri May 10 04:29:07 2013