BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022527
(295 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P53800|FDFT_NICBE Squalene synthase OS=Nicotiana benthamiana PE=2 SV=1
Length = 411
Score = 478 bits (1230), Expect = e-134, Method: Compositional matrix adjust.
Identities = 239/293 (81%), Positives = 259/293 (88%)
Query: 1 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGL 60
MDQFHHVSTAFLEL K YQ AIEDIT RMGAGMAKFICKEVE+ DDYDEYC+YVAGLVGL
Sbjct: 119 MDQFHHVSTAFLELRKHYQQAIEDITMRMGAGMAKFICKEVETTDDYDEYCHYVAGLVGL 178
Query: 61 GLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 120
GLSKLF+AS EDLA DSLSNSMGLFLQKTNIIRDYLEDINE+PKCRMFWPREIWSKYVN
Sbjct: 179 GLSKLFHASEKEDLASDSLSNSMGLFLQKTNIIRDYLEDINEVPKCRMFWPREIWSKYVN 238
Query: 121 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 180
KLE+LKYE+NS KAVQCLNDMVTNAL HVEDCL YMSALRD +IFRFCAIPQ+MAIGTLA
Sbjct: 239 KLEELKYEDNSAKAVQCLNDMVTNALPHVEDCLTYMSALRDPSIFRFCAIPQVMAIGTLA 298
Query: 181 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 240
+CY+NIEVFRGVVKMRRGLTAKVIDRT + DVY AF+DFS +LK K+N NDPNATKTL
Sbjct: 299 MCYDNIEVFRGVVKMRRGLTAKVIDRTRTIADVYGAFFDFSCMLKSKVNNNDPNATKTLK 358
Query: 241 RVEAIQKACMDSGVLNKRKSYIIQSELRYSSTMIVIFFIILAIIFSYLSSTRA 293
R+E I K C DSG LNKRKSYII+SE YS +IV+ FIILAII + LS R+
Sbjct: 359 RLEVILKTCRDSGTLNKRKSYIIRSEPNYSPVLIVVIFIILAIILAQLSGNRS 411
>sp|P53799|FDFT_ARATH Squalene synthase OS=Arabidopsis thaliana GN=SQS1 PE=2 SV=1
Length = 410
Score = 468 bits (1205), Expect = e-131, Method: Compositional matrix adjust.
Identities = 220/292 (75%), Positives = 259/292 (88%), Gaps = 3/292 (1%)
Query: 1 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGL 60
MDQFHHVS AFLEL KGYQ+AIE+IT+RMGAGMAKFIC+EVE++DDYDEYC+YVAGLVGL
Sbjct: 119 MDQFHHVSAAFLELEKGYQEAIEEITRRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGL 178
Query: 61 GLSKLFYASGTEDLAPD--SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 118
GLSKLF A+G+E L PD ++SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIW KY
Sbjct: 179 GLSKLFLAAGSEVLTPDWEAISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKY 238
Query: 119 VNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGT 178
+KLEDLKYEEN++K+VQCLN+MVTNALMH+EDCLKYM +LRD +IFRFCAIPQIMAIGT
Sbjct: 239 ADKLEDLKYEENTNKSVQCLNEMVTNALMHIEDCLKYMVSLRDPSIFRFCAIPQIMAIGT 298
Query: 179 LALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKT 238
LALCYNN +VFRGVVK+RRGLTAKVIDRT M DVY AFYDFS +LK K++KNDPNA+KT
Sbjct: 299 LALCYNNEQVFRGVVKLRRGLTAKVIDRTKTMADVYGAFYDFSCMLKTKVDKNDPNASKT 358
Query: 239 LSRVEAIQKACMDSGVLNKRKSYIIQSELRYSSTMIVIFFIILAIIFSYLSS 290
L+R+EA+QK C D+GVL RKSY + + + +S I++ I+LAI+F+YL +
Sbjct: 359 LNRLEAVQKLCRDAGVLQNRKSY-VNDKGQPNSVFIIMVVILLAIVFAYLRA 409
>sp|Q9SDW9|BSS_BOTBR Squalene synthase OS=Botryococcus braunii GN=BSS PE=1 SV=1
Length = 461
Score = 273 bits (699), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 139/259 (53%), Positives = 176/259 (67%), Gaps = 10/259 (3%)
Query: 1 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEV-ESIDDYDEYCYYVAGLVG 59
+DQ+ V++ FL+L Q+ I DITKRMG GMA F+ K V +++ DYD YC+YVAG+VG
Sbjct: 122 LDQYPKVTSVFLKLTPREQEIIADITKRMGNGMADFVHKGVPDTVGDYDLYCHYVAGVVG 181
Query: 60 LGLSKLFYASGTEDLA---PDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWS 116
LGLS+LF ASG + + + LSN MGLFLQKTNIIRDY EDINE+P RMFWPREIW
Sbjct: 182 LGLSQLFVASGLQSPSLTRSEDLSNHMGLFLQKTNIIRDYFEDINELPAPRMFWPREIWG 241
Query: 117 KYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAI 176
KY N L + K N A+ CLN+MVT+AL H CL+YMS + D IF FCAIPQ MA
Sbjct: 242 KYANNLAEFKDPANKAAAMCCLNEMVTDALRHAVYCLQYMSMIEDPQIFNFCAIPQTMAF 301
Query: 177 GTLALCYNNIEVFRG---VVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKIN---K 230
GTL+LCYNN +F G VK+RRG TAK++ +NNM +Y F +F+ L+ + N
Sbjct: 302 GTLSLCYNNYTIFTGPKAAVKLRRGTTAKLMYTSNNMFAMYRHFLNFAEKLEVRCNTETS 361
Query: 231 NDPNATKTLSRVEAIQKAC 249
DP+ T TL + I+ AC
Sbjct: 362 EDPSVTTTLEHLHKIKAAC 380
>sp|Q54DR1|FDFT_DICDI Squalene synthase OS=Dictyostelium discoideum GN=fdfT PE=3 SV=1
Length = 416
Score = 262 bits (670), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 128/256 (50%), Positives = 175/256 (68%), Gaps = 8/256 (3%)
Query: 1 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGL 60
++ F V FL LG GY I DIT+RM GM++F+ K V ++ ++D YC+YVAGLVG+
Sbjct: 122 VENFDKVVDVFLGLGDGYCTIIHDITRRMANGMSEFLQKSVVTLPEWDLYCHYVAGLVGI 181
Query: 61 GLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSK 117
GLSK+F+ASG E D SN MGLFLQKTNIIRDYLEDINE R+FWPR++W++
Sbjct: 182 GLSKIFHASGLESEWFATADDESNQMGLFLQKTNIIRDYLEDINE---KRIFWPRDVWAR 238
Query: 118 YVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIG 177
Y LE+ K + A+ CLND++TNAL H L YMS L++ + FCAIPQ+MAIG
Sbjct: 239 YTLHLENFKEAKYQIPALHCLNDLITNALSHALIALDYMSRLKNPQVINFCAIPQVMAIG 298
Query: 178 TLALCYNNIEVFRGVVKMRRGLTAKVID--RTNNMTDVYLAFYDFSNILKPKINKNDPNA 235
TL CYNN VF GVVK+R+G A ++D ++ +T Y F+ F+N ++ K+ NDP+A
Sbjct: 299 TLNACYNNYNVFTGVVKIRKGQRALIVDAIQSKGLTATYELFFKFANEMRHKVPPNDPSA 358
Query: 236 TKTLSRVEAIQKACMD 251
KT+ +E+I+K C++
Sbjct: 359 KKTIQHLESIEKLCIE 374
>sp|P53798|FDFT_MOUSE Squalene synthase OS=Mus musculus GN=Fdft1 PE=2 SV=2
Length = 416
Score = 259 bits (661), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 133/293 (45%), Positives = 184/293 (62%), Gaps = 14/293 (4%)
Query: 1 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGL 60
++ F +S F L + YQ I+DI RMG GMA+F+ K+V S D+D+YC+YVAGLVG+
Sbjct: 122 LEDFPTISLEFRNLAEKYQTVIDDICHRMGCGMAEFVDKDVTSKQDWDKYCHYVAGLVGI 181
Query: 61 GLSKLFYASGTED--LAPD-SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSK 117
GLS+LF AS ED + D +NSMGLFLQKTNIIRDYLED E R FWP+E+W +
Sbjct: 182 GLSRLFSASEFEDPIVGEDIECANSMGLFLQKTNIIRDYLEDQQE---GRKFWPQEVWGR 238
Query: 118 YVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIG 177
Y+ KLED EN D AVQCLN+++TN L H+ D L Y+S LR+ ++F FCAIPQ+MAI
Sbjct: 239 YIKKLEDFAKPENVDVAVQCLNELITNTLQHIPDVLTYLSRLRNQSVFNFCAIPQVMAIA 298
Query: 178 TLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK 237
TLA CYNN +VF+GVVK+R+G ++ NM V Y + + +I +DP+++K
Sbjct: 299 TLAACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYIEEIYHRIPNSDPSSSK 358
Query: 238 TLSRVEAIQKACMDSGVLNKRKSYIIQSELRYSSTMIVIFFIILAIIFSYLSS 290
T + I+ + + L R YS + ++ A+ + YLS+
Sbjct: 359 TKQVISKIRTQNLPNCQLISRS--------HYSPIYLSFIMLLAALSWQYLST 403
>sp|Q02769|FDFT_RAT Squalene synthase OS=Rattus norvegicus GN=Fdft1 PE=2 SV=1
Length = 416
Score = 258 bits (659), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 133/293 (45%), Positives = 184/293 (62%), Gaps = 14/293 (4%)
Query: 1 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGL 60
++ F +S F L + YQ I DI RMG GMA+F+ K+V S D+D+YC+YVAGLVG+
Sbjct: 122 LEDFPTISLEFRNLAEKYQTVIADICHRMGCGMAEFLNKDVTSKQDWDKYCHYVAGLVGI 181
Query: 61 GLSKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSK 117
GLS+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED E R FWP+E+W K
Sbjct: 182 GLSRLFSASEFEDPIVGEDTECANSMGLFLQKTNIIRDYLEDQQE---GRQFWPQEVWGK 238
Query: 118 YVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIG 177
YV KLED EN D AV+CLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI
Sbjct: 239 YVKKLEDFVKPENVDVAVKCLNELITNALQHIPDVITYLSRLRNQSVFNFCAIPQVMAIA 298
Query: 178 TLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK 237
TLA CYNN +VF+GVVK+R+G ++ NM V Y + + ++ +DP+A+K
Sbjct: 299 TLAACYNNHQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYIEEIYHRVPNSDPSASK 358
Query: 238 TLSRVEAIQKACMDSGVLNKRKSYIIQSELRYSSTMIVIFFIILAIIFSYLSS 290
+ I+ + + L R YS + ++ A+ + YLS+
Sbjct: 359 AKQLISNIRTQSLPNCQLISRS--------HYSPIYLSFIMLLAALSWQYLST 403
>sp|Q5R6U3|FDFT_PONAB Squalene synthase OS=Pongo abelii GN=FDFT1 PE=2 SV=1
Length = 417
Score = 251 bits (641), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 130/293 (44%), Positives = 183/293 (62%), Gaps = 14/293 (4%)
Query: 1 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGL 60
++ F +S F L + YQ I DI +RMG GMA+F+ K V S ++D+YC+YVAGLVG+
Sbjct: 122 LEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGI 181
Query: 61 GLSKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSK 117
GLS+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED R FWP+E+WS+
Sbjct: 182 GLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQ---GGREFWPQEVWSR 238
Query: 118 YVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIG 177
YV KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI
Sbjct: 239 YVKKLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIA 298
Query: 178 TLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK 237
TLA CYNN +VF+G VK+R+G ++ NM V Y + + +I +DP+++K
Sbjct: 299 TLAACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSK 358
Query: 238 TLSRVEAIQKACMDSGVLNKRKSYIIQSELRYSSTMIVIFFIILAIIFSYLSS 290
T + I+ + + L R YS + ++ A+ + YL++
Sbjct: 359 TRQIISTIRTQNLPNCQLISRS--------HYSPIYLSFVMLLAALSWQYLTT 403
>sp|P37268|FDFT_HUMAN Squalene synthase OS=Homo sapiens GN=FDFT1 PE=1 SV=1
Length = 417
Score = 251 bits (641), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 130/293 (44%), Positives = 183/293 (62%), Gaps = 14/293 (4%)
Query: 1 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGL 60
++ F +S F L + YQ I DI +RMG GMA+F+ K V S ++D+YC+YVAGLVG+
Sbjct: 122 LEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGI 181
Query: 61 GLSKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSK 117
GLS+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED R FWP+E+WS+
Sbjct: 182 GLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQ---GGREFWPQEVWSR 238
Query: 118 YVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIG 177
YV KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI
Sbjct: 239 YVKKLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIA 298
Query: 178 TLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK 237
TLA CYNN +VF+G VK+R+G ++ NM V Y + + +I +DP+++K
Sbjct: 299 TLAACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSK 358
Query: 238 TLSRVEAIQKACMDSGVLNKRKSYIIQSELRYSSTMIVIFFIILAIIFSYLSS 290
T + I+ + + L R YS + ++ A+ + YL++
Sbjct: 359 TRQIISTIRTQNLPNCQLISRS--------HYSPIYLSFVMLLAALSWQYLTT 403
>sp|Q32KR6|FDFT_BOVIN Squalene synthase OS=Bos taurus GN=FDFT1 PE=2 SV=1
Length = 417
Score = 249 bits (637), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 132/293 (45%), Positives = 182/293 (62%), Gaps = 14/293 (4%)
Query: 1 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGL 60
++ F +S F L + YQ I D+ ++MG GMA+F+ K V S ++D+YC+YVAGLVG+
Sbjct: 122 LEDFPTISLEFRNLAEKYQTVIVDVCQKMGFGMAEFLDKRVTSEREWDKYCHYVAGLVGI 181
Query: 61 GLSKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSK 117
GLS+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED E R FWP+E WSK
Sbjct: 182 GLSRLFPASELEDPLIGEDTERANSMGLFLQKTNIIRDYLEDQRE---GREFWPQETWSK 238
Query: 118 YVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIG 177
YV KL D EN D AVQCLN+++TN L H+ D + Y+S LR+ +IF FCAIPQ+MAI
Sbjct: 239 YVKKLGDFAKPENIDLAVQCLNELITNTLHHIPDVITYLSRLRNQSIFNFCAIPQVMAIA 298
Query: 178 TLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK 237
TLA CYNN +VF+GVVK+R+G ++ NM V + + + +I +DP +TK
Sbjct: 299 TLAACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIHQYMEEIYHRIPNSDPCSTK 358
Query: 238 TLSRVEAIQKACMDSGVLNKRKSYIIQSELRYSSTMIVIFFIILAIIFSYLSS 290
T + I+ + + L R YS + ++ A+ + YLS+
Sbjct: 359 TQQIISTIRTQNLPNCQLVSRS--------HYSPIYLSFVMLLAALSWQYLST 403
>sp|G0Y287|BOSS_BOTBR Botryococcus squalene synthase OS=Botryococcus braunii GN=SSL-2
PE=1 SV=1
Length = 465
Score = 248 bits (633), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 130/256 (50%), Positives = 160/256 (62%), Gaps = 7/256 (2%)
Query: 1 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK-EVESIDDYDEYCYYVAGLVG 59
M+ + V+ FL L G Q+ I D T+RMG GMA FI K EV S+ +YD YC+YVAGLVG
Sbjct: 118 MENYPLVTDVFLTLSPGAQEVIRDSTRRMGNGMADFIGKDEVHSVAEYDLYCHYVAGLVG 177
Query: 60 LGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWS 116
++K+F SG E +A L+N+MG FLQKTN+IRDYLEDINE P RMFWPREIW
Sbjct: 178 SAVAKIFVDSGLEKENLVAEVDLANNMGQFLQKTNVIRDYLEDINEEPAPRMFWPREIWG 237
Query: 117 KYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAI 176
KY +L D K N AVQCLN MVT+AL H E L + L++ I R C IP++M +
Sbjct: 238 KYAQELADFKDPANEKAAVQCLNHMVTDALRHCEIGLNVIPLLQNIGILRSCLIPEVMGL 297
Query: 177 GTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKIN---KNDP 233
TL LCYNN +VFRGVVKMRRG TAK+ + Y + +N L+ K DP
Sbjct: 298 RTLTLCYNNPQVFRGVVKMRRGETAKLFMSIYDKRSFYQTYLRLANELEAKCKGEASGDP 357
Query: 234 NATKTLSRVEAIQKAC 249
TL V IQK+C
Sbjct: 358 MVATTLKHVHGIQKSC 373
>sp|P36596|FDFT_SCHPO Squalene synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=erg9 PE=1 SV=1
Length = 460
Score = 216 bits (551), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 157/247 (63%), Gaps = 17/247 (6%)
Query: 3 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK-------EVESIDDYDEYCYYVA 55
+F V +L L +GY++ I +ITK MG GMA + VE+I+D+++YC+YVA
Sbjct: 121 EFDVVIKEYLNLSEGYRNVISNITKEMGDGMAYYASLAEKNDGFSVETIEDFNKYCHYVA 180
Query: 56 GLVGLGLSKLFYASGTEDLAPD-----SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFW 110
GLVG+GLS+LF S ED PD ++SNS+GLFLQK NIIRDY ED ++ R FW
Sbjct: 181 GLVGIGLSRLFAQSKLED--PDLAHSQAISNSLGLFLQKVNIIRDYREDFDD---NRHFW 235
Query: 111 PREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAI 170
PREIWSKY + DL +NS+KA++CL+DM NAL H D L Y+S L+ IF FCAI
Sbjct: 236 PREIWSKYTSSFGDLCLPDNSEKALECLSDMTANALTHATDALVYLSQLKTQEIFNFCAI 295
Query: 171 PQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINK 230
PQ+MAI TLA + N +VF+ VK+R+G ++I + N+ +V F ++ + K
Sbjct: 296 PQVMAIATLAAVFRNPDVFQTNVKIRKGQAVQIILHSVNLKNVCDLFLRYTRDIHYKNTP 355
Query: 231 NDPNATK 237
DPN K
Sbjct: 356 KDPNFLK 362
>sp|P78589|FDFT_CANAX Squalene synthase OS=Candida albicans GN=ERG9 PE=3 SV=1
Length = 448
Score = 209 bits (531), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 112/260 (43%), Positives = 158/260 (60%), Gaps = 16/260 (6%)
Query: 3 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYYVAG 56
+F + + L YQD I+ IT +MG GMA +I E V +++DY+ YC+YVAG
Sbjct: 125 EFDKILNVYHRLKPQYQDIIKSITFKMGNGMADYILDEEFNVYGVATVEDYNLYCHYVAG 184
Query: 57 LVGLGLSKLFYAS--GTEDLAPDSLS--NSMGLFLQKTNIIRDYLEDINEIPKCRMFWPR 112
LVG GL+ LF + G + L ++ + +SMGLFLQKTNIIRDY ED+ + R FWPR
Sbjct: 185 LVGEGLTNLFVLANFGDKTLTENNFAKADSMGLFLQKTNIIRDYHEDLQD---GRSFWPR 241
Query: 113 EIWSKYVNKLEDLKYEENSDK---AVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCA 169
EIWSKY L+D + K V C+N++V NAL HV DCL Y+S ++D + F FCA
Sbjct: 242 EIWSKYTENLQDFHKVKTPAKEFAGVSCINELVLNALGHVTDCLDYLSLVKDPSSFSFCA 301
Query: 170 IPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKIN 229
IPQ+MA+ TLA YNN +V GVVK+R+G T ++I + + V F ++ ++ K +
Sbjct: 302 IPQVMAVATLAEVYNNPKVLHGVVKIRKGTTCRLILESRTLPGVVKIFKEYIQVINHKSS 361
Query: 230 KNDPNATKTLSRVEAIQKAC 249
DPN K + I++ C
Sbjct: 362 VRDPNYLKIGIKCGEIEQYC 381
>sp|G0Y288|BOCS_BOTBR Botryococcene synthase OS=Botryococcus braunii GN=SSL-3 PE=2 SV=1
Length = 383
Score = 202 bits (515), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/252 (39%), Positives = 156/252 (61%), Gaps = 4/252 (1%)
Query: 1 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGL 60
++++ V+ FL+L K Q I D+ R+GA M F+ ++V ++ D D Y + G V +
Sbjct: 117 IEEYPRVTKEFLKLNKQDQQFITDMCMRLGAEMTVFLKRDVLTVPDLDLYAFTNNGPVAI 176
Query: 61 GLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSK 117
L+KL+ D L + LS M +FL K N+IRD ED+ E P R++WP+EIW K
Sbjct: 177 CLTKLWVDRKFADPKLLDREDLSGHMAMFLGKINVIRDIKEDVLEDPP-RIWWPKEIWGK 235
Query: 118 YVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIG 177
Y+ L D+ E +A+ CLND++T+AL H+E CL+YM + D +F+FCA+P++M++
Sbjct: 236 YLKDLRDIIKPEYQKEALACLNDILTDALRHIEPCLQYMEMVWDEGVFKFCAVPELMSLA 295
Query: 178 TLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK 237
T+++CYNN +VF GVVKMRRG TAK+ NM +Y +F + ++ K + DPN
Sbjct: 296 TISVCYNNPKVFTGVVKMRRGETAKLFLSVTNMPALYKSFSAIAEEMEAKCVREDPNFAL 355
Query: 238 TLSRVEAIQKAC 249
T+ R++ +Q C
Sbjct: 356 TVKRLQDVQALC 367
>sp|Q9Y753|FDFT_YARLI Squalene synthase OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=SQS1 PE=3 SV=1
Length = 445
Score = 201 bits (511), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 168/300 (56%), Gaps = 22/300 (7%)
Query: 1 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYYV 54
+ +F V T F +L YQ+ I DIT RMG GMA ++ + V++I YD YC++V
Sbjct: 123 LQEFPVVMTEFNKLKPKYQEVIYDITDRMGNGMADYVIDDDFNNNGVDTIAAYDLYCHHV 182
Query: 55 AGLVGLGLSKL--FYASGTEDLAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWP 111
AG+VG GL+++ GT+ L + L SMGLFLQK NIIRDY EDI+ R FWP
Sbjct: 183 AGIVGEGLTRITILAGFGTDVLHENPRLQESMGLFLQKVNIIRDYREDID---VNRAFWP 239
Query: 112 REIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIP 171
REIW KY ++ D K + S KA+ C +D+V NAL H DCL Y+ + D + F FCAIP
Sbjct: 240 REIWHKYAEEMRDFKDPKYSKKALHCTSDLVANALGHATDCLDYLDNVTDPSTFTFCAIP 299
Query: 172 QIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKN 231
Q+MAI TL L Y N +VF+ VK+R+G T +I +N++ V F ++ + K + N
Sbjct: 300 QVMAIATLDLVYRNPDVFQKNVKLRKGTTVSLILEASNVSGVCDIFTRYARKVYKKSDPN 359
Query: 232 DPNATKTLSRVEAIQKACMDSGVLNKRK-----SYIIQSELRYSSTMIVIFFIILAIIFS 286
DPN RV + L KR+ I Q E M + + LA+IFS
Sbjct: 360 DPN----YFRVSVLCGKIEQHAALIKRQRGPPAKTIAQLEGE-RKEMALSLIVCLAVIFS 414
>sp|P29704|FDFT_YEAST Squalene synthase OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=ERG9 PE=1 SV=2
Length = 444
Score = 200 bits (509), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 107/256 (41%), Positives = 156/256 (60%), Gaps = 12/256 (4%)
Query: 1 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYYV 54
+ F + F +L YQ+ I++IT++MG GMA +I E ++++ DYD YC+YV
Sbjct: 123 LTDFESILIEFHKLKPEYQEVIKEITEKMGNGMADYILDENYNLNGLQTVHDYDVYCHYV 182
Query: 55 AGLVGLGLSKLFYAS--GTEDL-APDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWP 111
AGLVG GL++L + E L + + L SMGLFLQKTNIIRDY ED+ + R FWP
Sbjct: 183 AGLVGDGLTRLIVIAKFANESLYSNEQLYESMGLFLQKTNIIRDYNEDLVD---GRSFWP 239
Query: 112 REIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIP 171
+EIWS+Y +L+D EN + C+N +V NAL HV D L Y++ + + + F+FCAIP
Sbjct: 240 KEIWSQYAPQLKDFMKPENEQLGLDCINHLVLNALSHVIDVLTYLAGIHEQSTFQFCAIP 299
Query: 172 QIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKN 231
Q+MAI TLAL +NN EV G VK+R+G T +I ++ + F + +K K+
Sbjct: 300 QVMAIATLALVFNNREVLHGNVKIRKGTTCYLILKSRTLRGCVEIFDYYLRDIKSKLAVQ 359
Query: 232 DPNATKTLSRVEAIQK 247
DPN K ++ I++
Sbjct: 360 DPNFLKLNIQISKIEQ 375
>sp|G0Y286|PSDS_BOTBR Presqualene diphosphate synthase OS=Botryococcus braunii GN=SSL-1
PE=1 SV=1
Length = 403
Score = 200 bits (508), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/257 (40%), Positives = 147/257 (57%), Gaps = 5/257 (1%)
Query: 1 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGL 60
M++F V + +L Q + K MG GMA FI K++ ++D+YD YC+YVAG G+
Sbjct: 126 MERFPLVVSVLEKLPPATQQTFRENVKYMGNGMADFIDKQILTVDEYDLYCHYVAGSCGI 185
Query: 61 GLSKLFYASGTEDLAPDS--LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 118
++K+ DS SNS+GL LQK NII DY EDINE P+ RMFWP+EIW KY
Sbjct: 186 AVTKVIVQFNLATPEADSYDFSNSLGLLLQKANIITDYNEDINEEPRPRMFWPQEIWGKY 245
Query: 119 VNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGT 178
KL D EN D AV+CLN MVT+A+ H+E LK M D +FR A+ + A G
Sbjct: 246 AEKLADFNEPENIDTAVKCLNHMVTDAMRHIEPSLKGMVYFTDKTVFRALALLLVTAFGH 305
Query: 179 LALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINK---NDPNA 235
L+ YNN VF+ V+ R+G A+++ + N+ ++ +N + + + NDP
Sbjct: 306 LSTLYNNPNVFKEKVRQRKGRIARLVMSSRNVPGLFRTCLKLANNFESRCKQETANDPTV 365
Query: 236 TKTLSRVEAIQKACMDS 252
T+ R+++IQ C D
Sbjct: 366 AMTIKRLQSIQATCRDG 382
>sp|Q9HGZ6|FDFT_CANGA Squalene synthase OS=Candida glabrata (strain ATCC 2001 / CBS 138 /
JCM 3761 / NBRC 0622 / NRRL Y-65) GN=ERG9 PE=3 SV=2
Length = 443
Score = 199 bits (506), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 173/296 (58%), Gaps = 26/296 (8%)
Query: 1 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYYV 54
+ +F + + +L YQ I+ IT MG GMA +I E V+++ DYD+YC+YV
Sbjct: 123 LTEFPCILGEYHKLKPEYQKVIKRITGLMGNGMADYILDENFNLNGVQTVKDYDKYCHYV 182
Query: 55 AGLVGLGLSKLFYASG--TEDLAPD----SLSNSMGLFLQKTNIIRDYLEDINEIPKCRM 108
AGLVG GL++L +G ++DL L SMGLFLQKTNIIRDY ED+++ R
Sbjct: 183 AGLVGDGLTELIVLAGFGSDDLYHGKNSFQLYESMGLFLQKTNIIRDYAEDLDD---GRS 239
Query: 109 FWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC 168
FWP+EIWS+Y KL D + +N+ K V C+N +V NAL HV D L Y+S++ + + F+FC
Sbjct: 240 FWPKEIWSEYATKLTDFRDPKNTQKGVDCINHLVLNALTHVIDVLTYLSSIHEQSSFQFC 299
Query: 169 AIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKI 228
AIPQ+MAI TLA +NN EV R VK+R+G T +I + + F + +K ++
Sbjct: 300 AIPQVMAIATLAKVFNNPEVLRKNVKIRKGTTCDLILNSRTLKGCVDIFQYYLRDMKQRL 359
Query: 229 NKNDPNATKTLSRVEAIQKAC-------MDSGVLNKRKSYI---IQSELRYSSTMI 274
DPN K +V I++ + +GV R++ I +Q L++ + +I
Sbjct: 360 PVEDPNYLKFNIQVAKIEQFIEEMFQDNLPAGV-EPRETMIYLKVQERLKWDTQVI 414
>sp|Q752X9|FDFT_ASHGO Squalene synthase OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=ERG9 PE=3 SV=1
Length = 441
Score = 198 bits (503), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 107/246 (43%), Positives = 145/246 (58%), Gaps = 15/246 (6%)
Query: 3 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYYVAG 56
+F + F +L YQ I DIT +MG GMA +I E +E+I DYD YC+YVAG
Sbjct: 125 EFSTILAEFHKLKPEYQQVIADITHKMGNGMADYILDEKFNLSGLETIQDYDRYCHYVAG 184
Query: 57 LVGLGLSKL-----FYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWP 111
LVG GL+ L F + G +PD L SMGLFLQKTNIIRDY ED+ + R FWP
Sbjct: 185 LVGDGLTHLIMLAKFSSPGLYYDSPD-LYESMGLFLQKTNIIRDYAEDLAD---GRSFWP 240
Query: 112 REIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIP 171
+EIWS Y + L EN+ V C+N +V NAL HV+ L Y+++LR+ + F+FCAIP
Sbjct: 241 KEIWSHYADDLASFSKPENATAGVYCINHLVLNALGHVQHVLTYLASLREQSSFQFCAIP 300
Query: 172 QIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKN 231
Q+MAI TLAL + N V + VK+R+G T +I ++ F + ++ ++
Sbjct: 301 QVMAIATLALVFGNERVLQTSVKIRKGTTCYLILKSRTFQGCVEIFEHYLRDIRKRLTVA 360
Query: 232 DPNATK 237
DPN K
Sbjct: 361 DPNYLK 366
>sp|O74165|FDFT_CYBJA Squalene synthase OS=Cyberlindnera jadinii GN=ERG9 PE=3 SV=1
Length = 443
Score = 190 bits (482), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/253 (41%), Positives = 151/253 (59%), Gaps = 15/253 (5%)
Query: 3 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYYVAG 56
+F + + EL YQ I++IT++MG GMA +I E + +I+DYD YCYYVAG
Sbjct: 125 EFDRILGQYHELKPQYQKVIKEITEKMGNGMADYIENENFNSNGLLTIEDYDLYCYYVAG 184
Query: 57 LVGLGLSKLFYAS--GTEDLAPD-SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPRE 113
LVG GL++L + G +L+ + L SMGLFLQKTNIIRDY ED + R FWP+E
Sbjct: 185 LVGDGLTQLIVLAKFGNSELSVNKQLFKSMGLFLQKTNIIRDYEEDQVD---GRAFWPKE 241
Query: 114 IWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQI 173
IW KY N+L D EN + + C++++V NAL HV D L+Y++ + + F FCAIPQ+
Sbjct: 242 IWGKYANELSDFMKPENQSQGLWCISELVCNALDHVIDVLQYLALVEEQTSFNFCAIPQV 301
Query: 174 MAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDP 233
MAI TL L + N +V VK+R+G T +I + + F + + K + +DP
Sbjct: 302 MAIATLELVFQNPQVLTQHVKIRKGTTVSLILESRTLEGCARIFRRYLRKIHHKSHPSDP 361
Query: 234 NATK---TLSRVE 243
N + T+ ++E
Sbjct: 362 NYLRLGITIGKIE 374
>sp|Q7S4Z6|FDFT_NEUCR Probable squalene synthase OS=Neurospora crassa (strain ATCC 24698
/ 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=erg-9 PE=3 SV=1
Length = 481
Score = 186 bits (473), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/242 (42%), Positives = 143/242 (59%), Gaps = 13/242 (5%)
Query: 3 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYYVAG 56
F V ++ K Y D I +IT +MG GMA + V +I++Y+ YC+YVAG
Sbjct: 128 HFDDVIAELKKVKKPYYDIIREITVKMGNGMADYALNAEHNTNGVNTIEEYELYCHYVAG 187
Query: 57 LVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPRE 113
LVG GL++LF S + L L+ SMG FLQKTNIIRD ED + R FWP+
Sbjct: 188 LVGEGLTRLFVESNLANPALLERMELTESMGQFLQKTNIIRDIHEDYVD---KRRFWPKT 244
Query: 114 IWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQI 173
IWSKYVN +D+ EN +KA+QC ++MV NAL H EDCL YM+ +RD ++F F AIPQ
Sbjct: 245 IWSKYVNTWDDMFKPENREKALQCSSEMVLNALKHTEDCLFYMAGMRDQSVFNFVAIPQA 304
Query: 174 MAIGTLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMTDVYLAFYDFSNILKPKINKND 232
MAI TL L + N +F VK+ +G ++ ++ T N+ V F ++ + K + D
Sbjct: 305 MAIATLELVFRNPAIFERNVKITKGDACQLMMESTQNLRVVCEVFRRYARRIHKKNDPRD 364
Query: 233 PN 234
PN
Sbjct: 365 PN 366
>sp|Q92459|FDFT_USTMA Squalene synthase OS=Ustilago maydis (strain 521 / FGSC 9021)
GN=ERG9 PE=3 SV=2
Length = 572
Score = 173 bits (439), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/273 (37%), Positives = 147/273 (53%), Gaps = 29/273 (10%)
Query: 3 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFI------CKEVESIDDYDEYCYYVAG 56
+F V + L GY+ I DIT +MGAGMA +I +V +D YC++VAG
Sbjct: 133 EFDKVIAEYQLLDVGYKTVISDITAKMGAGMASYIELSAKGPLKVAMWKHFDLYCHFVAG 192
Query: 57 LVGLGLSKLFYASGTEDLAPD---SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPRE 113
LVG GLS+LF S E LSN MGLFLQKTNIIRDY ED E R FWP++
Sbjct: 193 LVGEGLSRLFSESKLERPWLGHQLELSNHMGLFLQKTNIIRDYAEDCEE---GRYFWPQQ 249
Query: 114 IWSKYVNKLE----------DLKY-------EENSDKAVQCLNDMVTNALMHVEDCLKYM 156
W K E ++K E +++ L+ M+ +A+ H L Y+
Sbjct: 250 CWGDDFAKFESQPDVAKGIIEIKPGHFRPADNELGQRSMYVLSSMLLDAMSHATHALDYL 309
Query: 157 SALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLA 216
+ L++ ++F FCAIPQ+MAI TL L +NN +VF+ VK+R+G+ +I R N DV
Sbjct: 310 ALLKEQSVFNFCAIPQVMAIATLELMFNNPDVFKKNVKIRKGVAVGLILRAVNPRDVAYT 369
Query: 217 FYDFSNILKPKINKNDPNATKTLSRVEAIQKAC 249
F +S + +++ DPN T+ + I++ C
Sbjct: 370 FLHYSRKMHARLSPADPNFTRWSVELARIEQWC 402
>sp|P37294|CRTB_SYNY3 Phytoene synthase OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=crtB PE=3 SV=1
Length = 337
Score = 44.7 bits (104), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 12/133 (9%)
Query: 42 ESIDDYDEYCYYVAGLVGLGLSKLF---YASGTEDLAPDSL------SNSMGLFLQKTNI 92
++ ++ D YCY VAG VGL S + +G PD++ + ++G+ Q TNI
Sbjct: 159 QTFEELDLYCYRVAGTVGLMSSAVLGVDTGNGQAPWQPDAVYIPQEEAIALGVANQLTNI 218
Query: 93 IRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDC 152
+RD ED+ + R++ P E ++ +DL N D+ + + A + ED
Sbjct: 219 LRDVGEDVE---RGRIYLPLEDLERFNYSEQDLLNGVNDDRWRSLMKFEIDRARHYFEDA 275
Query: 153 LKYMSALRDHAIF 165
+ + AL A +
Sbjct: 276 ERGIRALNRDARW 288
>sp|P21683|CRTB_PANAN Phytoene synthase OS=Pantoea ananas GN=crtB PE=3 SV=2
Length = 309
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 40 EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLED 99
+ +DD YCY+VAG+VGL ++++ G D A + +GL Q TNI RD ++D
Sbjct: 124 QYSQLDDTLRYCYHVAGVVGLMMAQIM---GVRDNATLDRACDLGLAFQLTNIARDIVDD 180
Query: 100 IN 101
+
Sbjct: 181 AH 182
>sp|P54975|CRTB_PARSN Phytoene synthase OS=Paracoccus sp. (strain N81106 / MBIC 01143)
GN=crtB PE=3 SV=2
Length = 304
Score = 40.0 bits (92), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 38 CKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYL 97
++ ++DD EY Y+VAG+VG+ ++++ G D + +GL Q TNI RD +
Sbjct: 118 ARDYRTLDDVLEYSYHVAGIVGVMMARVM---GVRDDPVLDRACDLGLAFQLTNIARDVI 174
Query: 98 EDINEIPKC 106
+D I +C
Sbjct: 175 DD-ARIGRC 182
>sp|P22872|CRTB_ESCVU Phytoene synthase OS=Escherichia vulneris GN=crtB PE=3 SV=1
Length = 309
Score = 40.0 bits (92), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 43 SIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINE 102
+ +D YCY+VAG+VGL ++++ G D + +GL Q TNI RD ++D
Sbjct: 127 TFEDTLRYCYHVAGVVGLMMARVM---GVRDERVLDRACDLGLAFQLTNIARDIIDDA-A 182
Query: 103 IPKC 106
I +C
Sbjct: 183 IDRC 186
>sp|Q4UMD8|SYI_RICFE Isoleucine--tRNA ligase OS=Rickettsia felis (strain ATCC VR-1525 /
URRWXCal2) GN=ileS PE=3 SV=1
Length = 1094
Score = 38.5 bits (88), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 125 LKYEENSDKAVQCLNDMVTNALMHVEDCL--KYMSALRDHAIFR--FCAIPQIMAIGTLA 180
+K + D+ V+ LN + HV+D L K++ RD +I R F P + +
Sbjct: 436 VKVTQFKDRMVE-LNQQINWIPFHVKDNLFGKWLENARDWSISRNRFWGTP-LPVWKSDD 493
Query: 181 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 240
Y I+V+ + ++ + KV TD++ F D + +P N NDP T+
Sbjct: 494 PKYPRIDVYGSIEELEKDFGVKV-------TDLHRPFID--ELARP--NPNDPTGKSTMR 542
Query: 241 RVEAIQKACMDSGVL 255
R+E + +SG +
Sbjct: 543 RIEDVFDCWFESGSM 557
>sp|P37271|PSY_ARATH Phytoene synthase, chloroplastic OS=Arabidopsis thaliana GN=PSY1
PE=2 SV=2
Length = 422
Score = 38.5 bits (88), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 13/147 (8%)
Query: 16 KGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLA 75
+ ++D IE + RM +++ ++ DD YCYYVAG VGL +
Sbjct: 223 QPFRDMIEGM--RMDLKKSRY-----QNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKAT 275
Query: 76 PDSLSN---SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSD 132
+S+ N ++G+ Q TNI+RD ED + R++ P++ ++ ED+ + +D
Sbjct: 276 TESVYNAALALGIANQLTNILRDVGEDAR---RGRVYLPQDELAQAGLSDEDIFAGKVTD 332
Query: 133 KAVQCLNDMVTNALMHVEDCLKYMSAL 159
K + + A M ++ K ++ L
Sbjct: 333 KWRNFMKMQLKRARMFFDEAEKGVTEL 359
>sp|P53797|PSY_NARPS Phytoene synthase, chloroplastic OS=Narcissus pseudonarcissus
GN=PSY PE=2 SV=1
Length = 423
Score = 38.5 bits (88), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 46 DYDE---YCYYVAGLVGLGLSKLFYASGTEDLA-PDSLSN---SMGLFLQKTNIIRDYLE 98
++DE YCYYVAG VGL +S E LA +S+ N ++G+ Q TNI+RD E
Sbjct: 240 NFDELYLYCYYVAGTVGL-MSVPVMGIAPESLAEAESVYNAALALGIANQLTNILRDVGE 298
Query: 99 DINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSA 158
D + R++ P++ ++ ED+ + +DK + + A E K ++
Sbjct: 299 DAR---RGRIYLPQDELAEAGLSDEDVFTGKVTDKWRSFMKRQIKRARTFFEQAEKGVTE 355
Query: 159 L 159
L
Sbjct: 356 L 356
>sp|A8GPA1|SYI_RICAH Isoleucine--tRNA ligase OS=Rickettsia akari (strain Hartford)
GN=ileS PE=3 SV=1
Length = 1103
Score = 38.1 bits (87), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 125 LKYEENSDKAVQCLNDMVTNALMHVEDCL--KYMSALRDHAIFR--FCAIPQIMAIGTLA 180
+K + D+ V+ LN + HV+D L K++ RD +I R F P + +
Sbjct: 440 VKVTQFKDRMVE-LNQQINWIPHHVKDNLFGKWLENARDWSISRNRFWGTP-LPVWKSDD 497
Query: 181 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 240
Y I+V+ + ++ + KV TD++ F D + +P N NDP T+
Sbjct: 498 PKYPRIDVYGSIEELEKDFGVKV-------TDLHRPFID--KLTRP--NPNDPTGKSTMR 546
Query: 241 RVEAIQKACMDSGVL 255
R+E + +SG +
Sbjct: 547 RIEDVFDCWFESGSM 561
>sp|Q9SSU8|PSY_DAUCA Phytoene synthase, chloroplastic OS=Daucus carota GN=PSY PE=2 SV=1
Length = 398
Score = 37.7 bits (86), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 12/78 (15%)
Query: 42 ESIDDYDEYCYYVAGLVGL------GLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRD 95
++ D+ YCYYVAG VGL G++ A+ TE + +L ++G+ Q TNI+RD
Sbjct: 221 QTFDELYLYCYYVAGTVGLMSVPVMGIAPESKAT-TESVYSAAL--ALGIANQLTNILRD 277
Query: 96 YLEDINEIPKCRMFWPRE 113
ED + R++ P+E
Sbjct: 278 VGEDAR---RGRIYLPQE 292
>sp|P08196|PSY1_SOLLC Phytoene synthase 1, chloroplastic OS=Solanum lycopersicum GN=PSY1
PE=1 SV=2
Length = 412
Score = 37.7 bits (86), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
Query: 46 DYDE---YCYYVAGLVGLGLSKLFYASGTEDLAPDSLSN---SMGLFLQKTNIIRDYLED 99
++DE YCYYVAG VGL + + +S+ N ++G+ Q TNI+RD ED
Sbjct: 232 NFDELYLYCYYVAGTVGLMSVPIMGIAPESKATTESVYNAALALGIANQLTNILRDVGED 291
Query: 100 INEIPKCRMFWPRE 113
+ R++ P++
Sbjct: 292 AR---RGRVYLPQD 302
>sp|P49085|PSY_MAIZE Phytoene synthase, chloroplastic OS=Zea mays GN=Y1 PE=3 SV=1
Length = 410
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 11/76 (14%)
Query: 45 DDYDE---YCYYVAGLVGLGLSKLFYASGTEDLAPD----SLSNSMGLFLQKTNIIRDYL 97
+++DE YCYYVAG VGL +S TE A S + ++G+ Q TNI+RD
Sbjct: 229 NNFDELYMYCYYVAGTVGL-MSVPVMGIATESKATTESVYSAALALGIANQLTNILRDVG 287
Query: 98 EDINEIPKCRMFWPRE 113
ED + R++ P++
Sbjct: 288 EDAR---RGRIYLPQD 300
>sp|P37272|PSY_CAPAN Phytoene synthase, chloroplastic OS=Capsicum annuum GN=PSY1 PE=2
SV=1
Length = 419
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
Query: 46 DYDE---YCYYVAGLVGLGLSKLFYASGTEDLAPDSLSN---SMGLFLQKTNIIRDYLED 99
++DE YCYYVAG VGL + + +S+ N ++G+ Q TNI+RD ED
Sbjct: 244 NFDELYLYCYYVAGTVGLMSVPIMGIAPESKATTESVYNAALALGIANQLTNILRDVGED 303
Query: 100 INEIPKCRMFWPRE 113
+ R++ P++
Sbjct: 304 AR---RGRVYLPQD 314
>sp|P37273|PSY2_SOLLC Phytoene synthase 2, chloroplastic (Fragment) OS=Solanum
lycopersicum GN=PSY2 PE=2 SV=1
Length = 310
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 45 DDYDE---YCYYVAGLVGLGLSKLFYASGTEDLAPDSLSN---SMGLFLQKTNIIRDYLE 98
+++DE YCYYVAG VGL + + +S+ N ++G+ Q TNI+RD E
Sbjct: 127 NNFDELYLYCYYVAGTVGLMSVPIMGIAPESKATTESVYNAALALGIANQLTNILRDVGE 186
Query: 99 DINEIPKCRMFWPRE 113
D + R++ P++
Sbjct: 187 DAR---RGRVYLPQD 198
>sp|P37270|CRTB_THET2 Phytoene synthase OS=Thermus thermophilus (strain HB27 / ATCC
BAA-163 / DSM 7039) GN=crtB PE=3 SV=1
Length = 289
Score = 37.0 bits (84), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 7/77 (9%)
Query: 50 YCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMF 109
YCY VAG VG ++ + A G ++ ++ + +G +Q TNI+RD ED+ + R++
Sbjct: 126 YCYQVAGTVGRMMAPI--AGGGKEA--EARAVKLGQAMQLTNILRDVGEDLE---RDRVY 178
Query: 110 WPREIWSKYVNKLEDLK 126
P ++ + ++EDL+
Sbjct: 179 LPLDLLRAHGVEVEDLR 195
>sp|P55350|Y4AC_RHISN Putative phytoene synthase OS=Rhizobium sp. (strain NGR234)
GN=NGR_a00440 PE=3 SV=1
Length = 279
Score = 36.2 bits (82), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 48 DEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCR 107
D YC VA VG ++F S + +A L++ +G LQ TNI+RD ED R
Sbjct: 122 DLYCDRVASAVGRMSVRVFGLSEEDGIA---LAHHLGRALQLTNILRDIDEDAG---LGR 175
Query: 108 MFWPRE 113
++ PRE
Sbjct: 176 LYIPRE 181
>sp|C3Y3G4|LIAS_BRAFL Lipoyl synthase, mitochondrial OS=Branchiostoma floridae
GN=BRAFLDRAFT_125969 PE=3 SV=1
Length = 376
Score = 35.0 bits (79), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 1 MDQFHHVSTAFLELGKGY---QDAIEDITKRMGAGMAKFICKEVESIDDYDEY 50
M F + + L+ G G Q+ E ITK G G+ FI EVES D +++Y
Sbjct: 7 MSTFTFIRCSVLKWGSGSSLPQEQKEKITK--GPGLGDFISGEVESTDSWEDY 57
>sp|P49293|PSY_CUCME Phytoene synthase, chloroplastic OS=Cucumis melo GN=PSY PE=2 SV=1
Length = 422
Score = 35.0 bits (79), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 10/116 (8%)
Query: 46 DYDE---YCYYVAGLVGLGLSKLFYASGTEDLAPDSLSN---SMGLFLQ-KTNIIRDYLE 98
++DE YCYYVAG VGL + + + +S+ N ++G+ Q NI+RD E
Sbjct: 248 NFDELYLYCYYVAGTVGLMSVPVMGIAPESQASTESVYNAALALGIANQAPPNILRDVGE 307
Query: 99 DINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLK 154
D + R++ P++ ++ ED+ +DK + + + A M ++ K
Sbjct: 308 DAR---RGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARMFFDEAEK 360
>sp|P65860|CRTB_MYCTU Probable phytoene synthase OS=Mycobacterium tuberculosis GN=crtB
PE=3 SV=1
Length = 302
Score = 35.0 bits (79), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Query: 46 DYDE---YCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINE 102
D+DE YC AG +G +F G A + +G+ LQ+TNI+RD ED
Sbjct: 117 DFDELIVYCRRGAGTIGKLCLSIF---GPVSTATSRYAEQLGIALQQTNILRDVREDFL- 172
Query: 103 IPKCRMFWPRE 113
R++ PR+
Sbjct: 173 --NGRIYLPRD 181
>sp|P65861|CRTB_MYCBO Probable phytoene synthase OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=crtB PE=3 SV=1
Length = 302
Score = 35.0 bits (79), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Query: 46 DYDE---YCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINE 102
D+DE YC AG +G +F G A + +G+ LQ+TNI+RD ED
Sbjct: 117 DFDELIVYCRRGAGTIGKLCLSIF---GPVSTATSRYAEQLGIALQQTNILRDVREDFL- 172
Query: 103 IPKCRMFWPRE 113
R++ PR+
Sbjct: 173 --NGRIYLPRD 181
>sp|O07333|CRTY_SPIPL Phytoene synthase OS=Spirulina platensis GN=crtB PE=3 SV=1
Length = 309
Score = 34.7 bits (78), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 12/68 (17%)
Query: 43 SIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLA-----------PDSLSNSMGLFLQKTN 91
+ D+ + YCY VAG VGL +S + DL+ P + ++G+ Q TN
Sbjct: 131 TFDELNLYCYRVAGTVGL-MSLAVMGTAEPDLSVPWNRDQSIYYPKEEAIALGIANQLTN 189
Query: 92 IIRDYLED 99
I+RD ED
Sbjct: 190 ILRDVGED 197
>sp|Q4L976|CRTM_STAHJ Dehydrosqualene synthase OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=crtM PE=3 SV=1
Length = 285
Score = 33.1 bits (74), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 49 EYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLED 99
+YCY VAG VG+ L + A+ D A + +G LQ TNI+RD ED
Sbjct: 126 DYCYGVAGTVGVLLIPIL-ATPPSDEAYE-YGKQLGEALQLTNILRDVGED 174
>sp|D4D802|LCPS_TRIVH Bifunctional lycopene cyclase/phytoene synthase OS=Trichophyton
verrucosum (strain HKI 0517) GN=TRV_03236 PE=3 SV=1
Length = 595
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 46 DYDEYCYYVAGLVGLGLSKLFY------ASGTEDLAPDSLSNSMGLFLQKTNIIRDYLED 99
D + Y Y+VAG + L +L + S +E L S MG LQ TNI RD + D
Sbjct: 429 DLEVYAYHVAGTIATLLLELVFRHHPVSISDSERLRVISAGEGMGRALQYTNIARDIVRD 488
>sp|B2TJ86|IOLD_CLOBB 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase OS=Clostridium
botulinum (strain Eklund 17B / Type B) GN=iolD PE=3 SV=1
Length = 643
Score = 32.3 bits (72), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 24/107 (22%)
Query: 86 FLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNA 145
L+K N I Y + EI +M W E+ KL ++KYEEN D ++ N
Sbjct: 356 LLEKENYISSYKD---EIKDAKMAWKEEM-----KKLTNIKYEENFDPIIKFRN------ 401
Query: 146 LMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGV 192
++ L+ L D I Q A+G + C +N + G
Sbjct: 402 ----KESLEEFKKLTD------TTITQTSALGLIRECIDNDAIIVGA 438
>sp|P37269|CRTB_SYNE7 Phytoene synthase OS=Synechococcus elongatus (strain PCC 7942)
GN=crtB PE=3 SV=2
Length = 308
Score = 32.0 bits (71), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 12/92 (13%)
Query: 43 SIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSN---------SMGLFLQKTNII 93
+ +D YCY VAG VGL + T AP + ++G+ Q TNI+
Sbjct: 131 TFEDLYTYCYRVAGTVGLMSQPVMGIESTNSRAPWDPTTPPDPTQEALALGIANQLTNIL 190
Query: 94 RDYLEDINEIPKCRMFWPREIWSKYVNKLEDL 125
RD ED + R++ P+E +++ +DL
Sbjct: 191 RDVGEDAR---RGRIYLPQEELAQFNYSEQDL 219
>sp|Q9UUQ6|LCPS_MUCCL Bifunctional lycopene cyclase/phytoene synthase OS=Mucor
circinelloides f. lusitanicus GN=CARRP PE=2 SV=1
Length = 614
Score = 32.0 bits (71), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Query: 40 EVESIDDYDEYCYY---VAGLVGLGLSKLFYASGTEDLAPDSL------SNSMGLFLQKT 90
E SI D ++ YY VA VG +++ A + + + MGL LQ T
Sbjct: 411 ERRSIRDQEDLRYYSACVASSVGEMCTRIILAHADKPASRQQTQWIIQRAREMGLVLQYT 470
Query: 91 NIIRDYLEDINEIPKCRM 108
NI RD + D E+ +C +
Sbjct: 471 NIARDIVTDSEELGRCYL 488
>sp|Q24331|TID_DROVI Protein tumorous imaginal discs, mitochondrial OS=Drosophila
virilis GN=l(2)tid PE=2 SV=1
Length = 529
Score = 32.0 bits (71), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 204 IDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRKSY 261
+ + N D+ A+Y+ + P NK+DP+A+K V + D KR+ Y
Sbjct: 87 VAKNANAKDIKKAYYELAKKYHPDTNKDDPDASKKFQDVSEAYEVLSDD---QKRREY 141
>sp|Q8R555|CRAC1_MOUSE Cartilage acidic protein 1 OS=Mus musculus GN=Crtac1 PE=2 SV=1
Length = 646
Score = 31.6 bits (70), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 184 NNIEVFRGVVKMRRGLTAKVIDRTNNMT-DVYLAFYDFSNILKPKINKNDPNATKTLSRV 242
+++ V RGV + G + +DRT + +Y+A Y + ++ + + DP A+ +
Sbjct: 164 DDVNVARGVASLFAGRSVACVDRTGSGRYSIYIANYAYGDVGPDALIEMDPEASDLSRGI 223
Query: 243 EAIQKACMDSGV 254
A++ ++GV
Sbjct: 224 LALRDVAAEAGV 235
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,814,138
Number of Sequences: 539616
Number of extensions: 4097467
Number of successful extensions: 10087
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 9994
Number of HSP's gapped (non-prelim): 57
length of query: 295
length of database: 191,569,459
effective HSP length: 117
effective length of query: 178
effective length of database: 128,434,387
effective search space: 22861320886
effective search space used: 22861320886
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)